RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CYB561D1 (Homo sapiens)

Ensembl gene IDs: ENSG00000174151

Ensembl transcript IDs: ENST00000310611.8, ENST00000369868.7, ENST00000393709.3, ENST00000420578.7, ENST00000430195.2, ENST00000496961.5, ENST00000527072.5, ENST00000528785.1, ENST00000533024.5

Found 954 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGGAGGGAGCGCACGCAGGCCCTGCAGCCCTCAAGCCCGGATCCTaGGGTGGGCTGAAGGAAGATCTTAGCTGGGCTAGGCAGCCCAGC +
Preference number: 1 (lower is better)
Translates to: GEGAHAGPAALKPGS*GGLKEDLSWARQPS
Trigger: GCTGGGCTGCCTAGCCCAGCTAAGATCTTCCTTCAGCCCACCTCAGGATCCGGGCTTGAGGGCTGCAGGGCCTGCGTGCGCTCCCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR CCA 90 bp ACCCTGGCTGCCCGGGGACAAAGGAGGCAGAGCCCACACAGTGCCTaGACAGCAGTGGCCAGCAGTGTCAGGGCTCCCACCCAGCTGTGC +
Preference number: 1 (lower is better)
Translates to: TLAARGQRRQSPHSA*TAVASSVRAPTQLC
Trigger: GCACAGCTGGGTGGGAGCCCTGACACTGCTGGCCACTGCTGTCCAGGCACTGTGTGGGCTCTGCCTCCTTTGTCCCCGGGCAGCCAGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
3UTR TCA 90 bp CGCACGCAGGCCCTGCAGCCCTCAAGCCCGGATCCTGAGGTGGGCTaGAGGAAGATCTTAGCTGGGCTAGGCAGCCCAGCCAGCAGCCTT +
Preference number: 1 (lower is better)
Translates to: RTQALQPSSPDPEVG*RKILAGLGSPASSL
Trigger: AAGGCTGCTGGCTGGGCTGCCTAGCCCAGCTAAGATCTTCCTTCAGCCCACCTCAGGATCCGGGCTTGAGGGCTGCAGGGCCTGCGTGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR TCA 90 bp GCCCTAAGAAGGGCAAAGCATGAGATGCCTGGGGCTCCTTTGCCCTaGGAAGTGATTTCGGGGGAGGGAGCGCACGCAGGCCCTGCAGCC +
Preference number: 1 (lower is better)
Translates to: ALRRAKHEMPGAPLP*EVISGEGAHAGPAA
Trigger: GGCTGCAGGGCCTGCGTGCGCTCCCTCCCCCGAAATCACTTCTCAGGGCAAAGGAGCCCCAGGCATCTCATGCTTTGCCCTTCTTAGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR TCA 90 bp ACCAGACCTACAGCAGCCATGCACGGGGGTGGAAGGGTGGGACGATaGGAAAGAAGGGATGGGCCAGTGAGTGCGGAAGGGCAGCCTGCC +
Preference number: 1 (lower is better)
Translates to: TRPTAAMHGGGRVGR*ERRDGPVSAEGQPA
Trigger: GGCAGGCTGCCCTTCCGCACTCACTGGCCCATCCCTTCTTTCTCATCGTCCCACCCTTCCACCCCCGTGCATGGCTGCTGTAGGTCTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR CCA 90 bp GGATGGGCCAGTGAGTGCGGAAGGGCAGCCTGCCTTGTGAAAGGGTaGGGAGAGAGGAGGCCCAGGCTGGCAAGTGGTAACAGCCTACCA +
Preference number: 1 (lower is better)
Translates to: GWASECGRAACLVKG*GERRPRLASGNSLP
Trigger: TGGTAGGCTGTTACCACTTGCCAGCCTGGGCCTCCTCTCTCCCCACCCTTTCACAAGGCAGGCTGCCCTTCCGCACTCACTGGCCCATCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR TCA 90 bp CACCAGTCCACATGTCAGATGGTAGAGCTTGAGGCGAGCCACCCTTaGGACCCTGGCTGCCCGGGGACAAAGGAGGCAGAGCCCACACAG +
Preference number: 1 (lower is better)
Translates to: HQSTCQMVELEASHP*DPGCPGTKEAEPTQ
Trigger: CTGTGTGGGCTCTGCCTCCTTTGTCCCCGGGCAGCCAGGGTCTCAAGGGTGGCTCGCCTCAAGCTCTACCATCTGACATGTGGACTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
3UTR TCA 90 bp CTGGGAGCCACTGAGATCCCAGCTGGAGGAAGAGTGCCCTGGCACTaGGGTCTAATGGCTGTCCAGCTGCTGCCCCAGGATGTGAGGGCA +
Preference number: 1 (lower is better)
Translates to: LGATEIPAGGRVPWH*GLMAVQLLPQDVRA
Trigger: TGCCCTCACATCCTGGGGCAGCAGCTGGACAGCCATTAGACCTCAGTGCCAGGGCACTCTTCCTCCAGCTGGGATCTCAGTGGCTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR GCA 90 bp ATCCAGTCCTCACCACCGAGGGCAGCCTGGGGAACTACTTTCAGCTaGAGCAAGGAGCGGGGTGGTCTCTGGAGGGAAGAGAGTCCAGCC +
Preference number: 1 (lower is better)
Translates to: IQSSPPRAAWGTTFS*SKERGGLWREESPA
Trigger: GGCTGGACTCTCTTCCCTCCAGAGACCACCCCGCTCCTTGCTGCAGCTGAAAGTAGTTCCCCAGGCTGCCCTCGGTGGTGAGGACTGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR GCA 90 bp GGGTGGAAGGGTGGGACGATGAGAAAGAAGGGATGGGCCAGTGAGTaGGGAAGGGCAGCCTGCCTTGTGAAAGGGTGGGGAGAGAGGAGG +
Preference number: 1 (lower is better)
Translates to: GWKGGTMRKKGWASE*GRAACLVKGWGERR
Trigger: CCTCCTCTCTCCCCACCCTTTCACAAGGCAGGCTGCCCTTCCGCACTCACTGGCCCATCCCTTCTTTCTCATCGTCCCACCCTTCCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR GCA 90 bp ATGATGAAGCCCAGGCCCAGAGCTGCACAGAGGATGGCTAGGGTCTaGCCTGCCCAGTGGAGCCGGATCCGTGCTTTTCGGGAGCAGAAG +
Preference number: 1 (lower is better)
Translates to: MMKPRPRAAQRMARV*PAQWSRIRAFREQK
Trigger: CTTCTGCTCCCGAAAAGCACGGATCCGGCTCCACTGGGCAGGGCAGACCCTAGCCATCCTCTGTGCAGCTCTGGGCCTGGGCTTCATCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
3UTR CCA 90 bp GAGGGCAGCCTGGGGAACTACTTTCAGCTGCAGCAAGGAGCGGGGTaGTCTCTGGAGGGAAGAGAGTCCAGCCCTCATTTGCCAGCTGGC +
Preference number: 1 (lower is better)
Translates to: EGSLGNYFQLQQGAG*SLEGRESSPHLPAG
Trigger: GCCAGCTGGCAAATGAGGGCTGGACTCTCTTCCCTCCAGAGACCACCCCGCTCCTTGCTGCAGCTGAAAGTAGTTCCCCAGGCTGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR CCA 90 bp AGAGGATGGCGGAGGAGGGAACACACAAGCAGGAGCCCATGCAGCTaGGAGCCACTGAGATCCCAGCTGGAGGAAGAGTGCCCTGGCACT +
Preference number: 1 (lower is better)
Translates to: RGWRRREHTSRSPCS*EPLRSQLEEECPGT
Trigger: AGTGCCAGGGCACTCTTCCTCCAGCTGGGATCTCAGTGGCTCCCAGCTGCATGGGCTCCTGCTTGTGTGTTCCCTCCTCCGCCATCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR CCA 90 bp ACAGCTCAGCAGTCTAGCATCCAGTCCTCACCACCGAGGGCAGCCTaGGGAACTACTTTCAGCTGCAGCAAGGAGCGGGGTGGTCTCTGG +
Preference number: 1 (lower is better)
Translates to: TAQQSSIQSSPPRAA*GTTFSCSKERGGLW
Trigger: CCAGAGACCACCCCGCTCCTTGCTGCAGCTGAAAGTAGTTCCCCAGGCTGCCCTCGGTGGTGAGGACTGGATGCTAGACTGCTGAGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR GCA 90 bp AAGGAGCGGGGTGGTCTCTGGAGGGAAGAGAGTCCAGCCCTCATTTaGCAGCTGGCACCAAACTCAGCCCCCTCTTGGACCAAAGAGCTG +
Preference number: 1 (lower is better)
Translates to: KERGGLWREESPALI*QLAPNSAPSWTKEL
Trigger: CAGCTCTTTGGTCCAAGAGGGGGCTGAGTTTGGTGCCAGCTGGCAAATGAGGGCTGGACTCTCTTCCCTCCAGAGACCACCCCGCTCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR CCA 90 bp GGGGTGGTCTCTGGAGGGAAGAGAGTCCAGCCCTCATTTGCCAGCTaGCACCAAACTCAGCCCCCTCTTGGACCAAAGAGCTGGGAAGAG +
Preference number: 1 (lower is better)
Translates to: GVVSGGKRVQPSFAS*HQTQPPLGPKSWEE
Trigger: CTCTTCCCAGCTCTTTGGTCCAAGAGGGGGCTGAGTTTGGTGCCAGCTGGCAAATGAGGGCTGGACTCTCTTCCCTCCAGAGACCACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR CCA 90 bp GCCTGGGGAACTACTTTCAGCTGCAGCAAGGAGCGGGGTGGTCTCTaGAGGGAAGAGAGTCCAGCCCTCATTTGCCAGCTGGCACCAAAC +
Preference number: 1 (lower is better)
Translates to: AWGTTFSCSKERGGL*REESPALICQLAPN
Trigger: GTTTGGTGCCAGCTGGCAAATGAGGGCTGGACTCTCTTCCCTCCAGAGACCACCCCGCTCCTTGCTGCAGCTGAAAGTAGTTCCCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR TCA 90 bp ACTGGAGCTCCAGCGCCTACATCCCAGGCTTCCCAGAGTTCCCTGTaGGCTATGTCGACTTGCCTCAGCAGCACTTTCCTGGCTCAGCTG +
Preference number: 1 (lower is better)
Translates to: TGAPAPTSQASQSSL*AMSTCLSSTFLAQL
Trigger: CAGCTGAGCCAGGAAAGTGCTGCTGAGGCAAGTCGACATAGCTCACAGGGAACTCTGGGAAGCCTGGGATGTAGGCGCTGGAGCTCCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR TCA 90 bp GAAAAGAGGGGGAGGGAAGTCCCTCCACAATCCGGCCTGCCAGGATaGAGGGCTCCTCCTGGTGACCTATTCCCTACACTGCAGTCAGAC +
Preference number: 1 (lower is better)
Translates to: EKRGREVPPQSGLPG*RAPPGDLFPTLQSD
Trigger: GTCTGACTGCAGTGTAGGGAATAGGTCACCAGGAGGAGCCCTTCATCCTGGCAGGCCGGATTGTGGAGGGACTTCCCTCCCCCTCTTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR TCA 90 bp GTTACACTCTGCAGCCCAGGAAGGAGGGGGAAGGTGAGGGCTGACTaGCTCAGCCTGCAAGTGCTTAGAGATCTGAAGCTGAAAGGCCCC +
Preference number: 1 (lower is better)
Translates to: VTLCSPGRRGKVRAD*LSLQVLRDLKLKGP
Trigger: GGGGCCTTTCAGCTTCAGATCTCTAAGCACTTGCAGGCTGAGTCAGTCAGCCCTCACCTTCCCCCTCCTTCCTGGGCTGCAGAGTGTAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR GCA 90 bp AGACCAAGGACATCCACAACACTAACATCTAGGAACACCTGCCCCTaGTCCTGGGAACTGGAGCTCCAGCGCCTACATCCCAGGCTTCCC +
Preference number: 1 (lower is better)
Translates to: RPRTSTTLTSRNTCP*SWELELQRLHPRLP
Trigger: GGGAAGCCTGGGATGTAGGCGCTGGAGCTCCAGTTCCCAGGAGCAGGGGCAGGTGTTCCTAGATGTTAGTGTTGTGGATGTCCTTGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR GCA 90 bp GAGAAATGGAAAAGAGGGGGAGGGAAGTCCCTCCACAATCCGGCCTaGCAGGATGAAGGGCTCCTCCTGGTGACCTATTCCCTACACTGC +
Preference number: 1 (lower is better)
Translates to: EKWKRGGGKSLHNPA*QDEGLLLVTYSLHC
Trigger: GCAGTGTAGGGAATAGGTCACCAGGAGGAGCCCTTCATCCTGGCAGGCCGGATTGTGGAGGGACTTCCCTCCCCCTCTTTTCCATTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR GCA 90 bp GCCAACCAGACACAGGAGCATCAAGAGCACTACCAGAAGCCTCCCTaGTCTCTGAGCTTGCAGAGGGGACCCAGAAATGCTGGGCTTGAG +
Preference number: 1 (lower is better)
Translates to: ANQTQEHQEHYQKPP*SLSLQRGPRNAGLE
Trigger: CTCAAGCCCAGCATTTCTGGGTCCCCTCTGCAAGCTCAGAGAGCAGGGAGGCTTCTGGTAGTGCTCTTGATGCTCCTGTGTCTGGTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR CCA 90 bp AGAGGACTCAGTGCCCACTCCCAGACGAGAAGTCACTGCAAGGCGTaGCTAGCAGCAAGATTCCTGACTTCCTTCCCACAGTGCCTTCCC +
Preference number: 1 (lower is better)
Translates to: RGLSAHSQTRSHCKA*LAARFLTSFPQCLP
Trigger: GGGAAGGCACTGTGGGAAGGAAGTCAGGAATCTTGCTGCTAGCCACGCCTTGCAGTGACTTCTCGTCTGGGAGTGGGCACTGAGTCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR GCA 90 bp AGACCCTCACCTGAGTCCCTTCTTTCCACAGTGCCTGACCCCCTGTaGCCTGGCACAGGGACCAAATCAGCACAAATTTCTGAAGGGCCT +
Preference number: 1 (lower is better)
Translates to: RPSPESLLSTVPDPL*PGTGTKSAQISEGP
Trigger: AGGCCCTTCAGAAATTTGTGCTGATTTGGTCCCTGTGCCAGGGCACAGGGGGTCAGGCACTGTGGAAAGAAGGGACTCAGGTGAGGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR CCA 90 bp AGGACATCCACAACACTAACATCTAGGAACACCTGCCCCTGCTCCTaGGAACTGGAGCTCCAGCGCCTACATCCCAGGCTTCCCAGAGTT +
Preference number: 1 (lower is better)
Translates to: RTSTTLTSRNTCPCS*ELELQRLHPRLPRV
Trigger: AACTCTGGGAAGCCTGGGATGTAGGCGCTGGAGCTCCAGTTCCCAGGAGCAGGGGCAGGTGTTCCTAGATGTTAGTGTTGTGGATGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR TCA 90 bp GCACAGGTACCAGGCCGCACCTTTGATCTGGGCCTGGAACCATACTaGGTACATGCCCAGAAGCACCGTTACTGTAGCCATCAGGTAGAC +
Preference number: 1 (lower is better)
Translates to: AQVPGRTFDLGLEPY*VHAQKHRYCSHQVD
Trigger: GTCTACCTGATGGCTACAGTAACGGTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGGTGCGGCCTGGTACCTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
3UTR TCA 90 bp GCCTCAGCAGCACTTTCCTGGCTCAGCTGTTGTCAGGCCTTGCCATaGTCTAGGGAGATCCTATCTTCTCAACTGAGCCCAGACCACAGC +
Preference number: 1 (lower is better)
Translates to: ASAALSWLSCCQALP*SREILSSQLSPDHS
Trigger: GCTGTGGTCTGGGCTCAGTTGAGAAGATAGGATCTCCCTAGATCATGGCAAGGCCTGACAACAGCTGAGCCAGGAAAGTGCTGCTGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR TCA 90 bp AGACACAGGAGCATCAAGAGCACTACCAGAAGCCTCCCTGCTCTCTaGGCTTGCAGAGGGGACCCAGAAATGCTGGGCTTGAGGCATCAA +
Preference number: 1 (lower is better)
Translates to: RHRSIKSTTRSLPAL*ACRGDPEMLGLRHQ
Trigger: TTGATGCCTCAAGCCCAGCATTTCTGGGTCCCCTCTGCAAGCTCAGAGAGCAGGGAGGCTTCTGGTAGTGCTCTTGATGCTCCTGTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR GCA 90 bp TTCAGAAGACCAAGGACATCCACAACACTAACATCTAGGAACACCTaGCCCTGCTCCTGGGAACTGGAGCTCCAGCGCCTACATCCCAGG +
Preference number: 1 (lower is better)
Translates to: FRRPRTSTTLTSRNT*PCSWELELQRLHPR
Trigger: CCTGGGATGTAGGCGCTGGAGCTCCAGTTCCCAGGAGCAGGGGCAGGTGTTCCTAGATGTTAGTGTTGTGGATGTCCTTGGTCTTCTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR GCA 90 bp AAGGAAGGGCAGGAGTACTGGAAGTTCAGGCTCAACAGCCACCCCTaGCACCACCATAGGTCTCAGCCTAGCATACACTGTGTTCCCTAC +
Preference number: 1 (lower is better)
Translates to: KEGQEYWKFRLNSHP*HHHRSQPSIHCVPY
Trigger: GTAGGGAACACAGTGTATGCTAGGCTGAGACCTATGGTGGTGGCAGGGGTGGCTGTTGAGCCTGAACTTCCAGTACTCCTGCCCTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR GCA 90 bp AGTTTACTGAGAGGACTCAGTGCCCACTCCCAGACGAGAAGTCACTaGAAGGCGTGGCTAGCAGCAAGATTCCTGACTTCCTTCCCACAG +
Preference number: 1 (lower is better)
Translates to: SLLRGLSAHSQTRSH*KAWLAARFLTSFPQ
Trigger: CTGTGGGAAGGAAGTCAGGAATCTTGCTGCTAGCCACGCCTTGCAGTGACTTCTCGTCTGGGAGTGGGCACTGAGTCCTCTCAGTAAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR TCA 90 bp TTTCCATTTTCTTCCTCGGCAAGTAGGATCTGGAAATCTGGTGCATaGTCACCAGGGCTGGATAGACGGGCAGTGCCAGGCACAGGTACC +
Preference number: 1 (lower is better)
Translates to: FPFSSSASRIWKSGA*SPGLDRRAVPGTGT
Trigger: GGTACCTGTGCCTGGCACTGCCCGTCTATCCAGCCCTGGTGATCATGCACCAGATTTCCAGATCCTACTTGCCGAGGAAGAAAATGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
3UTR GCA 90 bp GAGCAAGGACAAAAGGGCAACCATGTGCTTCTCCTCCAAGGCGTTTaGTTCCTTGCTGAGGAGCCAAGTGAATACCCCAGACATGAGCAG +
Preference number: 1 (lower is better)
Translates to: EQGQKGNHVLLLQGV*FLAEEPSEYPRHEQ
Trigger: CTGCTCATGTCTGGGGTATTCACTTGGCTCCTCAGCAAGGAAGCAAACGCCTTGGAGGAGAAGCACATGGTTGCCCTTTTGTCCTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR GCA 90 bp CCCCAAGCTGATGCACCTTTCATTTCATGTTACACAGGATCTTTGTaGCAACCAGACACAGGAGCATCAAGAGCACTACCAGAAGCCTCC +
Preference number: 1 (lower is better)
Translates to: PQADAPFISCYTGSL*QPDTGASRALPEAS
Trigger: GGAGGCTTCTGGTAGTGCTCTTGATGCTCCTGTGTCTGGTTGGCACAAAGATCCTGTGTAACATGAAATGAAAGGTGCATCAGCTTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR CCA 90 bp AAAGTTGTTTTTCACTTCAGGAGGAACAACCAAGGTGACGAGGGGTaGAGCTACTGCACAACCAGCCACATCAGACAAGTCAACCTTGGC +
Preference number: 1 (lower is better)
Translates to: KVVFHFRRNNQGDEG*SYCTTSHIRQVNLG
Trigger: GCCAAGGTTGACTTGTCTGATGTGGCTGGTTGTGCAGTAGCTCCACCCCTCGTCACCTTGGTTGTTCCTCCTGAAGTGAAAAACAACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528785.1
3UTR CCA 90 bp ACATCCTCACCACCTCCCCCAAACCACAAGAAGTTCCTTAGATTCTaGCCAAGATGTGCAATTTTGTCTGCCATGCCTTGCAGCACTTAC +
Preference number: 1 (lower is better)
Translates to: TSSPPPPNHKKFLRF*PRCAILSAMPCSTY
Trigger: GTAAGTGCTGCAAGGCATGGCAGACAAAATTGCACATCTTGGCCAGAATCTAAGGAACTTCTTGTGGTTTGGGGGAGGTGGTGAGGATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528785.1
3UTR CCA 90 bp AGTCTGATGAGGACTACTTGGAGTTTGGAGTTCTCTCTTCTGTTTTaGCCTGTGCCAAGCCCAAGGAAGTCCATGGCTGCATCTCTTCAA +
Preference number: 1 (lower is better)
Translates to: SLMRTTWSLEFSLLF*PVPSPRKSMAASLQ
Trigger: TTGAAGAGATGCAGCCATGGACTTCCTTGGGCTTGGCACAGGCCAAAACAGAAGAGAGAACTCCAAACTCCAAGTAGTCCTCATCAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528785.1
3UTR CCA 90 bp GACAGGATGAAGCTGATAAGGAGAGCAAGTCTGATGAGGACTACTTaGAGTTTGGAGTTCTCTCTTCTGTTTTGGCCTGTGCCAAGCCCA +
Preference number: 1 (lower is better)
Translates to: DRMKLIRRASLMRTT*SLEFSLLFWPVPSP
Trigger: TGGGCTTGGCACAGGCCAAAACAGAAGAGAGAACTCCAAACTCCAAGTAGTCCTCATCAGACTTGCTCTCCTTATCAGCTTCATCCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528785.1
3UTR TCA 90 bp CCTACATATCTTGACCTTTGTCAGGTGCAAGTCTTATTAGTTTACTaGGAGGACTCAGTGCCCACTCCCAGACGAGAAGTCACTGCAAGG +
Preference number: 1 (lower is better)
Translates to: PTYLDLCQVQVLLVY*EDSVPTPRREVTAR
Trigger: CCTTGCAGTGACTTCTCGTCTGGGAGTGGGCACTGAGTCCTCTCAGTAAACTAATAAGACTTGCACCTGACAAAGGTCAAGATATGTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR CCA 90 bp GAATACTTACCTAAAGTCTTGACCGAAGGGCAGCCCTCCTCTATTTaGAAAGTTGTTTTTCACTTCAGGAGGAACAACCAAGGTGACGAG +
Preference number: 1 (lower is better)
Translates to: EYLPKVLTEGQPSSI*KVVFHFRRNNQGDE
Trigger: CTCGTCACCTTGGTTGTTCCTCCTGAAGTGAAAAACAACTTTCCAAATAGAGGAGGGCTGCCCTTCGGTCAAGACTTTAGGTAAGTATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528785.1
3UTR-3UTR CCA 90 bp CAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCAGCCCGTCTGCCCTGCCCAGTaGAGCCGGATCCGTGCTTTT +
Preference number: 2 (lower is better)
Translates to: QPTQTAGCQHACPPAHQPVCPAQ*SRIRAF
Trigger: AAAAGCACGGATCCGGCTCCACTGGGCAGGGCAGAC...GGGCTGGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR GCA 90 bp GCACAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCAGAGGAACACCTGCCCCTaGTCCTGGGAACTGGAGCTC +
Preference number: 2 (lower is better)
Translates to: AQPTQTAGCQHACPPAHQRNTCP*SWELEL
Trigger: GAGCTCCAGTTCCCAGGAGCAGGGGCAGGTGTTCCT...CTGGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR GCA 90 bp TGGCACAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCAGGAACACCTGCCCCTaGTCCTGGGAACTGGAGCTC +
Preference number: 2 (lower is better)
Translates to: WHSPRKLPAVSTPARPPTRNTCP*SWELEL
Trigger: GAGCTCCAGTTCCCAGGAGCAGGGGCAGGTGTTCCT...GGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTGTGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR CCA 90 bp AACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCAGCCCCCGCACCACCTCATGATCACCAGGGCTaGATAGACGGGCAGTGCCAG +
Preference number: 2 (lower is better)
Translates to: NCRLSARLPARPPAPAPPHDHQG*IDGQCQ
Trigger: CTGGCACTGCCCGTCTATCCAGCCCTGGTGATCATG...AGGTGGTGCGGGGGCTGGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR GCA 90 bp GCACAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCAGGGGCAAAGCATGAGATaGCTGGGGCTCCTTTGCCCT +
Preference number: 2 (lower is better)
Translates to: AQPTQTAGCQHACPPAHQGQSMR*LGLLCP
Trigger: AGGGCAAAGGAGCCCCAGGCATCTCATGCTTTGCCC...CTGGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR CCA 90 bp AAACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCAGCCCCCGCACCACCCAGCAGCCTTCGGCTTaGTTAAGCCAATGCCCTCCT +
Preference number: 2 (lower is better)
Translates to: KLPAVSTPARPPTSPRTTQQPSA*LSQCPP
Trigger: AGGAGGGCATTGGCTTAACCAAGCCGAAGGCTGCTG...GGTGGTGCGGGGGCTGGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR TCA 90 bp CAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCAGCCCTCCTATCTTCTCAACTaGGCCCAGACCACAGCTCAG +
Preference number: 2 (lower is better)
Translates to: QPTQTAGCQHACPPAHQPSYLLN*AQTTAQ
Trigger: CTGAGCTGTGGTCTGGGCTCAGTTGAGAAGATAGGA...GGGCTGGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR GCA 90 bp CAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCAGCCCGCTGTTGTCAGGCCTTaGCATGATCTAGGGAGATCC +
Preference number: 2 (lower is better)
Translates to: QPTQTAGCQHACPPAHQPAVVRP*HDLGRS
Trigger: GGATCTCCCTAGATCATGGCAAGGCCTGACAACAGC...GGGCTGGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR GCA 90 bp TGGCACAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCGGAACAATACCCCTCTaGACAGCAGGGGCCTCCTTT +
Preference number: 2 (lower is better)
Translates to: WHSPRKLPAVSTPARPPTGTIPL*TAGASF
Trigger: AAAGGAGGCCCCTGCTGTGCAGAGGGGTATTGTTCC...GGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTGTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR CCA 90 bp CAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCAGCCCGTGAGAAGAGTAGGATaGCTTCAGCCATGCAGAGGC +
Preference number: 2 (lower is better)
Translates to: QPTQTAGCQHACPPAHQPVRRVG*LQPCRG
Trigger: GCCTCTGCATGGCTGAAGCCATCCTACTCTTCTCAC...GGGCTGGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496961.5
3UTR-3UTR GCA 90 bp TGGCACAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCAGCAGCTTTGGTTTCTaGAGTCCCTGGACCAGCCAA +
Preference number: 2 (lower is better)
Translates to: WHSPRKLPAVSTPARPPTSSFGF*SPWTSQ
Trigger: TTGGCTGGTCCAGGGACTGCAGAAACCAAAGCTGCT...GGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTGTGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR TCA 90 bp ATGGCTAGGGTCTGCCCTGCCCAGTGGAGCCGGATCCGTGCTTTTCGGGAGCAGTGCCAGGACACCAGATaGGGCAGCTCACTGCGGGTC +
Preference number: 2 (lower is better)
Translates to: MARVCPAQWSRIRAFREQCQDTR*GSSLRV
Trigger: GACCCGCAGTGAGCTGCCTCATCTGGTGTCCTGGCA...CTGCTCCCGAAAAGCACGGATCCGGCTCCACTGGGCAGGGCAGACCCTAGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
3UTR-3UTR TCA 90 bp TGGCACAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCTGGAAATCTGGTGCATaGTCACCAGGGCTGGATAGA +
Preference number: 2 (lower is better)
Translates to: WHSPRKLPAVSTPARPPTWKSGA*SPGLDR
Trigger: TCTATCCAGCCCTGGTGATCATGCACCAGATTTCCA...GGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTGTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR TCA 90 bp CTGCCCCTGCTCCTGGGAACTGGAGCTCCAGCGCCTACATCCCAGGCTTCCCAGGGGGCTCCTTTGCCCTaGGAAGTGATTTCGGGGGAG +
Preference number: 2 (lower is better)
Translates to: LPLLLGTGAPAPTSQASQGAPLP*EVISGE
Trigger: CTCCCCCGAAATCACTTCTCAGGGCAAAGGAGCCCC...CTGGGAAGCCTGGGATGTAGGCGCTGGAGCTCCAGTTCCCAGGAGCAGGGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR CCA 90 bp GGGGAGGGAAGTCCCTCCACAATCCGGCCTGCCAGGATGAAGGGCTCCTCCTGGCCACCGAGGGCAGCCTaGGGAACTACTTTCAGCTGC +
Preference number: 2 (lower is better)
Translates to: GEGSPSTIRPARMKGSSWPPRAA*GTTFSC
Trigger: GCAGCTGAAAGTAGTTCCCCAGGCTGCCCTCGGTGG...CCAGGAGGAGCCCTTCATCCTGGCAGGCCGGATTGTGGAGGGACTTCCCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR CCA 90 bp GGGGGAGGGAAGTCCCTCCACAATCCGGCCTGCCAGGATGAAGGGCTCCTCCTGCTGGTGAACTTTGCCTaGCCCTCCTACCCTGCGGCA +
Preference number: 2 (lower is better)
Translates to: GGGKSLHNPACQDEGLLLLVNFA*PSYPAA
Trigger: TGCCGCAGGGTAGGAGGGCCAGGCAAAGTTCACCAG...CAGGAGGAGCCCTTCATCCTGGCAGGCCGGATTGTGGAGGGACTTCCCTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR TCA 90 bp CTGCCCCTGCTCCTGGGAACTGGAGCTCCAGCGCCTACATCCCAGGCTTCCCAGACCAGGCCGCACCTTTaGTCTGGGCCTGGAACCATA +
Preference number: 2 (lower is better)
Translates to: LPLLLGTGAPAPTSQASQTRPHL*SGPGTI
Trigger: TATGGTTCCAGGCCCAGATCAAAGGTGCGGCCTGGT...CTGGGAAGCCTGGGATGTAGGCGCTGGAGCTCCAGTTCCCAGGAGCAGGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR GCA 90 bp CTTAGCTGGGCTAGGCAGCCCAGCCAGCAGCCTTCGGCTTGGTTAAGCCAATGCAGGATGGCTAGGGTCTaGCCTGCCCAGTGGAGCCGG +
Preference number: 2 (lower is better)
Translates to: LSWARQPSQQPSAWLSQCRMARV*PAQWSR
Trigger: CCGGCTCCACTGGGCAGGGCAGACCCTAGCCATCCT...GCATTGGCTTAACCAAGCCGAAGGCTGCTGGCTGGGCTGCCTAGCCCAGCTAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR TCA 90 bp GGGGAGGGAAGTCCCTCCACAATCCGGCCTGCCAGGATGAAGGGCTCCTCCTGGGATCCTGAGGTGGGCTaGAGGAAGATCTTAGCTGGG +
Preference number: 2 (lower is better)
Translates to: GEGSPSTIRPARMKGSSWDPEVG*RKILAG
Trigger: CCCAGCTAAGATCTTCCTTCAGCCCACCTCAGGATC...CCAGGAGGAGCCCTTCATCCTGGCAGGCCGGATTGTGGAGGGACTTCCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR TCA 90 bp AACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCAGCCCCCGCACCACCTCTGTCCCCATACTATTaGATCAAACCAACCTCCTTA +
Preference number: 2 (lower is better)
Translates to: NCRLSARLPARPPAPAPPLSPYY*IKPTSL
Trigger: TAAGGAGGTTGGTTTGATTCAATAGTATGGGGACAG...AGGTGGTGCGGGGGCTGGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR GCA 90 bp GGGGGAGGGAAGTCCCTCCACAATCCGGCCTGCCAGGATGAAGGGCTCCTCCTGGGATCAGAAAAGCCCTaGCCCACTTCCTTGGCCCTT +
Preference number: 2 (lower is better)
Translates to: GGGKSLHNPACQDEGLLLGSEKP*PTSLAL
Trigger: AAGGGCCAAGGAAGTGGGGCAGGGCTTTTCTGATCC...CAGGAGGAGCCCTTCATCCTGGCAGGCCGGATTGTGGAGGGACTTCCCTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR TCA 90 bp GGGGAGGGAAGTCCCTCCACAATCCGGCCTGCCAGGATGAAGGGCTCCTCCTGGAAGAAGGGCAAAGCATaGGATGCCTGGGGCTCCTTT +
Preference number: 2 (lower is better)
Translates to: GEGSPSTIRPARMKGSSWKKGKA*DAWGSF
Trigger: AAAGGAGCCCCAGGCATCTCATGCTTTGCCCTTCTT...CCAGGAGGAGCCCTTCATCCTGGCAGGCCGGATTGTGGAGGGACTTCCCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR GCA 90 bp CTTAGCTGGGCTAGGCAGCCCAGCCAGCAGCCTTCGGCTTGGTTAAGCCAATGCTGGATAGACGGGCAGTaGCAGGCACAGGTACCAGGC +
Preference number: 2 (lower is better)
Translates to: LSWARQPSQQPSAWLSQCWIDGQ*QAQVPG
Trigger: GCCTGGTACCTGTGCCTGGCACTGCCCGTCTATCCA...GCATTGGCTTAACCAAGCCGAAGGCTGCTGGCTGGGCTGCCTAGCCCAGCTAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR CCA 90 bp GCATCCAGTCCTCACCACCGAGGGCAGCCTGGGGAACTACTTTCAGCTGCAGCACAGCAAGGAGCGGGGTaGTCTCTGGAGGGAAGAGAG +
Preference number: 2 (lower is better)
Translates to: ASSPHHRGQPGELLSAAAQQGAG*SLEGRE
Trigger: CTCTCTTCCCTCCAGAGACCACCCCGCTCCTTGCTG...TGCTGCAGCTGAAAGTAGTTCCCCAGGCTGCCCTCGGTGGTGAGGACTGGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR CAA 90 bp CAAGGAGCGGGGTGGTCTCTGGAGGGAAGAGAGTCCAGCCCTCATTaGCCAGCTGGCACCAAACTCAGCCCCCTCTTGGACCAAAGAGCT +
Preference number: 2 (lower is better)
Translates to: QGAGWSLEGRESSPH*PAGTKLSPLLDQRA
Trigger: AGCTCTTTGGTCCAAGAGGGGGCTGAGTTTGGTGCCAGCTGGCAAATGAGGGCTGGACTCTCTTCCCTCCAGAGACCACCCCGCTCCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR TCA 90 bp CCTGCTCCTGGGAACTGGAGCTCCAGCGCCTACATCCCAGGCTTCCCAGAGTTCGCTGGGAGAGTGTTCTaGGACATCGACCTGACAGAC +
Preference number: 2 (lower is better)
Translates to: PAPGNWSSSAYIPGFPEFAGRVF*DIDLTD
Trigger: GTCTGTCAGGTCGATGTCTCAGAACACTCTCCCAGC...GAACTCTGGGAAGCCTGGGATGTAGGCGCTGGAGCTCCAGTTCCCAGGAGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR TCA 90 bp GCATCCAGTCCTCACCACCGAGGGCAGCCTGGGGAACTACTTTCAGCTGCAGCACTCAAGCCCGGATCCTaGGGTGGGCTGAAGGAAGAT +
Preference number: 2 (lower is better)
Translates to: ASSPHHRGQPGELLSAAALKPGS*GGLKED
Trigger: ATCTTCCTTCAGCCCACCTCAGGATCCGGGCTTGAG...TGCTGCAGCTGAAAGTAGTTCCCCAGGCTGCCCTCGGTGGTGAGGACTGGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR GCA 90 bp CTGCCCCTGCTCCTGGGAACTGGAGCTCCAGCGCCTACATCCCAGGCTTCCCAGGGACCAGCCAAGAAGTaGGAAAACCTGACCACTTCT +
Preference number: 2 (lower is better)
Translates to: LPLLLGTGAPAPTSQASQGPAKK*ENLTTS
Trigger: AGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCC...CTGGGAAGCCTGGGATGTAGGCGCTGGAGCTCCAGTTCCCAGGAGCAGGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR GCA 90 bp GCCAACCAGACACAGGAGCATCAAGAGCACTACCAGAAGCCTCCCTGCTCTCTGGTGCCTGACCCCCTGTaGCCTGGCACAGGGACCAAA +
Preference number: 2 (lower is better)
Translates to: ANQTQEHQEHYQKPPCSLVPDPL*PGTGTK
Trigger: TTTGGTCCCTGTGCCAGGGCACAGGGGGTCAGGCAC...CAGAGAGCAGGGAGGCTTCTGGTAGTGCTCTTGATGCTCCTGTGTCTGGTTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR-3UTR CCA 90 bp ATCAAGACCAGGGGTGCCCCCTGTAGGCCAAGCCAGGTAAACAGAAGGAAGGGCAGCCCACACAGTGCCTaGACAGCAGTGGCCAGCAGT +
Preference number: 2 (lower is better)
Translates to: IKTRGAPCRPSQVNRRKGSPHSA*TAVASS
Trigger: ACTGCTGGCCACTGCTGTCCAGGCACTGTGTGGGCT...GCCCTTCCTTCTGTTTACCTGGCTTGGCCTACAGGGGGCACCCCTGGTCTTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310611.8
ENST00000430195.2
3UTR-3UTR CCA 90 bp TCCCCCAGGAGGGGCATAATGAGTTACGTGGAGAGGACACTTCTGCCCTTGCTGCCACCCTTGAGACCCTaGCTGCCCGGGGACAAAGGA +
Preference number: 2 (lower is better)
Translates to: SPRRGIMSYVERTLLPLLPPLRP*LPGDKG
Trigger: TCCTTTGTCCCCGGGCAGCCAGGGTCTCAAGGGTGG...CAGCAAGGGCAGAAGTGTCCTCTCCACGTAACTCATTATGCCCCTCCTGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR CCA 90 bp ATCAAGACCAGGGGTGCCCCCTGTAGGCCAAGCCAGGTAAACAGAAGGAAGGGCGCGGGGAACAGAGGATaGCGGAGGAGGGAACACACA +
Preference number: 2 (lower is better)
Translates to: IKTRGAPCRPSQVNRRKGAGNRG*RRREHT
Trigger: TGTGTGTTCCCTCCTCCGCCATCCTCTGTTCCCCGC...GCCCTTCCTTCTGTTTACCTGGCTTGGCCTACAGGGGGCACCCCTGGTCTTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR-3UTR CCA 90 bp GCCGCACCTTTGATCTGGGCCTGGAACCATACTGAGTACATGCCCAGAAGCACCGAGCTGCACAGAGGATaGCTAGGGTCTGCCCTGCCC +
Preference number: 2 (lower is better)
Translates to: AAPLIWAWNHTEYMPRSTELHRG*LGSALP
Trigger: GGGCAGGGCAGACCCTAGCCATCCTCTGTGCAGCTC...GGTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGGTGCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
3UTR-3UTR TCA 90 bp GCCCAGAAGCACCGTTACTGTAGCCATCAGGTAGACCACCAGTCCACATGTCAGTGCCAGGACACCAGATaGGGCAGCTCACTGCGGGTC +
Preference number: 2 (lower is better)
Translates to: AQKHRYCSHQVDHQSTCQCQDTR*GSSLRV
Trigger: GACCCGCAGTGAGCTGCCTCATCTGGTGTCCTGGCA...CTGACATGTGGACTGGTGGTCTACCTGATGGCTACAGTAACGGTGCTTCTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
3UTR-3UTR TCA 90 bp ATCACCAAAGGAACCATGATGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTGAGGCGAGCCACCCTTaGGACCCTGGCTGCCCGGGG +
Preference number: 2 (lower is better)
Translates to: ITKGTMMFKASVPPRFSVEASHP*DPGCPG
Trigger: CCCCGGGCAGCCAGGGTCTCAAGGGTGGCTCGCCTC...AACGCTGAATCTAGGTGGGACGCTTGCCTTGAACATCATGGTTCCTTTGGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
3UTR-3UTR TCA 90 bp GCATCCAGTCCTCACCACCGAGGGCAGCCTGGGGAACTACTTTCAGCTGCAGCAGGCCTGGAACCATACTaGGTACATGCCCAGAAGCAC +
Preference number: 2 (lower is better)
Translates to: ASSPHHRGQPGELLSAAAGLEPY*VHAQKH
Trigger: GTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGCC...TGCTGCAGCTGAAAGTAGTTCCCCAGGCTGCCCTCGGTGGTGAGGACTGGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR TCA 90 bp CAGCACCTCAGGCAGGCTCAGGCTTTACGGCATTGCCTGCTTGCTCTTAGAGCAGGGGCTCCTTTGCCCTaGGAAGTGATTTCGGGGGAG +
Preference number: 2 (lower is better)
Translates to: QHLRQAQALRHCLLALRAGAPLP*EVISGE
Trigger: CTCCCCCGAAATCACTTCTCAGGGCAAAGGAGCCCC...TGCTCTAAGAGCAAGCAGGCAATGCCGTAAAGCCTGAGCCTGCCTGAGGTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR TCA 90 bp CTTAAGAGCCAAGAAGGTGAGGCTGGAGGACTTCCCCAGATACAGAGCTGCTCCTGCTGCCCCAGGATGTaGGGGCAGGTGGTGATGGAG +
Preference number: 2 (lower is better)
Translates to: LKSQEGEAGGLPQIQSCSCCPRM*GQVVME
Trigger: CTCCATCACCACCTGCCCTCACATCCTGGGGCAGCA...GGAGCAGCTCTGTATCTGGGGAAGTCCTCCAGCCTCACCTTCTTGGCTCTTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR-3UTR GCA 90 bp CACTCCCAGACGAGAAGTCACTGCAAGGCGTGGCTAGCAGCAAGATTCCTGACTGTGCCTGACCCCCTGTaGCCTGGCACAGGGACCAAA +
Preference number: 2 (lower is better)
Translates to: HSQTRSHCKAWLAARFLTVPDPL*PGTGTK
Trigger: TTTGGTCCCTGTGCCAGGGCACAGGGGGTCAGGCAC...AGTCAGGAATCTTGCTGCTAGCCACGCCTTGCAGTGACTTCTCGTCTGGGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR-3UTR CCA 90 bp CACTCCCAGACGAGAAGTCACTGCAAGGCGTGGCTAGCAGCAAGATTCCTGACTGTGCCTGGACAGCAGTaGCCAGCAGTGTCAGGGCTC +
Preference number: 2 (lower is better)
Translates to: HSQTRSHCKAWLAARFLTVPGQQ*PAVSGL
Trigger: GAGCCCTGACACTGCTGGCCACTGCTGTCCAGGCAC...AGTCAGGAATCTTGCTGCTAGCCACGCCTTGCAGTGACTTCTCGTCTGGGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310611.8
ENST00000430195.2
3UTR-3UTR CCA 90 bp TACCAGGCCGCACCTTTGATCTGGGCCTGGAACCATACTGAGTACATGCCCAGACCACCCTTGAGACCCTaGCTGCCCGGGGACAAAGGA +
Preference number: 2 (lower is better)
Translates to: YQAAPLIWAWNHTEYMPRPPLRP*LPGDKG
Trigger: TCCTTTGTCCCCGGGCAGCCAGGGTCTCAAGGGTGG...TCTGGGCATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGGTGCGGCCTGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
3UTR-3UTR CCA 90 bp TTCAGCTGCAGCAAGGAGCGGGGTGGTCTCTGGAGGGAAGAGAGTCCAGCCCTCCACGTGGTCCACAGCTaGGAGAGTGTTCTGAGACAT +
Preference number: 2 (lower is better)
Translates to: FSCSKERGGLWREESPALHVVHS*ESVLRH
Trigger: ATGTCTCAGAACACTCTCCCAGCTGTGGACCACGTG...GAGGGCTGGACTCTCTTCCCTCCAGAGACCACCCCGCTCCTTGCTGCAGCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR CCA 90 bp GAGCCAAGTGAATACCCCAGACATGAGCAGAATAAGGGAGGTGCGGGGAACAGAACCTGCCCCTGCTCCTaGGAACTGGAGCTCCAGCGC +
Preference number: 2 (lower is better)
Translates to: EPSEYPRHEQNKGGAGNRTCPCS*ELELQR
Trigger: GCGCTGGAGCTCCAGTTCCCAGGAGCAGGGGCAGGT...TCTGTTCCCCGCACCTCCCTTATTCTGCTCATGTCTGGGGTATTCACTTGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR TCA 90 bp ACCAAATCAGCACAAATTTCTGAAGGGCCTCAAGGGCAGAGCTGTCCCTCCAGGTGCCAGGACACCAGATaGGGCAGCTCACTGCGGGTC +
Preference number: 2 (lower is better)
Translates to: TKSAQISEGPQGQSCPSRCQDTR*GSSLRV
Trigger: GACCCGCAGTGAGCTGCCTCATCTGGTGTCCTGGCA...CCTGGAGGGACAGCTCTGCCCTTGAGGCCCTTCAGAAATTTGTGCTGATTTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR TCA 90 bp TCCCCCAGGAGGGGCATAATGAGTTACGTGGAGAGGACACTTCTGCCCTTGCTGACCAGGCCGCACCTTTaGTCTGGGCCTGGAACCATA +
Preference number: 2 (lower is better)
Translates to: SPRRGIMSYVERTLLPLLTRPHL*SGPGTI
Trigger: TATGGTTCCAGGCCCAGATCAAAGGTGCGGCCTGGT...CAGCAAGGGCAGAAGTGTCCTCTCCACGTAACTCATTATGCCCCTCCTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR TCA 90 bp GGGGGAGGGAAGTCCCTCCACAATCCGGCCTGCCAGGATGAAGGGCTCCTCCTGCACACAAGCAAGAAATaGCCACCAGCACATCACTAT +
Preference number: 2 (lower is better)
Translates to: GGGKSLHNPACQDEGLLLHTSKK*PPAHHY
Trigger: ATAGTGATGTGCTGGTGGTCATTTCTTGCTTGTGTG...CAGGAGGAGCCCTTCATCCTGGCAGGCCGGATTGTGGAGGGACTTCCCTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR GCA 90 bp TACCAGGCCGCACCTTTGATCTGGGCCTGGAACCATACTGAGTACATGCCCAGATGGATAGACGGGCAGTaGCAGGCACAGGTACCAGGC +
Preference number: 2 (lower is better)
Translates to: YQAAPLIWAWNHTEYMPRWIDGQ*QAQVPG
Trigger: GCCTGGTACCTGTGCCTGGCACTGCCCGTCTATCCA...TCTGGGCATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGGTGCGGCCTGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
3UTR-3UTR GCA 90 bp TCCCCCAGGAGGGGCATAATGAGTTACGTGGAGAGGACACTTCTGCCCTTGCTGGGGCAAAGCATGAGATaGCTGGGGCTCCTTTGCCCT +
Preference number: 2 (lower is better)
Translates to: SPRRGIMSYVERTLLPLLGQSMR*LGLLCP
Trigger: AGGGCAAAGGAGCCCCAGGCATCTCATGCTTTGCCC...CAGCAAGGGCAGAAGTGTCCTCTCCACGTAACTCATTATGCCCCTCCTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR GCA 90 bp CAGCACCTCAGGCAGGCTCAGGCTTTACGGCATTGCCTGCTTGCTCTTAGAGCATGCTTGTCCTGGAGATaGAATCTCCCCCAGGAGGGG +
Preference number: 2 (lower is better)
Translates to: QHLRQAQALRHCLLALRACLSWR*NLPQEG
Trigger: CCCCTCCTGGGGGAGATTGCATCTCCAGGACAAGCA...TGCTCTAAGAGCAAGCAGGCAATGCCGTAAAGCCTGAGCCTGCCTGAGGTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR GCA 90 bp GCCAACCAGACACAGGAGCATCAAGAGCACTACCAGAAGCCTCCCTGCTCTCTGCAAGCTGGTGAACTTTaGCTGGCCCTCCTACCCTGC +
Preference number: 2 (lower is better)
Translates to: ANQTQEHQEHYQKPPCSLQAGEL*LALLPC
Trigger: GCAGGGTAGGAGGGCCAGGCAAAGTTCACCAGCTTG...CAGAGAGCAGGGAGGCTTCTGGTAGTGCTCTTGATGCTCCTGTGTCTGGTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR-3UTR GCA 90 bp TTTGGTTTCTGCAGTCCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCAGGATGGCTAGGGTCTaGCCTGCCCAGTGGAGCCGG +
Preference number: 2 (lower is better)
Translates to: FGFCSPWTSQEVRKPDHFRMARV*PAQWSR
Trigger: CCGGCTCCACTGGGCAGGGCAGACCCTAGCCATCCT...GAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGGACTGCAGAAACCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
3UTR-3UTR GCA 90 bp TGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCGCAGGAACTCACATTTCCAGGATGGCTAGGGTCTaGCCTGCCCAGTGGAGCCGG +
Preference number: 2 (lower is better)
Translates to: CSRQASHLDSAFAGTHISRMARV*PAQWSR
Trigger: CCGGCTCCACTGGGCAGGGCAGACCCTAGCCATCCT...GGAAATGTGAGTTCCTGCGAACGCTGAATCTAGGTGGGACGCTTGCCTTGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
3UTR-3UTR GCA 90 bp GCATCCAGTCCTCACCACCGAGGGCAGCCTGGGGAACTACTTTCAGCTGCAGCAGGATGGCTTCAGCCATaGAGAGGCAGAACTGTGAAC +
Preference number: 2 (lower is better)
Translates to: ASSPHHRGQPGELLSAAAGWLQP*RGRTVN
Trigger: GTTCACAGTTCTGCCTCTGCATGGCTGAAGCCATCC...TGCTGCAGCTGAAAGTAGTTCCCCAGGCTGCCCTCGGTGGTGAGGACTGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496961.5
3UTR-3UTR CCA 90 bp TCCAGAAGACCCTCACCTGAGTCCCTTCTTTCCACAGTGCCTGACCCCCTGTGCAAGGAAGATCTTAGCTaGGCTAGGCAGCCCAGCCAG +
Preference number: 2 (lower is better)
Translates to: SRRPSPESLLSTVPDPLCKEDLS*ARQPSQ
Trigger: CTGGCTGGGCTGCCTAGCCCAGCTAAGATCTTCCTT...GCACAGGGGGTCAGGCACTGTGGAAAGAAGGGACTCAGGTGAGGGTCTTCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR CCA 90 bp CAGCACCTCAGGCAGGCTCAGGCTTTACGGCATTGCCTGCTTGCTCTTAGAGCACCCTCATTTGCCAGCTaGCACCAAACTCAGCCCCCT +
Preference number: 2 (lower is better)
Translates to: QHLRQAQALRHCLLALRAPSFAS*HQTQPP
Trigger: AGGGGGCTGAGTTTGGTGCCAGCTGGCAAATGAGGG...TGCTCTAAGAGCAAGCAGGCAATGCCGTAAAGCCTGAGCCTGCCTGAGGTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR CCA 90 bp CTTAAGAGCCAAGAAGGTGAGGCTGGAGGACTTCCCCAGATACAGAGCTGCTCCAGGAGCCCATGCAGCTaGGAGCCACTGAGATCCCAG +
Preference number: 2 (lower is better)
Translates to: LKSQEGEAGGLPQIQSCSRSPCS*EPLRSQ
Trigger: CTGGGATCTCAGTGGCTCCCAGCTGCATGGGCTCCT...GGAGCAGCTCTGTATCTGGGGAAGTCCTCCAGCCTCACCTTCTTGGCTCTTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR-3UTR CCA 90 bp TACCAGGCCGCACCTTTGATCTGGGCCTGGAACCATACTGAGTACATGCCCAGAGTCTGCCCTGCCCAGTaGAGCCGGATCCGTGCTTTT +
Preference number: 2 (lower is better)
Translates to: YQAAPLIWAWNHTEYMPRVCPAQ*SRIRAF
Trigger: AAAAGCACGGATCCGGCTCCACTGGGCAGGGCAGAC...TCTGGGCATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGGTGCGGCCTGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
3UTR-3UTR CCA 90 bp CATGCCCAGAAGCACCGTTACTGTAGCCATCAGGTAGACCACCAGTCCACATGTGAGCTGCACAGAGGATaGCTAGGGTCTGCCCTGCCC +
Preference number: 2 (lower is better)
Translates to: HAQKHRYCSHQVDHQSTCELHRG*LGSALP
Trigger: GGGCAGGGCAGACCCTAGCCATCCTCTGTGCAGCTC...ACATGTGGACTGGTGGTCTACCTGATGGCTACAGTAACGGTGCTTCTGGGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
3UTR CAA 90 bp CAGGAGCATCAAGAGCACTACCAGAAGCCTCCCTGCTCTCTGAGCTaGCAGAGGGGACCCAGAAATGCTGGGCTTGAGGCATCAAGACCA +
Preference number: 2 (lower is better)
Translates to: QEHQEHYQKPPCSLS*QRGPRNAGLEASRP
Trigger: TGGTCTTGATGCCTCAAGCCCAGCATTTCTGGGTCCCCTCTGCAAGCTCAGAGAGCAGGGAGGCTTCTGGTAGTGCTCTTGATGCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR-3UTR TCA 90 bp GCCGCACCTTTGATCTGGGCCTGGAACCATACTGAGTACATGCCCAGAAGCACCTCAGATGGTAGAGCTTaGGGCGAGCCACCCTTGAGA +
Preference number: 2 (lower is better)
Translates to: AAPLIWAWNHTEYMPRSTSDGRA*GEPPLR
Trigger: TCTCAAGGGTGGCTCGCCTCAAGCTCTACCATCTGA...GGTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGGTGCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
3UTR-3UTR TCA 90 bp GCATCCAGTCCTCACCACCGAGGGCAGCCTGGGGAACTACTTTCAGCTGCAGCATGTCAGGCCTTGCCATaGTCTAGGGAGATCCTATCT +
Preference number: 2 (lower is better)
Translates to: ASSPHHRGQPGELLSAAACQALP*SREILS
Trigger: AGATAGGATCTCCCTAGATCATGGCAAGGCCTGACA...TGCTGCAGCTGAAAGTAGTTCCCCAGGCTGCCCTCGGTGGTGAGGACTGGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR GCA 90 bp CTCCACAATCCGGCCTGCCAGGATGAAGGGCTCCTCCTGGTGACCTATTCCCTAAGTCCAGCCCTCATTTaGCAGCTGGCACCAAACTCA +
Preference number: 2 (lower is better)
Translates to: LHNPACQDEGLLLVTYSLSPALI*QLAPNS
Trigger: TGAGTTTGGTGCCAGCTGGCAAATGAGGGCTGGACT...TAGGGAATAGGTCACCAGGAGGAGCCCTTCATCCTGGCAGGCCGGATTGTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR GCA 90 bp CCACTTAAGAGCCAAGAAGGTGAGGCTGGAGGACTTCCCCAGATACAGAGCTGCGGACACTTCTGCCCTTaGTGTCCCCATTCTGTCCCC +
Preference number: 2 (lower is better)
Translates to: PLKSQEGEAGGLPQIQSCGHFCP*CPHSVP
Trigger: GGGGACAGAATGGGGACAGCAAGGGCAGAAGTGTCC...GCAGCTCTGTATCTGGGGAAGTCCTCCAGCCTCACCTTCTTGGCTCTTAAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR-3UTR GCA 90 bp AGTGATAGGGACGGAGTAAACCCATACTGCAGGTTTCCCAGCCCCCAAGCTGATGCAGGAGACCACCAGTaGCCTCCTCTCTGCTCTGTG +
Preference number: 2 (lower is better)
Translates to: SDRDGVNPYCRFPSPQADAGDHQ*PPLCSV
Trigger: CACAGAGCAGAGAGGAGGGCACTGGTGGTCTCCTGC...ATCAGCTTGGGGGCTGGGAAACCTGCAGTATGGGTTTACTCCGTCCCTATCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR-3UTR CCA 90 bp CACAGGTACCAGGCCGCACCTTTGATCTGGGCCTGGAACCATACTGAGTACATGCATGATCACCAGGGCTaGATAGACGGGCAGTGCCAG +
Preference number: 2 (lower is better)
Translates to: HRYQAAPLIWAWNHTEYMHDHQG*IDGQCQ
Trigger: CTGGCACTGCCCGTCTATCCAGCCCTGGTGATCATG...CATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGGTGCGGCCTGGTACCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
3UTR-3UTR CCA 90 bp CTCCACAATCCGGCCTGCCAGGATGAAGGGCTCCTCCTGGTGACCTATTCCCTACACGTGGTCCACAGCTaGGAGAGTGTTCTGAGACAT +
Preference number: 2 (lower is better)
Translates to: LHNPACQDEGLLLVTYSLHVVHS*ESVLRH
Trigger: ATGTCTCAGAACACTCTCCCAGCTGTGGACCACGTG...TAGGGAATAGGTCACCAGGAGGAGCCCTTCATCCTGGCAGGCCGGATTGTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR CCA 90 bp TCCCCCAGGAGGGGCATAATGAGTTACGTGGAGAGGACACTTCTGCCCTTGCTGCCTGAGTCTGCTAAGTaGTCCACGTGGTCCACAGCT +
Preference number: 2 (lower is better)
Translates to: SPRRGIMSYVERTLLPLLPESAK*STWSTA
Trigger: AGCTGTGGACCACGTGGACCACTTAGCAGACTCAGG...CAGCAAGGGCAGAAGTGTCCTCTCCACGTAACTCATTATGCCCCTCCTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR CCA 90 bp CAAGTGAATACCCCAGACATGAGCAGAATAAGGGAGGTGCGGGGAACAGAGGATGAGCGGGGTGGTCTCTaGAGGGAAGAGAGTCCAGCC +
Preference number: 2 (lower is better)
Translates to: QVNTPDMSRIREVRGTEDERGGL*REESPA
Trigger: GGCTGGACTCTCTTCCCTCCAGAGACCACCCCGCTC...ATCCTCTGTTCCCCGCACCTCCCTTATTCTGCTCATGTCTGGGGTATTCACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR CCA 90 bp AGTGGTAACAGCCTACCACTTAAGAGCCAAGAAGGTGAGGCTGGAGGACTTCCCCAGCAAGGAGCGGGGTaGTCTCTGGAGGGAAGAGAG +
Preference number: 2 (lower is better)
Translates to: SGNSLPLKSQEGEAGGLPQQGAG*SLEGRE
Trigger: CTCTCTTCCCTCCAGAGACCACCCCGCTCCTTGCTG...GGGAAGTCCTCCAGCCTCACCTTCTTGGCTCTTAAGTGGTAGGCTGTTACCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR-3UTR CCA 90 bp CCAAGTGAATACCCCAGACATGAGCAGAATAAGGGAGGTGCGGGGAACAGAGGACCACCGAGGGCAGCCTaGGGAACTACTTTCAGCTGC +
Preference number: 2 (lower is better)
Translates to: PSEYPRHEQNKGGAGNRGPPRAA*GTTFSC
Trigger: GCAGCTGAAAGTAGTTCCCCAGGCTGCCCTCGGTGG...TCCTCTGTTCCCCGCACCTCCCTTATTCTGCTCATGTCTGGGGTATTCACTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR CCA 90 bp CACTCCCAGACGAGAAGTCACTGCAAGGCGTGGCTAGCAGCAAGATTCCTGACTGGCTCAGAGGAGGGGTaGTTACAGAAAAGACGGGGG +
Preference number: 2 (lower is better)
Translates to: HSQTRSHCKAWLAARFLTGSEEG*LQKRRG
Trigger: CCCCCGTCTTTTCTGTAACCACCCCTCCTCTGAGCC...AGTCAGGAATCTTGCTGCTAGCCACGCCTTGCAGTGACTTCTCGTCTGGGAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR-3UTR CCA 90 bp AGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATTTTGACCCACGAGCTGCACAGAGGATaGCTAGGGTCTGCCCTGCCC +
Preference number: 2 (lower is better)
Translates to: RLSITFHSYPVHLPILTHELHRG*LGSALP
Trigger: GGGCAGGGCAGACCCTAGCCATCCTCTGTGCAGCTC...GTGGGTCAAAATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR TCA 90 bp ATGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCGCAGGAACTCACATTTCTGCCAGGACACCAGATaGGGCAGCTCACTGCGGGTC +
Preference number: 2 (lower is better)
Translates to: MFKASVPPRFSVRRNSHFCQDTR*GSSLRV
Trigger: GACCCGCAGTGAGCTGCCTCATCTGGTGTCCTGGCA...GAAATGTGAGTTCCTGCGAACGCTGAATCTAGGTGGGACGCTTGCCTTGAACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
3UTR-3UTR TCA 90 bp GAACTACTTTCAGCTGCAGCAAGGAGCGGGGTGGTCTCTGGAGGGAAGAGAGTCCAGAAGACCCTCACCTaGGTCCCTTCTTTCCACAGT +
Preference number: 2 (lower is better)
Translates to: ELLSAAARSGVVSGGKRVQKTLT*VPSFHS
Trigger: ACTGTGGAAAGAAGGGACTCAGGTGAGGGTCTTCTG...GACTCTCTTCCCTCCAGAGACCACCCCGCTCCTTGCTGCAGCTGAAAGTAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR TCA 90 bp CTTAAGAGCCAAGAAGGTGAGGCTGGAGGACTTCCCCAGATACAGAGCTGCTCCGATCCTGAGGTGGGCTaGAGGAAGATCTTAGCTGGG +
Preference number: 2 (lower is better)
Translates to: LKSQEGEAGGLPQIQSCSDPEVG*RKILAG
Trigger: CCCAGCTAAGATCTTCCTTCAGCCCACCTCAGGATC...GGAGCAGCTCTGTATCTGGGGAAGTCCTCCAGCCTCACCTTCTTGGCTCTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR-3UTR TCA 90 bp GCCAACCAGACACAGGAGCATCAAGAGCACTACCAGAAGCCTCCCTGCTCTCTGCAAAATCACCGCAGGTaGAATTCTCCATGCAGCCCC +
Preference number: 2 (lower is better)
Translates to: ANQTQEHQEHYQKPPCSLQNHRR*NSPCSP
Trigger: GGGGCTGCATGGAGAATTTCACCTGCGGTGATTTTG...CAGAGAGCAGGGAGGCTTCTGGTAGTGCTCTTGATGCTCCTGTGTCTGGTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR-3UTR GCA 90 bp CTGGCTGTGATGAGGAAAGAGGAGATGCAGTCCCTGGATCAAAATCACCGCAGGGGACACTTCTGCCCTTaGTGTCCCCATTCTGTCCCC +
Preference number: 2 (lower is better)
Translates to: LAVMRKEEMQSLDQNHRRGHFCP*CPHSVP
Trigger: GGGGACAGAATGGGGACAGCAAGGGCAGAAGTGTCC...CCTGCGGTGATTTTGATCCAGGGACTGCATCTCCTCTTTCCTCATCACAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR GCA 90 bp CCAAGTGAATACCCCAGACATGAGCAGAATAAGGGAGGTGCGGGGAACAGAGGATGCTTGTCCTGGAGATaGAATCTCCCCCAGGAGGGG +
Preference number: 2 (lower is better)
Translates to: PSEYPRHEQNKGGAGNRGCLSWR*NLPQEG
Trigger: CCCCTCCTGGGGGAGATTGCATCTCCAGGACAAGCA...TCCTCTGTTCCCCGCACCTCCCTTATTCTGCTCATGTCTGGGGTATTCACTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR GCA 90 bp AGTGATAGGGACGGAGTAAACCCATACTGCAGGTTTCCCAGCCCCCAAGCTGATCAAGCTGGTGAACTTTaGCTGGCCCTCCTACCCTGC +
Preference number: 2 (lower is better)
Translates to: SDRDGVNPYCRFPSPQADQAGEL*LALLPC
Trigger: GCAGGGTAGGAGGGCCAGGCAAAGTTCACCAGCTTG...ATCAGCTTGGGGGCTGGGAAACCTGCAGTATGGGTTTACTCCGTCCCTATCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR-3UTR GCA 90 bp GTGACGAGGGGTGGAGCTACTGCACAACCAGCCACATCAGACAAGTCAACCTTGTTGTCTGCCATGCCTTaGAGCACTTACCCTGGCTCC +
Preference number: 2 (lower is better)
Translates to: VTRGGATAQPATSDKSTLLSAMP*STYPGS
Trigger: GGAGCCAGGGTAAGTGCTGCAAGGCATGGCAGACAA...CAAGGTTGACTTGTCTGATGTGGCTGGTTGTGCAGTAGCTCCACCCCTCGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528785.1
3UTR-3UTR CCA 90 bp GAGGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCATGATCACCAGGGCTaGATAGACGGGCAGTGCCAG +
Preference number: 2 (lower is better)
Translates to: EASGSGSPSPSTHTQYISHDHQG*IDGQCQ
Trigger: CTGGCACTGCCCGTCTATCCAGCCCTGGTGATCATG...GGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000533024.5
3UTR-3UTR CCA 90 bp GATAGGGACGGAGTAAACCCATACTGCAGGTTTCCCAGCCCCCAAGCTGATGCACAGCAGCCTTCGGCTTaGTTAAGCCAATGCCCTCCT +
Preference number: 2 (lower is better)
Translates to: DRDGVNPYCRFPSPQADAQQPSA*LSQCPP
Trigger: AGGAGGGCATTGGCTTAACCAAGCCGAAGGCTGCTG...TGCATCAGCTTGGGGGCTGGGAAACCTGCAGTATGGGTTTACTCCGTCCCTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR-3UTR CCA 90 bp GGGCATAATGAGTTACGTGGAGAGGACACTTCTGCCCTTGCTGTCCCCATTCTGCCCTCATTTGCCAGCTaGCACCAAACTCAGCCCCCT +
Preference number: 2 (lower is better)
Translates to: GHNELRGEDTSALAVPILPSFAS*HQTQPP
Trigger: AGGGGGCTGAGTTTGGTGCCAGCTGGCAAATGAGGG...CAGAATGGGGACAGCAAGGGCAGAAGTGTCCTCTCCACGTAACTCATTATGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR TCA 90 bp GCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATCAGATGGTAGAGCTTaGGGCGAGCCACCCTTGAGA +
Preference number: 2 (lower is better)
Translates to: ASGSGSPSPSTHTQYISPSDGRA*GEPPLR
Trigger: TCTCAAGGGTGGCTCGCCTCAAGCTCTACCATCTGA...TGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000533024.5
3UTR-3UTR TCA 90 bp CATGCCCAGAAGCACCGTTACTGTAGCCATCAGGTAGACCACCAGTCCACATGTGGCCTGGAACCATACTaGGTACATGCCCAGAAGCAC +
Preference number: 2 (lower is better)
Translates to: HAQKHRYCSHQVDHQSTCGLEPY*VHAQKH
Trigger: GTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGCC...ACATGTGGACTGGTGGTCTACCTGATGGCTACAGTAACGGTGCTTCTGGGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
3UTR-3UTR TCA 90 bp AGGCAGCCCAGCCAGCAGCCTTCGGCTTGGTTAAGCCAATGCCCTCCTGCTTCTCACACAAGCAAGAAATaGCCACCAGCACATCACTAT +
Preference number: 2 (lower is better)
Translates to: RQPSQQPSAWLSQCPPASHTSKK*PPAHHY
Trigger: ATAGTGATGTGCTGGTGGTCATTTCTTGCTTGTGTG...AGAAGCAGGAGGGCATTGGCTTAACCAAGCCGAAGGCTGCTGGCTGGGCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR GCA 90 bp ATGCCTGAATCTCCCACAGTGAGGTTTTCAAAACAAGACCTGGCTAGGCACGGTAGGAACACCTGCCCCTaGTCCTGGGAACTGGAGCTC +
Preference number: 2 (lower is better)
Translates to: MPESPTVRFSKQDLARHGRNTCP*SWELEL
Trigger: GAGCTCCAGTTCCCAGGAGCAGGGGCAGGTGTTCCT...ACCGTGCCTAGCCAGGTCTTGTTTTGAAAACCTCACTGTGGGAGATTCAGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR-3UTR GCA 90 bp GAGCCAAGTGAATACCCCAGACATGAGCAGAATAAGGGAGGTGCGGGGAACAGAGTGGAGCCGGATCCGTaGTTTTCGGGAGCAGAAGAA +
Preference number: 2 (lower is better)
Translates to: EPSEYPRHEQNKGGAGNRVEPDP*FSGAEE
Trigger: TTCTTCTGCTCCCGAAAAGCACGGATCCGGCTCCAC...TCTGTTCCCCGCACCTCCCTTATTCTGCTCATGTCTGGGGTATTCACTTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR GCA 90 bp ACTTCAGGAGGAACAACCAAGGTGACGAGGGGTGGAGCTACTGCACAACCAGCCTTCTGTTTTGGCCTGTaGCAAGCCCAAGGAAGTCCA +
Preference number: 2 (lower is better)
Translates to: TSGGTTKVTRGGATAQPAFCFGL*QAQGSP
Trigger: TGGACTTCCTTGGGCTTGGCACAGGCCAAAACAGAA...GGCTGGTTGTGCAGTAGCTCCACCCCTCGTCACCTTGGTTGTTCCTCCTGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528785.1
3UTR-3UTR CCA 90 bp TTCTGCAGTCCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTAAATGTGCCTGGACAGCAGTaGCCAGCAGTGTCAGGGCTC +
Preference number: 2 (lower is better)
Translates to: FCSPWTSQEVRKPDHFLNVPGQQ*PAVSGL
Trigger: GAGCCCTGACACTGCTGGCCACTGCTGTCCAGGCAC...ATTTAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGGACTGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
3UTR-3UTR CCA 90 bp TCCAGAAGACCCTCACCTGAGTCCCTTCTTTCCACAGTGCCTGACCCCCTGTGCCCTTTGATCTGGGCCTaGAACCATACTGAGTACATG +
Preference number: 2 (lower is better)
Translates to: SRRPSPESLLSTVPDPLCPLIWA*NHTEYM
Trigger: CATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGG...GCACAGGGGGTCAGGCACTGTGGAAAGAAGGGACTCAGGTGAGGGTCTTCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR CCA 90 bp GGGCATAATGAGTTACGTGGAGAGGACACTTCTGCCCTTGCTGTCCCCATTCTGGCCGCACCTTTGATCTaGGCCTGGAACCATACTGAG +
Preference number: 2 (lower is better)
Translates to: GHNELRGEDTSALAVPILAAPLI*AWNHTE
Trigger: CTCAGTATGGTTCCAGGCCCAGATCAAAGGTGCGGC...CAGAATGGGGACAGCAAGGGCAGAAGTGTCCTCTCCACGTAACTCATTATGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR CCA 90 bp CATGCCCAGAAGCACCGTTACTGTAGCCATCAGGTAGACCACCAGTCCACATGTGCCGCACCTTTGATCTaGGCCTGGAACCATACTGAG +
Preference number: 2 (lower is better)
Translates to: HAQKHRYCSHQVDHQSTCAAPLI*AWNHTE
Trigger: CTCAGTATGGTTCCAGGCCCAGATCAAAGGTGCGGC...ACATGTGGACTGGTGGTCTACCTGATGGCTACAGTAACGGTGCTTCTGGGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
3UTR-3UTR CCA 90 bp TGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCGCAGGAACTCACATTTCCCATGATCACCAGGGCTaGATAGACGGGCAGTGCCAG +
Preference number: 2 (lower is better)
Translates to: CSRQASHLDSAFAGTHISHDHQG*IDGQCQ
Trigger: CTGGCACTGCCCGTCTATCCAGCCCTGGTGATCATG...GGAAATGTGAGTTCCTGCGAACGCTGAATCTAGGTGGGACGCTTGCCTTGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
3UTR-3UTR CCA 90 bp CCAAGTGAATACCCCAGACATGAGCAGAATAAGGGAGGTGCGGGGAACAGAGGATCAGCAGCACTTTCCTaGCTCAGCTGTTGTCAGGCC +
Preference number: 2 (lower is better)
Translates to: PSEYPRHEQNKGGAGNRGSAALS*LSCCQA
Trigger: GGCCTGACAACAGCTGAGCCAGGAAAGTGCTGCTGA...TCCTCTGTTCCCCGCACCTCCCTTATTCTGCTCATGTCTGGGGTATTCACTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR CCA 90 bp ATGCCTGAATCTCCCACAGTGAGGTTTTCAAAACAAGACCTGGCTAGGCACGGTCCTGCTCCTGGGAACTaGAGCTCCAGCGCCTACATC +
Preference number: 2 (lower is better)
Translates to: MPESPTVRFSKQDLARHGPAPGN*SSSAYI
Trigger: GATGTAGGCGCTGGAGCTCCAGTTCCCAGGAGCAGG...ACCGTGCCTAGCCAGGTCTTGTTTTGAAAACCTCACTGTGGGAGATTCAGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR-3UTR TCA 90 bp TGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCGCAGGAACTCACATTTCCTCAGATGGTAGAGCTTaGGGCGAGCCACCCTTGAGA +
Preference number: 2 (lower is better)
Translates to: CSRQASHLDSAFAGTHISSDGRA*GEPPLR
Trigger: TCTCAAGGGTGGCTCGCCTCAAGCTCTACCATCTGA...GGAAATGTGAGTTCCTGCGAACGCTGAATCTAGGTGGGACGCTTGCCTTGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
3UTR-3UTR TCA 90 bp TCCAGAAGACCCTCACCTGAGTCCCTTCTTTCCACAGTGCCTGACCCCCTGTGCTCTGAGACATCGACCTaGCAGACGCTGTATATTAGA +
Preference number: 2 (lower is better)
Translates to: SRRPSPESLLSTVPDPLCSETST*QTLYIR
Trigger: TCTAATATACAGCGTCTGTCAGGTCGATGTCTCAGA...GCACAGGGGGTCAGGCACTGTGGAAAGAAGGGACTCAGGTGAGGGTCTTCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR TCA 90 bp AGTGGTAACAGCCTACCACTTAAGAGCCAAGAAGGTGAGGCTGGAGGACTTCCCCAGAAGACCCTCACCTaGGTCCCTTCTTTCCACAGT +
Preference number: 2 (lower is better)
Translates to: SGNSLPLKSQEGEAGGLPQKTLT*VPSFHS
Trigger: ACTGTGGAAAGAAGGGACTCAGGTGAGGGTCTTCTG...GGGAAGTCCTCCAGCCTCACCTTCTTGGCTCTTAAGTGGTAGGCTGTTACCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR-3UTR TCA 90 bp CAAACCAACCTCCTTACTTCTAAGCTACCCGGAGAGGAGGACCTGAATCTTCAGCTCAAGCCCGGATCCTaGGGTGGGCTGAAGGAAGAT +
Preference number: 2 (lower is better)
Translates to: QTNLLTSKLPGEEDLNLQLKPGS*GGLKED
Trigger: ATCTTCCTTCAGCCCACCTCAGGATCCGGGCTTGAG...CTGAAGATTCAGGTCCTCCTCTCCGGGTAGCTTAGAAGTAAGGAGGTTGGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR TCA 90 bp GCTACCCGGAGAGGAGGACCTGAATCTTCAGAAGACCAAGGACATCCACAACACAAGAAGGGCAAAGCATaGGATGCCTGGGGCTCCTTT +
Preference number: 2 (lower is better)
Translates to: ATRRGGPESSEDQGHPQHKKGKA*DAWGSF
Trigger: AAAGGAGCCCCAGGCATCTCATGCTTTGCCCTTCTT...GTGTTGTGGATGTCCTTGGTCTTCTGAAGATTCAGGTCCTCCTCTCCGGGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR TCA 90 bp CCAAGTGAATACCCCAGACATGAGCAGAATAAGGGAGGTGCGGGGAACAGAGGATCCTATCTTCTCAACTaGGCCCAGACCACAGCTCAG +
Preference number: 2 (lower is better)
Translates to: PSEYPRHEQNKGGAGNRGSYLLN*AQTTAQ
Trigger: CTGAGCTGTGGTCTGGGCTCAGTTGAGAAGATAGGA...TCCTCTGTTCCCCGCACCTCCCTTATTCTGCTCATGTCTGGGGTATTCACTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR TCA 90 bp GAACAATACCCCTCTGCACAGCAGGGGCCTCCTTTAGATGCTTGTCCTGGAGATTCCTATCTTCTCAACTaGGCCCAGACCACAGCTCAG +
Preference number: 2 (lower is better)
Translates to: EQYPSAQQGPPLDACPGDSYLLN*AQTTAQ
Trigger: CTGAGCTGTGGTCTGGGCTCAGTTGAGAAGATAGGA...ATCTCCAGGACAAGCATCTAAAGGAGGCCCCTGCTGTGCAGAGGGGTATTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR TCA 90 bp AAGGTGAGGCTGGAGGACTTCCCCAGATACAGAGCTGCTCCCATTCCATACCAACAAAATCACCGCAGGTaGAATTCTCCATGCAGCCCC +
Preference number: 2 (lower is better)
Translates to: KVRLEDFPRYRAAPIPYQQNHRR*NSPCSP
Trigger: GGGGCTGCATGGAGAATTTCACCTGCGGTGATTTTG...TTGGTATGGAATGGGAGCAGCTCTGTATCTGGGGAAGTCCTCCAGCCTCACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR-3UTR GCA 90 bp GGATCTGGAAATCTGGTGCATGATCACCAGGGCTGGATAGACGGGCAGTGCCAGACCATACTGAGTACATaGCCAGAAGCACCGTTACTG +
Preference number: 2 (lower is better)
Translates to: GSGNLVHDHQGWIDGQCQTILST*PEAPLL
Trigger: CAGTAACGGTGCTTCTGGGCATGTACTCAGTATGGT...CTGGCACTGCCCGTCTATCCAGCCCTGGTGATCATGCACCAGATTTCCAGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
3UTR-3UTR GCA 90 bp GATAGGGACGGAGTAAACCCATACTGCAGGTTTCCCAGCCCCCAAGCTGATGCAGGACCAGCCAAGAAGTaGGAAAACCTGACCACTTCT +
Preference number: 2 (lower is better)
Translates to: DRDGVNPYCRFPSPQADAGPAKK*ENLTTS
Trigger: AGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCC...TGCATCAGCTTGGGGGCTGGGAAACCTGCAGTATGGGTTTACTCCGTCCCTATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR-3UTR GCA 90 bp GGCATAATGAGTTACGTGGAGAGGACACTTCTGCCCTTGCTGTCCCCATTCTGTGGATCAGAAAAGCCCTaGCCCACTTCCTTGGCCCTT +
Preference number: 2 (lower is better)
Translates to: GIMSYVERTLLPLLSPFCGSEKP*PTSLAL
Trigger: AAGGGCCAAGGAAGTGGGGCAGGGCTTTTCTGATCC...ACAGAATGGGGACAGCAAGGGCAGAAGTGTCCTCTCCACGTAACTCATTATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR GCA 90 bp CTGGCTGTGATGAGGAAAGAGGAGATGCAGTCCCTGGATCAAAATCACCGCAGGAGTCCAGCCCTCATTTaGCAGCTGGCACCAAACTCA +
Preference number: 2 (lower is better)
Translates to: LAVMRKEEMQSLDQNHRRSPALI*QLAPNS
Trigger: TGAGTTTGGTGCCAGCTGGCAAATGAGGGCTGGACT...CCTGCGGTGATTTTGATCCAGGGACTGCATCTCCTCTTTCCTCATCACAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR GCA 90 bp CAAGTGAATACCCCAGACATGAGCAGAATAAGGGAGGTGCGGGGAACAGAGGATGGAACAATACCCCTCTaGACAGCAGGGGCCTCCTTT +
Preference number: 2 (lower is better)
Translates to: QVNTPDMSRIREVRGTEDGTIPL*TAGASF
Trigger: AAAGGAGGCCCCTGCTGTGCAGAGGGGTATTGTTCC...ATCCTCTGTTCCCCGCACCTCCCTTATTCTGCTCATGTCTGGGGTATTCACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR GCA 90 bp CCACTTAAGAGCCAAGAAGGTGAGGCTGGAGGACTTCCCCAGATACAGAGCTGCACCTATTCCCTACACTaGAGTCAGACCAGGCTAAGC +
Preference number: 2 (lower is better)
Translates to: PLKSQEGEAGGLPQIQSCTYSLH*SQTRLS
Trigger: GCTTAGCCTGGTCTGACTGCAGTGTAGGGAATAGGT...GCAGCTCTGTATCTGGGGAAGTCCTCCAGCCTCACCTTCTTGGCTCTTAAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR-3UTR CCA 90 bp GGCATAATGAGTTACGTGGAGAGGACACTTCTGCCCTTGCTGTCCCCATTCTGTCAGCAGCCTTCGGCTTaGTTAAGCCAATGCCCTCCT +
Preference number: 2 (lower is better)
Translates to: GIMSYVERTLLPLLSPFCQQPSA*LSQCPP
Trigger: AGGAGGGCATTGGCTTAACCAAGCCGAAGGCTGCTG...ACAGAATGGGGACAGCAAGGGCAGAAGTGTCCTCTCCACGTAACTCATTATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR CAA 90 bp AGGGGTGGAGCTACTGCACAACCAGCCACATCAGACAAGTCAACCTaGGCAGTCAGTGAAATGACAGCTGTTGATGTCAGAGCACTCCCA +
Preference number: 2 (lower is better)
Translates to: RGGATAQPATSDKST*AVSEMTAVDVRALP
Trigger: TGGGAGTGCTCTGACATCAACAGCTGTCATTTCACTGACTGCCAAGGTTGACTTGTCTGATGTGGCTGGTTGTGCAGTAGCTCCACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528785.1
3UTR-3UTR TCA 90 bp CAAACCAACCTCCTTACTTCTAAGCTACCCGGAGAGGAGGACCTGAATCTTCAGGCTGGGAGAGTGTTCTaGGACATCGACCTGACAGAC +
Preference number: 2 (lower is better)
Translates to: QTNLLTSKLPGEEDLNLQAGRVF*DIDLTD
Trigger: GTCTGTCAGGTCGATGTCTCAGAACACTCTCCCAGC...CTGAAGATTCAGGTCCTCCTCTCCGGGTAGCTTAGAAGTAAGGAGGTTGGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR TCA 90 bp CAAACCAACCTCCTTACTTCTAAGCTACCCGGAGAGGAGGACCTGAATCTTCAGTCCCAGAGTTCCCTGTaGGCTATGTCGACTTGCCTC +
Preference number: 2 (lower is better)
Translates to: QTNLLTSKLPGEEDLNLQSQSSL*AMSTCL
Trigger: GAGGCAAGTCGACATAGCTCACAGGGAACTCTGGGA...CTGAAGATTCAGGTCCTCCTCTCCGGGTAGCTTAGAAGTAAGGAGGTTGGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR GCA 90 bp GCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCAGATCTGGAAATCTGGTaGATGATCACCAGGGCTGGA +
Preference number: 2 (lower is better)
Translates to: ASGSGSPSPSTHTQYISPDLEIW*MITRAG
Trigger: TCCAGCCCTGGTGATCATGCACCAGATTTCCAGATC...TGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000533024.5
3UTR-3UTR GCA 90 bp CCTGCTCCTGGGAACTGGAGCTCCAGCGCCTACATCCCAGGCTTCCCAGAGTTCTCCACTACATCACACTaGTTTCTTAAAAGTAACCCA +
Preference number: 2 (lower is better)
Translates to: PAPGNWSSSAYIPGFPEFSTTSH*FLKSNP
Trigger: TGGGTTACTTTTAAGAAAGCAGTGTGATGTAGTGGA...GAACTCTGGGAAGCCTGGGATGTAGGCGCTGGAGCTCCAGTTCCCAGGAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR CCA 90 bp TCTGTCCCCATACTATTGAATCAAACCAACCTCCTTACTTCTAAGCTACCCGGAGTGCCTGGACAGCAGTaGCCAGCAGTGTCAGGGCTC +
Preference number: 2 (lower is better)
Translates to: SVPILLNQTNLLTSKLPGVPGQQ*PAVSGL
Trigger: GAGCCCTGACACTGCTGGCCACTGCTGTCCAGGCAC...TCCGGGTAGCTTAGAAGTAAGGAGGTTGGTTTGATTCAATAGTATGGGGACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR CCA 90 bp CCCAGTACATCTCCCCATTTTGACCCACTGAATTATTCCTCAACAATAGCAGCTGTGCCTGGACAGCAGTaGCCAGCAGTGTCAGGGCTC +
Preference number: 2 (lower is better)
Translates to: PSTSPHFDPLNYSSTIAAVPGQQ*PAVSGL
Trigger: GAGCCCTGACACTGCTGGCCACTGCTGTCCAGGCAC...AGCTGCTATTGTTGAGGAATAATTCAGTGGGTCAAAATGGGGAGATGTACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
3UTR-3UTR CCA 90 bp ATCACCAAAGGAACCATGATGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCATGATCACCAGGGCTaGATAGACGGGCAGTGCCAG +
Preference number: 2 (lower is better)
Translates to: ITKGTMMFKASVPPRFSVHDHQG*IDGQCQ
Trigger: CTGGCACTGCCCGTCTATCCAGCCCTGGTGATCATG...AACGCTGAATCTAGGTGGGACGCTTGCCTTGAACATCATGGTTCCTTTGGTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
3UTR-3UTR CCA 90 bp TTGGTTTCTGCAGTCCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTGCCTCATGTCTGGCTTaGAGGCCTGAGAAAAAGGAG +
Preference number: 2 (lower is better)
Translates to: LVSAVPGPAKKCENLTTSASCLA*RPEKKE
Trigger: CTCCTTTTTCTCAGGCCTCCAAGCCAGACATGAGGC...AGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGGACTGCAGAAACCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496961.5
3UTR CAA 90 bp GACAAAAGGGCAACCATGTGCTTCTCCTCCAAGGCGTTTGCTTCCTaGCTGAGGAGCCAAGTGAATACCCCAGACATGAGCAGAATAAGG +
Preference number: 2 (lower is better)
Translates to: DKRATMCFSSKAFAS*LRSQVNTPDMSRIR
Trigger: CCTTATTCTGCTCATGTCTGGGGTATTCACTTGGCTCCTCAGCAAGGAAGCAAACGCCTTGGAGGAGAAGCACATGGTTGCCCTTTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR GCA 90 bp GCCTGGAACCATACTGAGTACATGCCCAGAAGCACCGTTACTGTAGCCATCAGGACCATACTGAGTACATaGCCAGAAGCACCGTTACTG +
Preference number: 2 (lower is better)
Translates to: AWNHTEYMPRSTVTVAIRTILST*PEAPLL
Trigger: CAGTAACGGTGCTTCTGGGCATGTACTCAGTATGGT...CCTGATGGCTACAGTAACGGTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
3UTR-3UTR GCA 90 bp ACCATGATGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCGCAGGAACTCAGATCTGGAAATCTGGTaGATGATCACCAGGGCTGGA +
Preference number: 2 (lower is better)
Translates to: TMMFKASVPPRFSVRRNSDLEIW*MITRAG
Trigger: TCCAGCCCTGGTGATCATGCACCAGATTTCCAGATC...TGAGTTCCTGCGAACGCTGAATCTAGGTGGGACGCTTGCCTTGAACATCATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
3UTR-3UTR GCA 90 bp GGCATAATGAGTTACGTGGAGAGGACACTTCTGCCCTTGCTGTCCCCATTCTGTGGACCAGCCAAGAAGTaGGAAAACCTGACCACTTCT +
Preference number: 2 (lower is better)
Translates to: GIMSYVERTLLPLLSPFCGPAKK*ENLTTS
Trigger: AGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCC...ACAGAATGGGGACAGCAAGGGCAGAAGTGTCCTCTCCACGTAACTCATTATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR CCA 90 bp GATGCACCTTTCATTTCATGTTACACAGGATCTTTGTGCCAACCAGACACAGGAAGCCATGCACGGGGGTaGAAGGGTGGGACGATGAGA +
Preference number: 2 (lower is better)
Translates to: DAPFISCYTGSLCQPDTGSHARG*KGGTMR
Trigger: TCTCATCGTCCCACCCTTCCACCCCCGTGCATGGCT...TCCTGTGTCTGGTTGGCACAAAGATCCTGTGTAACATGAAATGAAAGGTGCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR CAA 90 bp AGCCCCCAAGCTGATGCACCTTTCATTTCATGTTACACAGGATCTTaGTGCCAACCAGACACAGGAGCATCAAGAGCACTACCAGAAGCC +
Preference number: 2 (lower is better)
Translates to: SPQADAPFISCYTGS*CQPDTGASRALPEA
Trigger: GGCTTCTGGTAGTGCTCTTGATGCTCCTGTGTCTGGTTGGCACAAAGATCCTGTGTAACATGAAATGAAAGGTGCATCAGCTTGGGGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR-3UTR TCA 90 bp CTTGGACCAAAGAGCTGGGAAGAGATGACAACTGAGGAAAGCTTAGATAACAAGACCAGGCCGCACCTTTaGTCTGGGCCTGGAACCATA +
Preference number: 2 (lower is better)
Translates to: LGPKSWEEMTTEESLDNKTRPHL*SGPGTI
Trigger: TATGGTTCCAGGCCCAGATCAAAGGTGCGGCCTGGT...CTTGTTATCTAAGCTTTCCTCAGTTGTCATCTCTTCCCAGCTCTTTGGTCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR TCA 90 bp CAAACCAACCTCCTTACTTCTAAGCTACCCGGAGAGGAGGACCTGAATCTTCAGTGGAAATCTGGTGCATaGTCACCAGGGCTGGATAGA +
Preference number: 2 (lower is better)
Translates to: QTNLLTSKLPGEEDLNLQWKSGA*SPGLDR
Trigger: TCTATCCAGCCCTGGTGATCATGCACCAGATTTCCA...CTGAAGATTCAGGTCCTCCTCTCCGGGTAGCTTAGAAGTAAGGAGGTTGGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR GCA 90 bp TTGGTTTCTGCAGTCCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTACCATACTGAGTACATaGCCAGAAGCACCGTTACTG +
Preference number: 2 (lower is better)
Translates to: LVSAVPGPAKKCENLTTSTILST*PEAPLL
Trigger: CAGTAACGGTGCTTCTGGGCATGTACTCAGTATGGT...AGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGGACTGCAGAAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
3UTR-3UTR GCA 90 bp CTTACTTCTAAGCTACCCGGAGAGGAGGACCTGAATCTTCAGAAGACCAAGGACGGACCAGCCAAGAAGTaGGAAAACCTGACCACTTCT +
Preference number: 2 (lower is better)
Translates to: LTSKLPGEEDLNLQKTKDGPAKK*ENLTTS
Trigger: AGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCC...GTCCTTGGTCTTCTGAAGATTCAGGTCCTCCTCTCCGGGTAGCTTAGAAGTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR CCA 90 bp AGGCAGCCCAGCCAGCAGCCTTCGGCTTGGTTAAGCCAATGCCCTCCTGCTTCTAGTGGTCTTAAGATATaGAATGTACCTAAGGTTGTA +
Preference number: 2 (lower is better)
Translates to: RQPSQQPSAWLSQCPPASSGLKI*NVPKVV
Trigger: TACAACCTTAGGTACATTCCATATCTTAAGACCACT...AGAAGCAGGAGGGCATTGGCTTAACCAAGCCGAAGGCTGCTGGCTGGGCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR CCA 90 bp GATGCACCTTTCATTTCATGTTACACAGGATCTTTGTGCCAACCAGACACAGGAGGCTCAGAGGAGGGGTaGTTACAGAAAAGACGGGGG +
Preference number: 2 (lower is better)
Translates to: DAPFISCYTGSLCQPDTGGSEEG*LQKRRG
Trigger: CCCCCGTCTTTTCTGTAACCACCCCTCCTCTGAGCC...TCCTGTGTCTGGTTGGCACAAAGATCCTGTGTAACATGAAATGAAAGGTGCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR-3UTR CCA 90 bp GGGTGGAGCTACTGCACAACCAGCCACATCAGACAAGTCAACCTTGGCAGTCAGCTGATGAGGACTACTTaGAGTTTGGAGTTCTCTCTT +
Preference number: 2 (lower is better)
Translates to: GWSYCTTSHIRQVNLGSQLMRTT*SLEFSL
Trigger: AAGAGAGAACTCCAAACTCCAAGTAGTCCTCATCAG...CTGACTGCCAAGGTTGACTTGTCTGATGTGGCTGGTTGTGCAGTAGCTCCACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528785.1
3UTR CAA 90 bp AAGTCTGATGAGGACTACTTGGAGTTTGGAGTTCTCTCTTCTGTTTaGGCCTGTGCCAAGCCCAAGGAAGTCCATGGCTGCATCTCTTCA +
Preference number: 2 (lower is better)
Translates to: KSDEDYLEFGVLSSV*ACAKPKEVHGCISS
Trigger: TGAAGAGATGCAGCCATGGACTTCCTTGGGCTTGGCACAGGCCAAAACAGAAGAGAGAACTCCAAACTCCAAGTAGTCCTCATCAGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528785.1
3UTR-3UTR TCA 90 bp CATTTCCATTTTCTTCCTCGGCAAGTAGGATCTGGAAATCTGGTGCATGATCACGGCCTGGAACCATACTaGGTACATGCCCAGAAGCAC +
Preference number: 2 (lower is better)
Translates to: HFHFLPRQVGSGNLVHDHGLEPY*VHAQKH
Trigger: GTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGCC...GTGATCATGCACCAGATTTCCAGATCCTACTTGCCGAGGAAGAAAATGGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
3UTR-3UTR TCA 90 bp TCTAAGCTACCCGGAGAGGAGGACCTGAATCTTCAGAAGACCAAGGACATCCACCACACAAGCAAGAAATaGCCACCAGCACATCACTAT +
Preference number: 2 (lower is better)
Translates to: SKLPGEEDLNLQKTKDIHHTSKK*PPAHHY
Trigger: ATAGTGATGTGCTGGTGGTCATTTCTTGCTTGTGTG...GTGGATGTCCTTGGTCTTCTGAAGATTCAGGTCCTCCTCTCCGGGTAGCTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR TCA 90 bp AGTGATAGGGACGGAGTAAACCCATACTGCAGGTTTCCCAGCCCCCAAGCTGATCTGTCCCCATACTATTaGATCAAACCAACCTCCTTA +
Preference number: 2 (lower is better)
Translates to: SDRDGVNPYCRFPSPQADLSPYY*IKPTSL
Trigger: TAAGGAGGTTGGTTTGATTCAATAGTATGGGGACAG...ATCAGCTTGGGGGCTGGGAAACCTGCAGTATGGGTTTACTCCGTCCCTATCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR-3UTR GCA 90 bp CAGAGCCTAAGAGGACCATATCCCATAAATAAGACCCATGGGCTCTCTCCACTAGATCTGGAAATCTGGTaGATGATCACCAGGGCTGGA +
Preference number: 2 (lower is better)
Translates to: QSLRGPYPINKTHGLSPLDLEIW*MITRAG
Trigger: TCCAGCCCTGGTGATCATGCACCAGATTTCCAGATC...TAGTGGAGAGAGCCCATGGGTCTTATTTATGGGATATGGTCCTCTTAGGCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR GCA 90 bp AAAGGCCCCAGCACCATTCAGCTAATGATTATTATTAACTCTGAACAGGCTTTAACAGCCCACGCAAACTaGCGGCTGTCAGCACGCCTG +
Preference number: 2 (lower is better)
Translates to: KGPSTIQLMIIINSEQALTAHAN*RLSARL
Trigger: CAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTGT...TAAAGCCTGTTCAGAGTTAATAATAATCATTAGCTGAATGGTGCTGGGGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR-3UTR GCA 90 bp GATGCACCTTTCATTTCATGTTACACAGGATCTTTGTGCCAACCAGACACAGGATACCAGAAGCCTCCCTaGTCTCTGAGCTTGCAGAGG +
Preference number: 2 (lower is better)
Translates to: DAPFISCYTGSLCQPDTGYQKPP*SLSLQR
Trigger: CCTCTGCAAGCTCAGAGAGCAGGGAGGCTTCTGGTA...TCCTGTGTCTGGTTGGCACAAAGATCCTGTGTAACATGAAATGAAAGGTGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR-3UTR CCA 90 bp CAAACCAACCTCCTTACTTCTAAGCTACCCGGAGAGGAGGACCTGAATCTTCAGCTTGGACCAAAGAGCTaGGAAGAGATGACAACTGAG +
Preference number: 2 (lower is better)
Translates to: QTNLLTSKLPGEEDLNLQLGPKS*EEMTTE
Trigger: CTCAGTTGTCATCTCTTCCCAGCTCTTTGGTCCAAG...CTGAAGATTCAGGTCCTCCTCTCCGGGTAGCTTAGAAGTAAGGAGGTTGGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR CAA 90 bp ATGAAGCTGATAAGGAGAGCAAGTCTGATGAGGACTACTTGGAGTTaGGAGTTCTCTCTTCTGTTTTGGCCTGTGCCAAGCCCAAGGAAG +
Preference number: 2 (lower is better)
Translates to: MKLIRRASLMRTTWS*EFSLLFWPVPSPRK
Trigger: CTTCCTTGGGCTTGGCACAGGCCAAAACAGAAGAGAGAACTCCAAACTCCAAGTAGTCCTCATCAGACTTGCTCTCCTTATCAGCTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528785.1
3UTR-3UTR GCA 90 bp CTTAAGAGCCAAGAAGGTGAGGCTGGAGGACTTCCCCAGATACAGAGCTGCTCCTCCACTACATCACACTaGTTTCTTAAAAGTAACCCA +
Preference number: 2 (lower is better)
Translates to: LKSQEGEAGGLPQIQSCSSTTSH*FLKSNP
Trigger: TGGGTTACTTTTAAGAAAGCAGTGTGATGTAGTGGA...GGAGCAGCTCTGTATCTGGGGAAGTCCTCCAGCCTCACCTTCTTGGCTCTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR-3UTR CCA 90 bp GATGCACCTTTCATTTCATGTTACACAGGATCTTTGTGCCAACCAGACACAGGAATGAGAAAGAAGGGATaGGCCAGTGAGTGCGGAAGG +
Preference number: 2 (lower is better)
Translates to: DAPFISCYTGSLCQPDTGMRKKG*ASECGR
Trigger: CCTTCCGCACTCACTGGCCCATCCCTTCTTTCTCAT...TCCTGTGTCTGGTTGGCACAAAGATCCTGTGTAACATGAAATGAAAGGTGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR-3UTR CCA 90 bp GATGCACCTTTCATTTCATGTTACACAGGATCTTTGTGCCAACCAGACACAGGAAGTCACTGCAAGGCGTaGCTAGCAGCAAGATTCCTG +
Preference number: 2 (lower is better)
Translates to: DAPFISCYTGSLCQPDTGSHCKA*LAARFL
Trigger: CAGGAATCTTGCTGCTAGCCACGCCTTGCAGTGACT...TCCTGTGTCTGGTTGGCACAAAGATCCTGTGTAACATGAAATGAAAGGTGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR-3UTR GCA 90 bp GCTACCCGGAGAGGAGGACCTGAATCTTCAGAAGACCAAGGACATCCACAACACTCCACTACATCACACTaGTTTCTTAAAAGTAACCCA +
Preference number: 2 (lower is better)
Translates to: ATRRGGPESSEDQGHPQHSTTSH*FLKSNP
Trigger: TGGGTTACTTTTAAGAAAGCAGTGTGATGTAGTGGA...GTGTTGTGGATGTCCTTGGTCTTCTGAAGATTCAGGTCCTCCTCTCCGGGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR GCA 90 bp GCTACTGCACAACCAGCCACATCAGACAAGTCAACCTTGGCAGTCAGTGAAATGATGTGCAATTTTGTCTaGCATGCCTTGCAGCACTTA +
Preference number: 2 (lower is better)
Translates to: ATAQPATSDKSTLAVSEMMCNFV*HALQHL
Trigger: TAAGTGCTGCAAGGCATGGCAGACAAAATTGCACAT...CATTTCACTGACTGCCAAGGTTGACTTGTCTGATGTGGCTGGTTGTGCAGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528785.1
3UTR-3UTR CCA 90 bp CTCTCTTCTGTTTTGGCCTGTGCCAAGCCCAAGGAAGTCCATGGCTGCATCTCTAAGTTCCTTAGATTCTaGCCAAGATGTGCAATTTTG +
Preference number: 2 (lower is better)
Translates to: LSSVLACAKPKEVHGCISKFLRF*PRCAIL
Trigger: CAAAATTGCACATCTTGGCCAGAATCTAAGGAACTT...AGAGATGCAGCCATGGACTTCCTTGGGCTTGGCACAGGCCAAAACAGAAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528785.1
3UTR-3UTR GCA 90 bp GAATACTTACCTAAAGTCTTGACCGAAGGGCAGCCCTCCTCTATTTGGAAAGTTCAATTTTGTCTGCCATaGCTTGCAGCACTTACCCTG +
Preference number: 2 (lower is better)
Translates to: EYLPKVLTEGQPSSIWKVQFCLP*LAALTL
Trigger: CAGGGTAAGTGCTGCAAGGCATGGCAGACAAAATTG...AACTTTCCAAATAGAGGAGGGCTGCCCTTCGGTCAAGACTTTAGGTAAGTATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528785.1
3UTR-3UTR CCA 90 bp TTAAATAGATCCCTTATAGATCACCAAAGGAACCATGATGTTCAAGGCAAGCGTGCCGCACCTTTGATCTaGGCCTGGAACCATACTGAG +
Preference number: 2 (lower is better)
Translates to: LNRSLIDHQRNHDVQGKRAAPLI*AWNHTE
Trigger: CTCAGTATGGTTCCAGGCCCAGATCAAAGGTGCGGC...ACGCTTGCCTTGAACATCATGGTTCCTTTGGTGATCTATAAGGGATCTATTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
3UTR-3UTR CCA 90 bp AGACAGGAACAATACCCCTCTGCACAGCAGGGGCCTCCTTTAGATGCTTGTCCTAGTGGTCTTAAGATATaGAATGTACCTAAGGTTGTA +
Preference number: 2 (lower is better)
Translates to: RQEQYPSAQQGPPLDACPSGLKI*NVPKVV
Trigger: TACAACCTTAGGTACATTCCATATCTTAAGACCACT...AGGACAAGCATCTAAAGGAGGCCCCTGCTGTGCAGAGGGGTATTGTTCCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR TCA 90 bp AAAGGCCCCAGCACCATTCAGCTAATGATTATTATTAACTCTGAACAGGCTTTATGTCAGGCCTTGCCATaGTCTAGGGAGATCCTATCT +
Preference number: 2 (lower is better)
Translates to: KGPSTIQLMIIINSEQALCQALP*SREILS
Trigger: AGATAGGATCTCCCTAGATCATGGCAAGGCCTGACA...TAAAGCCTGTTCAGAGTTAATAATAATCATTAGCTGAATGGTGCTGGGGCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR-3UTR GCA 90 bp AAAGGCCCCAGCACCATTCAGCTAATGATTATTATTAACTCTGAACAGGCTTTACAGGCTTTACGGCATTaGCTGCTTGCTCTTAGAGCA +
Preference number: 2 (lower is better)
Translates to: KGPSTIQLMIIINSEQALQALRH*LLALRA
Trigger: TGCTCTAAGAGCAAGCAGGCAATGCCGTAAAGCCTG...TAAAGCCTGTTCAGAGTTAATAATAATCATTAGCTGAATGGTGCTGGGGCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR-3UTR GCA 90 bp CTTGGACCAAAGAGCTGGGAAGAGATGACAACTGAGGAAAGCTTAGATAACAAGTCCACTACATCACACTaGTTTCTTAAAAGTAACCCA +
Preference number: 2 (lower is better)
Translates to: LGPKSWEEMTTEESLDNKSTTSH*FLKSNP
Trigger: TGGGTTACTTTTAAGAAAGCAGTGTGATGTAGTGGA...CTTGTTATCTAAGCTTTCCTCAGTTGTCATCTCTTCCCAGCTCTTTGGTCCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR CAA 90 bp TATATAGTTTTTCATCTGCAAAGCAGTTTTTCTATGGCTGACAATTaGGCTGACAGGATGAAGCTGATAAGGAGAGCAAGTCTGATGAGG +
Preference number: 2 (lower is better)
Translates to: YIVFHLQSSFSMADN*ADRMKLIRRASLMR
Trigger: CCTCATCAGACTTGCTCTCCTTATCAGCTTCATCCTGTCAGCCAAATTGTCAGCCATAGAAAAACTGCTTTGCAGATGAAAAACTATATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000528785.1
3UTR-3UTR CCA 90 bp GTACCTAAGGTTGTACAACAGAGCCTAAGAGGACCATATCCCATAAATAAGACCAGTGGTCTTAAGATATaGAATGTACCTAAGGTTGTA +
Preference number: 2 (lower is better)
Translates to: VPKVVQQSLRGPYPINKTSGLKI*NVPKVV
Trigger: TACAACCTTAGGTACATTCCATATCTTAAGACCACT...GGTCTTATTTATGGGATATGGTCCTCTTAGGCTCTGTTGTACAACCTTAGGTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR CAA 90 bp AACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCAGCCCCCGCACCACCTCCAGCAGCCTTCGGCTaGGTTAAGCCAATGCCCTCC +
Preference number: 3 (lower is better)
Translates to: NCRLSARLPARPPAPAPPPAAFG*VKPMPS
Trigger: GGAGGGCATTGGCTTAACCAAGCCGAAGGCTGCTGG...AGGTGGTGCGGGGGCTGGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR CAA 90 bp CAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCAGCCCTACCAGGCCGCACCTTaGATCTGGGCCTGGAACCAT +
Preference number: 3 (lower is better)
Translates to: QPTQTAGCQHACPPAHQPYQAAP*IWAWNH
Trigger: ATGGTTCCAGGCCCAGATCAAAGGTGCGGCCTGGTA...GGGCTGGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
3UTR TCA 72 bp GCCCTGCAGCCCTCAAGCCCGGATCCTGAGGTGGGCTaGAGGAAGATCTTAGCTGGGCTAGGCAGCCCAGCC +
Preference number: 3 (lower is better)
Translates to: ALQPSSPDPEVG*RKILAGLGSPA
Trigger: GGCTGGGCTGCCTAGCCCAGCTAAGATCTTCCTTCAGCCCACCTCAGGATCCGGGCTTGAGGGCTGCAGGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR TCA 72 bp GGTAGACCACCAGTCCACATGTCAGATGGTAGAGCTTaGGGCGAGCCACCCTTGAGACCCTGGCTGCCCGGG +
Preference number: 3 (lower is better)
Translates to: GRPPVHMSDGRA*GEPPLRPWLPG
Trigger: CCCGGGCAGCCAGGGTCTCAAGGGTGGCTCGCCTCAAGCTCTACCATCTGACATGTGGACTGGTGGTCTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
3UTR TCA 72 bp AGGGCAAAGCATGAGATGCCTGGGGCTCCTTTGCCCTaGGAAGTGATTTCGGGGGAGGGAGCGCACGCAGGC +
Preference number: 3 (lower is better)
Translates to: RAKHEMPGAPLP*EVISGEGAHAG
Trigger: GCCTGCGTGCGCTCCCTCCCCCGAAATCACTTCTCAGGGCAAAGGAGCCCCAGGCATCTCATGCTTTGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR GCA 72 bp TCACCACCGAGGGCAGCCTGGGGAACTACTTTCAGCTaGAGCAAGGAGCGGGGTGGTCTCTGGAGGGAAGAG +
Preference number: 3 (lower is better)
Translates to: SPPRAAWGTTFS*SKERGGLWREE
Trigger: CTCTTCCCTCCAGAGACCACCCCGCTCCTTGCTGCAGCTGAAAGTAGTTCCCCAGGCTGCCCTCGGTGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR CCA 72 bp GCTGCACAGAGGATGGCTAGGGTCTGCCCTGCCCAGTaGAGCCGGATCCGTGCTTTTCGGGAGCAGAAGAAG +
Preference number: 3 (lower is better)
Translates to: AAQRMARVCPAQ*SRIRAFREQKK
Trigger: CTTCTTCTGCTCCCGAAAAGCACGGATCCGGCTCCACTGGGCAGGGCAGACCCTAGCCATCCTCTGTGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
3UTR TCA 72 bp ACATGTCAGATGGTAGAGCTTGAGGCGAGCCACCCTTaGGACCCTGGCTGCCCGGGGACAAAGGAGGCAGAG +
Preference number: 3 (lower is better)
Translates to: TCQMVELEASHP*DPGCPGTKEAE
Trigger: CTCTGCCTCCTTTGTCCCCGGGCAGCCAGGGTCTCAAGGGTGGCTCGCCTCAAGCTCTACCATCTGACATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
3UTR TCA 72 bp GGGAGGGAAGTCCCTCCACAATCCGGCCTGCCAGGATaGAGGGCTCCTCCTGGTGACCTATTCCCTACACTG +
Preference number: 3 (lower is better)
Translates to: GREVPPQSGLPG*RAPPGDLFPTL
Trigger: CAGTGTAGGGAATAGGTCACCAGGAGGAGCCCTTCATCCTGGCAGGCCGGATTGTGGAGGGACTTCCCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR CCA 72 bp CAGTCTAGCATCCAGTCCTCACCACCGAGGGCAGCCTaGGGAACTACTTTCAGCTGCAGCAAGGAGCGGGGT +
Preference number: 3 (lower is better)
Translates to: QSSIQSSPPRAA*GTTFSCSKERG
Trigger: ACCCCGCTCCTTGCTGCAGCTGAAAGTAGTTCCCCAGGCTGCCCTCGGTGGTGAGGACTGGATGCTAGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR GCA 72 bp AAAAGAGGGGGAGGGAAGTCCCTCCACAATCCGGCCTaGCAGGATGAAGGGCTCCTCCTGGTGACCTATTCC +
Preference number: 3 (lower is better)
Translates to: KRGGGKSLHNPA*QDEGLLLVTYS
Trigger: GGAATAGGTCACCAGGAGGAGCCCTTCATCCTGGCAGGCCGGATTGTGGAGGGACTTCCCTCCCCCTCTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR CCA 72 bp CTGCCCTCCAGGCCTGCTGGTCAGAAAGGCGACAGCTaGGGCCCCTTCCTCCTGCAGAATATAAATGACTCC +
Preference number: 3 (lower is better)
Translates to: LPSRPAGQKGDS*GPFLLQNINDS
Trigger: GGAGTCATTTATATTCTGCAGGAGGAAGGGGCCCCAGCTGTCGCCTTTCTGACCAGCAGGCCTGGAGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR TCA 72 bp GTGCCCTGGCACAGGGACCAAATCAGCACAAATTTCTaGAGGGCCTCAAGGGCAGAGCTGTCCCTCCAGGGT +
Preference number: 3 (lower is better)
Translates to: VPWHRDQISTNF*RASRAELSLQG
Trigger: ACCCTGGAGGGACAGCTCTGCCCTTGAGGCCCTTCAGAAATTTGTGCTGATTTGGTCCCTGTGCCAGGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR TCA 72 bp CCAGCGCCTACATCCCAGGCTTCCCAGAGTTCCCTGTaGGCTATGTCGACTTGCCTCAGCAGCACTTTCCTG +
Preference number: 3 (lower is better)
Translates to: PAPTSQASQSSL*AMSTCLSSTFL
Trigger: CAGGAAAGTGCTGCTGAGGCAAGTCGACATAGCTCACAGGGAACTCTGGGAAGCCTGGGATGTAGGCGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR GCA 72 bp GAAGGTGAGGCTGGAGGACTTCCCCAGATACAGAGCTaGTCCCATTCCATACCAACCCCAGCCATGATGGGG +
Preference number: 3 (lower is better)
Translates to: EGEAGGLPQIQS*SHSIPTPAMMG
Trigger: CCCCATCATGGCTGGGGTTGGTATGGAATGGGAGCAGCTCTGTATCTGGGGAAGTCCTCCAGCCTCACCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR CCA 72 bp GTAGGATCTGGAAATCTGGTGCATGATCACCAGGGCTaGATAGACGGGCAGTGCCAGGCACAGGTACCAGGC +
Preference number: 3 (lower is better)
Translates to: VGSGNLVHDHQG*IDGQCQAQVPG
Trigger: GCCTGGTACCTGTGCCTGGCACTGCCCGTCTATCCAGCCCTGGTGATCATGCACCAGATTTCCAGATCCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
3UTR CCA 72 bp ACTACTTTCAGCTGCAGCAAGGAGCGGGGTGGTCTCTaGAGGGAAGAGAGTCCAGCCCTCATTTGCCAGCTG +
Preference number: 3 (lower is better)
Translates to: TTFSCSKERGGL*REESPALICQL
Trigger: CAGCTGGCAAATGAGGGCTGGACTCTCTTCCCTCCAGAGACCACCCCGCTCCTTGCTGCAGCTGAAAGTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR CCA 72 bp GCCAAGCCAGGTAAACAGAAGGAAGGGCAGGAGTACTaGAAGTTCAGGCTCAACAGCCACCCCTGCCACCAC +
Preference number: 3 (lower is better)
Translates to: AKPGKQKEGQEY*KFRLNSHPCHH
Trigger: GTGGTGGCAGGGGTGGCTGTTGAGCCTGAACTTCCAGTACTCCTGCCCTTCCTTCTGTTTACCTGGCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR GCA 72 bp ACATCCACAACACTAACATCTAGGAACACCTGCCCCTaGTCCTGGGAACTGGAGCTCCAGCGCCTACATCCC +
Preference number: 3 (lower is better)
Translates to: TSTTLTSRNTCP*SWELELQRLHP
Trigger: GGGATGTAGGCGCTGGAGCTCCAGTTCCCAGGAGCAGGGGCAGGTGTTCCTAGATGTTAGTGTTGTGGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR GCA 72 bp CCAAGGACATCCACAACACTAACATCTAGGAACACCTaGCCCTGCTCCTGGGAACTGGAGCTCCAGCGCCTA +
Preference number: 3 (lower is better)
Translates to: PRTSTTLTSRNT*PCSWELELQRL
Trigger: TAGGCGCTGGAGCTCCAGTTCCCAGGAGCAGGGGCAGGTGTTCCTAGATGTTAGTGTTGTGGATGTCCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR GCA 72 bp AGAGGACTCAGTGCCCACTCCCAGACGAGAAGTCACTaGAAGGCGTGGCTAGCAGCAAGATTCCTGACTTCC +
Preference number: 3 (lower is better)
Translates to: RGLSAHSQTRSH*KAWLAARFLTS
Trigger: GGAAGTCAGGAATCTTGCTGCTAGCCACGCCTTGCAGTGACTTCTCGTCTGGGAGTGGGCACTGAGTCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR CCA 72 bp ACAACACTAACATCTAGGAACACCTGCCCCTGCTCCTaGGAACTGGAGCTCCAGCGCCTACATCCCAGGCTT +
Preference number: 3 (lower is better)
Translates to: TTLTSRNTCPCS*ELELQRLHPRL
Trigger: AAGCCTGGGATGTAGGCGCTGGAGCTCCAGTTCCCAGGAGCAGGGGCAGGTGTTCCTAGATGTTAGTGTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR CCA 72 bp AGTGCCCACTCCCAGACGAGAAGTCACTGCAAGGCGTaGCTAGCAGCAAGATTCCTGACTTCCTTCCCACAG +
Preference number: 3 (lower is better)
Translates to: SAHSQTRSHCKA*LAARFLTSFPQ
Trigger: CTGTGGGAAGGAAGTCAGGAATCTTGCTGCTAGCCACGCCTTGCAGTGACTTCTCGTCTGGGAGTGGGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR-3UTR CAA 90 bp CTTAAGAGCCAAGAAGGTGAGGCTGGAGGACTTCCCCAGATACAGAGCTGCTCCCCCTGCCCCACTTCCTaGGCCCTTATGAAATGCTTC +
Preference number: 3 (lower is better)
Translates to: LKSQEGEAGGLPQIQSCSPCPTS*ALMKCF
Trigger: GAAGCATTTCATAAGGGCCAAGGAAGTGGGGCAGGG...GGAGCAGCTCTGTATCTGGGGAAGTCCTCCAGCCTCACCTTCTTGGCTCTTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR-3UTR CAA 90 bp GCCAACCAGACACAGGAGCATCAAGAGCACTACCAGAAGCCTCCCTGCTCTCTGGTGAGCTATGTCGACTaGCCTCAGCAGCACTTTCCT +
Preference number: 3 (lower is better)
Translates to: ANQTQEHQEHYQKPPCSLVSYVD*PQQHFP
Trigger: AGGAAAGTGCTGCTGAGGCAAGTCGACATAGCTCAC...CAGAGAGCAGGGAGGCTTCTGGTAGTGCTCTTGATGCTCCTGTGTCTGGTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR TCA 72 bp CCAGGCCGCACCTTTGATCTGGGCCTGGAACCATACTaGGTACATGCCCAGAAGCACCGTTACTGTAGCCAT +
Preference number: 3 (lower is better)
Translates to: PGRTFDLGLEPY*VHAQKHRYCSH
Trigger: ATGGCTACAGTAACGGTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGGTGCGGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
3UTR GCA 72 bp CCTGAGTCCCTTCTTTCCACAGTGCCTGACCCCCTGTaGCCTGGCACAGGGACCAAATCAGCACAAATTTCT +
Preference number: 3 (lower is better)
Translates to: PESLLSTVPDPL*PGTGTKSAQIS
Trigger: AGAAATTTGTGCTGATTTGGTCCCTGTGCCAGGGCACAGGGGGTCAGGCACTGTGGAAAGAAGGGACTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR GCA 72 bp AGCACCTCAGGCAGGCTCAGGCTTTACGGCATTGCCTaGTTGCTCTTAGAGCAAGCTGGTGAACTTTGCCTG +
Preference number: 3 (lower is better)
Translates to: STSGRLRLYGIA*LLLEQAGELCL
Trigger: CAGGCAAAGTTCACCAGCTTGCTCTAAGAGCAAGCAGGCAATGCCGTAAAGCCTGAGCCTGCCTGAGGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR GCA 72 bp AGCCACACCAGTGATAGGGACGGAGTAAACCCATACTaGAGGTTTCCCAGCCCCCAAGCTGATGCACCTTTC +
Preference number: 3 (lower is better)
Translates to: SHTSDRDGVNPY*RFPSPQADAPF
Trigger: GAAAGGTGCATCAGCTTGGGGGCTGGGAAACCTGCAGTATGGGTTTACTCCGTCCCTATCACTGGTGTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR GCA 72 bp AGGAGGAACAACCAAGGTGACGAGGGGTGGAGCTACTaGACAACCAGCCACATCAGACAAGTCAACCTTGGC +
Preference number: 3 (lower is better)
Translates to: RRNNQGDEGWSY*TTSHIRQVNLG
Trigger: GCCAAGGTTGACTTGTCTGATGTGGCTGGTTGTGCAGTAGCTCCACCCCTCGTCACCTTGGTTGTTCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528785.1
3UTR-3UTR CAA 90 bp ACCATGATGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCGCAGGAACTCATACCAGGCCGCACCTTaGATCTGGGCCTGGAACCAT +
Preference number: 3 (lower is better)
Translates to: TMMFKASVPPRFSVRRNSYQAAP*IWAWNH
Trigger: ATGGTTCCAGGCCCAGATCAAAGGTGCGGCCTGGTA...TGAGTTCCTGCGAACGCTGAATCTAGGTGGGACGCTTGCCTTGAACATCATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
3UTR-3UTR CAA 90 bp AAGGTGAGGCTGGAGGACTTCCCCAGATACAGAGCTGCTCCCATTCCATACCAACCCTGCCCCACTTCCTaGGCCCTTATGAAATGCTTC +
Preference number: 3 (lower is better)
Translates to: KVRLEDFPRYRAAPIPYQPCPTS*ALMKCF
Trigger: GAAGCATTTCATAAGGGCCAAGGAAGTGGGGCAGGG...TTGGTATGGAATGGGAGCAGCTCTGTATCTGGGGAAGTCCTCCAGCCTCACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR GCA 72 bp GGGAGGACAATGAAAGAGACAGGAACAATACCCCTCTaGACAGCAGGGGCCTCCTTTAGATGCTTGTCCTGG +
Preference number: 3 (lower is better)
Translates to: GRTMKETGTIPL*TAGASFRCLSW
Trigger: CCAGGACAAGCATCTAAAGGAGGCCCCTGCTGTGCAGAGGGGTATTGTTCCTGTCTCTTTCATTGTCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR CAA 90 bp GCCAACCAGACACAGGAGCATCAAGAGCACTACCAGAAGCCTCCCTGCTCTCTGTCAACAATAGCAGCTTaGGTTTCTGCAGTCCCTGGA +
Preference number: 3 (lower is better)
Translates to: ANQTQEHQEHYQKPPCSLSTIAA*VSAVPG
Trigger: TCCAGGGACTGCAGAAACCAAAGCTGCTATTGTTGA...CAGAGAGCAGGGAGGCTTCTGGTAGTGCTCTTGATGCTCCTGTGTCTGGTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR-3UTR CAA 90 bp CCCAGACATGAGCAGAATAAGGGAGGTGCGGGGAACAGAGGATGGCGGAGGAGGGAAACTTTGTTTTCTTaGGATCAGAAAAGCCCTGCC +
Preference number: 3 (lower is better)
Translates to: PRHEQNKGGAGNRGWRRRETLFS*DQKSPA
Trigger: GGCAGGGCTTTTCTGATCCAAAGAAAACAAAGTTTC...CCTCCTCCGCCATCCTCTGTTCCCCGCACCTCCCTTATTCTGCTCATGTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR TCA 72 bp GCACTTTCCTGGCTCAGCTGTTGTCAGGCCTTGCCATaGTCTAGGGAGATCCTATCTTCTCAACTGAGCCCA +
Preference number: 3 (lower is better)
Translates to: ALSWLSCCQALP*SREILSSQLSP
Trigger: TGGGCTCAGTTGAGAAGATAGGATCTCCCTAGATCATGGCAAGGCCTGACAACAGCTGAGCCAGGAAAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR CCA 72 bp TTTCACTTCAGGAGGAACAACCAAGGTGACGAGGGGTaGAGCTACTGCACAACCAGCCACATCAGACAAGTC +
Preference number: 3 (lower is better)
Translates to: FHFRRNNQGDEG*SYCTTSHIRQV
Trigger: GACTTGTCTGATGTGGCTGGTTGTGCAGTAGCTCCACCCCTCGTCACCTTGGTTGTTCCTCCTGAAGTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528785.1
3UTR-3UTR CAA 90 bp ATCAAGACCAGGGGTGCCCCCTGTAGGCCAAGCCAGGTAAACAGAAGGAAGGGCTCTGTCCCCATACTATaGAATCAAACCAACCTCCTT +
Preference number: 3 (lower is better)
Translates to: IKTRGAPCRPSQVNRRKGSVPIL*NQTNLL
Trigger: AAGGAGGTTGGTTTGATTCAATAGTATGGGGACAGA...GCCCTTCCTTCTGTTTACCTGGCTTGGCCTACAGGGGGCACCCCTGGTCTTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR-3UTR CAA 90 bp GATGCAGTCCCTGGATCAAAATCACCGCAGGTGAAATTCTCCATGCAGCCCCAGGCCTCCTTTAGATGCTaGTCCTGGAGATGCAATCTC +
Preference number: 3 (lower is better)
Translates to: DAVPGSKSPQVKFSMQPQASFRC*SWRCNL
Trigger: GAGATTGCATCTCCAGGACAAGCATCTAAAGGAGGC...CTGGGGCTGCATGGAGAATTTCACCTGCGGTGATTTTGATCCAGGGACTGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR CAA 90 bp GAACAATACCCCTCTGCACAGCAGGGGCCTCCTTTAGATGCTTGTCCTGGAGATTCAACAATAGCAGCTTaGGTTTCTGCAGTCCCTGGA +
Preference number: 3 (lower is better)
Translates to: EQYPSAQQGPPLDACPGDSTIAA*VSAVPG
Trigger: TCCAGGGACTGCAGAAACCAAAGCTGCTATTGTTGA...ATCTCCAGGACAAGCATCTAAAGGAGGCCCCTGCTGTGCAGAGGGGTATTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR CAA 90 bp GCCAACCAGACACAGGAGCATCAAGAGCACTACCAGAAGCCTCCCTGCTCTCTGGAAACTTTGTTTTCTTaGGATCAGAAAAGCCCTGCC +
Preference number: 3 (lower is better)
Translates to: ANQTQEHQEHYQKPPCSLETLFS*DQKSPA
Trigger: GGCAGGGCTTTTCTGATCCAAAGAAAACAAAGTTTC...CAGAGAGCAGGGAGGCTTCTGGTAGTGCTCTTGATGCTCCTGTGTCTGGTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR TCA 72 bp AAAAGCTCCCAGAAGCTATGTGCTAAGGCAAGAACCTaGGCCCTAAGAAGGGCAAAGCATGAGATGCCTGGG +
Preference number: 3 (lower is better)
Translates to: KSSQKLCAKART*ALRRAKHEMPG
Trigger: CCCAGGCATCTCATGCTTTGCCCTTCTTAGGGCTCAGGTTCTTGCCTTAGCACATAGCTTCTGGGAGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR TCA 72 bp GAGGAGATGCAGTCCCTGGATCAAAATCACCGCAGGTaGAATTCTCCATGCAGCCCCAGTAACCGTTTCTTC +
Preference number: 3 (lower is better)
Translates to: EEMQSLDQNHRR*NSPCSPSNRFF
Trigger: GAAGAAACGGTTACTGGGGCTGCATGGAGAATTTCACCTGCGGTGATTTTGATCCAGGGACTGCATCTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR-3UTR CAA 90 bp CAGGAACTCACATTTCCATTTTCTTCCTCGGCAAGTAGGATCTGGAAATCTGGTTACCAGGCCGCACCTTaGATCTGGGCCTGGAACCAT +
Preference number: 3 (lower is better)
Translates to: QELTFPFSSSASRIWKSGYQAAP*IWAWNH
Trigger: ATGGTTCCAGGCCCAGATCAAAGGTGCGGCCTGGTA...ACCAGATTTCCAGATCCTACTTGCCGAGGAAGAAAATGGAAATGTGAGTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
3UTR TCA 72 bp GGTCCACAGCTGGGAGAGTGTTCTGAGACATCGACCTaGCAGACGCTGTATATTAGAGAAGGAAGGGACTTA +
Preference number: 3 (lower is better)
Translates to: GPQLGECSETST*QTLYIREGRDL
Trigger: TAAGTCCCTTCCTTCTCTAATATACAGCGTCTGTCAGGTCGATGTCTCAGAACACTCTCCCAGCTGTGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR CCA 72 bp CCACCTCCCCCAAACCACAAGAAGTTCCTTAGATTCTaGCCAAGATGTGCAATTTTGTCTGCCATGCCTTGC +
Preference number: 3 (lower is better)
Translates to: PPPPNHKKFLRF*PRCAILSAMPC
Trigger: GCAAGGCATGGCAGACAAAATTGCACATCTTGGCCAGAATCTAAGGAACTTCTTGTGGTTTGGGGGAGGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528785.1
3UTR-3UTR CAA 90 bp GATGCACCTTTCATTTCATGTTACACAGGATCTTTGTGCCAACCAGACACAGGACCCTGCCCCACTTCCTaGGCCCTTATGAAATGCTTC +
Preference number: 3 (lower is better)
Translates to: DAPFISCYTGSLCQPDTGPCPTS*ALMKCF
Trigger: GAAGCATTTCATAAGGGCCAAGGAAGTGGGGCAGGG...TCCTGTGTCTGGTTGGCACAAAGATCCTGTGTAACATGAAATGAAAGGTGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR TCA 72 bp CTTGACCTTTGTCAGGTGCAAGTCTTATTAGTTTACTaGGAGGACTCAGTGCCCACTCCCAGACGAGAAGTC +
Preference number: 3 (lower is better)
Translates to: LDLCQVQVLLVY*EDSVPTPRREV
Trigger: GACTTCTCGTCTGGGAGTGGGCACTGAGTCCTCTCAGTAAACTAATAAGACTTGCACCTGACAAAGGTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR-3UTR CAA 90 bp CTATTTGGAAAGTTGTTTTTCACTTCAGGAGGAACAACCAAGGTGACGAGGGGTGTTCTCTCTTCTGTTTaGGCCTGTGCCAAGCCCAAG +
Preference number: 3 (lower is better)
Translates to: LFGKLFFTSGGTTKVTRGVLSSV*ACAKPK
Trigger: CTTGGGCTTGGCACAGGCCAAAACAGAAGAGAGAAC...ACCCCTCGTCACCTTGGTTGTTCCTCCTGAAGTGAAAAACAACTTTCCAAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528785.1
3UTR TCA 72 bp AGTAAACCCATACTGCAGGTTTCCCAGCCCCCAAGCTaGTGCACCTTTCATTTCATGTTACACAGGATCTTT +
Preference number: 3 (lower is better)
Translates to: SKPILQVSQPPS*CTFHFMLHRIF
Trigger: AAAGATCCTGTGTAACATGAAATGAAAGGTGCATCAGCTTGGGGGCTGGGAAACCTGCAGTATGGGTTTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
3UTR GCA 72 bp GATGCACCTTTCATTTCATGTTACACAGGATCTTTGTaGCAACCAGACACAGGAGCATCAAGAGCACTACCA +
Preference number: 3 (lower is better)
Translates to: DAPFISCYTGSL*QPDTGASRALP
Trigger: TGGTAGTGCTCTTGATGCTCCTGTGTCTGGTTGGCACAAAGATCCTGTGTAACATGAAATGAAAGGTGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR GCA 90 bp CAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCAGCCCGCGCCAAGATCCCACTaGCTCTCCGCAGCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: QPTQTAGCQHACPPAHQPAPRSH*LSAASG
Trigger: CCCGCTGGCTGCGGAGAGGCAGTGGGATCTTGGCGC...GGGCTGGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp AACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCAGCCCCCGCACCACCTTCCGGCCTGCCAGGATaGAGGGCTCCTCCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: NCRLSARLPARPPAPAPPSGLPG*RAPPGD
Trigger: GTCACCAGGAGGAGCCCTTCATCCTGGCAGGCCGGA...AGGTGGTGCGGGGGCTGGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp CAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCAGCCCGCAGGAGACCACCAGTaGCCTCCTCTCTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: QPTQTAGCQHACPPAHQPAGDHQ*PPLCSV
Trigger: CACAGAGCAGAGAGGAGGGCACTGGTGGTCTCCTGC...GGGCTGGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp CAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCAGCCCCCTGCTCCTGGGAACTaGAGCTCCAGCGCCTACATC +
Preference number: 4 (lower is better)
Translates to: QPTQTAGCQHACPPAHQPPAPGN*SSSAYI
Trigger: GATGTAGGCGCTGGAGCTCCAGTTCCCAGGAGCAGG...GGGCTGGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp AACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCAGCCCCCGCACCACCTGCCAGGAGAAAAGACTaGTTCCTGGCCGGGACAGCG +
Preference number: 4 (lower is better)
Translates to: NCRLSARLPARPPAPAPPARRKD*FLAGTA
Trigger: CGCTGTCCCGGCCAGGAACCAGTCTTTTCTCCTGGC...AGGTGGTGCGGGGGCTGGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420578.7
ENST00000496961.5
CDS-3UTR TCA 90 bp CAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCAGCCCCTCAAGCCCGGATCCTaGGGTGGGCTGAAGGAAGAT +
Preference number: 4 (lower is better)
Translates to: QPTQTAGCQHACPPAHQPLKPGS*GGLKED
Trigger: ATCTTCCTTCAGCCCACCTCAGGATCCGGGCTTGAG...GGGCTGGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp TGGCACAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCGGGGCTCCTTTGCCCTaGGAAGTGATTTCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: WHSPRKLPAVSTPARPPTGAPLP*EVISGE
Trigger: CTCCCCCGAAATCACTTCTCAGGGCAAAGGAGCCCC...GGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTGTGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp AAACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCAGCCCCCGCACCACCAGAGTGCCCTGGCACTaGGGTCTAATGGCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: KLPAVSTPARPPTSPRTTRVPWH*GLMAVQ
Trigger: CTGGACAGCCATTAGACCTCAGTGCCAGGGCACTCT...GGTGGTGCGGGGGCTGGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp AACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCAGCCCCCGCACCACCTCAAGCTGGTGAACTTTaGCTGGCCCTCCTACCCTGC +
Preference number: 4 (lower is better)
Translates to: NCRLSARLPARPPAPAPPQAGEL*LALLPC
Trigger: GCAGGGTAGGAGGGCCAGGCAAAGTTCACCAGCTTG...AGGTGGTGCGGGGGCTGGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp GCACAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCAGCTCCACAATCCGGCCTaGCAGGATGAAGGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: AQPTQTAGCQHACPPAHQLHNPA*QDEGLL
Trigger: GAGGAGCCCTTCATCCTGGCAGGCCGGATTGTGGAG...CTGGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp GCACAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCAGTCAGGGGACCTGTTTTaGTTCCTGGCCGGGACAGCG +
Preference number: 4 (lower is better)
Translates to: AQPTQTAGCQHACPPAHQSGDLF*FLAGTA
Trigger: CGCTGTCCCGGCCAGGAACCAAAACAGGTCCCCTGA...CTGGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310611.8
ENST00000430195.2
CDS-3UTR TCA 90 bp GCACAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCAGACCAGGCCGCACCTTTaGTCTGGGCCTGGAACCATA +
Preference number: 4 (lower is better)
Translates to: AQPTQTAGCQHACPPAHQTRPHL*SGPGTI
Trigger: TATGGTTCCAGGCCCAGATCAAAGGTGCGGCCTGGT...CTGGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp TGGCACAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCAGAGTGCCCTGGCACTaGGGTCTAATGGCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: WHSPRKLPAVSTPARPPTRVPWH*GLMAVQ
Trigger: CTGGACAGCCATTAGACCTCAGTGCCAGGGCACTCT...GGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTGTGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp GCACAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCAGCATCCGCCAAGGCCATaGATACAGGGTGCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: AQPTQTAGCQHACPPAHQHPPRP*IQGARR
Trigger: TCTCCTGGCACCCTGTATTCATGGCCTTGGCGGATG...CTGGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp CAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCAGCCCGGATCAGAAAAGCCCTaGCCCACTTCCTTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: QPTQTAGCQHACPPAHQPGSEKP*PTSLAL
Trigger: AAGGGCCAAGGAAGTGGGGCAGGGCTTTTCTGATCC...GGGCTGGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp TGGCACAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCGCTAAGTGGTCCACGTaGTCCACAGCTGGGAGAGTG +
Preference number: 4 (lower is better)
Translates to: WHSPRKLPAVSTPARPPTAKWST*STAGRV
Trigger: CACTCTCCCAGCTGTGGACCACGTGGACCACTTAGC...GGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTGTGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp AAACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCAGCCCCCGCACCACCTCCTATCTTCTCAACTaGGCCCAGACCACAGCTCAG +
Preference number: 4 (lower is better)
Translates to: KLPAVSTPARPPTSPRTTSYLLN*AQTTAQ
Trigger: CTGAGCTGTGGTCTGGGCTCAGTTGAGAAGATAGGA...GGTGGTGCGGGGGCTGGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp CTGCCCCTGCTCCTGGGAACTGGAGCTCCAGCGCCTACATCCCAGGCTTCCCAGTCCGGCCTGCCAGGATaGAGGGCTCCTCCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: LPLLLGTGAPAPTSQASQSGLPG*RAPPGD
Trigger: GTCACCAGGAGGAGCCCTTCATCCTGGCAGGCCGGA...CTGGGAAGCCTGGGATGTAGGCGCTGGAGCTCCAGTTCCCAGGAGCAGGGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp CGAGCCACCCTTGAGACCCTGGCTGCCCGGGGACAAAGGAGGCAGAGCCCACACTGCTGCCCCAGGATGTaGGGGCAGGTGGTGATGGAG +
Preference number: 4 (lower is better)
Translates to: RATLETLAARGQRRQSPHCCPRM*GQVVME
Trigger: CTCCATCACCACCTGCCCTCACATCCTGGGGCAGCA...GTGTGGGCTCTGCCTCCTTTGTCCCCGGGCAGCCAGGGTCTCAAGGGTGGCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp GCACAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCAGTCTGGCTTGGAGGCCTaGGAAAAAGGAGGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: AQPTQTAGCQHACPPAHQSGLEA*EKGGAL
Trigger: GAGAGCACCTCCTTTTTCTCAGGCCTCCAAGCCAGA...CTGGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp TGGCACAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCGTGGAGCCGGATCCGTaGTTTTCGGGAGCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: WHSPRKLPAVSTPARPPTVEPDP*FSGAEE
Trigger: TTCTTCTGCTCCCGAAAAGCACGGATCCGGCTCCAC...GGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTGTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp GCACAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCAGCCTGAGTCTGCTAAGTaGTCCACGTGGTCCACAGCT +
Preference number: 4 (lower is better)
Translates to: AQPTQTAGCQHACPPAHQPESAK*STWSTA
Trigger: AGCTGTGGACCACGTGGACCACTTAGCAGACTCAGG...CTGGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp TCCAGAAGACCCTCACCTGAGTCCCTTCTTTCCACAGTGCCTGACCCCCTGTGCGAGGCGAGCCACCCTTaGGACCCTGGCTGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: SRRPSPESLLSTVPDPLCEASHP*DPGCPG
Trigger: CCCCGGGCAGCCAGGGTCTCAAGGGTGGCTCGCCTC...GCACAGGGGGTCAGGCACTGTGGAAAGAAGGGACTCAGGTGAGGGTCTTCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp TGGCACAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCCAGAAGACCCTCACCTaGGTCCCTTCTTTCCACAGT +
Preference number: 4 (lower is better)
Translates to: WHSPRKLPAVSTPARPPTQKTLT*VPSFHS
Trigger: ACTGTGGAAAGAAGGGACTCAGGTGAGGGTCTTCTG...GGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTGTGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp TGGCACAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCAAGAAGGGCAAAGCATaGGATGCCTGGGGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: WHSPRKLPAVSTPARPPTKKGKA*DAWGSF
Trigger: AAAGGAGCCCCAGGCATCTCATGCTTTGCCCTTCTT...GGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTGTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp CAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCAGCCCAAAGGCAAAACAGGCTaGCCACTAGCAGCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: QPTQTAGCQHACPPAHQPKGKTG*PLAAFP
Trigger: AGGGAAAGCTGCTAGTGGTCAGCCTGTTTTGCCTTT...GGGCTGGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp CGAGCCACCCTTGAGACCCTGGCTGCCCGGGGACAAAGGAGGCAGAGCCCACACAGGAACACCTGCCCCTaGTCCTGGGAACTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: RATLETLAARGQRRQSPHRNTCP*SWELEL
Trigger: GAGCTCCAGTTCCCAGGAGCAGGGGCAGGTGTTCCT...GTGTGGGCTCTGCCTCCTTTGTCCCCGGGCAGCCAGGGTCTCAAGGGTGGCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp ACCCTTGAGACCCTGGCTGCCCGGGGACAAAGGAGGCAGAGCCCACACAGTGCCCCACCCTTGAGACCCTaGCTGCCCGGGGACAAAGGA +
Preference number: 4 (lower is better)
Translates to: TLETLAARGQRRQSPHSAPPLRP*LPGDKG
Trigger: TCCTTTGTCCCCGGGCAGCCAGGGTCTCAAGGGTGG...GGCACTGTGTGGGCTCTGCCTCCTTTGTCCCCGGGCAGCCAGGGTCTCAAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR CCA 90 bp CTGCCCCTGCTCCTGGGAACTGGAGCTCCAGCGCCTACATCCCAGGCTTCCCAGGAGCGGGGTGGTCTCTaGAGGGAAGAGAGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: LPLLLGTGAPAPTSQASQERGGL*REESPA
Trigger: GGCTGGACTCTCTTCCCTCCAGAGACCACCCCGCTC...CTGGGAAGCCTGGGATGTAGGCGCTGGAGCTCCAGTTCCCAGGAGCAGGGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp AAACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCAGCCCCCGCACCACCAGTAACCGTTTCTTCTaGGTTCACACCACACTGGAG +
Preference number: 4 (lower is better)
Translates to: KLPAVSTPARPPTSPRTTSNRFF*VHTTLE
Trigger: CTCCAGTGTGGTGTGAACTCAGAAGAAACGGTTACT...GGTGGTGCGGGGGCTGGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp GCCGCACCTTTGATCTGGGCCTGGAACCATACTGAGTACATGCCCAGAAGCACCCCTACCTCCAGGGGCTaGATGGCCGTGGCCCGCGGG +
Preference number: 4 (lower is better)
Translates to: AAPLIWAWNHTEYMPRSTPTSRG*MAVARG
Trigger: CCCGCGGGCCACGGCCATGCAGCCCCTGGAGGTAGG...GGTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGGTGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
CDS-3UTR GCA 90 bp GGGGGAGGGAAGTCCCTCCACAATCCGGCCTGCCAGGATGAAGGGCTCCTCCTGAGGAACACCTGCCCCTaGTCCTGGGAACTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: GGGKSLHNPACQDEGLLLRNTCP*SWELEL
Trigger: GAGCTCCAGTTCCCAGGAGCAGGGGCAGGTGTTCCT...CAGGAGGAGCCCTTCATCCTGGCAGGCCGGATTGTGGAGGGACTTCCCTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp AACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCAGCCCCCGCACCACCTTACACAGGATCTTTGTaGCAACCAGACACAGGAGCA +
Preference number: 4 (lower is better)
Translates to: NCRLSARLPARPPAPAPPYTGSL*QPDTGA
Trigger: TGCTCCTGTGTCTGGTTGGCACAAAGATCCTGTGTA...AGGTGGTGCGGGGGCTGGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR CCA 90 bp ATGGCTAGGGTCTGCCCTGCCCAGTGGAGCCGGATCCGTGCTTTTCGGGAGCAGTCTCGGCTCCCCAGCTaGAGCGGGAACCAGACCTAC +
Preference number: 4 (lower is better)
Translates to: MARVCPAQWSRIRAFREQSRLPS*SGNQTY
Trigger: GTAGGTCTGGTTCCCGCTCCAGCTGGGGAGCCGAGA...CTGCTCCCGAAAAGCACGGATCCGGCTCCACTGGGCAGGGCAGACCCTAGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
CDS-3UTR CCA 90 bp TGGCACAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCAGGAGATGCAGTCCCTaGATCAAAATCACCGCAGGT +
Preference number: 4 (lower is better)
Translates to: WHSPRKLPAVSTPARPPTRRCSP*IKITAG
Trigger: ACCTGCGGTGATTTTGATCCAGGGACTGCATCTCCT...GGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTGTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp GCCCAGAAGCACCGTTACTGTAGCCATCAGGTAGACCACCAGTCCACATGTCAGGAGGCGAGCCACCCTTaGGACCCTGGCTGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: AQKHRYCSHQVDHQSTCQEASHP*DPGCPG
Trigger: CCCCGGGCAGCCAGGGTCTCAAGGGTGGCTCGCCTC...CTGACATGTGGACTGGTGGTCTACCTGATGGCTACAGTAACGGTGCTTCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR TCA 90 bp CGAGCCACCCTTGAGACCCTGGCTGCCCGGGGACAAAGGAGGCAGAGCCCACACAAGGGCTCCTCCTGGTaGCCTATTCCCTACACTGCA +
Preference number: 4 (lower is better)
Translates to: RATLETLAARGQRRQSPHKGSSW*PIPYTA
Trigger: TGCAGTGTAGGGAATAGGTCACCAGGAGGAGCCCTT...GTGTGGGCTCTGCCTCCTTTGTCCCCGGGCAGCCAGGGTCTCAAGGGTGGCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp GGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCCCTACCTCCAGGGGCTaGATGGCCGTGGCCCGCGGG +
Preference number: 4 (lower is better)
Translates to: GFRIRLSITFHSYPVHLPPTSRG*MAVARG
Trigger: CCCGCGGGCCACGGCCATGCAGCCCCTGGAGGTAGG...GGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp ACCCTTGAGACCCTGGCTGCCCGGGGACAAAGGAGGCAGAGCCCACACAGTGCCGGGCAAAGCATGAGATaGCTGGGGCTCCTTTGCCCT +
Preference number: 4 (lower is better)
Translates to: TLETLAARGQRRQSPHSAGQSMR*LGLLCP
Trigger: AGGGCAAAGGAGCCCCAGGCATCTCATGCTTTGCCC...GGCACTGTGTGGGCTCTGCCTCCTTTGTCCCCGGGCAGCCAGGGTCTCAAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp CCTGCTCCTGGGAACTGGAGCTCCAGCGCCTACATCCCAGGCTTCCCAGAGTTCCCTGCCCTCCAGGCCTaGTGGTCAGAAAGGCGACAG +
Preference number: 4 (lower is better)
Translates to: PAPGNWSSSAYIPGFPEFPALQA*WSERRQ
Trigger: CTGTCGCCTTTCTGACCAGCAGGCCTGGAGGGCAGG...GAACTCTGGGAAGCCTGGGATGTAGGCGCTGGAGCTCCAGTTCCCAGGAGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp TTCAGCTGCAGCAAGGAGCGGGGTGGTCTCTGGAGGGAAGAGAGTCCAGCCCTCGACCTACAGCAGCCATaGACGGGGGTGGAAGGGTGG +
Preference number: 4 (lower is better)
Translates to: FSCSKERGGLWREESPALDLQQP*TGVEGW
Trigger: CCACCCTTCCACCCCCGTGCATGGCTGCTGTAGGTC...GAGGGCTGGACTCTCTTCCCTCCAGAGACCACCCCGCTCCTTGCTGCAGCTGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR GCA 90 bp CGAGCCACCCTTGAGACCCTGGCTGCCCGGGGACAAAGGAGGCAGAGCCCACACACTGAGAGGACTCAGTaGCCACTCCCAGACGAGAAG +
Preference number: 4 (lower is better)
Translates to: RATLETLAARGQRRQSPHTERTQ*PLPDEK
Trigger: CTTCTCGTCTGGGAGTGGGCACTGAGTCCTCTCAGT...GTGTGGGCTCTGCCTCCTTTGTCCCCGGGCAGCCAGGGTCTCAAGGGTGGCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310611.8
ENST00000430195.2
CDS-3UTR CCA 90 bp ACCCTTGAGACCCTGGCTGCCCGGGGACAAAGGAGGCAGAGCCCACACAGTGCCAGAGGAGGCCCAGGCTaGCAAGTGGTAACAGCCTAC +
Preference number: 4 (lower is better)
Translates to: TLETLAARGQRRQSPHSARGGPG*QVVTAY
Trigger: GTAGGCTGTTACCACTTGCCAGCCTGGGCCTCCTCT...GGCACTGTGTGGGCTCTGCCTCCTTTGTCCCCGGGCAGCCAGGGTCTCAAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310611.8
ENST00000430195.2
CDS-3UTR TCA 90 bp GGTCTGCCCTGCCCAGTGGAGCCGGATCCGTGCTTTTCGGGAGCAGAAGAAGAATGCCAGGACACCAGATaGGGCAGCTCACTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: GLPCPVEPDPCFSGAEEECQDTR*GSSLRV
Trigger: GACCCGCAGTGAGCTGCCTCATCTGGTGTCCTGGCA...TTCTTCTTCTGCTCCCGAAAAGCACGGATCCGGCTCCACTGGGCAGGGCAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
CDS-3UTR TCA 90 bp CCAAGTGAATACCCCAGACATGAGCAGAATAAGGGAGGTGCGGGGAACAGAGGAGAGGCGAGCCACCCTTaGGACCCTGGCTGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: PSEYPRHEQNKGGAGNRGEASHP*DPGCPG
Trigger: CCCCGGGCAGCCAGGGTCTCAAGGGTGGCTCGCCTC...TCCTCTGTTCCCCGCACCTCCCTTATTCTGCTCATGTCTGGGGTATTCACTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp GCACCTTTGATCTGGGCCTGGAACCATACTGAGTACATGCCCAGAAGCACCGTTGAGGCGAGCCACCCTTaGGACCCTGGCTGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: APLIWAWNHTEYMPRSTVEASHP*DPGCPG
Trigger: CCCCGGGCAGCCAGGGTCTCAAGGGTGGCTCGCCTC...AACGGTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR TCA 90 bp CCTGCTCCTGGGAACTGGAGCTCCAGCGCCTACATCCCAGGCTTCCCAGAGTTCGGGGAAGGTGAGGGCTaGCTGACTCAGCCTGCAAGT +
Preference number: 4 (lower is better)
Translates to: PAPGNWSSSAYIPGFPEFGEGEG*LTQPAS
Trigger: ACTTGCAGGCTGAGTCAGTCAGCCCTCACCTTCCCC...GAACTCTGGGAAGCCTGGGATGTAGGCGCTGGAGCTCCAGTTCCCAGGAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR GCA 90 bp AGACAGGAACAATACCCCTCTGCACAGCAGGGGCCTCCTTTAGATGCTTGTCCTCCTACCTCCAGGGGCTaGATGGCCGTGGCCCGCGGG +
Preference number: 4 (lower is better)
Translates to: RQEQYPSAQQGPPLDACPPTSRG*MAVARG
Trigger: CCCGCGGGCCACGGCCATGCAGCCCCTGGAGGTAGG...AGGACAAGCATCTAAAGGAGGCCCCTGCTGTGCAGAGGGGTATTGTTCCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp GGAACCATGATGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCGCAGGAACCCTACCTCCAGGGGCTaGATGGCCGTGGCCCGCGGG +
Preference number: 4 (lower is better)
Translates to: GTMMFKASVPPRFSVRRNPTSRG*MAVARG
Trigger: CCCGCGGGCCACGGCCATGCAGCCCCTGGAGGTAGG...GTTCCTGCGAACGCTGAATCTAGGTGGGACGCTTGCCTTGAACATCATGGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
CDS-3UTR GCA 90 bp AGGCAGCCCAGCCAGCAGCCTTCGGCTTGGTTAAGCCAATGCCCTCCTGCTTCTGTGCCTGACCCCCTGTaGCCTGGCACAGGGACCAAA +
Preference number: 4 (lower is better)
Translates to: RQPSQQPSAWLSQCPPASVPDPL*PGTGTK
Trigger: TTTGGTCCCTGTGCCAGGGCACAGGGGGTCAGGCAC...AGAAGCAGGAGGGCATTGGCTTAACCAAGCCGAAGGCTGCTGGCTGGGCTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp TTCAGCTGCAGCAAGGAGCGGGGTGGTCTCTGGAGGGAAGAGAGTCCAGCCCTCGCAGGAGACCACCAGTaGCCTCCTCTCTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: FSCSKERGGLWREESPALAGDHQ*PPLCSV
Trigger: CACAGAGCAGAGAGGAGGGCACTGGTGGTCTCCTGC...GAGGGCTGGACTCTCTTCCCTCCAGAGACCACCCCGCTCCTTGCTGCAGCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp TTCAGCTGCAGCAAGGAGCGGGGTGGTCTCTGGAGGGAAGAGAGTCCAGCCCTCCTCCACAATCCGGCCTaGCAGGATGAAGGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: FSCSKERGGLWREESPALLHNPA*QDEGLL
Trigger: GAGGAGCCCTTCATCCTGGCAGGCCGGATTGTGGAG...GAGGGCTGGACTCTCTTCCCTCCAGAGACCACCCCGCTCCTTGCTGCAGCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp CGAGCCACCCTTGAGACCCTGGCTGCCCGGGGACAAAGGAGGCAGAGCCCACACCCCCAGATACAGAGCTaGTCCCATTCCATACCAACC +
Preference number: 4 (lower is better)
Translates to: RATLETLAARGQRRQSPHPQIQS*SHSIPT
Trigger: GGTTGGTATGGAATGGGAGCAGCTCTGTATCTGGGG...GTGTGGGCTCTGCCTCCTTTGTCCCCGGGCAGCCAGGGTCTCAAGGGTGGCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310611.8
ENST00000430195.2
CDS-3UTR GCA 90 bp CGAGCCACCCTTGAGACCCTGGCTGCCCGGGGACAAAGGAGGCAGAGCCCACACGGATGGCTTCAGCCATaGAGAGGCAGAACTGTGAAC +
Preference number: 4 (lower is better)
Translates to: RATLETLAARGQRRQSPHGWLQP*RGRTVN
Trigger: GTTCACAGTTCTGCCTCTGCATGGCTGAAGCCATCC...GTGTGGGCTCTGCCTCCTTTGTCCCCGGGCAGCCAGGGTCTCAAGGGTGGCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp GAGGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCGGGGCTGCATGGCCGTaGCCCGCGGGCCCGTACACT +
Preference number: 4 (lower is better)
Translates to: EASGSGSPSPSTHTQYISGAAWP*PAGPYT
Trigger: AGTGTACGGGCCCGCGGGCCACGGCCATGCAGCCCC...GGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000496961.5
ENST00000533024.5
CDS-3UTR CCA 90 bp GCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCAGGGGCTGCATGGCCGTaGCCCGCGGGCCCGTACACT +
Preference number: 4 (lower is better)
Translates to: ASGSGSPSPSTHTQYISPGAAWP*PAGPYT
Trigger: AGTGTACGGGCCCGCGGGCCACGGCCATGCAGCCCC...TGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000496961.5
ENST00000533024.5
CDS-3UTR CCA 90 bp AGGCAGCCCAGCCAGCAGCCTTCGGCTTGGTTAAGCCAATGCCCTCCTGCTTCTCCACCCTTGAGACCCTaGCTGCCCGGGGACAAAGGA +
Preference number: 4 (lower is better)
Translates to: RQPSQQPSAWLSQCPPASPPLRP*LPGDKG
Trigger: TCCTTTGTCCCCGGGCAGCCAGGGTCTCAAGGGTGG...AGAAGCAGGAGGGCATTGGCTTAACCAAGCCGAAGGCTGCTGGCTGGGCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp ATGGCTAGGGTCTGCCCTGCCCAGTGGAGCCGGATCCGTGCTTTTCGGGAGCAGCATGATCACCAGGGCTaGATAGACGGGCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: MARVCPAQWSRIRAFREQHDHQG*IDGQCQ
Trigger: CTGGCACTGCCCGTCTATCCAGCCCTGGTGATCATG...CTGCTCCCGAAAAGCACGGATCCGGCTCCACTGGGCAGGGCAGACCCTAGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
CDS-3UTR CCA 90 bp CCCAGACATGAGCAGAATAAGGGAGGTGCGGGGAACAGAGGATGGCGGAGGAGGCAGAAAGGCGACAGCTaGGGCCCCTTCCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: PRHEQNKGGAGNRGWRRRQKGDS*GPFLLQ
Trigger: CTGCAGGAGGAAGGGGCCCCAGCTGTCGCCTTTCTG...CCTCCTCCGCCATCCTCTGTTCCCCGCACCTCCCTTATTCTGCTCATGTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp GCATCCAGTCCTCACCACCGAGGGCAGCCTGGGGAACTACTTTCAGCTGCAGCAGGGGAAGGTGAGGGCTaGCTGACTCAGCCTGCAAGT +
Preference number: 4 (lower is better)
Translates to: ASSPHHRGQPGELLSAAAGEGEG*LTQPAS
Trigger: ACTTGCAGGCTGAGTCAGTCAGCCCTCACCTTCCCC...TGCTGCAGCTGAAAGTAGTTCCCCAGGCTGCCCTCGGTGGTGAGGACTGGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR GCA 90 bp TTCAGCTGCAGCAAGGAGCGGGGTGGTCTCTGGAGGGAAGAGAGTCCAGCCCTCGGGCAAAGCATGAGATaGCTGGGGCTCCTTTGCCCT +
Preference number: 4 (lower is better)
Translates to: FSCSKERGGLWREESPALGQSMR*LGLLCP
Trigger: AGGGCAAAGGAGCCCCAGGCATCTCATGCTTTGCCC...GAGGGCTGGACTCTCTTCCCTCCAGAGACCACCCCGCTCCTTGCTGCAGCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp CGAGCCACCCTTGAGACCCTGGCTGCCCGGGGACAAAGGAGGCAGAGCCCACACACCTATTCCCTACACTaGAGTCAGACCAGGCTAAGC +
Preference number: 4 (lower is better)
Translates to: RATLETLAARGQRRQSPHTYSLH*SQTRLS
Trigger: GCTTAGCCTGGTCTGACTGCAGTGTAGGGAATAGGT...GTGTGGGCTCTGCCTCCTTTGTCCCCGGGCAGCCAGGGTCTCAAGGGTGGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp CTTAGCTGGGCTAGGCAGCCCAGCCAGCAGCCTTCGGCTTGGTTAAGCCAATGCCTCCACAATCCGGCCTaGCAGGATGAAGGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: LSWARQPSQQPSAWLSQCLHNPA*QDEGLL
Trigger: GAGGAGCCCTTCATCCTGGCAGGCCGGATTGTGGAG...GCATTGGCTTAACCAAGCCGAAGGCTGCTGGCTGGGCTGCCTAGCCCAGCTAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp GCATCCAGTCCTCACCACCGAGGGCAGCCTGGGGAACTACTTTCAGCTGCAGCACCAAGATTCTGCCACTaGACTCCAGCCTGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: ASSPHHRGQPGELLSAAAPRFCH*TPAWRQ
Trigger: CTGCCGCCAGGCTGGAGTGCAGTGGCAGAATCTTGG...TGCTGCAGCTGAAAGTAGTTCCCCAGGCTGCCCTCGGTGGTGAGGACTGGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR CCA 90 bp TCTAAGCTACCCGGAGAGGAGGACCTGAATCTTCAGAAGACCAAGGACATCCACGGGGCTGCATGGCCGTaGCCCGCGGGCCCGTACACT +
Preference number: 4 (lower is better)
Translates to: SKLPGEEDLNLQKTKDIHGAAWP*PAGPYT
Trigger: AGTGTACGGGCCCGCGGGCCACGGCCATGCAGCCCC...GTGGATGTCCTTGGTCTTCTGAAGATTCAGGTCCTCCTCTCCGGGTAGCTTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000496961.5
CDS-3UTR CCA 90 bp ATCAAGACCAGGGGTGCCCCCTGTAGGCCAAGCCAGGTAAACAGAAGGAAGGGCTCTCGGCTCCCCAGCTaGAGCGGGAACCAGACCTAC +
Preference number: 4 (lower is better)
Translates to: IKTRGAPCRPSQVNRRKGSRLPS*SGNQTY
Trigger: GTAGGTCTGGTTCCCGCTCCAGCTGGGGAGCCGAGA...GCCCTTCCTTCTGTTTACCTGGCTTGGCCTACAGGGGGCACCCCTGGTCTTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR CCA 90 bp GCATCCAGTCCTCACCACCGAGGGCAGCCTGGGGAACTACTTTCAGCTGCAGCACCACCGAGGGCAGCCTaGGGAACTACTTTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: ASSPHHRGQPGELLSAAAPPRAA*GTTFSC
Trigger: GCAGCTGAAAGTAGTTCCCCAGGCTGCCCTCGGTGG...TGCTGCAGCTGAAAGTAGTTCCCCAGGCTGCCCTCGGTGGTGAGGACTGGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp CTCCACAATCCGGCCTGCCAGGATGAAGGGCTCCTCCTGGTGACCTATTCCCTAGCCCTCCAGGCCTGCTaGTCAGAAAGGCGACAGCTG +
Preference number: 4 (lower is better)
Translates to: LHNPACQDEGLLLVTYSLALQAC*SERRQL
Trigger: CAGCTGTCGCCTTTCTGACCAGCAGGCCTGGAGGGC...TAGGGAATAGGTCACCAGGAGGAGCCCTTCATCCTGGCAGGCCGGATTGTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp GCATCCAGTCCTCACCACCGAGGGCAGCCTGGGGAACTACTTTCAGCTGCAGCAAGGAGCCCATGCAGCTaGGAGCCACTGAGATCCCAG +
Preference number: 4 (lower is better)
Translates to: ASSPHHRGQPGELLSAAARSPCS*EPLRSQ
Trigger: CTGGGATCTCAGTGGCTCCCAGCTGCATGGGCTCCT...TGCTGCAGCTGAAAGTAGTTCCCCAGGCTGCCCTCGGTGGTGAGGACTGGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
3UTR CAA 72 bp GGGTGGTCTCTGGAGGGAAGAGAGTCCAGCCCTCATTaGCCAGCTGGCACCAAACTCAGCCCCCTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: GWSLEGRESSPH*PAGTKLSPLLD
Trigger: GTCCAAGAGGGGGCTGAGTTTGGTGCCAGCTGGCAAATGAGGGCTGGACTCTCTTCCCTCCAGAGACCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp GCCGCACCTTTGATCTGGGCCTGGAACCATACTGAGTACATGCCCAGAAGCACCTGCCAGGACACCAGATaGGGCAGCTCACTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: AAPLIWAWNHTEYMPRSTCQDTR*GSSLRV
Trigger: GACCCGCAGTGAGCTGCCTCATCTGGTGTCCTGGCA...GGTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGGTGCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR TCA 90 bp CTCTCATCAAGTAGAGGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACGAGGCGAGCCACCCTTaGGACCCTGGCTGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: LSSSRGFRIRLSITFHSYEASHP*DPGCPG
Trigger: CCCCGGGCAGCCAGGGTCTCAAGGGTGGCTCGCCTC...GTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCCTCTACTTGATGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000533024.5
CDS-3UTR TCA 90 bp CAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATTTTGAGGCGAGCCACCCTTaGGACCCTGGCTGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: QDQALHHLPLIPSTSPHFEASHP*DPGCPG
Trigger: CCCCGGGCAGCCAGGGTCTCAAGGGTGGCTCGCCTC...AAAATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000533024.5
CDS-3UTR TCA 90 bp ACCCTTGAGACCCTGGCTGCCCGGGGACAAAGGAGGCAGAGCCCACACAGTGCCTGGAAATCTGGTGCATaGTCACCAGGGCTGGATAGA +
Preference number: 4 (lower is better)
Translates to: TLETLAARGQRRQSPHSAWKSGA*SPGLDR
Trigger: TCTATCCAGCCCTGGTGATCATGCACCAGATTTCCA...GGCACTGTGTGGGCTCTGCCTCCTTTGTCCCCGGGCAGCCAGGGTCTCAAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR TCA 90 bp GCCGCACCTTTGATCTGGGCCTGGAACCATACTGAGTACATGCCCAGAAGCACCTGCTGCCCCAGGATGTaGGGGCAGGTGGTGATGGAG +
Preference number: 4 (lower is better)
Translates to: AAPLIWAWNHTEYMPRSTCCPRM*GQVVME
Trigger: CTCCATCACCACCTGCCCTCACATCCTGGGGCAGCA...GGTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGGTGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp AGGCAGCCCAGCCAGCAGCCTTCGGCTTGGTTAAGCCAATGCCCTCCTGCTTCTAGAGTGCCCTGGCACTaGGGTCTAATGGCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: RQPSQQPSAWLSQCPPASRVPWH*GLMAVQ
Trigger: CTGGACAGCCATTAGACCTCAGTGCCAGGGCACTCT...AGAAGCAGGAGGGCATTGGCTTAACCAAGCCGAAGGCTGCTGGCTGGGCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp GCACCTTTGATCTGGGCCTGGAACCATACTGAGTACATGCCCAGAAGCACCGTTGCGCCAAGATCCCACTaGCTCTCCGCAGCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: APLIWAWNHTEYMPRSTVAPRSH*LSAASG
Trigger: CCCGCTGGCTGCGGAGAGGCAGTGGGATCTTGGCGC...AACGGTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
CDS-3UTR GCA 90 bp GAGGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCGCGCCAAGATCCCACTaGCTCTCCGCAGCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: EASGSGSPSPSTHTQYISAPRSH*LSAASG
Trigger: CCCGCTGGCTGCGGAGAGGCAGTGGGATCTTGGCGC...GGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp CATGCCCAGAAGCACCGTTACTGTAGCCATCAGGTAGACCACCAGTCCACATGTGCGCCAAGATCCCACTaGCTCTCCGCAGCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: HAQKHRYCSHQVDHQSTCAPRSH*LSAASG
Trigger: CCCGCTGGCTGCGGAGAGGCAGTGGGATCTTGGCGC...ACATGTGGACTGGTGGTCTACCTGATGGCTACAGTAACGGTGCTTCTGGGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
CDS-3UTR GCA 90 bp CTGCCCCTGCTCCTGGGAACTGGAGCTCCAGCGCCTACATCCCAGGCTTCCCAGGATCTGGAAATCTGGTaGATGATCACCAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: LPLLLGTGAPAPTSQASQDLEIW*MITRAG
Trigger: TCCAGCCCTGGTGATCATGCACCAGATTTCCAGATC...CTGGGAAGCCTGGGATGTAGGCGCTGGAGCTCCAGTTCCCAGGAGCAGGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp AGGCAGCCCAGCCAGCAGCCTTCGGCTTGGTTAAGCCAATGCCCTCCTGCTTCTTGCTTGTCCTGGAGATaGAATCTCCCCCAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: RQPSQQPSAWLSQCPPASCLSWR*NLPQEG
Trigger: CCCCTCCTGGGGGAGATTGCATCTCCAGGACAAGCA...AGAAGCAGGAGGGCATTGGCTTAACCAAGCCGAAGGCTGCTGGCTGGGCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp GGGGAGGGAAGTCCCTCCACAATCCGGCCTGCCAGGATGAAGGGCTCCTCCTGGCAGGCTTTACGGCATTaGCTGCTTGCTCTTAGAGCA +
Preference number: 4 (lower is better)
Translates to: GEGSPSTIRPARMKGSSWQALRH*LLALRA
Trigger: TGCTCTAAGAGCAAGCAGGCAATGCCGTAAAGCCTG...CCAGGAGGAGCCCTTCATCCTGGCAGGCCGGATTGTGGAGGGACTTCCCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp GCCAACCAGACACAGGAGCATCAAGAGCACTACCAGAAGCCTCCCTGCTCTCTGACAGCCCACGCAAACTaGCGGCTGTCAGCACGCCTG +
Preference number: 4 (lower is better)
Translates to: ANQTQEHQEHYQKPPCSLTAHAN*RLSARL
Trigger: CAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTGT...CAGAGAGCAGGGAGGCTTCTGGTAGTGCTCTTGATGCTCCTGTGTCTGGTTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR GCA 90 bp CAGCACCTCAGGCAGGCTCAGGCTTTACGGCATTGCCTGCTTGCTCTTAGAGCACCTGCCCTCCAGGCCTaGTGGTCAGAAAGGCGACAG +
Preference number: 4 (lower is better)
Translates to: QHLRQAQALRHCLLALRAPALQA*WSERRQ
Trigger: CTGTCGCCTTTCTGACCAGCAGGCCTGGAGGGCAGG...TGCTCTAAGAGCAAGCAGGCAATGCCGTAAAGCCTGAGCCTGCCTGAGGTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp AATAGACATCAGATGGCACAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCCTCCACAATCCGGCCTaGCAGGATGAAGGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: NRHQMAQPTQTAGCQHACLHNPA*QDEGLL
Trigger: GAGGAGCCCTTCATCCTGGCAGGCCGGATTGTGGAG...GCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTGTGCCATCTGATGTCTATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp TTCAGCTGCAGCAAGGAGCGGGGTGGTCTCTGGAGGGAAGAGAGTCCAGCCCTCCAGACGAGAAGTCACTaGAAGGCGTGGCTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: FSCSKERGGLWREESPALQTRSH*KAWLAA
Trigger: TGCTGCTAGCCACGCCTTGCAGTGACTTCTCGTCTG...GAGGGCTGGACTCTCTTCCCTCCAGAGACCACCCCGCTCCTTGCTGCAGCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR CCA 90 bp ATGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCGCAGGAACTCACATTTCGGGGCTGCATGGCCGTaGCCCGCGGGCCCGTACACT +
Preference number: 4 (lower is better)
Translates to: MFKASVPPRFSVRRNSHFGAAWP*PAGPYT
Trigger: AGTGTACGGGCCCGCGGGCCACGGCCATGCAGCCCC...GAAATGTGAGTTCCTGCGAACGCTGAATCTAGGTGGGACGCTTGCCTTGAACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR CCA 90 bp TCCAGAAGACCCTCACCTGAGTCCCTTCTTTCCACAGTGCCTGACCCCCTGTGCGTCTGCCCTGCCCAGTaGAGCCGGATCCGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: SRRPSPESLLSTVPDPLCVCPAQ*SRIRAF
Trigger: AAAAGCACGGATCCGGCTCCACTGGGCAGGGCAGAC...GCACAGGGGGTCAGGCACTGTGGAAAGAAGGGACTCAGGTGAGGGTCTTCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp GCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCAAGCCCCCGCACCACCTaGGAGGAGGCAGCACCTCAG +
Preference number: 4 (lower is better)
Translates to: ASGSGSPSPSTHTQYISPSPRTT*EEAAPQ
Trigger: CTGAGGTGCTGCCTCCTCCCAGGTGGTGCGGGGGCT...TGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp GATGCAGTCCCTGGATCAAAATCACCGCAGGTGAAATTCTCCATGCAGCCCCAGAGCCCCCGCACCACCTaGGAGGAGGCAGCACCTCAG +
Preference number: 4 (lower is better)
Translates to: DAVPGSKSPQVKFSMQPQSPRTT*EEAAPQ
Trigger: CTGAGGTGCTGCCTCCTCCCAGGTGGTGCGGGGGCT...CTGGGGCTGCATGGAGAATTTCACCTGCGGTGATTTTGATCCAGGGACTGCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp GCTACCCGGAGAGGAGGACCTGAATCTTCAGAAGACCAAGGACATCCACAACACAGCCCCCGCACCACCTaGGAGGAGGCAGCACCTCAG +
Preference number: 4 (lower is better)
Translates to: ATRRGGPESSEDQGHPQHSPRTT*EEAAPQ
Trigger: CTGAGGTGCTGCCTCCTCCCAGGTGGTGCGGGGGCT...GTGTTGTGGATGTCCTTGGTCTTCTGAAGATTCAGGTCCTCCTCTCCGGGTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp CATGCCCAGAAGCACCGTTACTGTAGCCATCAGGTAGACCACCAGTCCACATGTAGCCCCCGCACCACCTaGGAGGAGGCAGCACCTCAG +
Preference number: 4 (lower is better)
Translates to: HAQKHRYCSHQVDHQSTCSPRTT*EEAAPQ
Trigger: CTGAGGTGCTGCCTCCTCCCAGGTGGTGCGGGGGCT...ACATGTGGACTGGTGGTCTACCTGATGGCTACAGTAACGGTGCTTCTGGGCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp AGGGGTGGAGCTACTGCACAACCAGCCACATCAGACAAGTCAACCTTGGCAGTCTGCCAGGACACCAGATaGGGCAGCTCACTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: RGGATAQPATSDKSTLAVCQDTR*GSSLRV
Trigger: GACCCGCAGTGAGCTGCCTCATCTGGTGTCCTGGCA...GACTGCCAAGGTTGACTTGTCTGATGTGGCTGGTTGTGCAGTAGCTCCACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR TCA 90 bp TTCTGCAGTCCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTAAATGAGGCGAGCCACCCTTaGGACCCTGGCTGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: FCSPWTSQEVRKPDHFLNEASHP*DPGCPG
Trigger: CCCCGGGCAGCCAGGGTCTCAAGGGTGGCTCGCCTC...ATTTAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGGACTGCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR TCA 90 bp GAGGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCTCCGGCCTGCCAGGATaGAGGGCTCCTCCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: EASGSGSPSPSTHTQYISSGLPG*RAPPGD
Trigger: GTCACCAGGAGGAGCCCTTCATCCTGGCAGGCCGGA...GGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp TCTAAGCTACCCGGAGAGGAGGACCTGAATCTTCAGAAGACCAAGGACATCCACGCGCCAAGATCCCACTaGCTCTCCGCAGCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: SKLPGEEDLNLQKTKDIHAPRSH*LSAASG
Trigger: CCCGCTGGCTGCGGAGAGGCAGTGGGATCTTGGCGC...GTGGATGTCCTTGGTCTTCTGAAGATTCAGGTCCTCCTCTCCGGGTAGCTTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp AATAGACATCAGATGGCACAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCCCCAAAGCTACCAGGTaGGCCAAGATCCCACTGCCT +
Preference number: 4 (lower is better)
Translates to: NRHQMAQPTQTAGCQHACPKATR*AKIPLP
Trigger: AGGCAGTGGGATCTTGGCGCACCTGGTAGCTTTGGG...GCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTGTGCCATCTGATGTCTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp GCTACCCGGAGAGGAGGACCTGAATCTTCAGAAGACCAAGGACATCCACAACACAGGATGGCTAGGGTCTaGCCTGCCCAGTGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: ATRRGGPESSEDQGHPQHRMARV*PAQWSR
Trigger: CCGGCTCCACTGGGCAGGGCAGACCCTAGCCATCCT...GTGTTGTGGATGTCCTTGGTCTTCTGAAGATTCAGGTCCTCCTCTCCGGGTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp CTGTTTTGGCCTGTGCCAAGCCCAAGGAAGTCCATGGCTGCATCTCTTCAACACAGGATGGCTAGGGTCTaGCCTGCCCAGTGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: LFWPVPSPRKSMAASLQHRMARV*PAQWSR
Trigger: CCGGCTCCACTGGGCAGGGCAGACCCTAGCCATCCT...GTGTTGAAGAGATGCAGCCATGGACTTCCTTGGGCTTGGCACAGGCCAAAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR GCA 90 bp TGGCACAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCTCCACTACATCACACTaGTTTCTTAAAAGTAACCCA +
Preference number: 4 (lower is better)
Translates to: WHSPRKLPAVSTPARPPTSTTSH*FLKSNP
Trigger: TGGGTTACTTTTAAGAAAGCAGTGTGATGTAGTGGA...GGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp GCATCCAGTCCTCACCACCGAGGGCAGCCTGGGGAACTACTTTCAGCTGCAGCAGGATCAGAAAAGCCCTaGCCCACTTCCTTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: ASSPHHRGQPGELLSAAAGSEKP*PTSLAL
Trigger: AAGGGCCAAGGAAGTGGGGCAGGGCTTTTCTGATCC...TGCTGCAGCTGAAAGTAGTTCCCCAGGCTGCCCTCGGTGGTGAGGACTGGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp CCTGCTCCTGGGAACTGGAGCTCCAGCGCCTACATCCCAGGCTTCCCAGAGTTCGCTGTTGTCAGGCCTTaGCATGATCTAGGGAGATCC +
Preference number: 4 (lower is better)
Translates to: PAPGNWSSSAYIPGFPEFAVVRP*HDLGRS
Trigger: GGATCTCCCTAGATCATGGCAAGGCCTGACAACAGC...GAACTCTGGGAAGCCTGGGATGTAGGCGCTGGAGCTCCAGTTCCCAGGAGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp CTCCACAATCCGGCCTGCCAGGATGAAGGGCTCCTCCTGGTGACCTATTCCCTAGGACACTTCTGCCCTTaGTGTCCCCATTCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: LHNPACQDEGLLLVTYSLGHFCP*CPHSVP
Trigger: GGGGACAGAATGGGGACAGCAAGGGCAGAAGTGTCC...TAGGGAATAGGTCACCAGGAGGAGCCCTTCATCCTGGCAGGCCGGATTGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp GGTCTGCCCTGCCCAGTGGAGCCGGATCCGTGCTTTTCGGGAGCAGAAGAAGAAGGAACAATACCCCTCTaGACAGCAGGGGCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: GLPCPVEPDPCFSGAEEEGTIPL*TAGASF
Trigger: AAAGGAGGCCCCTGCTGTGCAGAGGGGTATTGTTCC...TTCTTCTTCTGCTCCCGAAAAGCACGGATCCGGCTCCACTGGGCAGGGCAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp CTTAAGAGCCAAGAAGGTGAGGCTGGAGGACTTCCCCAGATACAGAGCTGCTCCGACCTACAGCAGCCATaGACGGGGGTGGAAGGGTGG +
Preference number: 4 (lower is better)
Translates to: LKSQEGEAGGLPQIQSCSDLQQP*TGVEGW
Trigger: CCACCCTTCCACCCCCGTGCATGGCTGCTGTAGGTC...GGAGCAGCTCTGTATCTGGGGAAGTCCTCCAGCCTCACCTTCTTGGCTCTTAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR CCA 90 bp GTGACGAGGGGTGGAGCTACTGCACAACCAGCCACATCAGACAAGTCAACCTTGGAGCTGCACAGAGGATaGCTAGGGTCTGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: VTRGGATAQPATSDKSTLELHRG*LGSALP
Trigger: GGGCAGGGCAGACCCTAGCCATCCTCTGTGCAGCTC...CAAGGTTGACTTGTCTGATGTGGCTGGTTGTGCAGTAGCTCCACCCCTCGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR CCA 90 bp CTTAGCTGGGCTAGGCAGCCCAGCCAGCAGCCTTCGGCTTGGTTAAGCCAATGCCAGCAGCCTTCGGCTTaGTTAAGCCAATGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LSWARQPSQQPSAWLSQCQQPSA*LSQCPP
Trigger: AGGAGGGCATTGGCTTAACCAAGCCGAAGGCTGCTG...GCATTGGCTTAACCAAGCCGAAGGCTGCTGGCTGGGCTGCCTAGCCCAGCTAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp AATAGACATCAGATGGCACAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCCCCTCATTTGCCAGCTaGCACCAAACTCAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: NRHQMAQPTQTAGCQHACPSFAS*HQTQPP
Trigger: AGGGGGCTGAGTTTGGTGCCAGCTGGCAAATGAGGG...GCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTGTGCCATCTGATGTCTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp GCTACCCGGAGAGGAGGACCTGAATCTTCAGAAGACCAAGGACATCCACAACACACCTGCCCCTGCTCCTaGGAACTGGAGCTCCAGCGC +
Preference number: 4 (lower is better)
Translates to: ATRRGGPESSEDQGHPQHTCPCS*ELELQR
Trigger: GCGCTGGAGCTCCAGTTCCCAGGAGCAGGGGCAGGT...GTGTTGTGGATGTCCTTGGTCTTCTGAAGATTCAGGTCCTCCTCTCCGGGTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp AAGAACTACCCCCTGAGTCTGCTAAGTGGTCCACGTGGTCCACAGCTGGGAGAGCTGGTGAACTTTGCCTaGCCCTCCTACCCTGCGGCA +
Preference number: 4 (lower is better)
Translates to: KNYPLSLLSGPRGPQLGELVNFA*PSYPAA
Trigger: TGCCGCAGGGTAGGAGGGCCAGGCAAAGTTCACCAG...CTCTCCCAGCTGTGGACCACGTGGACCACTTAGCAGACTCAGGGGGTAGTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp GCCCCCTGTAGGCCAAGCCAGGTAAACAGAAGGAAGGGCAGGAGTACTGGAAGTCTGGTGAACTTTGCCTaGCCCTCCTACCCTGCGGCA +
Preference number: 4 (lower is better)
Translates to: APCRPSQVNRRKGRSTGSLVNFA*PSYPAA
Trigger: TGCCGCAGGGTAGGAGGGCCAGGCAAAGTTCACCAG...ACTTCCAGTACTCCTGCCCTTCCTTCTGTTTACCTGGCTTGGCCTACAGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR CCA 90 bp GAACTACTTTCAGCTGCAGCAAGGAGCGGGGTGGTCTCTGGAGGGAAGAGAGTCAGCCATGCACGGGGGTaGAAGGGTGGGACGATGAGA +
Preference number: 4 (lower is better)
Translates to: ELLSAAARSGVVSGGKRVSHARG*KGGTMR
Trigger: TCTCATCGTCCCACCCTTCCACCCCCGTGCATGGCT...GACTCTCTTCCCTCCAGAGACCACCCCGCTCCTTGCTGCAGCTGAAAGTAGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR TCA 90 bp GGAACCATGATGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCGCAGGAACTGCCAGGACACCAGATaGGGCAGCTCACTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: GTMMFKASVPPRFSVRRNCQDTR*GSSLRV
Trigger: GACCCGCAGTGAGCTGCCTCATCTGGTGTCCTGGCA...GTTCCTGCGAACGCTGAATCTAGGTGGGACGCTTGCCTTGAACATCATGGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR TCA 90 bp TTCCTTAGATTCTGGCCAAGATGTGCAATTTTGTCTGCCATGCCTTGCAGCACTGAGGCGAGCCACCCTTaGGACCCTGGCTGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: FLRFWPRCAILSAMPCSTEASHP*DPGCPG
Trigger: CCCCGGGCAGCCAGGGTCTCAAGGGTGGCTCGCCTC...AGTGCTGCAAGGCATGGCAGACAAAATTGCACATCTTGGCCAGAATCTAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR TCA 90 bp CCTGCTCCTGGGAACTGGAGCTCCAGCGCCTACATCCCAGGCTTCCCAGAGTTCATCAGCACAAATTTCTaGAGGGCCTCAAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: PAPGNWSSSAYIPGFPEFISTNF*RASRAE
Trigger: CTCTGCCCTTGAGGCCCTTCAGAAATTTGTGCTGAT...GAACTCTGGGAAGCCTGGGATGTAGGCGCTGGAGCTCCAGTTCCCAGGAGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp AATAGACATCAGATGGCACAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCGATCCTGAGGTGGGCTaGAGGAAGATCTTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: NRHQMAQPTQTAGCQHACDPEVG*RKILAG
Trigger: CCCAGCTAAGATCTTCCTTCAGCCCACCTCAGGATC...GCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTGTGCCATCTGATGTCTATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp GCCAACCAGACACAGGAGCATCAAGAGCACTACCAGAAGCCTCCCTGCTCTCTGCTCAAGCCCGGATCCTaGGGTGGGCTGAAGGAAGAT +
Preference number: 4 (lower is better)
Translates to: ANQTQEHQEHYQKPPCSLLKPGS*GGLKED
Trigger: ATCTTCCTTCAGCCCACCTCAGGATCCGGGCTTGAG...CAGAGAGCAGGGAGGCTTCTGGTAGTGCTCTTGATGCTCCTGTGTCTGGTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR TCA 90 bp CCCAGACATGAGCAGAATAAGGGAGGTGCGGGGAACAGAGGATGGCGGAGGAGGTCCTATCTTCTCAACTaGGCCCAGACCACAGCTCAG +
Preference number: 4 (lower is better)
Translates to: PRHEQNKGGAGNRGWRRRSYLLN*AQTTAQ
Trigger: CTGAGCTGTGGTCTGGGCTCAGTTGAGAAGATAGGA...CCTCCTCCGCCATCCTCTGTTCCCCGCACCTCCCTTATTCTGCTCATGTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp CCTGCTCCTGGGAACTGGAGCTCCAGCGCCTACATCCCAGGCTTCCCAGAGTTCAAAGGCAAAACAGGCTaGCCACTAGCAGCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: PAPGNWSSSAYIPGFPEFKGKTG*PLAAFP
Trigger: AGGGAAAGCTGCTAGTGGTCAGCCTGTTTTGCCTTT...GAACTCTGGGAAGCCTGGGATGTAGGCGCTGGAGCTCCAGTTCCCAGGAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp CCCAGACATGAGCAGAATAAGGGAGGTGCGGGGAACAGAGGATGGCGGAGGAGGCTTGGGAGGGGTATCTaGACCCAGAAGGGTAATCTC +
Preference number: 4 (lower is better)
Translates to: PRHEQNKGGAGNRGWRRRLGRGI*TQKGNL
Trigger: GAGATTACCCTTCTGGGTTCAGATACCCCTCCCAAG...CCTCCTCCGCCATCCTCTGTTCCCCGCACCTCCCTTATTCTGCTCATGTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR TCA 90 bp CTGCCCCTGCTCCTGGGAACTGGAGCTCCAGCGCCTACATCCCAGGCTTCCCAGGTTCCCTACATATCTTaGCCTTTGTCAGGTGCAAGT +
Preference number: 4 (lower is better)
Translates to: LPLLLGTGAPAPTSQASQVPYIS*PLSGAS
Trigger: ACTTGCACCTGACAAAGGTCAAGATATGTAGGGAAC...CTGGGAAGCCTGGGATGTAGGCGCTGGAGCTCCAGTTCCCAGGAGCAGGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR GCA 90 bp AGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATTTTGACCCACAGGATGGCTAGGGTCTaGCCTGCCCAGTGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: RLSITFHSYPVHLPILTHRMARV*PAQWSR
Trigger: CCGGCTCCACTGGGCAGGGCAGACCCTAGCCATCCT...GTGGGTCAAAATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000533024.5
CDS-3UTR GCA 90 bp TTGGTTTCTGCAGTCCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTAGGATGGCTAGGGTCTaGCCTGCCCAGTGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: LVSAVPGPAKKCENLTTSRMARV*PAQWSR
Trigger: CCGGCTCCACTGGGCAGGGCAGACCCTAGCCATCCT...AGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGGACTGCAGAAACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR GCA 90 bp CTTAAGAGCCAAGAAGGTGAGGCTGGAGGACTTCCCCAGATACAGAGCTGCTCCTGGATAGACGGGCAGTaGCAGGCACAGGTACCAGGC +
Preference number: 4 (lower is better)
Translates to: LKSQEGEAGGLPQIQSCSWIDGQ*QAQVPG
Trigger: GCCTGGTACCTGTGCCTGGCACTGCCCGTCTATCCA...GGAGCAGCTCTGTATCTGGGGAAGTCCTCCAGCCTCACCTTCTTGGCTCTTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR GCA 90 bp CACAGGTACCAGGCCGCACCTTTGATCTGGGCCTGGAACCATACTGAGTACATGTGGATAGACGGGCAGTaGCAGGCACAGGTACCAGGC +
Preference number: 4 (lower is better)
Translates to: HRYQAAPLIWAWNHTEYMWIDGQ*QAQVPG
Trigger: GCCTGGTACCTGTGCCTGGCACTGCCCGTCTATCCA...CATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGGTGCGGCCTGGTACCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR GCA 90 bp ACCAAATCAGCACAAATTTCTGAAGGGCCTCAAGGGCAGAGCTGTCCCTCCAGGGTGCCTGACCCCCTGTaGCCTGGCACAGGGACCAAA +
Preference number: 4 (lower is better)
Translates to: TKSAQISEGPQGQSCPSRVPDPL*PGTGTK
Trigger: TTTGGTCCCTGTGCCAGGGCACAGGGGGTCAGGCAC...CCTGGAGGGACAGCTCTGCCCTTGAGGCCCTTCAGAAATTTGTGCTGATTTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp GGATCTGGAAATCTGGTGCATGATCACCAGGGCTGGATAGACGGGCAGTGCCAGCAAGCTGGTGAACTTTaGCTGGCCCTCCTACCCTGC +
Preference number: 4 (lower is better)
Translates to: GSGNLVHDHQGWIDGQCQQAGEL*LALLPC
Trigger: GCAGGGTAGGAGGGCCAGGCAAAGTTCACCAGCTTG...CTGGCACTGCCCGTCTATCCAGCCCTGGTGATCATGCACCAGATTTCCAGATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp CTGGCTGTGATGAGGAAAGAGGAGATGCAGTCCCTGGATCAAAATCACCGCAGGACAGCCCACGCAAACTaGCGGCTGTCAGCACGCCTG +
Preference number: 4 (lower is better)
Translates to: LAVMRKEEMQSLDQNHRRTAHAN*RLSARL
Trigger: CAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTGT...CCTGCGGTGATTTTGATCCAGGGACTGCATCTCCTCTTTCCTCATCACAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp GATGCAGTCCCTGGATCAAAATCACCGCAGGTGAAATTCTCCATGCAGCCCCAGACAGCCCACGCAAACTaGCGGCTGTCAGCACGCCTG +
Preference number: 4 (lower is better)
Translates to: DAVPGSKSPQVKFSMQPQTAHAN*RLSARL
Trigger: CAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTGT...CTGGGGCTGCATGGAGAATTTCACCTGCGGTGATTTTGATCCAGGGACTGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp GCACCTTTGATCTGGGCCTGGAACCATACTGAGTACATGCCCAGAAGCACCGTTGACCTACAGCAGCCATaGACGGGGGTGGAAGGGTGG +
Preference number: 4 (lower is better)
Translates to: APLIWAWNHTEYMPRSTVDLQQP*TGVEGW
Trigger: CCACCCTTCCACCCCCGTGCATGGCTGCTGTAGGTC...AACGGTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310611.8
ENST00000430195.2
CDS-3UTR GCA 90 bp ATCAAGACCAGGGGTGCCCCCTGTAGGCCAAGCCAGGTAAACAGAAGGAAGGGCTACCAGAAGCCTCCCTaGTCTCTGAGCTTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: IKTRGAPCRPSQVNRRKGYQKPP*SLSLQR
Trigger: CCTCTGCAAGCTCAGAGAGCAGGGAGGCTTCTGGTA...GCCCTTCCTTCTGTTTACCTGGCTTGGCCTACAGGGGGCACCCCTGGTCTTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR GCA 90 bp GGAACCATGATGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCGCAGGAACCCCGTACACTCCAGCTaGCCGAACACGTCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: GTMMFKASVPPRFSVRRNPVHSS*PNTSSG
Trigger: CCCGGAAGACGTGTTCGGGCAGCTGGAGTGTACGGG...GTTCCTGCGAACGCTGAATCTAGGTGGGACGCTTGCCTTGAACATCATGGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496961.5
ENST00000533024.5
CDS-3UTR CCA 90 bp CTGGCTGTGATGAGGAAAGAGGAGATGCAGTCCCTGGATCAAAATCACCGCAGGGAGCTGCACAGAGGATaGCTAGGGTCTGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: LAVMRKEEMQSLDQNHRRELHRG*LGSALP
Trigger: GGGCAGGGCAGACCCTAGCCATCCTCTGTGCAGCTC...CCTGCGGTGATTTTGATCCAGGGACTGCATCTCCTCTTTCCTCATCACAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp GCCTGGAACCATACTGAGTACATGCCCAGAAGCACCGTTACTGTAGCCATCAGGGAGCTGCACAGAGGATaGCTAGGGTCTGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: AWNHTEYMPRSTVTVAIRELHRG*LGSALP
Trigger: GGGCAGGGCAGACCCTAGCCATCCTCTGTGCAGCTC...CCTGATGGCTACAGTAACGGTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR CCA 90 bp GCACCTTTGATCTGGGCCTGGAACCATACTGAGTACATGCCCAGAAGCACCGTTGAGCTGCACAGAGGATaGCTAGGGTCTGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: APLIWAWNHTEYMPRSTVELHRG*LGSALP
Trigger: GGGCAGGGCAGACCCTAGCCATCCTCTGTGCAGCTC...AACGGTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR CCA 90 bp GGGCATAATGAGTTACGTGGAGAGGACACTTCTGCCCTTGCTGTCCCCATTCTGGTGCCTGGACAGCAGTaGCCAGCAGTGTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: GHNELRGEDTSALAVPILVPGQQ*PAVSGL
Trigger: GAGCCCTGACACTGCTGGCCACTGCTGTCCAGGCAC...CAGAATGGGGACAGCAAGGGCAGAAGTGTCCTCTCCACGTAACTCATTATGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp GGAACCATGATGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCGCAGGAACCCACCCTTGAGACCCTaGCTGCCCGGGGACAAAGGA +
Preference number: 4 (lower is better)
Translates to: GTMMFKASVPPRFSVRRNPPLRP*LPGDKG
Trigger: TCCTTTGTCCCCGGGCAGCCAGGGTCTCAAGGGTGG...GTTCCTGCGAACGCTGAATCTAGGTGGGACGCTTGCCTTGAACATCATGGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR CCA 90 bp CATGCCCAGAAGCACCGTTACTGTAGCCATCAGGTAGACCACCAGTCCACATGTCCACCCTTGAGACCCTaGCTGCCCGGGGACAAAGGA +
Preference number: 4 (lower is better)
Translates to: HAQKHRYCSHQVDHQSTCPPLRP*LPGDKG
Trigger: TCCTTTGTCCCCGGGCAGCCAGGGTCTCAAGGGTGG...ACATGTGGACTGGTGGTCTACCTGATGGCTACAGTAACGGTGCTTCTGGGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR CCA 90 bp AATAGACATCAGATGGCACAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCGCCGCACCTTTGATCTaGGCCTGGAACCATACTGAG +
Preference number: 4 (lower is better)
Translates to: NRHQMAQPTQTAGCQHACAAPLI*AWNHTE
Trigger: CTCAGTATGGTTCCAGGCCCAGATCAAAGGTGCGGC...GCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTGTGCCATCTGATGTCTATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp AGACAGGAACAATACCCCTCTGCACAGCAGGGGCCTCCTTTAGATGCTTGTCCTGAGCGGGGTGGTCTCTaGAGGGAAGAGAGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: RQEQYPSAQQGPPLDACPERGGL*REESPA
Trigger: GGCTGGACTCTCTTCCCTCCAGAGACCACCCCGCTC...AGGACAAGCATCTAAAGGAGGCCCCTGCTGTGCAGAGGGGTATTGTTCCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp AGACAGGAACAATACCCCTCTGCACAGCAGGGGCCTCCTTTAGATGCTTGTCCTCAGAAAGGCGACAGCTaGGGCCCCTTCCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: RQEQYPSAQQGPPLDACPQKGDS*GPFLLQ
Trigger: CTGCAGGAGGAAGGGGCCCCAGCTGTCGCCTTTCTG...AGGACAAGCATCTAAAGGAGGCCCCTGCTGTGCAGAGGGGTATTGTTCCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp GCACCTTTGATCTGGGCCTGGAACCATACTGAGTACATGCCCAGAAGCACCGTTGCCCTCCAGGCCTGCTaGTCAGAAAGGCGACAGCTG +
Preference number: 4 (lower is better)
Translates to: APLIWAWNHTEYMPRSTVALQAC*SERRQL
Trigger: CAGCTGTCGCCTTTCTGACCAGCAGGCCTGGAGGGC...AACGGTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp TGTGCCCTGGCACAGGGACCAAATCAGCACAAATTTCTGAAGGGCCTCAAGGGCAGGAGCCCATGCAGCTaGGAGCCACTGAGATCCCAG +
Preference number: 4 (lower is better)
Translates to: CALAQGPNQHKFLKGLKGRSPCS*EPLRSQ
Trigger: CTGGGATCTCAGTGGCTCCCAGCTGCATGGGCTCCT...GCCCTTGAGGCCCTTCAGAAATTTGTGCTGATTTGGTCCCTGTGCCAGGGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp CTGCCCCTGCTCCTGGGAACTGGAGCTCCAGCGCCTACATCCCAGGCTTCCCAGAAAATTAGCTGGATATaGTGGCACGTGCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: LPLLLGTGAPAPTSQASQKISWI*WHVPVV
Trigger: GACTACAGGCACGTGCCACCATATCCAGCTAATTTT...CTGGGAAGCCTGGGATGTAGGCGCTGGAGCTCCAGTTCCCAGGAGCAGGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR CCA 90 bp TTCAGCTGCAGCAAGGAGCGGGGTGGTCTCTGGAGGGAAGAGAGTCCAGCCCTCTTTCAAAACAAGACCTaGCTAGGCACGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: FSCSKERGGLWREESPALFQNKT*LGTVAH
Trigger: GTGAGCCACCGTGCCTAGCCAGGTCTTGTTTTGAAA...GAGGGCTGGACTCTCTTCCCTCCAGAGACCACCCCGCTCCTTGCTGCAGCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR CCA 90 bp CCCAGACATGAGCAGAATAAGGGAGGTGCGGGGAACAGAGGATGGCGGAGGAGGAGTCACTGCAAGGCGTaGCTAGCAGCAAGATTCCTG +
Preference number: 4 (lower is better)
Translates to: PRHEQNKGGAGNRGWRRRSHCKA*LAARFL
Trigger: CAGGAATCTTGCTGCTAGCCACGCCTTGCAGTGACT...CCTCCTCCGCCATCCTCTGTTCCCCGCACCTCCCTTATTCTGCTCATGTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR TCA 90 bp CTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATTGCCAGGACACCAGATaGGGCAGCTCACTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: LQDQALHHLPLIPSTSPHCQDTR*GSSLRV
Trigger: GACCCGCAGTGAGCTGCCTCATCTGGTGTCCTGGCA...ATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000533024.5
CDS-3UTR TCA 90 bp AAGAACTACCCCCTGAGTCTGCTAAGTGGTCCACGTGGTCCACAGCTGGGAGAGTCAGATGGTAGAGCTTaGGGCGAGCCACCCTTGAGA +
Preference number: 4 (lower is better)
Translates to: KNYPLSLLSGPRGPQLGESDGRA*GEPPLR
Trigger: TCTCAAGGGTGGCTCGCCTCAAGCTCTACCATCTGA...CTCTCCCAGCTGTGGACCACGTGGACCACTTAGCAGACTCAGGGGGTAGTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp GGGGAGGGAAGTCCCTCCACAATCCGGCCTGCCAGGATGAAGGGCTCCTCCTGGCTGTCCCCATACTATTaGATCAAACCAACCTCCTTA +
Preference number: 4 (lower is better)
Translates to: GEGSPSTIRPARMKGSSWLSPYY*IKPTSL
Trigger: TAAGGAGGTTGGTTTGATTCAATAGTATGGGGACAG...CCAGGAGGAGCCCTTCATCCTGGCAGGCCGGATTGTGGAGGGACTTCCCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp GCCGCACCTTTGATCTGGGCCTGGAACCATACTGAGTACATGCCCAGAAGCACCAAGGTGAGGGCTGACTaGCTCAGCCTGCAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: AAPLIWAWNHTEYMPRSTKVRAD*LSLQVL
Trigger: AAGCACTTGCAGGCTGAGTCAGTCAGCCCTCACCTT...GGTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGGTGCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310611.8
ENST00000430195.2
CDS-3UTR TCA 90 bp GGAACCATGATGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCGCAGGAACGGGGAAGGTGAGGGCTaGCTGACTCAGCCTGCAAGT +
Preference number: 4 (lower is better)
Translates to: GTMMFKASVPPRFSVRRNGEGEG*LTQPAS
Trigger: ACTTGCAGGCTGAGTCAGTCAGCCCTCACCTTCCCC...GTTCCTGCGAACGCTGAATCTAGGTGGGACGCTTGCCTTGAACATCATGGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR GCA 90 bp CATTTCCATTTTCTTCCTCGGCAAGTAGGATCTGGAAATCTGGTGCATGATCACCCTACCTCCAGGGGCTaGATGGCCGTGGCCCGCGGG +
Preference number: 4 (lower is better)
Translates to: HFHFLPRQVGSGNLVHDHPTSRG*MAVARG
Trigger: CCCGCGGGCCACGGCCATGCAGCCCCTGGAGGTAGG...GTGATCATGCACCAGATTTCCAGATCCTACTTGCCGAGGAAGAAAATGGAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
CDS-3UTR GCA 90 bp TACCAGGCCGCACCTTTGATCTGGGCCTGGAACCATACTGAGTACATGCCCAGAGGATGGCTTCAGCCATaGAGAGGCAGAACGCCAAGG +
Preference number: 4 (lower is better)
Translates to: YQAAPLIWAWNHTEYMPRGWLQP*RGRTPR
Trigger: CCTTGGCGTTCTGCCTCTGCATGGCTGAAGCCATCC...TCTGGGCATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGGTGCGGCCTGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310611.8
ENST00000533024.5
CDS-3UTR GCA 90 bp GCCAACCAGACACAGGAGCATCAAGAGCACTACCAGAAGCCTCCCTGCTCTCTGGTGGAGCCGGATCCGTaGTTTTCGGGAGCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: ANQTQEHQEHYQKPPCSLVEPDP*FSGAEE
Trigger: TTCTTCTGCTCCCGAAAAGCACGGATCCGGCTCCAC...CAGAGAGCAGGGAGGCTTCTGGTAGTGCTCTTGATGCTCCTGTGTCTGGTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR GCA 90 bp GCCGCACCTTTGATCTGGGCCTGGAACCATACTGAGTACATGCCCAGAAGCACCGTGGAGCCGGATCCGTaGTTTTCGGGAGCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: AAPLIWAWNHTEYMPRSTVEPDP*FSGAEE
Trigger: TTCTTCTGCTCCCGAAAAGCACGGATCCGGCTCCAC...GGTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGGTGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR GCA 90 bp TCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATTTAGGATGGCTAGGGTCTaGCCTGCCCAGTGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: SGSGSPSPSTHTQYISPFRMARV*PAQWSR
Trigger: CCGGCTCCACTGGGCAGGGCAGACCCTAGCCATCCT...AAATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000533024.5
CDS-3UTR GCA 90 bp CTGGCTGTGATGAGGAAAGAGGAGATGCAGTCCCTGGATCAAAATCACCGCAGGTGGATAGACGGGCAGTaGCAGGCACAGGTACCAGGC +
Preference number: 4 (lower is better)
Translates to: LAVMRKEEMQSLDQNHRRWIDGQ*QAQVPG
Trigger: GCCTGGTACCTGTGCCTGGCACTGCCCGTCTATCCA...CCTGCGGTGATTTTGATCCAGGGACTGCATCTCCTCTTTCCTCATCACAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp ATCAAGACCAGGGGTGCCCCCTGTAGGCCAAGCCAGGTAAACAGAAGGAAGGGCTGGAGAGGACACTTCTaGCCTTGCTGTCCCCATTCT +
Preference number: 4 (lower is better)
Translates to: IKTRGAPCRPSQVNRRKGWRGHF*PCCPHS
Trigger: AGAATGGGGACAGCAAGGGCAGAAGTGTCCTCTCCA...GCCCTTCCTTCTGTTTACCTGGCTTGGCCTACAGGGGGCACCCCTGGTCTTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR GCA 90 bp CCCAGACATGAGCAGAATAAGGGAGGTGCGGGGAACAGAGGATGGCGGAGGAGGGGGGCCTCCTTTAGATaGTTGTCCTGGAGATGCAAT +
Preference number: 4 (lower is better)
Translates to: PRHEQNKGGAGNRGWRRRGASFR*LSWRCN
Trigger: ATTGCATCTCCAGGACAAGCATCTAAAGGAGGCCCC...CCTCCTCCGCCATCCTCTGTTCCCCGCACCTCCCTTATTCTGCTCATGTCTGGG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp CCTGCTCCTGGGAACTGGAGCTCCAGCGCCTACATCCCAGGCTTCCCAGAGTTCCTTTACGGCATTGCCTaGTTGCTCTTAGAGCAAGCT +
Preference number: 4 (lower is better)
Translates to: PAPGNWSSSAYIPGFPEFLYGIA*LLLEQA
Trigger: AGCTTGCTCTAAGAGCAAGCAGGCAATGCCGTAAAG...GAACTCTGGGAAGCCTGGGATGTAGGCGCTGGAGCTCCAGTTCCCAGGAGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp CTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATACAGCCCACGCAAACTaGCGGCTGTCAGCACGCCTG +
Preference number: 4 (lower is better)
Translates to: LQDQALHHLPLIPSTSPHTAHAN*RLSARL
Trigger: CAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTGT...ATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp GCCTGGAACCATACTGAGTACATGCCCAGAAGCACCGTTACTGTAGCCATCAGGGCAGGAGACCACCAGTaGCCTCCTCTCTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: AWNHTEYMPRSTVTVAIRAGDHQ*PPLCSV
Trigger: CACAGAGCAGAGAGGAGGGCACTGGTGGTCTCCTGC...CCTGATGGCTACAGTAACGGTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp AGGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCTGCGGAAGGGCAGCCTaGCTTGTGAAAGGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: RLQDQALHHLPLIPSTSPCGRAA*LVKGWG
Trigger: TCCCCACCCTTTCACAAGGCAGGCTGCCCTTCCGCA...GGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR GCA 90 bp ACCAAATCAGCACAAATTTCTGAAGGGCCTCAAGGGCAGAGCTGTCCCTCCAGGTGCGGAAGGGCAGCCTaGCTTGTGAAAGGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: TKSAQISEGPQGQSCPSRCGRAA*LVKGWG
Trigger: TCCCCACCCTTTCACAAGGCAGGCTGCCCTTCCGCA...CCTGGAGGGACAGCTCTGCCCTTGAGGCCCTTCAGAAATTTGTGCTGATTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR GCA 90 bp CACAGGTACCAGGCCGCACCTTTGATCTGGGCCTGGAACCATACTGAGTACATGCTCAACAGCCACCCCTaGCACCACCATAGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: HRYQAAPLIWAWNHTEYMLNSHP*HHHRSQ
Trigger: CTGAGACCTATGGTGGTGGCAGGGGTGGCTGTTGAG...CATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGGTGCGGCCTGGTACCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310611.8
ENST00000430195.2
CDS-3UTR GCA 90 bp CTCCACAATCCGGCCTGCCAGGATGAAGGGCTCCTCCTGGTGACCTATTCCCTAGGATGGCTTCAGCCATaGAGAGGCAGAACTGTGAAC +
Preference number: 4 (lower is better)
Translates to: LHNPACQDEGLLLVTYSLGWLQP*RGRTVN
Trigger: GTTCACAGTTCTGCCTCTGCATGGCTGAAGCCATCC...TAGGGAATAGGTCACCAGGAGGAGCCCTTCATCCTGGCAGGCCGGATTGTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp CATTTCCATTTTCTTCCTCGGCAAGTAGGATCTGGAAATCTGGTGCATGATCACGGGGCTGCATGGCCGTaGCCCGCGGGCCCGTACACT +
Preference number: 4 (lower is better)
Translates to: HFHFLPRQVGSGNLVHDHGAAWP*PAGPYT
Trigger: AGTGTACGGGCCCGCGGGCCACGGCCATGCAGCCCC...GTGATCATGCACCAGATTTCCAGATCCTACTTGCCGAGGAAGAAAATGGAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR CCA 90 bp CTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATTCTCGGCTCCCCAGCTaGAGCGGGAACCAGACCTAC +
Preference number: 4 (lower is better)
Translates to: LQDQALHHLPLIPSTSPHSRLPS*SGNQTY
Trigger: GTAGGTCTGGTTCCCGCTCCAGCTGGGGAGCCGAGA...ATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp CACCGTTACTGTAGCCATCAGGTAGACCACCAGTCCACATGTCAGATGGTAGAGTCTCGGCTCCCCAGCTaGAGCGGGAACCAGACCTAC +
Preference number: 4 (lower is better)
Translates to: HRYCSHQVDHQSTCQMVESRLPS*SGNQTY
Trigger: GTAGGTCTGGTTCCCGCTCCAGCTGGGGAGCCGAGA...CTCTACCATCTGACATGTGGACTGGTGGTCTACCTGATGGCTACAGTAACGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
CDS-3UTR CCA 90 bp TCCAGAAGACCCTCACCTGAGTCCCTTCTTTCCACAGTGCCTGACCCCCTGTGCGTGAGAAGAGTAGGATaGCTTCAGCCATGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: SRRPSPESLLSTVPDPLCVRRVG*LQPCRG
Trigger: GCCTCTGCATGGCTGAAGCCATCCTACTCTTCTCAC...GCACAGGGGGTCAGGCACTGTGGAAAGAAGGGACTCAGGTGAGGGTCTTCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp CATGCCCAGAAGCACCGTTACTGTAGCCATCAGGTAGACCACCAGTCCACATGTGTCTGCCCTGCCCAGTaGAGCCGGATCCGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: HAQKHRYCSHQVDHQSTCVCPAQ*SRIRAF
Trigger: AAAAGCACGGATCCGGCTCCACTGGGCAGGGCAGAC...ACATGTGGACTGGTGGTCTACCTGATGGCTACAGTAACGGTGCTTCTGGGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR CCA 90 bp CAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATTTTGACCCAGAGCTGCACAGAGGATaGCTAGGGTCTGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: QALHHLPLIPSTSPHFDPELHRG*LGSALP
Trigger: GGGCAGGGCAGACCCTAGCCATCCTCTGTGCAGCTC...TGGGTCAAAATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000533024.5
CDS-3UTR CCA 90 bp TGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCGCAGGAACTCACATTTCCGAGCTGCACAGAGGATaGCTAGGGTCTGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: CSRQASHLDSAFAGTHISELHRG*LGSALP
Trigger: GGGCAGGGCAGACCCTAGCCATCCTCTGTGCAGCTC...GGAAATGTGAGTTCCTGCGAACGCTGAATCTAGGTGGGACGCTTGCCTTGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR CCA 90 bp TTTGGTTTCTGCAGTCCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCGTGCCTGGACAGCAGTaGCCAGCAGTGTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: FGFCSPWTSQEVRKPDHFVPGQQ*PAVSGL
Trigger: GAGCCCTGACACTGCTGGCCACTGCTGTCCAGGCAC...GAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGGACTGCAGAAACCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR CCA 90 bp GGTTTCTGCAGTCCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTAGTGCCTGGACAGCAGTaGCCAGCAGTGTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: GFCSPWTSQEVRKPDHFLVPGQQ*PAVSGL
Trigger: GAGCCCTGACACTGCTGGCCACTGCTGTCCAGGCAC...TAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGGACTGCAGAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR CCA 90 bp TTGGTTTCTGCAGTCCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTGTGCCTGGACAGCAGTaGCCAGCAGTGTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: LVSAVPGPAKKCENLTTSVPGQQ*PAVSGL
Trigger: GAGCCCTGACACTGCTGGCCACTGCTGTCCAGGCAC...AGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGGACTGCAGAAACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR CCA 90 bp GCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCAAGCCCACACAGTGCCTaGACAGCAGTGGCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: ASGSGSPSPSTHTQYISPSPHSA*TAVASS
Trigger: ACTGCTGGCCACTGCTGTCCAGGCACTGTGTGGGCT...TGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000533024.5
CDS-3UTR CCA 90 bp GGAACCATGATGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCGCAGGAACAGCCCACACAGTGCCTaGACAGCAGTGGCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: GTMMFKASVPPRFSVRRNSPHSA*TAVASS
Trigger: ACTGCTGGCCACTGCTGTCCAGGCACTGTGTGGGCT...GTTCCTGCGAACGCTGAATCTAGGTGGGACGCTTGCCTTGAACATCATGGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR CCA 90 bp CTCTCTTCTGTTTTGGCCTGTGCCAAGCCCAAGGAAGTCCATGGCTGCATCTCTAGCCCACACAGTGCCTaGACAGCAGTGGCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: LSSVLACAKPKEVHGCISSPHSA*TAVASS
Trigger: ACTGCTGGCCACTGCTGTCCAGGCACTGTGTGGGCT...AGAGATGCAGCCATGGACTTCCTTGGGCTTGGCACAGGCCAAAACAGAAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR CCA 90 bp TCTAAGCTACCCGGAGAGGAGGACCTGAATCTTCAGAAGACCAAGGACATCCACCCACCCTTGAGACCCTaGCTGCCCGGGGACAAAGGA +
Preference number: 4 (lower is better)
Translates to: SKLPGEEDLNLQKTKDIHPPLRP*LPGDKG
Trigger: TCCTTTGTCCCCGGGCAGCCAGGGTCTCAAGGGTGG...GTGGATGTCCTTGGTCTTCTGAAGATTCAGGTCCTCCTCTCCGGGTAGCTTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp GCCGCACCTTTGATCTGGGCCTGGAACCATACTGAGTACATGCCCAGAAGCACCGCCGCACCTTTGATCTaGGCCTGGAACCATACTGAG +
Preference number: 4 (lower is better)
Translates to: AAPLIWAWNHTEYMPRSTAAPLI*AWNHTE
Trigger: CTCAGTATGGTTCCAGGCCCAGATCAAAGGTGCGGC...GGTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGGTGCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR CCA 90 bp TCCCCCAGGAGGGGCATAATGAGTTACGTGGAGAGGACACTTCTGCCCTTGCTGAAGGAAGATCTTAGCTaGGCTAGGCAGCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: SPRRGIMSYVERTLLPLLKEDLS*ARQPSQ
Trigger: CTGGCTGGGCTGCCTAGCCCAGCTAAGATCTTCCTT...CAGCAAGGGCAGAAGTGTCCTCTCCACGTAACTCATTATGCCCCTCCTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp AGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATTTTGACCCACGAGCGGGGTGGTCTCTaGAGGGAAGAGAGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: RLSITFHSYPVHLPILTHERGGL*REESPA
Trigger: GGCTGGACTCTCTTCCCTCCAGAGACCACCCCGCTC...GTGGGTCAAAATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp GAACAATACCCCTCTGCACAGCAGGGGCCTCCTTTAGATGCTTGTCCTGGAGATCAGCAAGGAGCGGGGTaGTCTCTGGAGGGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: EQYPSAQQGPPLDACPGDQQGAG*SLEGRE
Trigger: CTCTCTTCCCTCCAGAGACCACCCCGCTCCTTGCTG...ATCTCCAGGACAAGCATCTAAAGGAGGCCCCTGCTGTGCAGAGGGGTATTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp GGGCATAATGAGTTACGTGGAGAGGACACTTCTGCCCTTGCTGTCCCCATTCTGCAGCAAGGAGCGGGGTaGTCTCTGGAGGGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: GHNELRGEDTSALAVPILQQGAG*SLEGRE
Trigger: CTCTCTTCCCTCCAGAGACCACCCCGCTCCTTGCTG...CAGAATGGGGACAGCAAGGGCAGAAGTGTCCTCTCCACGTAACTCATTATGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp AAGAACTACCCCCTGAGTCTGCTAAGTGGTCCACGTGGTCCACAGCTGGGAGAGTCAGCAGCACTTTCCTaGCTCAGCTGTTGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: KNYPLSLLSGPRGPQLGESAALS*LSCCQA
Trigger: GGCCTGACAACAGCTGAGCCAGGAAAGTGCTGCTGA...CTCTCCCAGCTGTGGACCACGTGGACCACTTAGCAGACTCAGGGGGTAGTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp CAGCACCTCAGGCAGGCTCAGGCTTTACGGCATTGCCTGCTTGCTCTTAGAGCATCAGCAGCACTTTCCTaGCTCAGCTGTTGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: QHLRQAQALRHCLLALRASAALS*LSCCQA
Trigger: GGCCTGACAACAGCTGAGCCAGGAAAGTGCTGCTGA...TGCTCTAAGAGCAAGCAGGCAATGCCGTAAAGCCTGAGCCTGCCTGAGGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp GCACCTTTGATCTGGGCCTGGAACCATACTGAGTACATGCCCAGAAGCACCGTTCCTGCTCCTGGGAACTaGAGCTCCAGCGCCTACATC +
Preference number: 4 (lower is better)
Translates to: APLIWAWNHTEYMPRSTVPAPGN*SSSAYI
Trigger: GATGTAGGCGCTGGAGCTCCAGTTCCCAGGAGCAGG...AACGGTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp CTTACTTCTAAGCTACCCGGAGAGGAGGACCTGAATCTTCAGAAGACCAAGGACACCTGCCCCTGCTCCTaGGAACTGGAGCTCCAGCGC +
Preference number: 4 (lower is better)
Translates to: LTSKLPGEEDLNLQKTKDTCPCS*ELELQR
Trigger: GCGCTGGAGCTCCAGTTCCCAGGAGCAGGGGCAGGT...GTCCTTGGTCTTCTGAAGATTCAGGTCCTCCTCTCCGGGTAGCTTAGAAGTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp TTGGTTTCTGCAGTCCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTCAGAAAGGCGACAGCTaGGGCCCCTTCCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LVSAVPGPAKKCENLTTSQKGDS*GPFLLQ
Trigger: CTGCAGGAGGAAGGGGCCCCAGCTGTCGCCTTTCTG...AGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGGACTGCAGAAACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp AGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATTTTGACCCACGCCCTCCAGGCCTGCTaGTCAGAAAGGCGACAGCTG +
Preference number: 4 (lower is better)
Translates to: RLSITFHSYPVHLPILTHALQAC*SERRQL
Trigger: CAGCTGTCGCCTTTCTGACCAGCAGGCCTGGAGGGC...GTGGGTCAAAATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp GGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCGGCTCAGAGGAGGGGTaGTTACAGAAAAGACGGGGG +
Preference number: 4 (lower is better)
Translates to: GFRIRLSITFHSYPVHLPGSEEG*LQKRRG
Trigger: CCCCCGTCTTTTCTGTAACCACCCCTCCTCTGAGCC...GGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR CCA 90 bp GAGGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCGCCAGGAGAAAAGACTaGTTCCTGGCCGGGACAGCG +
Preference number: 4 (lower is better)
Translates to: EASGSGSPSPSTHTQYISARRKD*FLAGTA
Trigger: CGCTGTCCCGGCCAGGAACCAGTCTTTTCTCCTGGC...GGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420578.7
ENST00000496961.5
CDS-3UTR CCA 90 bp GTGACGAGGGGTGGAGCTACTGCACAACCAGCCACATCAGACAAGTCAACCTTGCAAGGTGACGAGGGGTaGAGCTACTGCACAACCAGC +
Preference number: 4 (lower is better)
Translates to: VTRGGATAQPATSDKSTLQGDEG*SYCTTS
Trigger: GCTGGTTGTGCAGTAGCTCCACCCCTCGTCACCTTG...CAAGGTTGACTTGTCTGATGTGGCTGGTTGTGCAGTAGCTCCACCCCTCGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR CCA 90 bp GCCTGGAACCATACTGAGTACATGCCCAGAAGCACCGTTACTGTAGCCATCAGGCATGCAGAGGCAGAATaGTTCCTGGCCGGGACAGCG +
Preference number: 4 (lower is better)
Translates to: AWNHTEYMPRSTVTVAIRHAEAE*FLAGTA
Trigger: CGCTGTCCCGGCCAGGAACCATTCTGCCTCTGCATG...CCTGATGGCTACAGTAACGGTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527072.5
3UTR CAA 72 bp ACCTCAGGCAGGCTCAGGCTTTACGGCATTGCCTGCTaGCTCTTAGAGCAAGCTGGTGAACTTTGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: TSGRLRLYGIAC*LLEQAGELCLA
Trigger: GGCCAGGCAAAGTTCACCAGCTTGCTCTAAGAGCAAGCAGGCAATGCCGTAAAGCCTGAGCCTGCCTGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp TCTCATCAAGTAGAGGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCTGCCAGGACACCAGATaGGGCAGCTCACTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: SHQVEASGSGSPSPSTHTCQDTR*GSSLRV
Trigger: GACCCGCAGTGAGCTGCCTCATCTGGTGTCCTGGCA...GGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCCTCTACTTGATGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000533024.5
CDS-3UTR TCA 90 bp GCCCAGAAGCACCGTTACTGTAGCCATCAGGTAGACCACCAGTCCACATGTCAGGGCCTGGAACCATACTaGGTACATGCCCAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: AQKHRYCSHQVDHQSTCQGLEPY*VHAQKH
Trigger: GTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGCC...CTGACATGTGGACTGGTGGTCTACCTGATGGCTACAGTAACGGTGCTTCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR TCA 90 bp GCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCAACCAGGCCGCACCTTTaGTCTGGGCCTGGAACCATA +
Preference number: 4 (lower is better)
Translates to: ASGSGSPSPSTHTQYISPTRPHL*SGPGTI
Trigger: TATGGTTCCAGGCCCAGATCAAAGGTGCGGCCTGGT...TGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000533024.5
CDS-3UTR TCA 90 bp CATGCCCAGAAGCACCGTTACTGTAGCCATCAGGTAGACCACCAGTCCACATGTACCAGGCCGCACCTTTaGTCTGGGCCTGGAACCATA +
Preference number: 4 (lower is better)
Translates to: HAQKHRYCSHQVDHQSTCTRPHL*SGPGTI
Trigger: TATGGTTCCAGGCCCAGATCAAAGGTGCGGCCTGGT...ACATGTGGACTGGTGGTCTACCTGATGGCTACAGTAACGGTGCTTCTGGGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR TCA 90 bp ATCAAGACCAGGGGTGCCCCCTGTAGGCCAAGCCAGGTAAACAGAAGGAAGGGCATCAGCACAAATTTCTaGAGGGCCTCAAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: IKTRGAPCRPSQVNRRKGISTNF*RASRAE
Trigger: CTCTGCCCTTGAGGCCCTTCAGAAATTTGTGCTGAT...GCCCTTCCTTCTGTTTACCTGGCTTGGCCTACAGGGGGCACCCCTGGTCTTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR TCA 90 bp AGACAGGAACAATACCCCTCTGCACAGCAGGGGCCTCCTTTAGATGCTTGTCCTCTCAAGCCCGGATCCTaGGGTGGGCTGAAGGAAGAT +
Preference number: 4 (lower is better)
Translates to: RQEQYPSAQQGPPLDACPLKPGS*GGLKED
Trigger: ATCTTCCTTCAGCCCACCTCAGGATCCGGGCTTGAG...AGGACAAGCATCTAAAGGAGGCCCCTGCTGTGCAGAGGGGTATTGTTCCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp ACCATGATGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCGCAGGAACTCAGGGGCTCCTTTGCCCTaGGAAGTGATTTCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: TMMFKASVPPRFSVRRNSGAPLP*EVISGE
Trigger: CTCCCCCGAAATCACTTCTCAGGGCAAAGGAGCCCC...TGAGTTCCTGCGAACGCTGAATCTAGGTGGGACGCTTGCCTTGAACATCATGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp GCCCCCTGTAGGCCAAGCCAGGTAAACAGAAGGAAGGGCAGGAGTACTGGAAGTGCTAAGGCAAGAACCTaGGCCCTAAGAAGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: APCRPSQVNRRKGRSTGSAKART*ALRRAK
Trigger: CTTTGCCCTTCTTAGGGCTCAGGTTCTTGCCTTAGC...ACTTCCAGTACTCCTGCCCTTCCTTCTGTTTACCTGGCTTGGCCTACAGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR TCA 90 bp CTCTCATCAAGTAGAGGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACTGCTGCCCCAGGATGTaGGGGCAGGTGGTGATGGAG +
Preference number: 4 (lower is better)
Translates to: LSSSRGFRIRLSITFHSYCCPRM*GQVVME
Trigger: CTCCATCACCACCTGCCCTCACATCCTGGGGCAGCA...GTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCCTCTACTTGATGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp CAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATTTTTGCTGCCCCAGGATGTaGGGGCAGGTGGTGATGGAG +
Preference number: 4 (lower is better)
Translates to: QDQALHHLPLIPSTSPHFCCPRM*GQVVME
Trigger: CTCCATCACCACCTGCCCTCACATCCTGGGGCAGCA...AAAATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp ACCAAATCAGCACAAATTTCTGAAGGGCCTCAAGGGCAGAGCTGTCCCTCCAGGAGAGTGCCCTGGCACTaGGGTCTAATGGCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: TKSAQISEGPQGQSCPSRRVPWH*GLMAVQ
Trigger: CTGGACAGCCATTAGACCTCAGTGCCAGGGCACTCT...CCTGGAGGGACAGCTCTGCCCTTGAGGCCCTTCAGAAATTTGTGCTGATTTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp GAACTACTTTCAGCTGCAGCAAGGAGCGGGGTGGTCTCTGGAGGGAAGAGAGTCCTTGGGAGGGGTATCTaGACCCAGAAGGGTAATCTC +
Preference number: 4 (lower is better)
Translates to: ELLSAAARSGVVSGGKRVLGRGI*TQKGNL
Trigger: GAGATTACCCTTCTGGGTTCAGATACCCCTCCCAAG...GACTCTCTTCCCTCCAGAGACCACCCCGCTCCTTGCTGCAGCTGAAAGTAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR TCA 90 bp CTCTCTTCTGTTTTGGCCTGTGCCAAGCCCAAGGAAGTCCATGGCTGCATCTCTGAGGAACAACCAAGGTaGCGAGGGGTGGAGCTACTG +
Preference number: 4 (lower is better)
Translates to: LSSVLACAKPKEVHGCISEEQPR*RGVELL
Trigger: CAGTAGCTCCACCCCTCGTCACCTTGGTTGTTCCTC...AGAGATGCAGCCATGGACTTCCTTGGGCTTGGCACAGGCCAAAACAGAAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR GCA 90 bp TTCTGCAGTCCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTAAATAGGATGGCTAGGGTCTaGCCTGCCCAGTGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: FCSPWTSQEVRKPDHFLNRMARV*PAQWSR
Trigger: CCGGCTCCACTGGGCAGGGCAGACCCTAGCCATCCT...ATTTAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGGACTGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR GCA 90 bp CTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATTGGATAGACGGGCAGTaGCAGGCACAGGTACCAGGC +
Preference number: 4 (lower is better)
Translates to: LQDQALHHLPLIPSTSPHWIDGQ*QAQVPG
Trigger: GCCTGGTACCTGTGCCTGGCACTGCCCGTCTATCCA...ATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000533024.5
CDS-3UTR GCA 90 bp AATAGACATCAGATGGCACAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCGATCTGGAAATCTGGTaGATGATCACCAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: NRHQMAQPTQTAGCQHACDLEIW*MITRAG
Trigger: TCCAGCCCTGGTGATCATGCACCAGATTTCCAGATC...GCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTGTGCCATCTGATGTCTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp TCCCCCAGGAGGGGCATAATGAGTTACGTGGAGAGGACACTTCTGCCCTTGCTGAGCAGCTTTGGTTTCTaGAGTCCCTGGACCAGCCAA +
Preference number: 4 (lower is better)
Translates to: SPRRGIMSYVERTLLPLLSSFGF*SPWTSQ
Trigger: TTGGCTGGTCCAGGGACTGCAGAAACCAAAGCTGCT...CAGCAAGGGCAGAAGTGTCCTCTCCACGTAACTCATTATGCCCCTCCTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp TCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATTTGTGCCTGACCCCCTGTaGCCTGGCACAGGGACCAAA +
Preference number: 4 (lower is better)
Translates to: SGSGSPSPSTHTQYISPFVPDPL*PGTGTK
Trigger: TTTGGTCCCTGTGCCAGGGCACAGGGGGTCAGGCAC...AAATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp GATGCAGTCCCTGGATCAAAATCACCGCAGGTGAAATTCTCCATGCAGCCCCAGGGGCAAAGCATGAGATaGCTGGGGCTCCTTTGCCCT +
Preference number: 4 (lower is better)
Translates to: DAVPGSKSPQVKFSMQPQGQSMR*LGLLCP
Trigger: AGGGCAAAGGAGCCCCAGGCATCTCATGCTTTGCCC...CTGGGGCTGCATGGAGAATTTCACCTGCGGTGATTTTGATCCAGGGACTGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp GCTACCCGGAGAGGAGGACCTGAATCTTCAGAAGACCAAGGACATCCACAACACGGGCAAAGCATGAGATaGCTGGGGCTCCTTTGCCCT +
Preference number: 4 (lower is better)
Translates to: ATRRGGPESSEDQGHPQHGQSMR*LGLLCP
Trigger: AGGGCAAAGGAGCCCCAGGCATCTCATGCTTTGCCC...GTGTTGTGGATGTCCTTGGTCTTCTGAAGATTCAGGTCCTCCTCTCCGGGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp AAGAACTACCCCCTGAGTCTGCTAAGTGGTCCACGTGGTCCACAGCTGGGAGAGAGTCCAGCCCTCATTTaGCAGCTGGCACCAAACTCA +
Preference number: 4 (lower is better)
Translates to: KNYPLSLLSGPRGPQLGESPALI*QLAPNS
Trigger: TGAGTTTGGTGCCAGCTGGCAAATGAGGGCTGGACT...CTCTCCCAGCTGTGGACCACGTGGACCACTTAGCAGACTCAGGGGGTAGTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp CACTCCCAGACGAGAAGTCACTGCAAGGCGTGGCTAGCAGCAAGATTCCTGACTGGAACTACTTTCAGCTaGAGCAAGGAGCGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: HSQTRSHCKAWLAARFLTGTTFS*SKERGG
Trigger: ACCACCCCGCTCCTTGCTGCAGCTGAAAGTAGTTCC...AGTCAGGAATCTTGCTGCTAGCCACGCCTTGCAGTGACTTCTCGTCTGGGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR GCA 90 bp ACCATGATGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCGCAGGAACTCAAGGAACACCTGCCCCTaGTCCTGGGAACTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: TMMFKASVPPRFSVRRNSRNTCP*SWELEL
Trigger: GAGCTCCAGTTCCCAGGAGCAGGGGCAGGTGTTCCT...TGAGTTCCTGCGAACGCTGAATCTAGGTGGGACGCTTGCCTTGAACATCATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp GGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCACATCTAGGAACACCTaGCCCTGCTCCTGGGAACTG +
Preference number: 4 (lower is better)
Translates to: GFRIRLSITFHSYPVHLPTSRNT*PCSWEL
Trigger: CAGTTCCCAGGAGCAGGGGCAGGTGTTCCTAGATGT...GGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp CAGCACCTCAGGCAGGCTCAGGCTTTACGGCATTGCCTGCTTGCTCTTAGAGCATGGAGAGGACACTTCTaGCCTTGCTGTCCCCATTCT +
Preference number: 4 (lower is better)
Translates to: QHLRQAQALRHCLLALRAWRGHF*PCCPHS
Trigger: AGAATGGGGACAGCAAGGGCAGAAGTGTCCTCTCCA...TGCTCTAAGAGCAAGCAGGCAATGCCGTAAAGCCTGAGCCTGCCTGAGGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp GCCCAGAAGCACCGTTACTGTAGCCATCAGGTAGACCACCAGTCCACATGTCAGCTCCTCCAAGGCGTTTaGTTCCTTGCTGAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: AQKHRYCSHQVDHQSTCQLLQGV*FLAEEP
Trigger: TGGCTCCTCAGCAAGGAAGCAAACGCCTTGGAGGAG...CTGACATGTGGACTGGTGGTCTACCTGATGGCTACAGTAACGGTGCTTCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp TTTGGTTTCTGCAGTCCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCCCAAGATTCTGCCACTaGACTCCAGCCTGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: FGFCSPWTSQEVRKPDHFPRFCH*TPAWRQ
Trigger: CTGCCGCCAGGCTGGAGTGCAGTGGCAGAATCTTGG...GAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGGACTGCAGAAACCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR GCA 90 bp CCACTTAAGAGCCAAGAAGGTGAGGCTGGAGGACTTCCCCAGATACAGAGCTGCACTGAGAGGACTCAGTaGCCACTCCCAGACGAGAAG +
Preference number: 4 (lower is better)
Translates to: PLKSQEGEAGGLPQIQSCTERTQ*PLPDEK
Trigger: CTTCTCGTCTGGGAGTGGGCACTGAGTCCTCTCAGT...GCAGCTCTGTATCTGGGGAAGTCCTCCAGCCTCACCTTCTTGGCTCTTAAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR GCA 90 bp GAGCCAAGTGAATACCCCAGACATGAGCAGAATAAGGGAGGTGCGGGGAACAGACTCAACAGCCACCCCTaGCACCACCATAGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: EPSEYPRHEQNKGGAGNRLNSHP*HHHRSQ
Trigger: CTGAGACCTATGGTGGTGGCAGGGGTGGCTGTTGAG...TCTGTTCCCCGCACCTCCCTTATTCTGCTCATGTCTGGGGTATTCACTTGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR GCA 90 bp TCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATTTCCCGTACACTCCAGCTaGCCGAACACGTCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: SGSGSPSPSTHTQYISPFPVHSS*PNTSSG
Trigger: CCCGGAAGACGTGTTCGGGCAGCTGGAGTGTACGGG...AAATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496961.5
ENST00000533024.5
CDS-3UTR CCA 90 bp CTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATTCAGGGGACCTGTTTTaGTTCCTGGCCGGGACAGCG +
Preference number: 4 (lower is better)
Translates to: LQDQALHHLPLIPSTSPHSGDLF*FLAGTA
Trigger: CGCTGTCCCGGCCAGGAACCAAAACAGGTCCCCTGA...ATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000430195.2
CDS-3UTR CCA 90 bp GCCGCACCTTTGATCTGGGCCTGGAACCATACTGAGTACATGCCCAGAAGCACCGTGAGAAGAGTAGGATaGCTTCAGCCATGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: AAPLIWAWNHTEYMPRSTVRRVG*LQPCRG
Trigger: GCCTCTGCATGGCTGAAGCCATCCTACTCTTCTCAC...GGTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGGTGCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR CCA 90 bp GACGAGGGGTGGAGCTACTGCACAACCAGCCACATCAGACAAGTCAACCTTGGCGTGAGAAGAGTAGGATaGCTTCAGCCATGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: DEGWSYCTTSHIRQVNLGVRRVG*LQPCRG
Trigger: GCCTCTGCATGGCTGAAGCCATCCTACTCTTCTCAC...GCCAAGGTTGACTTGTCTGATGTGGCTGGTTGTGCAGTAGCTCCACCCCTCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR CCA 90 bp CTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATGTCTGCCCTGCCCAGTaGAGCCGGATCCGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: LQDQALHHLPLIPSTSPHVCPAQ*SRIRAF
Trigger: AAAAGCACGGATCCGGCTCCACTGGGCAGGGCAGAC...ATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000533024.5
CDS-3UTR CCA 90 bp CACCGTTACTGTAGCCATCAGGTAGACCACCAGTCCACATGTCAGATGGTAGAGGTCTGCCCTGCCCAGTaGAGCCGGATCCGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: HRYCSHQVDHQSTCQMVEVCPAQ*SRIRAF
Trigger: AAAAGCACGGATCCGGCTCCACTGGGCAGGGCAGAC...CTCTACCATCTGACATGTGGACTGGTGGTCTACCTGATGGCTACAGTAACGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR CCA 90 bp TCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCGCAGGAACTCACATTTCCATTGAGCTGCACAGAGGATaGCTAGGGTCTGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: SRQASHLDSAFAGTHISIELHRG*LGSALP
Trigger: GGGCAGGGCAGACCCTAGCCATCCTCTGTGCAGCTC...AATGGAAATGTGAGTTCCTGCGAACGCTGAATCTAGGTGGGACGCTTGCCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR CCA 90 bp TGTCTCTCATCAAGTAGAGGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCAGTGCCTGGACAGCAGTaGCCAGCAGTGTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: CLSSSRGFRIRLSITFHSVPGQQ*PAVSGL
Trigger: GAGCCCTGACACTGCTGGCCACTGCTGTCCAGGCAC...TGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCCTCTACTTGATGAGAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000533024.5
CDS-3UTR CCA 90 bp CTCTCATCAAGTAGAGGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCACCCTTGAGACCCTaGCTGCCCGGGGACAAAGGA +
Preference number: 4 (lower is better)
Translates to: LSSSRGFRIRLSITFHSYPPLRP*LPGDKG
Trigger: TCCTTTGTCCCCGGGCAGCCAGGGTCTCAAGGGTGG...GTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCCTCTACTTGATGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000533024.5
CDS-3UTR CCA 90 bp CTGGCTGTGATGAGGAAAGAGGAGATGCAGTCCCTGGATCAAAATCACCGCAGGCATGATCACCAGGGCTaGATAGACGGGCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: LAVMRKEEMQSLDQNHRRHDHQG*IDGQCQ
Trigger: CTGGCACTGCCCGTCTATCCAGCCCTGGTGATCATG...CCTGCGGTGATTTTGATCCAGGGACTGCATCTCCTCTTTCCTCATCACAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp CTCTCTTCTGTTTTGGCCTGTGCCAAGCCCAAGGAAGTCCATGGCTGCATCTCTCATGATCACCAGGGCTaGATAGACGGGCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: LSSVLACAKPKEVHGCISHDHQG*IDGQCQ
Trigger: CTGGCACTGCCCGTCTATCCAGCCCTGGTGATCATG...AGAGATGCAGCCATGGACTTCCTTGGGCTTGGCACAGGCCAAAACAGAAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR CCA 90 bp AGACAGGAACAATACCCCTCTGCACAGCAGGGGCCTCCTTTAGATGCTTGTCCTGCTAAGTGGTCCACGTaGTCCACAGCTGGGAGAGTG +
Preference number: 4 (lower is better)
Translates to: RQEQYPSAQQGPPLDACPAKWST*STAGRV
Trigger: CACTCTCCCAGCTGTGGACCACGTGGACCACTTAGC...AGGACAAGCATCTAAAGGAGGCCCCTGCTGTGCAGAGGGGTATTGTTCCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp AGTGGTAACAGCCTACCACTTAAGAGCCAAGAAGGTGAGGCTGGAGGACTTCCCGCTAAGTGGTCCACGTaGTCCACAGCTGGGAGAGTG +
Preference number: 4 (lower is better)
Translates to: SGNSLPLKSQEGEAGGLPAKWST*STAGRV
Trigger: CACTCTCCCAGCTGTGGACCACGTGGACCACTTAGC...GGGAAGTCCTCCAGCCTCACCTTCTTGGCTCTTAAGTGGTAGGCTGTTACCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR CCA 90 bp TACCAGGCCGCACCTTTGATCTGGGCCTGGAACCATACTGAGTACATGCCCAGACCTGAGTCTGCTAAGTaGTCCACGTGGTCCACAGCT +
Preference number: 4 (lower is better)
Translates to: YQAAPLIWAWNHTEYMPRPESAK*STWSTA
Trigger: AGCTGTGGACCACGTGGACCACTTAGCAGACTCAGG...TCTGGGCATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGGTGCGGCCTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp CAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATTTTGACCCACCACCGAGGGCAGCCTaGGGAACTACTTTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: QALHHLPLIPSTSPHFDPPPRAA*GTTFSC
Trigger: GCAGCTGAAAGTAGTTCCCCAGGCTGCCCTCGGTGG...TGGGTCAAAATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp CAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATTTTGACCCACCTGCTCCTGGGAACTaGAGCTCCAGCGCCTACATC +
Preference number: 4 (lower is better)
Translates to: QALHHLPLIPSTSPHFDPPAPGN*SSSAYI
Trigger: GATGTAGGCGCTGGAGCTCCAGTTCCCAGGAGCAGG...TGGGTCAAAATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp TTTGGTTTCTGCAGTCCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCCTGGTGAACTTTGCCTaGCCCTCCTACCCTGCGGCA +
Preference number: 4 (lower is better)
Translates to: FGFCSPWTSQEVRKPDHFLVNFA*PSYPAA
Trigger: TGCCGCAGGGTAGGAGGGCCAGGCAAAGTTCACCAG...GAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGGACTGCAGAAACCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp CAAACCAACCTCCTTACTTCTAAGCTACCCGGAGAGGAGGACCTGAATCTTCAGCAGAAAGGCGACAGCTaGGGCCCCTTCCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: QTNLLTSKLPGEEDLNLQQKGDS*GPFLLQ
Trigger: CTGCAGGAGGAAGGGGCCCCAGCTGTCGCCTTTCTG...CTGAAGATTCAGGTCCTCCTCTCCGGGTAGCTTAGAAGTAAGGAGGTTGGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp ATGCCTGAATCTCCCACAGTGAGGTTTTCAAAACAAGACCTGGCTAGGCACGGTGCCCTCCAGGCCTGCTaGTCAGAAAGGCGACAGCTG +
Preference number: 4 (lower is better)
Translates to: MPESPTVRFSKQDLARHGALQAC*SERRQL
Trigger: CAGCTGTCGCCTTTCTGACCAGCAGGCCTGGAGGGC...ACCGTGCCTAGCCAGGTCTTGTTTTGAAAACCTCACTGTGGGAGATTCAGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR CCA 90 bp TCTAAGCTACCCGGAGAGGAGGACCTGAATCTTCAGAAGACCAAGGACATCCACAGGAGCCCATGCAGCTaGGAGCCACTGAGATCCCAG +
Preference number: 4 (lower is better)
Translates to: SKLPGEEDLNLQKTKDIHRSPCS*EPLRSQ
Trigger: CTGGGATCTCAGTGGCTCCCAGCTGCATGGGCTCCT...GTGGATGTCCTTGGTCTTCTGAAGATTCAGGTCCTCCTCTCCGGGTAGCTTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp TGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCGCAGGAACTCACATTTCCGCGGGGAACAGAGGATaGCGGAGGAGGGAACACACA +
Preference number: 4 (lower is better)
Translates to: CSRQASHLDSAFAGTHISAGNRG*RRREHT
Trigger: TGTGTGTTCCCTCCTCCGCCATCCTCTGTTCCCCGC...GGAAATGTGAGTTCCTGCGAACGCTGAATCTAGGTGGGACGCTTGCCTTGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp ACCAAATCAGCACAAATTTCTGAAGGGCCTCAAGGGCAGAGCTGTCCCTCCAGGGGCTCAGAGGAGGGGTaGTTACAGAAAAGACGGGGG +
Preference number: 4 (lower is better)
Translates to: TKSAQISEGPQGQSCPSRGSEEG*LQKRRG
Trigger: CCCCCGTCTTTTCTGTAACCACCCCTCCTCTGAGCC...CCTGGAGGGACAGCTCTGCCCTTGAGGCCCTTCAGAAATTTGTGCTGATTTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR CCA 90 bp GATGCAGTCCCTGGATCAAAATCACCGCAGGTGAAATTCTCCATGCAGCCCCAGAGAGGAGGCCCAGGCTaGCAAGTGGTAACAGCCTAC +
Preference number: 4 (lower is better)
Translates to: DAVPGSKSPQVKFSMQPQRGGPG*QVVTAY
Trigger: GTAGGCTGTTACCACTTGCCAGCCTGGGCCTCCTCT...CTGGGGCTGCATGGAGAATTTCACCTGCGGTGATTTTGATCCAGGGACTGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR CCA 90 bp ATCAAGACCAGGGGTGCCCCCTGTAGGCCAAGCCAGGTAAACAGAAGGAAGGGCTTTCAAAACAAGACCTaGCTAGGCACGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: IKTRGAPCRPSQVNRRKGFQNKT*LGTVAH
Trigger: GTGAGCCACCGTGCCTAGCCAGGTCTTGTTTTGAAA...GCCCTTCCTTCTGTTTACCTGGCTTGGCCTACAGGGGGCACCCCTGGTCTTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR TCA 90 bp GCACCTTTGATCTGGGCCTGGAACCATACTGAGTACATGCCCAGAAGCACCGTTAGAACGCCAAGGCCATaGATACAGGGTGCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: APLIWAWNHTEYMPRSTVRTPRP*IQGARR
Trigger: TCTCCTGGCACCCTGTATTCATGGCCTTGGCGTTCT...AACGGTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310611.8
ENST00000533024.5
CDS-3UTR TCA 90 bp TTCTGCAGTCCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTAAATTGCCAGGACACCAGATaGGGCAGCTCACTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: FCSPWTSQEVRKPDHFLNCQDTR*GSSLRV
Trigger: GACCCGCAGTGAGCTGCCTCATCTGGTGTCCTGGCA...ATTTAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGGACTGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR TCA 90 bp AGACAGGAACAATACCCCTCTGCACAGCAGGGGCCTCCTTTAGATGCTTGTCCTGGCCTGGAACCATACTaGGTACATGCCCAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: RQEQYPSAQQGPPLDACPGLEPY*VHAQKH
Trigger: GTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGCC...AGGACAAGCATCTAAAGGAGGCCCCTGCTGTGCAGAGGGGTATTGTTCCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp GCCTGGAACCATACTGAGTACATGCCCAGAAGCACCGTTACTGTAGCCATCAGGGGCCTGGAACCATACTaGGTACATGCCCAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: AWNHTEYMPRSTVTVAIRGLEPY*VHAQKH
Trigger: GTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGCC...CCTGATGGCTACAGTAACGGTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR TCA 90 bp CAAGTGAATACCCCAGACATGAGCAGAATAAGGGAGGTGCGGGGAACAGAGGATACCAGGCCGCACCTTTaGTCTGGGCCTGGAACCATA +
Preference number: 4 (lower is better)
Translates to: QVNTPDMSRIREVRGTEDTRPHL*SGPGTI
Trigger: TATGGTTCCAGGCCCAGATCAAAGGTGCGGCCTGGT...ATCCTCTGTTCCCCGCACCTCCCTTATTCTGCTCATGTCTGGGGTATTCACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp AGACAGGAACAATACCCCTCTGCACAGCAGGGGCCTCCTTTAGATGCTTGTCCTGCTGGGAGAGTGTTCTaGGACATCGACCTGACAGAC +
Preference number: 4 (lower is better)
Translates to: RQEQYPSAQQGPPLDACPAGRVF*DIDLTD
Trigger: GTCTGTCAGGTCGATGTCTCAGAACACTCTCCCAGC...AGGACAAGCATCTAAAGGAGGCCCCTGCTGTGCAGAGGGGTATTGTTCCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp CCAAGTGAATACCCCAGACATGAGCAGAATAAGGGAGGTGCGGGGAACAGAGGAGATCCTGAGGTGGGCTaGAGGAAGATCTTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PSEYPRHEQNKGGAGNRGDPEVG*RKILAG
Trigger: CCCAGCTAAGATCTTCCTTCAGCCCACCTCAGGATC...TCCTCTGTTCCCCGCACCTCCCTTATTCTGCTCATGTCTGGGGTATTCACTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp CAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATTTTGACCCACTCAAGCCCGGATCCTaGGGTGGGCTGAAGGAAGAT +
Preference number: 4 (lower is better)
Translates to: QALHHLPLIPSTSPHFDPLKPGS*GGLKED
Trigger: ATCTTCCTTCAGCCCACCTCAGGATCCGGGCTTGAG...TGGGTCAAAATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp CCACTTAAGAGCCAAGAAGGTGAGGCTGGAGGACTTCCCCAGATACAGAGCTGCAAGAAGGGCAAAGCATaGGATGCCTGGGGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: PLKSQEGEAGGLPQIQSCKKGKA*DAWGSF
Trigger: AAAGGAGCCCCAGGCATCTCATGCTTTGCCCTTCTT...GCAGCTCTGTATCTGGGGAAGTCCTCCAGCCTCACCTTCTTGGCTCTTAAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR TCA 90 bp GCCAACCAGACACAGGAGCATCAAGAGCACTACCAGAAGCCTCCCTGCTCTCTGTGTCAGGCCTTGCCATaGTCTAGGGAGATCCTATCT +
Preference number: 4 (lower is better)
Translates to: ANQTQEHQEHYQKPPCSLCQALP*SREILS
Trigger: AGATAGGATCTCCCTAGATCATGGCAAGGCCTGACA...CAGAGAGCAGGGAGGCTTCTGGTAGTGCTCTTGATGCTCCTGTGTCTGGTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR TCA 90 bp CCAAGTGAATACCCCAGACATGAGCAGAATAAGGGAGGTGCGGGGAACAGAGGATCCCAGAGTTCCCTGTaGGCTATGTCGACTTGCCTC +
Preference number: 4 (lower is better)
Translates to: PSEYPRHEQNKGGAGNRGSQSSL*AMSTCL
Trigger: GAGGCAAGTCGACATAGCTCACAGGGAACTCTGGGA...TCCTCTGTTCCCCGCACCTCCCTTATTCTGCTCATGTCTGGGGTATTCACTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp CTTAGCTGGGCTAGGCAGCCCAGCCAGCAGCCTTCGGCTTGGTTAAGCCAATGCCTGAATCTCCCACAGTaGGGTTTTCAAAACAAGACC +
Preference number: 4 (lower is better)
Translates to: LSWARQPSQQPSAWLSQCLNLPQ*GFQNKT
Trigger: GGTCTTGTTTTGAAAACCTCACTGTGGGAGATTCAG...GCATTGGCTTAACCAAGCCGAAGGCTGCTGGCTGGGCTGCCTAGCCCAGCTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR TCA 90 bp CCACTTAAGAGCCAAGAAGGTGAGGCTGGAGGACTTCCCCAGATACAGAGCTGCTCCCAGCCCCCAAGCTaGTGCACCTTTCATTTCATG +
Preference number: 4 (lower is better)
Translates to: PLKSQEGEAGGLPQIQSCSQPPS*CTFHFM
Trigger: CATGAAATGAAAGGTGCATCAGCTTGGGGGCTGGGA...GCAGCTCTGTATCTGGGGAAGTCCTCCAGCCTCACCTTCTTGGCTCTTAAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR TCA 90 bp GAACAATACCCCTCTGCACAGCAGGGGCCTCCTTTAGATGCTTGTCCTGGAGATTCTGGCTTGGAGGCCTaGGAAAAAGGAGGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: EQYPSAQQGPPLDACPGDSGLEA*EKGGAL
Trigger: GAGAGCACCTCCTTTTTCTCAGGCCTCCAAGCCAGA...ATCTCCAGGACAAGCATCTAAAGGAGGCCCCTGCTGTGCAGAGGGGTATTGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp AAGTCTGATGAGGACTACTTGGAGTTTGGAGTTCTCTCTTCTGTTTTGGCCTGTGCGCCAAGATCCCACTaGCTCTCCGCAGCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: KSDEDYLEFGVLSSVLACAPRSH*LSAASG
Trigger: CCCGCTGGCTGCGGAGAGGCAGTGGGATCTTGGCGC...ACAGGCCAAAACAGAAGAGAGAACTCCAAACTCCAAGTAGTCCTCATCAGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR GCA 90 bp GCTACCCGGAGAGGAGGACCTGAATCTTCAGAAGACCAAGGACATCCACAACACGTGGAGCCGGATCCGTaGTTTTCGGGAGCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: ATRRGGPESSEDQGHPQHVEPDP*FSGAEE
Trigger: TTCTTCTGCTCCCGAAAAGCACGGATCCGGCTCCAC...GTGTTGTGGATGTCCTTGGTCTTCTGAAGATTCAGGTCCTCCTCTCCGGGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp GGAACCATGATGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCGCAGGAACGTGGAGCCGGATCCGTaGTTTTCGGGAGCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: GTMMFKASVPPRFSVRRNVEPDP*FSGAEE
Trigger: TTCTTCTGCTCCCGAAAAGCACGGATCCGGCTCCAC...GTTCCTGCGAACGCTGAATCTAGGTGGGACGCTTGCCTTGAACATCATGGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR GCA 90 bp GGCCAAGATGTGCAATTTTGTCTGCCATGCCTTGCAGCACTTACCCTGGCTCCTGTGGAGCCGGATCCGTaGTTTTCGGGAGCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: GQDVQFCLPCLAALTLAPVEPDP*FSGAEE
Trigger: TTCTTCTGCTCCCGAAAAGCACGGATCCGGCTCCAC...AGGAGCCAGGGTAAGTGCTGCAAGGCATGGCAGACAAAATTGCACATCTTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR GCA 90 bp CACCACCTCCCCCAAACCACAAGAAGTTCCTTAGATTCTGGCCAAGATGTGCAATGGATAGACGGGCAGTaGCAGGCACAGGTACCAGGC +
Preference number: 4 (lower is better)
Translates to: HHLPQTTRSSLDSGQDVQWIDGQ*QAQVPG
Trigger: GCCTGGTACCTGTGCCTGGCACTGCCCGTCTATCCA...TTGCACATCTTGGCCAGAATCTAAGGAACTTCTTGTGGTTTGGGGGAGGTGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR GCA 90 bp GCCAACCAGACACAGGAGCATCAAGAGCACTACCAGAAGCCTCCCTGCTCTCTGGGACCAGCCAAGAAGTaGGAAAACCTGACCACTTCT +
Preference number: 4 (lower is better)
Translates to: ANQTQEHQEHYQKPPCSLGPAKK*ENLTTS
Trigger: AGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCC...CAGAGAGCAGGGAGGCTTCTGGTAGTGCTCTTGATGCTCCTGTGTCTGGTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR GCA 90 bp GATAGGGACGGAGTAAACCCATACTGCAGGTTTCCCAGCCCCCAAGCTGATGCAAGTCCAGCCCTCATTTaGCAGCTGGCACCAAACTCA +
Preference number: 4 (lower is better)
Translates to: DRDGVNPYCRFPSPQADASPALI*QLAPNS
Trigger: TGAGTTTGGTGCCAGCTGGCAAATGAGGGCTGGACT...TGCATCAGCTTGGGGGCTGGGAAACCTGCAGTATGGGTTTACTCCGTCCCTATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR GCA 90 bp GCCTGGAACCATACTGAGTACATGCCCAGAAGCACCGTTACTGTAGCCATCAGGGGAACTACTTTCAGCTaGAGCAAGGAGCGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: AWNHTEYMPRSTVTVAIRGTTFS*SKERGG
Trigger: ACCACCCCGCTCCTTGCTGCAGCTGAAAGTAGTTCC...CCTGATGGCTACAGTAACGGTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp GAGCCAAGTGAATACCCCAGACATGAGCAGAATAAGGGAGGTGCGGGGAACAGAGGAACTACTTTCAGCTaGAGCAAGGAGCGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: EPSEYPRHEQNKGGAGNRGTTFS*SKERGG
Trigger: ACCACCCCGCTCCTTGCTGCAGCTGAAAGTAGTTCC...TCTGTTCCCCGCACCTCCCTTATTCTGCTCATGTCTGGGGTATTCACTTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp GCCCAGAAGCACCGTTACTGTAGCCATCAGGTAGACCACCAGTCCACATGTCAGGCTGTTGTCAGGCCTTaGCATGATCTAGGGAGATCC +
Preference number: 4 (lower is better)
Translates to: AQKHRYCSHQVDHQSTCQAVVRP*HDLGRS
Trigger: GGATCTCCCTAGATCATGGCAAGGCCTGACAACAGC...CTGACATGTGGACTGGTGGTCTACCTGATGGCTACAGTAACGGTGCTTCTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp AGACAGGAACAATACCCCTCTGCACAGCAGGGGCCTCCTTTAGATGCTTGTCCTACATCTAGGAACACCTaGCCCTGCTCCTGGGAACTG +
Preference number: 4 (lower is better)
Translates to: RQEQYPSAQQGPPLDACPTSRNT*PCSWEL
Trigger: CAGTTCCCAGGAGCAGGGGCAGGTGTTCCTAGATGT...AGGACAAGCATCTAAAGGAGGCCCCTGCTGTGCAGAGGGGTATTGTTCCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp CTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATGGACACTTCTGCCCTTaGTGTCCCCATTCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: LQDQALHHLPLIPSTSPHGHFCP*CPHSVP
Trigger: GGGGACAGAATGGGGACAGCAAGGGCAGAAGTGTCC...ATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp TTGGTTTCTGCAGTCCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTGGACACTTCTGCCCTTaGTGTCCCCATTCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: LVSAVPGPAKKCENLTTSGHFCP*CPHSVP
Trigger: GGGGACAGAATGGGGACAGCAAGGGCAGAAGTGTCC...AGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGGACTGCAGAAACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp TTGGTTTCTGCAGTCCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTGCTTGTCCTGGAGATaGAATCTCCCCCAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: LVSAVPGPAKKCENLTTSCLSWR*NLPQEG
Trigger: CCCCTCCTGGGGGAGATTGCATCTCCAGGACAAGCA...AGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGGACTGCAGAAACCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp TTCTGCAGTCCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTAAATCCTGCCCTCCAGGCCTaGTGGTCAGAAAGGCGACAG +
Preference number: 4 (lower is better)
Translates to: FCSPWTSQEVRKPDHFLNPALQA*WSERRQ
Trigger: CTGTCGCCTTTCTGACCAGCAGGCCTGGAGGGCAGG...ATTTAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGGACTGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp CTCCACAATCCGGCCTGCCAGGATGAAGGGCTCCTCCTGGTGACCTATTCCCTAGCCATGAATACAGGGTaGCAGGAGAAAAGACTGGTT +
Preference number: 4 (lower is better)
Translates to: LHNPACQDEGLLLVTYSLAMNTG*QEKRLV
Trigger: AACCAGTCTTTTCTCCTGGCACCCTGTATTCATGGC...TAGGGAATAGGTCACCAGGAGGAGCCCTTCATCCTGGCAGGCCGGATTGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420578.7
ENST00000496961.5
CDS-3UTR CCA 90 bp CCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTAAATAGATCCCTTTCTCGGCTCCCCAGCTaGAGCGGGAACCAGACCTAC +
Preference number: 4 (lower is better)
Translates to: PWTSQEVRKPDHFLNRSLSRLPS*SGNQTY
Trigger: GTAGGTCTGGTTCCCGCTCCAGCTGGGGAGCCGAGA...AAGGGATCTATTTAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
CDS-3UTR CCA 90 bp CTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATACCTGTTTTGGTTCCTaGCCGGGACAGCGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: LQDQALHHLPLIPSTSPHTCFGS*PGQRCQ
Trigger: CTGACAGCGCTGTCCCGGCCAGGAACCAAAACAGGT...ATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000430195.2
CDS-3UTR CCA 90 bp CAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATTTTAGCCCACACAGTGCCTaGACAGCAGTGGCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: QDQALHHLPLIPSTSPHFSPHSA*TAVASS
Trigger: ACTGCTGGCCACTGCTGTCCAGGCACTGTGTGGGCT...AAAATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000533024.5
CDS-3UTR CCA 90 bp GGAACCATGATGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCGCAGGAACGCCGCACCTTTGATCTaGGCCTGGAACCATACTGAG +
Preference number: 4 (lower is better)
Translates to: GTMMFKASVPPRFSVRRNAAPLI*AWNHTE
Trigger: CTCAGTATGGTTCCAGGCCCAGATCAAAGGTGCGGC...GTTCCTGCGAACGCTGAATCTAGGTGGGACGCTTGCCTTGAACATCATGGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR CCA 90 bp AGTGGTAACAGCCTACCACTTAAGAGCCAAGAAGGTGAGGCTGGAGGACTTCCCGCCGCACCTTTGATCTaGGCCTGGAACCATACTGAG +
Preference number: 4 (lower is better)
Translates to: SGNSLPLKSQEGEAGGLPAAPLI*AWNHTE
Trigger: CTCAGTATGGTTCCAGGCCCAGATCAAAGGTGCGGC...GGGAAGTCCTCCAGCCTCACCTTCTTGGCTCTTAAGTGGTAGGCTGTTACCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR CCA 90 bp CACAGGTACCAGGCCGCACCTTTGATCTGGGCCTGGAACCATACTGAGTACATGCACGTGGTCCACAGCTaGGAGAGTGTTCTGAGACAT +
Preference number: 4 (lower is better)
Translates to: HRYQAAPLIWAWNHTEYMHVVHS*ESVLRH
Trigger: ATGTCTCAGAACACTCTCCCAGCTGTGGACCACGTG...CATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGGTGCGGCCTGGTACCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp GCTACCCGGAGAGGAGGACCTGAATCTTCAGAAGACCAAGGACATCCACAACACCCTGAGTCTGCTAAGTaGTCCACGTGGTCCACAGCT +
Preference number: 4 (lower is better)
Translates to: ATRRGGPESSEDQGHPQHPESAK*STWSTA
Trigger: AGCTGTGGACCACGTGGACCACTTAGCAGACTCAGG...GTGTTGTGGATGTCCTTGGTCTTCTGAAGATTCAGGTCCTCCTCTCCGGGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp GAACAATACCCCTCTGCACAGCAGGGGCCTCCTTTAGATGCTTGTCCTGGAGATCAGCAGCCTTCGGCTTaGTTAAGCCAATGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: EQYPSAQQGPPLDACPGDQQPSA*LSQCPP
Trigger: AGGAGGGCATTGGCTTAACCAAGCCGAAGGCTGCTG...ATCTCCAGGACAAGCATCTAAAGGAGGCCCCTGCTGTGCAGAGGGGTATTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp ATCAAGACCAGGGGTGCCCCCTGTAGGCCAAGCCAGGTAAACAGAAGGAAGGGCCTTGGACCAAAGAGCTaGGAAGAGATGACAACTGAG +
Preference number: 4 (lower is better)
Translates to: IKTRGAPCRPSQVNRRKGLGPKS*EEMTTE
Trigger: CTCAGTTGTCATCTCTTCCCAGCTCTTTGGTCCAAG...GCCCTTCCTTCTGTTTACCTGGCTTGGCCTACAGGGGGCACCCCTGGTCTTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR CCA 90 bp CTGGCTGTGATGAGGAAAGAGGAGATGCAGTCCCTGGATCAAAATCACCGCAGGTCAGCAGCACTTTCCTaGCTCAGCTGTTGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: LAVMRKEEMQSLDQNHRRSAALS*LSCCQA
Trigger: GGCCTGACAACAGCTGAGCCAGGAAAGTGCTGCTGA...CCTGCGGTGATTTTGATCCAGGGACTGCATCTCCTCTTTCCTCATCACAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp AATAGACATCAGATGGCACAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCTTTAGATGCTTGTCCTaGAGATGCAATCTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: NRHQMAQPTQTAGCQHACFRCLS*RCNLPQ
Trigger: CTGGGGGAGATTGCATCTCCAGGACAAGCATCTAAA...GCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTGTGCCATCTGATGTCTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp TCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCGCAGGAACTCACATTTCCATTAGCCATGCACGGGGGTaGAAGGGTGGGACGATGAGA +
Preference number: 4 (lower is better)
Translates to: SRQASHLDSAFAGTHISISHARG*KGGTMR
Trigger: TCTCATCGTCCCACCCTTCCACCCCCGTGCATGGCT...AATGGAAATGTGAGTTCCTGCGAACGCTGAATCTAGGTGGGACGCTTGCCTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310611.8
ENST00000430195.2
CDS-3UTR CCA 90 bp TGTGCCCTGGCACAGGGACCAAATCAGCACAAATTTCTGAAGGGCCTCAAGGGCAGTCACTGCAAGGCGTaGCTAGCAGCAAGATTCCTG +
Preference number: 4 (lower is better)
Translates to: CALAQGPNQHKFLKGLKGSHCKA*LAARFL
Trigger: CAGGAATCTTGCTGCTAGCCACGCCTTGCAGTGACT...GCCCTTGAGGCCCTTCAGAAATTTGTGCTGATTTGGTCCCTGTGCCAGGGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR TCA 90 bp CAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATTTTGACCCAAGAACGCCAAGGCCATaGATACAGGGTGCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: QALHHLPLIPSTSPHFDPRTPRP*IQGARR
Trigger: TCTCCTGGCACCCTGTATTCATGGCCTTGGCGTTCT...TGGGTCAAAATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000533024.5
CDS-3UTR TCA 90 bp TCTAAGCTACCCGGAGAGGAGGACCTGAATCTTCAGAAGACCAAGGACATCCACGGCCTGGAACCATACTaGGTACATGCCCAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: SKLPGEEDLNLQKTKDIHGLEPY*VHAQKH
Trigger: GTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGCC...GTGGATGTCCTTGGTCTTCTGAAGATTCAGGTCCTCCTCTCCGGGTAGCTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp CTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATGGCCTGGAACCATACTaGGTACATGCCCAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: LQDQALHHLPLIPSTSPHGLEPY*VHAQKH
Trigger: GTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGCC...ATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000533024.5
CDS-3UTR TCA 90 bp TCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATTTACCAGGCCGCACCTTTaGTCTGGGCCTGGAACCATA +
Preference number: 4 (lower is better)
Translates to: SGSGSPSPSTHTQYISPFTRPHL*SGPGTI
Trigger: TATGGTTCCAGGCCCAGATCAAAGGTGCGGCCTGGT...AAATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000533024.5
CDS-3UTR TCA 90 bp GGGTGGAGCTACTGCACAACCAGCCACATCAGACAAGTCAACCTTGGCAGTCAGTGGAAATCTGGTGCATaGTCACCAGGGCTGGATAGA +
Preference number: 4 (lower is better)
Translates to: GWSYCTTSHIRQVNLGSQWKSGA*SPGLDR
Trigger: TCTATCCAGCCCTGGTGATCATGCACCAGATTTCCA...CTGACTGCCAAGGTTGACTTGTCTGATGTGGCTGGTTGTGCAGTAGCTCCACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR TCA 90 bp ATCACCAAAGGAACCATGATGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTGGGGCTCCTTTGCCCTaGGAAGTGATTTCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: ITKGTMMFKASVPPRFSVGAPLP*EVISGE
Trigger: CTCCCCCGAAATCACTTCTCAGGGCAAAGGAGCCCC...AACGCTGAATCTAGGTGGGACGCTTGCCTTGAACATCATGGTTCCTTTGGTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp GGAACCATGATGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCGCAGGAACAAGAAGGGCAAAGCATaGGATGCCTGGGGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: GTMMFKASVPPRFSVRRNKKGKA*DAWGSF
Trigger: AAAGGAGCCCCAGGCATCTCATGCTTTGCCCTTCTT...GTTCCTGCGAACGCTGAATCTAGGTGGGACGCTTGCCTTGAACATCATGGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp GAGGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCGCTAAGGCAAGAACCTaGGCCCTAAGAAGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: EASGSGSPSPSTHTQYISAKART*ALRRAK
Trigger: CTTTGCCCTTCTTAGGGCTCAGGTTCTTGCCTTAGC...GGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp GCACCTTTGATCTGGGCCTGGAACCATACTGAGTACATGCCCAGAAGCACCGTTTCCTATCTTCTCAACTaGGCCCAGACCACAGCTCAG +
Preference number: 4 (lower is better)
Translates to: APLIWAWNHTEYMPRSTVSYLLN*AQTTAQ
Trigger: CTGAGCTGTGGTCTGGGCTCAGTTGAGAAGATAGGA...AACGGTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp GGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCTGTCAGGCCTTGCCATaGTCTAGGGAGATCCTATCT +
Preference number: 4 (lower is better)
Translates to: GFRIRLSITFHSYPVHLPCQALP*SREILS
Trigger: AGATAGGATCTCCCTAGATCATGGCAAGGCCTGACA...GGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp ACCAAATCAGCACAAATTTCTGAAGGGCCTCAAGGGCAGAGCTGTCCCTCCAGGCAAAATCACCGCAGGTaGAATTCTCCATGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: TKSAQISEGPQGQSCPSRQNHRR*NSPCSP
Trigger: GGGGCTGCATGGAGAATTTCACCTGCGGTGATTTTG...CCTGGAGGGACAGCTCTGCCCTTGAGGCCCTTCAGAAATTTGTGCTGATTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp CATTTCCATTTTCTTCCTCGGCAAGTAGGATCTGGAAATCTGGTGCATGATCACTCCGGCCTGCCAGGATaGAGGGCTCCTCCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: HFHFLPRQVGSGNLVHDHSGLPG*RAPPGD
Trigger: GTCACCAGGAGGAGCCCTTCATCCTGGCAGGCCGGA...GTGATCATGCACCAGATTTCCAGATCCTACTTGCCGAGGAAGAAAATGGAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp GATGCAGTCCCTGGATCAAAATCACCGCAGGTGAAATTCTCCATGCAGCCCCAGCTTGGGAGGGGTATCTaGACCCAGAAGGGTAATCTC +
Preference number: 4 (lower is better)
Translates to: DAVPGSKSPQVKFSMQPQLGRGI*TQKGNL
Trigger: GAGATTACCCTTCTGGGTTCAGATACCCCTCCCAAG...CTGGGGCTGCATGGAGAATTTCACCTGCGGTGATTTTGATCCAGGGACTGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR TCA 90 bp GATGCAGTCCCTGGATCAAAATCACCGCAGGTGAAATTCTCCATGCAGCCCCAGCTTAGGGAGGATGCCTaGATCTCCCACAGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: DAVPGSKSPQVKFSMQPQLREDA*ISHSEV
Trigger: AACCTCACTGTGGGAGATTCAGGCATCCTCCCTAAG...CTGGGGCTGCATGGAGAATTTCACCTGCGGTGATTTTGATCCAGGGACTGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR TCA 90 bp TTTGGTTTCTGCAGTCCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCCAGAAATGCTGGGCTTaGGGCATCAAGACCAGGGGT +
Preference number: 4 (lower is better)
Translates to: FGFCSPWTSQEVRKPDHFQKCWA*GIKTRG
Trigger: ACCCCTGGTCTTGATGCCTCAAGCCCAGCATTTCTG...GAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGGACTGCAGAAACCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR TCA 90 bp GCTACCCGGAGAGGAGGACCTGAATCTTCAGAAGACCAAGGACATCCACAACACTCCCAGCCCCCAAGCTaGTGCACCTTTCATTTCATG +
Preference number: 4 (lower is better)
Translates to: ATRRGGPESSEDQGHPQHSQPPS*CTFHFM
Trigger: CATGAAATGAAAGGTGCATCAGCTTGGGGGCTGGGA...GTGTTGTGGATGTCCTTGGTCTTCTGAAGATTCAGGTCCTCCTCTCCGGGTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR GCA 90 bp CTCTCATCAAGTAGAGGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCCAAAGCTACCAGGTaGGCCAAGATCCCACTGCCT +
Preference number: 4 (lower is better)
Translates to: LSSSRGFRIRLSITFHSYPKATR*AKIPLP
Trigger: AGGCAGTGGGATCTTGGCGCACCTGGTAGCTTTGGG...GTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCCTCTACTTGATGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp ATGCCTGAATCTCCCACAGTGAGGTTTTCAAAACAAGACCTGGCTAGGCACGGTGGATGGCTTCAGCCATaGAGAGGCAGAACGCCAAGG +
Preference number: 4 (lower is better)
Translates to: MPESPTVRFSKQDLARHGGWLQP*RGRTPR
Trigger: CCTTGGCGTTCTGCCTCTGCATGGCTGAAGCCATCC...ACCGTGCCTAGCCAGGTCTTGTTTTGAAAACCTCACTGTGGGAGATTCAGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310611.8
ENST00000420578.7
CDS-3UTR GCA 90 bp TCTCATCAAGTAGAGGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCGGATGGCTTCAGCCATaGAGAGGCAGAACGCCAAGG +
Preference number: 4 (lower is better)
Translates to: SHQVEASGSGSPSPSTHTGWLQP*RGRTPR
Trigger: CCTTGGCGTTCTGCCTCTGCATGGCTGAAGCCATCC...GGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCCTCTACTTGATGAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000533024.5
CDS-3UTR GCA 90 bp CACCACCTCCCCCAAACCACAAGAAGTTCCTTAGATTCTGGCCAAGATGTGCAAGGATGGCTTCAGCCATaGAGAGGCAGAACGCCAAGG +
Preference number: 4 (lower is better)
Translates to: HHLPQTTRSSLDSGQDVQGWLQP*RGRTPR
Trigger: CCTTGGCGTTCTGCCTCTGCATGGCTGAAGCCATCC...TTGCACATCTTGGCCAGAATCTAAGGAACTTCTTGTGGTTTGGGGGAGGTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR GCA 90 bp CTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATGTGGAGCCGGATCCGTaGTTTTCGGGAGCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: LQDQALHHLPLIPSTSPHVEPDP*FSGAEE
Trigger: TTCTTCTGCTCCCGAAAAGCACGGATCCGGCTCCAC...ATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000533024.5
CDS-3UTR GCA 90 bp GAGGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCAGCAGCTTTGGTTTCTaGAGTCCCTGGACCAGCCAA +
Preference number: 4 (lower is better)
Translates to: EASGSGSPSPSTHTQYISSSFGF*SPWTSQ
Trigger: TTGGCTGGTCCAGGGACTGCAGAAACCAAAGCTGCT...GGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000533024.5
CDS-3UTR GCA 90 bp ACCAAATCAGCACAAATTTCTGAAGGGCCTCAAGGGCAGAGCTGTCCCTCCAGGAGTCCAGCCCTCATTTaGCAGCTGGCACCAAACTCA +
Preference number: 4 (lower is better)
Translates to: TKSAQISEGPQGQSCPSRSPALI*QLAPNS
Trigger: TGAGTTTGGTGCCAGCTGGCAAATGAGGGCTGGACT...CCTGGAGGGACAGCTCTGCCCTTGAGGCCCTTCAGAAATTTGTGCTGATTTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp TCTAAGCTACCCGGAGAGGAGGACCTGAATCTTCAGAAGACCAAGGACATCCACACATCTAGGAACACCTaGCCCTGCTCCTGGGAACTG +
Preference number: 4 (lower is better)
Translates to: SKLPGEEDLNLQKTKDIHTSRNT*PCSWEL
Trigger: CAGTTCCCAGGAGCAGGGGCAGGTGTTCCTAGATGT...GTGGATGTCCTTGGTCTTCTGAAGATTCAGGTCCTCCTCTCCGGGTAGCTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp CAAACCAACCTCCTTACTTCTAAGCTACCCGGAGAGGAGGACCTGAATCTTCAGGGACACTTCTGCCCTTaGTGTCCCCATTCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: QTNLLTSKLPGEEDLNLQGHFCP*CPHSVP
Trigger: GGGGACAGAATGGGGACAGCAAGGGCAGAAGTGTCC...CTGAAGATTCAGGTCCTCCTCTCCGGGTAGCTTAGAAGTAAGGAGGTTGGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp GTCTCTCATCAAGTAGAGGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATTGCTTGTCCTGGAGATaGAATCTCCCCCAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: VSHQVEASGSGSPSPSTHCLSWR*NLPQEG
Trigger: CCCCTCCTGGGGGAGATTGCATCTCCAGGACAAGCA...ATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCCTCTACTTGATGAGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp CAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATTTTGACCCAGGAACAATACCCCTCTaGACAGCAGGGGCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: QALHHLPLIPSTSPHFDPGTIPL*TAGASF
Trigger: AAAGGAGGCCCCTGCTGTGCAGAGGGGTATTGTTCC...TGGGTCAAAATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp TCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATTTCAAGCTGGTGAACTTTaGCTGGCCCTCCTACCCTGC +
Preference number: 4 (lower is better)
Translates to: SGSGSPSPSTHTQYISPFQAGEL*LALLPC
Trigger: GCAGGGTAGGAGGGCCAGGCAAAGTTCACCAGCTTG...AAATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp AGTGGTAACAGCCTACCACTTAAGAGCCAAGAAGGTGAGGCTGGAGGACTTCCCCCCCAGATACAGAGCTaGTCCCATTCCATACCAACC +
Preference number: 4 (lower is better)
Translates to: SGNSLPLKSQEGEAGGLPPQIQS*SHSIPT
Trigger: GGTTGGTATGGAATGGGAGCAGCTCTGTATCTGGGG...GGGAAGTCCTCCAGCCTCACCTTCTTGGCTCTTAAGTGGTAGGCTGTTACCACT
53% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR GCA 90 bp TGTCTCTCATCAAGTAGAGGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCACTCAACAGCCACCCCTaGCACCACCATAGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: CLSSSRGFRIRLSITFHSLNSHP*HHHRSQ
Trigger: CTGAGACCTATGGTGGTGGCAGGGGTGGCTGTTGAG...TGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCCTCTACTTGATGAGAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR GCA 90 bp TGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCGCAGGAACTCACATTTCCTACCAGAAGCCTCCCTaGTCTCTGAGCTTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: CSRQASHLDSAFAGTHISYQKPP*SLSLQR
Trigger: CCTCTGCAAGCTCAGAGAGCAGGGAGGCTTCTGGTA...GGAAATGTGAGTTCCTGCGAACGCTGAATCTAGGTGGGACGCTTGCCTTGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310611.8
ENST00000430195.2
CDS-3UTR GCA 90 bp GCCTGGAACCATACTGAGTACATGCCCAGAAGCACCGTTACTGTAGCCATCAGGGGATGGCTTCAGCCATaGAGAGGCAGAATGGTTCCT +
Preference number: 4 (lower is better)
Translates to: AWNHTEYMPRSTVTVAIRGWLQP*RGRMVP
Trigger: AGGAACCATTCTGCCTCTGCATGGCTGAAGCCATCC...CCTGATGGCTACAGTAACGGTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527072.5
CDS-3UTR CCA 90 bp TCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCGCAGGAACTCACATTTCCATTACCTGTTTTGGTTCCTaGCCGGGACAGCGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: SRQASHLDSAFAGTHISITCFGS*PGQRCQ
Trigger: CTGACAGCGCTGTCCCGGCCAGGAACCAAAACAGGT...AATGGAAATGTGAGTTCCTGCGAACGCTGAATCTAGGTGGGACGCTTGCCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310611.8
ENST00000430195.2
CDS-3UTR CCA 90 bp ATCACCAAAGGAACCATGATGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTTCAGGGGACCTGTTTTaGTTCCTGGCCGGGACAGCG +
Preference number: 4 (lower is better)
Translates to: ITKGTMMFKASVPPRFSVSGDLF*FLAGTA
Trigger: CGCTGTCCCGGCCAGGAACCAAAACAGGTCCCCTGA...AACGCTGAATCTAGGTGGGACGCTTGCCTTGAACATCATGGTTCCTTTGGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000430195.2
CDS-3UTR CCA 90 bp TCCTTAGATTCTGGCCAAGATGTGCAATTTTGTCTGCCATGCCTTGCAGCACTTCCACCCTTGAGACCCTaGCTGCCCGGGGACAAAGGA +
Preference number: 4 (lower is better)
Translates to: SLDSGQDVQFCLPCLAALPPLRP*LPGDKG
Trigger: TCCTTTGTCCCCGGGCAGCCAGGGTCTCAAGGGTGG...AAGTGCTGCAAGGCATGGCAGACAAAATTGCACATCTTGGCCAGAATCTAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR CCA 90 bp AAGAACTACCCCCTGAGTCTGCTAAGTGGTCCACGTGGTCCACAGCTGGGAGAGCCTTTGATCTGGGCCTaGAACCATACTGAGTACATG +
Preference number: 4 (lower is better)
Translates to: KNYPLSLLSGPRGPQLGEPLIWA*NHTEYM
Trigger: CATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGG...CTCTCCCAGCTGTGGACCACGTGGACCACTTAGCAGACTCAGGGGGTAGTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp TCTAAGCTACCCGGAGAGGAGGACCTGAATCTTCAGAAGACCAAGGACATCCACGCCGCACCTTTGATCTaGGCCTGGAACCATACTGAG +
Preference number: 4 (lower is better)
Translates to: SKLPGEEDLNLQKTKDIHAAPLI*AWNHTE
Trigger: CTCAGTATGGTTCCAGGCCCAGATCAAAGGTGCGGC...GTGGATGTCCTTGGTCTTCTGAAGATTCAGGTCCTCCTCTCCGGGTAGCTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp CTTACTTCTAAGCTACCCGGAGAGGAGGACCTGAATCTTCAGAAGACCAAGGACCATGATCACCAGGGCTaGATAGACGGGCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: LTSKLPGEEDLNLQKTKDHDHQG*IDGQCQ
Trigger: CTGGCACTGCCCGTCTATCCAGCCCTGGTGATCATG...GTCCTTGGTCTTCTGAAGATTCAGGTCCTCCTCTCCGGGTAGCTTAGAAGTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp TCTCATCAAGTAGAGGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCATGATCACCAGGGCTaGATAGACGGGCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: SHQVEASGSGSPSPSTHTHDHQG*IDGQCQ
Trigger: CTGGCACTGCCCGTCTATCCAGCCCTGGTGATCATG...GGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCCTCTACTTGATGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000533024.5
CDS-3UTR CCA 90 bp TGTCTCTCATCAAGTAGAGGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCAGCTAAGTGGTCCACGTaGTCCACAGCTGGGAGAGTG +
Preference number: 4 (lower is better)
Translates to: CLSSSRGFRIRLSITFHSAKWST*STAGRV
Trigger: CACTCTCCCAGCTGTGGACCACGTGGACCACTTAGC...TGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCCTCTACTTGATGAGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp CTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATAAGGAAGATCTTAGCTaGGCTAGGCAGCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: LQDQALHHLPLIPSTSPHKEDLS*ARQPSQ
Trigger: CTGGCTGGGCTGCCTAGCCCAGCTAAGATCTTCCTT...ATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp ATCACCAAAGGAACCATGATGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCAGCAAGGAGCGGGGTaGTCTCTGGAGGGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: ITKGTMMFKASVPPRFSVQQGAG*SLEGRE
Trigger: CTCTCTTCCCTCCAGAGACCACCCCGCTCCTTGCTG...AACGCTGAATCTAGGTGGGACGCTTGCCTTGAACATCATGGTTCCTTTGGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp CATTTCCATTTTCTTCCTCGGCAAGTAGGATCTGGAAATCTGGTGCATGATCACACCTGCCCCTGCTCCTaGGAACTGGAGCTCCAGCGC +
Preference number: 4 (lower is better)
Translates to: HFHFLPRQVGSGNLVHDHTCPCS*ELELQR
Trigger: GCGCTGGAGCTCCAGTTCCCAGGAGCAGGGGCAGGT...GTGATCATGCACCAGATTTCCAGATCCTACTTGCCGAGGAAGAAAATGGAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp AAGAACTACCCCCTGAGTCTGCTAAGTGGTCCACGTGGTCCACAGCTGGGAGAGTTTAGATGCTTGTCCTaGAGATGCAATCTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: KNYPLSLLSGPRGPQLGEFRCLS*RCNLPQ
Trigger: CTGGGGGAGATTGCATCTCCAGGACAAGCATCTAAA...CTCTCCCAGCTGTGGACCACGTGGACCACTTAGCAGACTCAGGGGGTAGTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp CAGCACCTCAGGCAGGCTCAGGCTTTACGGCATTGCCTGCTTGCTCTTAGAGCATTTAGATGCTTGTCCTaGAGATGCAATCTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: QHLRQAQALRHCLLALRAFRCLS*RCNLPQ
Trigger: CTGGGGGAGATTGCATCTCCAGGACAAGCATCTAAA...TGCTCTAAGAGCAAGCAGGCAATGCCGTAAAGCCTGAGCCTGCCTGAGGTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp TTCTGCAGTCCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTAAATGCGGGGAACAGAGGATaGCGGAGGAGGGAACACACA +
Preference number: 4 (lower is better)
Translates to: FCSPWTSQEVRKPDHFLNAGNRG*RRREHT
Trigger: TGTGTGTTCCCTCCTCCGCCATCCTCTGTTCCCCGC...ATTTAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGGACTGCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp CCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTAAATAGATCCCTTAGCCATGCACGGGGGTaGAAGGGTGGGACGATGAGA +
Preference number: 4 (lower is better)
Translates to: PWTSQEVRKPDHFLNRSLSHARG*KGGTMR
Trigger: TCTCATCGTCCCACCCTTCCACCCCCGTGCATGGCT...AAGGGATCTATTTAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR CCA 90 bp ACCAAATCAGCACAAATTTCTGAAGGGCCTCAAGGGCAGAGCTGTCCCTCCAGGAGTCACTGCAAGGCGTaGCTAGCAGCAAGATTCCTG +
Preference number: 4 (lower is better)
Translates to: TKSAQISEGPQGQSCPSRSHCKA*LAARFL
Trigger: CAGGAATCTTGCTGCTAGCCACGCCTTGCAGTGACT...CCTGGAGGGACAGCTCTGCCCTTGAGGCCCTTCAGAAATTTGTGCTGATTTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR CCA 90 bp AAGGTGAGGCTGGAGGACTTCCCCAGATACAGAGCTGCTCCCATTCCATACCAAGAAGGGCAGGAGTACTaGAAGTTCAGGCTCAACAGC +
Preference number: 4 (lower is better)
Translates to: KVRLEDFPRYRAAPIPYQEGQEY*KFRLNS
Trigger: GCTGTTGAGCCTGAACTTCCAGTACTCCTGCCCTTC...TTGGTATGGAATGGGAGCAGCTCTGTATCTGGGGAAGTCCTCCAGCCTCACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR CCA 90 bp CAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATTTTGAAAAGACTGGTTCCTaGCCGGGACAGCGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: QDQALHHLPLIPSTSPHFEKTGS*PGQRCQ
Trigger: CTGACAGCGCTGTCCCGGCCAGGAACCAGTCTTTTC...AAAATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420578.7
ENST00000496961.5
CDS-3UTR CCA 90 bp GCTACTGCACAACCAGCCACATCAGACAAGTCAACCTTGGCAGTCAGTGAAATGGAAAAGACTGGTTCCTaGCCGGGACAGCGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: ATAQPATSDKSTLAVSEMEKTGS*PGQRCQ
Trigger: CTGACAGCGCTGTCCCGGCCAGGAACCAGTCTTTTC...CATTTCACTGACTGCCAAGGTTGACTTGTCTGATGTGGCTGGTTGTGCAGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR CCA 90 bp GGGCATAATGAGTTACGTGGAGAGGACACTTCTGCCCTTGCTGTCCCCATTCTGGCCTCATGTCTGGCTTaGAGGCCTGAGAAAAAGGAG +
Preference number: 4 (lower is better)
Translates to: GHNELRGEDTSALAVPILASCLA*RPEKKE
Trigger: CTCCTTTTTCTCAGGCCTCCAAGCCAGACATGAGGC...CAGAATGGGGACAGCAAGGGCAGAAGTGTCCTCTCCACGTAACTCATTATGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430195.2
ENST00000496961.5
3UTR CAA 72 bp GAGGACTACTTGGAGTTTGGAGTTCTCTCTTCTGTTTaGGCCTGTGCCAAGCCCAAGGAAGTCCATGGCTGC +
Preference number: 4 (lower is better)
Translates to: EDYLEFGVLSSV*ACAKPKEVHGC
Trigger: GCAGCCATGGACTTCCTTGGGCTTGGCACAGGCCAAAACAGAAGAGAGAACTCCAAACTCCAAGTAGTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR TCA 90 bp AGTGGTAACAGCCTACCACTTAAGAGCCAAGAAGGTGAGGCTGGAGGACTTCCCCTGTCAGAAAGATGGTaGAGCCCAAAGCTACCAGGT +
Preference number: 4 (lower is better)
Translates to: SGNSLPLKSQEGEAGGLPLSERW*SPKLPG
Trigger: ACCTGGTAGCTTTGGGCTTCACCATCTTTCTGACAG...GGGAAGTCCTCCAGCCTCACCTTCTTGGCTCTTAAGTGGTAGGCTGTTACCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR TCA 90 bp GCCTGGAACCATACTGAGTACATGCCCAGAAGCACCGTTACTGTAGCCATCAGGCTGTCAGAAAGATGGTaGAGCCCAAAGCTACCAGGT +
Preference number: 4 (lower is better)
Translates to: AWNHTEYMPRSTVTVAIRLSERW*SPKLPG
Trigger: ACCTGGTAGCTTTGGGCTTCACCATCTTTCTGACAG...CCTGATGGCTACAGTAACGGTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
CDS-3UTR TCA 90 bp CCCAGTACATCTCCCCATTTTGACCCACTGAATTATTCCTCAACAATAGCAGCTTGCCAGGACACCAGATaGGGCAGCTCACTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: PSTSPHFDPLNYSSTIAACQDTR*GSSLRV
Trigger: GACCCGCAGTGAGCTGCCTCATCTGGTGTCCTGGCA...AGCTGCTATTGTTGAGGAATAATTCAGTGGGTCAAAATGGGGAGATGTACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR TCA 90 bp CTTACTTCTAAGCTACCCGGAGAGGAGGACCTGAATCTTCAGAAGACCAAGGACTCAGATGGTAGAGCTTaGGGCGAGCCACCCTTGAGA +
Preference number: 4 (lower is better)
Translates to: LTSKLPGEEDLNLQKTKDSDGRA*GEPPLR
Trigger: TCTCAAGGGTGGCTCGCCTCAAGCTCTACCATCTGA...GTCCTTGGTCTTCTGAAGATTCAGGTCCTCCTCTCCGGGTAGCTTAGAAGTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp TGTCTCTCATCAAGTAGAGGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATCAGATGGTAGAGCTTaGGGCGAGCCACCCTTGAGA +
Preference number: 4 (lower is better)
Translates to: CLSSSRGFRIRLSITFHSSDGRA*GEPPLR
Trigger: TCTCAAGGGTGGCTCGCCTCAAGCTCTACCATCTGA...TGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCCTCTACTTGATGAGAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000533024.5
CDS-3UTR TCA 90 bp GCTACTGCACAACCAGCCACATCAGACAAGTCAACCTTGGCAGTCAGTGAAATGGGCCTGGAACCATACTaGGTACATGCCCAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: ATAQPATSDKSTLAVSEMGLEPY*VHAQKH
Trigger: GTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGCC...CATTTCACTGACTGCCAAGGTTGACTTGTCTGATGTGGCTGGTTGTGCAGTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR TCA 90 bp TTCTGCAGTCCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTAAATACCAGGCCGCACCTTTaGTCTGGGCCTGGAACCATA +
Preference number: 4 (lower is better)
Translates to: FCSPWTSQEVRKPDHFLNTRPHL*SGPGTI
Trigger: TATGGTTCCAGGCCCAGATCAAAGGTGCGGCCTGGT...ATTTAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGGACTGCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR TCA 90 bp ATCACCAAAGGAACCATGATGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTACCAGGCCGCACCTTTaGTCTGGGCCTGGAACCATA +
Preference number: 4 (lower is better)
Translates to: ITKGTMMFKASVPPRFSVTRPHL*SGPGTI
Trigger: TATGGTTCCAGGCCCAGATCAAAGGTGCGGCCTGGT...AACGCTGAATCTAGGTGGGACGCTTGCCTTGAACATCATGGTTCCTTTGGTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR TCA 90 bp GCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATGGAAATCTGGTGCATaGTCACCAGGGCTGGATAGA +
Preference number: 4 (lower is better)
Translates to: ASGSGSPSPSTHTQYISPWKSGA*SPGLDR
Trigger: TCTATCCAGCCCTGGTGATCATGCACCAGATTTCCA...TGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000533024.5
CDS-3UTR TCA 90 bp TCCCCCAGGAGGGGCATAATGAGTTACGTGGAGAGGACACTTCTGCCCTTGCTGTCTGAGACATCGACCTaGCAGACGCTGTATATTAGA +
Preference number: 4 (lower is better)
Translates to: SPRRGIMSYVERTLLPLLSETST*QTLYIR
Trigger: TCTAATATACAGCGTCTGTCAGGTCGATGTCTCAGA...CAGCAAGGGCAGAAGTGTCCTCTCCACGTAACTCATTATGCCCCTCCTGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp ATGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCGCAGGAACTCACATTTCGCTGGGAGAGTGTTCTaGGACATCGACCTGACAGAC +
Preference number: 4 (lower is better)
Translates to: MFKASVPPRFSVRRNSHFAGRVF*DIDLTD
Trigger: GTCTGTCAGGTCGATGTCTCAGAACACTCTCCCAGC...GAAATGTGAGTTCCTGCGAACGCTGAATCTAGGTGGGACGCTTGCCTTGAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp GAGCCAAGTGAATACCCCAGACATGAGCAGAATAAGGGAGGTGCGGGGAACAGAATCAGCACAAATTTCTaGAGGGCCTCAAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: EPSEYPRHEQNKGGAGNRISTNF*RASRAE
Trigger: CTCTGCCCTTGAGGCCCTTCAGAAATTTGTGCTGAT...TCTGTTCCCCGCACCTCCCTTATTCTGCTCATGTCTGGGGTATTCACTTGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp CAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATTTTGACCCACAGAAGACCCTCACCTaGGTCCCTTCTTTCCACAGT +
Preference number: 4 (lower is better)
Translates to: QALHHLPLIPSTSPHFDPQKTLT*VPSFHS
Trigger: ACTGTGGAAAGAAGGGACTCAGGTGAGGGTCTTCTG...TGGGTCAAAATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp TCTCATCAAGTAGAGGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCTCCCAGAGTTCCCTGTaGGCTATGTCGACTTGCCTC +
Preference number: 4 (lower is better)
Translates to: SHQVEASGSGSPSPSTHTSQSSL*AMSTCL
Trigger: GAGGCAAGTCGACATAGCTCACAGGGAACTCTGGGA...GGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCCTCTACTTGATGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp CTTACTTCTAAGCTACCCGGAGAGGAGGACCTGAATCTTCAGAAGACCAAGGACTCCCAGAGTTCCCTGTaGGCTATGTCGACTTGCCTC +
Preference number: 4 (lower is better)
Translates to: LTSKLPGEEDLNLQKTKDSQSSL*AMSTCL
Trigger: GAGGCAAGTCGACATAGCTCACAGGGAACTCTGGGA...GTCCTTGGTCTTCTGAAGATTCAGGTCCTCCTCTCCGGGTAGCTTAGAAGTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp TCCAGAAGACCCTCACCTGAGTCCCTTCTTTCCACAGTGCCTGACCCCCTGTGCCTGTCCCCATACTATTaGATCAAACCAACCTCCTTA +
Preference number: 4 (lower is better)
Translates to: SRRPSPESLLSTVPDPLCLSPYY*IKPTSL
Trigger: TAAGGAGGTTGGTTTGATTCAATAGTATGGGGACAG...GCACAGGGGGTCAGGCACTGTGGAAAGAAGGGACTCAGGTGAGGGTCTTCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp ACCATGATGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCGCAGGAACTCACAAAATCACCGCAGGTaGAATTCTCCATGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: TMMFKASVPPRFSVRRNSQNHRR*NSPCSP
Trigger: GGGGCTGCATGGAGAATTTCACCTGCGGTGATTTTG...TGAGTTCCTGCGAACGCTGAATCTAGGTGGGACGCTTGCCTTGAACATCATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp CTTACTTCTAAGCTACCCGGAGAGGAGGACCTGAATCTTCAGAAGACCAAGGACAAGGGCTCCTCCTGGTaGCCTATTCCCTACACTGCA +
Preference number: 4 (lower is better)
Translates to: LTSKLPGEEDLNLQKTKDKGSSW*PIPYTA
Trigger: TGCAGTGTAGGGAATAGGTCACCAGGAGGAGCCCTT...GTCCTTGGTCTTCTGAAGATTCAGGTCCTCCTCTCCGGGTAGCTTAGAAGTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp CAAACCAACCTCCTTACTTCTAAGCTACCCGGAGAGGAGGACCTGAATCTTCAGAAGGGCTCCTCCTGGTaGCCTATTCCCTACACTGCA +
Preference number: 4 (lower is better)
Translates to: QTNLLTSKLPGEEDLNLQKGSSW*PIPYTA
Trigger: TGCAGTGTAGGGAATAGGTCACCAGGAGGAGCCCTT...CTGAAGATTCAGGTCCTCCTCTCCGGGTAGCTTAGAAGTAAGGAGGTTGGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp AGACAGGAACAATACCCCTCTGCACAGCAGGGGCCTCCTTTAGATGCTTGTCCTAAAGGCAAAACAGGCTaGCCACTAGCAGCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: RQEQYPSAQQGPPLDACPKGKTG*PLAAFP
Trigger: AGGGAAAGCTGCTAGTGGTCAGCCTGTTTTGCCTTT...AGGACAAGCATCTAAAGGAGGCCCCTGCTGTGCAGAGGGGTATTGTTCCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp ATGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCGCAGGAACTCACATTTCCAGAAATGCTGGGCTTaGGGCATCAAGACCAGGGGT +
Preference number: 4 (lower is better)
Translates to: MFKASVPPRFSVRRNSHFQKCWA*GIKTRG
Trigger: ACCCCTGGTCTTGATGCCTCAAGCCCAGCATTTCTG...GAAATGTGAGTTCCTGCGAACGCTGAATCTAGGTGGGACGCTTGCCTTGAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310611.8
ENST00000430195.2
CDS-3UTR TCA 90 bp TTTGGTTTCTGCAGTCCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTCCCAGCCCCCAAGCTaGTGCACCTTTCATTTCATG +
Preference number: 4 (lower is better)
Translates to: FGFCSPWTSQEVRKPDHFSQPPS*CTFHFM
Trigger: CATGAAATGAAAGGTGCATCAGCTTGGGGGCTGGGA...GAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGGACTGCAGAAACCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR GCA 90 bp ATCACCAAAGGAACCATGATGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCCCAAAGCTACCAGGTaGGCCAAGATCCCACTGCCT +
Preference number: 4 (lower is better)
Translates to: ITKGTMMFKASVPPRFSVPKATR*AKIPLP
Trigger: AGGCAGTGGGATCTTGGCGCACCTGGTAGCTTTGGG...AACGCTGAATCTAGGTGGGACGCTTGCCTTGAACATCATGGTTCCTTTGGTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
CDS-3UTR GCA 90 bp GATAGGGACGGAGTAAACCCATACTGCAGGTTTCCCAGCCCCCAAGCTGATGCAACCATACTGAGTACATaGCCAGAAGCACCGTTACTG +
Preference number: 4 (lower is better)
Translates to: DRDGVNPYCRFPSPQADATILST*PEAPLL
Trigger: CAGTAACGGTGCTTCTGGGCATGTACTCAGTATGGT...TGCATCAGCTTGGGGGCTGGGAAACCTGCAGTATGGGTTTACTCCGTCCCTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR GCA 90 bp GGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCACCATACTGAGTACATaGCCAGAAGCACCGTTACTG +
Preference number: 4 (lower is better)
Translates to: GFRIRLSITFHSYPVHLPTILST*PEAPLL
Trigger: CAGTAACGGTGCTTCTGGGCATGTACTCAGTATGGT...GGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000533024.5
CDS-3UTR GCA 90 bp GGAACCATGATGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCGCAGGAACGATCTGGAAATCTGGTaGATGATCACCAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GTMMFKASVPPRFSVRRNDLEIW*MITRAG
Trigger: TCCAGCCCTGGTGATCATGCACCAGATTTCCAGATC...GTTCCTGCGAACGCTGAATCTAGGTGGGACGCTTGCCTTGAACATCATGGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR GCA 90 bp GCACCTTTGATCTGGGCCTGGAACCATACTGAGTACATGCCCAGAAGCACCGTTGGACCAGCCAAGAAGTaGGAAAACCTGACCACTTCT +
Preference number: 4 (lower is better)
Translates to: APLIWAWNHTEYMPRSTVGPAKK*ENLTTS
Trigger: AGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCC...AACGGTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR GCA 90 bp CTGGCTGTGATGAGGAAAGAGGAGATGCAGTCCCTGGATCAAAATCACCGCAGGGGACCAGCCAAGAAGTaGGAAAACCTGACCACTTCT +
Preference number: 4 (lower is better)
Translates to: LAVMRKEEMQSLDQNHRRGPAKK*ENLTTS
Trigger: AGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCC...CCTGCGGTGATTTTGATCCAGGGACTGCATCTCCTCTTTCCTCATCACAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp AGACAGGAACAATACCCCTCTGCACAGCAGGGGCCTCCTTTAGATGCTTGTCCTGGACCAGCCAAGAAGTaGGAAAACCTGACCACTTCT +
Preference number: 4 (lower is better)
Translates to: RQEQYPSAQQGPPLDACPGPAKK*ENLTTS
Trigger: AGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCC...AGGACAAGCATCTAAAGGAGGCCCCTGCTGTGCAGAGGGGTATTGTTCCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp GGTTTCTGCAGTCCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTAAGCAGCTTTGGTTTCTaGAGTCCCTGGACCAGCCAA +
Preference number: 4 (lower is better)
Translates to: GFCSPWTSQEVRKPDHFLSSFGF*SPWTSQ
Trigger: TTGGCTGGTCCAGGGACTGCAGAAACCAAAGCTGCT...TAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGGACTGCAGAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR GCA 90 bp CAAACCAACCTCCTTACTTCTAAGCTACCCGGAGAGGAGGACCTGAATCTTCAGGGATCAGAAAAGCCCTaGCCCACTTCCTTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: QTNLLTSKLPGEEDLNLQGSEKP*PTSLAL
Trigger: AAGGGCCAAGGAAGTGGGGCAGGGCTTTTCTGATCC...CTGAAGATTCAGGTCCTCCTCTCCGGGTAGCTTAGAAGTAAGGAGGTTGGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp CAAACCAACCTCCTTACTTCTAAGCTACCCGGAGAGGAGGACCTGAATCTTCAGGGAACTACTTTCAGCTaGAGCAAGGAGCGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: QTNLLTSKLPGEEDLNLQGTTFS*SKERGG
Trigger: ACCACCCCGCTCCTTGCTGCAGCTGAAAGTAGTTCC...CTGAAGATTCAGGTCCTCCTCTCCGGGTAGCTTAGAAGTAAGGAGGTTGGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp GGTTTCTGCAGTCCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTAGCTGTTGTCAGGCCTTaGCATGATCTAGGGAGATCC +
Preference number: 4 (lower is better)
Translates to: GFCSPWTSQEVRKPDHFLAVVRP*HDLGRS
Trigger: GGATCTCCCTAGATCATGGCAAGGCCTGACAACAGC...TAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGGACTGCAGAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp GGTTTCTGCAGTCCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTATGGAGAGGACACTTCTaGCCTTGCTGTCCCCATTCT +
Preference number: 4 (lower is better)
Translates to: GFCSPWTSQEVRKPDHFLWRGHF*PCCPHS
Trigger: AGAATGGGGACAGCAAGGGCAGAAGTGTCCTCTCCA...TAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGGACTGCAGAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp GTCTCTCATCAAGTAGAGGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATGGAACAATACCCCTCTaGACAGCAGGGGCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: VSHQVEASGSGSPSPSTHGTIPL*TAGASF
Trigger: AAAGGAGGCCCCTGCTGTGCAGAGGGGTATTGTTCC...ATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCCTCTACTTGATGAGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp CTTACTTCTAAGCTACCCGGAGAGGAGGACCTGAATCTTCAGAAGACCAAGGACCTCCTCCAAGGCGTTTaGTTCCTTGCTGAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: LTSKLPGEEDLNLQKTKDLLQGV*FLAEEP
Trigger: TGGCTCCTCAGCAAGGAAGCAAACGCCTTGGAGGAG...GTCCTTGGTCTTCTGAAGATTCAGGTCCTCCTCTCCGGGTAGCTTAGAAGTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp TGTCTCTCATCAAGTAGAGGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCACAGACGAGAAGTCACTaGAAGGCGTGGCTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: CLSSSRGFRIRLSITFHSQTRSH*KAWLAA
Trigger: TGCTGCTAGCCACGCCTTGCAGTGACTTCTCGTCTG...TGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCCTCTACTTGATGAGAGACA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR GCA 90 bp TTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATTACTGAGAGGACTCAGTaGCCACTCCCAGACGAGAAG +
Preference number: 4 (lower is better)
Translates to: FRIRLSITFHSYPVHLPITERTQ*PLPDEK
Trigger: CTTCTCGTCTGGGAGTGGGCACTGAGTCCTCTCAGT...AATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR GCA 90 bp CTTAAGAGCCAAGAAGGTGAGGCTGGAGGACTTCCCCAGATACAGAGCTGCTCCTACACAGGATCTTTGTaGCAACCAGACACAGGAGCA +
Preference number: 4 (lower is better)
Translates to: LKSQEGEAGGLPQIQSCSYTGSL*QPDTGA
Trigger: TGCTCCTGTGTCTGGTTGGCACAAAGATCCTGTGTA...GGAGCAGCTCTGTATCTGGGGAAGTCCTCCAGCCTCACCTTCTTGGCTCTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR GCA 90 bp TGTGCCCTGGCACAGGGACCAAATCAGCACAAATTTCTGAAGGGCCTCAAGGGCCTGAGAAAAAGGAGGTaGTCTCATACATCCGCCAAG +
Preference number: 4 (lower is better)
Translates to: CALAQGPNQHKFLKGLKGLRKRR*SHTSAK
Trigger: CTTGGCGGATGTATGAGAGCACCTCCTTTTTCTCAG...GCCCTTGAGGCCCTTCAGAAATTTGTGCTGATTTGGTCCCTGTGCCAGGGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp CTCTCTTCTGTTTTGGCCTGTGCCAAGCCCAAGGAAGTCCATGGCTGCATCTCTTTCTGTTTTGGCCTGTaGCAAGCCCAAGGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: LSSVLACAKPKEVHGCISFCFGL*QAQGSP
Trigger: TGGACTTCCTTGGGCTTGGCACAGGCCAAAACAGAA...AGAGATGCAGCCATGGACTTCCTTGGGCTTGGCACAGGCCAAAACAGAAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR CCA 90 bp CATTTCCATTTTCTTCCTCGGCAAGTAGGATCTGGAAATCTGGTGCATGATCACTCTCGGCTCCCCAGCTaGAGCGGGAACCAGACCTAC +
Preference number: 4 (lower is better)
Translates to: HFHFLPRQVGSGNLVHDHSRLPS*SGNQTY
Trigger: GTAGGTCTGGTTCCCGCTCCAGCTGGGGAGCCGAGA...GTGATCATGCACCAGATTTCCAGATCCTACTTGCCGAGGAAGAAAATGGAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
CDS-3UTR CCA 90 bp AAGTCTGATGAGGACTACTTGGAGTTTGGAGTTCTCTCTTCTGTTTTGGCCTGTTCTCGGCTCCCCAGCTaGAGCGGGAACCAGACCTAC +
Preference number: 4 (lower is better)
Translates to: KSDEDYLEFGVLSSVLACSRLPS*SGNQTY
Trigger: GTAGGTCTGGTTCCCGCTCCAGCTGGGGAGCCGAGA...ACAGGCCAAAACAGAAGAGAGAACTCCAAACTCCAAGTAGTCCTCATCAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR CCA 90 bp TGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCGCAGGAACTCACATTTCCGTGAGAAGAGTAGGATaGCTTCAGCCATGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: CSRQASHLDSAFAGTHISVRRVG*LQPCRG
Trigger: GCCTCTGCATGGCTGAAGCCATCCTACTCTTCTCAC...GGAAATGTGAGTTCCTGCGAACGCTGAATCTAGGTGGGACGCTTGCCTTGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR CCA 90 bp GGTTTCTGCAGTCCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTAGTGAGAAGAGTAGGATaGCTTCAGCCATGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: GFCSPWTSQEVRKPDHFLVRRVG*LQPCRG
Trigger: GCCTCTGCATGGCTGAAGCCATCCTACTCTTCTCAC...TAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGGACTGCAGAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR CCA 90 bp TCCTTAGATTCTGGCCAAGATGTGCAATTTTGTCTGCCATGCCTTGCAGCACTTGTCTGCCCTGCCCAGTaGAGCCGGATCCGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: SLDSGQDVQFCLPCLAALVCPAQ*SRIRAF
Trigger: AAAAGCACGGATCCGGCTCCACTGGGCAGGGCAGAC...AAGTGCTGCAAGGCATGGCAGACAAAATTGCACATCTTGGCCAGAATCTAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR CCA 90 bp CTCCCCCAAACCACAAGAAGTTCCTTAGATTCTGGCCAAGATGTGCAATTTTGTGTGCCTGGACAGCAGTaGCCAGCAGTGTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: LPQTTRSSLDSGQDVQFCVPGQQ*PAVSGL
Trigger: GAGCCCTGACACTGCTGGCCACTGCTGTCCAGGCAC...ACAAAATTGCACATCTTGGCCAGAATCTAAGGAACTTCTTGTGGTTTGGGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR CCA 90 bp TCTCATCAAGTAGAGGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCGCCGCACCTTTGATCTaGGCCTGGAACCATACTGAG +
Preference number: 4 (lower is better)
Translates to: SHQVEASGSGSPSPSTHTAAPLI*AWNHTE
Trigger: CTCAGTATGGTTCCAGGCCCAGATCAAAGGTGCGGC...GGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCCTCTACTTGATGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000533024.5
CDS-3UTR CCA 90 bp ACATCCTCACCACCTCCCCCAAACCACAAGAAGTTCCTTAGATTCTGGCCAAGAGCCGCACCTTTGATCTaGGCCTGGAACCATACTGAG +
Preference number: 4 (lower is better)
Translates to: TSSPPPPNHKKFLRFWPRAAPLI*AWNHTE
Trigger: CTCAGTATGGTTCCAGGCCCAGATCAAAGGTGCGGC...TCTTGGCCAGAATCTAAGGAACTTCTTGTGGTTTGGGGGAGGTGGTGAGGATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR CCA 90 bp CTTACTTCTAAGCTACCCGGAGAGGAGGACCTGAATCTTCAGAAGACCAAGGACCAGCAGCCTTCGGCTTaGTTAAGCCAATGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LTSKLPGEEDLNLQKTKDQQPSA*LSQCPP
Trigger: AGGAGGGCATTGGCTTAACCAAGCCGAAGGCTGCTG...GTCCTTGGTCTTCTGAAGATTCAGGTCCTCCTCTCCGGGTAGCTTAGAAGTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp CAAACCAACCTCCTTACTTCTAAGCTACCCGGAGAGGAGGACCTGAATCTTCAGAAGGAAGATCTTAGCTaGGCTAGGCAGCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: QTNLLTSKLPGEEDLNLQKEDLS*ARQPSQ
Trigger: CTGGCTGGGCTGCCTAGCCCAGCTAAGATCTTCCTT...CTGAAGATTCAGGTCCTCCTCTCCGGGTAGCTTAGAAGTAAGGAGGTTGGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp CATGCCCAGAAGCACCGTTACTGTAGCCATCAGGTAGACCACCAGTCCACATGTAGGAGATGCAGTCCCTaGATCAAAATCACCGCAGGT +
Preference number: 4 (lower is better)
Translates to: HAQKHRYCSHQVDHQSTCRRCSP*IKITAG
Trigger: ACCTGCGGTGATTTTGATCCAGGGACTGCATCTCCT...ACATGTGGACTGGTGGTCTACCTGATGGCTACAGTAACGGTGCTTCTGGGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp ACCAAATCAGCACAAATTTCTGAAGGGCCTCAAGGGCAGAGCTGTCCCTCCAGGAGGAGATGCAGTCCCTaGATCAAAATCACCGCAGGT +
Preference number: 4 (lower is better)
Translates to: TKSAQISEGPQGQSCPSRRRCSP*IKITAG
Trigger: ACCTGCGGTGATTTTGATCCAGGGACTGCATCTCCT...CCTGGAGGGACAGCTCTGCCCTTGAGGCCCTTCAGAAATTTGTGCTGATTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp GAGCCAAGTGAATACCCCAGACATGAGCAGAATAAGGGAGGTGCGGGGAACAGAGGAATAGACATCAGATaGCACAGCCCACGCAAACTG +
Preference number: 4 (lower is better)
Translates to: EPSEYPRHEQNKGGAGNRGIDIR*HSPRKL
Trigger: CAGTTTGCGTGGGCTGTGCCATCTGATGTCTATTCC...TCTGTTCCCCGCACCTCCCTTATTCTGCTCATGTCTGGGGTATTCACTTGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp TCCTTAGATTCTGGCCAAGATGTGCAATTTTGTCTGCCATGCCTTGCAGCACTTGCCAGGAGAAAAGACTaGTTCCTGGCCGGGACAGCG +
Preference number: 4 (lower is better)
Translates to: SLDSGQDVQFCLPCLAALARRKD*FLAGTA
Trigger: CGCTGTCCCGGCCAGGAACCAGTCTTTTCTCCTGGC...AAGTGCTGCAAGGCATGGCAGACAAAATTGCACATCTTGGCCAGAATCTAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR TCA 90 bp CAAGTGAATACCCCAGACATGAGCAGAATAAGGGAGGTGCGGGGAACAGAGGATCTGTCAGAAAGATGGTaGAGCCCAAAGCTACCAGGT +
Preference number: 4 (lower is better)
Translates to: QVNTPDMSRIREVRGTEDLSERW*SPKLPG
Trigger: ACCTGGTAGCTTTGGGCTTCACCATCTTTCTGACAG...ATCCTCTGTTCCCCGCACCTCCCTTATTCTGCTCATGTCTGGGGTATTCACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp CCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTAAATAGATCCCTTTCAGATGGTAGAGCTTaGGGCGAGCCACCCTTGAGA +
Preference number: 4 (lower is better)
Translates to: PWTSQEVRKPDHFLNRSLSDGRA*GEPPLR
Trigger: TCTCAAGGGTGGCTCGCCTCAAGCTCTACCATCTGA...AAGGGATCTATTTAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR TCA 90 bp CAACAGAGCCTAAGAGGACCATATCCCATAAATAAGACCCATGGGCTCTCTCCAGGCCTGGAACCATACTaGGTACATGCCCAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: QQSLRGPYPINKTHGLSPGLEPY*VHAQKH
Trigger: GTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGCC...TGGAGAGAGCCCATGGGTCTTATTTATGGGATATGGTCCTCTTAGGCTCTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp CACAGGTACCAGGCCGCACCTTTGATCTGGGCCTGGAACCATACTGAGTACATGCACACAAGCAAGAAATaGCCACCAGCACATCACTAT +
Preference number: 4 (lower is better)
Translates to: HRYQAAPLIWAWNHTEYMHTSKK*PPAHHY
Trigger: ATAGTGATGTGCTGGTGGTCATTTCTTGCTTGTGTG...CATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGGTGCGGCCTGGTACCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000533024.5
CDS-3UTR TCA 90 bp CAACAGAGCCTAAGAGGACCATATCCCATAAATAAGACCCATGGGCTCTCTCCAGCTGGGAGAGTGTTCTaGGACATCGACCTGACAGAC +
Preference number: 4 (lower is better)
Translates to: QQSLRGPYPINKTHGLSPAGRVF*DIDLTD
Trigger: GTCTGTCAGGTCGATGTCTCAGAACACTCTCCCAGC...TGGAGAGAGCCCATGGGTCTTATTTATGGGATATGGTCCTCTTAGGCTCTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp TCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCGCAGGAACTCACATTTCCATTCAGAAGACCCTCACCTaGGTCCCTTCTTTCCACAGT +
Preference number: 4 (lower is better)
Translates to: SRQASHLDSAFAGTHISIQKTLT*VPSFHS
Trigger: ACTGTGGAAAGAAGGGACTCAGGTGAGGGTCTTCTG...AATGGAAATGTGAGTTCCTGCGAACGCTGAATCTAGGTGGGACGCTTGCCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp CTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATTTTGACCCACTGAATGATCCTGAGGTGGGCTaGAGGAAGATCTTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LHHLPLIPSTSPHFDPLNDPEVG*RKILAG
Trigger: CCCAGCTAAGATCTTCCTTCAGCCCACCTCAGGATC...ATTCAGTGGGTCAAAATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp TGTCTCTCATCAAGTAGAGGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCAGCTAAGGCAAGAACCTaGGCCCTAAGAAGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: CLSSSRGFRIRLSITFHSAKART*ALRRAK
Trigger: CTTTGCCCTTCTTAGGGCTCAGGTTCTTGCCTTAGC...TGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCCTCTACTTGATGAGAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp TGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCGCAGGAACTCACATTTCCTGTCAGGCCTTGCCATaGTCTAGGGAGATCCTATCT +
Preference number: 4 (lower is better)
Translates to: CSRQASHLDSAFAGTHISCQALP*SREILS
Trigger: AGATAGGATCTCCCTAGATCATGGCAAGGCCTGACA...GGAAATGTGAGTTCCTGCGAACGCTGAATCTAGGTGGGACGCTTGCCTTGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp GCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCAAGTAACCGTTTCTTCTaGGTTCACACCACACTGGAG +
Preference number: 4 (lower is better)
Translates to: ASGSGSPSPSTHTQYISPSNRFF*VHTTLE
Trigger: CTCCAGTGTGGTGTGAACTCAGAAGAAACGGTTACT...TGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp CAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATTTTCAAAATCACCGCAGGTaGAATTCTCCATGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: QDQALHHLPLIPSTSPHFQNHRR*NSPCSP
Trigger: GGGGCTGCATGGAGAATTTCACCTGCGGTGATTTTG...AAAATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp GGTTTCTGCAGTCCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTAAAAGGCAAAACAGGCTaGCCACTAGCAGCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: GFCSPWTSQEVRKPDHFLKGKTG*PLAAFP
Trigger: AGGGAAAGCTGCTAGTGGTCAGCCTGTTTTGCCTTT...TAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGGACTGCAGAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp TCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCGCAGGAACTCACATTTCCATTCTTAGGGAGGATGCCTaGATCTCCCACAGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: SRQASHLDSAFAGTHISILREDA*ISHSEV
Trigger: AACCTCACTGTGGGAGATTCAGGCATCCTCCCTAAG...AATGGAAATGTGAGTTCCTGCGAACGCTGAATCTAGGTGGGACGCTTGCCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310611.8
ENST00000430195.2
CDS-3UTR TCA 90 bp CCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTAAATAGATCCCTTAAGGTGAGGGCTGACTaGCTCAGCCTGCAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: PWTSQEVRKPDHFLNRSLKVRAD*LSLQVL
Trigger: AAGCACTTGCAGGCTGAGTCAGTCAGCCCTCACCTT...AAGGGATCTATTTAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR GCA 90 bp AAGGTGAGGCTGGAGGACTTCCCCAGATACAGAGCTGCTCCCATTCCATACCAAGCCATGAATACAGGGTaGCAGGAGAAAAGACCTCAA +
Preference number: 4 (lower is better)
Translates to: KVRLEDFPRYRAAPIPYQAMNTG*QEKRPQ
Trigger: TTGAGGTCTTTTCTCCTGGCACCCTGTATTCATGGC...TTGGTATGGAATGGGAGCAGCTCTGTATCTGGGGAAGTCCTCCAGCCTCACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310611.8
ENST00000430195.2
CDS-3UTR GCA 90 bp ACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTAAATAGATCCCTTATAGATAGGATGGCTAGGGTCTaGCCTGCCCAGTGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: TSQEVRKPDHFLNRSLIDRMARV*PAQWSR
Trigger: CCGGCTCCACTGGGCAGGGCAGACCCTAGCCATCCT...ATCTATAAGGGATCTATTTAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR GCA 90 bp AGTGATAGGGACGGAGTAAACCCATACTGCAGGTTTCCCAGCCCCCAAGCTGATACCATACTGAGTACATaGCCAGAAGCACCGTTACTG +
Preference number: 4 (lower is better)
Translates to: SDRDGVNPYCRFPSPQADTILST*PEAPLL
Trigger: CAGTAACGGTGCTTCTGGGCATGTACTCAGTATGGT...ATCAGCTTGGGGGCTGGGAAACCTGCAGTATGGGTTTACTCCGTCCCTATCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR GCA 90 bp GGAACCATGATGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCGCAGGAACACCATACTGAGTACATaGCCAGAAGCACCGTTACTG +
Preference number: 4 (lower is better)
Translates to: GTMMFKASVPPRFSVRRNTILST*PEAPLL
Trigger: CAGTAACGGTGCTTCTGGGCATGTACTCAGTATGGT...GTTCCTGCGAACGCTGAATCTAGGTGGGACGCTTGCCTTGAACATCATGGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR GCA 90 bp TGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCGCAGGAACTCACATTTCCGATCTGGAAATCTGGTaGATGATCACCAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: CSRQASHLDSAFAGTHISDLEIW*MITRAG
Trigger: TCCAGCCCTGGTGATCATGCACCAGATTTCCAGATC...GGAAATGTGAGTTCCTGCGAACGCTGAATCTAGGTGGGACGCTTGCCTTGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR GCA 90 bp TTGGTTTCTGCAGTCCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTGATCTGGAAATCTGGTaGATGATCACCAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: LVSAVPGPAKKCENLTTSDLEIW*MITRAG
Trigger: TCCAGCCCTGGTGATCATGCACCAGATTTCCAGATC...AGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGGACTGCAGAAACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR GCA 90 bp CACCGTTACTGTAGCCATCAGGTAGACCACCAGTCCACATGTCAGATGGTAGAGGGACCAGCCAAGAAGTaGGAAAACCTGACCACTTCT +
Preference number: 4 (lower is better)
Translates to: HRYCSHQVDHQSTCQMVEGPAKK*ENLTTS
Trigger: AGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCC...CTCTACCATCTGACATGTGGACTGGTGGTCTACCTGATGGCTACAGTAACGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR GCA 90 bp CTCTCATCAAGTAGAGGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACAGCAGCTTTGGTTTCTaGAGTCCCTGGACCAGCCAA +
Preference number: 4 (lower is better)
Translates to: LSSSRGFRIRLSITFHSYSSFGF*SPWTSQ
Trigger: TTGGCTGGTCCAGGGACTGCAGAAACCAAAGCTGCT...GTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCCTCTACTTGATGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000533024.5
CDS-3UTR GCA 90 bp CCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTAAATAGATCCCTTGGATCAGAAAAGCCCTaGCCCACTTCCTTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: PWTSQEVRKPDHFLNRSLGSEKP*PTSLAL
Trigger: AAGGGCCAAGGAAGTGGGGCAGGGCTTTTCTGATCC...AAGGGATCTATTTAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp ATGCCTGAATCTCCCACAGTGAGGTTTTCAAAACAAGACCTGGCTAGGCACGGTTGGAGAGGACACTTCTaGCCTTGCTGTCCCCATTCT +
Preference number: 4 (lower is better)
Translates to: MPESPTVRFSKQDLARHGWRGHF*PCCPHS
Trigger: AGAATGGGGACAGCAAGGGCAGAAGTGTCCTCTCCA...ACCGTGCCTAGCCAGGTCTTGTTTTGAAAACCTCACTGTGGGAGATTCAGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR GCA 90 bp TTTGGTTTCTGCAGTCCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCGGGGCCTCCTTTAGATaGTTGTCCTGGAGATGCAAT +
Preference number: 4 (lower is better)
Translates to: FGFCSPWTSQEVRKPDHFGASFR*LSWRCN
Trigger: ATTGCATCTCCAGGACAAGCATCTAAAGGAGGCCCC...GAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGGACTGCAGAAACCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp CAACAGAGCCTAAGAGGACCATATCCCATAAATAAGACCCATGGGCTCTCTCCAGGAACAATACCCCTCTaGACAGCAGGGGCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: QQSLRGPYPINKTHGLSPGTIPL*TAGASF
Trigger: AAAGGAGGCCCCTGCTGTGCAGAGGGGTATTGTTCC...TGGAGAGAGCCCATGGGTCTTATTTATGGGATATGGTCCTCTTAGGCTCTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp CACCGTTACTGTAGCCATCAGGTAGACCACCAGTCCACATGTCAGATGGTAGAGCAGGCTTTACGGCATTaGCTGCTTGCTCTTAGAGCA +
Preference number: 4 (lower is better)
Translates to: HRYCSHQVDHQSTCQMVEQALRH*LLALRA
Trigger: TGCTCTAAGAGCAAGCAGGCAATGCCGTAAAGCCTG...CTCTACCATCTGACATGTGGACTGGTGGTCTACCTGATGGCTACAGTAACGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp ATCACCAAAGGAACCATGATGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCTCCTCCAAGGCGTTTaGTTCCTTGCTGAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: ITKGTMMFKASVPPRFSVLLQGV*FLAEEP
Trigger: TGGCTCCTCAGCAAGGAAGCAAACGCCTTGGAGGAG...AACGCTGAATCTAGGTGGGACGCTTGCCTTGAACATCATGGTTCCTTTGGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp TTCTGCAGTCCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTAAATCTCCTCCAAGGCGTTTaGTTCCTTGCTGAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: FCSPWTSQEVRKPDHFLNLLQGV*FLAEEP
Trigger: TGGCTCCTCAGCAAGGAAGCAAACGCCTTGGAGGAG...ATTTAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGGACTGCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp GAACAATACCCCTCTGCACAGCAGGGGCCTCCTTTAGATGCTTGTCCTGGAGATAAAAGGGCAACCATGTaGTTCTCCTCCAAGGCGTTT +
Preference number: 4 (lower is better)
Translates to: EQYPSAQQGPPLDACPGDKRATM*FSSKAF
Trigger: AAACGCCTTGGAGGAGAAGCACATGGTTGCCCTTTT...ATCTCCAGGACAAGCATCTAAAGGAGGCCCCTGCTGTGCAGAGGGGTATTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp AAACCTGACCACTTCTTAAATAGATCCCTTATAGATCACCAAAGGAACCATGATAAGACCTCCAGGGGCTaGATGGCCGTGGCCCGCGGG +
Preference number: 4 (lower is better)
Translates to: KPDHFLNRSLIDHQRNHDKTSRG*MAVARG
Trigger: CCCGCGGGCCACGGCCATGCAGCCCCTGGAGGTCTT...ATCATGGTTCCTTTGGTGATCTATAAGGGATCTATTTAAGAAGTGGTCAGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533024.5
CDS-3UTR GCA 90 bp CACCGTTACTGTAGCCATCAGGTAGACCACCAGTCCACATGTCAGATGGTAGAGGCCATGAATACAGGGTaGCAGGAGAAAAGACCTCCA +
Preference number: 4 (lower is better)
Translates to: HRYCSHQVDHQSTCQMVEAMNTG*QEKRPP
Trigger: TGGAGGTCTTTTCTCCTGGCACCCTGTATTCATGGC...CTCTACCATCTGACATGTGGACTGGTGGTCTACCTGATGGCTACAGTAACGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533024.5
CDS-3UTR CCA 90 bp CCCAGTACATCTCCCCATTTTGACCCACTGAATTATTCCTCAACAATAGCAGCTGTCTGCCCTGCCCAGTaGAGCCGGATCCGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: PSTSPHFDPLNYSSTIAAVCPAQ*SRIRAF
Trigger: AAAAGCACGGATCCGGCTCCACTGGGCAGGGCAGAC...AGCTGCTATTGTTGAGGAATAATTCAGTGGGTCAAAATGGGGAGATGTACTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR CCA 90 bp GCACCTTTGATCTGGGCCTGGAACCATACTGAGTACATGCCCAGAAGCACCGTTCCTTTGATCTGGGCCTaGAACCATACTGAGTACATG +
Preference number: 4 (lower is better)
Translates to: APLIWAWNHTEYMPRSTVPLIWA*NHTEYM
Trigger: CATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGG...AACGGTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR CCA 90 bp CTGTTTTGGCCTGTGCCAAGCCCAAGGAAGTCCATGGCTGCATCTCTTCAACACCCTTTGATCTGGGCCTaGAACCATACTGAGTACATG +
Preference number: 4 (lower is better)
Translates to: LFWPVPSPRKSMAASLQHPLIWA*NHTEYM
Trigger: CATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGG...GTGTTGAAGAGATGCAGCCATGGACTTCCTTGGGCTTGGCACAGGCCAAAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR CCA 90 bp AGGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCCTTTGATCTGGGCCTaGAACCATACTGAGTACATG +
Preference number: 4 (lower is better)
Translates to: RLQDQALHHLPLIPSTSPPLIWA*NHTEYM
Trigger: CATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGG...GGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000533024.5
CDS-3UTR CCA 90 bp GGGCATAATGAGTTACGTGGAGAGGACACTTCTGCCCTTGCTGTCCCCATTCTGCTTGGACCAAAGAGCTaGGAAGAGATGACAACTGAG +
Preference number: 4 (lower is better)
Translates to: GHNELRGEDTSALAVPILLGPKS*EEMTTE
Trigger: CTCAGTTGTCATCTCTTCCCAGCTCTTTGGTCCAAG...CAGAATGGGGACAGCAAGGGCAGAAGTGTCCTCTCCACGTAACTCATTATGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp CCCAGTACATCTCCCCATTTTGACCCACTGAATTATTCCTCAACAATAGCAGCTCCACCGAGGGCAGCCTaGGGAACTACTTTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PSTSPHFDPLNYSSTIAAPPRAA*GTTFSC
Trigger: GCAGCTGAAAGTAGTTCCCCAGGCTGCCCTCGGTGG...AGCTGCTATTGTTGAGGAATAATTCAGTGGGTCAAAATGGGGAGATGTACTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp ATCACCAAAGGAACCATGATGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTTCAGCAGCACTTTCCTaGCTCAGCTGTTGTCAGGCC +
Preference number: 4 (lower is better)
Translates to: ITKGTMMFKASVPPRFSVSAALS*LSCCQA
Trigger: GGCCTGACAACAGCTGAGCCAGGAAAGTGCTGCTGA...AACGCTGAATCTAGGTGGGACGCTTGCCTTGAACATCATGGTTCCTTTGGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp TCTAAGCTACCCGGAGAGGAGGACCTGAATCTTCAGAAGACCAAGGACATCCACAGGAGATGCAGTCCCTaGATCAAAATCACCGCAGGT +
Preference number: 4 (lower is better)
Translates to: SKLPGEEDLNLQKTKDIHRRCSP*IKITAG
Trigger: ACCTGCGGTGATTTTGATCCAGGGACTGCATCTCCT...GTGGATGTCCTTGGTCTTCTGAAGATTCAGGTCCTCCTCTCCGGGTAGCTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp CTTGGACCAAAGAGCTGGGAAGAGATGACAACTGAGGAAAGCTTAGATAACAAGGCGGGGAACAGAGGATaGCGGAGGAGGGAACACACA +
Preference number: 4 (lower is better)
Translates to: LGPKSWEEMTTEESLDNKAGNRG*RRREHT
Trigger: TGTGTGTTCCCTCCTCCGCCATCCTCTGTTCCCCGC...CTTGTTATCTAAGCTTTCCTCAGTTGTCATCTCTTCCCAGCTCTTTGGTCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp TTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATTGAAGGGCAGGAGTACTaGAAGTTCAGGCTCAACAGC +
Preference number: 4 (lower is better)
Translates to: FRIRLSITFHSYPVHLPIEGQEY*KFRLNS
Trigger: GCTGTTGAGCCTGAACTTCCAGTACTCCTGCCCTTC...AATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR CCA 90 bp AGGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCAGTAAGCCTCATGTCTaGCTTGGAGGCCTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: RLQDQALHHLPLIPSTSPSKPHV*LGGLRK
Trigger: TTTTCTCAGGCCTCCAAGCCAGACATGAGGCTTACT...GGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp CAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATTTTCTGTCAGAAAGATGGTaGAGCCCAAAGCTACCAGGT +
Preference number: 4 (lower is better)
Translates to: QDQALHHLPLIPSTSPHFLSERW*SPKLPG
Trigger: ACCTGGTAGCTTTGGGCTTCACCATCTTTCTGACAG...AAAATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp CTCTCATCAAGTAGAGGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCTGTCAGAAAGATGGTaGAGCCCAAAGCTACCAGGT +
Preference number: 4 (lower is better)
Translates to: LSSSRGFRIRLSITFHSYLSERW*SPKLPG
Trigger: ACCTGGTAGCTTTGGGCTTCACCATCTTTCTGACAG...GTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCCTCTACTTGATGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp AAGTCTGATGAGGACTACTTGGAGTTTGGAGTTCTCTCTTCTGTTTTGGCCTGTACCAGGCCGCACCTTTaGTCTGGGCCTGGAACCATA +
Preference number: 4 (lower is better)
Translates to: KSDEDYLEFGVLSSVLACTRPHL*SGPGTI
Trigger: TATGGTTCCAGGCCCAGATCAAAGGTGCGGCCTGGT...ACAGGCCAAAACAGAAGAGAGAACTCCAAACTCCAAGTAGTCCTCATCAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR TCA 90 bp ATGCCTGAATCTCCCACAGTGAGGTTTTCAAAACAAGACCTGGCTAGGCACGGTTGGAAATCTGGTGCATaGTCACCAGGGCTGGATAGA +
Preference number: 4 (lower is better)
Translates to: MPESPTVRFSKQDLARHGWKSGA*SPGLDR
Trigger: TCTATCCAGCCCTGGTGATCATGCACCAGATTTCCA...ACCGTGCCTAGCCAGGTCTTGTTTTGAAAACCTCACTGTGGGAGATTCAGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR TCA 90 bp CCAAGTGAATACCCCAGACATGAGCAGAATAAGGGAGGTGCGGGGAACAGAGGACACACAAGCAAGAAATaGCCACCAGCACATCACTAT +
Preference number: 4 (lower is better)
Translates to: PSEYPRHEQNKGGAGNRGHTSKK*PPAHHY
Trigger: ATAGTGATGTGCTGGTGGTCATTTCTTGCTTGTGTG...TCCTCTGTTCCCCGCACCTCCCTTATTCTGCTCATGTCTGGGGTATTCACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp GAGCCAAGTGAATACCCCAGACATGAGCAGAATAAGGGAGGTGCGGGGAACAGATCTGAGACATCGACCTaGCAGACGCTGTATATTAGA +
Preference number: 4 (lower is better)
Translates to: EPSEYPRHEQNKGGAGNRSETST*QTLYIR
Trigger: TCTAATATACAGCGTCTGTCAGGTCGATGTCTCAGA...TCTGTTCCCCGCACCTCCCTTATTCTGCTCATGTCTGGGGTATTCACTTGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp CTTACTTCTAAGCTACCCGGAGAGGAGGACCTGAATCTTCAGAAGACCAAGGACATCAGCACAAATTTCTaGAGGGCCTCAAGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LTSKLPGEEDLNLQKTKDISTNF*RASRAE
Trigger: CTCTGCCCTTGAGGCCCTTCAGAAATTTGTGCTGAT...GTCCTTGGTCTTCTGAAGATTCAGGTCCTCCTCTCCGGGTAGCTTAGAAGTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp CTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATTTTGACCCACTGAATTCCTATCTTCTCAACTaGGCCCAGACCACAGCTCAG +
Preference number: 4 (lower is better)
Translates to: LHHLPLIPSTSPHFDPLNSYLLN*AQTTAQ
Trigger: CTGAGCTGTGGTCTGGGCTCAGTTGAGAAGATAGGA...ATTCAGTGGGTCAAAATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp CAAGTGAATACCCCAGACATGAGCAGAATAAGGGAGGTGCGGGGAACAGAGGATAGTAACCGTTTCTTCTaGGTTCACACCACACTGGAG +
Preference number: 4 (lower is better)
Translates to: QVNTPDMSRIREVRGTEDSNRFF*VHTTLE
Trigger: CTCCAGTGTGGTGTGAACTCAGAAGAAACGGTTACT...ATCCTCTGTTCCCCGCACCTCCCTTATTCTGCTCATGTCTGGGGTATTCACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp AAGGTGAGGCTGGAGGACTTCCCCAGATACAGAGCTGCTCCCATTCCATACCAACTGAATCTCCCACAGTaGGGTTTTCAAAACAAGACC +
Preference number: 4 (lower is better)
Translates to: KVRLEDFPRYRAAPIPYQLNLPQ*GFQNKT
Trigger: GGTCTTGTTTTGAAAACCTCACTGTGGGAGATTCAG...TTGGTATGGAATGGGAGCAGCTCTGTATCTGGGGAAGTCCTCCAGCCTCACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR TCA 90 bp AAGGTGAGGCTGGAGGACTTCCCCAGATACAGAGCTGCTCCCATTCCATACCAAGTCTTATTAGTTTACTaGGAGGACTCAGTGCCCACT +
Preference number: 4 (lower is better)
Translates to: KVRLEDFPRYRAAPIPYQVLLVY*EDSVPT
Trigger: AGTGGGCACTGAGTCCTCTCAGTAAACTAATAAGAC...TTGGTATGGAATGGGAGCAGCTCTGTATCTGGGGAAGTCCTCCAGCCTCACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR TCA 90 bp CAGGAACTCACATTTCCATTTTCTTCCTCGGCAAGTAGGATCTGGAAATCTGGTCATCCGCCAAGGCCATaGATACAGGGTGCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: QELTFPFSSSASRIWKSGHPPRP*IQGARR
Trigger: TCTCCTGGCACCCTGTATTCATGGCCTTGGCGGATG...ACCAGATTTCCAGATCCTACTTGCCGAGGAAGAAAATGGAAATGTGAGTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp CTATTTGGAAAGTTGTTTTTCACTTCAGGAGGAACAACCAAGGTGACGAGGGGTCCCAAAGCTACCAGGTaGGCCAAGATCCCACTGCCT +
Preference number: 4 (lower is better)
Translates to: LFGKLFFTSGGTTKVTRGPKATR*AKIPLP
Trigger: AGGCAGTGGGATCTTGGCGCACCTGGTAGCTTTGGG...ACCCCTCGTCACCTTGGTTGTTCCTCCTGAAGTGAAAAACAACTTTCCAAATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR GCA 90 bp CACATCACTATCACCACCCAAAACTCTGTCTCTCATCAAGTAGAGGCTTCAGGAGTGGAGCCGGATCCGTaGTTTTCGGGAGCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: HITITTQNSVSHQVEASGVEPDP*FSGAEE
Trigger: TTCTTCTGCTCCCGAAAAGCACGGATCCGGCTCCAC...TCCTGAAGCCTCTACTTGATGAGAGACAGAGTTTTGGGTGGTGATAGTGATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000533024.5
CDS-3UTR GCA 90 bp CCTGACCACTTCTTAAATAGATCCCTTATAGATCACCAAAGGAACCATGATGTTAGGATGGCTAGGGTCTaGCCTGCCCAGTGGAGCCGG +
Preference number: 4 (lower is better)
Translates to: PDHFLNRSLIDHQRNHDVRMARV*PAQWSR
Trigger: CCGGCTCCACTGGGCAGGGCAGACCCTAGCCATCCT...AACATCATGGTTCCTTTGGTGATCTATAAGGGATCTATTTAAGAAGTGGTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR GCA 90 bp GGTTTCTGCAGTCCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTAACCATACTGAGTACATaGCCAGAAGCACCGTTACTG +
Preference number: 4 (lower is better)
Translates to: GFCSPWTSQEVRKPDHFLTILST*PEAPLL
Trigger: CAGTAACGGTGCTTCTGGGCATGTACTCAGTATGGT...TAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGGACTGCAGAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR GCA 90 bp GTACCTAAGGTTGTACAACAGAGCCTAAGAGGACCATATCCCATAAATAAGACCTGGATAGACGGGCAGTaGCAGGCACAGGTACCAGGC +
Preference number: 4 (lower is better)
Translates to: VPKVVQQSLRGPYPINKTWIDGQ*QAQVPG
Trigger: GCCTGGTACCTGTGCCTGGCACTGCCCGTCTATCCA...GGTCTTATTTATGGGATATGGTCCTCTTAGGCTCTGTTGTACAACCTTAGGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp TTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATTGGACCAGCCAAGAAGTaGGAAAACCTGACCACTTCT +
Preference number: 4 (lower is better)
Translates to: FRIRLSITFHSYPVHLPIGPAKK*ENLTTS
Trigger: AGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCC...AATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000533024.5
CDS-3UTR GCA 90 bp TTCTGCAGTCCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTAAATAGCAGCTTTGGTTTCTaGAGTCCCTGGACCAGCCAA +
Preference number: 4 (lower is better)
Translates to: FCSPWTSQEVRKPDHFLNSSFGF*SPWTSQ
Trigger: TTGGCTGGTCCAGGGACTGCAGAAACCAAAGCTGCT...ATTTAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGGACTGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR GCA 90 bp TGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCGCAGGAACTCACATTTCCCTTTACGGCATTGCCTaGTTGCTCTTAGAGCAAGCT +
Preference number: 4 (lower is better)
Translates to: CSRQASHLDSAFAGTHISLYGIA*LLLEQA
Trigger: AGCTTGCTCTAAGAGCAAGCAGGCAATGCCGTAAAG...GGAAATGTGAGTTCCTGCGAACGCTGAATCTAGGTGGGACGCTTGCCTTGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp TGTCTCTCATCAAGTAGAGGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCACAGGCTTTACGGCATTaGCTGCTTGCTCTTAGAGCA +
Preference number: 4 (lower is better)
Translates to: CLSSSRGFRIRLSITFHSQALRH*LLALRA
Trigger: TGCTCTAAGAGCAAGCAGGCAATGCCGTAAAGCCTG...TGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCCTCTACTTGATGAGAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp AGCCAAGAAGTGCGAAAACCTGACCACTTCTTAAATAGATCCCTTATAGATCACCCTGCCCTCCAGGCCTaGTGGTCAGAAAGGCGACAG +
Preference number: 4 (lower is better)
Translates to: SQEVRKPDHFLNRSLIDHPALQA*WSERRQ
Trigger: CTGTCGCCTTTCTGACCAGCAGGCCTGGAGGGCAGG...GTGATCTATAAGGGATCTATTTAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp GTCTCTCATCAAGTAGAGGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCTATTCCCTACACTaGAGTCAGACCAGGCTAAGC +
Preference number: 4 (lower is better)
Translates to: VSHQVEASGSGSPSPSTHTYSLH*SQTRLS
Trigger: GCTTAGCCTGGTCTGACTGCAGTGTAGGGAATAGGT...ATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCCTCTACTTGATGAGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp ATCACCAAAGGAACCATGATGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCCCCAGATACAGAGCTaGTCCCATTCCATACCAACC +
Preference number: 4 (lower is better)
Translates to: ITKGTMMFKASVPPRFSVPQIQS*SHSIPT
Trigger: GGTTGGTATGGAATGGGAGCAGCTCTGTATCTGGGG...AACGCTGAATCTAGGTGGGACGCTTGCCTTGAACATCATGGTTCCTTTGGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR GCA 90 bp TTCTGCAGTCCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTAAATGGATGGCTTCAGCCATaGAGAGGCAGAACTCAAGTG +
Preference number: 4 (lower is better)
Translates to: FCSPWTSQEVRKPDHFLNGWLQP*RGRTQV
Trigger: CACTTGAGTTCTGCCTCTGCATGGCTGAAGCCATCC...ATTTAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGGACTGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369868.7
CDS-3UTR GCA 90 bp CAAGTGAATACCCCAGACATGAGCAGAATAAGGGAGGTGCGGGGAACAGAGGATGCCATGAATACAGGGTaGCAGGAGAAAAGACTGGTT +
Preference number: 4 (lower is better)
Translates to: QVNTPDMSRIREVRGTEDAMNTG*QEKRLV
Trigger: AACCAGTCTTTTCTCCTGGCACCCTGTATTCATGGC...ATCCTCTGTTCCCCGCACCTCCCTTATTCTGCTCATGTCTGGGGTATTCACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000420578.7
ENST00000496961.5
CDS-3UTR GCA 90 bp ATGGCTGACAATTTGGCTGACAGGATGAAGCTGATAAGGAGAGCAAGTCTGATGTTGTCTGCCATGCCTTaGAGCACTTACCCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: MADNLADRMKLIRRASLMLSAMP*STYPGS
Trigger: GGAGCCAGGGTAAGTGCTGCAAGGCATGGCAGACAA...CATCAGACTTGCTCTCCTTATCAGCTTCATCCTGTCAGCCAAATTGTCAGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR CCA 90 bp GTACCTAAGGTTGTACAACAGAGCCTAAGAGGACCATATCCCATAAATAAGACCGTCTGCCCTGCCCAGTaGAGCCGGATCCGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: VPKVVQQSLRGPYPINKTVCPAQ*SRIRAF
Trigger: AAAAGCACGGATCCGGCTCCACTGGGCAGGGCAGAC...GGTCTTATTTATGGGATATGGTCCTCTTAGGCTCTGTTGTACAACCTTAGGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp GTGCGAAAACCTGACCACTTCTTAAATAGATCCCTTATAGATCACCAAAGGAACGAGCTGCACAGAGGATaGCTAGGGTCTGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: VRKPDHFLNRSLIDHQRNELHRG*LGSALP
Trigger: GGGCAGGGCAGACCCTAGCCATCCTCTGTGCAGCTC...GTTCCTTTGGTGATCTATAAGGGATCTATTTAAGAAGTGGTCAGGTTTTCGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR CCA 90 bp ATACCCAGTACATCTCCCCATTTTGACCCACTGAATTATTCCTCAACAATAGCACCACCCTTGAGACCCTaGCTGCCCGGGGACAAAGGA +
Preference number: 4 (lower is better)
Translates to: IPSTSPHFDPLNYSSTIAPPLRP*LPGDKG
Trigger: TCCTTTGTCCCCGGGCAGCCAGGGTCTCAAGGGTGG...TGCTATTGTTGAGGAATAATTCAGTGGGTCAAAATGGGGAGATGTACTGGGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR CCA 90 bp CACCGTTACTGTAGCCATCAGGTAGACCACCAGTCCACATGTCAGATGGTAGAGCCTTTGATCTGGGCCTaGAACCATACTGAGTACATG +
Preference number: 4 (lower is better)
Translates to: HRYCSHQVDHQSTCQMVEPLIWA*NHTEYM
Trigger: CATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGG...CTCTACCATCTGACATGTGGACTGGTGGTCTACCTGATGGCTACAGTAACGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR CCA 90 bp CAGGAACTCACATTTCCATTTTCTTCCTCGGCAAGTAGGATCTGGAAATCTGGTCATGATCACCAGGGCTaGATAGACGGGCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: QELTFPFSSSASRIWKSGHDHQG*IDGQCQ
Trigger: CTGGCACTGCCCGTCTATCCAGCCCTGGTGATCATG...ACCAGATTTCCAGATCCTACTTGCCGAGGAAGAAAATGGAAATGTGAGTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR CCA 90 bp CCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTAAATAGATCCCTTCACGTGGTCCACAGCTaGGAGAGTGTTCTGAGACAT +
Preference number: 4 (lower is better)
Translates to: PWTSQEVRKPDHFLNRSLHVVHS*ESVLRH
Trigger: ATGTCTCAGAACACTCTCCCAGCTGTGGACCACGTG...AAGGGATCTATTTAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp CCCAGTACATCTCCCCATTTTGACCCACTGAATTATTCCTCAACAATAGCAGCTCCCTCATTTGCCAGCTaGCACCAAACTCAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: PSTSPHFDPLNYSSTIAAPSFAS*HQTQPP
Trigger: AGGGGGCTGAGTTTGGTGCCAGCTGGCAAATGAGGG...AGCTGCTATTGTTGAGGAATAATTCAGTGGGTCAAAATGGGGAGATGTACTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp GTGCGAAAACCTGACCACTTCTTAAATAGATCCCTTATAGATCACCAAAGGAACGAGCGGGGTGGTCTCTaGAGGGAAGAGAGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: VRKPDHFLNRSLIDHQRNERGGL*REESPA
Trigger: GGCTGGACTCTCTTCCCTCCAGAGACCACCCCGCTC...GTTCCTTTGGTGATCTATAAGGGATCTATTTAAGAAGTGGTCAGGTTTTCGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp CACCGTTACTGTAGCCATCAGGTAGACCACCAGTCCACATGTCAGATGGTAGAGTTTAGATGCTTGTCCTaGAGATGCAATCTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: HRYCSHQVDHQSTCQMVEFRCLS*RCNLPQ
Trigger: CTGGGGGAGATTGCATCTCCAGGACAAGCATCTAAA...CTCTACCATCTGACATGTGGACTGGTGGTCTACCTGATGGCTACAGTAACGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp CTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATTTTGACCCACTGAATATGAGAAAGAAGGGATaGGCCAGTGAGTGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: LHHLPLIPSTSPHFDPLNMRKKG*ASECGR
Trigger: CCTTCCGCACTCACTGGCCCATCCCTTCTTTCTCAT...ATTCAGTGGGTCAAAATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR CCA 90 bp CAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATTTTTTTCAAAACAAGACCTaGCTAGGCACGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: QDQALHHLPLIPSTSPHFFQNKT*LGTVAH
Trigger: GTGAGCCACCGTGCCTAGCCAGGTCTTGTTTTGAAA...AAAATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTG
50% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR CCA 90 bp TCTAAGCTACCCGGAGAGGAGGACCTGAATCTTCAGAAGACCAAGGACATCCACAGTAAGCCTCATGTCTaGCTTGGAGGCCTGAGAAAA +
Preference number: 4 (lower is better)
Translates to: SKLPGEEDLNLQKTKDIHSKPHV*LGGLRK
Trigger: TTTTCTCAGGCCTCCAAGCCAGACATGAGGCTTACT...GTGGATGTCCTTGGTCTTCTGAAGATTCAGGTCCTCCTCTCCGGGTAGCTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp GAATACTTACCTAAAGTCTTGACCGAAGGGCAGCCCTCCTCTATTTGGAAAGTTAGAACGCCAAGGCCATaGATACAGGGTGCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: EYLPKVLTEGQPSSIWKVRTPRP*IQGARR
Trigger: TCTCCTGGCACCCTGTATTCATGGCCTTGGCGTTCT...AACTTTCCAAATAGAGGAGGGCTGCCCTTCGGTCAAGACTTTAGGTAAGTATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR TCA 90 bp CCCAGTACATCTCCCCATTTTGACCCACTGAATTATTCCTCAACAATAGCAGCTTCAGATGGTAGAGCTTaGGGCGAGCCACCCTTGAGA +
Preference number: 4 (lower is better)
Translates to: PSTSPHFDPLNYSSTIAASDGRA*GEPPLR
Trigger: TCTCAAGGGTGGCTCGCCTCAAGCTCTACCATCTGA...AGCTGCTATTGTTGAGGAATAATTCAGTGGGTCAAAATGGGGAGATGTACTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR TCA 90 bp CATTTCCATTTTCTTCCTCGGCAAGTAGGATCTGGAAATCTGGTGCATGATCACTCAGATGGTAGAGCTTaGGGCGAGCCACCCTTGAGA +
Preference number: 4 (lower is better)
Translates to: HFHFLPRQVGSGNLVHDHSDGRA*GEPPLR
Trigger: TCTCAAGGGTGGCTCGCCTCAAGCTCTACCATCTGA...GTGATCATGCACCAGATTTCCAGATCCTACTTGCCGAGGAAGAAAATGGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR TCA 90 bp CTCCCCCAAACCACAAGAAGTTCCTTAGATTCTGGCCAAGATGTGCAATTTTGTTCAGATGGTAGAGCTTaGGGCGAGCCACCCTTGAGA +
Preference number: 4 (lower is better)
Translates to: LPQTTRSSLDSGQDVQFCSDGRA*GEPPLR
Trigger: TCTCAAGGGTGGCTCGCCTCAAGCTCTACCATCTGA...ACAAAATTGCACATCTTGGCCAGAATCTAAGGAACTTCTTGTGGTTTGGGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR TCA 90 bp TTCTGCAGTCCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTAAATTGGAAATCTGGTGCATaGTCACCAGGGCTGGATAGA +
Preference number: 4 (lower is better)
Translates to: FCSPWTSQEVRKPDHFLNWKSGA*SPGLDR
Trigger: TCTATCCAGCCCTGGTGATCATGCACCAGATTTCCA...ATTTAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGGACTGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR TCA 90 bp CTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATTCTGAGACATCGACCTaGCAGACGCTGTATATTAGA +
Preference number: 4 (lower is better)
Translates to: LQDQALHHLPLIPSTSPHSETST*QTLYIR
Trigger: TCTAATATACAGCGTCTGTCAGGTCGATGTCTCAGA...ATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp CACATCACTATCACCACCCAAAACTCTGTCTCTCATCAAGTAGAGGCTTCAGGAAAGAAGGGCAAAGCATaGGATGCCTGGGGCTCCTTT +
Preference number: 4 (lower is better)
Translates to: HITITTQNSVSHQVEASGKKGKA*DAWGSF
Trigger: AAAGGAGCCCCAGGCATCTCATGCTTTGCCCTTCTT...TCCTGAAGCCTCTACTTGATGAGAGACAGAGTTTTGGGTGGTGATAGTGATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp CAGGAACTCACATTTCCATTTTCTTCCTCGGCAAGTAGGATCTGGAAATCTGGTTCCCAGAGTTCCCTGTaGGCTATGTCGACTTGCCTC +
Preference number: 4 (lower is better)
Translates to: QELTFPFSSSASRIWKSGSQSSL*AMSTCL
Trigger: GAGGCAAGTCGACATAGCTCACAGGGAACTCTGGGA...ACCAGATTTCCAGATCCTACTTGCCGAGGAAGAAAATGGAAATGTGAGTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp GAGGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCTGTCCCCATACTATTaGATCAAACCAACCTCCTTA +
Preference number: 4 (lower is better)
Translates to: EASGSGSPSPSTHTQYISLSPYY*IKPTSL
Trigger: TAAGGAGGTTGGTTTGATTCAATAGTATGGGGACAG...GGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp TTGGTTTCTGCAGTCCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTGTCTTATTAGTTTACTaGGAGGACTCAGTGCCCACT +
Preference number: 4 (lower is better)
Translates to: LVSAVPGPAKKCENLTTSVLLVY*EDSVPT
Trigger: AGTGGGCACTGAGTCCTCTCAGTAAACTAATAAGAC...AGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGGACTGCAGAAACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR TCA 90 bp GGCATAATGAGTTACGTGGAGAGGACACTTCTGCCCTTGCTGTCCCCATTCTGTGTTCCCTACATATCTTaGCCTTTGTCAGGTGCAAGT +
Preference number: 4 (lower is better)
Translates to: GIMSYVERTLLPLLSPFCVPYIS*PLSGAS
Trigger: ACTTGCACCTGACAAAGGTCAAGATATGTAGGGAAC...ACAGAATGGGGACAGCAAGGGCAGAAGTGTCCTCTCCACGTAACTCATTATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR TCA 90 bp TCCTTAGATTCTGGCCAAGATGTGCAATTTTGTCTGCCATGCCTTGCAGCACTTACTTACCTAAAGTCTTaGCCGAAGGGCAGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: SLDSGQDVQFCLPCLAALTYLKS*PKGSPP
Trigger: AGGAGGGCTGCCCTTCGGTCAAGACTTTAGGTAAGT...AAGTGCTGCAAGGCATGGCAGACAAAATTGCACATCTTGGCCAGAATCTAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR GCA 90 bp ATACCCAGTACATCTCCCCATTTTGACCCACTGAATTATTCCTCAACAATAGCATGGATAGACGGGCAGTaGCAGGCACAGGTACCAGGC +
Preference number: 4 (lower is better)
Translates to: IPSTSPHFDPLNYSSTIAWIDGQ*QAQVPG
Trigger: GCCTGGTACCTGTGCCTGGCACTGCCCGTCTATCCA...TGCTATTGTTGAGGAATAATTCAGTGGGTCAAAATGGGGAGATGTACTGGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR GCA 90 bp ATCACCAAAGGAACCATGATGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTGATCTGGAAATCTGGTaGATGATCACCAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: ITKGTMMFKASVPPRFSVDLEIW*MITRAG
Trigger: TCCAGCCCTGGTGATCATGCACCAGATTTCCAGATC...AACGCTGAATCTAGGTGGGACGCTTGCCTTGAACATCATGGTTCCTTTGGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR GCA 90 bp GTGCGAAAACCTGACCACTTCTTAAATAGATCCCTTATAGATCACCAAAGGAACAGGAACACCTGCCCCTaGTCCTGGGAACTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: VRKPDHFLNRSLIDHQRNRNTCP*SWELEL
Trigger: GAGCTCCAGTTCCCAGGAGCAGGGGCAGGTGTTCCT...GTTCCTTTGGTGATCTATAAGGGATCTATTTAAGAAGTGGTCAGGTTTTCGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp TGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTAAATAGATCCCTTATATGCTTGTCCTGGAGATaGAATCTCCCCCAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: WTSQEVRKPDHFLNRSLICLSWR*NLPQEG
Trigger: CCCCTCCTGGGGGAGATTGCATCTCCAGGACAAGCA...TATAAGGGATCTATTTAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp CAGAGCCTAAGAGGACCATATCCCATAAATAAGACCCATGGGCTCTCTCCACTAGGGGCCTCCTTTAGATaGTTGTCCTGGAGATGCAAT +
Preference number: 4 (lower is better)
Translates to: QSLRGPYPINKTHGLSPLGASFR*LSWRCN
Trigger: ATTGCATCTCCAGGACAAGCATCTAAAGGAGGCCCC...TAGTGGAGAGAGCCCATGGGTCTTATTTATGGGATATGGTCCTCTTAGGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp TGTCTCTCATCAAGTAGAGGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCACTTTACGGCATTGCCTaGTTGCTCTTAGAGCAAGCT +
Preference number: 4 (lower is better)
Translates to: CLSSSRGFRIRLSITFHSLYGIA*LLLEQA
Trigger: AGCTTGCTCTAAGAGCAAGCAGGCAATGCCGTAAAG...TGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCCTCTACTTGATGAGAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp TCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATTTCTTTACGGCATTGCCTaGTTGCTCTTAGAGCAAGCT +
Preference number: 4 (lower is better)
Translates to: SGSGSPSPSTHTQYISPFLYGIA*LLLEQA
Trigger: AGCTTGCTCTAAGAGCAAGCAGGCAATGCCGTAAAG...AAATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp AGCCAAGAAGTGCGAAAACCTGACCACTTCTTAAATAGATCCCTTATAGATCACGCAGGAGACCACCAGTaGCCTCCTCTCTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: SQEVRKPDHFLNRSLIDHAGDHQ*PPLCSV
Trigger: CACAGAGCAGAGAGGAGGGCACTGGTGGTCTCCTGC...GTGATCTATAAGGGATCTATTTAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp CTTGGACCAAAGAGCTGGGAAGAGATGACAACTGAGGAAAGCTTAGATAACAAGCAGACGAGAAGTCACTaGAAGGCGTGGCTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LGPKSWEEMTTEESLDNKQTRSH*KAWLAA
Trigger: TGCTGCTAGCCACGCCTTGCAGTGACTTCTCGTCTG...CTTGTTATCTAAGCTTTCCTCAGTTGTCATCTCTTCCCAGCTCTTTGGTCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR GCA 90 bp CACCACCTCCCCCAAACCACAAGAAGTTCCTTAGATTCTGGCCAAGATGTGCAAGCCATGAATACAGGGTaGCAGGAGAAAAGACTGGTT +
Preference number: 4 (lower is better)
Translates to: HHLPQTTRSSLDSGQDVQAMNTG*QEKRLV
Trigger: AACCAGTCTTTTCTCCTGGCACCCTGTATTCATGGC...TTGCACATCTTGGCCAGAATCTAAGGAACTTCTTGTGGTTTGGGGGAGGTGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR GCA 90 bp AAGAAGTTCCTTAGATTCTGGCCAAGATGTGCAATTTTGTCTGCCATGCCTTGCGAGGGGTGGAGCTACTaGACAACCAGCCACATCAGA +
Preference number: 4 (lower is better)
Translates to: KKFLRFWPRCAILSAMPCEGWSY*TTSHIR
Trigger: TCTGATGTGGCTGGTTGTGCAGTAGCTCCACCCCTC...GCAAGGCATGGCAGACAAAATTGCACATCTTGGCCAGAATCTAAGGAACTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR CCA 90 bp ATACCCAGTACATCTCCCCATTTTGACCCACTGAATTATTCCTCAACAATAGCAGTCTGCCCTGCCCAGTaGAGCCGGATCCGTGCTTTT +
Preference number: 4 (lower is better)
Translates to: IPSTSPHFDPLNYSSTIAVCPAQ*SRIRAF
Trigger: AAAAGCACGGATCCGGCTCCACTGGGCAGGGCAGAC...TGCTATTGTTGAGGAATAATTCAGTGGGTCAAAATGGGGAGATGTACTGGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR CCA 90 bp AAAGGCCCCAGCACCATTCAGCTAATGATTATTATTAACTCTGAACAGGCTTTAGTGCCTGGACAGCAGTaGCCAGCAGTGTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: KGPSTIQLMIIINSEQALVPGQQ*PAVSGL
Trigger: GAGCCCTGACACTGCTGGCCACTGCTGTCCAGGCAC...TAAAGCCTGTTCAGAGTTAATAATAATCATTAGCTGAATGGTGCTGGGGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR CCA 90 bp CCTGACCACTTCTTAAATAGATCCCTTATAGATCACCAAAGGAACCATGATGTTGTGCCTGGACAGCAGTaGCCAGCAGTGTCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: PDHFLNRSLIDHQRNHDVVPGQQ*PAVSGL
Trigger: GAGCCCTGACACTGCTGGCCACTGCTGTCCAGGCAC...AACATCATGGTTCCTTTGGTGATCTATAAGGGATCTATTTAAGAAGTGGTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR CCA 90 bp TCTCATCAAGTAGAGGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCCTTTGATCTGGGCCTaGAACCATACTGAGTACATG +
Preference number: 4 (lower is better)
Translates to: SHQVEASGSGSPSPSTHTPLIWA*NHTEYM
Trigger: CATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGG...GGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCCTCTACTTGATGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000533024.5
CDS-3UTR CCA 90 bp CAGGAACTCACATTTCCATTTTCTTCCTCGGCAAGTAGGATCTGGAAATCTGGTGCCGCACCTTTGATCTaGGCCTGGAACCATACTGAG +
Preference number: 4 (lower is better)
Translates to: QELTFPFSSSASRIWKSGAAPLI*AWNHTE
Trigger: CTCAGTATGGTTCCAGGCCCAGATCAAAGGTGCGGC...ACCAGATTTCCAGATCCTACTTGCCGAGGAAGAAAATGGAAATGTGAGTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR CCA 90 bp CACATCACTATCACCACCCAAAACTCTGTCTCTCATCAAGTAGAGGCTTCAGGACACGTGGTCCACAGCTaGGAGAGTGTTCTGAGACAT +
Preference number: 4 (lower is better)
Translates to: HITITTQNSVSHQVEASGHVVHS*ESVLRH
Trigger: ATGTCTCAGAACACTCTCCCAGCTGTGGACCACGTG...TCCTGAAGCCTCTACTTGATGAGAGACAGAGTTTTGGGTGGTGATAGTGATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp CATTTCCATTTTCTTCCTCGGCAAGTAGGATCTGGAAATCTGGTGCATGATCACCCTGAGTCTGCTAAGTaGTCCACGTGGTCCACAGCT +
Preference number: 4 (lower is better)
Translates to: HFHFLPRQVGSGNLVHDHPESAK*STWSTA
Trigger: AGCTGTGGACCACGTGGACCACTTAGCAGACTCAGG...GTGATCATGCACCAGATTTCCAGATCCTACTTGCCGAGGAAGAAAATGGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp GTACCTAAGGTTGTACAACAGAGCCTAAGAGGACCATATCCCATAAATAAGACCCCCTCATTTGCCAGCTaGCACCAAACTCAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: VPKVVQQSLRGPYPINKTPSFAS*HQTQPP
Trigger: AGGGGGCTGAGTTTGGTGCCAGCTGGCAAATGAGGG...GGTCTTATTTATGGGATATGGTCCTCTTAGGCTCTGTTGTACAACCTTAGGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp AAACCTGACCACTTCTTAAATAGATCCCTTATAGATCACCAAAGGAACCATGATACCTGCCCCTGCTCCTaGGAACTGGAGCTCCAGCGC +
Preference number: 4 (lower is better)
Translates to: KPDHFLNRSLIDHQRNHDTCPCS*ELELQR
Trigger: GCGCTGGAGCTCCAGTTCCCAGGAGCAGGGGCAGGT...ATCATGGTTCCTTTGGTGATCTATAAGGGATCTATTTAAGAAGTGGTCAGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp TTCTGCAGTCCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTAAATGGAATAGACATCAGATaGCACAGCCCACGCAAACTG +
Preference number: 4 (lower is better)
Translates to: FCSPWTSQEVRKPDHFLNGIDIR*HSPRKL
Trigger: CAGTTTGCGTGGGCTGTGCCATCTGATGTCTATTCC...ATTTAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGGACTGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp ACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTAAATAGATCCCTTATAGATAGGAGCCCATGCAGCTaGGAGCCACTGAGATCCCAG +
Preference number: 4 (lower is better)
Translates to: TSQEVRKPDHFLNRSLIDRSPCS*EPLRSQ
Trigger: CTGGGATCTCAGTGGCTCCCAGCTGCATGGGCTCCT...ATCTATAAGGGATCTATTTAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp GTACCTAAGGTTGTACAACAGAGCCTAAGAGGACCATATCCCATAAATAAGACCAGAGGAGGCCCAGGCTaGCAAGTGGTAACAGCCTAC +
Preference number: 4 (lower is better)
Translates to: VPKVVQQSLRGPYPINKTRGGPG*QVVTAY
Trigger: GTAGGCTGTTACCACTTGCCAGCCTGGGCCTCCTCT...GGTCTTATTTATGGGATATGGTCCTCTTAGGCTCTGTTGTACAACCTTAGGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR CCA 90 bp TTTTTCACTTCAGGAGGAACAACCAAGGTGACGAGGGGTGGAGCTACTGCACAATTGCAGCACTTACCCTaGCTCCTCTTAGGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: FFTSGGTTKVTRGGATAQLQHLP*LLLGSN
Trigger: ATTGCTACCTAAGAGGAGCCAGGGTAAGTGCTGCAA...TTGTGCAGTAGCTCCACCCCTCGTCACCTTGGTTGTTCCTCCTGAAGTGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR CCA 90 bp TCCTTAGATTCTGGCCAAGATGTGCAATTTTGTCTGCCATGCCTTGCAGCACTTGCCCAAGGAAGTCCATaGCTGCATCTCTTCAACACC +
Preference number: 4 (lower is better)
Translates to: SLDSGQDVQFCLPCLAALAQGSP*LHLFNT
Trigger: GGTGTTGAAGAGATGCAGCCATGGACTTCCTTGGGC...AAGTGCTGCAAGGCATGGCAGACAAAATTGCACATCTTGGCCAGAATCTAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528785.1
3UTR CAA 72 bp AAGAAGTTCCTTAGATTCTGGCCAAGATGTGCAATTTaGTCTGCCATGCCTTGCAGCACTTACCCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: KKFLRFWPRCAI*SAMPCSTYPGS
Trigger: GGAGCCAGGGTAAGTGCTGCAAGGCATGGCAGACAAAATTGCACATCTTGGCCAGAATCTAAGGAACTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR TCA 90 bp CCTAAGGTTGTACAACAGAGCCTAAGAGGACCATATCCCATAAATAAGACCCATAGAACGCCAAGGCCATaGATACAGGGTGCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: PKVVQQSLRGPYPINKTHRTPRP*IQGARR
Trigger: TCTCCTGGCACCCTGTATTCATGGCCTTGGCGTTCT...ATGGGTCTTATTTATGGGATATGGTCCTCTTAGGCTCTGTTGTACAACCTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310611.8
ENST00000420578.7
CDS-3UTR TCA 90 bp TGTCTCTCATCAAGTAGAGGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCACACACAAGCAAGAAATaGCCACCAGCACATCACTAT +
Preference number: 4 (lower is better)
Translates to: CLSSSRGFRIRLSITFHSHTSKK*PPAHHY
Trigger: ATAGTGATGTGCTGGTGGTCATTTCTTGCTTGTGTG...TGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCCTCTACTTGATGAGAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000533024.5
CDS-3UTR TCA 90 bp CCTAAGGTTGTACAACAGAGCCTAAGAGGACCATATCCCATAAATAAGACCCATGCTGGGAGAGTGTTCTaGGACATCGACCTGACAGAC +
Preference number: 4 (lower is better)
Translates to: PKVVQQSLRGPYPINKTHAGRVF*DIDLTD
Trigger: GTCTGTCAGGTCGATGTCTCAGAACACTCTCCCAGC...ATGGGTCTTATTTATGGGATATGGTCCTCTTAGGCTCTGTTGTACAACCTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp CAGGAACTCACATTTCCATTTTCTTCCTCGGCAAGTAGGATCTGGAAATCTGGTCAGAAGACCCTCACCTaGGTCCCTTCTTTCCACAGT +
Preference number: 4 (lower is better)
Translates to: QELTFPFSSSASRIWKSGQKTLT*VPSFHS
Trigger: ACTGTGGAAAGAAGGGACTCAGGTGAGGGTCTTCTG...ACCAGATTTCCAGATCCTACTTGCCGAGGAAGAAAATGGAAATGTGAGTTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp CCTGACCACTTCTTAAATAGATCCCTTATAGATCACCAAAGGAACCATGATGTTGGGGCTCCTTTGCCCTaGGAAGTGATTTCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: PDHFLNRSLIDHQRNHDVGAPLP*EVISGE
Trigger: CTCCCCCGAAATCACTTCTCAGGGCAAAGGAGCCCC...AACATCATGGTTCCTTTGGTGATCTATAAGGGATCTATTTAAGAAGTGGTCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp TTGGTTTCTGCAGTCCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTCTGTCCCCATACTATTaGATCAAACCAACCTCCTTA +
Preference number: 4 (lower is better)
Translates to: LVSAVPGPAKKCENLTTSLSPYY*IKPTSL
Trigger: TAAGGAGGTTGGTTTGATTCAATAGTATGGGGACAG...AGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGGACTGCAGAAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp CCCAGTACATCTCCCCATTTTGACCCACTGAATTATTCCTCAACAATAGCAGCTCAAAATCACCGCAGGTaGAATTCTCCATGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: PSTSPHFDPLNYSSTIAAQNHRR*NSPCSP
Trigger: GGGGCTGCATGGAGAATTTCACCTGCGGTGATTTTG...AGCTGCTATTGTTGAGGAATAATTCAGTGGGTCAAAATGGGGAGATGTACTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp CCCAGTACATCTCCCCATTTTGACCCACTGAATTATTCCTCAACAATAGCAGCTCTTAGGGAGGATGCCTaGATCTCCCACAGTGAGGTT +
Preference number: 4 (lower is better)
Translates to: PSTSPHFDPLNYSSTIAALREDA*ISHSEV
Trigger: AACCTCACTGTGGGAGATTCAGGCATCCTCCCTAAG...AGCTGCTATTGTTGAGGAATAATTCAGTGGGTCAAAATGGGGAGATGTACTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR TCA 90 bp TGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTAAATAGATCCCTTATACAGAAATGCTGGGCTTaGGGCATCAAGACCAGGGGT +
Preference number: 4 (lower is better)
Translates to: WTSQEVRKPDHFLNRSLIQKCWA*GIKTRG
Trigger: ACCCCTGGTCTTGATGCCTCAAGCCCAGCATTTCTG...TATAAGGGATCTATTTAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR GCA 90 bp GTGCGAAAACCTGACCACTTCTTAAATAGATCCCTTATAGATCACCAAAGGAACCCCAAAGCTACCAGGTaGGCCAAGATCCCACTGCCT +
Preference number: 4 (lower is better)
Translates to: VRKPDHFLNRSLIDHQRNPKATR*AKIPLP
Trigger: AGGCAGTGGGATCTTGGCGCACCTGGTAGCTTTGGG...GTTCCTTTGGTGATCTATAAGGGATCTATTTAAGAAGTGGTCAGGTTTTCGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
CDS-3UTR GCA 90 bp ATACCCAGTACATCTCCCCATTTTGACCCACTGAATTATTCCTCAACAATAGCACCCAAAGCTACCAGGTaGGCCAAGATCCCACTGCCT +
Preference number: 4 (lower is better)
Translates to: IPSTSPHFDPLNYSSTIAPKATR*AKIPLP
Trigger: AGGCAGTGGGATCTTGGCGCACCTGGTAGCTTTGGG...TGCTATTGTTGAGGAATAATTCAGTGGGTCAAAATGGGGAGATGTACTGGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
CDS-3UTR GCA 90 bp TTCTGCAGTCCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTAAATGCCATGAATACAGGGTaGCAGGAGAAAAGACCTCAA +
Preference number: 4 (lower is better)
Translates to: FCSPWTSQEVRKPDHFLNAMNTG*QEKRPQ
Trigger: TTGAGGTCTTTTCTCCTGGCACCCTGTATTCATGGC...ATTTAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGGACTGCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310611.8
ENST00000430195.2
CDS-3UTR GCA 90 bp CACATCACTATCACCACCCAAAACTCTGTCTCTCATCAAGTAGAGGCTTCAGGAGATCTGGAAATCTGGTaGATGATCACCAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: HITITTQNSVSHQVEASGDLEIW*MITRAG
Trigger: TCCAGCCCTGGTGATCATGCACCAGATTTCCAGATC...TCCTGAAGCCTCTACTTGATGAGAGACAGAGTTTTGGGTGGTGATAGTGATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000533024.5
CDS-3UTR GCA 90 bp CACATCACTATCACCACCCAAAACTCTGTCTCTCATCAAGTAGAGGCTTCAGGAGGACCAGCCAAGAAGTaGGAAAACCTGACCACTTCT +
Preference number: 4 (lower is better)
Translates to: HITITTQNSVSHQVEASGGPAKK*ENLTTS
Trigger: AGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCC...TCCTGAAGCCTCTACTTGATGAGAGACAGAGTTTTGGGTGGTGATAGTGATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000533024.5
CDS-3UTR GCA 90 bp GCCCTGGCACAGGGACCAAATCAGCACAAATTTCTGAAGGGCCTCAAGGGCAGATCCACTACATCACACTaGTTTCTTAAAAGTAACCCA +
Preference number: 4 (lower is better)
Translates to: ALAQGPNQHKFLKGLKGRSTTSH*FLKSNP
Trigger: TGGGTTACTTTTAAGAAAGCAGTGTGATGTAGTGGA...TCTGCCCTTGAGGCCCTTCAGAAATTTGTGCTGATTTGGTCCCTGTGCCAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp CCCAGTACATCTCCCCATTTTGACCCACTGAATTATTCCTCAACAATAGCAGCTGCTGTTGTCAGGCCTTaGCATGATCTAGGGAGATCC +
Preference number: 4 (lower is better)
Translates to: PSTSPHFDPLNYSSTIAAAVVRP*HDLGRS
Trigger: GGATCTCCCTAGATCATGGCAAGGCCTGACAACAGC...AGCTGCTATTGTTGAGGAATAATTCAGTGGGTCAAAATGGGGAGATGTACTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp CACTTCTTAAATAGATCCCTTATAGATCACCAAAGGAACCATGATGTTCAAGGCTGCGGAAGGGCAGCCTaGCTTGTGAAAGGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: HFLNRSLIDHQRNHDVQGCGRAA*LVKGWG
Trigger: TCCCCACCCTTTCACAAGGCAGGCTGCCCTTCCGCA...GCCTTGAACATCATGGTTCCTTTGGTGATCTATAAGGGATCTATTTAAGAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR CCA 90 bp CATTTCCATTTTCTTCCTCGGCAAGTAGGATCTGGAAATCTGGTGCATGATCACGTGAGAAGAGTAGGATaGCTTCAGCCATGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: HFHFLPRQVGSGNLVHDHVRRVG*LQPCRG
Trigger: GCCTCTGCATGGCTGAAGCCATCCTACTCTTCTCAC...GTGATCATGCACCAGATTTCCAGATCCTACTTGCCGAGGAAGAAAATGGAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR CCA 90 bp TTAAATAGATCCCTTATAGATCACCAAAGGAACCATGATGTTCAAGGCAAGCGTAGCCCACACAGTGCCTaGACAGCAGTGGCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: LNRSLIDHQRNHDVQGKRSPHSA*TAVASS
Trigger: ACTGCTGGCCACTGCTGTCCAGGCACTGTGTGGGCT...ACGCTTGCCTTGAACATCATGGTTCCTTTGGTGATCTATAAGGGATCTATTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR CCA 90 bp ATACCCAGTACATCTCCCCATTTTGACCCACTGAATTATTCCTCAACAATAGCACATGATCACCAGGGCTaGATAGACGGGCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: IPSTSPHFDPLNYSSTIAHDHQG*IDGQCQ
Trigger: CTGGCACTGCCCGTCTATCCAGCCCTGGTGATCATG...TGCTATTGTTGAGGAATAATTCAGTGGGTCAAAATGGGGAGATGTACTGGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR CCA 90 bp GAACTACTTTCAGCTGCAGCAAGGAGCGGGGTGGTCTCTGGAGGGAAGAGAGTCAGTGGTCTTAAGATATaGAATGTACCTAAGGTTGTA +
Preference number: 4 (lower is better)
Translates to: ELLSAAARSGVVSGGKRVSGLKI*NVPKVV
Trigger: TACAACCTTAGGTACATTCCATATCTTAAGACCACT...GACTCTCTTCCCTCCAGAGACCACCCCGCTCCTTGCTGCAGCTGAAAGTAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp GCCGCACCTTTGATCTGGGCCTGGAACCATACTGAGTACATGCCCAGAAGCACCAGTGGTCTTAAGATATaGAATGTACCTAAGGTTGTA +
Preference number: 4 (lower is better)
Translates to: AAPLIWAWNHTEYMPRSTSGLKI*NVPKVV
Trigger: TACAACCTTAGGTACATTCCATATCTTAAGACCACT...GGTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGGTGCGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp GTACCTAAGGTTGTACAACAGAGCCTAAGAGGACCATATCCCATAAATAAGACCCAGCAGCCTTCGGCTTaGTTAAGCCAATGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: VPKVVQQSLRGPYPINKTQQPSA*LSQCPP
Trigger: AGGAGGGCATTGGCTTAACCAAGCCGAAGGCTGCTG...GGTCTTATTTATGGGATATGGTCCTCTTAGGCTCTGTTGTACAACCTTAGGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp ATACCCAGTACATCTCCCCATTTTGACCCACTGAATTATTCCTCAACAATAGCACCCTCATTTGCCAGCTaGCACCAAACTCAGCCCCCT +
Preference number: 4 (lower is better)
Translates to: IPSTSPHFDPLNYSSTIAPSFAS*HQTQPP
Trigger: AGGGGGCTGAGTTTGGTGCCAGCTGGCAAATGAGGG...TGCTATTGTTGAGGAATAATTCAGTGGGTCAAAATGGGGAGATGTACTGGGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp CCTGACCACTTCTTAAATAGATCCCTTATAGATCACCAAAGGAACCATGATGTTCAGCAAGGAGCGGGGTaGTCTCTGGAGGGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: PDHFLNRSLIDHQRNHDVQQGAG*SLEGRE
Trigger: CTCTCTTCCCTCCAGAGACCACCCCGCTCCTTGCTG...AACATCATGGTTCCTTTGGTGATCTATAAGGGATCTATTTAAGAAGTGGTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp CCTGACCACTTCTTAAATAGATCCCTTATAGATCACCAAAGGAACCATGATGTTCCACCGAGGGCAGCCTaGGGAACTACTTTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PDHFLNRSLIDHQRNHDVPPRAA*GTTFSC
Trigger: GCAGCTGAAAGTAGTTCCCCAGGCTGCCCTCGGTGG...AACATCATGGTTCCTTTGGTGATCTATAAGGGATCTATTTAAGAAGTGGTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp CACTTCTTAAATAGATCCCTTATAGATCACCAAAGGAACCATGATGTTCAAGGCCTGGTGAACTTTGCCTaGCCCTCCTACCCTGCGGCA +
Preference number: 4 (lower is better)
Translates to: HFLNRSLIDHQRNHDVQGLVNFA*PSYPAA
Trigger: TGCCGCAGGGTAGGAGGGCCAGGCAAAGTTCACCAG...GCCTTGAACATCATGGTTCCTTTGGTGATCTATAAGGGATCTATTTAAGAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp CACATCACTATCACCACCCAAAACTCTGTCTCTCATCAAGTAGAGGCTTCAGGAGGAATAGACATCAGATaGCACAGCCCACGCAAACTG +
Preference number: 4 (lower is better)
Translates to: HITITTQNSVSHQVEASGGIDIR*HSPRKL
Trigger: CAGTTTGCGTGGGCTGTGCCATCTGATGTCTATTCC...TCCTGAAGCCTCTACTTGATGAGAGACAGAGTTTTGGGTGGTGATAGTGATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp CCTGACCACTTCTTAAATAGATCCCTTATAGATCACCAAAGGAACCATGATGTTGCGGGGAACAGAGGATaGCGGAGGAGGGAACACACA +
Preference number: 4 (lower is better)
Translates to: PDHFLNRSLIDHQRNHDVAGNRG*RRREHT
Trigger: TGTGTGTTCCCTCCTCCGCCATCCTCTGTTCCCCGC...AACATCATGGTTCCTTTGGTGATCTATAAGGGATCTATTTAAGAAGTGGTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp GAAGTGCGAAAACCTGACCACTTCTTAAATAGATCCCTTATAGATCACCAAAGGGGCTCAGAGGAGGGGTaGTTACAGAAAAGACGGGGG +
Preference number: 4 (lower is better)
Translates to: EVRKPDHFLNRSLIDHQRGSEEG*LQKRRG
Trigger: CCCCCGTCTTTTCTGTAACCACCCCTCCTCTGAGCC...CCTTTGGTGATCTATAAGGGATCTATTTAAGAAGTGGTCAGGTTTTCGCACTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR CCA 90 bp CAGGAACTCACATTTCCATTTTCTTCCTCGGCAAGTAGGATCTGGAAATCTGGTATGAGAAAGAAGGGATaGGCCAGTGAGTGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: QELTFPFSSSASRIWKSGMRKKG*ASECGR
Trigger: CCTTCCGCACTCACTGGCCCATCCCTTCTTTCTCAT...ACCAGATTTCCAGATCCTACTTGCCGAGGAAGAAAATGGAAATGTGAGTTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310611.8
ENST00000430195.2
CDS-3UTR CCA 90 bp GAAGTGCGAAAACCTGACCACTTCTTAAATAGATCCCTTATAGATCACCAAAGGGAAAAGACTGGTTCCTaGCCGGGACAGCGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: EVRKPDHFLNRSLIDHQREKTGS*PGQRCQ
Trigger: CTGACAGCGCTGTCCCGGCCAGGAACCAGTCTTTTC...CCTTTGGTGATCTATAAGGGATCTATTTAAGAAGTGGTCAGGTTTTCGCACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420578.7
ENST00000496961.5
CDS-3UTR CCA 90 bp CACTTCTTAAATAGATCCCTTATAGATCACCAAAGGAACCATGATGTTCAAGGCAGGCAGAATGGTTCCTaGCCGGGACAGCGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: HFLNRSLIDHQRNHDVQGRQNGS*PGQRCQ
Trigger: CTGACAGCGCTGTCCCGGCCAGGAACCATTCTGCCT...GCCTTGAACATCATGGTTCCTTTGGTGATCTATAAGGGATCTATTTAAGAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527072.5
CDS-3UTR TCA 90 bp GAAGTGCGAAAACCTGACCACTTCTTAAATAGATCCCTTATAGATCACCAAAGGGGCCTGGAACCATACTaGGTACATGCCCAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: EVRKPDHFLNRSLIDHQRGLEPY*VHAQKH
Trigger: GTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGCC...CCTTTGGTGATCTATAAGGGATCTATTTAAGAAGTGGTCAGGTTTTCGCACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR TCA 90 bp CTTGGACCAAAGAGCTGGGAAGAGATGACAACTGAGGAAAGCTTAGATAACAAGTGGAAATCTGGTGCATaGTCACCAGGGCTGGATAGA +
Preference number: 4 (lower is better)
Translates to: LGPKSWEEMTTEESLDNKWKSGA*SPGLDR
Trigger: TCTATCCAGCCCTGGTGATCATGCACCAGATTTCCA...CTTGTTATCTAAGCTTTCCTCAGTTGTCATCTCTTCCCAGCTCTTTGGTCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp CATTTCCATTTTCTTCCTCGGCAAGTAGGATCTGGAAATCTGGTGCATGATCACTGGAAATCTGGTGCATaGTCACCAGGGCTGGATAGA +
Preference number: 4 (lower is better)
Translates to: HFHFLPRQVGSGNLVHDHWKSGA*SPGLDR
Trigger: TCTATCCAGCCCTGGTGATCATGCACCAGATTTCCA...GTGATCATGCACCAGATTTCCAGATCCTACTTGCCGAGGAAGAAAATGGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR TCA 90 bp CTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATTTTGACCCACTGAATCACACAAGCAAGAAATaGCCACCAGCACATCACTAT +
Preference number: 4 (lower is better)
Translates to: LHHLPLIPSTSPHFDPLNHTSKK*PPAHHY
Trigger: ATAGTGATGTGCTGGTGGTCATTTCTTGCTTGTGTG...ATTCAGTGGGTCAAAATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000533024.5
CDS-3UTR TCA 90 bp ATCACCAAAGGAACCATGATGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCACACAAGCAAGAAATaGCCACCAGCACATCACTAT +
Preference number: 4 (lower is better)
Translates to: ITKGTMMFKASVPPRFSVHTSKK*PPAHHY
Trigger: ATAGTGATGTGCTGGTGGTCATTTCTTGCTTGTGTG...AACGCTGAATCTAGGTGGGACGCTTGCCTTGAACATCATGGTTCCTTTGGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000533024.5
CDS-3UTR TCA 90 bp ACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTAAATAGATCCCTTATAGATGATCCTGAGGTGGGCTaGAGGAAGATCTTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: TSQEVRKPDHFLNRSLIDDPEVG*RKILAG
Trigger: CCCAGCTAAGATCTTCCTTCAGCCCACCTCAGGATC...ATCTATAAGGGATCTATTTAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp CCTAAGGTTGTACAACAGAGCCTAAGAGGACCATATCCCATAAATAAGACCCATGCTAAGGCAAGAACCTaGGCCCTAAGAAGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: PKVVQQSLRGPYPINKTHAKART*ALRRAK
Trigger: CTTTGCCCTTCTTAGGGCTCAGGTTCTTGCCTTAGC...ATGGGTCTTATTTATGGGATATGGTCCTCTTAGGCTCTGTTGTACAACCTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp AAAGGCCCCAGCACCATTCAGCTAATGATTATTATTAACTCTGAACAGGCTTTACCCAAAGCTACCAGGTaGGCCAAGATCCCACTGCCT +
Preference number: 4 (lower is better)
Translates to: KGPSTIQLMIIINSEQALPKATR*AKIPLP
Trigger: AGGCAGTGGGATCTTGGCGCACCTGGTAGCTTTGGG...TAAAGCCTGTTCAGAGTTAATAATAATCATTAGCTGAATGGTGCTGGGGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR GCA 90 bp AAGAAGTTCCTTAGATTCTGGCCAAGATGTGCAATTTTGTCTGCCATGCCTTGCGATCTGGAAATCTGGTaGATGATCACCAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: KKFLRFWPRCAILSAMPCDLEIW*MITRAG
Trigger: TCCAGCCCTGGTGATCATGCACCAGATTTCCAGATC...GCAAGGCATGGCAGACAAAATTGCACATCTTGGCCAGAATCTAAGGAACTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR GCA 90 bp CCTAAGGTTGTACAACAGAGCCTAAGAGGACCATATCCCATAAATAAGACCCATAGCAGCTTTGGTTTCTaGAGTCCCTGGACCAGCCAA +
Preference number: 4 (lower is better)
Translates to: PKVVQQSLRGPYPINKTHSSFGF*SPWTSQ
Trigger: TTGGCTGGTCCAGGGACTGCAGAAACCAAAGCTGCT...ATGGGTCTTATTTATGGGATATGGTCCTCTTAGGCTCTGTTGTACAACCTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp GTACCTAAGGTTGTACAACAGAGCCTAAGAGGACCATATCCCATAAATAAGACCAGTCCAGCCCTCATTTaGCAGCTGGCACCAAACTCA +
Preference number: 4 (lower is better)
Translates to: VPKVVQQSLRGPYPINKTSPALI*QLAPNS
Trigger: TGAGTTTGGTGCCAGCTGGCAAATGAGGGCTGGACT...GGTCTTATTTATGGGATATGGTCCTCTTAGGCTCTGTTGTACAACCTTAGGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp GAAGTGCGAAAACCTGACCACTTCTTAAATAGATCCCTTATAGATCACCAAAGGACATCTAGGAACACCTaGCCCTGCTCCTGGGAACTG +
Preference number: 4 (lower is better)
Translates to: EVRKPDHFLNRSLIDHQRTSRNT*PCSWEL
Trigger: CAGTTCCCAGGAGCAGGGGCAGGTGTTCCTAGATGT...CCTTTGGTGATCTATAAGGGATCTATTTAAGAAGTGGTCAGGTTTTCGCACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp TTAAATAGATCCCTTATAGATCACCAAAGGAACCATGATGTTCAAGGCAAGCGTCAAGCTGGTGAACTTTaGCTGGCCCTCCTACCCTGC +
Preference number: 4 (lower is better)
Translates to: LNRSLIDHQRNHDVQGKRQAGEL*LALLPC
Trigger: GCAGGGTAGGAGGGCCAGGCAAAGTTCACCAGCTTG...ACGCTTGCCTTGAACATCATGGTTCCTTTGGTGATCTATAAGGGATCTATTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp GATGCACCTTTCATTTCATGTTACACAGGATCTTTGTGCCAACCAGACACAGGAACCTATTCCCTACACTaGAGTCAGACCAGGCTAAGC +
Preference number: 4 (lower is better)
Translates to: DAPFISCYTGSLCQPDTGTYSLH*SQTRLS
Trigger: GCTTAGCCTGGTCTGACTGCAGTGTAGGGAATAGGT...TCCTGTGTCTGGTTGGCACAAAGATCCTGTGTAACATGAAATGAAAGGTGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR GCA 90 bp ATTTGGAAAGTTGTTTTTCACTTCAGGAGGAACAACCAAGGTGACGAGGGGTGGCAATTTTGTCTGCCATaGCTTGCAGCACTTACCCTG +
Preference number: 4 (lower is better)
Translates to: IWKVVFHFRRNNQGDEGWQFCLP*LAALTL
Trigger: CAGGGTAAGTGCTGCAAGGCATGGCAGACAAAATTG...CCACCCCTCGTCACCTTGGTTGTTCCTCCTGAAGTGAAAAACAACTTTCCAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR GCA 90 bp CACCACCTCCCCCAAACCACAAGAAGTTCCTTAGATTCTGGCCAAGATGTGCAAATGTGCAATTTTGTCTaGCATGCCTTGCAGCACTTA +
Preference number: 4 (lower is better)
Translates to: HHLPQTTRSSLDSGQDVQMCNFV*HALQHL
Trigger: TAAGTGCTGCAAGGCATGGCAGACAAAATTGCACAT...TTGCACATCTTGGCCAGAATCTAAGGAACTTCTTGTGGTTTGGGGGAGGTGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR CCA 90 bp CCTGACCACTTCTTAAATAGATCCCTTATAGATCACCAAAGGAACCATGATGTTACCTGTTTTGGTTCCTaGCCGGGACAGCGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: PDHFLNRSLIDHQRNHDVTCFGS*PGQRCQ
Trigger: CTGACAGCGCTGTCCCGGCCAGGAACCAAAACAGGT...AACATCATGGTTCCTTTGGTGATCTATAAGGGATCTATTTAAGAAGTGGTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000430195.2
CDS-3UTR CCA 90 bp TGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTAAATAGATCCCTTATAGTGAGAAGAGTAGGATaGCTTCAGCCATGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: WTSQEVRKPDHFLNRSLIVRRVG*LQPCRG
Trigger: GCCTCTGCATGGCTGAAGCCATCCTACTCTTCTCAC...TATAAGGGATCTATTTAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR CCA 90 bp CACTTCTTAAATAGATCCCTTATAGATCACCAAAGGAACCATGATGTTCAAGGCCATGATCACCAGGGCTaGATAGACGGGCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: HFLNRSLIDHQRNHDVQGHDHQG*IDGQCQ
Trigger: CTGGCACTGCCCGTCTATCCAGCCCTGGTGATCATG...GCCTTGAACATCATGGTTCCTTTGGTGATCTATAAGGGATCTATTTAAGAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR CCA 90 bp GAAGTGCGAAAACCTGACCACTTCTTAAATAGATCCCTTATAGATCACCAAAGGAAGGAAGATCTTAGCTaGGCTAGGCAGCCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: EVRKPDHFLNRSLIDHQRKEDLS*ARQPSQ
Trigger: CTGGCTGGGCTGCCTAGCCCAGCTAAGATCTTCCTT...CCTTTGGTGATCTATAAGGGATCTATTTAAGAAGTGGTCAGGTTTTCGCACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp AAACCTGACCACTTCTTAAATAGATCCCTTATAGATCACCAAAGGAACCATGATCCTGCTCCTGGGAACTaGAGCTCCAGCGCCTACATC +
Preference number: 4 (lower is better)
Translates to: KPDHFLNRSLIDHQRNHDPAPGN*SSSAYI
Trigger: GATGTAGGCGCTGGAGCTCCAGTTCCCAGGAGCAGG...ATCATGGTTCCTTTGGTGATCTATAAGGGATCTATTTAAGAAGTGGTCAGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp TGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTAAATAGATCCCTTATAATGAGAAAGAAGGGATaGGCCAGTGAGTGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: WTSQEVRKPDHFLNRSLIMRKKG*ASECGR
Trigger: CCTTCCGCACTCACTGGCCCATCCCTTCTTTCTCAT...TATAAGGGATCTATTTAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR CCA 90 bp GTACCTAAGGTTGTACAACAGAGCCTAAGAGGACCATATCCCATAAATAAGACCGAAGGGCAGGAGTACTaGAAGTTCAGGCTCAACAGC +
Preference number: 4 (lower is better)
Translates to: VPKVVQQSLRGPYPINKTEGQEY*KFRLNS
Trigger: GCTGTTGAGCCTGAACTTCCAGTACTCCTGCCCTTC...GGTCTTATTTATGGGATATGGTCCTCTTAGGCTCTGTTGTACAACCTTAGGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR CCA 90 bp GTACCTAAGGTTGTACAACAGAGCCTAAGAGGACCATATCCCATAAATAAGACCGCCTCATGTCTGGCTTaGAGGCCTGAGAAAAAGGAG +
Preference number: 4 (lower is better)
Translates to: VPKVVQQSLRGPYPINKTASCLA*RPEKKE
Trigger: CTCCTTTTTCTCAGGCCTCCAAGCCAGACATGAGGC...GGTCTTATTTATGGGATATGGTCCTCTTAGGCTCTGTTGTACAACCTTAGGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp ACATCCTCACCACCTCCCCCAAACCACAAGAAGTTCCTTAGATTCTGGCCAAGACTGATGAGGACTACTTaGAGTTTGGAGTTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: TSSPPPPNHKKFLRFWPRLMRTT*SLEFSL
Trigger: AAGAGAGAACTCCAAACTCCAAGTAGTCCTCATCAG...TCTTGGCCAGAATCTAAGGAACTTCTTGTGGTTTGGGGGAGGTGGTGAGGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR TCA 90 bp CCTGACCACTTCTTAAATAGATCCCTTATAGATCACCAAAGGAACCATGATGTTTCAGATGGTAGAGCTTaGGGCGAGCCACCCTTGAGA +
Preference number: 4 (lower is better)
Translates to: PDHFLNRSLIDHQRNHDVSDGRA*GEPPLR
Trigger: TCTCAAGGGTGGCTCGCCTCAAGCTCTACCATCTGA...AACATCATGGTTCCTTTGGTGATCTATAAGGGATCTATTTAAGAAGTGGTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR TCA 90 bp CATTTCCATTTTCTTCCTCGGCAAGTAGGATCTGGAAATCTGGTGCATGATCACAGTAACCGTTTCTTCTaGGTTCACACCACACTGGAG +
Preference number: 4 (lower is better)
Translates to: HFHFLPRQVGSGNLVHDHSNRFF*VHTTLE
Trigger: CTCCAGTGTGGTGTGAACTCAGAAGAAACGGTTACT...GTGATCATGCACCAGATTTCCAGATCCTACTTGCCGAGGAAGAAAATGGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp AAAGGCCCCAGCACCATTCAGCTAATGATTATTATTAACTCTGAACAGGCTTTAAAGGTGAGGGCTGACTaGCTCAGCCTGCAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: KGPSTIQLMIIINSEQALKVRAD*LSLQVL
Trigger: AAGCACTTGCAGGCTGAGTCAGTCAGCCCTCACCTT...TAAAGCCTGTTCAGAGTTAATAATAATCATTAGCTGAATGGTGCTGGGGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR TCA 90 bp CACATCACTATCACCACCCAAAACTCTGTCTCTCATCAAGTAGAGGCTTCAGGAGTCTTATTAGTTTACTaGGAGGACTCAGTGCCCACT +
Preference number: 4 (lower is better)
Translates to: HITITTQNSVSHQVEASGVLLVY*EDSVPT
Trigger: AGTGGGCACTGAGTCCTCTCAGTAAACTAATAAGAC...TCCTGAAGCCTCTACTTGATGAGAGACAGAGTTTTGGGTGGTGATAGTGATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR GCA 90 bp CAGGAACTCACATTTCCATTTTCTTCCTCGGCAAGTAGGATCTGGAAATCTGGTACCATACTGAGTACATaGCCAGAAGCACCGTTACTG +
Preference number: 4 (lower is better)
Translates to: QELTFPFSSSASRIWKSGTILST*PEAPLL
Trigger: CAGTAACGGTGCTTCTGGGCATGTACTCAGTATGGT...ACCAGATTTCCAGATCCTACTTGCCGAGGAAGAAAATGGAAATGTGAGTTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR GCA 90 bp CTATTTGGAAAGTTGTTTTTCACTTCAGGAGGAACAACCAAGGTGACGAGGGGTACCATACTGAGTACATaGCCAGAAGCACCGTTACTG +
Preference number: 4 (lower is better)
Translates to: LFGKLFFTSGGTTKVTRGTILST*PEAPLL
Trigger: CAGTAACGGTGCTTCTGGGCATGTACTCAGTATGGT...ACCCCTCGTCACCTTGGTTGTTCCTCCTGAAGTGAAAAACAACTTTCCAAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR GCA 90 bp TTGGTTTCTGCAGTCCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTCCACTACATCACACTaGTTTCTTAAAAGTAACCCA +
Preference number: 4 (lower is better)
Translates to: LVSAVPGPAKKCENLTTSSTTSH*FLKSNP
Trigger: TGGGTTACTTTTAAGAAAGCAGTGTGATGTAGTGGA...AGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGGACTGCAGAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp GGCATAATGAGTTACGTGGAGAGGACACTTCTGCCCTTGCTGTCCCCATTCTGTTCCACTACATCACACTaGTTTCTTAAAAGTAACCCA +
Preference number: 4 (lower is better)
Translates to: GIMSYVERTLLPLLSPFCSTTSH*FLKSNP
Trigger: TGGGTTACTTTTAAGAAAGCAGTGTGATGTAGTGGA...ACAGAATGGGGACAGCAAGGGCAGAAGTGTCCTCTCCACGTAACTCATTATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp CCTAAGGTTGTACAACAGAGCCTAAGAGGACCATATCCCATAAATAAGACCCATCAGGCTTTACGGCATTaGCTGCTTGCTCTTAGAGCA +
Preference number: 4 (lower is better)
Translates to: PKVVQQSLRGPYPINKTHQALRH*LLALRA
Trigger: TGCTCTAAGAGCAAGCAGGCAATGCCGTAAAGCCTG...ATGGGTCTTATTTATGGGATATGGTCCTCTTAGGCTCTGTTGTACAACCTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp CAGGAACTCACATTTCCATTTTCTTCCTCGGCAAGTAGGATCTGGAAATCTGGTAAAAGGGCAACCATGTaGTTCTCCTCCAAGGCGTTT +
Preference number: 4 (lower is better)
Translates to: QELTFPFSSSASRIWKSGKRATM*FSSKAF
Trigger: AAACGCCTTGGAGGAGAAGCACATGGTTGCCCTTTT...ACCAGATTTCCAGATCCTACTTGCCGAGGAAGAAAATGGAAATGTGAGTTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp CCCAGTACATCTCCCCATTTTGACCCACTGAATTATTCCTCAACAATAGCAGCTAAAAGGGCAACCATGTaGTTCTCCTCCAAGGCGTTT +
Preference number: 4 (lower is better)
Translates to: PSTSPHFDPLNYSSTIAAKRATM*FSSKAF
Trigger: AAACGCCTTGGAGGAGAAGCACATGGTTGCCCTTTT...AGCTGCTATTGTTGAGGAATAATTCAGTGGGTCAAAATGGGGAGATGTACTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR GCA 90 bp AAAGGCCCCAGCACCATTCAGCTAATGATTATTATTAACTCTGAACAGGCTTTATACCAGAAGCCTCCCTaGTCTCTGAGCTTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: KGPSTIQLMIIINSEQALYQKPP*SLSLQR
Trigger: CCTCTGCAAGCTCAGAGAGCAGGGAGGCTTCTGGTA...TAAAGCCTGTTCAGAGTTAATAATAATCATTAGCTGAATGGTGCTGGGGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR GCA 90 bp CATTTCCATTTTCTTCCTCGGCAAGTAGGATCTGGAAATCTGGTGCATGATCACCTGAGAAAAAGGAGGTaGTCTCATACATCCGCCAAG +
Preference number: 4 (lower is better)
Translates to: HFHFLPRQVGSGNLVHDHLRKRR*SHTSAK
Trigger: CTTGGCGGATGTATGAGAGCACCTCCTTTTTCTCAG...GTGATCATGCACCAGATTTCCAGATCCTACTTGCCGAGGAAGAAAATGGAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp GAAGTGCGAAAACCTGACCACTTCTTAAATAGATCCCTTATAGATCACCAAAGGGTGAGAAGAGTAGGATaGCTTCAGCCATGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: EVRKPDHFLNRSLIDHQRVRRVG*LQPCRG
Trigger: GCCTCTGCATGGCTGAAGCCATCCTACTCTTCTCAC...CCTTTGGTGATCTATAAGGGATCTATTTAAGAAGTGGTCAGGTTTTCGCACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR CCA 90 bp AGTGATAGGGACGGAGTAAACCCATACTGCAGGTTTCCCAGCCCCCAAGCTGATAGTGGTCTTAAGATATaGAATGTACCTAAGGTTGTA +
Preference number: 4 (lower is better)
Translates to: SDRDGVNPYCRFPSPQADSGLKI*NVPKVV
Trigger: TACAACCTTAGGTACATTCCATATCTTAAGACCACT...ATCAGCTTGGGGGCTGGGAAACCTGCAGTATGGGTTTACTCCGTCCCTATCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR CCA 90 bp CCAAGTGAATACCCCAGACATGAGCAGAATAAGGGAGGTGCGGGGAACAGAGGAAGTGGTCTTAAGATATaGAATGTACCTAAGGTTGTA +
Preference number: 4 (lower is better)
Translates to: PSEYPRHEQNKGGAGNRGSGLKI*NVPKVV
Trigger: TACAACCTTAGGTACATTCCATATCTTAAGACCACT...TCCTCTGTTCCCCGCACCTCCCTTATTCTGCTCATGTCTGGGGTATTCACTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp CCTAAGGTTGTACAACAGAGCCTAAGAGGACCATATCCCATAAATAAGACCCATGGAATAGACATCAGATaGCACAGCCCACGCAAACTG +
Preference number: 4 (lower is better)
Translates to: PKVVQQSLRGPYPINKTHGIDIR*HSPRKL
Trigger: CAGTTTGCGTGGGCTGTGCCATCTGATGTCTATTCC...ATGGGTCTTATTTATGGGATATGGTCCTCTTAGGCTCTGTTGTACAACCTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp ATACCCAGTACATCTCCCCATTTTGACCCACTGAATTATTCCTCAACAATAGCATGGAAATCTGGTGCATaGTCACCAGGGCTGGATAGA +
Preference number: 4 (lower is better)
Translates to: IPSTSPHFDPLNYSSTIAWKSGA*SPGLDR
Trigger: TCTATCCAGCCCTGGTGATCATGCACCAGATTTCCA...TGCTATTGTTGAGGAATAATTCAGTGGGTCAAAATGGGGAGATGTACTGGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR TCA 90 bp AGCCAAGAAGTGCGAAAACCTGACCACTTCTTAAATAGATCCCTTATAGATCACTGTCAGGCCTTGCCATaGTCTAGGGAGATCCTATCT +
Preference number: 4 (lower is better)
Translates to: SQEVRKPDHFLNRSLIDHCQALP*SREILS
Trigger: AGATAGGATCTCCCTAGATCATGGCAAGGCCTGACA...GTGATCTATAAGGGATCTATTTAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp GATGCACCTTTCATTTCATGTTACACAGGATCTTTGTGCCAACCAGACACAGGACTGAATCTCCCACAGTaGGGTTTTCAAAACAAGACC +
Preference number: 4 (lower is better)
Translates to: DAPFISCYTGSLCQPDTGLNLPQ*GFQNKT
Trigger: GGTCTTGTTTTGAAAACCTCACTGTGGGAGATTCAG...TCCTGTGTCTGGTTGGCACAAAGATCCTGTGTAACATGAAATGAAAGGTGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR GCA 90 bp TGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTAAATAGATCCCTTATAACCATACTGAGTACATaGCCAGAAGCACCGTTACTG +
Preference number: 4 (lower is better)
Translates to: WTSQEVRKPDHFLNRSLITILST*PEAPLL
Trigger: CAGTAACGGTGCTTCTGGGCATGTACTCAGTATGGT...TATAAGGGATCTATTTAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR GCA 90 bp AAGTCTGATGAGGACTACTTGGAGTTTGGAGTTCTCTCTTCTGTTTTGGCCTGTATTCTGGCCAAGATGTaGAATTTTGTCTGCCATGCC +
Preference number: 4 (lower is better)
Translates to: KSDEDYLEFGVLSSVLACILAKM*NFVCHA
Trigger: GGCATGGCAGACAAAATTGCACATCTTGGCCAGAAT...ACAGGCCAAAACAGAAGAGAGAACTCCAAACTCCAAGTAGTCCTCATCAGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR CCA 90 bp GTACCTAAGGTTGTACAACAGAGCCTAAGAGGACCATATCCCATAAATAAGACCCCTTTGATCTGGGCCTaGAACCATACTGAGTACATG +
Preference number: 4 (lower is better)
Translates to: VPKVVQQSLRGPYPINKTPLIWA*NHTEYM
Trigger: CATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGG...GGTCTTATTTATGGGATATGGTCCTCTTAGGCTCTGTTGTACAACCTTAGGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp CCTGACCACTTCTTAAATAGATCCCTTATAGATCACCAAAGGAACCATGATGTTCACGTGGTCCACAGCTaGGAGAGTGTTCTGAGACAT +
Preference number: 4 (lower is better)
Translates to: PDHFLNRSLIDHQRNHDVHVVHS*ESVLRH
Trigger: ATGTCTCAGAACACTCTCCCAGCTGTGGACCACGTG...AACATCATGGTTCCTTTGGTGATCTATAAGGGATCTATTTAAGAAGTGGTCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp TGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTAAATAGATCCCTTATAGTTCCCTACATATCTTaGCCTTTGTCAGGTGCAAGT +
Preference number: 4 (lower is better)
Translates to: WTSQEVRKPDHFLNRSLIVPYIS*PLSGAS
Trigger: ACTTGCACCTGACAAAGGTCAAGATATGTAGGGAAC...TATAAGGGATCTATTTAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR GCA 90 bp ACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTAAATAGATCCCTTATAGATTACACAGGATCTTTGTaGCAACCAGACACAGGAGCA +
Preference number: 4 (lower is better)
Translates to: TSQEVRKPDHFLNRSLIDYTGSL*QPDTGA
Trigger: TGCTCCTGTGTCTGGTTGGCACAAAGATCCTGTGTA...ATCTATAAGGGATCTATTTAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR CCA 90 bp AGCCAAGAAGTGCGAAAACCTGACCACTTCTTAAATAGATCCCTTATAGATCACCTTGGACCAAAGAGCTaGGAAGAGATGACAACTGAG +
Preference number: 4 (lower is better)
Translates to: SQEVRKPDHFLNRSLIDHLGPKS*EEMTTE
Trigger: CTCAGTTGTCATCTCTTCCCAGCTCTTTGGTCCAAG...GTGATCTATAAGGGATCTATTTAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp GTACCTAAGGTTGTACAACAGAGCCTAAGAGGACCATATCCCATAAATAAGACCAAAATTAGCTGGATATaGTGGCACGTGCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: VPKVVQQSLRGPYPINKTKISWI*WHVPVV
Trigger: GACTACAGGCACGTGCCACCATATCCAGCTAATTTT...GGTCTTATTTATGGGATATGGTCCTCTTAGGCTCTGTTGTACAACCTTAGGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR GCA 90 bp TTAAATAGATCCCTTATAGATCACCAAAGGAACCATGATGTTCAAGGCAAGCGTAAAAGGGCAACCATGTaGTTCTCCTCCAAGGCGTTT +
Preference number: 4 (lower is better)
Translates to: LNRSLIDHQRNHDVQGKRKRATM*FSSKAF
Trigger: AAACGCCTTGGAGGAGAAGCACATGGTTGCCCTTTT...ACGCTTGCCTTGAACATCATGGTTCCTTTGGTGATCTATAAGGGATCTATTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp CACTTCTTAAATAGATCCCTTATAGATCACCAAAGGAACCATGATGTTCAAGGCCCTTTGATCTGGGCCTaGAACCATACTGAGTACATG +
Preference number: 4 (lower is better)
Translates to: HFLNRSLIDHQRNHDVQGPLIWA*NHTEYM
Trigger: CATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGG...GCCTTGAACATCATGGTTCCTTTGGTGATCTATAAGGGATCTATTTAAGAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR CCA 90 bp TTAAATAGATCCCTTATAGATCACCAAAGGAACCATGATGTTCAAGGCAAGCGTCTTGGACCAAAGAGCTaGGAAGAGATGACAACTGAG +
Preference number: 4 (lower is better)
Translates to: LNRSLIDHQRNHDVQGKRLGPKS*EEMTTE
Trigger: CTCAGTTGTCATCTCTTCCCAGCTCTTTGGTCCAAG...ACGCTTGCCTTGAACATCATGGTTCCTTTGGTGATCTATAAGGGATCTATTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR TCA 90 bp AAAGGCCCCAGCACCATTCAGCTAATGATTATTATTAACTCTGAACAGGCTTTACACACAAGCAAGAAATaGCCACCAGCACATCACTAT +
Preference number: 4 (lower is better)
Translates to: KGPSTIQLMIIINSEQALHTSKK*PPAHHY
Trigger: ATAGTGATGTGCTGGTGGTCATTTCTTGCTTGTGTG...TAAAGCCTGTTCAGAGTTAATAATAATCATTAGCTGAATGGTGCTGGGGCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR TCA 90 bp CACTTCTTAAATAGATCCCTTATAGATCACCAAAGGAACCATGATGTTCAAGGCTCTGAGACATCGACCTaGCAGACGCTGTATATTAGA +
Preference number: 4 (lower is better)
Translates to: HFLNRSLIDHQRNHDVQGSETST*QTLYIR
Trigger: TCTAATATACAGCGTCTGTCAGGTCGATGTCTCAGA...GCCTTGAACATCATGGTTCCTTTGGTGATCTATAAGGGATCTATTTAAGAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CCA 90 bp CACTTCTTAAATAGATCCCTTATAGATCACCAAAGGAACCATGATGTTCAAGGCAAAATTAGCTGGATATaGTGGCACGTGCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: HFLNRSLIDHQRNHDVQGKISWI*WHVPVV
Trigger: GACTACAGGCACGTGCCACCATATCCAGCTAATTTT...GCCTTGAACATCATGGTTCCTTTGGTGATCTATAAGGGATCTATTTAAGAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR CCA 90 bp CTATTTGGAAAGTTGTTTTTCACTTCAGGAGGAACAACCAAGGTGACGAGGGGTAAGTTCCTTAGATTCTaGCCAAGATGTGCAATTTTG +
Preference number: 4 (lower is better)
Translates to: LFGKLFFTSGGTTKVTRGKFLRF*PRCAIL
Trigger: CAAAATTGCACATCTTGGCCAGAATCTAAGGAACTT...ACCCCTCGTCACCTTGGTTGTTCCTCCTGAAGTGAAAAACAACTTTCCAAATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528785.1
3UTR CAA 72 bp TTAAAAGAATGCGAATTTGAATACTTACCTAAAGTCTaGACCGAAGGGCAGCCCTCCTCTATTTGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: LKECEFEYLPKV*TEGQPSSIWKV
Trigger: AACTTTCCAAATAGAGGAGGGCTGCCCTTCGGTCAAGACTTTAGGTAAGTATTCAAATTCGCATTCTTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS GCA 90 bp CTCGGCTCCCCAGCTGGAGCGGGAACCAGACCTACCTCCAGGGGCTaGATGGCCGTGGCCCGCGGGCCCGTACACTCCAGCTGCCCGAAC +
Preference number: 5 (lower is better)
Translates to: LGSPAGAGTRPTSRG*MAVARGPVHSSCPN
Trigger: GTTCGGGCAGCTGGAGTGTACGGGCCCGCGGGCCACGGCCATGCAGCCCCTGGAGGTAGGTCTGGTTCCCGCTCCAGCTGGGGAGCCGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000496961.5
ENST00000527072.5
CDS GCA 90 bp TCCAGGGGCTGCATGGCCGTGGCCCGCGGGCCCGTACACTCCAGCTaGCCGAACACGTCTTCCGGGTTTGCGATCGCGGAGGCGGTGGCG +
Preference number: 5 (lower is better)
Translates to: SRGCMAVARGPVHSS*PNTSSGFAIAEAVA
Trigger: CGCCACCGCCTCCGCGATCGCAAACCCGGAAGACGTGTTCGGGCAGCTGGAGTGTACGGGCCCGCGGGCCACGGCCATGCAGCCCCTGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393709.3
CDS CCA 90 bp CCCACTGCCTCTCCGCAGCCAGCGGGTCAGTCTCGGCTCCCCAGCTaGAGCGGGAACCAGACCTACCTCCAGGGGCTGCATGGCCGTGGC +
Preference number: 5 (lower is better)
Translates to: PTASPQPAGQSRLPS*SGNQTYLQGLHGRG
Trigger: GCCACGGCCATGCAGCCCCTGGAGGTAGGTCTGGTTCCCGCTCCAGCTGGGGAGCCGAGACTGACCCGCTGGCTGCGGAGAGGCAGTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000528785.1
CDS CCA 90 bp GCTCCCCAGCTGGAGCGGGAACCAGACCTACCTCCAGGGGCTGCATaGCCGTGGCCCGCGGGCCCGTACACTCCAGCTGCCCGAACACGT +
Preference number: 5 (lower is better)
Translates to: APQLEREPDLPPGAA*PWPAGPYTPAARTR
Trigger: ACGTGTTCGGGCAGCTGGAGTGTACGGGCCCGCGGGCCACGGCCATGCAGCCCCTGGAGGTAGGTCTGGTTCCCGCTCCAGCTGGGGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420578.7
ENST00000496961.5
CDS CCA 90 bp CAGCTGGAGCGGGAACCAGACCTACCTCCAGGGGCTGCATGGCCGTaGCCCGCGGGCCCGTACACTCCAGCTGCCCGAACACGTCTTCCG +
Preference number: 5 (lower is better)
Translates to: QLEREPDLPPGAAWP*PAGPYTPAARTRLP
Trigger: CGGAAGACGTGTTCGGGCAGCTGGAGTGTACGGGCCCGCGGGCCACGGCCATGCAGCCCCTGGAGGTAGGTCTGGTTCCCGCTCCAGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496961.5
CDS-3UTR CAA 90 bp GCACAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCAGTACGGCATTGCCTGCTaGCTCTTAGAGCAAGCTGGT +
Preference number: 5 (lower is better)
Translates to: AQPTQTAGCQHACPPAHQYGIAC*LLEQAG
Trigger: ACCAGCTTGCTCTAAGAGCAAGCAGGCAATGCCGTA...CTGGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CAA 90 bp GGGGGAGGGAAGTCCCTCCACAATCCGGCCTGCCAGGATGAAGGGCTCCTCCTGATCAGGGGACCTGTTTaGGTTCCTGGCCGGGACAGC +
Preference number: 5 (lower is better)
Translates to: GGGKSLHNPACQDEGLLLIRGPV*VPGRDS
Trigger: GCTGTCCCGGCCAGGAACCAAAACAGGTCCCCTGAT...CAGGAGGAGCCCTTCATCCTGGCAGGCCGGATTGTGGAGGGACTTCCCTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310611.8
ENST00000430195.2
CDS-3UTR CAA 90 bp TGGCACAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCGCCTCCTTTAGATGCTaGTCCTGGAGATGCAATCTC +
Preference number: 5 (lower is better)
Translates to: WHSPRKLPAVSTPARPPTASFRC*SWRCNL
Trigger: GAGATTGCATCTCCAGGACAAGCATCTAAAGGAGGC...GGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTGTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CAA 90 bp GCACAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCAGAAGGCGTTTGCTTCCTaGCTGAGGAGCCAAGTGAAT +
Preference number: 5 (lower is better)
Translates to: AQPTQTAGCQHACPPAHQKAFAS*LRSQVN
Trigger: ATTCACTTGGCTCCTCAGCAAGGAAGCAAACGCCTT...CTGGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CAA 90 bp GGGGAGGGAAGTCCCTCCACAATCCGGCCTGCCAGGATGAAGGGCTCCTCCTGGCCCTGCCCCACTTCCTaGGCCCTTATGAAATGCTTC +
Preference number: 5 (lower is better)
Translates to: GEGSPSTIRPARMKGSSWPCPTS*ALMKCF
Trigger: GAAGCATTTCATAAGGGCCAAGGAAGTGGGGCAGGG...CCAGGAGGAGCCCTTCATCCTGGCAGGCCGGATTGTGGAGGGACTTCCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CAA 90 bp CAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCCCGCCCGCCCACCAGCCCTCTGTCCCCATACTATaGAATCAAACCAACCTCCTT +
Preference number: 5 (lower is better)
Translates to: QPTQTAGCQHACPPAHQPSVPIL*NQTNLL
Trigger: AAGGAGGTTGGTTTGATTCAATAGTATGGGGACAGA...GGGCTGGTGGGCGGGCGGGCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CAA 90 bp CTGCCCCTGCTCCTGGGAACTGGAGCTCCAGCGCCTACATCCCAGGCTTCCCAGCAGGCAATAAGTGGTTaGCCCACAGCCACACCAGTG +
Preference number: 5 (lower is better)
Translates to: LPLLLGTGAPAPTSQASQQAISG*PTATPV
Trigger: CACTGGTGTGGCTGTGGGCAAACCACTTATTGCCTG...CTGGGAAGCCTGGGATGTAGGCGCTGGAGCTCCAGTTCCCAGGAGCAGGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS TCA 90 bp GAGGCAGAATGGTTCCTGGCCGGGACAGCGCTGTCAGAAAGATGGTaGAGCCCAAAGCTACCAGGTGCGCCAAGATCCCACTGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: EAEWFLAGTALSERW*SPKLPGAPRSHCLS
Trigger: GGAGAGGCAGTGGGATCTTGGCGCACCTGGTAGCTTTGGGCTTCACCATCTTTCTGACAGCGCTGTCCCGGCCAGGAACCATTCTGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527072.5
CDS-3UTR CAA 90 bp CGAGCCACCCTTGAGACCCTGGCTGCCCGGGGACAAAGGAGGCAGAGCCCACACTCAACAATAGCAGCTTaGGTTTCTGCAGTCCCTGGA +
Preference number: 5 (lower is better)
Translates to: RATLETLAARGQRRQSPHSTIAA*VSAVPG
Trigger: TCCAGGGACTGCAGAAACCAAAGCTGCTATTGTTGA...GTGTGGGCTCTGCCTCCTTTGTCCCCGGGCAGCCAGGGTCTCAAGGGTGGCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR CAA 90 bp CTGCCCCTGCTCCTGGGAACTGGAGCTCCAGCGCCTACATCCCAGGCTTCCCAGTCAACAATAGCAGCTTaGGTTTCTGCAGTCCCTGGA +
Preference number: 5 (lower is better)
Translates to: LPLLLGTGAPAPTSQASQSTIAA*VSAVPG
Trigger: TCCAGGGACTGCAGAAACCAAAGCTGCTATTGTTGA...CTGGGAAGCCTGGGATGTAGGCGCTGGAGCTCCAGTTCCCAGGAGCAGGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CAA 90 bp GCCGCACCTTTGATCTGGGCCTGGAACCATACTGAGTACATGCCCAGAAGCACCCCAGCAGCCTTCGGCTaGGTTAAGCCAATGCCCTCC +
Preference number: 5 (lower is better)
Translates to: AAPLIWAWNHTEYMPRSTPAAFG*VKPMPS
Trigger: GGAGGGCATTGGCTTAACCAAGCCGAAGGCTGCTGG...GGTGCTTCTGGGCATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGGTGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS TCA 90 bp AGAAAAGACTGGTTCCTGGCCGGGACAGCGCTGTCAGAAAGATGGTaGAGCCCAAAGCTACCAGGTGCGCCAAGATCCCACTGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: RKDWFLAGTALSERW*SPKLPGAPRSHCLS
Trigger: GGAGAGGCAGTGGGATCTTGGCGCACCTGGTAGCTTTGGGCTTCACCATCTTTCTGACAGCGCTGTCCCGGCCAGGAACCAGTCTTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000420578.7
ENST00000496961.5
ENST00000528785.1
CDS CCA 90 bp GGGAGCAGAAGAAGAACAGGGAGTGTTCAGGTGAGAAGAGTAGGATaGCTTCAGCCATGCAGAGGCAGAACTCCAGGGGCTGCATGGCCG +
Preference number: 5 (lower is better)
Translates to: GSRRRTGSVQVRRVG*LQPCRGRTPGAAWP
Trigger: CGGCCATGCAGCCCCTGGAGTTCTGCCTCTGCATGGCTGAAGCCATCCTACTCTTCTCACCTGAACACTCCCTGTTCTTCTTCTGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393709.3
CDS-3UTR CAA 90 bp TACCAGGCCGCACCTTTGATCTGGGCCTGGAACCATACTGAGTACATGCCCAGACCAGCAGCCTTCGGCTaGGTTAAGCCAATGCCCTCC +
Preference number: 5 (lower is better)
Translates to: YQAAPLIWAWNHTEYMPRPAAFG*VKPMPS
Trigger: GGAGGGCATTGGCTTAACCAAGCCGAAGGCTGCTGG...TCTGGGCATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGGTGCGGCCTGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS CCA 90 bp GGGAGCAGAAGAAGAACAGGGAGTGTTCAGGTGAGAAGAGTAGGATaGCTTCAGCCATGCAGAGGCAGAATGGTTCCTGGCCGGGACAGC +
Preference number: 5 (lower is better)
Translates to: GSRRRTGSVQVRRVG*LQPCRGRMVPGRDS
Trigger: GCTGTCCCGGCCAGGAACCATTCTGCCTCTGCATGGCTGAAGCCATCCTACTCTTCTCACCTGAACACTCCCTGTTCTTCTTCTGCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527072.5
CDS-3UTR CAA 90 bp AATAGACATCAGATGGCACAGCCCACGCAAACTGCCGGCTGTCAGCACGCCTGCGTGAGCTATGTCGACTaGCCTCAGCAGCACTTTCCT +
Preference number: 5 (lower is better)
Translates to: NRHQMAQPTQTAGCQHACVSYVD*PQQHFP
Trigger: AGGAAAGTGCTGCTGAGGCAAGTCGACATAGCTCAC...GCAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTGTGCCATCTGATGTCTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CAA 90 bp TGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCGCAGGAACTCACATTTCCATCAGGGGACCTGTTTaGGTTCCTGGCCGGGACAGC +
Preference number: 5 (lower is better)
Translates to: CSRQASHLDSAFAGTHISIRGPV*VPGRDS
Trigger: GCTGTCCCGGCCAGGAACCAAAACAGGTCCCCTGAT...GGAAATGTGAGTTCCTGCGAACGCTGAATCTAGGTGGGACGCTTGCCTTGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310611.8
ENST00000430195.2
CDS-3UTR CAA 90 bp GGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCCCCTGCCCCACTTCCTaGGCCCTTATGAAATGCTTC +
Preference number: 5 (lower is better)
Translates to: GFRIRLSITFHSYPVHLPPCPTS*ALMKCF
Trigger: GAAGCATTTCATAAGGGCCAAGGAAGTGGGGCAGGG...GGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCC
56% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CAA 90 bp AGGCAGCCCAGCCAGCAGCCTTCGGCTTGGTTAAGCCAATGCCCTCCTGCTTCTTGTTACACAGGATCTTaGTGCCAACCAGACACAGGA +
Preference number: 5 (lower is better)
Translates to: RQPSQQPSAWLSQCPPASCYTGS*CQPDTG
Trigger: TCCTGTGTCTGGTTGGCACAAAGATCCTGTGTAACA...AGAAGCAGGAGGGCATTGGCTTAACCAAGCCGAAGGCTGCTGGCTGGGCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS CCA 90 bp GGGAGCAGAAGAAGAACAGGGAGTGTTCAGGTGAGAAGAGTAGGATaGCTTCAGCCATGCAGAGGCAGAACTCAAGTGATCCACCCGCGT +
Preference number: 5 (lower is better)
Translates to: GSRRRTGSVQVRRVG*LQPCRGRTQVIHPR
Trigger: ACGCGGGTGGATCACTTGAGTTCTGCCTCTGCATGGCTGAAGCCATCCTACTCTTCTCACCTGAACACTCCCTGTTCTTCTTCTGCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369868.7
CDS-3UTR CAA 90 bp GTCTCTCATCAAGTAGAGGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATCCAGCAGCCTTCGGCTaGGTTAAGCCAATGCCCTCC +
Preference number: 5 (lower is better)
Translates to: VSHQVEASGSGSPSPSTHPAAFG*VKPMPS
Trigger: GGAGGGCATTGGCTTAACCAAGCCGAAGGCTGCTGG...ATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCCTCTACTTGATGAGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CAA 90 bp CACAGGTACCAGGCCGCACCTTTGATCTGGGCCTGGAACCATACTGAGTACATGTACGGCATTGCCTGCTaGCTCTTAGAGCAAGCTGGT +
Preference number: 5 (lower is better)
Translates to: HRYQAAPLIWAWNHTEYMYGIAC*LLEQAG
Trigger: ACCAGCTTGCTCTAAGAGCAAGCAGGCAATGCCGTA...CATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGGTGCGGCCTGGTACCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CAA 90 bp ATCACCAAAGGAACCATGATGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTATCAGGGGACCTGTTTaGGTTCCTGGCCGGGACAGC +
Preference number: 5 (lower is better)
Translates to: ITKGTMMFKASVPPRFSVIRGPV*VPGRDS
Trigger: GCTGTCCCGGCCAGGAACCAAAACAGGTCCCCTGAT...AACGCTGAATCTAGGTGGGACGCTTGCCTTGAACATCATGGTTCCTTTGGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000430195.2
CDS-3UTR CAA 90 bp CAACAGAGCCTAAGAGGACCATATCCCATAAATAAGACCCATGGGCTCTCTCCACCAGCAGCCTTCGGCTaGGTTAAGCCAATGCCCTCC +
Preference number: 5 (lower is better)
Translates to: QQSLRGPYPINKTHGLSPPAAFG*VKPMPS
Trigger: GGAGGGCATTGGCTTAACCAAGCCGAAGGCTGCTGG...TGGAGAGAGCCCATGGGTCTTATTTATGGGATATGGTCCTCTTAGGCTCTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CAA 90 bp AAGGTGAGGCTGGAGGACTTCCCCAGATACAGAGCTGCTCCCATTCCATACCAATACGGCATTGCCTGCTaGCTCTTAGAGCAAGCTGGT +
Preference number: 5 (lower is better)
Translates to: KVRLEDFPRYRAAPIPYQYGIAC*LLEQAG
Trigger: ACCAGCTTGCTCTAAGAGCAAGCAGGCAATGCCGTA...TTGGTATGGAATGGGAGCAGCTCTGTATCTGGGGAAGTCCTCCAGCCTCACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR CAA 90 bp CTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATTTTGACCCACTGAATTACCAGGCCGCACCTTaGATCTGGGCCTGGAACCAT +
Preference number: 5 (lower is better)
Translates to: LHHLPLIPSTSPHFDPLNYQAAP*IWAWNH
Trigger: ATGGTTCCAGGCCCAGATCAAAGGTGCGGCCTGGTA...ATTCAGTGGGTCAAAATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000533024.5
CDS-3UTR CAA 90 bp TACCAGGCCGCACCTTTGATCTGGGCCTGGAACCATACTGAGTACATGCCCAGATCAACAATAGCAGCTTaGGTTTCTGCAGTCCCTGGA +
Preference number: 5 (lower is better)
Translates to: YQAAPLIWAWNHTEYMPRSTIAA*VSAVPG
Trigger: TCCAGGGACTGCAGAAACCAAAGCTGCTATTGTTGA...TCTGGGCATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGGTGCGGCCTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR CAA 90 bp ATGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCGCAGGAACTCACATTTCCCCTGCCCCACTTCCTaGGCCCTTATGAAATGCTTC +
Preference number: 5 (lower is better)
Translates to: MFKASVPPRFSVRRNSHFPCPTS*ALMKCF
Trigger: GAAGCATTTCATAAGGGCCAAGGAAGTGGGGCAGGG...GAAATGTGAGTTCCTGCGAACGCTGAATCTAGGTGGGACGCTTGCCTTGAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CAA 90 bp TTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATTCCCTGCCCCACTTCCTaGGCCCTTATGAAATGCTTC +
Preference number: 5 (lower is better)
Translates to: FRIRLSITFHSYPVHLPIPCPTS*ALMKCF
Trigger: GAAGCATTTCATAAGGGCCAAGGAAGTGGGGCAGGG...AATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CAA 90 bp CTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATGTGAGCTATGTCGACTaGCCTCAGCAGCACTTTCCT +
Preference number: 5 (lower is better)
Translates to: LQDQALHHLPLIPSTSPHVSYVD*PQQHFP
Trigger: AGGAAAGTGCTGCTGAGGCAAGTCGACATAGCTCAC...ATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CAA 90 bp CTGGCTGTGATGAGGAAAGAGGAGATGCAGTCCCTGGATCAAAATCACCGCAGGAAGGCGTTTGCTTCCTaGCTGAGGAGCCAAGTGAAT +
Preference number: 5 (lower is better)
Translates to: LAVMRKEEMQSLDQNHRRKAFAS*LRSQVN
Trigger: ATTCACTTGGCTCCTCAGCAAGGAAGCAAACGCCTT...CCTGCGGTGATTTTGATCCAGGGACTGCATCTCCTCTTTCCTCATCACAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CAA 90 bp GATAGGGACGGAGTAAACCCATACTGCAGGTTTCCCAGCCCCCAAGCTGATGCATGTTACACAGGATCTTaGTGCCAACCAGACACAGGA +
Preference number: 5 (lower is better)
Translates to: DRDGVNPYCRFPSPQADACYTGS*CQPDTG
Trigger: TCCTGTGTCTGGTTGGCACAAAGATCCTGTGTAACA...TGCATCAGCTTGGGGGCTGGGAAACCTGCAGTATGGGTTTACTCCGTCCCTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR CAA 90 bp TCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATTTCAGGCAATAAGTGGTTaGCCCACAGCCACACCAGTG +
Preference number: 5 (lower is better)
Translates to: SGSGSPSPSTHTQYISPFQAISG*PTATPV
Trigger: CACTGGTGTGGCTGTGGGCAAACCACTTATTGCCTG...AAATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR CAA 90 bp CCAAGTGAATACCCCAGACATGAGCAGAATAAGGGAGGTGCGGGGAACAGAGGATCAACAATAGCAGCTTaGGTTTCTGCAGTCCCTGGA +
Preference number: 5 (lower is better)
Translates to: PSEYPRHEQNKGGAGNRGSTIAA*VSAVPG
Trigger: TCCAGGGACTGCAGAAACCAAAGCTGCTATTGTTGA...TCCTCTGTTCCCCGCACCTCCCTTATTCTGCTCATGTCTGGGGTATTCACTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CAA 90 bp GGCATAATGAGTTACGTGGAGAGGACACTTCTGCCCTTGCTGTCCCCATTCTGTGCCTCCTTTAGATGCTaGTCCTGGAGATGCAATCTC +
Preference number: 5 (lower is better)
Translates to: GIMSYVERTLLPLLSPFCASFRC*SWRCNL
Trigger: GAGATTGCATCTCCAGGACAAGCATCTAAAGGAGGC...ACAGAATGGGGACAGCAAGGGCAGAAGTGTCCTCTCCACGTAACTCATTATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CAA 90 bp GGTTTCTGCAGTCCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTAGCCTCCTTTAGATGCTaGTCCTGGAGATGCAATCTC +
Preference number: 5 (lower is better)
Translates to: GFCSPWTSQEVRKPDHFLASFRC*SWRCNL
Trigger: GAGATTGCATCTCCAGGACAAGCATCTAAAGGAGGC...TAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGGACTGCAGAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CAA 90 bp CAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCATTTTGACCCAAAGGCGTTTGCTTCCTaGCTGAGGAGCCAAGTGAAT +
Preference number: 5 (lower is better)
Translates to: QALHHLPLIPSTSPHFDPKAFAS*LRSQVN
Trigger: ATTCACTTGGCTCCTCAGCAAGGAAGCAAACGCCTT...TGGGTCAAAATGGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CAA 90 bp TTGGTTTCTGCAGTCCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTAAGGCGTTTGCTTCCTaGCTGAGGAGCCAAGTGAAT +
Preference number: 5 (lower is better)
Translates to: LVSAVPGPAKKCENLTTSKAFAS*LRSQVN
Trigger: ATTCACTTGGCTCCTCAGCAAGGAAGCAAACGCCTT...AGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGGACTGCAGAAACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CAA 90 bp ACATCCTCACCACCTCCCCCAAACCACAAGAAGTTCCTTAGATTCTGGCCAAGAGTTCTCTCTTCTGTTTaGGCCTGTGCCAAGCCCAAG +
Preference number: 5 (lower is better)
Translates to: TSSPPPPNHKKFLRFWPRVLSSV*ACAKPK
Trigger: CTTGGGCTTGGCACAGGCCAAAACAGAAGAGAGAAC...TCTTGGCCAGAATCTAAGGAACTTCTTGTGGTTTGGGGGAGGTGGTGAGGATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR CAA 90 bp CTGTTTTGGCCTGTGCCAAGCCCAAGGAAGTCCATGGCTGCATCTCTTCAACACTCTATGGCTGACAATTaGGCTGACAGGATGAAGCTG +
Preference number: 5 (lower is better)
Translates to: LFWPVPSPRKSMAASLQHSMADN*ADRMKL
Trigger: CAGCTTCATCCTGTCAGCCAAATTGTCAGCCATAGA...GTGTTGAAGAGATGCAGCCATGGACTTCCTTGGGCTTGGCACAGGCCAAAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR CAA 90 bp ACATCCTCACCACCTCCCCCAAACCACAAGAAGTTCCTTAGATTCTGGCCAAGATACTTACCTAAAGTCTaGACCGAAGGGCAGCCCTCC +
Preference number: 5 (lower is better)
Translates to: TSSPPPPNHKKFLRFWPRYLPKV*TEGQPS
Trigger: GGAGGGCTGCCCTTCGGTCAAGACTTTAGGTAAGTA...TCTTGGCCAGAATCTAAGGAACTTCTTGTGGTTTGGGGGAGGTGGTGAGGATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR CAA 90 bp TGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCGCAGGAACTCACATTTCCTCAACAATAGCAGCTTaGGTTTCTGCAGTCCCTGGA +
Preference number: 5 (lower is better)
Translates to: CSRQASHLDSAFAGTHISSTIAA*VSAVPG
Trigger: TCCAGGGACTGCAGAAACCAAAGCTGCTATTGTTGA...GGAAATGTGAGTTCCTGCGAACGCTGAATCTAGGTGGGACGCTTGCCTTGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR CAA 90 bp TACCAGGCCGCACCTTTGATCTGGGCCTGGAACCATACTGAGTACATGCCCAGAGAAACTTTGTTTTCTTaGGATCAGAAAAGCCCTGCC +
Preference number: 5 (lower is better)
Translates to: YQAAPLIWAWNHTEYMPRETLFS*DQKSPA
Trigger: GGCAGGGCTTTTCTGATCCAAAGAAAACAAAGTTTC...TCTGGGCATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGGTGCGGCCTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CAA 90 bp GGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACCCAGTACATCTCCCCTCTGTCCCCATACTATaGAATCAAACCAACCTCCTT +
Preference number: 5 (lower is better)
Translates to: GFRIRLSITFHSYPVHLPSVPIL*NQTNLL
Trigger: AAGGAGGTTGGTTTGATTCAATAGTATGGGGACAGA...GGGGAGATGTACTGGGTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CAA 90 bp CTCTCATCAAGTAGAGGCTTCAGGATCAGGCTCTCCATCACCTTCCACTCATACGCCTCCTTTAGATGCTaGTCCTGGAGATGCAATCTC +
Preference number: 5 (lower is better)
Translates to: LSSSRGFRIRLSITFHSYASFRC*SWRCNL
Trigger: GAGATTGCATCTCCAGGACAAGCATCTAAAGGAGGC...GTATGAGTGGAAGGTGATGGAGAGCCTGATCCTGAAGCCTCTACTTGATGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CAA 90 bp GTACCTAAGGTTGTACAACAGAGCCTAAGAGGACCATATCCCATAAATAAGACCTACCAGGCCGCACCTTaGATCTGGGCCTGGAACCAT +
Preference number: 5 (lower is better)
Translates to: VPKVVQQSLRGPYPINKTYQAAP*IWAWNH
Trigger: ATGGTTCCAGGCCCAGATCAAAGGTGCGGCCTGGTA...GGTCTTATTTATGGGATATGGTCCTCTTAGGCTCTGTTGTACAACCTTAGGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CAA 90 bp GGAACCATGATGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCGCAGGAACGAAACTTTGTTTTCTTaGGATCAGAAAAGCCCTGCC +
Preference number: 5 (lower is better)
Translates to: GTMMFKASVPPRFSVRRNETLFS*DQKSPA
Trigger: GGCAGGGCTTTTCTGATCCAAAGAAAACAAAGTTTC...GTTCCTGCGAACGCTGAATCTAGGTGGGACGCTTGCCTTGAACATCATGGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CAA 90 bp GCTACCCGGAGAGGAGGACCTGAATCTTCAGAAGACCAAGGACATCCACAACACGAAACTTTGTTTTCTTaGGATCAGAAAAGCCCTGCC +
Preference number: 5 (lower is better)
Translates to: ATRRGGPESSEDQGHPQHETLFS*DQKSPA
Trigger: GGCAGGGCTTTTCTGATCCAAAGAAAACAAAGTTTC...GTGTTGTGGATGTCCTTGGTCTTCTGAAGATTCAGGTCCTCCTCTCCGGGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CAA 90 bp CCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTAAATAGATCCCTTTCAACAATAGCAGCTTaGGTTTCTGCAGTCCCTGGA +
Preference number: 5 (lower is better)
Translates to: PWTSQEVRKPDHFLNRSLSTIAA*VSAVPG
Trigger: TCCAGGGACTGCAGAAACCAAAGCTGCTATTGTTGA...AAGGGATCTATTTAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR CAA 90 bp TGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTCGCAGGAACTCACATTTCCGAAACTTTGTTTTCTTaGGATCAGAAAAGCCCTGCC +
Preference number: 5 (lower is better)
Translates to: CSRQASHLDSAFAGTHISETLFS*DQKSPA
Trigger: GGCAGGGCTTTTCTGATCCAAAGAAAACAAAGTTTC...GGAAATGTGAGTTCCTGCGAACGCTGAATCTAGGTGGGACGCTTGCCTTGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CAA 90 bp TACCAGGCCGCACCTTTGATCTGGGCCTGGAACCATACTGAGTACATGCCCAGACATTTCCATTCAGATTaGGATACAGAAGCCATCTAT +
Preference number: 5 (lower is better)
Translates to: YQAAPLIWAWNHTEYMPRHFHSD*DTEAIY
Trigger: ATAGATGGCTTCTGTATCCAAATCTGAATGGAAATG...TCTGGGCATGTACTCAGTATGGTTCCAGGCCCAGATCAAAGGTGCGGCCTGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310611.8
ENST00000430195.2
CDS-3UTR CAA 90 bp CCTAAGGTTGTACAACAGAGCCTAAGAGGACCATATCCCATAAATAAGACCCATCAGGCAATAAGTGGTTaGCCCACAGCCACACCAGTG +
Preference number: 5 (lower is better)
Translates to: PKVVQQSLRGPYPINKTHQAISG*PTATPV
Trigger: CACTGGTGTGGCTGTGGGCAAACCACTTATTGCCTG...ATGGGTCTTATTTATGGGATATGGTCCTCTTAGGCTCTGTTGTACAACCTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR CAA 90 bp AGTCTGATGAGGACTACTTGGAGTTTGGAGTTCTCTCTTCTGTTTTGGCCTGTGCCAAGATGTGCAATTTaGTCTGCCATGCCTTGCAGC +
Preference number: 5 (lower is better)
Translates to: SLMRTTWSLEFSLLFWPVPRCAI*SAMPCS
Trigger: GCTGCAAGGCATGGCAGACAAAATTGCACATCTTGG...CACAGGCCAAAACAGAAGAGAGAACTCCAAACTCCAAGTAGTCCTCATCAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR CAA 90 bp ATCACCAAAGGAACCATGATGTTCAAGGCAAGCGTCCCACCTAGATTCAGCGTTTGTTCCCTACATATCTaGACCTTTGTCAGGTGCAAG +
Preference number: 5 (lower is better)
Translates to: ITKGTMMFKASVPPRFSVCSLHI*TFVRCK
Trigger: CTTGCACCTGACAAAGGTCAAGATATGTAGGGAACA...AACGCTGAATCTAGGTGGGACGCTTGCCTTGAACATCATGGTTCCTTTGGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR CAA 90 bp CATTTCCATTTTCTTCCTCGGCAAGTAGGATCTGGAAATCTGGTGCATGATCACTCAACAATAGCAGCTTaGGTTTCTGCAGTCCCTGGA +
Preference number: 5 (lower is better)
Translates to: HFHFLPRQVGSGNLVHDHSTIAA*VSAVPG
Trigger: TCCAGGGACTGCAGAAACCAAAGCTGCTATTGTTGA...GTGATCATGCACCAGATTTCCAGATCCTACTTGCCGAGGAAGAAAATGGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000533024.5
CDS-3UTR CAA 90 bp GTGCGAAAACCTGACCACTTCTTAAATAGATCCCTTATAGATCACCAAAGGAACGTGAGCTATGTCGACTaGCCTCAGCAGCACTTTCCT +
Preference number: 5 (lower is better)
Translates to: VRKPDHFLNRSLIDHQRNVSYVD*PQQHFP
Trigger: AGGAAAGTGCTGCTGAGGCAAGTCGACATAGCTCAC...GTTCCTTTGGTGATCTATAAGGGATCTATTTAAGAAGTGGTCAGGTTTTCGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CAA 90 bp AGCCAAGAAGTGCGAAAACCTGACCACTTCTTAAATAGATCCCTTATAGATCACTACGGCATTGCCTGCTaGCTCTTAGAGCAAGCTGGT +
Preference number: 5 (lower is better)
Translates to: SQEVRKPDHFLNRSLIDHYGIAC*LLEQAG
Trigger: ACCAGCTTGCTCTAAGAGCAAGCAGGCAATGCCGTA...GTGATCTATAAGGGATCTATTTAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CAA 90 bp AAAGTTGTTTTTCACTTCAGGAGGAACAACCAAGGTGACGAGGGGTGGAGCTACAGGACTACTTGGAGTTaGGAGTTCTCTCTTCTGTTT +
Preference number: 5 (lower is better)
Translates to: KVVFHFRRNNQGDEGWSYRTTWS*EFSLLF
Trigger: AAACAGAAGAGAGAACTCCAAACTCCAAGTAGTCCT...GTAGCTCCACCCCTCGTCACCTTGGTTGTTCCTCCTGAAGTGAAAAACAACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR CAA 90 bp GATGCACCTTTCATTTCATGTTACACAGGATCTTTGTGCCAACCAGACACAGGATGTTCCCTACATATCTaGACCTTTGTCAGGTGCAAG +
Preference number: 5 (lower is better)
Translates to: DAPFISCYTGSLCQPDTGCSLHI*TFVRCK
Trigger: CTTGCACCTGACAAAGGTCAAGATATGTAGGGAACA...TCCTGTGTCTGGTTGGCACAAAGATCCTGTGTAACATGAAATGAAAGGTGCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR CAA 90 bp CTATTTGGAAAGTTGTTTTTCACTTCAGGAGGAACAACCAAGGTGACGAGGGGTTCAGACAAGTCAACCTaGGCAGTCAGTGAAATGACA +
Preference number: 5 (lower is better)
Translates to: LFGKLFFTSGGTTKVTRGSDKST*AVSEMT
Trigger: TGTCATTTCACTGACTGCCAAGGTTGACTTGTCTGA...ACCCCTCGTCACCTTGGTTGTTCCTCCTGAAGTGAAAAACAACTTTCCAAATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528785.1
CDS-3UTR CAA 90 bp AAACCTGACCACTTCTTAAATAGATCCCTTATAGATCACCAAAGGAACCATGATGTGAGCTATGTCGACTaGCCTCAGCAGCACTTTCCT +
Preference number: 5 (lower is better)
Translates to: KPDHFLNRSLIDHQRNHDVSYVD*PQQHFP
Trigger: AGGAAAGTGCTGCTGAGGCAAGTCGACATAGCTCAC...ATCATGGTTCCTTTGGTGATCTATAAGGGATCTATTTAAGAAGTGGTCAGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CAA 90 bp CCCTGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTAAATAGATCCCTTCATTTCCATTCAGATTaGGATACAGAAGCCATCTAT +
Preference number: 5 (lower is better)
Translates to: PWTSQEVRKPDHFLNRSLHFHSD*DTEAIY
Trigger: ATAGATGGCTTCTGTATCCAAATCTGAATGGAAATG...AAGGGATCTATTTAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR CAA 90 bp TGGACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTAAATAGATCCCTTATATGTTCCCTACATATCTaGACCTTTGTCAGGTGCAAG +
Preference number: 5 (lower is better)
Translates to: WTSQEVRKPDHFLNRSLICSLHI*TFVRCK
Trigger: CTTGCACCTGACAAAGGTCAAGATATGTAGGGAACA...TATAAGGGATCTATTTAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR CAA 90 bp AGCCAAGAAGTGCGAAAACCTGACCACTTCTTAAATAGATCCCTTATAGATCACTGTTACACAGGATCTTaGTGCCAACCAGACACAGGA +
Preference number: 5 (lower is better)
Translates to: SQEVRKPDHFLNRSLIDHCYTGS*CQPDTG
Trigger: TCCTGTGTCTGGTTGGCACAAAGATCCTGTGTAACA...GTGATCTATAAGGGATCTATTTAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS-3UTR CAA 90 bp ACCAGCCAAGAAGTGCGAAAACCTGACCACTTCTTAAATAGATCCCTTATAGATTCTGTCCCCATACTATaGAATCAAACCAACCTCCTT +
Preference number: 5 (lower is better)
Translates to: TSQEVRKPDHFLNRSLIDSVPIL*NQTNLL
Trigger: AAGGAGGTTGGTTTGATTCAATAGTATGGGGACAGA...ATCTATAAGGGATCTATTTAAGAAGTGGTCAGGTTTTCGCACTTCTTGGCTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
CDS-3UTR CAA 90 bp CCCAGTACATCTCCCCATTTTGACCCACTGAATTATTCCTCAACAATAGCAGCTCATTTCCATTCAGATTaGGATACAGAAGCCATCTAT +
Preference number: 5 (lower is better)
Translates to: PSTSPHFDPLNYSSTIAAHFHSD*DTEAIY
Trigger: ATAGATGGCTTCTGTATCCAAATCTGAATGGAAATG...AGCTGCTATTGTTGAGGAATAATTCAGTGGGTCAAAATGGGGAGATGTACTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000430195.2
CDS GCA 72 bp CCAGCTGGAGCGGGAACCAGACCTACCTCCAGGGGCTaGATGGCCGTGGCCCGCGGGCCCGTACACTCCAGC +
Preference number: 6 (lower is better)
Translates to: PAGAGTRPTSRG*MAVARGPVHSS
Trigger: GCTGGAGTGTACGGGCCCGCGGGCCACGGCCATGCAGCCCCTGGAGGTAGGTCTGGTTCCCGCTCCAGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000496961.5
ENST00000527072.5
ENST00000528785.1
CDS CCA 72 bp CTGGAGCGGGAACCAGACCTACCTCCAGGGGCTGCATaGCCGTGGCCCGCGGGCCCGTACACTCCAGCTGCC +
Preference number: 6 (lower is better)
Translates to: LEREPDLPPGAA*PWPAGPYTPAA
Trigger: GGCAGCTGGAGTGTACGGGCCCGCGGGCCACGGCCATGCAGCCCCTGGAGGTAGGTCTGGTTCCCGCTCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000496961.5
ENST00000527072.5
ENST00000528785.1
CDS CCA 72 bp CGGGAACCAGACCTACCTCCAGGGGCTGCATGGCCGTaGCCCGCGGGCCCGTACACTCCAGCTGCCCGAACA +
Preference number: 6 (lower is better)
Translates to: REPDLPPGAAWP*PAGPYTPAART
Trigger: TGTTCGGGCAGCTGGAGTGTACGGGCCCGCGGGCCACGGCCATGCAGCCCCTGGAGGTAGGTCTGGTTCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000496961.5
CDS GCA 72 bp TGCATGGCCGTGGCCCGCGGGCCCGTACACTCCAGCTaGCCGAACACGTCTTCCGGGTTTGCGATCGCGGAG +
Preference number: 6 (lower is better)
Translates to: CMAVARGPVHSS*PNTSSGFAIAE
Trigger: CTCCGCGATCGCAAACCCGGAAGACGTGTTCGGGCAGCTGGAGTGTACGGGCCCGCGGGCCACGGCCATGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393709.3
CDS CCA 72 bp ACAGGGTGCCAGGAGAAAAGACCTCCAGGGGCTGCATaGCCGTGGCCCGCGGGCCCGTACACTCCAGCTGCC +
Preference number: 6 (lower is better)
Translates to: TGCQEKRPPGAA*PWPAGPYTPAA
Trigger: GGCAGCTGGAGTGTACGGGCCCGCGGGCCACGGCCATGCAGCCCCTGGAGGTCTTTTCTCCTGGCACCCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533024.5
CDS CCA 72 bp TCTCCGCAGCCAGCGGGTCAGTCTCGGCTCCCCAGCTaGAGCGGGAACCAGACCTACCTCCAGGGGCTGCAT +
Preference number: 6 (lower is better)
Translates to: SPQPAGQSRLPS*SGNQTYLQGLH
Trigger: ATGCAGCCCCTGGAGGTAGGTCTGGTTCCCGCTCCAGCTGGGGAGCCGAGACTGACCCGCTGGCTGCGGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000528785.1
CDS CCA 72 bp TGCCAGGAGAAAAGACCTCCAGGGGCTGCATGGCCGTaGCCCGCGGGCCCGTACACTCCAGCTGCCCGAACA +
Preference number: 6 (lower is better)
Translates to: CQEKRPPGAAWP*PAGPYTPAART
Trigger: TGTTCGGGCAGCTGGAGTGTACGGGCCCGCGGGCCACGGCCATGCAGCCCCTGGAGGTCTTTTCTCCTGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533024.5
CDS TCA 72 bp TGGTTCCTGGCCGGGACAGCGCTGTCAGAAAGATGGTaGAGCCCAAAGCTACCAGGTGCGCCAAGATCCCAC +
Preference number: 6 (lower is better)
Translates to: WFLAGTALSERW*SPKLPGAPRSH
Trigger: GTGGGATCTTGGCGCACCTGGTAGCTTTGGGCTTCACCATCTTTCTGACAGCGCTGTCCCGGCCAGGAACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000310611.8
ENST00000369868.7
ENST00000420578.7
ENST00000430195.2
ENST00000496961.5
ENST00000527072.5
ENST00000528785.1
CDS GCA 72 bp ATGCAGAGGCAGAACGCCAAGGCCATGAATACAGGGTaGCAGGAGAAAAGACCTCCAGGGGCTGCATGGCCG +
Preference number: 6 (lower is better)
Translates to: MQRQNAKAMNTG*QEKRPPGAAWP
Trigger: CGGCCATGCAGCCCCTGGAGGTCTTTTCTCCTGGCACCCTGTATTCATGGCCTTGGCGTTCTGCCTCTGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533024.5
CDS GCA 72 bp AGTGTTCAGGTGAGAAGAGTAGGATGGCTTCAGCCATaGAGAGGCAGAACTCCAGGGGCTGCATGGCCGTGG +
Preference number: 6 (lower is better)
Translates to: SVQVRRVGWLQP*RGRTPGAAWPW
Trigger: CCACGGCCATGCAGCCCCTGGAGTTCTGCCTCTGCATGGCTGAAGCCATCCTACTCTTCTCACCTGAACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393709.3
CDS GCA 72 bp ATGCAGAGGCAGAACGCCAAGGCCATGAATACAGGGTaGCAGGAGAAAAGACTGGTTCCTGGCCGGGACAGC +
Preference number: 6 (lower is better)
Translates to: MQRQNAKAMNTG*QEKRLVPGRDS
Trigger: GCTGTCCCGGCCAGGAACCAGTCTTTTCTCCTGGCACCCTGTATTCATGGCCTTGGCGTTCTGCCTCTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420578.7
ENST00000528785.1
CDS GCA 72 bp TGCTCTCATACATCCGCCAAGGCCATGAATACAGGGTaGCAGGAGAAAAGACTGGTTCCTGGCCGGGACAGC +
Preference number: 6 (lower is better)
Translates to: CSHTSAKAMNTG*QEKRLVPGRDS
Trigger: GCTGTCCCGGCCAGGAACCAGTCTTTTCTCCTGGCACCCTGTATTCATGGCCTTGGCGGATGTATGAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496961.5
CDS GCA 72 bp AGTGTTCAGGTGAGAAGAGTAGGATGGCTTCAGCCATaGAGAGGCAGAATGGTTCCTGGCCGGGACAGCGCT +
Preference number: 6 (lower is better)
Translates to: SVQVRRVGWLQP*RGRMVPGRDSA
Trigger: AGCGCTGTCCCGGCCAGGAACCATTCTGCCTCTGCATGGCTGAAGCCATCCTACTCTTCTCACCTGAACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527072.5
CDS GCA 72 bp AGTGTTCAGGTGAGAAGAGTAGGATGGCTTCAGCCATaGAGAGGCAGAACTCAAGTGATCCACCCGCGTCGG +
Preference number: 6 (lower is better)
Translates to: SVQVRRVGWLQP*RGRTQVIHPRR
Trigger: CCGACGCGGGTGGATCACTTGAGTTCTGCCTCTGCATGGCTGAAGCCATCCTACTCTTCTCACCTGAACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369868.7
CDS TCA 72 bp AGAGAGCCAGTAAGCCTCATGTCTGGCTTGGAGGCCTaGGAAAAAGGAGGTGCTCTCATACATCCGCCAAGG +
Preference number: 6 (lower is better)
Translates to: REPVSLMSGLEA*EKGGALIHPPR
Trigger: CCTTGGCGGATGTATGAGAGCACCTCCTTTTTCTCAGGCCTCCAAGCCAGACATGAGGCTTACTGGCTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430195.2
ENST00000496961.5
CDS GCA 72 bp CCTCATGTCTGGCTTGGAGGCCTGAGAAAAAGGAGGTaGTCTCATACATCCGCCAAGGCCATGAATACAGGG +
Preference number: 6 (lower is better)
Translates to: PHVWLGGLRKRR*SHTSAKAMNTG
Trigger: CCCTGTATTCATGGCCTTGGCGGATGTATGAGAGCACCTCCTTTTTCTCAGGCCTCCAAGCCAGACATGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430195.2
ENST00000496961.5
CDS CCA 72 bp AGAAGAACAGGGAGTGTTCAGGTGAGAAGAGTAGGATaGCTTCAGCCATGCAGAGGCAGAACGCCAAGGCCA +
Preference number: 6 (lower is better)
Translates to: RRTGSVQVRRVG*LQPCRGRTPRP
Trigger: TGGCCTTGGCGTTCTGCCTCTGCATGGCTGAAGCCATCCTACTCTTCTCACCTGAACACTCCCTGTTCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310611.8
ENST00000420578.7
ENST00000528785.1
ENST00000533024.5
CDS CCA 72 bp AGAAGAACAGGGAGTGTTCAGGTGAGAAGAGTAGGATaGCTTCAGCCATGCAGAGGCAGAACTCCAGGGGCT +
Preference number: 6 (lower is better)
Translates to: RRTGSVQVRRVG*LQPCRGRTPGA
Trigger: AGCCCCTGGAGTTCTGCCTCTGCATGGCTGAAGCCATCCTACTCTTCTCACCTGAACACTCCCTGTTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393709.3
CDS CCA 72 bp AGAAGAACAGGGAGTGTTCAGGTGAGAAGAGTAGGATaGCTTCAGCCATGCAGAGGCAGAATGGTTCCTGGC +
Preference number: 6 (lower is better)
Translates to: RRTGSVQVRRVG*LQPCRGRMVPG
Trigger: GCCAGGAACCATTCTGCCTCTGCATGGCTGAAGCCATCCTACTCTTCTCACCTGAACACTCCCTGTTCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527072.5
CDS CCA 72 bp AGAAGAACAGGGAGTGTTCAGGTGAGAAGAGTAGGATaGCTTCAGCCATGCAGAGGCAGAACTCAAGTGATC +
Preference number: 6 (lower is better)
Translates to: RRTGSVQVRRVG*LQPCRGRTQVI
Trigger: GATCACTTGAGTTCTGCCTCTGCATGGCTGAAGCCATCCTACTCTTCTCACCTGAACACTCCCTGTTCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369868.7
CDS CAA 72 bp ATTCTGGCCAAGATGTGCAATTTTGTCTGCCATGCCTaGCAGCACTTACCCTGGCTCCTCTTAGGTAGCAAT +
Preference number: 6 (lower is better)
Translates to: ILAKMCNFVCHA*QHLPWLLLGSN
Trigger: ATTGCTACCTAAGAGGAGCCAGGGTAAGTGCTGCAAGGCATGGCAGACAAAATTGCACATCTTGGCCAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528785.1