RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CYB561A3 (Homo sapiens)

Ensembl gene IDs: ENSG00000162144

Ensembl transcript IDs: ENST00000294072.9, ENST00000426130.6, ENST00000447532.6, ENST00000535152.1, ENST00000535177.1, ENST00000536687.1, ENST00000536915.5, ENST00000537364.5, ENST00000537680.5, ENST00000538263.5, ENST00000539128.5, ENST00000539890.1, ENST00000540139.5, ENST00000540317.5, ENST00000540755.5, ENST00000542361.5, ENST00000542411.5, ENST00000544118.5, ENST00000545361.5, ENST00000546151.5

Found 631 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGATGTAGAGCACCAGCAGCCCAAAGGCCACCACCAGCATCCCGGTaGTGTTGGCAAAGACCGCCTCACTGGGCAGGCTGTGGTATGGCC +
Preference number: 1 (lower is better)
Translates to: GCRAPAAQRPPPASR*CWQRPPHWAGCGMA
Trigger: GGCCATACCACAGCCTGCCCAGTGAGGCGGTCTTTGCCAACAGCACCGGGATGCTGGTGGTGGCCTTTGGGCTGCTGGTGCTCTACATCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540755.5
ENST00000546151.5
3UTR GCA 90 bp GCAGGAGTCACACCAGGCCCAAGCTGTTCAGACAGACCCCCAGCCTaGAGGGTGGTCCCCATCCAAGCCACCAAATCCCTCAGGGAAGCC +
Preference number: 1 (lower is better)
Translates to: AGVTPGPSCSDRPPA*RVVPIQATKSLREA
Trigger: GGCTTCCCTGAGGGATTTGGTGGCTTGGATGGGGACCACCCTGCAGGCTGGGGGTCTGTCTGAACAGCTTGGGCCTGGTGTGACTCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR CCA 90 bp GATCCTTCTCTAGACCTGGCCCTGTCCCACCCTGGAATGTGGGACTaGAACCCATACCTGTCTGTCGGTCAGGATCCCCGGCTCTGGGCG +
Preference number: 1 (lower is better)
Translates to: DPSLDLALSHPGMWD*NPYLSVGQDPRLWA
Trigger: CGCCCAGAGCCGGGGATCCTGACCGACAGACAGGTATGGGTTCCAGTCCCACATTCCAGGGTGGGACAGGGCCAGGTCTAGAGAAGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR TCA 90 bp CCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTaGAACCAGCCGGGAGCCCTGGGAAGAGCAGAGCTTCTGAGGGGA +
Preference number: 1 (lower is better)
Translates to: PRQEVWAQHWKKVAC*NQPGALGRAELLRG
Trigger: TCCCCTCAGAAGCTCTGCTCTTCCCAGGGCTCCCGGCTGGTTTCAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
3UTR TCA 90 bp GCAAGAGCGGCCAGAGCGAGGAGGACCTCGTGTGAATGGAGGACCTaGGAGGCTGACGCCAAGGAGTGCAGAAGCCAAAGCCACCAAGGA +
Preference number: 1 (lower is better)
Translates to: ARAARARRTSCEWRT*EADAKECRSQSHQG
Trigger: TCCTTGGTGGCTTTGGCTTCTGCACTCCTTGGCGTCAGCCTCTCAGGTCCTCCATTCACACGAGGTCCTCCTCGCTCTGGCCGCTCTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
3UTR CCA 90 bp GTGGGAGATCCTTCTCTAGACCTGGCCCTGTCCCACCCTGGAATGTaGGACTGGAACCCATACCTGTCTGTCGGTCAGGATCCCCGGCTC +
Preference number: 1 (lower is better)
Translates to: VGDPSLDLALSHPGM*DWNPYLSVGQDPRL
Trigger: GAGCCGGGGATCCTGACCGACAGACAGGTATGGGTTCCAGTCCCACATTCCAGGGTGGGACAGGGCCAGGTCTAGAGAAGGATCTCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR TCA 90 bp GAGGCTGGGGTGGACGTTGGCCTGATGTTGCCAGGAGTAGGATGCTaGTGCTGCCAGAGAGTAGGTGGGCTCCAAACCCCAGGCTTCTCA +
Preference number: 1 (lower is better)
Translates to: EAGVDVGLMLPGVGC*CCQRVGGLQTPGFS
Trigger: TGAGAAGCCTGGGGTTTGGAGCCCACCTACTCTCTGGCAGCATCAGCATCCTACTCCTGGCAACATCAGGCCAACGTCCACCCCAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
3UTR GCA 90 bp CCTGAGCCTGGTACACACCCCGTCTCCCTACATCCCATCAAGACCTaGTCTGAGCACTCAGCTGGTCACCAGGCACCCATCCCACTAGAC +
Preference number: 1 (lower is better)
Translates to: PEPGTHPVSLHPIKT*SEHSAGHQAPIPLD
Trigger: GTCTAGTGGGATGGGTGCCTGGTGACCAGCTGAGTGCTCAGAGCAGGTCTTGATGGGATGTAGGGAGACGGGGTGTGTACCAGGCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR GCA 90 bp TGTCTCCCAATGGACAGACTGGGGAGTCCCAGCATTTCACTGGGATaGGCTGGTTTGGGACCAGTGCTCCCCATCAGCCACCCTAACTCC +
Preference number: 1 (lower is better)
Translates to: CLPMDRLGSPSISLG*AGLGPVLPISHPNS
Trigger: GGAGTTAGGGTGGCTGATGGGGAGCACTGGTCCCAAACCAGCGCATCCCAGTGAAATGCTGGGACTCCCCAGTCTGTCCATTGGGAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR CCA 90 bp GCCTTTCGTGGGAGATCCTTCTCTAGACCTGGCCCTGTCCCACCCTaGAATGTGGGACTGGAACCCATACCTGTCTGTCGGTCAGGATCC +
Preference number: 1 (lower is better)
Translates to: AFRGRSFSRPGPVPP*NVGLEPIPVCRSGS
Trigger: GGATCCTGACCGACAGACAGGTATGGGTTCCAGTCCCACATTCCAGGGTGGGACAGGGCCAGGTCTAGAGAAGGATCTCCCACGAAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR CCA 90 bp TGGACAGACTGGGGAGTCCCAGCATTTCACTGGGATGCGCTGGTTTaGGACCAGTGCTCCCCATCAGCCACCCTAACTCCACCCTCAAGT +
Preference number: 1 (lower is better)
Translates to: WTDWGVPAFHWDALV*DQCSPSATLTPPSS
Trigger: ACTTGAGGGTGGAGTTAGGGTGGCTGATGGGGAGCACTGGTCCCAAACCAGCGCATCCCAGTGAAATGCTGGGACTCCCCAGTCTGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR TCA 90 bp AGCTGGTCATGGGACCCAGGTGCCTGGAGGACATCCCAGTGGCTTTaGAGGCTCCAGCCAGTCAAGACGGTCAATATTAGCCCTTCTGCC +
Preference number: 1 (lower is better)
Translates to: SWSWDPGAWRTSQWL*RLQPVKTVNISPSA
Trigger: GGCAGAAGGGCTAATATTGACCGTCTTGACTGGCTGGAGCCTTCAAAGCCACTGGGATGTCCTCCAGGCACCTGGGTCCCATGACCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
3UTR CCA 90 bp TGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTaGACTGCACTTGAGTCCCAGCTCTTCACCACATCCCTAGGAGTC +
Preference number: 1 (lower is better)
Translates to: WGKWTDTSPPSCFTP*TALESQLFTTSLGV
Trigger: GACTCCTAGGGATGTGGTGAAGAGCTGGGACTCAAGTGCAGTCCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
3UTR GCA 90 bp TGGGGAGTCCCAGCATTTCACTGGGATGCGCTGGTTTGGGACCAGTaGTCCCCATCAGCCACCCTAACTCCACCCTCAAGTTACTTGGTT +
Preference number: 1 (lower is better)
Translates to: WGVPAFHWDALVWDQ*SPSATLTPPSSYLV
Trigger: AACCAAGTAACTTGAGGGTGGAGTTAGGGTGGCTGATGGGGAGCACTGGTCCCAAACCAGCGCATCCCAGTGAAATGCTGGGACTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR CCA 90 bp AATTCTGTCTCCCAATGGACAGACTGGGGAGTCCCAGCATTTCACTaGGATGCGCTGGTTTGGGACCAGTGCTCCCCATCAGCCACCCTA +
Preference number: 1 (lower is better)
Translates to: NSVSQWTDWGVPAFH*DALVWDQCSPSATL
Trigger: TAGGGTGGCTGATGGGGAGCACTGGTCCCAAACCAGCGCATCCCAGTGAAATGCTGGGACTCCCCAGTCTGTCCATTGGGAGACAGAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR CCA 90 bp CTCCAGCCAGTCAAGACGGTCAATATTAGCCCTTCTGCCAACATCTaGCAATGTGAGGCTGGGGTGGACGTTGGCCTGATGTTGCCAGGA +
Preference number: 1 (lower is better)
Translates to: LQPVKTVNISPSANI*QCEAGVDVGLMLPG
Trigger: TCCTGGCAACATCAGGCCAACGTCCACCCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTTGACTGGCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
3UTR GCA 90 bp ATCAGCCACCCTAACTCCACCCTCAAGTTACTTGGTTTCCTGCTGTaGCACAGGGTAAGTCTTCTTGTCAAGGCCCCAGCCTTTCGTGGG +
Preference number: 1 (lower is better)
Translates to: ISHPNSTLKLLGFLL*HRVSLLVKAPAFRG
Trigger: CCCACGAAAGGCTGGGGCCTTGACAAGAAGACTTACCCTGTGGCACAGCAGGAAACCAAGTAACTTGAGGGTGGAGTTAGGGTGGCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR CCA 90 bp AAACTCGAGCTTCATAAACCAGTGAAATGCCTACCCCTATGGAGATaGGGAGCTGGTCATGGGACCCAGGTGCCTGGAGGACATCCCAGT +
Preference number: 1 (lower is better)
Translates to: KLELHKPVKCLPLWR*GAGHGTQVPGGHPS
Trigger: ACTGGGATGTCCTCCAGGCACCTGGGTCCCATGACCAGCTCCCCATCTCCATAGGGGTAGGCATTTCACTGGTTTATGAAGCTCGAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
3UTR TCA 90 bp GACGGACACCTCACCTCCCTCATGTTTCACACCGTGGACTGCACTTaGGTCCCAGCTCTTCACCACATCCCTAGGAGTCTTAAGAGGAAA +
Preference number: 1 (lower is better)
Translates to: DGHLTSLMFHTVDCT*VPALHHIPRSLKRK
Trigger: TTTCCTCTTAAGACTCCTAGGGATGTGGTGAAGAGCTGGGACTCAAGTGCAGTCCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
3UTR CCA 90 bp AGCATCCCGGTGCTGTTGGCAAAGACCGCCTCACTGGGCAGGCTGTaGTATGGCCTGGTGGTGTTTTTCAAACTGAAGAAAAGCTTCTCA +
Preference number: 1 (lower is better)
Translates to: SIPVLLAKTASLGRL*YGLVVFFKLKKSFS
Trigger: TGAGAAGCTTTTCTTCAGTTTGAAAAACACCACCAGGCCATACCACAGCCTGCCCAGTGAGGCGGTCTTTGCCAACAGCACCGGGATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540755.5
3UTR CCA 90 bp AGCATCCCGGTGCTGTTGGCAAAGACCGCCTCACTGGGCAGGCTGTaGTATGGCCTGGTGGTGTTTTTCCTGAAGATGACAAAACAATGT +
Preference number: 1 (lower is better)
Translates to: SIPVLLAKTASLGRL*YGLVVFFLKMTKQC
Trigger: ACATTGTTTTGTCATCTTCAGGAAAAACACCACCAGGCCATACCACAGCCTGCCCAGTGAGGCGGTCTTTGCCAACAGCACCGGGATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR TCA 90 bp CCTGTAGTCCTAGCTTACTTAGGAGGCTACATTGGGAAGATCGCTTaGGTGCAGGAGTTTGATGCTGCAGTGAGCTATGGTCACACCATT +
Preference number: 1 (lower is better)
Translates to: PVVLAYLGGYIGKIA*VQEFDAAVSYGHTI
Trigger: AATGGTGTGACCATAGCTCACTGCAGCATCAAACTCCTGCACTCAAGCGATCTTCCCAATGTAGCCTCCTAAGTAAGCTAGGACTACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR GCA 90 bp TTCTTAACATATTTAATGAAACTCGAGCTTCATAAACCAGTGAAATaGCTACCCCTATGGAGATGGGGAGCTGGTCATGGGACCCAGGTG +
Preference number: 1 (lower is better)
Translates to: FLTYLMKLELHKPVK*LPLWRWGAGHGTQV
Trigger: CACCTGGGTCCCATGACCAGCTCCCCATCTCCATAGGGGTAGGCATTTCACTGGTTTATGAAGCTCGAGTTTCATTAAATATGTTAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
3UTR-3UTR GCA 90 bp AGCGGTCAGCTCCTCAGCAGAAGCTGCGTGGGCCGCCACTCCCCCTTTCTGCAACTCCTCAGCAGAAGCTaGGTGGGCCGCCACTCCCCC +
Preference number: 2 (lower is better)
Translates to: SGQLLSRSCVGRHSPFLQLLSRS*VGRHSP
Trigger: GGGGGAGTGGCGGCCCACGCAGCTTCTGCTGAGGAG...TTGCAGAAAGGGGGAGTGGCGGCCCACGCAGCTTCTGCTGAGGAGCTGACCGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000546151.5
3UTR-3UTR GCA 90 bp TCAGCAGAAGCTGCGTGGGCCGCCACTCCCCCTTTCTGCAATCACCCCATGATGCTCCTCAGCAGAAGCTaGGTGGGCCGCCACTCCCCC +
Preference number: 2 (lower is better)
Translates to: SAEAAWAATPPFCNHPMMLLSRS*VGRHSP
Trigger: GGGGGAGTGGCGGCCCACGCAGCTTCTGCTGAGGAG...CATCATGGGGTGATTGCAGAAAGGGGGAGTGGCGGCCCACGCAGCTTCTGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000546151.5
3UTR-3UTR GCA 90 bp GAAGGATGTAGAGCACCAGCAGCCCAAAGGCCACCACCAGCATCCCGGTGCTGTCTCCTCAGCAGAAGCTaGGTGGGCCGCCACTCCCCC +
Preference number: 2 (lower is better)
Translates to: EGCRAPAAQRPPPASRCCLLSRS*VGRHSP
Trigger: GGGGGAGTGGCGGCCCACGCAGCTTCTGCTGAGGAG...ACAGCACCGGGATGCTGGTGGTGGCCTTTGGGCTGCTGGTGCTCTACATCCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540755.5
ENST00000546151.5
3UTR-3UTR TCA 90 bp TCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTGCTGAAGAGCAGAGCTTCTaGGGGGAGCACAGGCTGCAC +
Preference number: 2 (lower is better)
Translates to: SEGSTGCTTRSSWEPLPAEEQSF*GEHRLH
Trigger: GTGCAGCCTGTGCTCCCCTCAGAAGCTCTGCTCTTC...AGCAGGAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000539890.1
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
3UTR-3UTR TCA 90 bp TCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTGCTAAGAAAGTCGCCTGCTaGAACCAGCCGGGAGCCCTG +
Preference number: 2 (lower is better)
Translates to: SEGSTGCTTRSSWEPLPAKKVAC*NQPGAL
Trigger: CAGGGCTCCCGGCTGGTTTCAGCAGGCGACTTTCTT...AGCAGGAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000539890.1
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
3UTR-3UTR GCA 90 bp GGCAGGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCGAGGGGAGCACAGGCTaGACCACCAGGAGCTCTTGG +
Preference number: 2 (lower is better)
Translates to: GRPAPRQEVWAQHWKKVAEGSTG*TTRSSW
Trigger: CCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTC...GGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
3UTR-3UTR GCA 90 bp AAGGCCACCACCAGCATCCCGGTGCTGTTGGCAAAGACCGCCTCACTGGGCAGGCCACCAGCATCCCGGTaGTGTTGGCAAAGACCGCCT +
Preference number: 2 (lower is better)
Translates to: KATTSIPVLLAKTASLGRPPASR*CWQRPP
Trigger: AGGCGGTCTTTGCCAACAGCACCGGGATGCTGGTGG...CCTGCCCAGTGAGGCGGTCTTTGCCAACAGCACCGGGATGCTGGTGGTGGCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540755.5
ENST00000546151.5
3UTR-3UTR CCA 90 bp AGCGGTCAGCTCCTCAGCAGAAGCTGCGTGGGCCGCCACTCCCCCTTTCTGCAAACCACCAGGAGCTCTTaGGAGCCCCTTCCTGCTGCT +
Preference number: 2 (lower is better)
Translates to: SGQLLSRSCVGRHSPFLQTTRSS*EPLPAA
Trigger: AGCAGCAGGAAGGGGCTCCCAAGAGCTCCTGGTGGT...TTGCAGAAAGGGGGAGTGGCGGCCCACGCAGCTTCTGCTGAGGAGCTGACCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000546151.5
3UTR-3UTR CCA 90 bp CTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTGACCACCAGGAGCTCTTaGGAGCCCCTTCCTGCTGCT +
Preference number: 2 (lower is better)
Translates to: LLRGAQAAPPGALGSPFLTTRSS*EPLPAA
Trigger: AGCAGCAGGAAGGGGCTCCCAAGAGCTCCTGGTGGT...CAGGAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000539890.1
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
3UTR-3UTR TCA 90 bp CCAGAGCGAGGAGGACCTCGTGTGAATGGAGGACCTGAGAGGCTGACGCCAAGGGAAGAGCAGAGCTTCTaGGGGGAGCACAGGCTGCAC +
Preference number: 2 (lower is better)
Translates to: PERGGPRVNGGPERLTPREEQSF*GEHRLH
Trigger: GTGCAGCCTGTGCTCCCCTCAGAAGCTCTGCTCTTC...CCTTGGCGTCAGCCTCTCAGGTCCTCCATTCACACGAGGTCCTCCTCGCTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
3UTR-3UTR TCA 90 bp GGATGTAGAGCACCAGCAGCCCAAAGGCCACCACCAGCATCCCGGTGCTGTTGGGAAGAGCAGAGCTTCTaGGGGGAGCACAGGCTGCAC +
Preference number: 2 (lower is better)
Translates to: GCRAPAAQRPPPASRCCWEEQSF*GEHRLH
Trigger: GTGCAGCCTGTGCTCCCCTCAGAAGCTCTGCTCTTC...CCAACAGCACCGGGATGCTGGTGGTGGCCTTTGGGCTGCTGGTGCTCTACATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540755.5
ENST00000546151.5
3UTR-3UTR GCA 90 bp GAGGGCAGGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGAGGGGAGCACAGGCTaGACCACCAGGAGCTCTTGG +
Preference number: 2 (lower is better)
Translates to: EGRPAPRQEVWAQHWKKVEGSTG*TTRSSW
Trigger: CCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTC...GACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCCTGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
3UTR-3UTR GCA 90 bp GGCAGGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCCCACCAGCATCCCGGTaGTGTTGGCAAAGACCGCCT +
Preference number: 2 (lower is better)
Translates to: GRPAPRQEVWAQHWKKVAPPASR*CWQRPP
Trigger: AGGCGGTCTTTGCCAACAGCACCGGGATGCTGGTGG...GGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540755.5
ENST00000546151.5
3UTR-3UTR CCA 90 bp TCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTGAAACCAGCCGGGAGCCCTGGCAAAGACCGCCTCACTaGGCAGGCTGTGGTATGGCC +
Preference number: 2 (lower is better)
Translates to: SGPSIGRKSPAETSREPWQRPPH*AGCGMA
Trigger: GGCCATACCACAGCCTGCCCAGTGAGGCGGTCTTTG...CCAGGGCTCCCGGCTGGTTTCAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540755.5
ENST00000546151.5
3UTR-3UTR TCA 90 bp GAGGGCAGGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGAAGAGCAGAGCTTCTaGGGGGAGCACAGGCTGCAC +
Preference number: 2 (lower is better)
Translates to: EGRPAPRQEVWAQHWKKVEEQSF*GEHRLH
Trigger: GTGCAGCCTGTGCTCCCCTCAGAAGCTCTGCTCTTC...GACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCCTGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
3UTR-3UTR TCA 90 bp CAGGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGAAGAAAGTCGCCTGCTaGAACCAGCCGGGAGCCCTG +
Preference number: 2 (lower is better)
Translates to: QASTQARSLGPALEESRLKKVAC*NQPGAL
Trigger: CAGGGCTCCCGGCTGGTTTCAGCAGGCGACTTTCTT...CAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
3UTR-3UTR TCA 90 bp TCAGCAGAAGCTGCGTGGGCCGCCACTCCCCCTTTCTGCAATCACCCCATGATGAAGAAAGTCGCCTGCTaGAACCAGCCGGGAGCCCTG +
Preference number: 2 (lower is better)
Translates to: SAEAAWAATPPFCNHPMMKKVAC*NQPGAL
Trigger: CAGGGCTCCCGGCTGGTTTCAGCAGGCGACTTTCTT...CATCATGGGGTGATTGCAGAAAGGGGGAGTGGCGGCCCACGCAGCTTCTGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000546151.5
3UTR-3UTR TCA 90 bp GTAGGGCTGCCTGCCGGTGACAGACACGTAAGTCACAGGGAAAGGCCGGGATCCACCGTGGACTGCACTTaGGTCCCAGCTCTTCACCAC +
Preference number: 2 (lower is better)
Translates to: VGLPAGDRHVSHRERPGSTVDCT*VPALHH
Trigger: GTGGTGAAGAGCTGGGACTCAAGTGCAGTCCACGGT...GGATCCCGGCCTTTCCCTGTGACTTACGTGTCTGTCACCGGCAGGCAGCCCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
3UTR-3UTR TCA 90 bp TCCTCAGCAGAAGCTGCGTGGGCCGCCACTCCCCCTTTCTGCAATCACCCCATGACCGTGGACTGCACTTaGGTCCCAGCTCTTCACCAC +
Preference number: 2 (lower is better)
Translates to: SSAEAAWAATPPFCNHPMTVDCT*VPALHH
Trigger: GTGGTGAAGAGCTGGGACTCAAGTGCAGTCCACGGT...CATGGGGTGATTGCAGAAAGGGGGAGTGGCGGCCCACGCAGCTTCTGCTGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000546151.5
3UTR-3UTR TCA 90 bp GCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTGAGGGCTGCCTGCCGGTaGCAGACACGTAAGTCACAG +
Preference number: 2 (lower is better)
Translates to: ASTQARSLGPALEESRLLRAACR*QTRKSQ
Trigger: CTGTGACTTACGTGTCTGTCACCGGCAGGCAGCCCT...CAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
3UTR-3UTR GCA 90 bp TGGAGATGGGGAGCTGGTCATGGGACCCAGGTGCCTGGAGGACATCCCAGTGGCGCTGACGCCAAGGAGTaGAGAAGCCAAAGCCACCAA +
Preference number: 2 (lower is better)
Translates to: WRWGAGHGTQVPGGHPSGADAKE*RSQSHQ
Trigger: TTGGTGGCTTTGGCTTCTGCACTCCTTGGCGTCAGC...GCCACTGGGATGTCCTCCAGGCACCTGGGTCCCATGACCAGCTCCCCATCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
3UTR-3UTR GCA 90 bp TCAGCAGAAGCTGCGTGGGCCGCCACTCCCCCTTTCTGCAATCACCCCATGATGAGAGCAGATGAAGCCTaGTCTGTGGCGGGGCAGCCT +
Preference number: 2 (lower is better)
Translates to: SAEAAWAATPPFCNHPMMRADEA*SVAGQP
Trigger: AGGCTGCCCCGCCACAGAGCAGGCTTCATCTGCTCT...CATCATGGGGTGATTGCAGAAAGGGGGAGTGGCGGCCCACGCAGCTTCTGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000546151.5
3UTR-3UTR GCA 90 bp CCAGAGCGAGGAGGACCTCGTGTGAATGGAGGACCTGAGAGGCTGACGCCAAGGGGAGCCCCTTCCTGCTaGTTCACTCCCCATCATGCA +
Preference number: 2 (lower is better)
Translates to: PERGGPRVNGGPERLTPRGAPSC*FTPHHA
Trigger: TGCATGATGGGGAGTGAAGCAGCAGGAAGGGGCTCC...CCTTGGCGTCAGCCTCTCAGGTCCTCCATTCACACGAGGTCCTCCTCGCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
3UTR-3UTR CCA 90 bp GGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTACCACCAGGAGCTCTTaGGAGCCCCTTCCTGCTGCT +
Preference number: 2 (lower is better)
Translates to: GQHPGKKSGPSIGRKSPATTRSS*EPLPAA
Trigger: AGCAGCAGGAAGGGGCTCCCAAGAGCTCCTGGTGGT...AGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
3UTR-3UTR CCA 90 bp CAGGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGACCACCAGGAGCTCTTaGGAGCCCCTTCCTGCTGCT +
Preference number: 2 (lower is better)
Translates to: QASTQARSLGPALEESRLTTRSS*EPLPAA
Trigger: AGCAGCAGGAAGGGGCTCCCAAGAGCTCCTGGTGGT...CAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
3UTR-3UTR CCA 90 bp TGGAGATGGGGAGCTGGTCATGGGACCCAGGTGCCTGGAGGACATCCCAGTGGCCAGCAGTCTGAAGCTTaGGACCTGGCAGTGCGTCTT +
Preference number: 2 (lower is better)
Translates to: WRWGAGHGTQVPGGHPSGQQSEA*DLAVRL
Trigger: AAGACGCACTGCCAGGTCCCAAGCTTCAGACTGCTG...GCCACTGGGATGTCCTCCAGGCACCTGGGTCCCATGACCAGCTCCCCATCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
3UTR-3UTR CCA 90 bp CTGAAACCAGCCGGGAGCCCTGGGAAGAGCAGAGCTTCTGAGGGGAGCACAGGCTCACTGGGCAGGCTGTaGTATGGCCTGGTGGTGTTT +
Preference number: 2 (lower is better)
Translates to: LKPAGSPGKSRASEGSTGSLGRL*YGLVVF
Trigger: AAACACCACCAGGCCATACCACAGCCTGCCCAGTGA...GCCTGTGCTCCCCTCAGAAGCTCTGCTCTTCCCAGGGCTCCCGGCTGGTTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540755.5
ENST00000546151.5
3UTR-3UTR CCA 90 bp GGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTGCATCCCGGTGCTGTTaGCAAAGACCGCCTCACTGG +
Preference number: 2 (lower is better)
Translates to: GQHPGKKSGPSIGRKSPAASRCC*QRPPHW
Trigger: CCAGTGAGGCGGTCTTTGCCAACAGCACCGGGATGC...AGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540755.5
ENST00000546151.5
3UTR-3UTR CCA 90 bp GAGGGCAGGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCATCCCGGTGCTGTTaGCAAAGACCGCCTCACTGG +
Preference number: 2 (lower is better)
Translates to: EGRPAPRQEVWAQHWKKVASRCC*QRPPHW
Trigger: CCAGTGAGGCGGTCTTTGCCAACAGCACCGGGATGC...GACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCCTGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540755.5
ENST00000546151.5
3UTR-3UTR TCA 90 bp GGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGGACTGCACTAAGAAAGTCGCCTGCTaGAACCAGCCGGGAGCCCTG +
Preference number: 2 (lower is better)
Translates to: GEVDGHLTSLMFHTVDCTKKVAC*NQPGAL
Trigger: CAGGGCTCCCGGCTGGTTTCAGCAGGCGACTTTCTT...AGTGCAGTCCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
3UTR-3UTR TCA 90 bp TCCTCAGCAGAAGCTGCGTGGGCCGCCACTCCCCCTTTCTGCAATCACCCCATGGCGGGGCAGCCTAACTaGAATGCACACCTTTATGGG +
Preference number: 2 (lower is better)
Translates to: SSAEAAWAATPPFCNHPMAGQPN*NAHLYG
Trigger: CCCATAAAGGTGTGCATTTCAGTTAGGCTGCCCCGC...CATGGGGTGATTGCAGAAAGGGGGAGTGGCGGCCCACGCAGCTTCTGCTGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000546151.5
3UTR-3UTR GCA 90 bp CCTTTATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGGGAGGGGAGCACAGGCTaGACCACCAGGAGCTCTTGG +
Preference number: 2 (lower is better)
Translates to: PLWGKWTDTSPPSCFTPWEGSTG*TTRSSW
Trigger: CCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTC...CCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCATAAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
3UTR-3UTR GCA 90 bp GAGGGCAGGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGGAGCCCCTTCCTGCTaGTTCACTCCCCATCATGCA +
Preference number: 2 (lower is better)
Translates to: EGRPAPRQEVWAQHWKKVGAPSC*FTPHHA
Trigger: TGCATGATGGGGAGTGAAGCAGCAGGAAGGGGCTCC...GACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCCTGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
3UTR-3UTR GCA 90 bp CAGGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGGGAGCCCCTTCCTGCTaGTTCACTCCCCATCATGCA +
Preference number: 2 (lower is better)
Translates to: QASTQARSLGPALEESRLGAPSC*FTPHHA
Trigger: TGCATGATGGGGAGTGAAGCAGCAGGAAGGGGCTCC...CAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
3UTR-3UTR CCA 90 bp GAAGGATGTAGAGCACCAGCAGCCCAAAGGCCACCACCAGCATCCCGGTGCTGTCCTTTATGGGGGAAGTaGACGGACACCTCACCTCCC +
Preference number: 2 (lower is better)
Translates to: EGCRAPAAQRPPPASRCCPLWGK*TDTSPP
Trigger: GGGAGGTGAGGTGTCCGTCCACTTCCCCCATAAAGG...ACAGCACCGGGATGCTGGTGGTGGCCTTTGGGCTGCTGGTGCTCTACATCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000540755.5
ENST00000546151.5
3UTR CAA 90 bp ATGGACAGACTGGGGAGTCCCAGCATTTCACTGGGATGCGCTGGTTaGGGACCAGTGCTCCCCATCAGCCACCCTAACTCCACCCTCAAG +
Preference number: 2 (lower is better)
Translates to: MDRLGSPSISLGCAG*GPVLPISHPNSTLK
Trigger: CTTGAGGGTGGAGTTAGGGTGGCTGATGGGGAGCACTGGTCCCAAACCAGCGCATCCCAGTGAAATGCTGGGACTCCCCAGTCTGTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR-3UTR TCA 90 bp GCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTGGCGGGGCAGCCTAACTaGAATGCACACCTTTATGGG +
Preference number: 2 (lower is better)
Translates to: ASTQARSLGPALEESRLLAGQPN*NAHLYG
Trigger: CCCATAAAGGTGTGCATTTCAGTTAGGCTGCCCCGC...CAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
3UTR-3UTR CCA 90 bp CCAGAGCGAGGAGGACCTCGTGTGAATGGAGGACCTGAGAGGCTGACGCCAAGGCCCAGGCAAGAAGTCTaGGCCCAGCATTGGAAGAAA +
Preference number: 2 (lower is better)
Translates to: PERGGPRVNGGPERLTPRPRQEV*AQHWKK
Trigger: TTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGG...CCTTGGCGTCAGCCTCTCAGGTCCTCCATTCACACGAGGTCCTCCTCGCTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
3UTR-3UTR CCA 90 bp TCAGCAGAAGCTGCGTGGGCCGCCACTCCCCCTTTCTGCAATCACCCCATGATGATTAGCCGGGCATGGTaGCACACACTTGTAGGCCCA +
Preference number: 2 (lower is better)
Translates to: SAEAAWAATPPFCNHPMMISRAW*HTLVGP
Trigger: TGGGCCTACAAGTGTGTGCCACCATGCCCGGCTAAT...CATCATGGGGTGATTGCAGAAAGGGGGAGTGGCGGCCCACGCAGCTTCTGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR-3UTR TCA 90 bp CTGATGCTGCCAGAGAGTAGGTGGGCTCCAAACCCCAGGCTTCTCACTTGCTTAGAAGAGCAGAGCTTCTaGGGGGAGCACAGGCTGCAC +
Preference number: 2 (lower is better)
Translates to: LMLPESRWAPNPRLLTCLEEQSF*GEHRLH
Trigger: GTGCAGCCTGTGCTCCCCTCAGAAGCTCTGCTCTTC...TAAGCAAGTGAGAAGCCTGGGGTTTGGAGCCCACCTACTCTCTGGCAGCATCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
3UTR-3UTR TCA 90 bp CTGATGCTGCCAGAGAGTAGGTGGGCTCCAAACCCCAGGCTTCTCACTTGCTTAGAGGACCTGAGAGGCTaGCGCCAAGGAGTGCAGAAG +
Preference number: 2 (lower is better)
Translates to: LMLPESRWAPNPRLLTCLEDLRG*RQGVQK
Trigger: CTTCTGCACTCCTTGGCGTCAGCCTCTCAGGTCCTC...TAAGCAAGTGAGAAGCCTGGGGTTTGGAGCCCACCTACTCTCTGGCAGCATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
3UTR-3UTR TCA 90 bp GCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTGTGGGCGCTTCCAAGATaGAGCCAGAAGGATGTAGAG +
Preference number: 2 (lower is better)
Translates to: ASTQARSLGPALEESRLLWALPR*SQKDVE
Trigger: CTCTACATCCTTCTGGCTTCATCTTGGAAGCGCCCA...CAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540755.5
ENST00000546151.5
3UTR-3UTR TCA 90 bp AAGGCCACCACCAGCATCCCGGTGCTGTTGGCAAAGACCGCCTCACTGGGCAGGAGTTTGATGCTGCAGTaGGCTATGGTCACACCATTG +
Preference number: 2 (lower is better)
Translates to: KATTSIPVLLAKTASLGRSLMLQ*AMVTPL
Trigger: CAATGGTGTGACCATAGCTCACTGCAGCATCAAACT...CCTGCCCAGTGAGGCGGTCTTTGCCAACAGCACCGGGATGCTGGTGGTGGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR-3UTR GCA 90 bp ATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGGACTGCGCTGACGCCAAGGAGTaGAGAAGCCAAAGCCACCAA +
Preference number: 2 (lower is better)
Translates to: MGEVDGHLTSLMFHTVDCADAKE*RSQSHQ
Trigger: TTGGTGGCTTTGGCTTCTGCACTCCTTGGCGTCAGC...GCAGTCCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
3UTR-3UTR GCA 90 bp CTTCATAAACCAGTGAAATGCCTACCCCTATGGAGATGGGGAGCTGGTCATGGGGAGGGGCTGGGGCCCTaGCAAGAGAGCAAGGCCAGA +
Preference number: 2 (lower is better)
Translates to: LHKPVKCLPLWRWGAGHGEGLGP*QESKAR
Trigger: TCTGGCCTTGCTCTCTTGGCAGGGCCCCAGCCCCTC...CCCATGACCAGCTCCCCATCTCCATAGGGGTAGGCATTTCACTGGTTTATGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
3UTR-3UTR CCA 90 bp GAAGGATGTAGAGCACCAGCAGCCCAAAGGCCACCACCAGCATCCCGGTGCTGTCCCAGGCAAGAAGTCTaGGCCCAGCATTGGAAGAAA +
Preference number: 2 (lower is better)
Translates to: EGCRAPAAQRPPPASRCCPRQEV*AQHWKK
Trigger: TTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGG...ACAGCACCGGGATGCTGGTGGTGGCCTTTGGGCTGCTGGTGCTCTACATCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540755.5
ENST00000546151.5
3UTR-3UTR CCA 90 bp TCAGCAGAAGCTGCGTGGGCCGCCACTCCCCCTTTCTGCAATCACCCCATGATGACATCCAGATGGGGCTaGATGGCAGAGCAGATGAAG +
Preference number: 2 (lower is better)
Translates to: SAEAAWAATPPFCNHPMMTSRWG*MAEQMK
Trigger: CTTCATCTGCTCTGCCATCCAGCCCCATCTGGATGT...CATCATGGGGTGATTGCAGAAAGGGGGAGTGGCGGCCCACGCAGCTTCTGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000546151.5
3UTR-3UTR TCA 90 bp AGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGGTGGGAGGACCTGAGAGGCTaGCGCCAAGGAGTGCAGAAG +
Preference number: 2 (lower is better)
Translates to: RRSILALLPTSGNVRLGWEDLRG*RQGVQK
Trigger: CTTCTGCACTCCTTGGCGTCAGCCTCTCAGGTCCTC...CCACCCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
3UTR-3UTR GCA 90 bp TCTGTCTCCCAATGGACAGACTGGGGAGTCCCAGCATTTCACTGGGATGCGCTGTCTGAGTCCCAGCTCTaGCACTTACTGGCTGTGTGC +
Preference number: 2 (lower is better)
Translates to: SVSQWTDWGVPAFHWDALSESQL*HLLAVC
Trigger: GCACACAGCCAGTAAGTGGCAGAGCTGGGACTCAGA...CAGCGCATCCCAGTGAAATGCTGGGACTCCCCAGTCTGTCCATTGGGAGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR-3UTR CCA 90 bp ATGCAAGGCTCTAGAGTCAGACTGCCTAATCTGAGTCCCAGCTCTGCCACTTACTCAGCAGAAGCTGCGTaGGCCGCCACTCCCCCTTTC +
Preference number: 2 (lower is better)
Translates to: MQGSRVRLPNLSPSSATYSAEAA*AATPPF
Trigger: GAAAGGGGGAGTGGCGGCCCACGCAGCTTCTGCTGA...GTAAGTGGCAGAGCTGGGACTCAGATTAGGCAGTCTGACTCTAGAGCCTTGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR-3UTR CCA 90 bp ATGCAAGGCTCTAGAGTCAGACTGCCTAATCTGAGTCCCAGCTCTGCCACTTACGTAATCCCAGCACTCTaGGAGGCCGAGGCGGGCAGA +
Preference number: 2 (lower is better)
Translates to: MQGSRVRLPNLSPSSATYVIPAL*EAEAGR
Trigger: TCTGCCCGCCTCGGCCTCCCAGAGTGCTGGGATTAC...GTAAGTGGCAGAGCTGGGACTCAGATTAGGCAGTCTGACTCTAGAGCCTTGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR-3UTR TCA 90 bp ATGCAAGGCTCTAGAGTCAGACTGCCTAATCTGAGTCCCAGCTCTGCCACTTACGAGGACCTGAGAGGCTaGCGCCAAGGAGTGCAGAAG +
Preference number: 2 (lower is better)
Translates to: MQGSRVRLPNLSPSSATYEDLRG*RQGVQK
Trigger: CTTCTGCACTCCTTGGCGTCAGCCTCTCAGGTCCTC...GTAAGTGGCAGAGCTGGGACTCAGATTAGGCAGTCTGACTCTAGAGCCTTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR-3UTR TCA 90 bp GCACACCTTTATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACGCGGGGCAGCCTAACTaGAATGCACACCTTTATGGG +
Preference number: 2 (lower is better)
Translates to: AHLYGGSGRTPHLPHVSHAGQPN*NAHLYG
Trigger: CCCATAAAGGTGTGCATTTCAGTTAGGCTGCCCCGC...GTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCATAAAGGTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
3UTR-3UTR CCA 90 bp CTTCATAAACCAGTGAAATGCCTACCCCTATGGAGATGGGGAGCTGGTCATGGGACCACCAGGAGCTCTTaGGAGCCCCTTCCTGCTGCT +
Preference number: 2 (lower is better)
Translates to: LHKPVKCLPLWRWGAGHGTTRSS*EPLPAA
Trigger: AGCAGCAGGAAGGGGCTCCCAAGAGCTCCTGGTGGT...CCCATGACCAGCTCCCCATCTCCATAGGGGTAGGCATTTCACTGGTTTATGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
3UTR-3UTR CCA 90 bp CCTCGTGTGAATGGAGGACCTGAGAGGCTGACGCCAAGGAGTGCAGAAGCCAAACCCAGGCAAGAAGTCTaGGCCCAGCATTGGAAGAAA +
Preference number: 2 (lower is better)
Translates to: PRVNGGPERLTPRSAEAKPRQEV*AQHWKK
Trigger: TTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGG...TTTGGCTTCTGCACTCCTTGGCGTCAGCCTCTCAGGTCCTCCATTCACACGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
3UTR-3UTR CCA 90 bp TACATCCCATCAAGACCTGCTCTGAGCACTCAGCTGGTCACCAGGCACCCATCCCCCAGGCAAGAAGTCTaGGCCCAGCATTGGAAGAAA +
Preference number: 2 (lower is better)
Translates to: YIPSRPALSTQLVTRHPSPRQEV*AQHWKK
Trigger: TTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGG...GGATGGGTGCCTGGTGACCAGCTGAGTGCTCAGAGCAGGTCTTGATGGGATGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR-3UTR CCA 90 bp ATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGGACTGCTCATGTTTCACACCGTaGACTGCACTTGAGTCCCAG +
Preference number: 2 (lower is better)
Translates to: MGEVDGHLTSLMFHTVDCSCFTP*TALESQ
Trigger: CTGGGACTCAAGTGCAGTCCACGGTGTGAAACATGA...GCAGTCCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
3UTR-3UTR CCA 90 bp GCACACCTTTATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACACATCCAGATGGGGCTaGATGGCAGAGCAGATGAAG +
Preference number: 2 (lower is better)
Translates to: AHLYGGSGRTPHLPHVSHTSRWG*MAEQMK
Trigger: CTTCATCTGCTCTGCCATCCAGCCCCATCTGGATGT...GTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCATAAAGGTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000546151.5
3UTR-3UTR CCA 90 bp AGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTGAAAGGGCAGGCTGTGGTATaGCCTGGTGGTGTTTTTCAA +
Preference number: 2 (lower is better)
Translates to: STQARSLGPALEESRLLKGQAVV*PGGVFQ
Trigger: TTGAAAAACACCACCAGGCCATACCACAGCCTGCCC...TTTCAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540755.5
3UTR-3UTR CCA 90 bp TACATCCCATCAAGACCTGCTCTGAGCACTCAGCTGGTCACCAGGCACCCATCCTGCTGCAGTGAGCTATaGTCACACCATTGCTCTCCA +
Preference number: 2 (lower is better)
Translates to: YIPSRPALSTQLVTRHPSCCSEL*SHHCSP
Trigger: TGGAGAGCAATGGTGTGACCATAGCTCACTGCAGCA...GGATGGGTGCCTGGTGACCAGCTGAGTGCTCAGAGCAGGTCTTGATGGGATGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR-3UTR TCA 90 bp ACTGCACTTGAGTCCCAGCTCTTCACCACATCCCTAGGAGTCTTAAGAGGAAATAAGAAAGTCGCCTGCTaGAACCAGCCGGGAGCCCTG +
Preference number: 2 (lower is better)
Translates to: TALESQLFTTSLGVLRGNKKVAC*NQPGAL
Trigger: CAGGGCTCCCGGCTGGTTTCAGCAGGCGACTTTCTT...ATTTCCTCTTAAGACTCCTAGGGATGTGGTGAAGAGCTGGGACTCAAGTGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
3UTR-3UTR CCA 90 bp CTTTATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGGATCATGTTTCACACCGTaGACTGCACTTGAGTCCCAG +
Preference number: 2 (lower is better)
Translates to: LYGGSGRTPHLPHVSHRGSCFTP*TALESQ
Trigger: CTGGGACTCAAGTGCAGTCCACGGTGTGAAACATGA...TCCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCATAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
3UTR-3UTR CCA 90 bp CAGCCAGTCAAGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGCACCTCACATCCAGATaGGGCTGGATGGCAGAGCAG +
Preference number: 2 (lower is better)
Translates to: QPVKTVNISPSANIWQCEHLTSR*GWMAEQ
Trigger: CTGCTCTGCCATCCAGCCCCATCTGGATGTGAGGTG...CTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTTGACTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
3UTR-3UTR CCA 90 bp TCCTTGGGGAAGAAGATAAGGCCACACTTCACCCCACAGAACCACAGTGATTTGCACCTCACATCCAGATaGGGCTGGATGGCAGAGCAG +
Preference number: 2 (lower is better)
Translates to: SLGKKIRPHFTPQNHSDLHLTSR*GWMAEQ
Trigger: CTGCTCTGCCATCCAGCCCCATCTGGATGTGAGGTG...CAAATCACTGTGGTTCTGTGGGGTGAAGTGTGGCCTTATCTTCTTCCCCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR CAA 90 bp ATCTCTCCTCCCTTGGGTGAGTCCTGTGATCACAGGGTGTATCTTTaGAAGACCCTATTCCCTCCTCTTCACCTTAGAGTTGGGGACCCC +
Preference number: 2 (lower is better)
Translates to: ISPPLGESCDHRVYL*KTLFPPLHLRVGDP
Trigger: GGGGTCCCCAACTCTAAGGTGAAGAGGAGGGAATAGGGTCTTCAAAAGATACACCCTGTGATCACAGGACTCACCCAAGGGAGGAGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR-3UTR TCA 90 bp CAGCCAGTCAAGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGCCAGGAGTAGGATGCTaGTGCTGCCAGAGAGTAGGT +
Preference number: 2 (lower is better)
Translates to: QPVKTVNISPSANIWQCEPGVGC*CCQRVG
Trigger: ACCTACTCTCTGGCAGCATCAGCATCCTACTCCTGG...CTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTTGACTGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
3UTR-3UTR GCA 90 bp ATGCAAGGCTCTAGAGTCAGACTGCCTAATCTGAGTCCCAGCTCTGCCACTTACCAGAGGCAGGAGAATTaGTTGAACCCAGCAGGTGGA +
Preference number: 2 (lower is better)
Translates to: MQGSRVRLPNLSPSSATYQRQEN*LNPAGG
Trigger: TCCACCTGCTGGGTTCAAGCAATTCTCCTGCCTCTG...GTAAGTGGCAGAGCTGGGACTCAGATTAGGCAGTCTGACTCTAGAGCCTTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR-3UTR GCA 90 bp TCTGTCTCCCAATGGACAGACTGGGGAGTCCCAGCATTTCACTGGGATGCGCTGTTGGAGACTAGCCTGTaGAACATAGTGAGATCCTGT +
Preference number: 2 (lower is better)
Translates to: SVSQWTDWGVPAFHWDALLETSL*NIVRSC
Trigger: ACAGGATCTCACTATGTTGCACAGGCTAGTCTCCAA...CAGCGCATCCCAGTGAAATGCTGGGACTCCCCAGTCTGTCCATTGGGAGACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR-3UTR TCA 90 bp GAAGGATGTAGAGCACCAGCAGCCCAAAGGCCACCACCAGCATCCCGGTGCTGTGGTGCTAAATCAAACTaGTGCTCAATAAATATCTGC +
Preference number: 2 (lower is better)
Translates to: EGCRAPAAQRPPPASRCCGAKSN*CSINIC
Trigger: GCAGATATTTATTGAGCATCAGTTTGATTTAGCACC...ACAGCACCGGGATGCTGGTGGTGGCCTTTGGGCTGCTGGTGCTCTACATCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR-3UTR CCA 90 bp CAGCCAGTCAAGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTCAAGCTCTAGCATaGCACAGAACGCTAGGTTGG +
Preference number: 2 (lower is better)
Translates to: QPVKTVNISPSANIWQCEAQALA*HRTLGW
Trigger: CCAACCTAGCGTTCTGTGCCATGCTAGAGCTTGAGC...CTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTTGACTGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
3UTR-3UTR CCA 90 bp CAGCCAGTCAAGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGCTGAAGCTTGGGACCTaGCAGTGCGTCTTTGGAGAA +
Preference number: 2 (lower is better)
Translates to: QPVKTVNISPSANIWQCELKLGT*QCVFGE
Trigger: TTCTCCAAAGACGCACTGCCAGGTCCCAAGCTTCAG...CTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTTGACTGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
3UTR-3UTR TCA 90 bp AGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGGTGGAAGAGGAAATCAGTCTaGTTTCTTCAGACAGGAGCA +
Preference number: 2 (lower is better)
Translates to: RRSILALLPTSGNVRLGWKRKSV*FLQTGA
Trigger: TGCTCCTGTCTGAAGAAATCAGACTGATTTCCTCTT...CCACCCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
3UTR-3UTR TCA 90 bp AAGCCCTTCCTTGGGGAAGAAGATAAGGCCACACTTCACCCCACAGAACCACAGGATGACAAAACAATGTaGGCCCTCGAGAGATTTTTC +
Preference number: 2 (lower is better)
Translates to: KPFLGEEDKATLHPTEPQDDKTM*ALERFF
Trigger: GAAAAATCTCTCGAGGGCTCACATTGTTTTGTCATC...CTGTGGTTCTGTGGGGTGAAGTGTGGCCTTATCTTCTTCCCCAAGGAAGGGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR-3UTR CCA 90 bp ACCTTTATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGACCAATGATGTAGGGTaGTTGACAGGATTAAATGTA +
Preference number: 2 (lower is better)
Translates to: TFMGEVDGHLTSLMFHTVTNDVG*LTGLNV
Trigger: TACATTTAATCCTGTCAACCACCCTACATCATTGGT...CACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCATAAAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR-3UTR GCA 90 bp AGCTGTAATAATCCTTTTACCCATGAGGAAACTGAAGCTCAAAGCAATGAAATTAGTTGGGGACCCCACTaGACTCACAAACTGAAGAAA +
Preference number: 2 (lower is better)
Translates to: SCNNPFTHEETEAQSNEISWGPH*THKLKK
Trigger: TTTCTTCAGTTTGTGAGTGCAGTGGGGTCCCCAACT...AATTTCATTGCTTTGAGCTTCAGTTTCCTCATGGGTAAAAGGATTATTACAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR GCA 72 bp GCACCAGCAGCCCAAAGGCCACCACCAGCATCCCGGTaGTGTTGGCAAAGACCGCCTCACTGGGCAGGCTGT +
Preference number: 3 (lower is better)
Translates to: APAAQRPPPASR*CWQRPPHWAGC
Trigger: ACAGCCTGCCCAGTGAGGCGGTCTTTGCCAACAGCACCGGGATGCTGGTGGTGGCCTTTGGGCTGCTGGTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540755.5
ENST00000546151.5
3UTR-3UTR CAA 90 bp TGGAGATGGGGAGCTGGTCATGGGACCCAGGTGCCTGGAGGACATCCCAGTGGCAGTCTGGGCCCAGCATaGGAAGAAAGTCGCCTGCTG +
Preference number: 3 (lower is better)
Translates to: WRWGAGHGTQVPGGHPSGSLGPA*EESRLL
Trigger: CAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACT...GCCACTGGGATGTCCTCCAGGCACCTGGGTCCCATGACCAGCTCCCCATCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
3UTR GCA 72 bp ACACCAGGCCCAAGCTGTTCAGACAGACCCCCAGCCTaGAGGGTGGTCCCCATCCAAGCCACCAAATCCCTC +
Preference number: 3 (lower is better)
Translates to: TPGPSCSDRPPA*RVVPIQATKSL
Trigger: GAGGGATTTGGTGGCTTGGATGGGGACCACCCTGCAGGCTGGGGGTCTGTCTGAACAGCTTGGGCCTGGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR CCA 72 bp CTAGACCTGGCCCTGTCCCACCCTGGAATGTGGGACTaGAACCCATACCTGTCTGTCGGTCAGGATCCCCGG +
Preference number: 3 (lower is better)
Translates to: LDLALSHPGMWD*NPYLSVGQDPR
Trigger: CCGGGGATCCTGACCGACAGACAGGTATGGGTTCCAGTCCCACATTCCAGGGTGGGACAGGGCCAGGTCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR-3UTR CAA 90 bp GGCAGGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCAGTCTGGGCCCAGCATaGGAAGAAAGTCGCCTGCTG +
Preference number: 3 (lower is better)
Translates to: GRPAPRQEVWAQHWKKVASLGPA*EESRLL
Trigger: CAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACT...GGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
3UTR TCA 72 bp GCCAGAGCGAGGAGGACCTCGTGTGAATGGAGGACCTaGGAGGCTGACGCCAAGGAGTGCAGAAGCCAAAGC +
Preference number: 3 (lower is better)
Translates to: ARARRTSCEWRT*EADAKECRSQS
Trigger: GCTTTGGCTTCTGCACTCCTTGGCGTCAGCCTCTCAGGTCCTCCATTCACACGAGGTCCTCCTCGCTCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
3UTR CCA 72 bp CCAGCATCCCGGTGCTGTTGGCAAAGACCGCCTCACTaGGCAGGCTGTGGTATGGCCTGGTGGTGTTTTTCC +
Preference number: 3 (lower is better)
Translates to: PASRCCWQRPPH*AGCGMAWWCFS
Trigger: GGAAAAACACCACCAGGCCATACCACAGCCTGCCCAGTGAGGCGGTCTTTGCCAACAGCACCGGGATGCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR-3UTR CAA 90 bp TGGAGATGGGGAGCTGGTCATGGGACCCAGGTGCCTGGAGGACATCCCAGTGGCCCCCAGGCTTCTCACTaGCTTACTAAGCACAGCAGT +
Preference number: 3 (lower is better)
Translates to: WRWGAGHGTQVPGGHPSGPQASH*LTKHSS
Trigger: ACTGCTGTGCTTAGTAAGCAAGTGAGAAGCCTGGGG...GCCACTGGGATGTCCTCCAGGCACCTGGGTCCCATGACCAGCTCCCCATCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
3UTR TCA 72 bp GAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTaGAACCAGCCGGGAGCCCTGGGAAGAGCAGAGCTT +
Preference number: 3 (lower is better)
Translates to: EVWAQHWKKVAC*NQPGALGRAEL
Trigger: AAGCTCTGCTCTTCCCAGGGCTCCCGGCTGGTTTCAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
3UTR TCA 72 bp GTCGGTCAGGATCCCCGGCTCTGGGCGCTTCCAAGATaGAGCCAGAAGGATGTAGAGCACCAGCAGCCCAAA +
Preference number: 3 (lower is better)
Translates to: VGQDPRLWALPR*SQKDVEHQQPK
Trigger: TTTGGGCTGCTGGTGCTCTACATCCTTCTGGCTTCATCTTGGAAGCGCCCAGAGCCGGGGATCCTGACCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540755.5
ENST00000546151.5
3UTR GCA 72 bp ATGGACAGACTGGGGAGTCCCAGCATTTCACTGGGATaGGCTGGTTTGGGACCAGTGCTCCCCATCAGCCAC +
Preference number: 3 (lower is better)
Translates to: MDRLGSPSISLG*AGLGPVLPISH
Trigger: GTGGCTGATGGGGAGCACTGGTCCCAAACCAGCGCATCCCAGTGAAATGCTGGGACTCCCCAGTCTGTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR GCA 72 bp GGTACACACCCCGTCTCCCTACATCCCATCAAGACCTaGTCTGAGCACTCAGCTGGTCACCAGGCACCCATC +
Preference number: 3 (lower is better)
Translates to: GTHPVSLHPIKT*SEHSAGHQAPI
Trigger: GATGGGTGCCTGGTGACCAGCTGAGTGCTCAGAGCAGGTCTTGATGGGATGTAGGGAGACGGGGTGTGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR CCA 72 bp ACCAGTGAAATGCCTACCCCTATGGAGATGGGGAGCTaGTCATGGGACCCAGGTGCCTGGAGGACATCCCAG +
Preference number: 3 (lower is better)
Translates to: TSEMPTPMEMGS*SWDPGAWRTSQ
Trigger: CTGGGATGTCCTCCAGGCACCTGGGTCCCATGACCAGCTCCCCATCTCCATAGGGGTAGGCATTTCACTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
3UTR CCA 72 bp CCAGCATCCCGGTGCTGTTGGCAAAGACCGCCTCACTaGGCAGGCTGTGGTATGGCCTGGTGGTGTTTTTCA +
Preference number: 3 (lower is better)
Translates to: PASRCCWQRPPH*AGCGMAWWCFS
Trigger: TGAAAAACACCACCAGGCCATACCACAGCCTGCCCAGTGAGGCGGTCTTTGCCAACAGCACCGGGATGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540755.5
3UTR CCA 72 bp TGGGGAGTCCCAGCATTTCACTGGGATGCGCTGGTTTaGGACCAGTGCTCCCCATCAGCCACCCTAACTCCA +
Preference number: 3 (lower is better)
Translates to: WGVPAFHWDALV*DQCSPSATLTP
Trigger: TGGAGTTAGGGTGGCTGATGGGGAGCACTGGTCCCAAACCAGCGCATCCCAGTGAAATGCTGGGACTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR-3UTR CAA 90 bp ATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGGACTGCAGTCTGGGCCCAGCATaGGAAGAAAGTCGCCTGCTG +
Preference number: 3 (lower is better)
Translates to: MGEVDGHLTSLMFHTVDCSLGPA*EESRLL
Trigger: CAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACT...GCAGTCCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
3UTR-3UTR CAA 90 bp GGAGTCACACCAGGCCCAAGCTGTTCAGACAGACCCCCAGCCTGCAGGGTGGTCAAAATCTCTCCTCCCTaGGGTGAGTCCTGTGATCAC +
Preference number: 3 (lower is better)
Translates to: GVTPGPSCSDRPPACRVVKISPP*GESCDH
Trigger: GTGATCACAGGACTCACCCAAGGGAGGAGAGATTTT...GACCACCCTGCAGGCTGGGGGTCTGTCTGAACAGCTTGGGCCTGGTGTGACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR TCA 72 bp GTGGACGTTGGCCTGATGTTGCCAGGAGTAGGATGCTaGTGCTGCCAGAGAGTAGGTGGGCTCCAAACCCCA +
Preference number: 3 (lower is better)
Translates to: VDVGLMLPGVGC*CCQRVGGLQTP
Trigger: TGGGGTTTGGAGCCCACCTACTCTCTGGCAGCATCAGCATCCTACTCCTGGCAACATCAGGCCAACGTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
3UTR TCA 72 bp AAGCCACCAAATCCCTCAGGGAAGCCCCAAAGTCCCTaGGCCTGGTACACACCCCGTCTCCCTACATCCCAT +
Preference number: 3 (lower is better)
Translates to: KPPNPSGKPQSP*AWYTPRLPTSH
Trigger: ATGGGATGTAGGGAGACGGGGTGTGTACCAGGCTCAGGGACTTTGGGGCTTCCCTGAGGGATTTGGTGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR GCA 72 bp CCAGCATTTCACTGGGATGCGCTGGTTTGGGACCAGTaGTCCCCATCAGCCACCCTAACTCCACCCTCAAGT +
Preference number: 3 (lower is better)
Translates to: PAFHWDALVWDQ*SPSATLTPPSS
Trigger: ACTTGAGGGTGGAGTTAGGGTGGCTGATGGGGAGCACTGGTCCCAAACCAGCGCATCCCAGTGAAATGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR CCA 72 bp CCTTCTCTAGACCTGGCCCTGTCCCACCCTGGAATGTaGGACTGGAACCCATACCTGTCTGTCGGTCAGGAT +
Preference number: 3 (lower is better)
Translates to: PSLDLALSHPGM*DWNPYLSVGQD
Trigger: ATCCTGACCGACAGACAGGTATGGGTTCCAGTCCCACATTCCAGGGTGGGACAGGGCCAGGTCTAGAGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR CCA 72 bp TCCCAATGGACAGACTGGGGAGTCCCAGCATTTCACTaGGATGCGCTGGTTTGGGACCAGTGCTCCCCATCA +
Preference number: 3 (lower is better)
Translates to: SQWTDWGVPAFH*DALVWDQCSPS
Trigger: TGATGGGGAGCACTGGTCCCAAACCAGCGCATCCCAGTGAAATGCTGGGACTCCCCAGTCTGTCCATTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR TCA 72 bp TGGGACCCAGGTGCCTGGAGGACATCCCAGTGGCTTTaGAGGCTCCAGCCAGTCAAGACGGTCAATATTAGC +
Preference number: 3 (lower is better)
Translates to: WDPGAWRTSQWL*RLQPVKTVNIS
Trigger: GCTAATATTGACCGTCTTGACTGGCTGGAGCCTTCAAAGCCACTGGGATGTCCTCCAGGCACCTGGGTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
3UTR CCA 72 bp TGGACGGACACCTCACCTCCCTCATGTTTCACACCGTaGACTGCACTTGAGTCCCAGCTCTTCACCACATCC +
Preference number: 3 (lower is better)
Translates to: WTDTSPPSCFTP*TALESQLFTTS
Trigger: GGATGTGGTGAAGAGCTGGGACTCAAGTGCAGTCCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
3UTR CCA 72 bp CTTCATAAACCAGTGAAATGCCTACCCCTATGGAGATaGGGAGCTGGTCATGGGACCCAGGTGCCTGGAGGA +
Preference number: 3 (lower is better)
Translates to: LHKPVKCLPLWR*GAGHGTQVPGG
Trigger: TCCTCCAGGCACCTGGGTCCCATGACCAGCTCCCCATCTCCATAGGGGTAGGCATTTCACTGGTTTATGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
3UTR CCA 72 bp GTGCTGTTGGCAAAGACCGCCTCACTGGGCAGGCTGTaGTATGGCCTGGTGGTGTTTTTCCTGAAGATGACA +
Preference number: 3 (lower is better)
Translates to: VLLAKTASLGRL*YGLVVFFLKMT
Trigger: TGTCATCTTCAGGAAAAACACCACCAGGCCATACCACAGCCTGCCCAGTGAGGCGGTCTTTGCCAACAGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR-3UTR CAA 90 bp GCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTGAATCTGTTCCCTCAATaGAAAATGGCAATGACGGCC +
Preference number: 3 (lower is better)
Translates to: ASTQARSLGPALEESRLLNLFPQ*KMAMTA
Trigger: GGCCGTCATTGCCATTTTCAATTGAGGGAACAGATT...CAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR TCA 72 bp CCCAGGCTTCTCACTTGCTTACTAAGCACAGCAGTCTaGAGCTTGGGACCTGGCAGTGCGTCTTTGGAGAAG +
Preference number: 3 (lower is better)
Translates to: PRLLTCLLSTAV*SLGPGSASLEK
Trigger: CTTCTCCAAAGACGCACTGCCAGGTCCCAAGCTTCAGACTGCTGTGCTTAGTAAGCAAGTGAGAAGCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
3UTR CCA 72 bp GTCAAGACGGTCAATATTAGCCCTTCTGCCAACATCTaGCAATGTGAGGCTGGGGTGGACGTTGGCCTGATG +
Preference number: 3 (lower is better)
Translates to: VKTVNISPSANI*QCEAGVDVGLM
Trigger: CATCAGGCCAACGTCCACCCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
3UTR-3UTR CAA 90 bp TGGACTGCACTTGAGTCCCAGCTCTTCACCACATCCCTAGGAGTCTTAAGAGGACTCTTCACCTTAGAGTaGGGGACCCCACTGCACTCA +
Preference number: 3 (lower is better)
Translates to: WTALESQLFTTSLGVLRGLFTLE*GTPLHS
Trigger: TGAGTGCAGTGGGGTCCCCAACTCTAAGGTGAAGAG...TCCTCTTAAGACTCCTAGGGATGTGGTGAAGAGCTGGGACTCAAGTGCAGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR TCA 72 bp GGAAGATCGCTTGAGTGCAGGAGTTTGATGCTGCAGTaGGCTATGGTCACACCATTGCTCTCCAACCTAGGC +
Preference number: 3 (lower is better)
Translates to: GRSLECRSLMLQ*AMVTPLLSNLG
Trigger: GCCTAGGTTGGAGAGCAATGGTGTGACCATAGCTCACTGCAGCATCAAACTCCTGCACTCAAGCGATCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR CCA 72 bp GTGCTGTTGGCAAAGACCGCCTCACTGGGCAGGCTGTaGTATGGCCTGGTGGTGTTTTTCAAACTGAAGAAA +
Preference number: 3 (lower is better)
Translates to: VLLAKTASLGRL*YGLVVFFKLKK
Trigger: TTTCTTCAGTTTGAAAAACACCACCAGGCCATACCACAGCCTGCCCAGTGAGGCGGTCTTTGCCAACAGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540755.5
3UTR CCA 72 bp GTTGGCAAAGACCGCCTCACTGGGCAGGCTGTGGTATaGCCTGGTGGTGTTTTTCCTGAAGATGACAAAACA +
Preference number: 3 (lower is better)
Translates to: VGKDRLTGQAVV*PGGVFPEDDKT
Trigger: TGTTTTGTCATCTTCAGGAAAAACACCACCAGGCCATACCACAGCCTGCCCAGTGAGGCGGTCTTTGCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR CCA 72 bp GTTGGCAAAGACCGCCTCACTGGGCAGGCTGTGGTATaGCCTGGTGGTGTTTTTCAAACTGAAGAAAAGCTT +
Preference number: 3 (lower is better)
Translates to: VGKDRLTGQAVV*PGGVFQTEEKL
Trigger: AAGCTTTTCTTCAGTTTGAAAAACACCACCAGGCCATACCACAGCCTGCCCAGTGAGGCGGTCTTTGCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000540755.5
3UTR-3UTR CAA 90 bp ATGCAAGGCTCTAGAGTCAGACTGCCTAATCTGAGTCCCAGCTCTGCCACTTACCACAGGGTGTATCTTTaGAAGACCCTATTCCCTCCT +
Preference number: 3 (lower is better)
Translates to: MQGSRVRLPNLSPSSATYHRVYL*KTLFPP
Trigger: AGGAGGGAATAGGGTCTTCAAAAGATACACCCTGTG...GTAAGTGGCAGAGCTGGGACTCAGATTAGGCAGTCTGACTCTAGAGCCTTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR TCA 72 bp AGGCTACATTGGGAAGATCGCTTGAGTGCAGGAGTTTaGTGCTGCAGTGAGCTATGGTCACACCATTGCTCT +
Preference number: 3 (lower is better)
Translates to: RLHWEDRLSAGV*CCSELWSHHCS
Trigger: AGAGCAATGGTGTGACCATAGCTCACTGCAGCATCAAACTCCTGCACTCAAGCGATCTTCCCAATGTAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR TCA 72 bp CCTTGGGTGAGTCCTGTGATCACAGGGTGTATCTTTTaGAGACCCTATTCCCTCCTCTTCACCTTAGAGTTG +
Preference number: 3 (lower is better)
Translates to: PWVSPVITGCIF*RPYSLLFTLEL
Trigger: CAACTCTAAGGTGAAGAGGAGGGAATAGGGTCTTCAAAAGATACACCCTGTGATCACAGGACTCACCCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR TCA 72 bp TTGTCTAGTGGGAGACTCGATGTCACTAACAGAGGGTaGGAAAACCTTCCCGGGTCCATATGTGATCTAGAA +
Preference number: 3 (lower is better)
Translates to: LSSGRLDVTNRG*ENLPGSICDLE
Trigger: TTCTAGATCACATATGGACCCGGGAAGGTTTTCTCACCCTCTGTTAGTGACATCGAGTCTCCCACTAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR GCA 72 bp TATTTAATGAAACTCGAGCTTCATAAACCAGTGAAATaGCTACCCCTATGGAGATGGGGAGCTGGTCATGGG +
Preference number: 3 (lower is better)
Translates to: YLMKLELHKPVK*LPLWRWGAGHG
Trigger: CCCATGACCAGCTCCCCATCTCCATAGGGGTAGGCATTTCACTGGTTTATGAAGCTCGAGTTTCATTAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
3UTR CCA 72 bp ATGACAACAATACCAATCAATACCAATGATGTAGGGTaGTTGACAGGATTAAATGTAAGGTGCTTAGTACTG +
Preference number: 3 (lower is better)
Translates to: MTTIPINTNDVG*LTGLNVRCLVL
Trigger: CAGTACTAAGCACCTTACATTTAATCCTGTCAACCACCCTACATCATTGGTATTGATTGGTATTGTTGTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR GCA 90 bp CTGAAACCAGCCGGGAGCCCTGGGAAGAGCAGAGCTTCTGAGGGGAGCACAGGCCTCCTCAGCAGAAGCTaGGTGGGCCGCCACTCCCCC +
Preference number: 4 (lower is better)
Translates to: LKPAGSPGKSRASEGSTGLLSRS*VGRHSP
Trigger: GGGGGAGTGGCGGCCCACGCAGCTTCTGCTGAGGAG...GCCTGTGCTCCCCTCAGAAGCTCTGCTCTTCCCAGGGCTCCCGGCTGGTTTCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000546151.5
CDS-3UTR GCA 90 bp CTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTGCTGGAGGGGAGCACAGGCTaGACCACCAGGAGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LRGAQAAPPGALGSPFLLEGSTG*TTRSSW
Trigger: CCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTC...CAGCAGGAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000539890.1
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR GCA 90 bp GGCAGGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCCTCCTCAGCAGAAGCTaGGTGGGCCGCCACTCCCCC +
Preference number: 4 (lower is better)
Translates to: GRPAPRQEVWAQHWKKVALLSRS*VGRHSP
Trigger: GGGGGAGTGGCGGCCCACGCAGCTTCTGCTGAGGAG...GGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000546151.5
CDS-3UTR GCA 90 bp GGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTCCCTCAGCAAGGCCGTaGGCAGTGTGGGCGGGAGCC +
Preference number: 4 (lower is better)
Translates to: GQHPGKKSGPSIGRKSPAPSARP*AVWAGA
Trigger: GGCTCCCGCCCACACTGCGCACGGCCTTGCTGAGGG...AGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426130.6
CDS-3UTR GCA 90 bp GTAGGGCTGCCTGCCGGTGACAGACACGTAAGTCACAGGGAAAGGCCGGGATCCACAGCCGGCTGGCAATaGCGCCCCAGAGCAGAGCGG +
Preference number: 4 (lower is better)
Translates to: VGLPAGDRHVSHRERPGSTAGWQ*RPRAER
Trigger: CCGCTCTGCTCTGGGGCGGCATTGCCAGCCGGCTGT...GGATCCCGGCCTTTCCCTGTGACTTACGTGTCTGTCACCGGCAGGCAGCCCTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426130.6
CDS-3UTR TCA 90 bp CTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTGCTGAAGAAAGTCGCCTGCTaGAACCAGCCGGGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: LRGAQAAPPGALGSPFLLKKVAC*NQPGAL
Trigger: CAGGGCTCCCGGCTGGTTTCAGCAGGCGACTTTCTT...CAGCAGGAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000539890.1
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR GCA 90 bp CTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTGCTGCCACCAGCATCCCGGTaGTGTTGGCAAAGACCGCCT +
Preference number: 4 (lower is better)
Translates to: LRGAQAAPPGALGSPFLLPPASR*CWQRPP
Trigger: AGGCGGTCTTTGCCAACAGCACCGGGATGCTGGTGG...CAGCAGGAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000539890.1
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR GCA 90 bp CTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTGGAGGGGAGCACAGGCTaGACCACCAGGAGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LLRGAQAAPPGALGSPFLEGSTG*TTRSSW
Trigger: CCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTC...CAGGAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000539890.1
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR GCA 90 bp TCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTGCTGAGGGGAGCACAGGCTaGACCACCAGGAGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: SEGSTGCTTRSSWEPLPAEGSTG*TTRSSW
Trigger: CCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTC...AGCAGGAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000539890.1
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CCA 90 bp GGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTGGCCCCACCCACGACTaGGGCAGGCGGTACACCAGT +
Preference number: 4 (lower is better)
Translates to: GQHPGKKSGPSIGRKSPAGPTHD*GRRYTS
Trigger: ACTGGTGTACCGCCTGCCCCAGTCGTGGGTGGGGCC...AGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
CDS-3UTR CCA 90 bp TCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTGCTGTTTCCAGGGCAGTTTaGGCCCCACCCACGACTGGG +
Preference number: 4 (lower is better)
Translates to: SEGSTGCTTRSSWEPLPAVSRAV*APPTTG
Trigger: CCCAGTCGTGGGTGGGGCCCAAACTGCCCTGGAAAC...AGCAGGAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
CDS-3UTR CCA 90 bp CTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTGCTGCAAAGACCGCCTCACTaGGCAGGCTGTGGTATGGCC +
Preference number: 4 (lower is better)
Translates to: LRGAQAAPPGALGSPFLLQRPPH*AGCGMA
Trigger: GGCCATACCACAGCCTGCCCAGTGAGGCGGTCTTTG...CAGCAGGAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000539890.1
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR TCA 90 bp GAGCTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCCAGCCCCACAACAGTaGGGACGAAGGCCATCAGGT +
Preference number: 4 (lower is better)
Translates to: ELLRGAQAAPPGALGSPFPAPQQ*GRRPSG
Trigger: ACCTGATGGCCTTCGTCCTCACTGTTGTGGGGCTGG...GAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
CDS-3UTR TCA 90 bp CTGAAACCAGCCGGGAGCCCTGGGAAGAGCAGAGCTTCTGAGGGGAGCACAGGCGAAGAGCAGAGCTTCTaGGGGGAGCACAGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: LKPAGSPGKSRASEGSTGEEQSF*GEHRLH
Trigger: GTGCAGCCTGTGCTCCCCTCAGAAGCTCTGCTCTTC...GCCTGTGCTCCCCTCAGAAGCTCTGCTCTTCCCAGGGCTCCCGGCTGGTTTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000539890.1
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR TCA 90 bp CTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTGGAAGAGCAGAGCTTCTaGGGGGAGCACAGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: LLRGAQAAPPGALGSPFLEEQSF*GEHRLH
Trigger: GTGCAGCCTGTGCTCCCCTCAGAAGCTCTGCTCTTC...CAGGAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000539890.1
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR TCA 90 bp CTGAAACCAGCCGGGAGCCCTGGGAAGAGCAGAGCTTCTGAGGGGAGCACAGGCAAGAAAGTCGCCTGCTaGAACCAGCCGGGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: LKPAGSPGKSRASEGSTGKKVAC*NQPGAL
Trigger: CAGGGCTCCCGGCTGGTTTCAGCAGGCGACTTTCTT...GCCTGTGCTCCCCTCAGAAGCTCTGCTCTTCCCAGGGCTCCCGGCTGGTTTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000539890.1
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR TCA 90 bp GAGCTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCAAGAAAGTCGCCTGCTaGAACCAGCCGGGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: ELLRGAQAAPPGALGSPFKKVAC*NQPGAL
Trigger: CAGGGCTCCCGGCTGGTTTCAGCAGGCGACTTTCTT...GAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000539890.1
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR TCA 90 bp CTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTGAAGAAAGTCGCCTGCTaGAACCAGCCGGGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: LLRGAQAAPPGALGSPFLKKVAC*NQPGAL
Trigger: CAGGGCTCCCGGCTGGTTTCAGCAGGCGACTTTCTT...CAGGAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000539890.1
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR TCA 90 bp AGCGGTCAGCTCCTCAGCAGAAGCTGCGTGGGCCGCCACTCCCCCTTTCTGCAAGAGGACCTGAGAGGCTaGCGCCAAGGAGTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: SGQLLSRSCVGRHSPFLQEDLRG*RQGVQK
Trigger: CTTCTGCACTCCTTGGCGTCAGCCTCTCAGGTCCTC...TTGCAGAAAGGGGGAGTGGCGGCCCACGCAGCTTCTGCTGAGGAGCTGACCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000546151.5
CDS-3UTR TCA 90 bp CTGAAACCAGCCGGGAGCCCTGGGAAGAGCAGAGCTTCTGAGGGGAGCACAGGCGAGGACCTGAGAGGCTaGCGCCAAGGAGTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LKPAGSPGKSRASEGSTGEDLRG*RQGVQK
Trigger: CTTCTGCACTCCTTGGCGTCAGCCTCTCAGGTCCTC...GCCTGTGCTCCCCTCAGAAGCTCTGCTCTTCCCAGGGCTCCCGGCTGGTTTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR GCA 90 bp CTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTGCTGCATCAGGTGCAGCGCTaGATGGAGGAGTTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LRGAQAAPPGALGSPFLLHQVQR*MEEFPG
Trigger: CCCTGGAAACTCCTCCATGCAGCGCTGCACCTGATG...CAGCAGGAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
CDS-3UTR GCA 90 bp CTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTGCTGACGAAGGCCATCAGGTaGAGCGCTGCATGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: LRGAQAAPPGALGSPFLLTKAIR*SAAWRS
Trigger: ACTCCTCCATGCAGCGCTGCACCTGATGGCCTTCGT...CAGCAGGAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
CDS-3UTR GCA 90 bp TCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTGCTCCACCAGCATCCCGGTaGTGTTGGCAAAGACCGCCT +
Preference number: 4 (lower is better)
Translates to: SEGSTGCTTRSSWEPLPAPPASR*CWQRPP
Trigger: AGGCGGTCTTTGCCAACAGCACCGGGATGCTGGTGG...AGCAGGAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000539890.1
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR GCA 90 bp GAGCTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCAGAGCAGATGAAGCCTaGTCTGTGGCGGGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: ELLRGAQAAPPGALGSPFRADEA*SVAGQP
Trigger: AGGCTGCCCCGCCACAGAGCAGGCTTCATCTGCTCT...GAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000546151.5
CDS-3UTR GCA 90 bp CTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTGAGAGCAGATGAAGCCTaGTCTGTGGCGGGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LLRGAQAAPPGALGSPFLRADEA*SVAGQP
Trigger: AGGCTGCCCCGCCACAGAGCAGGCTTCATCTGCTCT...CAGGAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000546151.5
CDS-3UTR GCA 90 bp GGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTGAGCAAGGCCAGACCTaGCCAGCGGGAGGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GQHPGKKSGPSIGRKSPAEQGQT*PAGGRK
Trigger: CTTCCTGCCTCCCGCTGGGCAGGTCTGGCCTTGCTC...AGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR GCA 90 bp TGGAGATGGGGAGCTGGTCATGGGACCCAGGTGCCTGGAGGACATCCCAGTGGCAGTGGCTCCCAGGGCTaGTGCACACTGGACACCACA +
Preference number: 4 (lower is better)
Translates to: WRWGAGHGTQVPGGHPSGSGSQG*CTLDTT
Trigger: TGTGGTGTCCAGTGTGCAGCAGCCCTGGGAGCCACT...GCCACTGGGATGTCCTCCAGGCACCTGGGTCCCATGACCAGCTCCCCATCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR CCA 90 bp CTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTGCAAAGACCGCCTCACTaGGCAGGCTGTGGTATGGCC +
Preference number: 4 (lower is better)
Translates to: LLRGAQAAPPGALGSPFLQRPPH*AGCGMA
Trigger: GGCCATACCACAGCCTGCCCAGTGAGGCGGTCTTTG...CAGGAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000539890.1
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CCA 90 bp AGCGGTCAGCTCCTCAGCAGAAGCTGCGTGGGCCGCCACTCCCCCTTTCTGCAAGCATCCCGGTGCTGTTaGCAAAGACCGCCTCACTGG +
Preference number: 4 (lower is better)
Translates to: SGQLLSRSCVGRHSPFLQASRCC*QRPPHW
Trigger: CCAGTGAGGCGGTCTTTGCCAACAGCACCGGGATGC...TTGCAGAAAGGGGGAGTGGCGGCCCACGCAGCTTCTGCTGAGGAGCTGACCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000546151.5
CDS-3UTR CCA 90 bp GAGCTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCGCATCCCGGTGCTGTTaGCAAAGACCGCCTCACTGG +
Preference number: 4 (lower is better)
Translates to: ELLRGAQAAPPGALGSPFASRCC*QRPPHW
Trigger: CCAGTGAGGCGGTCTTTGCCAACAGCACCGGGATGC...GAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000539890.1
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CCA 90 bp CTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTGGCATCCCGGTGCTGTTaGCAAAGACCGCCTCACTGG +
Preference number: 4 (lower is better)
Translates to: LLRGAQAAPPGALGSPFLASRCC*QRPPHW
Trigger: CCAGTGAGGCGGTCTTTGCCAACAGCACCGGGATGC...CAGGAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000539890.1
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CCA 90 bp CTGAAACCAGCCGGGAGCCCTGGGAAGAGCAGAGCTTCTGAGGGGAGCACAGGCGCATCCCGGTGCTGTTaGCAAAGACCGCCTCACTGG +
Preference number: 4 (lower is better)
Translates to: LKPAGSPGKSRASEGSTGASRCC*QRPPHW
Trigger: CCAGTGAGGCGGTCTTTGCCAACAGCACCGGGATGC...GCCTGTGCTCCCCTCAGAAGCTCTGCTCTTCCCAGGGCTCCCGGCTGGTTTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000539890.1
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CCA 90 bp GAGCTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCACCACCAGGAGCTCTTaGGAGCCCCTTCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: ELLRGAQAAPPGALGSPFTTRSS*EPLPAA
Trigger: AGCAGCAGGAAGGGGCTCCCAAGAGCTCCTGGTGGT...GAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000539890.1
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CCA 90 bp TCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTGCTACCACCAGGAGCTCTTaGGAGCCCCTTCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SEGSTGCTTRSSWEPLPATTRSS*EPLPAA
Trigger: AGCAGCAGGAAGGGGCTCCCAAGAGCTCCTGGTGGT...AGCAGGAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000539890.1
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CCA 90 bp TCCTCAGCAGAAGCTGCGTGGGCCGCCACTCCCCCTTTCTGCAATCACCCCATGTCAGCAGAAGCTGCGTaGGCCGCCACTCCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: SSAEAAWAATPPFCNHPMSAEAA*AATPPF
Trigger: GAAAGGGGGAGTGGCGGCCCACGCAGCTTCTGCTGA...CATGGGGTGATTGCAGAAAGGGGGAGTGGCGGCCCACGCAGCTTCTGCTGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000546151.5
CDS-3UTR CCA 90 bp GTAGGGCTGCCTGCCGGTGACAGACACGTAAGTCACAGGGAAAGGCCGGGATCCAGTGGTCAGAGGGGCTaGGGCCCTGCCAAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: VGLPAGDRHVSHRERPGSSGQRG*GPAKRA
Trigger: TGCTCTCTTGGCAGGGCCCCAGCCCCTCTGACCACT...GGATCCCGGCCTTTCCCTGTGACTTACGTGTCTGTCACCGGCAGGCAGCCCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR CCA 90 bp CTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTGCCAGGCAAGCAGCCATaGTGGGGCCAGGTGAAGCAA +
Preference number: 4 (lower is better)
Translates to: LLRGAQAAPPGALGSPFLPGKQP*WGQVKQ
Trigger: TTGCTTCACCTGGCCCCACCATGGCTGCTTGCCTGG...CAGGAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR CCA 90 bp CTGAAACCAGCCGGGAGCCCTGGGAAGAGCAGAGCTTCTGAGGGGAGCACAGGCGGCTGGGGTGGACGTTaGCCTGATGTTGCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: LKPAGSPGKSRASEGSTGGWGGR*PDVARS
Trigger: ACTCCTGGCAACATCAGGCCAACGTCCACCCCAGCC...GCCTGTGCTCCCCTCAGAAGCTCTGCTCTTCCCAGGGCTCCCGGCTGGTTTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR CCA 90 bp GAGGGCAGGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCAGGCCGTGCGCAGTGTaGGCGGGAGCCCTAAGTCAG +
Preference number: 4 (lower is better)
Translates to: EGRPAPRQEVWAQHWKKVRPCAV*AGALSQ
Trigger: CTGACTTAGGGCTCCCGCCCACACTGCGCACGGCCT...GACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCCTGCCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426130.6
CDS-3UTR CCA 90 bp CTTTATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGGATCCGGAGACCAGGGGTaGCCGGCTCCCAGCGCGCCA +
Preference number: 4 (lower is better)
Translates to: LYGGSGRTPHLPHVSHRGSGDQG*PAPSAP
Trigger: TGGCGCGCTGGGAGCCGGCCACCCCTGGTCTCCGGA...TCCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCATAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426130.6
CDS-3UTR CCA 90 bp TCCTCAGCAGAAGCTGCGTGGGCCGCCACTCCCCCTTTCTGCAATCACCCCATGATGCCTACAGCCGGCTaGCAATGCCGCCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: SSAEAAWAATPPFCNHPMMPTAG*QCRPRA
Trigger: TGCTCTGGGGCGGCATTGCCAGCCGGCTGTAGGCAT...CATGGGGTGATTGCAGAAAGGGGGAGTGGCGGCCCACGCAGCTTCTGCTGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000426130.6
ENST00000546151.5
CDS-3UTR TCA 90 bp AGAGCTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCAGAAGACACTGCCCTaGATGCCTACAGCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: RASEGSTGCTTRSSWEPLQKTLP*MPTAGW
Trigger: CCAGCCGGCTGTAGGCATTCAGGGCAGTGTCTTCTG...AAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000546151.5
CDS-3UTR TCA 90 bp AGAGCTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCAGCCCCACAACAGTaGGGACGAAGGCCATCAGGT +
Preference number: 4 (lower is better)
Translates to: RASEGSTGCTTRSSWEPLPAPQQ*GRRPSG
Trigger: ACCTGATGGCCTTCGTCCTCACTGTTGTGGGGCTGG...AAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
CDS-3UTR TCA 90 bp TCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTGAAACCAGCCGGGAGCCCTGGGAAGAGCAGAGCTTCTaGGGGGAGCACAGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: SGPSIGRKSPAETSREPWEEQSF*GEHRLH
Trigger: GTGCAGCCTGTGCTCCCCTCAGAAGCTCTGCTCTTC...CCAGGGCTCCCGGCTGGTTTCAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR GCA 90 bp CTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTGCATCAGGTGCAGCGCTaGATGGAGGAGTTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LLRGAQAAPPGALGSPFLHQVQR*MEEFPG
Trigger: CCCTGGAAACTCCTCCATGCAGCGCTGCACCTGATG...CAGGAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
CDS-3UTR GCA 90 bp CTGAAACCAGCCGGGAGCCCTGGGAAGAGCAGAGCTTCTGAGGGGAGCACAGGCACGAAGGCCATCAGGTaGAGCGCTGCATGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: LKPAGSPGKSRASEGSTGTKAIR*SAAWRS
Trigger: ACTCCTCCATGCAGCGCTGCACCTGATGGCCTTCGT...GCCTGTGCTCCCCTCAGAAGCTCTGCTCTTCCCAGGGCTCCCGGCTGGTTTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
CDS-3UTR GCA 90 bp CCTCGTGTGAATGGAGGACCTGAGAGGCTGACGCCAAGGAGTGCAGAAGCCAAACTCCTCAGCAGAAGCTaGGTGGGCCGCCACTCCCCC +
Preference number: 4 (lower is better)
Translates to: PRVNGGPERLTPRSAEAKLLSRS*VGRHSP
Trigger: GGGGGAGTGGCGGCCCACGCAGCTTCTGCTGAGGAG...TTTGGCTTCTGCACTCCTTGGCGTCAGCCTCTCAGGTCCTCCATTCACACGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000546151.5
CDS-3UTR GCA 90 bp GGCAGGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCCCAGGACTGCTGCGATaGATCAGCCCCGCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: GRPAPRQEVWAQHWKKVAPGLLR*ISPASH
Trigger: ATGAGAGGCGGGGCTGATGCATCGCAGCAGTCCTGG...GGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426130.6
CDS-3UTR GCA 90 bp GAGGGCAGGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGTCAGGGTCCAGGACTaGTGCGATGCATCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: EGRPAPRQEVWAQHWKKVVRVQD*CDASAP
Trigger: CGGGGCTGATGCATCGCAGCAGTCCTGGACCCTGAC...GACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCCTGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426130.6
CDS-3UTR GCA 90 bp CTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTGCTGTCTGAGTCCCAGCTCTaGCACTTACTGGCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: LRGAQAAPPGALGSPFLLSESQL*HLLAVC
Trigger: GCACACAGCCAGTAAGTGGCAGAGCTGGGACTCAGA...CAGCAGGAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR CCA 90 bp GAGGGCAGGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGTTTCCAGGGCAGTTTaGGCCCCACCCACGACTGGG +
Preference number: 4 (lower is better)
Translates to: EGRPAPRQEVWAQHWKKVVSRAV*APPTTG
Trigger: CCCAGTCGTGGGTGGGGCCCAAACTGCCCTGGAAAC...GACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCCTGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
CDS-3UTR CCA 90 bp GGCAGGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCCAAAGACCGCCTCACTaGGCAGGCTGTGGTATGGCC +
Preference number: 4 (lower is better)
Translates to: GRPAPRQEVWAQHWKKVAQRPPH*AGCGMA
Trigger: GGCCATACCACAGCCTGCCCAGTGAGGCGGTCTTTG...GGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CCA 90 bp GGATGTAGAGCACCAGCAGCCCAAAGGCCACCACCAGCATCCCGGTGCTGTTGGCAAAGACCGCCTCACTaGGCAGGCTGTGGTATGGCC +
Preference number: 4 (lower is better)
Translates to: GCRAPAAQRPPPASRCCWQRPPH*AGCGMA
Trigger: GGCCATACCACAGCCTGCCCAGTGAGGCGGTCTTTG...CCAACAGCACCGGGATGCTGGTGGTGGCCTTTGGGCTGCTGGTGCTCTACATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540755.5
ENST00000546151.5
CDS-3UTR CCA 90 bp GAGCTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCACCTCACATCCAGATaGGGCTGGATGGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: ELLRGAQAAPPGALGSPFHLTSR*GWMAEQ
Trigger: CTGCTCTGCCATCCAGCCCCATCTGGATGTGAGGTG...GAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000546151.5
CDS-3UTR CCA 90 bp AAGGCCACCACCAGCATCCCGGTGCTGTTGGCAAAGACCGCCTCACTGGGCAGGCACCTCACATCCAGATaGGGCTGGATGGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: KATTSIPVLLAKTASLGRHLTSR*GWMAEQ
Trigger: CTGCTCTGCCATCCAGCCCCATCTGGATGTGAGGTG...CCTGCCCAGTGAGGCGGTCTTTGCCAACAGCACCGGGATGCTGGTGGTGGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540755.5
ENST00000546151.5
CDS-3UTR CCA 90 bp TCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTGAAACCAGCCGGGAGCCCTGGGGCTGGGGTGGACGTTaGCCTGATGTTGCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: SGPSIGRKSPAETSREPWGWGGR*PDVARS
Trigger: ACTCCTGGCAACATCAGGCCAACGTCCACCCCAGCC...CCAGGGCTCCCGGCTGGTTTCAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR CCA 90 bp TGGAGATGGGGAGCTGGTCATGGGACCCAGGTGCCTGGAGGACATCCCAGTGGCCTACCCCTATGGAGATaGGGAGCTGGTCATGGGACC +
Preference number: 4 (lower is better)
Translates to: WRWGAGHGTQVPGGHPSGLPLWR*GAGHGT
Trigger: GGTCCCATGACCAGCTCCCCATCTCCATAGGGGTAG...GCCACTGGGATGTCCTCCAGGCACCTGGGTCCCATGACCAGCTCCCCATCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
3UTR CAA 72 bp CAGGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATaGGAAGAAAGTCGCCTGCTGAAACCAGCCGGGAGC +
Preference number: 4 (lower is better)
Translates to: QASTQARSLGPA*EESRLLKPAGS
Trigger: GCTCCCGGCTGGTTTCAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
3UTR CAA 72 bp AGCAGCCCAAAGGCCACCACCAGCATCCCGGTGCTGTaGGCAAAGACCGCCTCACTGGGCAGGCTGTGGTAT +
Preference number: 4 (lower is better)
Translates to: SSPKATTSIPVL*AKTASLGRLWY
Trigger: ATACCACAGCCTGCCCAGTGAGGCGGTCTTTGCCAACAGCACCGGGATGCTGGTGGTGGCCTTTGGGCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540755.5
ENST00000546151.5
CDS-3UTR TCA 90 bp CTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTGCTGGCACTGGGTGCCAGTTaGACATGTAGATGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: LRGAQAAPPGALGSPFLLALGAS*TCRCCH
Trigger: ATGGCAGCATCTACATGTTCAACTGGCACCCAGTGC...CAGCAGGAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000539890.1
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR TCA 90 bp GGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTGAGGAGGACCTCGTGTaGATGGAGGACCTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: GQHPGKKSGPSIGRKSPAEEDLV*MEDLRG
Trigger: GCCTCTCAGGTCCTCCATTCACACGAGGTCCTCCTC...AGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR TCA 90 bp CACTGGGATGCGCTGGTTTGGGACCAGTGCTCCCCATCAGCCACCCTAACTCCAGAGGAGGACCTCGTGTaGATGGAGGACCTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: HWDALVWDQCSPSATLTPEEDLV*MEDLRG
Trigger: GCCTCTCAGGTCCTCCATTCACACGAGGTCCTCCTC...TGGAGTTAGGGTGGCTGATGGGGAGCACTGGTCCCAAACCAGCGCATCCCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR TCA 90 bp AGCGGTCAGCTCCTCAGCAGAAGCTGCGTGGGCCGCCACTCCCCCTTTCTGCAACTAAGCACAGCAGTCTaGAGCTTGGGACCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: SGQLLSRSCVGRHSPFLQLSTAV*SLGPGS
Trigger: ACTGCCAGGTCCCAAGCTTCAGACTGCTGTGCTTAG...TTGCAGAAAGGGGGAGTGGCGGCCCACGCAGCTTCTGCTGAGGAGCTGACCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR TCA 90 bp GAGCTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTAAGCACAGCAGTCTaGAGCTTGGGACCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: ELLRGAQAAPPGALGSPFLSTAV*SLGPGS
Trigger: ACTGCCAGGTCCCAAGCTTCAGACTGCTGTGCTTAG...GAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR TCA 90 bp GAGCTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCGCGGAAATGTTCAGGTaGACGCGAAGCCTCCCACTA +
Preference number: 4 (lower is better)
Translates to: ELLRGAQAAPPGALGSPFAEMFR*TRSLPL
Trigger: TAGTGGGAGGCTTCGCGTTCACCTGAACATTTCCGC...GAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426130.6
CDS-3UTR TCA 90 bp ATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGGACTGCAGGCCTCCTGGGAAGTaGAGTCCGGAGACCAGGGGT +
Preference number: 4 (lower is better)
Translates to: MGEVDGHLTSLMFHTVDCRPPGK*SPETRG
Trigger: ACCCCTGGTCTCCGGACTTCACTTCCCAGGAGGCCT...GCAGTCCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426130.6
CDS-3UTR TCA 90 bp GCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTGAGAGGAAGACAGTGGTaGTGCCCAGCCAGCACCTCC +
Preference number: 4 (lower is better)
Translates to: ASTQARSLGPALEESRLLRGRQW*CPASTS
Trigger: GGAGGTGCTGGCTGGGCATCACCACTGTCTTCCTCT...CAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR GCA 90 bp CAGGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCCACCAGCATCCCGGTaGTGTTGGCAAAGACCGCCT +
Preference number: 4 (lower is better)
Translates to: QASTQARSLGPALEESRLPPASR*CWQRPP
Trigger: AGGCGGTCTTTGCCAACAGCACCGGGATGCTGGTGG...CAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR GCA 90 bp GGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTCCACCAGCATCCCGGTaGTGTTGGCAAAGACCGCCT +
Preference number: 4 (lower is better)
Translates to: GQHPGKKSGPSIGRKSPAPPASR*CWQRPP
Trigger: AGGCGGTCTTTGCCAACAGCACCGGGATGCTGGTGG...AGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR GCA 90 bp GGCAGGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCGGAGCCCCTTCCTGCTaGTTCACTCCCCATCATGCA +
Preference number: 4 (lower is better)
Translates to: GRPAPRQEVWAQHWKKVAGAPSC*FTPHHA
Trigger: TGCATGATGGGGAGTGAAGCAGCAGGAAGGGGCTCC...GGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR GCA 90 bp AGAGCTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTGGAGCCCCTTCCTGCTaGTTCACTCCCCATCATGCA +
Preference number: 4 (lower is better)
Translates to: RASEGSTGCTTRSSWEPLGAPSC*FTPHHA
Trigger: TGCATGATGGGGAGTGAAGCAGCAGGAAGGGGCTCC...AAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000539890.1
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR GCA 90 bp TCCTCAGCAGAAGCTGCGTGGGCCGCCACTCCCCCTTTCTGCAATCACCCCATGGGAGCCCCTTCCTGCTaGTTCACTCCCCATCATGCA +
Preference number: 4 (lower is better)
Translates to: SSAEAAWAATPPFCNHPMGAPSC*FTPHHA
Trigger: TGCATGATGGGGAGTGAAGCAGCAGGAAGGGGCTCC...CATGGGGTGATTGCAGAAAGGGGGAGTGGCGGCCCACGCAGCTTCTGCTGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000546151.5
CDS-3UTR GCA 90 bp GGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGGACTGCACTGAGGGGAGCACAGGCTaGACCACCAGGAGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: GEVDGHLTSLMFHTVDCTEGSTG*TTRSSW
Trigger: CCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTC...AGTGCAGTCCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR GCA 90 bp ATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGGACTGCGAGGGGAGCACAGGCTaGACCACCAGGAGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: MGEVDGHLTSLMFHTVDCEGSTG*TTRSSW
Trigger: CCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTC...GCAGTCCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CCA 90 bp CTGATGCTGCCAGAGAGTAGGTGGGCTCCAAACCCCAGGCTTCTCACTTGCTTAGGCCCCACCCACGACTaGGGCAGGCGGTACACCAGT +
Preference number: 4 (lower is better)
Translates to: LMLPESRWAPNPRLLTCLGPTHD*GRRYTS
Trigger: ACTGGTGTACCGCCTGCCCCAGTCGTGGGTGGGGCC...TAAGCAAGTGAGAAGCCTGGGGTTTGGAGCCCACCTACTCTCTGGCAGCATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR CCA 90 bp TCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTGAAACCAGCCGGGAGCCCTGGAGGTGCAGCGCTGCATaGAGGAGTTTCCAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: SGPSIGRKSPAETSREPWRCSAA*RSFQGS
Trigger: ACTGCCCTGGAAACTCCTCCATGCAGCGCTGCACCT...CCAGGGCTCCCGGCTGGTTTCAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
CDS-3UTR CCA 90 bp AGCGGTCAGCTCCTCAGCAGAAGCTGCGTGGGCCGCCACTCCCCCTTTCTGCAAAAGCCCAGGAACCACTaGCAGGCGAAGAGGAAGACA +
Preference number: 4 (lower is better)
Translates to: SGQLLSRSCVGRHSPFLQKPRNH*QAKRKT
Trigger: TGTCTTCCTCTTCGCCTGCCAGTGGTTCCTGGGCTT...TTGCAGAAAGGGGGAGTGGCGGCCCACGCAGCTTCTGCTGAGGAGCTGACCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000546151.5
CDS-3UTR CCA 90 bp GAGCTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCTCACTGGGCAGGCTGTaGTATGGCCTGGTGGTGTTT +
Preference number: 4 (lower is better)
Translates to: ELLRGAQAAPPGALGSPFSLGRL*YGLVVF
Trigger: AAACACCACCAGGCCATACCACAGCCTGCCCAGTGA...GAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000539890.1
ENST00000540755.5
ENST00000546151.5
CDS-3UTR CCA 90 bp CTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTGCTGCCCAGGCAAGAAGTCTaGGCCCAGCATTGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: LRGAQAAPPGALGSPFLLPRQEV*AQHWKK
Trigger: TTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGG...CAGCAGGAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CCA 90 bp AGAGCTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTTTATGGGGGAAGTaGACGGACACCTCACCTCCC +
Preference number: 4 (lower is better)
Translates to: RASEGSTGCTTRSSWEPLPLWGK*TDTSPP
Trigger: GGGAGGTGAGGTGTCCGTCCACTTCCCCCATAAAGG...AAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAGCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CCA 90 bp GAGCTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCGCTACTGGGACATCTaGGGACAGGCTCTGTTCTTG +
Preference number: 4 (lower is better)
Translates to: ELLRGAQAAPPGALGSPFRYWDI*GQALFL
Trigger: CAAGAACAGAGCCTGTCCCCAGATGTCCCAGTAGCG...GAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR CCA 90 bp TCCTCAGCAGAAGCTGCGTGGGCCGCCACTCCCCCTTTCTGCAATCACCCCATGCACAGAACGCTAGGTTaGGCCAGGCAAGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: SSAEAAWAATPPFCNHPMHRTLG*ARQAAM
Trigger: CATGGCTGCTTGCCTGGCCCAACCTAGCGTTCTGTG...CATGGGGTGATTGCAGAAAGGGGGAGTGGCGGCCCACGCAGCTTCTGCTGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR CCA 90 bp CTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTGCAGCAGTCTGAAGCTTaGGACCTGGCAGTGCGTCTT +
Preference number: 4 (lower is better)
Translates to: LLRGAQAAPPGALGSPFLQQSEA*DLAVRL
Trigger: AAGACGCACTGCCAGGTCCCAAGCTTCAGACTGCTG...CAGGAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR CCA 90 bp GAGCTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCGGGCAGGCTGTGGTATaGCCTGGTGGTGTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: ELLRGAQAAPPGALGSPFGQAVV*PGGVFP
Trigger: TGGAAAAACACCACCAGGCCATACCACAGCCTGCCC...GAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539890.1
CDS-3UTR CCA 90 bp TCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTGCTGGGCAGGCTGTGGTATaGCCTGGTGGTGTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: SEGSTGCTTRSSWEPLPAGQAVV*PGGVFP
Trigger: AGGAAAAACACCACCAGGCCATACCACAGCCTGCCC...AGCAGGAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR CCA 90 bp AGCGGTCAGCTCCTCAGCAGAAGCTGCGTGGGCCGCCACTCCCCCTTTCTGCAATCCCACCCTGGAATGTaGGACTGGAACCCATACCTG +
Preference number: 4 (lower is better)
Translates to: SGQLLSRSCVGRHSPFLQSHPGM*DWNPYL
Trigger: CAGGTATGGGTTCCAGTCCCACATTCCAGGGTGGGA...TTGCAGAAAGGGGGAGTGGCGGCCCACGCAGCTTCTGCTGAGGAGCTGACCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR CCA 90 bp CAGCAGCCCAAAGGCCACCACCAGCATCCCGGTGCTGTTGGCAAAGACCGCCTCGTCCCAGCATTTCACTaGGATGCGCTGGTTTGGGAC +
Preference number: 4 (lower is better)
Translates to: QQPKGHHQHPGAVGKDRLVPAFH*DALVWD
Trigger: GTCCCAAACCAGCGCATCCCAGTGAAATGCTGGGAC...GAGGCGGTCTTTGCCAACAGCACCGGGATGCTGGTGGTGGCCTTTGGGCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR CAA 72 bp CTGGGGAGTCCCAGCATTTCACTGGGATGCGCTGGTTaGGGACCAGTGCTCCCCATCAGCCACCCTAACTCC +
Preference number: 4 (lower is better)
Translates to: LGSPSISLGCAG*GPVLPISHPNS
Trigger: GGAGTTAGGGTGGCTGATGGGGAGCACTGGTCCCAAACCAGCGCATCCCAGTGAAATGCTGGGACTCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR TCA 90 bp TCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTGCTGTCCAGACACCATTCTaGTCACGCACTCCTTTAGCC +
Preference number: 4 (lower is better)
Translates to: SEGSTGCTTRSSWEPLPAVQTPF*SRTPLA
Trigger: GGCTAAAGGAGTGCGTGATCAGAATGGTGTCTGGAC...AGCAGGAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294072.9
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR TCA 90 bp CTGAAACCAGCCGGGAGCCCTGGGAAGAGCAGAGCTTCTGAGGGGAGCACAGGCGCACTGGGTGCCAGTTaGACATGTAGATGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: LKPAGSPGKSRASEGSTGALGAS*TCRCCH
Trigger: ATGGCAGCATCTACATGTTCAACTGGCACCCAGTGC...GCCTGTGCTCCCCTCAGAAGCTCTGCTCTTCCCAGGGCTCCCGGCTGGTTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000539890.1
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR TCA 90 bp TCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTGCTTGGGCGCTTCCAAGATaGAGCCAGAAGGATGTAGAG +
Preference number: 4 (lower is better)
Translates to: SEGSTGCTTRSSWEPLPAWALPR*SQKDVE
Trigger: CTCTACATCCTTCTGGCTTCATCTTGGAAGCGCCCA...AGCAGGAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000539890.1
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR TCA 90 bp CAGGAGTCACACCAGGCCCAAGCTGTTCAGACAGACCCCCAGCCTGCAGGGTGGTGGGCGCTTCCAAGATaGAGCCAGAAGGATGTAGAG +
Preference number: 4 (lower is better)
Translates to: QESHQAQAVQTDPQPAGWWALPR*SQKDVE
Trigger: CTCTACATCCTTCTGGCTTCATCTTGGAAGCGCCCA...CCACCCTGCAGGCTGGGGGTCTGTCTGAACAGCTTGGGCCTGGTGTGACTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR TCA 90 bp CAGGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGACCGTGGACTGCACTTaGGTCCCAGCTCTTCACCAC +
Preference number: 4 (lower is better)
Translates to: QASTQARSLGPALEESRLTVDCT*VPALHH
Trigger: GTGGTGAAGAGCTGGGACTCAAGTGCAGTCCACGGT...CAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR TCA 90 bp TCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTGAAACCAGCCGGGAGCCCTGGACATCCCAGTGGCTTTaGAGGCTCCAGCCAGTCAAG +
Preference number: 4 (lower is better)
Translates to: SGPSIGRKSPAETSREPWTSQWL*RLQPVK
Trigger: CTTGACTGGCTGGAGCCTTCAAAGCCACTGGGATGT...CCAGGGCTCCCGGCTGGTTTCAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR TCA 90 bp AGAGCTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTACATCCCAGTGGCTTTaGAGGCTCCAGCCAGTCAAG +
Preference number: 4 (lower is better)
Translates to: RASEGSTGCTTRSSWEPLTSQWL*RLQPVK
Trigger: CTTGACTGGCTGGAGCCTTCAAAGCCACTGGGATGT...AAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR TCA 90 bp AGCGGTCAGCTCCTCAGCAGAAGCTGCGTGGGCCGCCACTCCCCCTTTCTGCAAAGCTGTCTCCAGCCCTaGGACTTCTGCTTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: SGQLLSRSCVGRHSPFLQSCLQP*DFCFLF
Trigger: GAAGAGAAAGCAGAAGTCTCAGGGCTGGAGACAGCT...TTGCAGAAAGGGGGAGTGGCGGCCCACGCAGCTTCTGCTGAGGAGCTGACCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426130.6
CDS-3UTR TCA 90 bp CTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTGCTGGTCCAGACACCATTCTaGTCACGCACTCCTAGAAGA +
Preference number: 4 (lower is better)
Translates to: LRGAQAAPPGALGSPFLLVQTPF*SRTPRR
Trigger: TCTTCTAGGAGTGCGTGATCAGAATGGTGTCTGGAC...CAGCAGGAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539890.1
CDS-3UTR TCA 90 bp TCCTCAGCAGAAGCTGCGTGGGCCGCCACTCCCCCTTTCTGCAATCACCCCATGGTCACTAACAGAGGGTaGGAAAACCTTCCCGGGTCC +
Preference number: 4 (lower is better)
Translates to: SSAEAAWAATPPFCNHPMVTNRG*ENLPGS
Trigger: GGACCCGGGAAGGTTTTCTCACCCTCTGTTAGTGAC...CATGGGGTGATTGCAGAAAGGGGGAGTGGCGGCCCACGCAGCTTCTGCTGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR TCA 90 bp GGCAGGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCGGCAGGAGAATTGCTTaGACCCAGCAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: GRPAPRQEVWAQHWKKVAGRRIA*TQQVEV
Trigger: AACCTCCACCTGCTGGGTTCAAGCAATTCTCCTGCC...GGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR TCA 90 bp TCCTCAGCAGAAGCTGCGTGGGCCGCCACTCCCCCTTTCTGCAATCACCCCATGCATCAAGACCTGCTCTaGGCACTCAGCTGGTCACCA +
Preference number: 4 (lower is better)
Translates to: SSAEAAWAATPPFCNHPMHQDLL*ALSWSP
Trigger: TGGTGACCAGCTGAGTGCTCAGAGCAGGTCTTGATG...CATGGGGTGATTGCAGAAAGGGGGAGTGGCGGCCCACGCAGCTTCTGCTGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR GCA 90 bp GGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGGACTGCACTCCACCAGCATCCCGGTaGTGTTGGCAAAGACCGCCT +
Preference number: 4 (lower is better)
Translates to: GEVDGHLTSLMFHTVDCTPPASR*CWQRPP
Trigger: AGGCGGTCTTTGCCAACAGCACCGGGATGCTGGTGG...AGTGCAGTCCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR GCA 90 bp GGCAGGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCGCTGACGCCAAGGAGTaGAGAAGCCAAAGCCACCAA +
Preference number: 4 (lower is better)
Translates to: GRPAPRQEVWAQHWKKVAADAKE*RSQSHQ
Trigger: TTGGTGGCTTTGGCTTCTGCACTCCTTGGCGTCAGC...GGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR GCA 90 bp AGCGGTCAGCTCCTCAGCAGAAGCTGCGTGGGCCGCCACTCCCCCTTTCTGCAAGCCACTCCCCCTTTCTaGAATCACCCCATGATGTCT +
Preference number: 4 (lower is better)
Translates to: SGQLLSRSCVGRHSPFLQATPPF*NHPMMS
Trigger: AGACATCATGGGGTGATTGCAGAAAGGGGGAGTGGC...TTGCAGAAAGGGGGAGTGGCGGCCCACGCAGCTTCTGCTGAGGAGCTGACCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000546151.5
CDS-3UTR GCA 90 bp CTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTGGCCACTCCCCCTTTCTaGAATCACCCCATGATGTCT +
Preference number: 4 (lower is better)
Translates to: LLRGAQAAPPGALGSPFLATPPF*NHPMMS
Trigger: AGACATCATGGGGTGATTGCAGAAAGGGGGAGTGGC...CAGGAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000546151.5
CDS-3UTR GCA 90 bp CCGTGGACTGCACTTGAGTCCCAGCTCTTCACCACATCCCTAGGAGTCTTAAGACTCCTCAGCAGAAGCTaGGTGGGCCGCCACTCCCCC +
Preference number: 4 (lower is better)
Translates to: PWTALESQLFTTSLGVLRLLSRS*VGRHSP
Trigger: GGGGGAGTGGCGGCCCACGCAGCTTCTGCTGAGGAG...TCTTAAGACTCCTAGGGATGTGGTGAAGAGCTGGGACTCAAGTGCAGTCCACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000546151.5
CDS-3UTR GCA 90 bp GCACACCTTTATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACGAGGGGCTGGGGCCCTaGCAAGAGAGCAAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: AHLYGGSGRTPHLPHVSHEGLGP*QESKAR
Trigger: TCTGGCCTTGCTCTCTTGGCAGGGCCCCAGCCCCTC...GTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCATAAAGGTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR CCA 90 bp GAGCTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTCAGAGAACTGGCCTaGGCTCCAATTCCTGCGAAA +
Preference number: 4 (lower is better)
Translates to: ELLRGAQAAPPGALGSPFLRELA*APIPAK
Trigger: TTTCGCAGGAATTGGAGCCCAGGCCAGTTCTCTGAG...GAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CCA 90 bp CTGAAACCAGCCGGGAGCCCTGGGAAGAGCAGAGCTTCTGAGGGGAGCACAGGCCTCAGAGAACTGGCCTaGGCTCCAATTCCTGCGAAA +
Preference number: 4 (lower is better)
Translates to: LKPAGSPGKSRASEGSTGLRELA*APIPAK
Trigger: TTTCGCAGGAATTGGAGCCCAGGCCAGTTCTCTGAG...GCCTGTGCTCCCCTCAGAAGCTCTGCTCTTCCCAGGGCTCCCGGCTGGTTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CCA 90 bp CATAAACCAGTGAAATGCCTACCCCTATGGAGATGGGGAGCTGGTCATGGGACCGGCCCCACCCACGACTaGGGCAGGCGGTACACCAGT +
Preference number: 4 (lower is better)
Translates to: HKPVKCLPLWRWGAGHGTGPTHD*GRRYTS
Trigger: ACTGGTGTACCGCCTGCCCCAGTCGTGGGTGGGGCC...GGTCCCATGACCAGCTCCCCATCTCCATAGGGGTAGGCATTTCACTGGTTTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR CCA 90 bp TCAGCAGAAGCTGCGTGGGCCGCCACTCCCCCTTTCTGCAATCACCCCATGATGAGGTGCAGCGCTGCATaGAGGAGTTTCCAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: SAEAAWAATPPFCNHPMMRCSAA*RSFQGS
Trigger: ACTGCCCTGGAAACTCCTCCATGCAGCGCTGCACCT...CATCATGGGGTGATTGCAGAAAGGGGGAGTGGCGGCCCACGCAGCTTCTGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR CCA 90 bp GGCAGGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCAAGCCCAGGAACCACTaGCAGGCGAAGAGGAAGACA +
Preference number: 4 (lower is better)
Translates to: GRPAPRQEVWAQHWKKVAKPRNH*QAKRKT
Trigger: TGTCTTCCTCTTCGCCTGCCAGTGGTTCCTGGGCTT...GGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000546151.5
CDS-3UTR CCA 90 bp GAGCTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCGGGCAGGCTGTGGTATaGCCTGGTGGTGTTTTTCAA +
Preference number: 4 (lower is better)
Translates to: ELLRGAQAAPPGALGSPFGQAVV*PGGVFQ
Trigger: TTGAAAAACACCACCAGGCCATACCACAGCCTGCCC...GAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000540755.5
CDS-3UTR CCA 90 bp CCAGAGCGAGGAGGACCTCGTGTGAATGGAGGACCTGAGAGGCTGACGCCAAGGTCACTGGGCAGGCTGTaGTATGGCCTGGTGGTGTTT +
Preference number: 4 (lower is better)
Translates to: PERGGPRVNGGPERLTPRSLGRL*YGLVVF
Trigger: AAACACCACCAGGCCATACCACAGCCTGCCCAGTGA...CCTTGGCGTCAGCCTCTCAGGTCCTCCATTCACACGAGGTCCTCCTCGCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000546151.5
CDS-3UTR CCA 90 bp TCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTGCTCCCAGGCAAGAAGTCTaGGCCCAGCATTGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: SEGSTGCTTRSSWEPLPAPRQEV*AQHWKK
Trigger: TTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGG...AGCAGGAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CCA 90 bp CAGGAGTCACACCAGGCCCAAGCTGTTCAGACAGACCCCCAGCCTGCAGGGTGGCCCAGGCAAGAAGTCTaGGCCCAGCATTGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: QESHQAQAVQTDPQPAGWPRQEV*AQHWKK
Trigger: TTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGG...CCACCCTGCAGGCTGGGGGTCTGTCTGAACAGCTTGGGCCTGGTGTGACTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR CCA 90 bp CTGAAACCAGCCGGGAGCCCTGGGAAGAGCAGAGCTTCTGAGGGGAGCACAGGCACATCCAGATGGGGCTaGATGGCAGAGCAGATGAAG +
Preference number: 4 (lower is better)
Translates to: LKPAGSPGKSRASEGSTGTSRWG*MAEQMK
Trigger: CTTCATCTGCTCTGCCATCCAGCCCCATCTGGATGT...GCCTGTGCTCCCCTCAGAAGCTCTGCTCTTCCCAGGGCTCCCGGCTGGTTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000546151.5
CDS-3UTR CCA 90 bp TCAGCAGAAGCTGCGTGGGCCGCCACTCCCCCTTTCTGCAATCACCCCATGATGCACCTCACATCCAGATaGGGCTGGATGGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: SAEAAWAATPPFCNHPMMHLTSR*GWMAEQ
Trigger: CTGCTCTGCCATCCAGCCCCATCTGGATGTGAGGTG...CATCATGGGGTGATTGCAGAAAGGGGGAGTGGCGGCCCACGCAGCTTCTGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000546151.5
CDS-3UTR CCA 90 bp AGAGCTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTAGCAGCTGGAAGAGGTaGAGCCGCACGGTCACAATA +
Preference number: 4 (lower is better)
Translates to: RASEGSTGCTTRSSWEPLSSWKR*SRTVTI
Trigger: TATTGTGACCGTGCGGCTCCACCTCTTCCAGCTGCT...AAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR CCA 90 bp TCCTCAGCAGAAGCTGCGTGGGCCGCCACTCCCCCTTTCTGCAATCACCCCATGCCTTCTGCCAACATCTaGCAATGTGAGGCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: SSAEAAWAATPPFCNHPMPSANI*QCEAGV
Trigger: CACCCCAGCCTCACATTGCCAGATGTTGGCAGAAGG...CATGGGGTGATTGCAGAAAGGGGGAGTGGCGGCCCACGCAGCTTCTGCTGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR CCA 90 bp ATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGGACTGCATGGAGATGGGGAGCTaGTCATGGGACCCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: MGEVDGHLTSLMFHTVDCMEMGS*SWDPGA
Trigger: GGCACCTGGGTCCCATGACCAGCTCCCCATCTCCAT...GCAGTCCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR CCA 90 bp AGAGCTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTGGCTGTGGTATGGCCTaGTGGTGTTTTTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: RASEGSTGCTTRSSWEPLGCGMA*WCFSTS
Trigger: GGAGGTGGAAAAACACCACCAGGCCATACCACAGCC...AAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539890.1
CDS-3UTR CCA 90 bp CAGGAGTCACACCAGGCCCAAGCTGTTCAGACAGACCCCCAGCCTGCAGGGTGGCCTGGAATGTGGGACTaGAACCCATACCTGTCTGTC +
Preference number: 4 (lower is better)
Translates to: QESHQAQAVQTDPQPAGWPGMWD*NPYLSV
Trigger: GACAGACAGGTATGGGTTCCAGTCCCACATTCCAGG...CCACCCTGCAGGCTGGGGGTCTGTCTGAACAGCTTGGGCCTGGTGTGACTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR CCA 90 bp TCAGCAGAAGCTGCGTGGGCCGCCACTCCCCCTTTCTGCAATCACCCCATGATGTGGGATGCGCTGGTTTaGGACCAGTGCTCCCCATCA +
Preference number: 4 (lower is better)
Translates to: SAEAAWAATPPFCNHPMMWDALV*DQCSPS
Trigger: TGATGGGGAGCACTGGTCCCAAACCAGCGCATCCCA...CATCATGGGGTGATTGCAGAAAGGGGGAGTGGCGGCCCACGCAGCTTCTGCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR CCA 90 bp CACTGGGATGCGCTGGTTTGGGACCAGTGCTCCCCATCAGCCACCCTAACTCCATCATGCAGCAGGGGCTaGAAAGAGAGGCAGATGCCC +
Preference number: 4 (lower is better)
Translates to: HWDALVWDQCSPSATLTPSCSRG*KERQMP
Trigger: GGGCATCTGCCTCTCTTTCCAGCCCCTGCTGCATGA...TGGAGTTAGGGTGGCTGATGGGGAGCACTGGTCCCAAACCAGCGCATCCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR TCA 90 bp AGAGCTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTGCACTGGGTGCCAGTTaGACATGTAGATGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: RASEGSTGCTTRSSWEPLALGAS*TCRCCH
Trigger: ATGGCAGCATCTACATGTTCAACTGGCACCCAGTGC...AAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000539890.1
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR TCA 90 bp GTAGGGCTGCCTGCCGGTGACAGACACGTAAGTCACAGGGAAAGGCCGGGATCCTGGGCGCTTCCAAGATaGAGCCAGAAGGATGTAGAG +
Preference number: 4 (lower is better)
Translates to: VGLPAGDRHVSHRERPGSWALPR*SQKDVE
Trigger: CTCTACATCCTTCTGGCTTCATCTTGGAAGCGCCCA...GGATCCCGGCCTTTCCCTGTGACTTACGTGTCTGTCACCGGCAGGCAGCCCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR TCA 90 bp AGAGCTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTTGGGCGCTTCCAAGATaGAGCCAGAAGGATGTAGAG +
Preference number: 4 (lower is better)
Translates to: RASEGSTGCTTRSSWEPLWALPR*SQKDVE
Trigger: CTCTACATCCTTCTGGCTTCATCTTGGAAGCGCCCA...AAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000539890.1
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR TCA 90 bp CAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTGAAGAAGAGCAGAGCTTCTaGGGGGAGCACAGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: QHPGKKSGPSIGRKSPAEEEQSF*GEHRLH
Trigger: GTGCAGCCTGTGCTCCCCTCAGAAGCTCTGCTCTTC...TTCAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR TCA 90 bp CAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTGAAGAGGACCTGAGAGGCTaGCGCCAAGGAGTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: QHPGKKSGPSIGRKSPAEEDLRG*RQGVQK
Trigger: CTTCTGCACTCCTTGGCGTCAGCCTCTCAGGTCCTC...TTCAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR TCA 90 bp CCTCGTGTGAATGGAGGACCTGAGAGGCTGACGCCAAGGAGTGCAGAAGCCAAAGAGGACCTGAGAGGCTaGCGCCAAGGAGTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PRVNGGPERLTPRSAEAKEDLRG*RQGVQK
Trigger: CTTCTGCACTCCTTGGCGTCAGCCTCTCAGGTCCTC...TTTGGCTTCTGCACTCCTTGGCGTCAGCCTCTCAGGTCCTCCATTCACACGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR TCA 90 bp GGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGGACTGCACTACCGTGGACTGCACTTaGGTCCCAGCTCTTCACCAC +
Preference number: 4 (lower is better)
Translates to: GEVDGHLTSLMFHTVDCTTVDCT*VPALHH
Trigger: GTGGTGAAGAGCTGGGACTCAAGTGCAGTCCACGGT...AGTGCAGTCCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR TCA 90 bp CCTCGTGTGAATGGAGGACCTGAGAGGCTGACGCCAAGGAGTGCAGAAGCCAAAAGGGCTGCCTGCCGGTaGCAGACACGTAAGTCACAG +
Preference number: 4 (lower is better)
Translates to: PRVNGGPERLTPRSAEAKRAACR*QTRKSQ
Trigger: CTGTGACTTACGTGTCTGTCACCGGCAGGCAGCCCT...TTTGGCTTCTGCACTCCTTGGCGTCAGCCTCTCAGGTCCTCCATTCACACGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR TCA 90 bp CAGGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCCAGGAGTAGGATGCTaGTGCTGCCAGAGAGTAGGT +
Preference number: 4 (lower is better)
Translates to: QASTQARSLGPALEESRLPGVGC*CCQRVG
Trigger: ACCTACTCTCTGGCAGCATCAGCATCCTACTCCTGG...CAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR TCA 90 bp ATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGGACTGCCAACATCTGGCAATGTaGGGCTGGGGTGGACGTTGG +
Preference number: 4 (lower is better)
Translates to: MGEVDGHLTSLMFHTVDCQHLAM*GWGGRW
Trigger: CCAACGTCCACCCCAGCCTCACATTGCCAGATGTTG...GCAGTCCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR GCA 90 bp ATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGGACTGCACGAAGGCCATCAGGTaGAGCGCTGCATGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: MGEVDGHLTSLMFHTVDCTKAIR*SAAWRS
Trigger: ACTCCTCCATGCAGCGCTGCACCTGATGGCCTTCGT...GCAGTCCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR GCA 90 bp CAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTGAACCACCAGCATCCCGGTaGTGTTGGCAAAGACCGCCT +
Preference number: 4 (lower is better)
Translates to: QHPGKKSGPSIGRKSPAEPPASR*CWQRPP
Trigger: AGGCGGTCTTTGCCAACAGCACCGGGATGCTGGTGG...TTCAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR GCA 90 bp CAGGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGGCTGACGCCAAGGAGTaGAGAAGCCAAAGCCACCAA +
Preference number: 4 (lower is better)
Translates to: QASTQARSLGPALEESRLADAKE*RSQSHQ
Trigger: TTGGTGGCTTTGGCTTCTGCACTCCTTGGCGTCAGC...CAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR GCA 90 bp GCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTGGCTGACGCCAAGGAGTaGAGAAGCCAAAGCCACCAA +
Preference number: 4 (lower is better)
Translates to: ASTQARSLGPALEESRLLADAKE*RSQSHQ
Trigger: TTGGTGGCTTTGGCTTCTGCACTCCTTGGCGTCAGC...CAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR GCA 90 bp GTAGGGCTGCCTGCCGGTGACAGACACGTAAGTCACAGGGAAAGGCCGGGATCCGCCACTCCCCCTTTCTaGAATCACCCCATGATGTCT +
Preference number: 4 (lower is better)
Translates to: VGLPAGDRHVSHRERPGSATPPF*NHPMMS
Trigger: AGACATCATGGGGTGATTGCAGAAAGGGGGAGTGGC...GGATCCCGGCCTTTCCCTGTGACTTACGTGTCTGTCACCGGCAGGCAGCCCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR GCA 90 bp GGATGTAGAGCACCAGCAGCCCAAAGGCCACCACCAGCATCCCGGTGCTGTTGGGCCACTCCCCCTTTCTaGAATCACCCCATGATGTCT +
Preference number: 4 (lower is better)
Translates to: GCRAPAAQRPPPASRCCWATPPF*NHPMMS
Trigger: AGACATCATGGGGTGATTGCAGAAAGGGGGAGTGGC...CCAACAGCACCGGGATGCTGGTGGTGGCCTTTGGGCTGCTGGTGCTCTACATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000540755.5
ENST00000546151.5
CDS-3UTR GCA 90 bp AGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGGTGGGAGGGGCTGGGGCCCTaGCAAGAGAGCAAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: RRSILALLPTSGNVRLGWEGLGP*QESKAR
Trigger: TCTGGCCTTGCTCTCTTGGCAGGGCCCCAGCCCCTC...CCACCCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR GCA 90 bp CATAAACCAGTGAAATGCCTACCCCTATGGAGATGGGGAGCTGGTCATGGGACCGAGGGGCTGGGGCCCTaGCAAGAGAGCAAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: HKPVKCLPLWRWGAGHGTEGLGP*QESKAR
Trigger: TCTGGCCTTGCTCTCTTGGCAGGGCCCCAGCCCCTC...GGTCCCATGACCAGCTCCCCATCTCCATAGGGGTAGGCATTTCACTGGTTTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR GCA 90 bp AGCGGTCAGCTCCTCAGCAGAAGCTGCGTGGGCCGCCACTCCCCCTTTCTGCAACCCAGGCTTCTCACTTaGTTACTAAGCACAGCAGTC +
Preference number: 4 (lower is better)
Translates to: SGQLLSRSCVGRHSPFLQPRLLT*LLSTAV
Trigger: GACTGCTGTGCTTAGTAAGCAAGTGAGAAGCCTGGG...TTGCAGAAAGGGGGAGTGGCGGCCCACGCAGCTTCTGCTGAGGAGCTGACCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR GCA 90 bp GTCAAGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGACAGCCGGCTGGCAATaGCGCCCCAGAGCAGAGCGG +
Preference number: 4 (lower is better)
Translates to: VKTVNISPSANIWQCEAGTAGWQ*RPRAER
Trigger: CCGCTCTGCTCTGGGGCGGCATTGCCAGCCGGCTGT...CCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426130.6
ENST00000447532.6
CDS-3UTR GCA 90 bp GGCAGGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCCATCCCATCAAGACCTaGTCTGAGCACTCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: GRPAPRQEVWAQHWKKVAHPIKT*SEHSAG
Trigger: ACCAGCTGAGTGCTCAGAGCAGGTCTTGATGGGATG...GGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR GCA 90 bp AGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTGAAAGACAGACCCCCAGCCTaGAGGGTGGTCCCCATCCAA +
Preference number: 4 (lower is better)
Translates to: STQARSLGPALEESRLLKDRPPA*RVVPIQ
Trigger: TTGGATGGGGACCACCCTGCAGGCTGGGGGTCTGTC...TTTCAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR CCA 90 bp CTGAAACCAGCCGGGAGCCCTGGGAAGAGCAGAGCTTCTGAGGGGAGCACAGGCGAAGGGAGTAGAGGTTaGCAGTCCTTCCATGGTTGT +
Preference number: 4 (lower is better)
Translates to: LKPAGSPGKSRASEGSTGEGSRG*QSFHGC
Trigger: ACAACCATGGAAGGACTGCCAACCTCTACTCCCTTC...GCCTGTGCTCCCCTCAGAAGCTCTGCTCTTCCCAGGGCTCCCGGCTGGTTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
CDS-3UTR CCA 90 bp GAGGGCAGGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCAAGCCCAGGAACCACTaGCAGGCGAAGAGGAAGACA +
Preference number: 4 (lower is better)
Translates to: EGRPAPRQEVWAQHWKKVKPRNH*QAKRKT
Trigger: TGTCTTCCTCTTCGCCTGCCAGTGGTTCCTGGGCTT...GACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCCTGCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000546151.5
CDS-3UTR CCA 90 bp TCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTGAAACCAGCCGGGAGCCCTGGGGGCAGGCTGTGGTATaGCCTGGTGGTGTTTTTCAA +
Preference number: 4 (lower is better)
Translates to: SGPSIGRKSPAETSREPWGQAVV*PGGVFQ
Trigger: TTGAAAAACACCACCAGGCCATACCACAGCCTGCCC...CCAGGGCTCCCGGCTGGTTTCAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000540755.5
CDS-3UTR CCA 90 bp TCAGCAGAAGCTGCGTGGGCCGCCACTCCCCCTTTCTGCAATCACCCCATGATGTCACTGGGCAGGCTGTaGTATGGCCTGGTGGTGTTT +
Preference number: 4 (lower is better)
Translates to: SAEAAWAATPPFCNHPMMSLGRL*YGLVVF
Trigger: AAACACCACCAGGCCATACCACAGCCTGCCCAGTGA...CATCATGGGGTGATTGCAGAAAGGGGGAGTGGCGGCCCACGCAGCTTCTGCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000546151.5
CDS-3UTR CCA 90 bp GGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTTCACTGGGCAGGCTGTaGTATGGCCTGGTGGTGTTT +
Preference number: 4 (lower is better)
Translates to: GQHPGKKSGPSIGRKSPASLGRL*YGLVVF
Trigger: AAACACCACCAGGCCATACCACAGCCTGCCCAGTGA...AGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000540755.5
ENST00000546151.5
CDS-3UTR CCA 90 bp CCTTTATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGGACCACCAGGAGCTCTTaGGAGCCCCTTCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: PLWGKWTDTSPPSCFTPWTTRSS*EPLPAA
Trigger: AGCAGCAGGAAGGGGCTCCCAAGAGCTCCTGGTGGT...CCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCATAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CCA 90 bp AAGGCCACCACCAGCATCCCGGTGCTGTTGGCAAAGACCGCCTCACTGGGCAGGTCATGTTTCACACCGTaGACTGCACTTGAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: KATTSIPVLLAKTASLGRSCFTP*TALESQ
Trigger: CTGGGACTCAAGTGCAGTCCACGGTGTGAAACATGA...CCTGCCCAGTGAGGCGGTCTTTGCCAACAGCACCGGGATGCTGGTGGTGGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540755.5
ENST00000546151.5
CDS-3UTR CCA 90 bp GGATGTAGAGCACCAGCAGCCCAAAGGCCACCACCAGCATCCCGGTGCTGTTGGACATCCAGATGGGGCTaGATGGCAGAGCAGATGAAG +
Preference number: 4 (lower is better)
Translates to: GCRAPAAQRPPPASRCCWTSRWG*MAEQMK
Trigger: CTTCATCTGCTCTGCCATCCAGCCCCATCTGGATGT...CCAACAGCACCGGGATGCTGGTGGTGGCCTTTGGGCTGCTGGTGCTCTACATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540755.5
ENST00000546151.5
CDS-3UTR CCA 90 bp CTTTATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGGAAGTGGTCAGAGGGGCTaGGGCCCTGCCAAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: LYGGSGRTPHLPHVSHRGSGQRG*GPAKRA
Trigger: TGCTCTCTTGGCAGGGCCCCAGCCCCTCTGACCACT...TCCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCATAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR CCA 90 bp TCCTCAGCAGAAGCTGCGTGGGCCGCCACTCCCCCTTTCTGCAATCACCCCATGGCTCAAGCTCTAGCATaGCACAGAACGCTAGGTTGG +
Preference number: 4 (lower is better)
Translates to: SSAEAAWAATPPFCNHPMAQALA*HRTLGW
Trigger: CCAACCTAGCGTTCTGTGCCATGCTAGAGCTTGAGC...CATGGGGTGATTGCAGAAAGGGGGAGTGGCGGCCCACGCAGCTTCTGCTGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR CCA 90 bp GCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTGCCTTCTGCCAACATCTaGCAATGTGAGGCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: ASTQARSLGPALEESRLLPSANI*QCEAGV
Trigger: CACCCCAGCCTCACATTGCCAGATGTTGGCAGAAGG...CAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR CCA 90 bp CCTTTATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGGATGGAGATGGGGAGCTaGTCATGGGACCCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: PLWGKWTDTSPPSCFTPWMEMGS*SWDPGA
Trigger: GGCACCTGGGTCCCATGACCAGCTCCCCATCTCCAT...CCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCATAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR CCA 90 bp CCAGAGCGAGGAGGACCTCGTGTGAATGGAGGACCTGAGAGGCTGACGCCAAGGGGGGCTAATCTTCACTaGAGAGGTAACCAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: PERGGPRVNGGPERLTPRGANLH*RGNQAF
Trigger: GAAGGCCTGGTTACCTCTCCAGTGAAGATTAGCCCC...CCTTGGCGTCAGCCTCTCAGGTCCTCCATTCACACGAGGTCCTCCTCGCTCTGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000426130.6
CDS-3UTR CCA 90 bp TCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTGCTGTCACAAATCTCCACTaGCTCAGATGCACCCAGTTC +
Preference number: 4 (lower is better)
Translates to: SEGSTGCTTRSSWEPLPAVTNLH*LRCTQF
Trigger: GAACTGGGTGCATCTGAGCCAGTGGAGATTTGTGAC...AGCAGGAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539890.1
CDS-3UTR TCA 90 bp GAAGGATGTAGAGCACCAGCAGCCCAAAGGCCACCACCAGCATCCCGGTGCTGTGTCCAGACACCATTCTaGTCACGCACTCCTTTAGCC +
Preference number: 4 (lower is better)
Translates to: EGCRAPAAQRPPPASRCCVQTPF*SRTPLA
Trigger: GGCTAAAGGAGTGCGTGATCAGAATGGTGTCTGGAC...ACAGCACCGGGATGCTGGTGGTGGCCTTTGGGCTGCTGGTGCTCTACATCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540755.5
ENST00000546151.5
CDS-3UTR TCA 90 bp TCAGCAGAAGCTGCGTGGGCCGCCACTCCCCCTTTCTGCAATCACCCCATGATGGCACTGGGTGCCAGTTaGACATGTAGATGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: SAEAAWAATPPFCNHPMMALGAS*TCRCCH
Trigger: ATGGCAGCATCTACATGTTCAACTGGCACCCAGTGC...CATCATGGGGTGATTGCAGAAAGGGGGAGTGGCGGCCCACGCAGCTTCTGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000546151.5
CDS-3UTR TCA 90 bp GAGGGCAGGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCACTGGGTGCCAGTTaGACATGTAGATGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: EGRPAPRQEVWAQHWKKVALGAS*TCRCCH
Trigger: ATGGCAGCATCTACATGTTCAACTGGCACCCAGTGC...GACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCCTGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR TCA 90 bp TGGAGATGGGGAGCTGGTCATGGGACCCAGGTGCCTGGAGGACATCCCAGTGGCGTCCTTCCATGGTTGTaGAACGTAAAGACAGCAACC +
Preference number: 4 (lower is better)
Translates to: WRWGAGHGTQVPGGHPSGVLPWL*NVKTAT
Trigger: GGTTGCTGTCTTTACGTTTCACAACCATGGAAGGAC...GCCACTGGGATGTCCTCCAGGCACCTGGGTCCCATGACCAGCTCCCCATCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR TCA 90 bp AGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTGAAAAAGAAAGTCGCCTGCTaGAACCAGCCGGGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: STQARSLGPALEESRLLKKKVAC*NQPGAL
Trigger: CAGGGCTCCCGGCTGGTTTCAGCAGGCGACTTTCTT...TTTCAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR TCA 90 bp GCACACCTTTATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACGAGGACCTGAGAGGCTaGCGCCAAGGAGTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: AHLYGGSGRTPHLPHVSHEDLRG*RQGVQK
Trigger: CTTCTGCACTCCTTGGCGTCAGCCTCTCAGGTCCTC...GTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCATAAAGGTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR TCA 90 bp CCTTTATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGGACCGTGGACTGCACTTaGGTCCCAGCTCTTCACCAC +
Preference number: 4 (lower is better)
Translates to: PLWGKWTDTSPPSCFTPWTVDCT*VPALHH
Trigger: GTGGTGAAGAGCTGGGACTCAAGTGCAGTCCACGGT...CCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCATAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR TCA 90 bp ATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGGACTGCGCGGGGCAGCCTAACTaGAATGCACACCTTTATGGG +
Preference number: 4 (lower is better)
Translates to: MGEVDGHLTSLMFHTVDCAGQPN*NAHLYG
Trigger: CCCATAAAGGTGTGCATTTCAGTTAGGCTGCCCCGC...GCAGTCCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR TCA 90 bp CTTTATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGGAAAGCCCCAAAGTCCCTaGGCCTGGTACACACCCCGT +
Preference number: 4 (lower is better)
Translates to: LYGGSGRTPHLPHVSHRGKPQSP*AWYTPR
Trigger: ACGGGGTGTGTACCAGGCTCAGGGACTTTGGGGCTT...TCCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCATAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR GCA 90 bp AGAGCTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTGAGGTTCCTAGGAGATaGAGAAGACACTGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: RASEGSTGCTTRSSWEPLEVPRR*RRHCPE
Trigger: TTCAGGGCAGTGTCTTCTGCATCTCCTAGGAACCTC...AAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR GCA 90 bp TCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTGAAACCAGCCGGGAGCCCTGGGAGGTTCCTAGGAGATaGAGAAGACACTGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: SGPSIGRKSPAETSREPWEVPRR*RRHCPE
Trigger: TTCAGGGCAGTGTCTTCTGCATCTCCTAGGAACCTC...CCAGGGCTCCCGGCTGGTTTCAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR GCA 90 bp CTGATGCTGCCAGAGAGTAGGTGGGCTCCAAACCCCAGGCTTCTCACTTGCTTACCACCAGCATCCCGGTaGTGTTGGCAAAGACCGCCT +
Preference number: 4 (lower is better)
Translates to: LMLPESRWAPNPRLLTCLPPASR*CWQRPP
Trigger: AGGCGGTCTTTGCCAACAGCACCGGGATGCTGGTGG...TAAGCAAGTGAGAAGCCTGGGGTTTGGAGCCCACCTACTCTCTGGCAGCATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR GCA 90 bp GTCAAGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGGAGCAAGGCCAGACCTaGCCAGCGGGAGGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: VKTVNISPSANIWQCEAGEQGQT*PAGGRK
Trigger: CTTCCTGCCTCCCGCTGGGCAGGTCTGGCCTTGCTC...CCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR GCA 90 bp TCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTGAAACCAGCCGGGAGCCCTGGCCCAGGCTTCTCACTTaGTTACTAAGCACAGCAGTC +
Preference number: 4 (lower is better)
Translates to: SGPSIGRKSPAETSREPWPRLLT*LLSTAV
Trigger: GACTGCTGTGCTTAGTAAGCAAGTGAGAAGCCTGGG...CCAGGGCTCCCGGCTGGTTTCAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR GCA 90 bp TCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTGCTAGTTGGGGACCCCACTaGACTCACAAACTGAAGAAA +
Preference number: 4 (lower is better)
Translates to: SEGSTGCTTRSSWEPLPASWGPH*THKLKK
Trigger: TTTCTTCAGTTTGTGAGTGCAGTGGGGTCCCCAACT...AGCAGGAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR CCA 90 bp TCTCACTTGCTTACTAAGCACAGCAGTCTGAAGCTTGGGACCTGGCAGTGCGTCGTTTCCAGGGCAGTTTaGGCCCCACCCACGACTGGG +
Preference number: 4 (lower is better)
Translates to: SHLLTKHSSLKLGTWQCVVSRAV*APPTTG
Trigger: CCCAGTCGTGGGTGGGGCCCAAACTGCCCTGGAAAC...GACGCACTGCCAGGTCCCAAGCTTCAGACTGCTGTGCTTAGTAAGCAAGTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR CCA 90 bp GGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGGACTGCACTAAGCCCAGGAACCACTaGCAGGCGAAGAGGAAGACA +
Preference number: 4 (lower is better)
Translates to: GEVDGHLTSLMFHTVDCTKPRNH*QAKRKT
Trigger: TGTCTTCCTCTTCGCCTGCCAGTGGTTCCTGGGCTT...AGTGCAGTCCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000546151.5
CDS-3UTR CCA 90 bp AGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTGAAACAAAGACCGCCTCACTaGGCAGGCTGTGGTATGGCC +
Preference number: 4 (lower is better)
Translates to: STQARSLGPALEESRLLKQRPPH*AGCGMA
Trigger: GGCCATACCACAGCCTGCCCAGTGAGGCGGTCTTTG...TTTCAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CCA 90 bp ACCTTTATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGCAAAGACCGCCTCACTaGGCAGGCTGTGGTATGGCC +
Preference number: 4 (lower is better)
Translates to: TFMGEVDGHLTSLMFHTVQRPPH*AGCGMA
Trigger: GGCCATACCACAGCCTGCCCAGTGAGGCGGTCTTTG...CACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCATAAAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CCA 90 bp CTTTATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGGAGCATCCCGGTGCTGTTaGCAAAGACCGCCTCACTGG +
Preference number: 4 (lower is better)
Translates to: LYGGSGRTPHLPHVSHRGASRCC*QRPPHW
Trigger: CCAGTGAGGCGGTCTTTGCCAACAGCACCGGGATGC...TCCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCATAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CCA 90 bp GGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTCCCAGGCAAGAAGTCTaGGCCCAGCATTGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: GQHPGKKSGPSIGRKSPAPRQEV*AQHWKK
Trigger: TTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGG...AGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CCA 90 bp TCCTCAGCAGAAGCTGCGTGGGCCGCCACTCCCCCTTTCTGCAATCACCCCATGTCATGTTTCACACCGTaGACTGCACTTGAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: SSAEAAWAATPPFCNHPMSCFTP*TALESQ
Trigger: CTGGGACTCAAGTGCAGTCCACGGTGTGAAACATGA...CATGGGGTGATTGCAGAAAGGGGGAGTGGCGGCCCACGCAGCTTCTGCTGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000546151.5
CDS-3UTR CCA 90 bp TCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTGAAACCAGCCGGGAGCCCTGGTCATGTTTCACACCGTaGACTGCACTTGAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: SGPSIGRKSPAETSREPWSCFTP*TALESQ
Trigger: CTGGGACTCAAGTGCAGTCCACGGTGTGAAACATGA...CCAGGGCTCCCGGCTGGTTTCAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CCA 90 bp AGAGCTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTTCATGTTTCACACCGTaGACTGCACTTGAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: RASEGSTGCTTRSSWEPLSCFTP*TALESQ
Trigger: CTGGGACTCAAGTGCAGTCCACGGTGTGAAACATGA...AAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CCA 90 bp CAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTGAACTACCCCTATGGAGATaGGGAGCTGGTCATGGGACC +
Preference number: 4 (lower is better)
Translates to: QHPGKKSGPSIGRKSPAELPLWR*GAGHGT
Trigger: GGTCCCATGACCAGCTCCCCATCTCCATAGGGGTAG...TTCAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR CCA 90 bp CTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTGATGCTATCTCTTGGCTaGGGGGATAAAAGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: LLRGAQAAPPGALGSPFLMLSLG*GDKRRE
Trigger: CTCTCTCCTTTTATCCCCCCAGCCAAGAGATAGCAT...CAGGAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR CCA 90 bp GGATGTAGAGCACCAGCAGCCCAAAGGCCACCACCAGCATCCCGGTGCTGTTGGCACCCTCAAGTTACTTaGTTTCCTGCTGTGCCACAG +
Preference number: 4 (lower is better)
Translates to: GCRAPAAQRPPPASRCCWHPQVT*FPAVPQ
Trigger: CTGTGGCACAGCAGGAAACCAAGTAACTTGAGGGTG...CCAACAGCACCGGGATGCTGGTGGTGGCCTTTGGGCTGCTGGTGCTCTACATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR TCA 90 bp TCTCACTTGCTTACTAAGCACAGCAGTCTGAAGCTTGGGACCTGGCAGTGCGTCCAGAAGACACTGCCCTaGATGCCTACAGCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: SHLLTKHSSLKLGTWQCVQKTLP*MPTAGW
Trigger: CCAGCCGGCTGTAGGCATTCAGGGCAGTGTCTTCTG...GACGCACTGCCAGGTCCCAAGCTTCAGACTGCTGTGCTTAGTAAGCAAGTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR TCA 90 bp AGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGGTGGCCAGCCCCACAACAGTaGGGACGAAGGCCATCAGGT +
Preference number: 4 (lower is better)
Translates to: RRSILALLPTSGNVRLGWPAPQQ*GRRPSG
Trigger: ACCTGATGGCCTTCGTCCTCACTGTTGTGGGGCTGG...CCACCCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR TCA 90 bp CATAAACCAGTGAAATGCCTACCCCTATGGAGATGGGGAGCTGGTCATGGGACCGAGGAGGACCTCGTGTaGATGGAGGACCTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: HKPVKCLPLWRWGAGHGTEEDLV*MEDLRG
Trigger: GCCTCTCAGGTCCTCCATTCACACGAGGTCCTCCTC...GGTCCCATGACCAGCTCCCCATCTCCATAGGGGTAGGCATTTCACTGGTTTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR TCA 90 bp CCGTGGACTGCACTTGAGTCCCAGCTCTTCACCACATCCCTAGGAGTCTTAAGAGAGGAGGACCTCGTGTaGATGGAGGACCTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: PWTALESQLFTTSLGVLREEDLV*MEDLRG
Trigger: GCCTCTCAGGTCCTCCATTCACACGAGGTCCTCCTC...TCTTAAGACTCCTAGGGATGTGGTGAAGAGCTGGGACTCAAGTGCAGTCCACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR TCA 90 bp GCACACCTTTATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACACCGTGGACTGCACTTaGGTCCCAGCTCTTCACCAC +
Preference number: 4 (lower is better)
Translates to: AHLYGGSGRTPHLPHVSHTVDCT*VPALHH
Trigger: GTGGTGAAGAGCTGGGACTCAAGTGCAGTCCACGGT...GTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCATAAAGGTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR TCA 90 bp TCTGTCTCCCAATGGACAGACTGGGGAGTCCCAGCATTTCACTGGGATGCGCTGGCGGGGCAGCCTAACTaGAATGCACACCTTTATGGG +
Preference number: 4 (lower is better)
Translates to: SVSQWTDWGVPAFHWDALAGQPN*NAHLYG
Trigger: CCCATAAAGGTGTGCATTTCAGTTAGGCTGCCCCGC...CAGCGCATCCCAGTGAAATGCTGGGACTCCCCAGTCTGTCCATTGGGAGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR TCA 90 bp AGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGGTGGAGGGCTGCCTGCCGGTaGCAGACACGTAAGTCACAG +
Preference number: 4 (lower is better)
Translates to: RRSILALLPTSGNVRLGWRAACR*QTRKSQ
Trigger: CTGTGACTTACGTGTCTGTCACCGGCAGGCAGCCCT...CCACCCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR TCA 90 bp TCTCACTTGCTTACTAAGCACAGCAGTCTGAAGCTTGGGACCTGGCAGTGCGTCAGGGCTGCCTGCCGGTaGCAGACACGTAAGTCACAG +
Preference number: 4 (lower is better)
Translates to: SHLLTKHSSLKLGTWQCVRAACR*QTRKSQ
Trigger: CTGTGACTTACGTGTCTGTCACCGGCAGGCAGCCCT...GACGCACTGCCAGGTCCCAAGCTTCAGACTGCTGTGCTTAGTAAGCAAGTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR TCA 90 bp CTTTATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGGACAACATCTGGCAATGTaGGGCTGGGGTGGACGTTGG +
Preference number: 4 (lower is better)
Translates to: LYGGSGRTPHLPHVSHRGQHLAM*GWGGRW
Trigger: CCAACGTCCACCCCAGCCTCACATTGCCAGATGTTG...TCCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCATAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR GCA 90 bp GGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTGAGGTTCCTAGGAGATaGAGAAGACACTGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: GQHPGKKSGPSIGRKSPAEVPRR*RRHCPE
Trigger: TTCAGGGCAGTGTCTTCTGCATCTCCTAGGAACCTC...AGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR GCA 90 bp CTGATGCTGCCAGAGAGTAGGTGGGCTCCAAACCCCAGGCTTCTCACTTGCTTACATCAGGTGCAGCGCTaGATGGAGGAGTTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LMLPESRWAPNPRLLTCLHQVQR*MEEFPG
Trigger: CCCTGGAAACTCCTCCATGCAGCGCTGCACCTGATG...TAAGCAAGTGAGAAGCCTGGGGTTTGGAGCCCACCTACTCTCTGGCAGCATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR GCA 90 bp CAGCCAGTCAAGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGAGCAAGGCCAGACCTaGCCAGCGGGAGGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: QPVKTVNISPSANIWQCEEQGQT*PAGGRK
Trigger: CTTCCTGCCTCCCGCTGGGCAGGTCTGGCCTTGCTC...CTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTTGACTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR GCA 90 bp CATAAACCAGTGAAATGCCTACCCCTATGGAGATGGGGAGCTGGTCATGGGACCAGTGGCTCCCAGGGCTaGTGCACACTGGACACCACA +
Preference number: 4 (lower is better)
Translates to: HKPVKCLPLWRWGAGHGTSGSQG*CTLDTT
Trigger: TGTGGTGTCCAGTGTGCAGCAGCCCTGGGAGCCACT...GGTCCCATGACCAGCTCCCCATCTCCATAGGGGTAGGCATTTCACTGGTTTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR CCA 90 bp ATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGGACTGCCTCAGAGAACTGGCCTaGGCTCCAATTCCTGCGAAA +
Preference number: 4 (lower is better)
Translates to: MGEVDGHLTSLMFHTVDCLRELA*APIPAK
Trigger: TTTCGCAGGAATTGGAGCCCAGGCCAGTTCTCTGAG...GCAGTCCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CCA 90 bp ACTGCACTTGAGTCCCAGCTCTTCACCACATCCCTAGGAGTCTTAAGAGGAAATGGCCCCACCCACGACTaGGGCAGGCGGTACACCAGT +
Preference number: 4 (lower is better)
Translates to: TALESQLFTTSLGVLRGNGPTHD*GRRYTS
Trigger: ACTGGTGTACCGCCTGCCCCAGTCGTGGGTGGGGCC...ATTTCCTCTTAAGACTCCTAGGGATGTGGTGAAGAGCTGGGACTCAAGTGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR CCA 90 bp CTTCATAAACCAGTGAAATGCCTACCCCTATGGAGATGGGGAGCTGGTCATGGGGTTTCCAGGGCAGTTTaGGCCCCACCCACGACTGGG +
Preference number: 4 (lower is better)
Translates to: LHKPVKCLPLWRWGAGHGVSRAV*APPTTG
Trigger: CCCAGTCGTGGGTGGGGCCCAAACTGCCCTGGAAAC...CCCATGACCAGCTCCCCATCTCCATAGGGGTAGGCATTTCACTGGTTTATGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR CCA 90 bp CTTTATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGGAAGGTGCAGCGCTGCATaGAGGAGTTTCCAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: LYGGSGRTPHLPHVSHRGRCSAA*RSFQGS
Trigger: ACTGCCCTGGAAACTCCTCCATGCAGCGCTGCACCT...TCCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCATAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR CCA 90 bp TCTGTCTCCCAATGGACAGACTGGGGAGTCCCAGCATTTCACTGGGATGCGCTGTCACTGGGCAGGCTGTaGTATGGCCTGGTGGTGTTT +
Preference number: 4 (lower is better)
Translates to: SVSQWTDWGVPAFHWDALSLGRL*YGLVVF
Trigger: AAACACCACCAGGCCATACCACAGCCTGCCCAGTGA...CAGCGCATCCCAGTGAAATGCTGGGACTCCCCAGTCTGTCCATTGGGAGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR CCA 90 bp CATAAACCAGTGAAATGCCTACCCCTATGGAGATGGGGAGCTGGTCATGGGACCGCATCCCGGTGCTGTTaGCAAAGACCGCCTCACTGG +
Preference number: 4 (lower is better)
Translates to: HKPVKCLPLWRWGAGHGTASRCC*QRPPHW
Trigger: CCAGTGAGGCGGTCTTTGCCAACAGCACCGGGATGC...GGTCCCATGACCAGCTCCCCATCTCCATAGGGGTAGGCATTTCACTGGTTTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR CCA 90 bp ATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGGACTGCCCCAGGCAAGAAGTCTaGGCCCAGCATTGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: MGEVDGHLTSLMFHTVDCPRQEV*AQHWKK
Trigger: TTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGG...GCAGTCCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CCA 90 bp GCACACCTTTATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCCTTTATGGGGGAAGTaGACGGACACCTCACCTCCC +
Preference number: 4 (lower is better)
Translates to: AHLYGGSGRTPHLPHVSHPLWGK*TDTSPP
Trigger: GGGAGGTGAGGTGTCCGTCCACTTCCCCCATAAAGG...GTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCATAAAGGTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CCA 90 bp CTGATGCTGCCAGAGAGTAGGTGGGCTCCAAACCCCAGGCTTCTCACTTGCTTACCTTTATGGGGGAAGTaGACGGACACCTCACCTCCC +
Preference number: 4 (lower is better)
Translates to: LMLPESRWAPNPRLLTCLPLWGK*TDTSPP
Trigger: GGGAGGTGAGGTGTCCGTCCACTTCCCCCATAAAGG...TAAGCAAGTGAGAAGCCTGGGGTTTGGAGCCCACCTACTCTCTGGCAGCATCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR CCA 90 bp AGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTGAAACCTTTATGGGGGAAGTaGACGGACACCTCACCTCCC +
Preference number: 4 (lower is better)
Translates to: STQARSLGPALEESRLLKPLWGK*TDTSPP
Trigger: GGGAGGTGAGGTGTCCGTCCACTTCCCCCATAAAGG...TTTCAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CCA 90 bp TCAAGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGGTCAGCAGAAGCTGCGTaGGCCGCCACTCCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: SRRSILALLPTSGNVRLGSAEAA*AATPPF
Trigger: GAAAGGGGGAGTGGCGGCCCACGCAGCTTCTGCTGA...CCCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR CCA 90 bp GTCAAGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGAGTGGTCAGAGGGGCTaGGGCCCTGCCAAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: VKTVNISPSANIWQCEAGSGQRG*GPAKRA
Trigger: TGCTCTCTTGGCAGGGCCCCAGCCCCTCTGACCACT...CCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR CCA 90 bp AGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGGTGGCCAGGCAAGCAGCCATaGTGGGGCCAGGTGAAGCAA +
Preference number: 4 (lower is better)
Translates to: RRSILALLPTSGNVRLGWPGKQP*WGQVKQ
Trigger: TTGCTTCACCTGGCCCCACCATGGCTGCTTGCCTGG...CCACCCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR CCA 90 bp CTGATGCTGCCAGAGAGTAGGTGGGCTCCAAACCCCAGGCTTCTCACTTGCTTACACAGAACGCTAGGTTaGGCCAGGCAAGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: LMLPESRWAPNPRLLTCLHRTLG*ARQAAM
Trigger: CATGGCTGCTTGCCTGGCCCAACCTAGCGTTCTGTG...TAAGCAAGTGAGAAGCCTGGGGTTTGGAGCCCACCTACTCTCTGGCAGCATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR CCA 90 bp TCTCACTTGCTTACTAAGCACAGCAGTCTGAAGCTTGGGACCTGGCAGTGCGTCGGCTGGGGTGGACGTTaGCCTGATGTTGCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: SHLLTKHSSLKLGTWQCVGWGGR*PDVARS
Trigger: ACTCCTGGCAACATCAGGCCAACGTCCACCCCAGCC...GACGCACTGCCAGGTCCCAAGCTTCAGACTGCTGTGCTTAGTAAGCAAGTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR CCA 90 bp TCTCACTTGCTTACTAAGCACAGCAGTCTGAAGCTTGGGACCTGGCAGTGCGTCATGGAGATGGGGAGCTaGTCATGGGACCCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: SHLLTKHSSLKLGTWQCVMEMGS*SWDPGA
Trigger: GGCACCTGGGTCCCATGACCAGCTCCCCATCTCCAT...GACGCACTGCCAGGTCCCAAGCTTCAGACTGCTGTGCTTAGTAAGCAAGTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR CCA 90 bp ATGCAAGGCTCTAGAGTCAGACTGCCTAATCTGAGTCCCAGCTCTGCCACTTACATGCCTACAGCCGGCTaGCAATGCCGCCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: MQGSRVRLPNLSPSSATYMPTAG*QCRPRA
Trigger: TGCTCTGGGGCGGCATTGCCAGCCGGCTGTAGGCAT...GTAAGTGGCAGAGCTGGGACTCAGATTAGGCAGTCTGACTCTAGAGCCTTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR CCA 90 bp CCTTTATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGGTCACTGGGCAGGCTGTaGTATGGCCACCTCCATAGA +
Preference number: 4 (lower is better)
Translates to: PLWGKWTDTSPPSCFTPWSLGRL*YGHLHR
Trigger: TCTATGGAGGTGGCCATACCACAGCCTGCCCAGTGA...CCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCATAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544118.5
CDS-3UTR CCA 90 bp GAAGGATGTAGAGCACCAGCAGCCCAAAGGCCACCACCAGCATCCCGGTGCTGTAATTCTGTCTCCCAATaGACAGACTGGGGAGTCCCA +
Preference number: 4 (lower is better)
Translates to: EGCRAPAAQRPPPASRCCNSVSQ*TDWGVP
Trigger: TGGGACTCCCCAGTCTGTCCATTGGGAGACAGAATT...ACAGCACCGGGATGCTGGTGGTGGCCTTTGGGCTGCTGGTGCTCTACATCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR TCA 90 bp GTCAAGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGCAGAAGACACTGCCCTaGATGCCTACAGCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: VKTVNISPSANIWQCEAGQKTLP*MPTAGW
Trigger: CCAGCCGGCTGTAGGCATTCAGGGCAGTGTCTTCTG...CCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR TCA 90 bp AGGCTGGTAAAGGAGAAATCACACACCCTTGTCACAGTCAAGCCCTTCCTTGGGCAGAAGACACTGCCCTaGATGCCTACAGCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: RLVKEKSHTLVTVKPFLGQKTLP*MPTAGW
Trigger: CCAGCCGGCTGTAGGCATTCAGGGCAGTGTCTTCTG...CCCAAGGAAGGGCTTGACTGTGACAAGGGTGTGTGATTTCTCCTTTACCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR TCA 90 bp CTGAAACCAGCCGGGAGCCCTGGGAAGAGCAGAGCTTCTGAGGGGAGCACAGGCGCGAAATGGGCACCTTaGGCAAATCACTTAACATTT +
Preference number: 4 (lower is better)
Translates to: LKPAGSPGKSRASEGSTGAKWAP*ANHLTF
Trigger: AAATGTTAAGTGATTTGCTCAAGGTGCCCATTTCGC...GCCTGTGCTCCCCTCAGAAGCTCTGCTCTTCCCAGGGCTCCCGGCTGGTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR TCA 90 bp CAGGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGGTCCTTCCATGGTTGTaGAACGTAAAGACAGCAACC +
Preference number: 4 (lower is better)
Translates to: QASTQARSLGPALEESRLVLPWL*NVKTAT
Trigger: GGTTGCTGTCTTTACGTTTCACAACCATGGAAGGAC...CAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
CDS-3UTR TCA 90 bp CTTCATAAACCAGTGAAATGCCTACCCCTATGGAGATGGGGAGCTGGTCATGGGGAGGAGGACCTCGTGTaGATGGAGGACCTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: LHKPVKCLPLWRWGAGHGEEDLV*MEDLRG
Trigger: GCCTCTCAGGTCCTCCATTCACACGAGGTCCTCCTC...CCCATGACCAGCTCCCCATCTCCATAGGGGTAGGCATTTCACTGGTTTATGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR TCA 90 bp CTGATGCTGCCAGAGAGTAGGTGGGCTCCAAACCCCAGGCTTCTCACTTGCTTAGCGGGGCAGCCTAACTaGAATGCACACCTTTATGGG +
Preference number: 4 (lower is better)
Translates to: LMLPESRWAPNPRLLTCLAGQPN*NAHLYG
Trigger: CCCATAAAGGTGTGCATTTCAGTTAGGCTGCCCCGC...TAAGCAAGTGAGAAGCCTGGGGTTTGGAGCCCACCTACTCTCTGGCAGCATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR TCA 90 bp CATAAACCAGTGAAATGCCTACCCCTATGGAGATGGGGAGCTGGTCATGGGACCCAACATCTGGCAATGTaGGGCTGGGGTGGACGTTGG +
Preference number: 4 (lower is better)
Translates to: HKPVKCLPLWRWGAGHGTQHLAM*GWGGRW
Trigger: CCAACGTCCACCCCAGCCTCACATTGCCAGATGTTG...GGTCCCATGACCAGCTCCCCATCTCCATAGGGGTAGGCATTTCACTGGTTTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR TCA 90 bp GGCAGGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTCCCGGGTCCATATGTaGTCTAGAATTTTAACACCC +
Preference number: 4 (lower is better)
Translates to: GRPAPRQEVWAQHWKKVASRVHM*SRILTP
Trigger: GGGTGTTAAAATTCTAGATCACATATGGACCCGGGA...GGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR TCA 90 bp CCTCGTGTGAATGGAGGACCTGAGAGGCTGACGCCAAGGAGTGCAGAAGCCAAATCAGACTGCCTAATCTaGGTCCCAGCTCTGCCACTT +
Preference number: 4 (lower is better)
Translates to: PRVNGGPERLTPRSAEAKSDCLI*VPALPL
Trigger: AAGTGGCAGAGCTGGGACTCAGATTAGGCAGTCTGA...TTTGGCTTCTGCACTCCTTGGCGTCAGCCTCTCAGGTCCTCCATTCACACGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR TCA 90 bp CCGTGGACTGCACTTGAGTCCCAGCTCTTCACCACATCCCTAGGAGTCTTAAGATGGGAGGCCAAGGCATaGGGATTGCTTTACCCCAGG +
Preference number: 4 (lower is better)
Translates to: PWTALESQLFTTSLGVLRWEAKA*GLLYPR
Trigger: CCTGGGGTAAAGCAATCCTCATGCCTTGGCCTCCCA...TCTTAAGACTCCTAGGGATGTGGTGAAGAGCTGGGACTCAAGTGCAGTCCACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR TCA 90 bp GGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGGACTGCACTCAGGAGTTAATGACATaGTGCAGGAGTCACACCAGG +
Preference number: 4 (lower is better)
Translates to: GEVDGHLTSLMFHTVDCTQELMT*CRSHTR
Trigger: CCTGGTGTGACTCCTGCATCATGTCATTAACTCCTG...AGTGCAGTCCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR GCA 90 bp GCACACCTTTATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACAGACACTGCCCTGAATaGCTACAGCCGGCTGGCAAT +
Preference number: 4 (lower is better)
Translates to: AHLYGGSGRTPHLPHVSHRHCPE*LQPAGN
Trigger: ATTGCCAGCCGGCTGTAGGCATTCAGGGCAGTGTCT...GTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCATAAAGGTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000546151.5
CDS-3UTR GCA 90 bp CTGATGCTGCCAGAGAGTAGGTGGGCTCCAAACCCCAGGCTTCTCACTTGCTTAAGACACTGCCCTGAATaGCTACAGCCGGCTGGCAAT +
Preference number: 4 (lower is better)
Translates to: LMLPESRWAPNPRLLTCLRHCPE*LQPAGN
Trigger: ATTGCCAGCCGGCTGTAGGCATTCAGGGCAGTGTCT...TAAGCAAGTGAGAAGCCTGGGGTTTGGAGCCCACCTACTCTCTGGCAGCATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR GCA 90 bp AGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTGAAAAGACACTGCCCTGAATaGCTACAGCCGGCTGGCAAT +
Preference number: 4 (lower is better)
Translates to: STQARSLGPALEESRLLKRHCPE*LQPAGN
Trigger: ATTGCCAGCCGGCTGTAGGCATTCAGGGCAGTGTCT...TTTCAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000546151.5
CDS-3UTR GCA 90 bp TCTCACTTGCTTACTAAGCACAGCAGTCTGAAGCTTGGGACCTGGCAGTGCGTCCATCAGGTGCAGCGCTaGATGGAGGAGTTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SHLLTKHSSLKLGTWQCVHQVQR*MEEFPG
Trigger: CCCTGGAAACTCCTCCATGCAGCGCTGCACCTGATG...GACGCACTGCCAGGTCCCAAGCTTCAGACTGCTGTGCTTAGTAAGCAAGTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR GCA 90 bp CAGCCAGTCAAGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGAGGGGAGCACAGGCTaGACCACCAGGAGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: QPVKTVNISPSANIWQCEEGSTG*TTRSSW
Trigger: CCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTC...CTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTTGACTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR GCA 90 bp GTCAAGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGAGTGGCTCCCAGGGCTaGTGCACACTGGACACCACA +
Preference number: 4 (lower is better)
Translates to: VKTVNISPSANIWQCEAGSGSQG*CTLDTT
Trigger: TGTGGTGTCCAGTGTGCAGCAGCCCTGGGAGCCACT...CCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR GCA 90 bp GTAGGGCTGCCTGCCGGTGACAGACACGTAAGTCACAGGGAAAGGCCGGGATCCCATAAACCAGTGAAATaGCTACCCCTATGGAGATGG +
Preference number: 4 (lower is better)
Translates to: VGLPAGDRHVSHRERPGSHKPVK*LPLWRW
Trigger: CCATCTCCATAGGGGTAGGCATTTCACTGGTTTATG...GGATCCCGGCCTTTCCCTGTGACTTACGTGTCTGTCACCGGCAGGCAGCCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR GCA 90 bp CAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTGAACAGAGGCAGGAGAATTaGTTGAACCCAGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: QHPGKKSGPSIGRKSPAEQRQEN*LNPAGG
Trigger: TCCACCTGCTGGGTTCAAGCAATTCTCCTGCCTCTG...TTCAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR GCA 90 bp TGGACTGCACTTGAGTCCCAGCTCTTCACCACATCCCTAGGAGTCTTAAGAGGAGGGACTGCAGGTGCCTaGCACCACGCCTGGCTAATT +
Preference number: 4 (lower is better)
Translates to: WTALESQLFTTSLGVLRGGTAGA*HHAWLI
Trigger: AATTAGCCAGGCGTGGTGGCAGGCACCTGCAGTCCC...TCCTCTTAAGACTCCTAGGGATGTGGTGAAGAGCTGGGACTCAAGTGCAGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR CCA 90 bp CTGATGCTGCCAGAGAGTAGGTGGGCTCCAAACCCCAGGCTTCTCACTTGCTTAAAGCCCAGGAACCACTaGCAGGCGAAGAGGAAGACA +
Preference number: 4 (lower is better)
Translates to: LMLPESRWAPNPRLLTCLKPRNH*QAKRKT
Trigger: TGTCTTCCTCTTCGCCTGCCAGTGGTTCCTGGGCTT...TAAGCAAGTGAGAAGCCTGGGGTTTGGAGCCCACCTACTCTCTGGCAGCATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR CCA 90 bp GTCAAGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGCAAAGACCGCCTCACTaGGCAGGCTGTGGTATGGCC +
Preference number: 4 (lower is better)
Translates to: VKTVNISPSANIWQCEAGQRPPH*AGCGMA
Trigger: GGCCATACCACAGCCTGCCCAGTGAGGCGGTCTTTG...CCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR CCA 90 bp CCGTGGACTGCACTTGAGTCCCAGCTCTTCACCACATCCCTAGGAGTCTTAAGACCTTTATGGGGGAAGTaGACGGACACCTCACCTCCC +
Preference number: 4 (lower is better)
Translates to: PWTALESQLFTTSLGVLRPLWGK*TDTSPP
Trigger: GGGAGGTGAGGTGTCCGTCCACTTCCCCCATAAAGG...TCTTAAGACTCCTAGGGATGTGGTGAAGAGCTGGGACTCAAGTGCAGTCCACGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CCA 90 bp CCTCGTGTGAATGGAGGACCTGAGAGGCTGACGCCAAGGAGTGCAGAAGCCAAACTGAAGCTTGGGACCTaGCAGTGCGTCTTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: PRVNGGPERLTPRSAEAKLKLGT*QCVFGE
Trigger: TTCTCCAAAGACGCACTGCCAGGTCCCAAGCTTCAG...TTTGGCTTCTGCACTCCTTGGCGTCAGCCTCTCAGGTCCTCCATTCACACGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR CCA 90 bp CAGCCAGTCAAGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGATGCCTACAGCCGGCTaGCAATGCCGCCCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: QPVKTVNISPSANIWQCEMPTAG*QCRPRA
Trigger: TGCTCTGGGGCGGCATTGCCAGCCGGCTGTAGGCAT...CTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTTGACTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426130.6
ENST00000447532.6
CDS-3UTR CCA 90 bp ATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGGACTGCCTTCCAGATCAGGAGTaGACCCAACCCCAAAATCTC +
Preference number: 4 (lower is better)
Translates to: MGEVDGHLTSLMFHTVDCLPDQE*TQPQNL
Trigger: GAGATTTTGGGGTTGGGTCCACTCCTGATCTGGAAG...GCAGTCCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR CCA 90 bp CCGTGGACTGCACTTGAGTCCCAGCTCTTCACCACATCCCTAGGAGTCTTAAGATTCACTGGGATGCGCTaGTTTGGGACCAGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: PWTALESQLFTTSLGVLRFTGMR*FGTSAP
Trigger: GGGAGCACTGGTCCCAAACCAGCGCATCCCAGTGAA...TCTTAAGACTCCTAGGGATGTGGTGAAGAGCTGGGACTCAAGTGCAGTCCACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR TCA 90 bp TTAAGAGGAAATCAGTCTGATTTCTTCAGACAGGAGCAGCAAGAGCGGCCAGAGCACAGTGGGACGAAGTaGGGCCGGGATCTCCGGAAC +
Preference number: 4 (lower is better)
Translates to: LRGNQSDFFRQEQQERPEHSGTK*GRDLRN
Trigger: GTTCCGGAGATCCCGGCCTCACTTCGTCCCACTGTG...CTCTGGCCGCTCTTGCTGCTCCTGTCTGAAGAAATCAGACTGATTTCCTCTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR TCA 90 bp CTTTATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGGAGTCCAGACACCATTCTaGTCACGCACTCCTTTAGCC +
Preference number: 4 (lower is better)
Translates to: LYGGSGRTPHLPHVSHRGVQTPF*SRTPLA
Trigger: GGCTAAAGGAGTGCGTGATCAGAATGGTGTCTGGAC...TCCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCATAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294072.9
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR TCA 90 bp GGCAGGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCAAGAGGAAATCAGTCTaGTTTCTTCAGACAGGAGCA +
Preference number: 4 (lower is better)
Translates to: GRPAPRQEVWAQHWKKVAKRKSV*FLQTGA
Trigger: TGCTCCTGTCTGAAGAAATCAGACTGATTTCCTCTT...GGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR TCA 90 bp TCCTCAGCAGAAGCTGCGTGGGCCGCCACTCCCCCTTTCTGCAATCACCCCATGAAGAGGAAATCAGTCTaGTTTCTTCAGACAGGAGCA +
Preference number: 4 (lower is better)
Translates to: SSAEAAWAATPPFCNHPMKRKSV*FLQTGA
Trigger: TGCTCCTGTCTGAAGAAATCAGACTGATTTCCTCTT...CATGGGGTGATTGCAGAAAGGGGGAGTGGCGGCCCACGCAGCTTCTGCTGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000546151.5
CDS-3UTR TCA 90 bp GTCAAGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGACCGTGGACTGCACTTaGGTCCCAGCTCTTCACCAC +
Preference number: 4 (lower is better)
Translates to: VKTVNISPSANIWQCEAGTVDCT*VPALHH
Trigger: GTGGTGAAGAGCTGGGACTCAAGTGCAGTCCACGGT...CCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR TCA 90 bp TCTCACTTGCTTACTAAGCACAGCAGTCTGAAGCTTGGGACCTGGCAGTGCGTCCCAGGAGTAGGATGCTaGTGCTGCCAGAGAGTAGGT +
Preference number: 4 (lower is better)
Translates to: SHLLTKHSSLKLGTWQCVPGVGC*CCQRVG
Trigger: ACCTACTCTCTGGCAGCATCAGCATCCTACTCCTGG...GACGCACTGCCAGGTCCCAAGCTTCAGACTGCTGTGCTTAGTAAGCAAGTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR TCA 90 bp AGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGGTGGACATCCCAGTGGCTTTaGAGGCTCCAGCCAGTCAAG +
Preference number: 4 (lower is better)
Translates to: RRSILALLPTSGNVRLGWTSQWL*RLQPVK
Trigger: CTTGACTGGCTGGAGCCTTCAAAGCCACTGGGATGT...CCACCCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR GCA 90 bp GTCAAGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGACGAAGGCCATCAGGTaGAGCGCTGCATGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: VKTVNISPSANIWQCEAGTKAIR*SAAWRS
Trigger: ACTCCTCCATGCAGCGCTGCACCTGATGGCCTTCGT...CCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR GCA 90 bp TGGACTGCACTTGAGTCCCAGCTCTTCACCACATCCCTAGGAGTCTTAAGAGGAGGAGCCCCTTCCTGCTaGTTCACTCCCCATCATGCA +
Preference number: 4 (lower is better)
Translates to: WTALESQLFTTSLGVLRGGAPSC*FTPHHA
Trigger: TGCATGATGGGGAGTGAAGCAGCAGGAAGGGGCTCC...TCCTCTTAAGACTCCTAGGGATGTGGTGAAGAGCTGGGACTCAAGTGCAGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR GCA 90 bp GTCAAGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGGGAGCCCCTTCCTGCTaGTTCACTCCCCATCATGCA +
Preference number: 4 (lower is better)
Translates to: VKTVNISPSANIWQCEAGGAPSC*FTPHHA
Trigger: TGCATGATGGGGAGTGAAGCAGCAGGAAGGGGCTCC...CCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR GCA 90 bp ACTGCACTTGAGTCCCAGCTCTTCACCACATCCCTAGGAGTCTTAAGAGGAAATAGGGTCCAGGACTGCTaGGATGCATCAGCCCCGCCT +
Preference number: 4 (lower is better)
Translates to: TALESQLFTTSLGVLRGNRVQDC*DASAPP
Trigger: AGGCGGGGCTGATGCATCGCAGCAGTCCTGGACCCT...ATTTCCTCTTAAGACTCCTAGGGATGTGGTGAAGAGCTGGGACTCAAGTGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426130.6
CDS-3UTR GCA 90 bp AGAAAGATCAATTCTGTTACCTTCCAGATCAGGAGTGGACCCAACCCCAAAATCACAGCCGGCTGGCAATaGCGCCCCAGAGCAGAGCGG +
Preference number: 4 (lower is better)
Translates to: RKINSVTFQIRSGPNPKITAGWQ*RPRAER
Trigger: CCGCTCTGCTCTGGGGCGGCATTGCCAGCCGGCTGT...GATTTTGGGGTTGGGTCCACTCCTGATCTGGAAGGTAACAGAATTGATCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR GCA 90 bp GGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTTTGGAGACTAGCCTGTaGAACATAGTGAGATCCTGT +
Preference number: 4 (lower is better)
Translates to: GQHPGKKSGPSIGRKSPALETSL*NIVRSC
Trigger: ACAGGATCTCACTATGTTGCACAGGCTAGTCTCCAA...AGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR GCA 90 bp TGGACTGCACTTGAGTCCCAGCTCTTCACCACATCCCTAGGAGTCTTAAGAGGACTGGTTTGGGACCAGTaGTCCCCATCAGCCACCCTA +
Preference number: 4 (lower is better)
Translates to: WTALESQLFTTSLGVLRGLVWDQ*SPSATL
Trigger: TAGGGTGGCTGATGGGGAGCACTGGTCCCAAACCAG...TCCTCTTAAGACTCCTAGGGATGTGGTGAAGAGCTGGGACTCAAGTGCAGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR CCA 90 bp GCTCTGCCACTTACTGGCTGTGTGCCCTCGGGTAAGTTACGTAACCCCTCTGTTCTCAGAGAACTGGCCTaGGCTCCAATTCCTGCGAAA +
Preference number: 4 (lower is better)
Translates to: ALPLTGCVPSGKLRNPSVLRELA*APIPAK
Trigger: TTTCGCAGGAATTGGAGCCCAGGCCAGTTCTCTGAG...AACAGAGGGGTTACGTAACTTACCCGAGGGCACACAGCCAGTAAGTGGCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR CCA 90 bp TCAAGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGGAGGTGCAGCGCTGCATaGAGGAGTTTCCAGGGCAGT +
Preference number: 4 (lower is better)
Translates to: SRRSILALLPTSGNVRLGRCSAA*RSFQGS
Trigger: ACTGCCCTGGAAACTCCTCCATGCAGCGCTGCACCT...CCCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR CCA 90 bp CTTTATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGGAGGGCAGGCTGTGGTATaGCCTGGTGGTGTTTTTCAA +
Preference number: 4 (lower is better)
Translates to: LYGGSGRTPHLPHVSHRGGQAVV*PGGVFQ
Trigger: TTGAAAAACACCACCAGGCCATACCACAGCCTGCCC...TCCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCATAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
CDS-3UTR CCA 90 bp CCTTTATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGGTCATGTTTCACACCGTaGACTGCACTTGAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: PLWGKWTDTSPPSCFTPWSCFTP*TALESQ
Trigger: CTGGGACTCAAGTGCAGTCCACGGTGTGAAACATGA...CCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCATAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CCA 90 bp ACTGCACTTGAGTCCCAGCTCTTCACCACATCCCTAGGAGTCTTAAGAGGAAATTCAGCAGAAGCTGCGTaGGCCGCCACTCCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: TALESQLFTTSLGVLRGNSAEAA*AATPPF
Trigger: GAAAGGGGGAGTGGCGGCCCACGCAGCTTCTGCTGA...ATTTCCTCTTAAGACTCCTAGGGATGTGGTGAAGAGCTGGGACTCAAGTGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000546151.5
CDS-3UTR CCA 90 bp AGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGGTGGCGCTACTGGGACATCTaGGGACAGGCTCTGTTCTTG +
Preference number: 4 (lower is better)
Translates to: RRSILALLPTSGNVRLGWRYWDI*GQALFL
Trigger: CAAGAACAGAGCCTGTCCCCAGATGTCCCAGTAGCG...CCACCCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR CCA 90 bp GTCAAGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGCACAGAACGCTAGGTTaGGCCAGGCAAGCAGCCATG +
Preference number: 4 (lower is better)
Translates to: VKTVNISPSANIWQCEAGHRTLG*ARQAAM
Trigger: CATGGCTGCTTGCCTGGCCCAACCTAGCGTTCTGTG...CCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR CCA 90 bp ACCTTTATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGCTGAAGCTTGGGACCTaGCAGTGCGTCTTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: TFMGEVDGHLTSLMFHTVLKLGT*QCVFGE
Trigger: TTCTCCAAAGACGCACTGCCAGGTCCCAAGCTTCAG...CACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCATAAAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR CCA 90 bp CATAAACCAGTGAAATGCCTACCCCTATGGAGATGGGGAGCTGGTCATGGGACCCCTTCTGCCAACATCTaGCAATGTGAGGCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: HKPVKCLPLWRWGAGHGTPSANI*QCEAGV
Trigger: CACCCCAGCCTCACATTGCCAGATGTTGGCAGAAGG...GGTCCCATGACCAGCTCCCCATCTCCATAGGGGTAGGCATTTCACTGGTTTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR CCA 90 bp TCAAGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGGCTACCCCTATGGAGATaGGGAGCTGGTCATGGGACC +
Preference number: 4 (lower is better)
Translates to: SRRSILALLPTSGNVRLGLPLWR*GAGHGT
Trigger: GGTCCCATGACCAGCTCCCCATCTCCATAGGGGTAG...CCCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR CCA 90 bp GGAGTCACACCAGGCCCAAGCTGTTCAGACAGACCCCCAGCCTGCAGGGTGGTCTGCATAACTAGTAAATaGCACAGCCAAGATCGAAAC +
Preference number: 4 (lower is better)
Translates to: GVTPGPSCSDRPPACRVVCITSK*HSQDRN
Trigger: GTTTCGATCTTGGCTGTGCCATTTACTAGTTATGCA...GACCACCCTGCAGGCTGGGGGTCTGTCTGAACAGCTTGGGCCTGGTGTGACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR CCA 90 bp CCTTTATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGGCTTTACCCCAGGAGTTaGAGACTAGCCTGTGCAACA +
Preference number: 4 (lower is better)
Translates to: PLWGKWTDTSPPSCFTPWLYPRS*RLACAT
Trigger: TGTTGCACAGGCTAGTCTCCAACTCCTGGGGTAAAG...CCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCATAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR CCA 90 bp ACTGCACTTGAGTCCCAGCTCTTCACCACATCCCTAGGAGTCTTAAGAGGAAATGGCCCTGTCCCACCCTaGAATGTGGGACTGGAACCC +
Preference number: 4 (lower is better)
Translates to: TALESQLFTTSLGVLRGNGPVPP*NVGLEP
Trigger: GGGTTCCAGTCCCACATTCCAGGGTGGGACAGGGCC...ATTTCCTCTTAAGACTCCTAGGGATGTGGTGAAGAGCTGGGACTCAAGTGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR CCA 90 bp AGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTGAAATCCCAATGGACAGACTaGGGAGTCCCAGCATTTCAC +
Preference number: 4 (lower is better)
Translates to: STQARSLGPALEESRLLKSQWTD*GVPAFH
Trigger: GTGAAATGCTGGGACTCCCCAGTCTGTCCATTGGGA...TTTCAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR CCA 90 bp CTGAAGAAAAGCTTCTCATTAATGCCCGAAATGACGGATGCGATGGACAGAGAGCCCCAGCCTGCAGGGTaGTCCCCATCCAAGCCACCA +
Preference number: 4 (lower is better)
Translates to: LKKSFSLMPEMTDAMDREPQPAG*SPSKPP
Trigger: TGGTGGCTTGGATGGGGACCACCCTGCAGGCTGGGG...CTCTCTGTCCATCGCATCCGTCATTTCGGGCATTAATGAGAAGCTTTTCTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR TCA 90 bp GCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTGGCGAAATGGGCACCTTaGGCAAATCACTTAACATTT +
Preference number: 4 (lower is better)
Translates to: ASTQARSLGPALEESRLLAKWAP*ANHLTF
Trigger: AAATGTTAAGTGATTTGCTCAAGGTGCCCATTTCGC...CAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR TCA 90 bp GGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTGCGAAATGGGCACCTTaGGCAAATCACTTAACATTT +
Preference number: 4 (lower is better)
Translates to: GQHPGKKSGPSIGRKSPAAKWAP*ANHLTF
Trigger: AAATGTTAAGTGATTTGCTCAAGGTGCCCATTTCGC...AGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR TCA 90 bp AGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGGTGGGCACTGGGTGCCAGTTaGACATGTAGATGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: RRSILALLPTSGNVRLGWALGAS*TCRCCH
Trigger: ATGGCAGCATCTACATGTTCAACTGGCACCCAGTGC...CCACCCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR TCA 90 bp CCGTGGACTGCACTTGAGTCCCAGCTCTTCACCACATCCCTAGGAGTCTTAAGAGCACTGGGTGCCAGTTaGACATGTAGATGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: PWTALESQLFTTSLGVLRALGAS*TCRCCH
Trigger: ATGGCAGCATCTACATGTTCAACTGGCACCCAGTGC...TCTTAAGACTCCTAGGGATGTGGTGAAGAGCTGGGACTCAAGTGCAGTCCACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR TCA 90 bp TTAAGAGGAAATCAGTCTGATTTCTTCAGACAGGAGCAGCAAGAGCGGCCAGAGCCAGCCCCACAACAGTaGGGACGAAGGCCATCAGGT +
Preference number: 4 (lower is better)
Translates to: LRGNQSDFFRQEQQERPEPAPQQ*GRRPSG
Trigger: ACCTGATGGCCTTCGTCCTCACTGTTGTGGGGCTGG...CTCTGGCCGCTCTTGCTGCTCCTGTCTGAAGAAATCAGACTGATTTCCTCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR TCA 90 bp TCTCACTTGCTTACTAAGCACAGCAGTCTGAAGCTTGGGACCTGGCAGTGCGTCTGGGCGCTTCCAAGATaGAGCCAGAAGGATGTAGAG +
Preference number: 4 (lower is better)
Translates to: SHLLTKHSSLKLGTWQCVWALPR*SQKDVE
Trigger: CTCTACATCCTTCTGGCTTCATCTTGGAAGCGCCCA...GACGCACTGCCAGGTCCCAAGCTTCAGACTGCTGTGCTTAGTAAGCAAGTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR TCA 90 bp CAGGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGAAGAGGAAATCAGTCTaGTTTCTTCAGACAGGAGCA +
Preference number: 4 (lower is better)
Translates to: QASTQARSLGPALEESRLKRKSV*FLQTGA
Trigger: TGCTCCTGTCTGAAGAAATCAGACTGATTTCCTCTT...CAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR TCA 90 bp TGGACTGCACTTGAGTCCCAGCTCTTCACCACATCCCTAGGAGTCTTAAGAGGAGCGGGGCAGCCTAACTaGAATGCACACCTTTATGGG +
Preference number: 4 (lower is better)
Translates to: WTALESQLFTTSLGVLRGAGQPN*NAHLYG
Trigger: CCCATAAAGGTGTGCATTTCAGTTAGGCTGCCCCGC...TCCTCTTAAGACTCCTAGGGATGTGGTGAAGAGCTGGGACTCAAGTGCAGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR TCA 90 bp CTGATGCTGCCAGAGAGTAGGTGGGCTCCAAACCCCAGGCTTCTCACTTGCTTACCCTATTTCCTCCCCTaGAGAAGAGCAACAGCTCAA +
Preference number: 4 (lower is better)
Translates to: LMLPESRWAPNPRLLTCLPYFLP*RRATAQ
Trigger: TTGAGCTGTTGCTCTTCTTCAGGGGAGGAAATAGGG...TAAGCAAGTGAGAAGCCTGGGGTTTGGAGCCCACCTACTCTCTGGCAGCATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR TCA 90 bp TCAAGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGGCTAAGCACAGCAGTCTaGAGCTTGGGACCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: SRRSILALLPTSGNVRLGLSTAV*SLGPGS
Trigger: ACTGCCAGGTCCCAAGCTTCAGACTGCTGTGCTTAG...CCCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR TCA 90 bp TCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGGTGGACGTTGCCAGGAGTAGGATGCTaGTGCTGCCAGAGAGTAGGT +
Preference number: 4 (lower is better)
Translates to: SILALLPTSGNVRLGWTLPGVGC*CCQRVG
Trigger: ACCTACTCTCTGGCAGCATCAGCATCCTACTCCTGG...CAACGTCCACCCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR GCA 90 bp GTCAAGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGAGACACTGCCCTGAATaGCTACAGCCGGCTGGCAAT +
Preference number: 4 (lower is better)
Translates to: VKTVNISPSANIWQCEAGRHCPE*LQPAGN
Trigger: ATTGCCAGCCGGCTGTAGGCATTCAGGGCAGTGTCT...CCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR GCA 90 bp ACCTTTATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGGAGGTTCCTAGGAGATaGAGAAGACACTGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: TFMGEVDGHLTSLMFHTVEVPRR*RRHCPE
Trigger: TTCAGGGCAGTGTCTTCTGCATCTCCTAGGAACCTC...CACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCATAAAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR GCA 90 bp GTCAAGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGGCTGACGCCAAGGAGTaGAGAAGCCAAAGCCACCAA +
Preference number: 4 (lower is better)
Translates to: VKTVNISPSANIWQCEAGADAKE*RSQSHQ
Trigger: TTGGTGGCTTTGGCTTCTGCACTCCTTGGCGTCAGC...CCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR GCA 90 bp ACTGCACTTGAGTCCCAGCTCTTCACCACATCCCTAGGAGTCTTAAGAGGAAATAGAGCAGATGAAGCCTaGTCTGTGGCGGGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: TALESQLFTTSLGVLRGNRADEA*SVAGQP
Trigger: AGGCTGCCCCGCCACAGAGCAGGCTTCATCTGCTCT...ATTTCCTCTTAAGACTCCTAGGGATGTGGTGAAGAGCTGGGACTCAAGTGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000546151.5
CDS-3UTR GCA 90 bp AGGCTGGTAAAGGAGAAATCACACACCCTTGTCACAGTCAAGCCCTTCCTTGGGAGGGTCTTCCTATGTTaGCCAGGCTGGACTCCTTCC +
Preference number: 4 (lower is better)
Translates to: RLVKEKSHTLVTVKPFLGRVFLC*PGWTPS
Trigger: GGAAGGAGTCCAGCCTGGGCAACATAGGAAGACCCT...CCCAAGGAAGGGCTTGACTGTGACAAGGGTGTGTGATTTCTCCTTTACCAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR CCA 90 bp TCTCACTTGCTTACTAAGCACAGCAGTCTGAAGCTTGGGACCTGGCAGTGCGTCCTCAGAGAACTGGCCTaGGCTCCAATTCCTGCGAAA +
Preference number: 4 (lower is better)
Translates to: SHLLTKHSSLKLGTWQCVLRELA*APIPAK
Trigger: TTTCGCAGGAATTGGAGCCCAGGCCAGTTCTCTGAG...GACGCACTGCCAGGTCCCAAGCTTCAGACTGCTGTGCTTAGTAAGCAAGTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR CCA 90 bp TCTCACTTGCTTACTAAGCACAGCAGTCTGAAGCTTGGGACCTGGCAGTGCGTCGGGCAGGCTGTGGTATaGCCTGGTGGTGTTTTTCAA +
Preference number: 4 (lower is better)
Translates to: SHLLTKHSSLKLGTWQCVGQAVV*PGGVFQ
Trigger: TTGAAAAACACCACCAGGCCATACCACAGCCTGCCC...GACGCACTGCCAGGTCCCAAGCTTCAGACTGCTGTGCTTAGTAAGCAAGTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR CCA 90 bp TCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGGTGGACGTTGTCACTGGGCAGGCTGTaGTATGGCCTGGTGGTGTTT +
Preference number: 4 (lower is better)
Translates to: SILALLPTSGNVRLGWTLSLGRL*YGLVVF
Trigger: AAACACCACCAGGCCATACCACAGCCTGCCCAGTGA...CAACGTCCACCCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR CCA 90 bp GTCAAGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGTCACTGGGCAGGCTGTaGTATGGCCTGGTGGTGTTT +
Preference number: 4 (lower is better)
Translates to: VKTVNISPSANIWQCEAGSLGRL*YGLVVF
Trigger: AAACACCACCAGGCCATACCACAGCCTGCCCAGTGA...CCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR CCA 90 bp TTAAGAGGAAATCAGTCTGATTTCTTCAGACAGGAGCAGCAAGAGCGGCCAGAGCAAAGACCGCCTCACTaGGCAGGCTGTGGTATGGCC +
Preference number: 4 (lower is better)
Translates to: LRGNQSDFFRQEQQERPEQRPPH*AGCGMA
Trigger: GGCCATACCACAGCCTGCCCAGTGAGGCGGTCTTTG...CTCTGGCCGCTCTTGCTGCTCCTGTCTGAAGAAATCAGACTGATTTCCTCTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CCA 90 bp TTAAGAGGAAATCAGTCTGATTTCTTCAGACAGGAGCAGCAAGAGCGGCCAGAGGCATCCCGGTGCTGTTaGCAAAGACCGCCTCACTGG +
Preference number: 4 (lower is better)
Translates to: LRGNQSDFFRQEQQERPEASRCC*QRPPHW
Trigger: CCAGTGAGGCGGTCTTTGCCAACAGCACCGGGATGC...CTCTGGCCGCTCTTGCTGCTCCTGTCTGAAGAAATCAGACTGATTTCCTCTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CCA 90 bp ACTGCACTTGAGTCCCAGCTCTTCACCACATCCCTAGGAGTCTTAAGAGGAAATACCACCAGGAGCTCTTaGGAGCCCCTTCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: TALESQLFTTSLGVLRGNTTRSS*EPLPAA
Trigger: AGCAGCAGGAAGGGGCTCCCAAGAGCTCCTGGTGGT...ATTTCCTCTTAAGACTCCTAGGGATGTGGTGAAGAGCTGGGACTCAAGTGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CCA 90 bp AAGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGGTGAGCAGCTGGAAGAGGTaGAGCCGCACGGTCACAATA +
Preference number: 4 (lower is better)
Translates to: KTVNISPSANIWQCEAGVSSWKR*SRTVTI
Trigger: TATTGTGACCGTGCGGCTCCACCTCTTCCAGCTGCT...CACCCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR CCA 90 bp TCAAGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGGCGCTACTGGGACATCTaGGGACAGGCTCTGTTCTTG +
Preference number: 4 (lower is better)
Translates to: SRRSILALLPTSGNVRLGRYWDI*GQALFL
Trigger: CAAGAACAGAGCCTGTCCCCAGATGTCCCAGTAGCG...CCCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR CCA 90 bp ACTGCACTTGAGTCCCAGCTCTTCACCACATCCCTAGGAGTCTTAAGAGGAAATCCAGGCAAGCAGCCATaGTGGGGCCAGGTGAAGCAA +
Preference number: 4 (lower is better)
Translates to: TALESQLFTTSLGVLRGNPGKQP*WGQVKQ
Trigger: TTGCTTCACCTGGCCCCACCATGGCTGCTTGCCTGG...ATTTCCTCTTAAGACTCCTAGGGATGTGGTGAAGAGCTGGGACTCAAGTGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR CCA 90 bp CATAAACCAGTGAAATGCCTACCCCTATGGAGATGGGGAGCTGGTCATGGGACCGCTCAAGCTCTAGCATaGCACAGAACGCTAGGTTGG +
Preference number: 4 (lower is better)
Translates to: HKPVKCLPLWRWGAGHGTAQALA*HRTLGW
Trigger: CCAACCTAGCGTTCTGTGCCATGCTAGAGCTTGAGC...GGTCCCATGACCAGCTCCCCATCTCCATAGGGGTAGGCATTTCACTGGTTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR CCA 90 bp CTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTGACCAATGATGTAGGGTaGTTGACAGGATTAAATGTA +
Preference number: 4 (lower is better)
Translates to: LLRGAQAAPPGALGSPFLTNDVG*LTGLNV
Trigger: TACATTTAATCCTGTCAACCACCCTACATCATTGGT...CAGGAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR CCA 90 bp TGGACTGCACTTGAGTCCCAGCTCTTCACCACATCCCTAGGAGTCTTAAGAGGAATTAGCCGGGCATGGTaGCACACACTTGTAGGCCCA +
Preference number: 4 (lower is better)
Translates to: WTALESQLFTTSLGVLRGISRAW*HTLVGP
Trigger: TGGGCCTACAAGTGTGTGCCACCATGCCCGGCTAAT...TCCTCTTAAGACTCCTAGGGATGTGGTGAAGAGCTGGGACTCAAGTGCAGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR TCA 90 bp TCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGGTGGACGTTGGTCCAGACACCATTCTaGTCACGCACTCCTTTAGCC +
Preference number: 4 (lower is better)
Translates to: SILALLPTSGNVRLGWTLVQTPF*SRTPLA
Trigger: GGCTAAAGGAGTGCGTGATCAGAATGGTGTCTGGAC...CAACGTCCACCCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000447532.6
CDS-3UTR TCA 90 bp CTTTATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGGAGTCCTTCCATGGTTGTaGAACGTAAAGACAGCAACC +
Preference number: 4 (lower is better)
Translates to: LYGGSGRTPHLPHVSHRGVLPWL*NVKTAT
Trigger: GGTTGCTGTCTTTACGTTTCACAACCATGGAAGGAC...TCCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCATAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR TCA 90 bp TCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGGTGGACGTTGTGGGCGCTTCCAAGATaGAGCCAGAAGGATGTAGAG +
Preference number: 4 (lower is better)
Translates to: SILALLPTSGNVRLGWTLWALPR*SQKDVE
Trigger: CTCTACATCCTTCTGGCTTCATCTTGGAAGCGCCCA...CAACGTCCACCCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR TCA 90 bp GGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGGACTGCACTAAGAGGAAATCAGTCTaGTTTCTTCAGACAGGAGCA +
Preference number: 4 (lower is better)
Translates to: GEVDGHLTSLMFHTVDCTKRKSV*FLQTGA
Trigger: TGCTCCTGTCTGAAGAAATCAGACTGATTTCCTCTT...AGTGCAGTCCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR TCA 90 bp AGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGGTGGCCCTATTTCCTCCCCTaGAGAAGAGCAACAGCTCAA +
Preference number: 4 (lower is better)
Translates to: RRSILALLPTSGNVRLGWPYFLP*RRATAQ
Trigger: TTGAGCTGTTGCTCTTCTTCAGGGGAGGAAATAGGG...CCACCCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR TCA 90 bp GGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGGACTGCACTGATGACAAAACAATGTaGGCCCTCGAGAGATTTTTC +
Preference number: 4 (lower is better)
Translates to: GEVDGHLTSLMFHTVDCTDDKTM*ALERFF
Trigger: GAAAAATCTCTCGAGGGCTCACATTGTTTTGTCATC...AGTGCAGTCCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR GCA 90 bp CATAAACCAGTGAAATGCCTACCCCTATGGAGATGGGGAGCTGGTCATGGGACCGAGGTTCCTAGGAGATaGAGAAGACACTGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: HKPVKCLPLWRWGAGHGTEVPRR*RRHCPE
Trigger: TTCAGGGCAGTGTCTTCTGCATCTCCTAGGAACCTC...GGTCCCATGACCAGCTCCCCATCTCCATAGGGGTAGGCATTTCACTGGTTTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR GCA 90 bp TTAAGAGGAAATCAGTCTGATTTCTTCAGACAGGAGCAGCAAGAGCGGCCAGAGGGAGCCCCTTCCTGCTaGTTCACTCCCCATCATGCA +
Preference number: 4 (lower is better)
Translates to: LRGNQSDFFRQEQQERPEGAPSC*FTPHHA
Trigger: TGCATGATGGGGAGTGAAGCAGCAGGAAGGGGCTCC...CTCTGGCCGCTCTTGCTGCTCCTGTCTGAAGAAATCAGACTGATTTCCTCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR GCA 90 bp TCTCACTTGCTTACTAAGCACAGCAGTCTGAAGCTTGGGACCTGGCAGTGCGTCCCCAGGCTTCTCACTTaGTTACTAAGCACAGCAGTC +
Preference number: 4 (lower is better)
Translates to: SHLLTKHSSLKLGTWQCVPRLLT*LLSTAV
Trigger: GACTGCTGTGCTTAGTAAGCAAGTGAGAAGCCTGGG...GACGCACTGCCAGGTCCCAAGCTTCAGACTGCTGTGCTTAGTAAGCAAGTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR GCA 90 bp CCTCGTGTGAATGGAGGACCTGAGAGGCTGACGCCAAGGAGTGCAGAAGCCAAACATAAACCAGTGAAATaGCTACCCCTATGGAGATGG +
Preference number: 4 (lower is better)
Translates to: PRVNGGPERLTPRSAEAKHKPVK*LPLWRW
Trigger: CCATCTCCATAGGGGTAGGCATTTCACTGGTTTATG...TTTGGCTTCTGCACTCCTTGGCGTCAGCCTCTCAGGTCCTCCATTCACACGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR CCA 90 bp TCTCACTTGCTTACTAAGCACAGCAGTCTGAAGCTTGGGACCTGGCAGTGCGTCGAAGGGAGTAGAGGTTaGCAGTCCTTCCATGGTTGT +
Preference number: 4 (lower is better)
Translates to: SHLLTKHSSLKLGTWQCVEGSRG*QSFHGC
Trigger: ACAACCATGGAAGGACTGCCAACCTCTACTCCCTTC...GACGCACTGCCAGGTCCCAAGCTTCAGACTGCTGTGCTTAGTAAGCAAGTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR CCA 90 bp TCAAGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGGCCCAGGCAAGAAGTCTaGGCCCAGCATTGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: SRRSILALLPTSGNVRLGPRQEV*AQHWKK
Trigger: TTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGG...CCCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR CCA 90 bp TGGACTGCACTTGAGTCCCAGCTCTTCACCACATCCCTAGGAGTCTTAAGAGGAACATCCAGATGGGGCTaGATGGCAGAGCAGATGAAG +
Preference number: 4 (lower is better)
Translates to: WTALESQLFTTSLGVLRGTSRWG*MAEQMK
Trigger: CTTCATCTGCTCTGCCATCCAGCCCCATCTGGATGT...TCCTCTTAAGACTCCTAGGGATGTGGTGAAGAGCTGGGACTCAAGTGCAGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000546151.5
CDS-3UTR CCA 90 bp CTTCATAAACCAGTGAAATGCCTACCCCTATGGAGATGGGGAGCTGGTCATGGGACATCCAGATGGGGCTaGATGGCAGAGCAGATGAAG +
Preference number: 4 (lower is better)
Translates to: LHKPVKCLPLWRWGAGHGTSRWG*MAEQMK
Trigger: CTTCATCTGCTCTGCCATCCAGCCCCATCTGGATGT...CCCATGACCAGCTCCCCATCTCCATAGGGGTAGGCATTTCACTGGTTTATGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR CCA 90 bp GTCAAGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGGCTCAAGCTCTAGCATaGCACAGAACGCTAGGTTGG +
Preference number: 4 (lower is better)
Translates to: VKTVNISPSANIWQCEAGAQALA*HRTLGW
Trigger: CCAACCTAGCGTTCTGTGCCATGCTAGAGCTTGAGC...CCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR CCA 90 bp TCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGGTGGACGTTGCTGAAGCTTGGGACCTaGCAGTGCGTCTTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: SILALLPTSGNVRLGWTLLKLGT*QCVFGE
Trigger: TTCTCCAAAGACGCACTGCCAGGTCCCAAGCTTCAG...CAACGTCCACCCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR CCA 90 bp CAGCCAGTCAAGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGCAGCAGTCTGAAGCTTaGGACCTGGCAGTGCGTCTT +
Preference number: 4 (lower is better)
Translates to: QPVKTVNISPSANIWQCEQQSEA*DLAVRL
Trigger: AAGACGCACTGCCAGGTCCCAAGCTTCAGACTGCTG...CTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTTGACTGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR CCA 90 bp AGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGGTGGAAATGCCTACCCCTATaGAGATGGGGAGCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: RRSILALLPTSGNVRLGWKCLPL*RWGAGH
Trigger: ATGACCAGCTCCCCATCTCCATAGGGGTAGGCATTT...CCACCCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR CCA 90 bp TCTCACTTGCTTACTAAGCACAGCAGTCTGAAGCTTGGGACCTGGCAGTGCGTCAAATGCCTACCCCTATaGAGATGGGGAGCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: SHLLTKHSSLKLGTWQCVKCLPL*RWGAGH
Trigger: ATGACCAGCTCCCCATCTCCATAGGGGTAGGCATTT...GACGCACTGCCAGGTCCCAAGCTTCAGACTGCTGTGCTTAGTAAGCAAGTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR CCA 90 bp ACCTTTATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGAAATCTCTCCTCCCTTaGGTGAGTCCTGTGATCACA +
Preference number: 4 (lower is better)
Translates to: TFMGEVDGHLTSLMFHTVKSLLP*VSPVIT
Trigger: TGTGATCACAGGACTCACCCAAGGGAGGAGAGATTT...CACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCATAAAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR TCA 90 bp TTAAGAGGAAATCAGTCTGATTTCTTCAGACAGGAGCAGCAAGAGCGGCCAGAGGCGGGGCAGCCTAACTaGAATGCACACCTTTATGGG +
Preference number: 4 (lower is better)
Translates to: LRGNQSDFFRQEQQERPEAGQPN*NAHLYG
Trigger: CCCATAAAGGTGTGCATTTCAGTTAGGCTGCCCCGC...CTCTGGCCGCTCTTGCTGCTCCTGTCTGAAGAAATCAGACTGATTTCCTCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR TCA 90 bp TCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGGTGGACGTTGCCCTATTTCCTCCCCTaGAGAAGAGCAACAGCTCAA +
Preference number: 4 (lower is better)
Translates to: SILALLPTSGNVRLGWTLPYFLP*RRATAQ
Trigger: TTGAGCTGTTGCTCTTCTTCAGGGGAGGAAATAGGG...CAACGTCCACCCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR GCA 90 bp TCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGGTGGACGTTGGAGGTTCCTAGGAGATaGAGAAGACACTGCCCTGAA +
Preference number: 4 (lower is better)
Translates to: SILALLPTSGNVRLGWTLEVPRR*RRHCPE
Trigger: TTCAGGGCAGTGTCTTCTGCATCTCCTAGGAACCTC...CAACGTCCACCCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR CCA 90 bp AAGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGGTGGAAGGGAGTAGAGGTTaGCAGTCCTTCCATGGTTGT +
Preference number: 4 (lower is better)
Translates to: KTVNISPSANIWQCEAGVEGSRG*QSFHGC
Trigger: ACAACCATGGAAGGACTGCCAACCTCTACTCCCTTC...CACCCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR TCA 90 bp ACTGCACTTGAGTCCCAGCTCTTCACCACATCCCTAGGAGTCTTAAGAGGAAATGCACTGGGTGCCAGTTaGACATGTAGATGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: TALESQLFTTSLGVLRGNALGAS*TCRCCH
Trigger: ATGGCAGCATCTACATGTTCAACTGGCACCCAGTGC...ATTTCCTCTTAAGACTCCTAGGGATGTGGTGAAGAGCTGGGACTCAAGTGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR GCA 90 bp TTAAGAGGAAATCAGTCTGATTTCTTCAGACAGGAGCAGCAAGAGCGGCCAGAGAGATGCAGAAGACACTaGCCTGAATGCCTACAGCCG +
Preference number: 4 (lower is better)
Translates to: LRGNQSDFFRQEQQERPERCRRH*PECLQP
Trigger: CGGCTGTAGGCATTCAGGGCAGTGTCTTCTGCATCT...CTCTGGCCGCTCTTGCTGCTCCTGTCTGAAGAAATCAGACTGATTTCCTCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000546151.5
CDS-3UTR GCA 90 bp AGAAAGATCAATTCTGTTACCTTCCAGATCAGGAGTGGACCCAACCCCAAAATCGGAGCCCCTTCCTGCTaGTTCACTCCCCATCATGCA +
Preference number: 4 (lower is better)
Translates to: RKINSVTFQIRSGPNPKIGAPSC*FTPHHA
Trigger: TGCATGATGGGGAGTGAAGCAGCAGGAAGGGGCTCC...GATTTTGGGGTTGGGTCCACTCCTGATCTGGAAGGTAACAGAATTGATCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR GCA 90 bp CTGAAGAAAAGCTTCTCATTAATGCCCGAAATGACGGATGCGATGGACAGAGAGGCTGACGCCAAGGAGTaGAGAAGCCAAAGCCACCAA +
Preference number: 4 (lower is better)
Translates to: LKKSFSLMPEMTDAMDREADAKE*RSQSHQ
Trigger: TTGGTGGCTTTGGCTTCTGCACTCCTTGGCGTCAGC...CTCTCTGTCCATCGCATCCGTCATTTCGGGCATTAATGAGAAGCTTTTCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR GCA 90 bp CATAAACCAGTGAAATGCCTACCCCTATGGAGATGGGGAGCTGGTCATGGGACCCATAAACCAGTGAAATaGCTACCCCTATGGAGATGG +
Preference number: 4 (lower is better)
Translates to: HKPVKCLPLWRWGAGHGTHKPVK*LPLWRW
Trigger: CCATCTCCATAGGGGTAGGCATTTCACTGGTTTATG...GGTCCCATGACCAGCTCCCCATCTCCATAGGGGTAGGCATTTCACTGGTTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR CCA 90 bp ACTGCACTTGAGTCCCAGCTCTTCACCACATCCCTAGGAGTCTTAAGAGGAAATGGGCAGGCTGTGGTATaGCCTGGTGGTGTTTTTCAA +
Preference number: 4 (lower is better)
Translates to: TALESQLFTTSLGVLRGNGQAVV*PGGVFQ
Trigger: TTGAAAAACACCACCAGGCCATACCACAGCCTGCCC...ATTTCCTCTTAAGACTCCTAGGGATGTGGTGAAGAGCTGGGACTCAAGTGCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
CDS-3UTR CCA 90 bp CAGCCAGTCAAGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGAAATGCCTACCCCTATaGAGATGGGGAGCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: QPVKTVNISPSANIWQCEKCLPL*RWGAGH
Trigger: ATGACCAGCTCCCCATCTCCATAGGGGTAGGCATTT...CTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTTGACTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR TCA 90 bp CATAAACCAGTGAAATGCCTACCCCTATGGAGATGGGGAGCTGGTCATGGGACCGCGAAATGGGCACCTTaGGCAAATCACTTAACATTT +
Preference number: 4 (lower is better)
Translates to: HKPVKCLPLWRWGAGHGTAKWAP*ANHLTF
Trigger: AAATGTTAAGTGATTTGCTCAAGGTGCCCATTTCGC...GGTCCCATGACCAGCTCCCCATCTCCATAGGGGTAGGCATTTCACTGGTTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR TCA 90 bp CAGCCAGTCAAGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGTCCTTCCATGGTTGTaGAACGTAAAGACAGCAACC +
Preference number: 4 (lower is better)
Translates to: QPVKTVNISPSANIWQCEVLPWL*NVKTAT
Trigger: GGTTGCTGTCTTTACGTTTCACAACCATGGAAGGAC...CTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTTGACTGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR TCA 90 bp TTAAGAGGAAATCAGTCTGATTTCTTCAGACAGGAGCAGCAAGAGCGGCCAGAGTTGAGTGCAGGAGTTTaGTGCTGCAGTGAGCTATGG +
Preference number: 4 (lower is better)
Translates to: LRGNQSDFFRQEQQERPELSAGV*CCSELW
Trigger: CCATAGCTCACTGCAGCATCAAACTCCTGCACTCAA...CTCTGGCCGCTCTTGCTGCTCCTGTCTGAAGAAATCAGACTGATTTCCTCTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR GCA 90 bp TCCTTGGGGAAGAAGATAAGGCCACACTTCACCCCACAGAACCACAGTGATTTGCTTGGTTTCCTGCTGTaGCACAGGGTAAGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: SLGKKIRPHFTPQNHSDLLGFLL*HRVSLL
Trigger: AAGAAGACTTACCCTGTGGCACAGCAGGAAACCAAG...CAAATCACTGTGGTTCTGTGGGGTGAAGTGTGGCCTTATCTTCTTCCCCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR CCA 90 bp TTAAGAGGAAATCAGTCTGATTTCTTCAGACAGGAGCAGCAAGAGCGGCCAGAGTGCTGCAGTGAGCTATaGTCACACCATTGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: LRGNQSDFFRQEQQERPECCSEL*SHHCSP
Trigger: TGGAGAGCAATGGTGTGACCATAGCTCACTGCAGCA...CTCTGGCCGCTCTTGCTGCTCCTGTCTGAAGAAATCAGACTGATTTCCTCTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR CAA 72 bp CCCTTGGGTGAGTCCTGTGATCACAGGGTGTATCTTTaGAAGACCCTATTCCCTCCTCTTCACCTTAGAGTT +
Preference number: 4 (lower is better)
Translates to: PLGESCDHRVYL*KTLFPPLHLRV
Trigger: AACTCTAAGGTGAAGAGGAGGGAATAGGGTCTTCAAAAGATACACCCTGTGATCACAGGACTCACCCAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR TCA 90 bp AAGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGGTGAAGAGGAAATCAGTCTaGTTTCTTCAGACAGGAGCA +
Preference number: 4 (lower is better)
Translates to: KTVNISPSANIWQCEAGVKRKSV*FLQTGA
Trigger: TGCTCCTGTCTGAAGAAATCAGACTGATTTCCTCTT...CACCCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR TCA 90 bp ACTGCACTTGAGTCCCAGCTCTTCACCACATCCCTAGGAGTCTTAAGAGGAAATAGTTTGATGCTGCAGTaGGCTATGGTCACACCATTG +
Preference number: 4 (lower is better)
Translates to: TALESQLFTTSLGVLRGNSLMLQ*AMVTPL
Trigger: CAATGGTGTGACCATAGCTCACTGCAGCATCAAACT...ATTTCCTCTTAAGACTCCTAGGGATGTGGTGAAGAGCTGGGACTCAAGTGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR TCA 90 bp CAGCCAGTCAAGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCGAAATGGGCACCTTaGGCAAATCACTTAACATTT +
Preference number: 4 (lower is better)
Translates to: QPVKTVNISPSANIWQCEAKWAP*ANHLTF
Trigger: AAATGTTAAGTGATTTGCTCAAGGTGCCCATTTCGC...CTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTTGACTGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR GCA 90 bp AGCTGTAATAATCCTTTTACCCATGAGGAAACTGAAGCTCAAAGCAATGAAATTGAGGGGAGCACAGGCTaGACCACCAGGAGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: SCNNPFTHEETEAQSNEIEGSTG*TTRSSW
Trigger: CCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTC...AATTTCATTGCTTTGAGCTTCAGTTTCCTCATGGGTAAAAGGATTATTACAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR TCA 90 bp ACTGCACTTGAGTCCCAGCTCTTCACCACATCCCTAGGAGTCTTAAGAGGAAATGCGAAATGGGCACCTTaGGCAAATCACTTAACATTT +
Preference number: 4 (lower is better)
Translates to: TALESQLFTTSLGVLRGNAKWAP*ANHLTF
Trigger: AAATGTTAAGTGATTTGCTCAAGGTGCCCATTTCGC...ATTTCCTCTTAAGACTCCTAGGGATGTGGTGAAGAGCTGGGACTCAAGTGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR TCA 90 bp AGCTGTAATAATCCTTTTACCCATGAGGAAACTGAAGCTCAAAGCAATGAAATTGTCCAGACACCATTCTaGTCACGCACTCCTTTAGCC +
Preference number: 4 (lower is better)
Translates to: SCNNPFTHEETEAQSNEIVQTPF*SRTPLA
Trigger: GGCTAAAGGAGTGCGTGATCAGAATGGTGTCTGGAC...AATTTCATTGCTTTGAGCTTCAGTTTCCTCATGGGTAAAAGGATTATTACAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR TCA 90 bp AGCTGTAATAATCCTTTTACCCATGAGGAAACTGAAGCTCAAAGCAATGAAATTGGTGCTAAATCAAACTaGTGCTCAATAAATATCTGC +
Preference number: 4 (lower is better)
Translates to: SCNNPFTHEETEAQSNEIGAKSN*CSINIC
Trigger: GCAGATATTTATTGAGCATCAGTTTGATTTAGCACC...AATTTCATTGCTTTGAGCTTCAGTTTCCTCATGGGTAAAAGGATTATTACAGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546151.5
3UTR CAA 72 bp ACAACAATACCAATCAATACCAATGATGTAGGGTGGTaGACAGGATTAAATGTAAGGTGCTTAGTACTGTTT +
Preference number: 4 (lower is better)
Translates to: TTIPINTNDVGW*TGLNVRCLVLF
Trigger: AAACAGTACTAAGCACCTTACATTTAATCCTGTCAACCACCCTACATCATTGGTATTGATTGGTATTGTTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS CCA 90 bp AAGCCTCCCACTACGAGCCGGCCCTCAGCAAGGCCGTGCGCAGTGTaGGCGGGAGCCCTAAGTCAGCTAGCGGCGACGCTGGGAGGGCCC +
Preference number: 5 (lower is better)
Translates to: KPPTTSRPSARPCAV*AGALSQLAATLGGP
Trigger: GGGCCCTCCCAGCGTCGCCGCTAGCTGACTTAGGGCTCCCGCCCACACTGCGCACGGCCTTGCTGAGGGCCGGCTCGTAGTGGGAGGCTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426130.6
ENST00000535152.1
ENST00000536687.1
ENST00000537680.5
CDS TCA 90 bp ATAGGCTCGCAGCACTTCCAGTCGCGCGCGAGGCCTCCTGGGAAGTaGAGTCCGGAGACCAGGGGTGGCCGGCTCCCAGCGCGCCAAGCT +
Preference number: 5 (lower is better)
Translates to: IGSQHFQSRARPPGK*SPETRGGRLPARQA
Trigger: AGCTTGGCGCGCTGGGAGCCGGCCACCCCTGGTCTCCGGACTTCACTTCCCAGGAGGCCTCGCGCGCGACTGGAAGTGCTGCGAGCCTAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426130.6
ENST00000535152.1
ENST00000536687.1
CDS CCA 90 bp CCTTCTTATAGGCTCGCAGCACTTCCAGTCGCGCGCGAGGCCTCCTaGGAAGTGAAGTCCGGAGACCAGGGGTGGCCGGCTCCCAGCGCG +
Preference number: 5 (lower is better)
Translates to: PSYRLAALPVAREAS*EVKSGDQGWPAPSA
Trigger: CGCGCTGGGAGCCGGCCACCCCTGGTCTCCGGACTTCACTTCCCAGGAGGCCTCGCGCGCGACTGGAAGTGCTGCGAGCCTATAAGAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426130.6
ENST00000535152.1
ENST00000536687.1
CDS GCA 90 bp GCCGCTCCCGAGGTTCCTAGGAGATGCAGAAGACACTGCCCTGAATaGCTACAGCCGGCTGGCAATGCCGCCCCAGAGCAGAGCGGCGGG +
Preference number: 5 (lower is better)
Translates to: AAPEVPRRCRRHCPE*LQPAGNAAPEQSGG
Trigger: CCCGCCGCTCTGCTCTGGGGCGGCATTGCCAGCCGGCTGTAGGCATTCAGGGCAGTGTCTTCTGCATCTCCTAGGAACCTCGGGAGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000426130.6
ENST00000447532.6
ENST00000535152.1
ENST00000536687.1
ENST00000540317.5
CDS CCA 90 bp AGGCCATCAGGTGCAGCGCTGCATGGAGGAGTTTCCAGGGCAGTTTaGGCCCCACCCACGACTGGGGCAGGCGGTACACCAGTGACGCCC +
Preference number: 5 (lower is better)
Translates to: RPSGAALHGGVSRAV*APPTTGAGGTPVTP
Trigger: GGGCGTCACTGGTGTACCGCCTGCCCCAGTCGTGGGTGGGGCCCAAACTGCCCTGGAAACTCCTCCATGCAGCGCTGCACCTGATGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540317.5
CDS TCA 90 bp GCCCCGCCTCTCATCCCCCATCCAGAGGAGGCGGAAATGTTCAGGTaGACGCGAAGCCTCCCACTACGAGCCGGCCCTCAGCAAGGCCGT +
Preference number: 5 (lower is better)
Translates to: APPLIPHPEEAEMFR*TRSLPLRAGPQQGR
Trigger: ACGGCCTTGCTGAGGGCCGGCTCGTAGTGGGAGGCTTCGCGTTCACCTGAACATTTCCGCCTCCTCTGGATGGGGGATGAGAGGCGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426130.6
ENST00000535152.1
ENST00000536687.1
ENST00000537680.5
CDS TCA 90 bp GGGCAGTTTGGGCCCCACCCACGACTGGGGCAGGCGGTACACCAGTaGCGCTGGGAGGTGGAGCTTGCAGTGAGCCGATATCACGCCACT +
Preference number: 5 (lower is better)
Translates to: GQFGPHPRLGQAVHQ*RWEVELAVSRYHAT
Trigger: AGTGGCGTGATATCGGCTCACTGCAAGCTCCACCTCCCAGCGTCACTGGTGTACCGCCTGCCCCAGTCGTGGGTGGGGCCCAAACTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538263.5
CDS TCA 90 bp CCGAAAGGATCTGTAGCCACACCCCCTAACCACAGTGGGACGAAGTaGGGCCGGGATCTCCGGAACCCGCCTCTCGCTACCAGGCGCCGG +
Preference number: 5 (lower is better)
Translates to: PKGSVATPPNHSGTK*GRDLRNPPLATRRR
Trigger: CCGGCGCCTGGTAGCGAGAGGCGGGTTCCGGAGATCCCGGCCTCACTTCGTCCCACTGTGGTTAGGGGGTGTGGCTACAGATCCTTTCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545361.5
CDS GCA 90 bp GCCGGAGCTGCCGCTCCCGAGGTTCCTAGGAGATGCAGAAGACACTaGCCTGAATGCCTACAGCCGGCTGGCAATGCCGCCCCAGAGCAG +
Preference number: 5 (lower is better)
Translates to: AGAAAPEVPRRCRRH*PECLQPAGNAAPEQ
Trigger: CTGCTCTGGGGCGGCATTGCCAGCCGGCTGTAGGCATTCAGGGCAGTGTCTTCTGCATCTCCTAGGAACCTCGGGAGCGGCAGCTCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426130.6
ENST00000447532.6
ENST00000535152.1
ENST00000536687.1
ENST00000539128.5
ENST00000540317.5
ENST00000546151.5
CDS CCA 90 bp AGGCCATCAGGTGCAGCGCTGCATGGAGGAGTTTCCAGGGCAGTTTaGGCCCCACCCACGACTGGGGCAGGCGGTACACCAGTGACGCAC +
Preference number: 5 (lower is better)
Translates to: RPSGAALHGGVSRAV*APPTTGAGGTPVTH
Trigger: GTGCGTCACTGGTGTACCGCCTGCCCCAGTCGTGGGTGGGGCCCAAACTGCCCTGGAAACTCCTCCATGCAGCGCTGCACCTGATGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
ENST00000535177.1
ENST00000536915.5
ENST00000537364.5
ENST00000539128.5
ENST00000542361.5
CDS CCA 90 bp GCTGCATGGAGGAGTTTCCAGGGCAGTTTGGGCCCCACCCACGACTaGGGCAGGCGGTACACCAGTGACGCTGGGAGGTGGAGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: AAWRSFQGSLGPTHD*GRRYTSDAGRWSLQ
Trigger: CTGCAAGCTCCACCTCCCAGCGTCACTGGTGTACCGCCTGCCCCAGTCGTGGGTGGGGCCCAAACTGCCCTGGAAACTCCTCCATGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538263.5
CDS CCA 90 bp AGGCCATCAGGTGCAGCGCTGCATGGAGGAGTTTCCAGGGCAGTTTaGGCCCCACCCACGACTGGGGCAGGCGGTACACCAGTGACGCTG +
Preference number: 5 (lower is better)
Translates to: RPSGAALHGGVSRAV*APPTTGAGGTPVTL
Trigger: CAGCGTCACTGGTGTACCGCCTGCCCCAGTCGTGGGTGGGGCCCAAACTGCCCTGGAAACTCCTCCATGCAGCGCTGCACCTGATGGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538263.5
ENST00000540139.5
CDS TCA 90 bp GACACCATTCTGATCACGCACTCCCCTAACCACAGTGGGACGAAGTaGGGCCGGGATCTCCGGAACCCGCCTCTCGCTACCAGGCGCCGG +
Preference number: 5 (lower is better)
Translates to: DTILITHSPNHSGTK*GRDLRNPPLATRRR
Trigger: CCGGCGCCTGGTAGCGAGAGGCGGGTTCCGGAGATCCCGGCCTCACTTCGTCCCACTGTGGTTAGGGGAGTGCGTGATCAGAATGGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536687.1
CDS GCA 90 bp TCGCTACCAGGCGCCGGAGCTGCCGCTCCCGAGGTTCCTAGGAGATaGAGAAGACACTGCCCTGAATGCCTACAGCCGGCTGGCAATGCC +
Preference number: 5 (lower is better)
Translates to: SLPGAGAAAPEVPRR*RRHCPECLQPAGNA
Trigger: GGCATTGCCAGCCGGCTGTAGGCATTCAGGGCAGTGTCTTCTGCATCTCCTAGGAACCTCGGGAGCGGCAGCTCCGGCGCCTGGTAGCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
ENST00000535152.1
ENST00000536687.1
ENST00000539128.5
ENST00000540317.5
ENST00000542411.5
ENST00000545361.5
ENST00000546151.5
CDS CCA 90 bp GCTGCATGGAGGAGTTTCCAGGGCAGTTTGGGCCCCACCCACGACTaGGGCAGGCGGTACACCAGTGACGCCCTAACCACAGTGGGACGA +
Preference number: 5 (lower is better)
Translates to: AAWRSFQGSLGPTHD*GRRYTSDALTTVGR
Trigger: TCGTCCCACTGTGGTTAGGGCGTCACTGGTGTACCGCCTGCCCCAGTCGTGGGTGGGGCCCAAACTGCCCTGGAAACTCCTCCATGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540317.5
CDS CCA 90 bp GCTGCATGGAGGAGTTTCCAGGGCAGTTTGGGCCCCACCCACGACTaGGGCAGGCGGTACACCAGTGACGCTGCAGGAGAGAGTAGTGCC +
Preference number: 5 (lower is better)
Translates to: AAWRSFQGSLGPTHD*GRRYTSDAAGESSA
Trigger: GGCACTACTCTCTCCTGCAGCGTCACTGGTGTACCGCCTGCCCCAGTCGTGGGTGGGGCCCAAACTGCCCTGGAAACTCCTCCATGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540139.5
CDS GCA 90 bp CCTCGGCGTTTCTTCTCCAAGTCCGAAGTCAGGGTCCAGGACTGCTaGGATGCATCAGCCCCGCCTCTCATCCCCCATCCAGAGGAGGCG +
Preference number: 5 (lower is better)
Translates to: PRRFFSKSEVRVQDC*DASAPPLIPHPEEA
Trigger: CGCCTCCTCTGGATGGGGGATGAGAGGCGGGGCTGATGCATCGCAGCAGTCCTGGACCCTGACTTCGGACTTGGAGAAGAAACGCCGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426130.6
ENST00000535152.1
ENST00000536687.1
ENST00000537680.5
CDS-3UTR CAA 90 bp AGCGGTCAGCTCCTCAGCAGAAGCTGCGTGGGCCGCCACTCCCCCTTTCTGCAAAGCATCCCGGTGCTGTaGGCAAAGACCGCCTCACTG +
Preference number: 5 (lower is better)
Translates to: SGQLLSRSCVGRHSPFLQSIPVL*AKTASL
Trigger: CAGTGAGGCGGTCTTTGCCAACAGCACCGGGATGCT...TTGCAGAAAGGGGGAGTGGCGGCCCACGCAGCTTCTGCTGAGGAGCTGACCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000546151.5
CDS-3UTR CAA 90 bp CTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTGAGCATCCCGGTGCTGTaGGCAAAGACCGCCTCACTG +
Preference number: 5 (lower is better)
Translates to: LLRGAQAAPPGALGSPFLSIPVL*AKTASL
Trigger: CAGTGAGGCGGTCTTTGCCAACAGCACCGGGATGCT...CAGGAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000539890.1
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CAA 90 bp GAGCTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCAGCATCCCGGTGCTGTaGGCAAAGACCGCCTCACTG +
Preference number: 5 (lower is better)
Translates to: ELLRGAQAAPPGALGSPFSIPVL*AKTASL
Trigger: CAGTGAGGCGGTCTTTGCCAACAGCACCGGGATGCT...GAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000539890.1
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CAA 90 bp TCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTGCTGGACAGGCTCTGTTCTaGGGAGAGCAGGTCACCAGG +
Preference number: 5 (lower is better)
Translates to: SEGSTGCTTRSSWEPLPAGQALF*GEQVTR
Trigger: CCTGGTGACCTGCTCTCCCAAGAACAGAGCCTGTCC...AGCAGGAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR CAA 90 bp CTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTGCCCAGCAGGTGGAGGTaGCAGCGAGCCAAGATTGTG +
Preference number: 5 (lower is better)
Translates to: LLRGAQAAPPGALGSPFLPSRWR*QRAKIV
Trigger: CACAATCTTGGCTCGCTGCAACCTCCACCTGCTGGG...CAGGAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS TCA 90 bp CACTTAACATTTGCAGGACTCACCCCTAACCACAGTGGGACGAAGTaGGGCCGGGATCTCCGGAACCCGCCTCTCGCTACCAGGCGCCGG +
Preference number: 5 (lower is better)
Translates to: HLTFAGLTPNHSGTK*GRDLRNPPLATRRR
Trigger: CCGGCGCCTGGTAGCGAGAGGCGGGTTCCGGAGATCCCGGCCTCACTTCGTCCCACTGTGGTTAGGGGTGAGTCCTGCAAATGTTAAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
ENST00000535152.1
ENST00000537680.5
ENST00000538263.5
ENST00000539128.5
ENST00000540755.5
ENST00000542411.5
ENST00000544118.5
ENST00000546151.5
CDS GCA 90 bp AACCAGCCCCACAACAGTGAGGACGAAGGCCATCAGGTGCAGCGCTaGATGGAGGAGTTTCCAGGGCAGTTTGGGCCCCACCCACGACTG +
Preference number: 5 (lower is better)
Translates to: NQPHNSEDEGHQVQR*MEEFPGQFGPHPRL
Trigger: CAGTCGTGGGTGGGGCCCAAACTGCCCTGGAAACTCCTCCATGCAGCGCTGCACCTGATGGCCTTCGTCCTCACTGTTGTGGGGCTGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
ENST00000535177.1
ENST00000536915.5
ENST00000537364.5
ENST00000538263.5
ENST00000539128.5
ENST00000540139.5
ENST00000540317.5
ENST00000542361.5
CDS GCA 90 bp CCTCCTCGGCGTTTCTTCTCCAAGTCCGAAGTCAGGGTCCAGGACTaGTGCGATGCATCAGCCCCGCCTCTCATCCCCCATCCAGAGGAG +
Preference number: 5 (lower is better)
Translates to: PPRRFFSKSEVRVQD*CDASAPPLIPHPEE
Trigger: CTCCTCTGGATGGGGGATGAGAGGCGGGGCTGATGCATCGCAGCAGTCCTGGACCCTGACTTCGGACTTGGAGAAGAAACGCCGAGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426130.6
ENST00000535152.1
ENST00000536687.1
ENST00000537680.5
CDS-3UTR CAA 90 bp GAGCTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCAGTCTGGGCCCAGCATaGGAAGAAAGTCGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: ELLRGAQAAPPGALGSPFSLGPA*EESRLL
Trigger: CAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACT...GAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CAA 90 bp CTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTGAGTCTGGGCCCAGCATaGGAAGAAAGTCGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: LLRGAQAAPPGALGSPFLSLGPA*EESRLL
Trigger: CAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACT...CAGGAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CAA 90 bp TCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTGCTAGTCTGGGCCCAGCATaGGAAGAAAGTCGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: SEGSTGCTTRSSWEPLPASLGPA*EESRLL
Trigger: CAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACT...AGCAGGAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CAA 90 bp GAGCTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCACCGTGGACTGCACTaGAGTCCCAGCTCTTCACCA +
Preference number: 5 (lower is better)
Translates to: ELLRGAQAAPPGALGSPFHRGLH*SPSSSP
Trigger: TGGTGAAGAGCTGGGACTCAAGTGCAGTCCACGGTG...GAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CAA 90 bp GGAGTCACACCAGGCCCAAGCTGTTCAGACAGACCCCCAGCCTGCAGGGTGGTCCACCGTGGACTGCACTaGAGTCCCAGCTCTTCACCA +
Preference number: 5 (lower is better)
Translates to: GVTPGPSCSDRPPACRVVHRGLH*SPSSSP
Trigger: TGGTGAAGAGCTGGGACTCAAGTGCAGTCCACGGTG...GACCACCCTGCAGGCTGGGGGTCTGTCTGAACAGCTTGGGCCTGGTGTGACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR CAA 90 bp CTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCTGCTGGCTTTACCCCAGGAGTaGGAGACTAGCCTGTGCAAC +
Preference number: 5 (lower is better)
Translates to: LRGAQAAPPGALGSPFLLALPQE*ETSLCN
Trigger: GTTGCACAGGCTAGTCTCCAACTCCTGGGGTAAAGC...CAGCAGGAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS GCA 90 bp AAGACAGCAACCAGCCCCACAACAGTGAGGACGAAGGCCATCAGGTaGAGCGCTGCATGGAGGAGTTTCCAGGGCAGTTTGGGCCCCACC +
Preference number: 5 (lower is better)
Translates to: KTATSPTTVRTKAIR*SAAWRSFQGSLGPT
Trigger: GGTGGGGCCCAAACTGCCCTGGAAACTCCTCCATGCAGCGCTGCACCTGATGGCCTTCGTCCTCACTGTTGTGGGGCTGGTTGCTGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
ENST00000535177.1
ENST00000536915.5
ENST00000537364.5
ENST00000538263.5
ENST00000539128.5
ENST00000540139.5
ENST00000540317.5
ENST00000542361.5
CDS-3UTR CAA 90 bp GCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTGAGCATCCCGGTGCTGTaGGCAAAGACCGCCTCACTG +
Preference number: 5 (lower is better)
Translates to: ASTQARSLGPALEESRLLSIPVL*AKTASL
Trigger: CAGTGAGGCGGTCTTTGCCAACAGCACCGGGATGCT...CAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000536915.5
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CAA 90 bp GGATGTAGAGCACCAGCAGCCCAAAGGCCACCACCAGCATCCCGGTGCTGTTGGCACCGTGGACTGCACTaGAGTCCCAGCTCTTCACCA +
Preference number: 5 (lower is better)
Translates to: GCRAPAAQRPPPASRCCWHRGLH*SPSSSP
Trigger: TGGTGAAGAGCTGGGACTCAAGTGCAGTCCACGGTG...CCAACAGCACCGGGATGCTGGTGGTGGCCTTTGGGCTGCTGGTGCTCTACATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540755.5
ENST00000546151.5
CDS-3UTR CAA 90 bp CAGGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGGCACAGAACGCTAGGTaGGGCCAGGCAAGCAGCCAT +
Preference number: 5 (lower is better)
Translates to: QASTQARSLGPALEESRLAQNAR*GQASSH
Trigger: ATGGCTGCTTGCCTGGCCCAACCTAGCGTTCTGTGC...CAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS GCA 90 bp GCGTTTCTTCTCCAAGTCCGAAGTCAGGGTCCAGGACTGCTGCGATaGATCAGCCCCGCCTCTCATCCCCCATCCAGAGGAGGCGGAAAT +
Preference number: 5 (lower is better)
Translates to: AFLLQVRSQGPGLLR*ISPASHPPSRGGGN
Trigger: ATTTCCGCCTCCTCTGGATGGGGGATGAGAGGCGGGGCTGATGCATCGCAGCAGTCCTGGACCCTGACTTCGGACTTGGAGAAGAAACGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426130.6
ENST00000535152.1
ENST00000536687.1
ENST00000537680.5
CDS CCA 90 bp AGGCCACCACCAGCATCCCGGTGCTGTTGGCAAAGACCGCCTCACTaGGCAGGCTGTGGTATGGCCTGGTGGTGTTTTTCCACCTCCATA +
Preference number: 5 (lower is better)
Translates to: RPPPASRCCWQRPPH*AGCGMAWWCFSTSI
Trigger: TATGGAGGTGGAAAAACACCACCAGGCCATACCACAGCCTGCCCAGTGAGGCGGTCTTTGCCAACAGCACCGGGATGCTGGTGGTGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539890.1
CDS-3UTR CAA 90 bp CTGAAACCAGCCGGGAGCCCTGGGAAGAGCAGAGCTTCTGAGGGGAGCACAGGCCCCCAGGCTTCTCACTaGCTTACTAAGCACAGCAGT +
Preference number: 5 (lower is better)
Translates to: LKPAGSPGKSRASEGSTGPQASH*LTKHSS
Trigger: ACTGCTGTGCTTAGTAAGCAAGTGAGAAGCCTGGGG...GCCTGTGCTCCCCTCAGAAGCTCTGCTCTTCCCAGGGCTCCCGGCTGGTTTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR CAA 90 bp GGCAGGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCGACATCCCAGTGGCTTaGAAGGCTCCAGCCAGTCAA +
Preference number: 5 (lower is better)
Translates to: GRPAPRQEVWAQHWKKVADIPVA*KAPASQ
Trigger: TTGACTGGCTGGAGCCTTCAAAGCCACTGGGATGTC...GGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR CAA 90 bp GAGCTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTCCCACCCTCAAGTTACTaGGTTTCCTGCTGTGCCACA +
Preference number: 5 (lower is better)
Translates to: ELLRGAQAAPPGALGSPFPPSSY*VSCCAT
Trigger: TGTGGCACAGCAGGAAACCAAGTAACTTGAGGGTGG...GAAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR CAA 90 bp CCTTTATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGGCTGGGATGCGCTGGTTaGGGACCAGTGCTCCCCATC +
Preference number: 5 (lower is better)
Translates to: PLWGKWTDTSPPSCFTPWLGCAG*GPVLPI
Trigger: GATGGGGAGCACTGGTCCCAAACCAGCGCATCCCAG...CCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCATAAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS TCA 90 bp CAGCAAAGCCCAGGAACCACTGGCAGGCGAAGAGGAAGACAGTGGTaGTGCCCAGCCAGCTGTGAAGGGAGTAGAGGTTGGCAGTCCTTC +
Preference number: 5 (lower is better)
Translates to: QQSPGTTGRRRGRQW*CPASCEGSRGWQSF
Trigger: GAAGGACTGCCAACCTCTACTCCCTTCACAGCTGGCTGGGCATCACCACTGTCTTCCTCTTCGCCTGCCAGTGGTTCCTGGGCTTTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
ENST00000536915.5
ENST00000537364.5
ENST00000540139.5
ENST00000540317.5
ENST00000542361.5
CDS GCA 90 bp GCCCCAAGCCCAACATTTACAAAGGCCAGCCTTGGAGAGGGAAAGTaGAGCTTTGTCCAGCCTGAGCCCTATCCCGCCTCCCTTCCTGAC +
Preference number: 5 (lower is better)
Translates to: APSPTFTKASLGEGK*SFVQPEPYPASLPD
Trigger: GTCAGGAAGGGAGGCGGGATAGGGCTCAGGCTGGACAAAGCTGCACTTTCCCTCTCCAAGGCTGGCCTTTGTAAATGTTGGGCTTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542411.5
CDS CCA 90 bp AGGCCACCACCAGCATCCCGGTGCTGTTGGCAAAGACCGCCTCACTaGGCAGGCTGTGGTATGGCCTGGTGGTGTTTTTCCTTAGAGTTG +
Preference number: 5 (lower is better)
Translates to: RPPPASRCCWQRPPH*AGCGMAWWCFSLEL
Trigger: CAACTCTAAGGAAAAACACCACCAGGCCATACCACAGCCTGCCCAGTGAGGCGGTCTTTGCCAACAGCACCGGGATGCTGGTGGTGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540317.5
CDS-3UTR CAA 90 bp GGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGGACTGCACTAGTCTGGGCCCAGCATaGGAAGAAAGTCGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: GEVDGHLTSLMFHTVDCTSLGPA*EESRLL
Trigger: CAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACT...AGTGCAGTCCACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CAA 90 bp GGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTGACATCCCAGTGGCTTaGAAGGCTCCAGCCAGTCAA +
Preference number: 5 (lower is better)
Translates to: GQHPGKKSGPSIGRKSPADIPVA*KAPASQ
Trigger: TTGACTGGCTGGAGCCTTCAAAGCCACTGGGATGTC...AGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR CAA 90 bp GAGGGCAGGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCCTCTTCACCTTAGAGTaGGGGACCCCACTGCACTCA +
Preference number: 5 (lower is better)
Translates to: EGRPAPRQEVWAQHWKKVLFTLE*GTPLHS
Trigger: TGAGTGCAGTGGGGTCCCCAACTCTAAGGTGAAGAG...GACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCCTGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR CAA 90 bp AAGGCCACCACCAGCATCCCGGTGCTGTTGGCAAAGACCGCCTCACTGGGCAGGAGAAATCACACACCCTaGTCACAGTCAAGCCCTTCC +
Preference number: 5 (lower is better)
Translates to: KATTSIPVLLAKTASLGRRNHTP*SQSSPS
Trigger: GGAAGGGCTTGACTGTGACAAGGGTGTGTGATTTCT...CCTGCCCAGTGAGGCGGTCTTTGCCAACAGCACCGGGATGCTGGTGGTGGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR CAA 90 bp ACCTTTATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCGTGGGACAGGCTCTGTTCTaGGGAGAGCAGGTCACCAGG +
Preference number: 5 (lower is better)
Translates to: TFMGEVDGHLTSLMFHTVGQALF*GEQVTR
Trigger: CCTGGTGACCTGCTCTCCCAAGAACAGAGCCTGTCC...CACGGTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCATAAAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR CAA 90 bp AGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTGAAACCCACACTCCACACCTaGAACCAGCTGATGCCCCTC +
Preference number: 5 (lower is better)
Translates to: STQARSLGPALEESRLLKPTLHT*NQLMPL
Trigger: GAGGGGCATCAGCTGGTTCAAGGTGTGGAGTGTGGG...TTTCAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426130.6
CDS-3UTR CAA 90 bp AGCGGTCAGCTCCTCAGCAGAAGCTGCGTGGGCCGCCACTCCCCCTTTCTGCAACACAGGGTGTATCTTTaGAAGACCCTATTCCCTCCT +
Preference number: 5 (lower is better)
Translates to: SGQLLSRSCVGRHSPFLQHRVYL*KTLFPP
Trigger: AGGAGGGAATAGGGTCTTCAAAAGATACACCCTGTG...TTGCAGAAAGGGGGAGTGGCGGCCCACGCAGCTTCTGCTGAGGAGCTGACCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR CAA 90 bp GGCAGGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCAAAATCTCTCCTCCCTaGGGTGAGTCCTGTGATCAC +
Preference number: 5 (lower is better)
Translates to: GRPAPRQEVWAQHWKKVAKISPP*GESCDH
Trigger: GTGATCACAGGACTCACCCAAGGGAGGAGAGATTTT...GGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS TCA 90 bp AAAGTTAGCAGAGAGGGCTCTGGCAGGCGAAGAGGAAGACAGTGGTaGTGCCCAGCCAGCTGTGAAGGGAGTAGAGGTTGGCAGTCCTTC +
Preference number: 5 (lower is better)
Translates to: KVSREGSGRRRGRQW*CPASCEGSRGWQSF
Trigger: GAAGGACTGCCAACCTCTACTCCCTTCACAGCTGGCTGGGCATCACCACTGTCTTCCTCTTCGCCTGCCAGAGCCCTCTCTGCTAACTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535177.1
CDS CCA 90 bp AGCATCCCGGTGCTGTTGGCAAAGACCGCCTCACTGGGCAGGCTGTaGTATGGCCTGGTGGTGTTTTTCCACCTCCATAGAATACCACCA +
Preference number: 5 (lower is better)
Translates to: SIPVLLAKTASLGRL*YGLVVFFHLHRIPP
Trigger: TGGTGGTATTCTATGGAGGTGGAAAAACACCACCAGGCCATACCACAGCCTGCCCAGTGAGGCGGTCTTTGCCAACAGCACCGGGATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539890.1
CDS-3UTR CAA 90 bp AGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGGTGGAGCATCCCGGTGCTGTaGGCAAAGACCGCCTCACTG +
Preference number: 5 (lower is better)
Translates to: RRSILALLPTSGNVRLGWSIPVL*AKTASL
Trigger: CAGTGAGGCGGTCTTTGCCAACAGCACCGGGATGCT...CCACCCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR CAA 90 bp GCACACCTTTATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCACCGTGGACTGCACTaGAGTCCCAGCTCTTCACCA +
Preference number: 5 (lower is better)
Translates to: AHLYGGSGRTPHLPHVSHHRGLH*SPSSSP
Trigger: TGGTGAAGAGCTGGGACTCAAGTGCAGTCCACGGTG...GTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCATAAAGGTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CAA 90 bp AAGCCCTTCCTTGGGGAAGAAGATAAGGCCACACTTCACCCCACAGAACCACAGTGTAGGCCCAGCTACTaGGGAGGCAGAGGCAGGAGA +
Preference number: 5 (lower is better)
Translates to: KPFLGEEDKATLHPTEPQCRPSY*GGRGRR
Trigger: TCTCCTGCCTCTGCCTCCCAAGTAGCTGGGCCTACA...CTGTGGTTCTGTGGGGTGAAGTGTGGCCTTATCTTCTTCCCCAAGGAAGGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR CAA 90 bp TGGACTGCACTTGAGTCCCAGCTCTTCACCACATCCCTAGGAGTCTTAAGAGGAAGCATCCCGGTGCTGTaGGCAAAGACCGCCTCACTG +
Preference number: 5 (lower is better)
Translates to: WTALESQLFTTSLGVLRGSIPVL*AKTASL
Trigger: CAGTGAGGCGGTCTTTGCCAACAGCACCGGGATGCT...TCCTCTTAAGACTCCTAGGGATGTGGTGAAGAGCTGGGACTCAAGTGCAGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CAA 90 bp AGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGGTGGAGTCTGGGCCCAGCATaGGAAGAAAGTCGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: RRSILALLPTSGNVRLGWSLGPA*EESRLL
Trigger: CAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACT...CCACCCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR CAA 90 bp GTCAAGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGGGACAGGCTCTGTTCTaGGGAGAGCAGGTCACCAGG +
Preference number: 5 (lower is better)
Translates to: VKTVNISPSANIWQCEAGGQALF*GEQVTR
Trigger: CCTGGTGACCTGCTCTCCCAAGAACAGAGCCTGTCC...CCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR CAA 90 bp GTCAAGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGGCACAGAACGCTAGGTaGGGCCAGGCAAGCAGCCAT +
Preference number: 5 (lower is better)
Translates to: VKTVNISPSANIWQCEAGAQNAR*GQASSH
Trigger: ATGGCTGCTTGCCTGGCCCAACCTAGCGTTCTGTGC...CCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR CAA 90 bp TCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGGTGGACGTTGGCACAGAACGCTAGGTaGGGCCAGGCAAGCAGCCAT +
Preference number: 5 (lower is better)
Translates to: SILALLPTSGNVRLGWTLAQNAR*GQASSH
Trigger: ATGGCTGCTTGCCTGGCCCAACCTAGCGTTCTGTGC...CAACGTCCACCCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR CAA 90 bp AGAGCTTCTGAGGGGAGCACAGGCTGCACCACCAGGAGCTCTTGGGAGCCCCTTAATCTGTTCCCTCAATaGAAAATGGCAATGACGGCC +
Preference number: 5 (lower is better)
Translates to: RASEGSTGCTTRSSWEPLNLFPQ*KMAMTA
Trigger: GGCCGTCATTGCCATTTTCAATTGAGGGAACAGATT...AAGGGGCTCCCAAGAGCTCCTGGTGGTGCAGCCTGTGCTCCCCTCAGAAGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR CAA 90 bp GGCAGGCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCGAAATGGGCACCTaGAGCAAATCACTTAACATT +
Preference number: 5 (lower is better)
Translates to: GRPAPRQEVWAQHWKKVACEMGT*SKSLNI
Trigger: AATGTTAAGTGATTTGCTCAAGGTGCCCATTTCGCA...GGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CAA 90 bp TCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTGAAACCAGCCGGGAGCCCTGGTGCGAAATGGGCACCTaGAGCAAATCACTTAACATT +
Preference number: 5 (lower is better)
Translates to: SGPSIGRKSPAETSREPWCEMGT*SKSLNI
Trigger: AATGTTAAGTGATTTGCTCAAGGTGCCCATTTCGCA...CCAGGGCTCCCGGCTGGTTTCAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CAA 90 bp CATCCCGGTGCTGTTGGCAAAGACCGCCTCACTGGGCAGGCTGTGGTATGGCCTTGCGAAATGGGCACCTaGAGCAAATCACTTAACATT +
Preference number: 5 (lower is better)
Translates to: HPGAVGKDRLTGQAVVWPCEMGT*SKSLNI
Trigger: AATGTTAAGTGATTTGCTCAAGGTGCCCATTTCGCA...AGGCCATACCACAGCCTGCCCAGTGAGGCGGTCTTTGCCAACAGCACCGGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540755.5
ENST00000546151.5
CDS-3UTR CAA 90 bp GTCAAGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGAGTCTGGGCCCAGCATaGGAAGAAAGTCGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: VKTVNISPSANIWQCEAGSLGPA*EESRLL
Trigger: CAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACT...CCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR CAA 90 bp AAGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGGTGCACCGTGGACTGCACTaGAGTCCCAGCTCTTCACCA +
Preference number: 5 (lower is better)
Translates to: KTVNISPSANIWQCEAGVHRGLH*SPSSSP
Trigger: TGGTGAAGAGCTGGGACTCAAGTGCAGTCCACGGTG...CACCCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS-3UTR CAA 90 bp GCACACCTTTATGGGGGAAGTGGACGGACACCTCACCTCCCTCATGTTTCACACCCCCAGGCTTCTCACTaGCTTACTAAGCACAGCAGT +
Preference number: 5 (lower is better)
Translates to: AHLYGGSGRTPHLPHVSHPQASH*LTKHSS
Trigger: ACTGCTGTGCTTAGTAAGCAAGTGAGAAGCCTGGGG...GTGTGAAACATGAGGGAGGTGAGGTGTCCGTCCACTTCCCCCATAAAGGTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294072.9
ENST00000426130.6
CDS CCA 90 bp GCCAGCACCTCCATAGAATACCACCATGCCAGCAACCATAAGCACTaGGTGCCAGTTGAACATGTAGATGCTGCCATTCCAGGCAAAGCC +
Preference number: 5 (lower is better)
Translates to: ASTSIEYHHASNHKH*VPVEHVDAAIPGKA
Trigger: GGCTTTGCCTGGAATGGCAGCATCTACATGTTCAACTGGCACCCAGTGCTTATGGTTGCTGGCATGGTGGTATTCTATGGAGGTGCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR CAA 90 bp GCCAGCACCCAGGCAAGAAGTCTGGGCCCAGCATTGGAAGAAAGTCGCCTGCTGTGCGAAATGGGCACCTaGAGCAAATCACTTAACATT +
Preference number: 5 (lower is better)
Translates to: ASTQARSLGPALEESRLLCEMGT*SKSLNI
Trigger: AATGTTAAGTGATTTGCTCAAGGTGCCCATTTCGCA...CAGCAGGCGACTTTCTTCCAATGCTGGGCCCAGACTTCTTGCCTGGGTGCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000540755.5
ENST00000544118.5
ENST00000546151.5
CDS-3UTR CAA 90 bp GTCAAGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGGCTGGGGACATCCCAGTGGCTTaGAAGGCTCCAGCCAGTCAA +
Preference number: 5 (lower is better)
Translates to: VKTVNISPSANIWQCEAGDIPVA*KAPASQ
Trigger: TTGACTGGCTGGAGCCTTCAAAGCCACTGGGATGTC...CCCAGCCTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS CCA 90 bp TCCGTCACCTCCATAGAATACCACCATGCCAGCAACCATAAGCACTaGGTGCCAGTTGAACATGTAGATGCTGCCATTCCAGGCAAAGCC +
Preference number: 5 (lower is better)
Translates to: SVTSIEYHHASNHKH*VPVEHVDAAIPGKA
Trigger: GGCTTTGCCTGGAATGGCAGCATCTACATGTTCAACTGGCACCCAGTGCTTATGGTTGCTGGCATGGTGGTATTCTATGGAGGTGACGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538263.5
CDS CCA 90 bp CTCACCACCTCCATAGAATACCACCATGCCAGCAACCATAAGCACTaGGTGCCAGTTGAACATGTAGATGCTGCCATTCCAGGCAAAGCC +
Preference number: 5 (lower is better)
Translates to: LTTSIEYHHASNHKH*VPVEHVDAAIPGKA
Trigger: GGCTTTGCCTGGAATGGCAGCATCTACATGTTCAACTGGCACCCAGTGCTTATGGTTGCTGGCATGGTGGTATTCTATGGAGGTGGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536687.1
ENST00000542411.5
CDS CCA 90 bp ATCCTACACAGCTTCCCAGCAAGGGAACAGGAAATGCTAGGGCACTaGTATCAACTCCTCGGCATCTTCTACCCTCCCATGATTTGTGGG +
Preference number: 5 (lower is better)
Translates to: ILHSFPAREQEMLGH*YQLLGIFYPPMICG
Trigger: CCCACAAATCATGGGAGGGTAGAAGATGCCGAGGAGTTGATACCAGTGCCCTAGCATTTCCTGTTCCCTTGCTGGGAAGCTGTGTAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540139.5
CDS CCA 90 bp ATGGCCACCTCCATAGAATACCACCATGCCAGCAACCATAAGCACTaGGTGCCAGTTGAACATGTAGATGCTGCCATTCCAGGCAAAGCC +
Preference number: 5 (lower is better)
Translates to: MATSIEYHHASNHKH*VPVEHVDAAIPGKA
Trigger: GGCTTTGCCTGGAATGGCAGCATCTACATGTTCAACTGGCACCCAGTGCTTATGGTTGCTGGCATGGTGGTATTCTATGGAGGTGGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544118.5
CDS TCA 90 bp CTCAGAGAACTGGCCTGGGCTCCAATTCCTGCGAAATGGGCACCTTaGGCAAATCACTTAACATTTGCAGGACTCACCCCTAACCACAGT +
Preference number: 5 (lower is better)
Translates to: LRELAWAPIPAKWAP*ANHLTFAGLTPNHS
Trigger: ACTGTGGTTAGGGGTGAGTCCTGCAAATGTTAAGTGATTTGCTCAAGGTGCCCATTTCGCAGGAATTGGAGCCCAGGCCAGTTCTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
ENST00000535152.1
ENST00000537680.5
ENST00000538263.5
ENST00000539128.5
ENST00000540755.5
ENST00000542411.5
ENST00000544118.5
ENST00000546151.5
CDS TCA 90 bp CTCAGAGAACTGGCCTGGGCTCCAATTCCTGCGAAATGGGCACCTTaGGCAAATCACTTAACATTTGCAGGACTCACCTGCAAGAAAGGC +
Preference number: 5 (lower is better)
Translates to: LRELAWAPIPAKWAP*ANHLTFAGLTCKKG
Trigger: GCCTTTCTTGCAGGTGAGTCCTGCAAATGTTAAGTGATTTGCTCAAGGTGCCCATTTCGCAGGAATTGGAGCCCAGGCCAGTTCTCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537364.5
CDS CCA 90 bp AACCACACCTCCATAGAATACCACCATGCCAGCAACCATAAGCACTaGGTGCCAGTTGAACATGTAGATGCTGCCATTCCAGGCAAAGCC +
Preference number: 5 (lower is better)
Translates to: NHTSIEYHHASNHKH*VPVEHVDAAIPGKA
Trigger: GGCTTTGCCTGGAATGGCAGCATCTACATGTTCAACTGGCACCCAGTGCTTATGGTTGCTGGCATGGTGGTATTCTATGGAGGTGTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540755.5
CDS-3UTR CAA 90 bp AGAAAGATCAATTCTGTTACCTTCCAGATCAGGAGTGGACCCAACCCCAAAATCAGCATCCCGGTGCTGTaGGCAAAGACCGCCTCACTG +
Preference number: 5 (lower is better)
Translates to: RKINSVTFQIRSGPNPKISIPVL*AKTASL
Trigger: CAGTGAGGCGGTCTTTGCCAACAGCACCGGGATGCT...GATTTTGGGGTTGGGTCCACTCCTGATCTGGAAGGTAACAGAATTGATCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS-3UTR CAA 90 bp CAGCCAGTCAAGACGGTCAATATTAGCCCTTCTGCCAACATCTGGCAATGTGAGCCCCAGGCTTCTCACTaGCTTACTAAGCACAGCAGT +
Preference number: 5 (lower is better)
Translates to: QPVKTVNISPSANIWQCEPQASH*LTKHSS
Trigger: ACTGCTGTGCTTAGTAAGCAAGTGAGAAGCCTGGGG...CTCACATTGCCAGATGTTGGCAGAAGGGCTAATATTGACCGTCTTGACTGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS-3UTR CAA 90 bp CCTCGTGTGAATGGAGGACCTGAGAGGCTGACGCCAAGGAGTGCAGAAGCCAAAAGTCCCTGCAAATATTaGTATAATGAGCCAGGTGCA +
Preference number: 5 (lower is better)
Translates to: PRVNGGPERLTPRSAEAKSPCKY*YNEPGA
Trigger: TGCACCTGGCTCATTATACAAATATTTGCAGGGACT...TTTGGCTTCTGCACTCCTTGGCGTCAGCCTCTCAGGTCCTCCATTCACACGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS CCA 90 bp TTTTCCACCTCCATAGAATACCACCATGCCAGCAACCATAAGCACTaGGTGCCAGTTGAACATGTAGATGCTGCCATTCCAGGCAAAGCC +
Preference number: 5 (lower is better)
Translates to: FSTSIEYHHASNHKH*VPVEHVDAAIPGKA
Trigger: GGCTTTGCCTGGAATGGCAGCATCTACATGTTCAACTGGCACCCAGTGCTTATGGTTGCTGGCATGGTGGTATTCTATGGAGGTGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539890.1
CDS CCA 90 bp CCTTCCCACCTGGCATTGCCCACTACCGTGCTAGCTTCCTCATTGTaGCCTATTACCCAAGCAACAAGAACAGTAAATGACATGCTTAGC +
Preference number: 5 (lower is better)
Translates to: PSHLALPTTVLASSL*PITQATRTVNDMLS
Trigger: GCTAAGCATGTCATTTACTGTTCTTGTTGCTTGGGTAATAGGCCACAATGAGGAAGCTAGCACGGTAGTGGGCAATGCCAGGTGGGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535177.1
CDS GCA 90 bp CAGCCTCCTAGAAGATTTGTGACTCAACTACTTAACTCAGAGATTTaGTACCCAGCCTCAGAACTGCCTCCTCAATTCCTCCAAGGGCAG +
Preference number: 5 (lower is better)
Translates to: QPPRRFVTQLLNSEI*YPASELPPQFLQGQ
Trigger: CTGCCCTTGGAGGAATTGAGGAGGCAGTTCTGAGGCTGGGTAGCAAATCTCTGAGTTAAGTAGTTGAGTCACAAATCTTCTAGGAGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537364.5
CDS CCA 90 bp ATGCAAATGCTTGAAAATATCCTCTCATTTGTTCTAAGGGCAGGCTaGGCTGTGATCCCAGGGTGTGCTCACTTTGCAGAGCCCCATTCT +
Preference number: 5 (lower is better)
Translates to: MQMLENILSFVLRAG*AVIPGCAHFAEPHS
Trigger: AGAATGGGGCTCTGCAAAGTGAGCACACCCTGGGATCACAGCCCAGCCTGCCCTTAGAACAAATGAGAGGATATTTTCAAGCATTTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537364.5
CDS-3UTR CAA 90 bp TCTCACTTGCTTACTAAGCACAGCAGTCTGAAGCTTGGGACCTGGCAGTGCGTCTGCGAAATGGGCACCTaGAGCAAATCACTTAACATT +
Preference number: 5 (lower is better)
Translates to: SHLLTKHSSLKLGTWQCVCEMGT*SKSLNI
Trigger: AATGTTAAGTGATTTGCTCAAGGTGCCCATTTCGCA...GACGCACTGCCAGGTCCCAAGCTTCAGACTGCTGTGCTTAGTAAGCAAGTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
CDS GCA 90 bp GACAGACTTAGAATAGACCCTGGGCACACTTTCCTGACAGAGAGCTaGAAAGTTATATTGCCCTGCTCACAATACACAGATAAGCCCTCC +
Preference number: 5 (lower is better)
Translates to: DRLRIDPGHTFLTES*KVILPCSQYTDKPS
Trigger: GGAGGGCTTATCTGTGTATTGTGAGCAGGGCAATATAACTTTGCAGCTCTCTGTCAGGAAAGTGTGCCCAGGGTCTATTCTAAGTCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537364.5
CDS GCA 90 bp GGGCTGCAGGGAAAAAGCTTCCATGAAGCTGGCAGGAGAAAATCATaGCACCAGCCTCCTAGAAGATTTGTGACTCAACTACTTAACTCA +
Preference number: 5 (lower is better)
Translates to: GLQGKSFHEAGRRKS*HQPPRRFVTQLLNS
Trigger: TGAGTTAAGTAGTTGAGTCACAAATCTTCTAGGAGGCTGGTGGCATGATTTTCTCCTGCCAGCTTCATGGAAGCTTTTTCCCTGCAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537364.5
CDS TCA 90 bp ATTTGCAGGACTCACCTGCAAGAAAGGCGTGGCAGTAAGAATACTTaGACAGTAAGAATAACGAACACCAGCTACGAGCACCAGAGCCTT +
Preference number: 5 (lower is better)
Translates to: ICRTHLQERRGSKNT*TVRITNTSYEHQSL
Trigger: AAGGCTCTGGTGCTCGTAGCTGGTGTTCGTTATTCTTACTGTTCAAGTATTCTTACTGCCACGCCTTTCTTGCAGGTGAGTCCTGCAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537364.5
CDS GCA 90 bp TGTAGAGCACATGGTCTGTCACAACTATGTCATCAACTCTGCCCATaGAAGAGCAGCCACATAAACATCTTAACAAATGAGCACCACGGC +
Preference number: 5 (lower is better)
Translates to: CRAHGLSQLCHQLCP*KSSHINILTNEHHG
Trigger: GCCGTGGTGCTCATTTGTTAAGATGTTTATGTGGCTGCTCTTGCATGGGCAGAGTTGATGACATAGTTGTGACAGACCATGTGCTCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537364.5
CDS GCA 90 bp AGGCTTTGTAGAGCACATGGTCTGTCACAACTATGTCATCAACTCTaGCCATGCAAGAGCAGCCACATAAACATCTTAACAAATGAGCAC +
Preference number: 5 (lower is better)
Translates to: RLCRAHGLSQLCHQL*PCKSSHINILTNEH
Trigger: GTGCTCATTTGTTAAGATGTTTATGTGGCTGCTCTTGCATGGGCAGAGTTGATGACATAGTTGTGACAGACCATGTGCTCTACAAAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537364.5
CDS CCA 90 bp CTTGCTCATAAAACTCTTCACTCGCACAGGCCTGAGATCAGAATATaGAAACCACTTCAAGAATTCTTTTGGTTCACAGAGGTGGGAGTG +
Preference number: 5 (lower is better)
Translates to: LAHKTLHSHRPEIRI*KPLQEFFWFTEVGV
Trigger: CACTCCCACCTCTGTGAACCAAAAGAATTCTTGAAGTGGTTTCCATATTCTGATCTCAGGCCTGTGCGAGTGAAGAGTTTTATGAGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535177.1
CDS TCA 90 bp TTATATTGCCCTGCTCACAATACACAGATAAGCCCTCCTACTTCCTaGAATAGAGCAAAGCAGGAGAAAAGGAAGAATGCAGTGAAGGAC +
Preference number: 5 (lower is better)
Translates to: LYCPAHNTQISPPTS*NRAKQEKRKNAVKD
Trigger: GTCCTTCACTGCATTCTTCCTTTTCTCCTGCTTTGCTCTATTTCAGGAAGTAGGAGGGCTTATCTGTGTATTGTGAGCAGGGCAATATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537364.5
CDS-3UTR CAA 90 bp CTGAAGAAAAGCTTCTCATTAATGCCCGAAATGACGGATGCGATGGACAGAGAGAATGATGTAGGGTGGTaGACAGGATTAAATGTAAGG +
Preference number: 5 (lower is better)
Translates to: LKKSFSLMPEMTDAMDRENDVGW*TGLNVR
Trigger: CCTTACATTTAATCCTGTCAACCACCCTACATCATT...CTCTCTGTCCATCGCATCCGTCATTTCGGGCATTAATGAGAAGCTTTTCTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS TCA 90 bp TTTCAGATCACCAGATATTCACCTAAAACACTCTCCATCCCTCAGTaGAATGTAAGAGATCTTGATCAGCAGGCTCACTCATCTGACAAT +
Preference number: 5 (lower is better)
Translates to: FQITRYSPKTLSIPQ*NVRDLDQQAHSSDN
Trigger: ATTGTCAGATGAGTGAGCCTGCTGATCAAGATCTCTTACATTTCACTGAGGGATGGAGAGTGTTTTAGGTGAATATCTGGTGATCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537364.5
CDS TCA 72 bp CAGCACTTCCAGTCGCGCGCGAGGCCTCCTGGGAAGTaGAGTCCGGAGACCAGGGGTGGCCGGCTCCCAGCG +
Preference number: 6 (lower is better)
Translates to: QHFQSRARPPGK*SPETRGGRLPA
Trigger: CGCTGGGAGCCGGCCACCCCTGGTCTCCGGACTTCACTTCCCAGGAGGCCTCGCGCGCGACTGGAAGTGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426130.6
ENST00000535152.1
ENST00000536687.1
CDS CCA 72 bp ACTACGAGCCGGCCCTCAGCAAGGCCGTGCGCAGTGTaGGCGGGAGCCCTAAGTCAGCTAGCGGCGACGCTG +
Preference number: 6 (lower is better)
Translates to: TTSRPSARPCAV*AGALSQLAATL
Trigger: CAGCGTCGCCGCTAGCTGACTTAGGGCTCCCGCCCACACTGCGCACGGCCTTGCTGAGGGCCGGCTCGTAGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426130.6
ENST00000535152.1
ENST00000536687.1
ENST00000537680.5
CDS TCA 72 bp GGGCCCCACCCACGACTGGGGCAGGCGGTACACCAGTaGCGCTGGGAGGTGGAGCTTGCAGTGAGCCGATAT +
Preference number: 6 (lower is better)
Translates to: GPHPRLGQAVHQ*RWEVELAVSRY
Trigger: ATATCGGCTCACTGCAAGCTCCACCTCCCAGCGTCACTGGTGTACCGCCTGCCCCAGTCGTGGGTGGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538263.5
CDS GCA 72 bp GGCGCCGGAGCTGCCGCTCCCGAGGTTCCTAGGAGATaGAGAAGACACTGCCCTGAATGCCTACAGCCGGCT +
Preference number: 6 (lower is better)
Translates to: GAGAAAPEVPRR*RRHCPECLQPA
Trigger: AGCCGGCTGTAGGCATTCAGGGCAGTGTCTTCTGCATCTCCTAGGAACCTCGGGAGCGGCAGCTCCGGCGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
ENST00000535152.1
ENST00000536687.1
ENST00000539128.5
ENST00000540317.5
ENST00000542411.5
ENST00000545361.5
ENST00000546151.5
CDS TCA 72 bp CTGATCACGCACTCCCCTAACCACAGTGGGACGAAGTaGGGCCGGGATCTCCGGAACCCGCCTCTCGCTACC +
Preference number: 6 (lower is better)
Translates to: LITHSPNHSGTK*GRDLRNPPLAT
Trigger: GGTAGCGAGAGGCGGGTTCCGGAGATCCCGGCCTCACTTCGTCCCACTGTGGTTAGGGGAGTGCGTGATCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536687.1
CDS TCA 72 bp TCTGTAGCCACACCCCCTAACCACAGTGGGACGAAGTaGGGCCGGGATCTCCGGAACCCGCCTCTCGCTACC +
Preference number: 6 (lower is better)
Translates to: SVATPPNHSGTK*GRDLRNPPLAT
Trigger: GGTAGCGAGAGGCGGGTTCCGGAGATCCCGGCCTCACTTCGTCCCACTGTGGTTAGGGGGTGTGGCTACAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545361.5
CDS GCA 72 bp GCCGCTCCCGAGGTTCCTAGGAGATGCAGAAGACACTaGCCTGAATGCCTACAGCCGGCTGGCAATGCCGCC +
Preference number: 6 (lower is better)
Translates to: AAPEVPRRCRRH*PECLQPAGNAA
Trigger: GGCGGCATTGCCAGCCGGCTGTAGGCATTCAGGGCAGTGTCTTCTGCATCTCCTAGGAACCTCGGGAGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
ENST00000535152.1
ENST00000536687.1
ENST00000539128.5
ENST00000540317.5
ENST00000542411.5
ENST00000545361.5
ENST00000546151.5
CDS TCA 72 bp TTTGCAGGACTCACCCCTAACCACAGTGGGACGAAGTaGGGCCGGGATCTCCGGAACCCGCCTCTCGCTACC +
Preference number: 6 (lower is better)
Translates to: FAGLTPNHSGTK*GRDLRNPPLAT
Trigger: GGTAGCGAGAGGCGGGTTCCGGAGATCCCGGCCTCACTTCGTCCCACTGTGGTTAGGGGTGAGTCCTGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
ENST00000535152.1
ENST00000537680.5
ENST00000538263.5
ENST00000539128.5
ENST00000540755.5
ENST00000542411.5
ENST00000544118.5
ENST00000546151.5
CDS TCA 72 bp CTCATCCCCCATCCAGAGGAGGCGGAAATGTTCAGGTaGACGCGAAGCCTCCCACTACGAGCCGGCCCTCAG +
Preference number: 6 (lower is better)
Translates to: LIPHPEEAEMFR*TRSLPLRAGPQ
Trigger: CTGAGGGCCGGCTCGTAGTGGGAGGCTTCGCGTTCACCTGAACATTTCCGCCTCCTCTGGATGGGGGATGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000426130.6
ENST00000535152.1
ENST00000536687.1
ENST00000537680.5
CDS GCA 72 bp CTCCAAGTCCGAAGTCAGGGTCCAGGACTGCTGCGATaGATCAGCCCCGCCTCTCATCCCCCATCCAGAGGA +
Preference number: 6 (lower is better)
Translates to: LQVRSQGPGLLR*ISPASHPPSRG
Trigger: TCCTCTGGATGGGGGATGAGAGGCGGGGCTGATGCATCGCAGCAGTCCTGGACCCTGACTTCGGACTTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426130.6
ENST00000535152.1
ENST00000536687.1
ENST00000537680.5
CDS CCA 72 bp ACAGTGAGGACGAAGGCCATCAGGTGCAGCGCTGCATaGAGGAGTTTCCAGGGCAGTTTGGGCCCCACCCAC +
Preference number: 6 (lower is better)
Translates to: TVRTKAIRCSAA*RSFQGSLGPTH
Trigger: GTGGGTGGGGCCCAAACTGCCCTGGAAACTCCTCCATGCAGCGCTGCACCTGATGGCCTTCGTCCTCACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
ENST00000535177.1
ENST00000536915.5
ENST00000537364.5
ENST00000538263.5
ENST00000539128.5
ENST00000540139.5
ENST00000540317.5
ENST00000542361.5
CDS GCA 72 bp CACAACAGTGAGGACGAAGGCCATCAGGTGCAGCGCTaGATGGAGGAGTTTCCAGGGCAGTTTGGGCCCCAC +
Preference number: 6 (lower is better)
Translates to: HNSEDEGHQVQR*MEEFPGQFGPH
Trigger: GTGGGGCCCAAACTGCCCTGGAAACTCCTCCATGCAGCGCTGCACCTGATGGCCTTCGTCCTCACTGTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
ENST00000535177.1
ENST00000536915.5
ENST00000537364.5
ENST00000538263.5
ENST00000539128.5
ENST00000540139.5
ENST00000540317.5
ENST00000542361.5
CDS GCA 72 bp GAGGTTCCTAGGAGATGCAGAAGACACTGCCCTGAATaGCTACAGCCGGCTGGCAATGCCGCCCCAGAGCAG +
Preference number: 6 (lower is better)
Translates to: EVPRRCRRHCPE*LQPAGNAAPEQ
Trigger: CTGCTCTGGGGCGGCATTGCCAGCCGGCTGTAGGCATTCAGGGCAGTGTCTTCTGCATCTCCTAGGAACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000426130.6
ENST00000447532.6
ENST00000535152.1
ENST00000536687.1
ENST00000539128.5
ENST00000540317.5
ENST00000546151.5
CDS GCA 72 bp ACCAGCCCCACAACAGTGAGGACGAAGGCCATCAGGTaGAGCGCTGCATGGAGGAGTTTCCAGGGCAGTTTG +
Preference number: 6 (lower is better)
Translates to: TSPTTVRTKAIR*SAAWRSFQGSL
Trigger: CAAACTGCCCTGGAAACTCCTCCATGCAGCGCTGCACCTGATGGCCTTCGTCCTCACTGTTGTGGGGCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
ENST00000535177.1
ENST00000536915.5
ENST00000537364.5
ENST00000538263.5
ENST00000539128.5
ENST00000540139.5
ENST00000540317.5
ENST00000542361.5
CDS GCA 72 bp TTCTTCTCCAAGTCCGAAGTCAGGGTCCAGGACTGCTaGGATGCATCAGCCCCGCCTCTCATCCCCCATCCA +
Preference number: 6 (lower is better)
Translates to: FFSKSEVRVQDC*DASAPPLIPHP
Trigger: TGGATGGGGGATGAGAGGCGGGGCTGATGCATCGCAGCAGTCCTGGACCCTGACTTCGGACTTGGAGAAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426130.6
ENST00000535152.1
ENST00000536687.1
ENST00000537680.5
CDS GCA 72 bp CGTTTCTTCTCCAAGTCCGAAGTCAGGGTCCAGGACTaGTGCGATGCATCAGCCCCGCCTCTCATCCCCCAT +
Preference number: 6 (lower is better)
Translates to: RFFSKSEVRVQD*CDASAPPLIPH
Trigger: ATGGGGGATGAGAGGCGGGGCTGATGCATCGCAGCAGTCCTGGACCCTGACTTCGGACTTGGAGAAGAAACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000426130.6
ENST00000535152.1
ENST00000536687.1
ENST00000537680.5
CDS CCA 72 bp CCAGCATCCCGGTGCTGTTGGCAAAGACCGCCTCACTaGGCAGGCTGTGGTATGGCCACCTCCATAGAATAC +
Preference number: 6 (lower is better)
Translates to: PASRCCWQRPPH*AGCGMATSIEY
Trigger: GTATTCTATGGAGGTGGCCATACCACAGCCTGCCCAGTGAGGCGGTCTTTGCCAACAGCACCGGGATGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544118.5
CDS CAA 90 bp GCCCAACATTTACAAAGGCCAGCCTTGGAGAGGGAAAGTGCAGCTTaGTCCAGCCTGAGCCCTATCCCGCCTCCCTTCCTGACCTCTTAC +
Preference number: 6 (lower is better)
Translates to: AQHLQRPALERESAA*SSLSPIPPPFLTSY
Trigger: GTAAGAGGTCAGGAAGGGAGGCGGGATAGGGCTCAGGCTGGACAAAGCTGCACTTTCCCTCTCCAAGGCTGGCCTTTGTAAATGTTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542411.5
CDS TCA 72 bp GGACAAAAGGGAGGACACACCCGACTGTGCTATGTGTaGCCAAAGCACATCCCACCCCATCAGTGCCTCCTC +
Preference number: 6 (lower is better)
Translates to: GQKGGHTRLCYV*PKHIPPHQCLL
Trigger: GAGGAGGCACTGATGGGGTGGGATGTGCTTTGGTCACACATAGCACAGTCGGGTGTGTCCTCCCTTTTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535177.1
CDS TCA 72 bp CCAGGAACCACTGGCAGGCGAAGAGGAAGACAGTGGTaGTGCCCAGCCAGCACCTCCATAGAATACCACCAT +
Preference number: 6 (lower is better)
Translates to: PGTTGRRRGRQW*CPASTSIEYHH
Trigger: ATGGTGGTATTCTATGGAGGTGCTGGCTGGGCATCACCACTGTCTTCCTCTTCGCCTGCCAGTGGTTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546151.5
CDS GCA 72 bp CCAACATTTACAAAGGCCAGCCTTGGAGAGGGAAAGTaGAGCTTTGTCCAGCCTGAGCCCTATCCCGCCTCC +
Preference number: 6 (lower is better)
Translates to: PTFTKASLGEGK*SFVQPEPYPAS
Trigger: GGAGGCGGGATAGGGCTCAGGCTGGACAAAGCTGCACTTTCCCTCTCCAAGGCTGGCCTTTGTAAATGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542411.5
CDS CCA 72 bp GTGCTGTTGGCAAAGACCGCCTCACTGGGCAGGCTGTaGTATGGCCTGGTGGTGTTTTTCCACCTCCATAGA +
Preference number: 6 (lower is better)
Translates to: VLLAKTASLGRL*YGLVVFFHLHR
Trigger: TCTATGGAGGTGGAAAAACACCACCAGGCCATACCACAGCCTGCCCAGTGAGGCGGTCTTTGCCAACAGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539890.1
CDS CCA 72 bp GTGCTGTTGGCAAAGACCGCCTCACTGGGCAGGCTGTaGTATGGCCTGGTGGTGTTTTTCCTTAGAGTTGGG +
Preference number: 6 (lower is better)
Translates to: VLLAKTASLGRL*YGLVVFFLRVG
Trigger: CCCAACTCTAAGGAAAAACACCACCAGGCCATACCACAGCCTGCCCAGTGAGGCGGTCTTTGCCAACAGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540317.5
CDS TCA 72 bp GCAGGCAGGACAAGTAGAACCGTCCAGACACCATTCTaGTCACGCACTCCCCTAACCACAGTGGGACGAAGT +
Preference number: 6 (lower is better)
Translates to: AGRTSRTVQTPF*SRTPLTTVGRS
Trigger: ACTTCGTCCCACTGTGGTTAGGGGAGTGCGTGATCAGAATGGTGTCTGGACGGTTCTACTTGTCCTGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536687.1
CDS CCA 72 bp CAAAGACCGCCTCACTGGGCAGGCTGTGGTATGGCCTaGTGGTGTTTTTCCACCTCCATAGAATACCACCAT +
Preference number: 6 (lower is better)
Translates to: QRPPHWAGCGMA*WCFSTSIEYHH
Trigger: ATGGTGGTATTCTATGGAGGTGGAAAAACACCACCAGGCCATACCACAGCCTGCCCAGTGAGGCGGTCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539890.1
CDS CCA 72 bp AGCTTCCCAGCAAGGGAACAGGAAATGCTAGGGCACTaGTATCAACTCCTCGGCATCTTCTACCCTCCCATG +
Preference number: 6 (lower is better)
Translates to: SFPAREQEMLGH*YQLLGIFYPPM
Trigger: CATGGGAGGGTAGAAGATGCCGAGGAGTTGATACCAGTGCCCTAGCATTTCCTGTTCCCTTGCTGGGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540139.5
CDS CAA 72 bp ACTGGCCTGGGCTCCAATTCCTGCGAAATGGGCACCTaGAGCAAATCACTTAACATTTGCAGGACTCACCCC +
Preference number: 6 (lower is better)
Translates to: TGLGSNSCEMGT*SKSLNICRTHP
Trigger: GGGGTGAGTCCTGCAAATGTTAAGTGATTTGCTCAAGGTGCCCATTTCGCAGGAATTGGAGCCCAGGCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000294072.9
ENST00000426130.6
ENST00000447532.6
ENST00000535152.1
ENST00000537680.5
ENST00000538263.5
ENST00000539128.5
ENST00000540755.5
ENST00000542411.5
ENST00000544118.5
ENST00000546151.5
CDS CAA 90 bp TGCTCCCTGGCTCTTCTTTCACAACTCAAACCTTCCCACCTGGCATaGCCCACTACCGTGCTAGCTTCCTCATTGTGGCCTATTACCCAA +
Preference number: 6 (lower is better)
Translates to: CSLALLSQLKPSHLA*PTTVLASSLWPITQ
Trigger: TTGGGTAATAGGCCACAATGAGGAAGCTAGCACGGTAGTGGGCAATGCCAGGTGGGAAGGTTTGAGTTGTGAAAGAAGAGCCAGGGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535177.1
CDS CAA 90 bp GCTCAGAGAACTGGCCTGGGCTCCAATTCCTGCGAAATGGGCACCTaGAGCAAATCACTTAACATTTGCAGGACTCACCTGCAAGAAAGG +
Preference number: 6 (lower is better)
Translates to: AQRTGLGSNSCEMGT*SKSLNICRTHLQER
Trigger: CCTTTCTTGCAGGTGAGTCCTGCAAATGTTAAGTGATTTGCTCAAGGTGCCCATTTCGCAGGAATTGGAGCCCAGGCCAGTTCTCTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537364.5
CDS TCA 72 bp GCAGGCAGGACAAGTAGAACCGTCCAGACACCATTCTaGTCACGCACTCCTTTAGCCCTAATGATAGGCTCA +
Preference number: 6 (lower is better)
Translates to: AGRTSRTVQTPF*SRTPLALMIGS
Trigger: TGAGCCTATCATTAGGGCTAAAGGAGTGCGTGATCAGAATGGTGTCTGGACGGTTCTACTTGTCCTGCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000294072.9
ENST00000447532.6
ENST00000537364.5
ENST00000537680.5
ENST00000538263.5
ENST00000540755.5
ENST00000542411.5
ENST00000544118.5
ENST00000545361.5
ENST00000546151.5
CDS CAA 72 bp TCTCCCTCCCCGATGGACTGGGGGACTTCAAGAATCTaGAGGACCAGATTTAGGATACAAGCCCTAAACCCT +
Preference number: 6 (lower is better)
Translates to: SPSPMDWGTSRI*RTRFRIQALNP
Trigger: AGGGTTTAGGGCTTGTATCCTAAATCTGGTCCTCAAGATTCTTGAAGTCCCCCAGTCCATCGGGGAGGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537364.5
CDS CAA 72 bp ACTGGCCTGGGCTCCAATTCCTGCGAAATGGGCACCTaGAGCAAATCACTTAACATTTGCAGGACTCACCTG +
Preference number: 6 (lower is better)
Translates to: TGLGSNSCEMGT*SKSLNICRTHL
Trigger: CAGGTGAGTCCTGCAAATGTTAAGTGATTTGCTCAAGGTGCCCATTTCGCAGGAATTGGAGCCCAGGCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537364.5
CDS TCA 72 bp GCAGGCAGGACAAGTAGAACCGTCCAGACACCATTCTaGTCACGCACTCCTAGAAGAAGGAGAAGTCACAAA +
Preference number: 6 (lower is better)
Translates to: AGRTSRTVQTPF*SRTPRRRRSHK
Trigger: TTTGTGACTTCTCCTTCTTCTAGGAGTGCGTGATCAGAATGGTGTCTGGACGGTTCTACTTGTCCTGCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535177.1
ENST00000539890.1
CDS GCA 72 bp TACTTAACTCAGAGATTTGCTACCCAGCCTCAGAACTaGCTCCTCAATTCCTCCAAGGGCAGAGGACGTTTC +
Preference number: 6 (lower is better)
Translates to: YLTQRFATQPQN*LLNSSKGRGRF
Trigger: GAAACGTCCTCTGCCCTTGGAGGAATTGAGGAGGCAGTTCTGAGGCTGGGTAGCAAATCTCTGAGTTAAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537364.5
CDS CCA 72 bp CTTGAAAATATCCTCTCATTTGTTCTAAGGGCAGGCTaGGCTGTGATCCCAGGGTGTGCTCACTTTGCAGAG +
Preference number: 6 (lower is better)
Translates to: LENILSFVLRAG*AVIPGCAHFAE
Trigger: CTCTGCAAAGTGAGCACACCCTGGGATCACAGCCCAGCCTGCCCTTAGAACAAATGAGAGGATATTTTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537364.5
CDS CAA 72 bp ACTGGCCTGGGCTCCAATTCCTGCGAAATGGGCACCTaGAGCAAATCACTTAACATTTGCAGGACTCACCTA +
Preference number: 6 (lower is better)
Translates to: TGLGSNSCEMGT*SKSLNICRTHL
Trigger: TAGGTGAGTCCTGCAAATGTTAAGTGATTTGCTCAAGGTGCCCATTTCGCAGGAATTGGAGCCCAGGCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545361.5
CDS CAA 90 bp GTTTGTTGCTCTCCCTCCCCGATGGACTGGGGGACTTCAAGAATCTaGAGGACCAGATTTAGGATACAAGCCCTAAACCCTCATCTTACA +
Preference number: 6 (lower is better)
Translates to: VCCSPSPMDWGTSRI*RTRFRIQALNPHLT
Trigger: TGTAAGATGAGGGTTTAGGGCTTGTATCCTAAATCTGGTCCTCAAGATTCTTGAAGTCCCCCAGTCCATCGGGGAGGGAGAGCAACAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537364.5
CDS CAA 90 bp GCTCAGAGAACTGGCCTGGGCTCCAATTCCTGCGAAATGGGCACCTaGAGCAAATCACTTAACATTTGCAGGACTCACCTAAAACACTCT +
Preference number: 6 (lower is better)
Translates to: AQRTGLGSNSCEMGT*SKSLNICRTHLKHS
Trigger: AGAGTGTTTTAGGTGAGTCCTGCAAATGTTAAGTGATTTGCTCAAGGTGCCCATTTCGCAGGAATTGGAGCCCAGGCCAGTTCTCTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545361.5
CDS CAA 72 bp CACCTGGCATTGCCCACTACCGTGCTAGCTTCCTCATaGTGGCCTATTACCCAAGCAACAAGAACAGTAAAT +
Preference number: 6 (lower is better)
Translates to: HLALPTTVLASS*WPITQATRTVN
Trigger: ATTTACTGTTCTTGTTGCTTGGGTAATAGGCCACAATGAGGAAGCTAGCACGGTAGTGGGCAATGCCAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535177.1
CDS CAA 90 bp AAACCTTCCCACCTGGCATTGCCCACTACCGTGCTAGCTTCCTCATaGTGGCCTATTACCCAAGCAACAAGAACAGTAAATGACATGCTT +
Preference number: 6 (lower is better)
Translates to: KPSHLALPTTVLASS*WPITQATRTVNDML
Trigger: AAGCATGTCATTTACTGTTCTTGTTGCTTGGGTAATAGGCCACAATGAGGAAGCTAGCACGGTAGTGGGCAATGCCAGGTGGGAAGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535177.1
CDS TCA 72 bp ACTCACCTGCAAGAAAGGCGTGGCAGTAAGAATACTTaGACAGTAAGAATAACGAACACCAGCTACGAGCAC +
Preference number: 6 (lower is better)
Translates to: THLQERRGSKNT*TVRITNTSYEH
Trigger: GTGCTCGTAGCTGGTGTTCGTTATTCTTACTGTTCAAGTATTCTTACTGCCACGCCTTTCTTGCAGGTGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537364.5
CDS GCA 72 bp ACTTTCCTGACAGAGAGCTGCAAAGTTATATTGCCCTaGTCACAATACACAGATAAGCCCTCCTACTTCCTG +
Preference number: 6 (lower is better)
Translates to: TFLTESCKVILP*SQYTDKPSYFL
Trigger: CAGGAAGTAGGAGGGCTTATCTGTGTATTGTGAGCAGGGCAATATAACTTTGCAGCTCTCTGTCAGGAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537364.5
CDS GCA 72 bp AGAATAGACCCTGGGCACACTTTCCTGACAGAGAGCTaGAAAGTTATATTGCCCTGCTCACAATACACAGAT +
Preference number: 6 (lower is better)
Translates to: RIDPGHTFLTES*KVILPCSQYTD
Trigger: ATCTGTGTATTGTGAGCAGGGCAATATAACTTTGCAGCTCTCTGTCAGGAAAGTGTGCCCAGGGTCTATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537364.5
CDS GCA 72 bp AGAGCACATGGTCTGTCACAACTATGTCATCAACTCTaGCCATGCAAGAGCAGCCACATAAACATCTTAACA +
Preference number: 6 (lower is better)
Translates to: RAHGLSQLCHQL*PCKSSHINILT
Trigger: TGTTAAGATGTTTATGTGGCTGCTCTTGCATGGGCAGAGTTGATGACATAGTTGTGACAGACCATGTGCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537364.5
CDS TCA 72 bp ACCAGATATTCACCTAAAACACTCTCCATCCCTCAGTaGAATGTAAGAGATCTTGATCAGCAGGCTCACTCA +
Preference number: 6 (lower is better)
Translates to: TRYSPKTLSIPQ*NVRDLDQQAHS
Trigger: TGAGTGAGCCTGCTGATCAAGATCTCTTACATTTCACTGAGGGATGGAGAGTGTTTTAGGTGAATATCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537364.5
CDS GCA 72 bp CATGGTCTGTCACAACTATGTCATCAACTCTGCCCATaGAAGAGCAGCCACATAAACATCTTAACAAATGAG +
Preference number: 6 (lower is better)
Translates to: HGLSQLCHQLCP*KSSHINILTNE
Trigger: CTCATTTGTTAAGATGTTTATGTGGCTGCTCTTGCATGGGCAGAGTTGATGACATAGTTGTGACAGACCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537364.5
CDS CCA 72 bp AAAACTCTTCACTCGCACAGGCCTGAGATCAGAATATaGAAACCACTTCAAGAATTCTTTTGGTTCACAGAG +
Preference number: 6 (lower is better)
Translates to: KTLHSHRPEIRI*KPLQEFFWFTE
Trigger: CTCTGTGAACCAAAAGAATTCTTGAAGTGGTTTCCATATTCTGATCTCAGGCCTGTGCGAGTGAAGAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535177.1
CDS TCA 72 bp CCCATGCAAGAGCAGCCACATAAACATCTTAACAAATaGGCACCACGGCTGTGTTCCAGTAATATTTATTTA +
Preference number: 6 (lower is better)
Translates to: PMQEQPHKHLNK*APRLCSSNIYL
Trigger: TAAATAAATATTACTGGAACACAGCCGTGGTGCTCATTTGTTAAGATGTTTATGTGGCTGCTCTTGCATGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537364.5