RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CXORF38 (Homo sapiens)

Ensembl gene IDs: ENSG00000185753

Ensembl transcript IDs: ENST00000327877.10, ENST00000378421.1, ENST00000378426.5

Found 352 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCGGGGAAAGGCGAAAGTGAGGCCGACTCCACGGACCACTGCCTATaGTGGGGCAGTCATTGCGCAGTTTGGGAAACCAGCAGGAGGAAC +
Preference number: 1 (lower is better)
Translates to: AGKGESEADSTDHCL*WGSHCAVWETSRRN
Trigger: GTTCCTCCTGCTGGTTTCCCAAACTGCGCAATGACTGCCCCATCATAGGCAGTGGTCCGTGGAGTCGGCCTCACTTTCGCCTTTCCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR GCA 90 bp AAGTGTACCATAAACCAGCTGCCAAGCGAGAAGCTCCCCTGCTCCTaGCTGACATCCCCGCTTGTAATGCTGGCCTGGGTCCTGCCTGTC +
Preference number: 1 (lower is better)
Translates to: KCTINQLPSEKLPCS*LTSPLVMLAWVLPV
Trigger: GACAGGCAGGACCCAGGCCAGCATTACAAGCGGGGATGTCAGGCAGGAGCAGGGGAGCTTCTCGCTTGGCAGCTGGTTTATGGTACACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR CCA 90 bp CAGATGACATCCTTGGTGGGCGGCTGGATAGGCACACATCTTCACTaGGCTTGGAATGGAGCCTTTCCTGCAGGCAGTGAGGAACATGGC +
Preference number: 1 (lower is better)
Translates to: QMTSLVGGWIGTHLH*AWNGAFPAGSEEHG
Trigger: GCCATGTTCCTCACTGCCTGCAGGAAAGGCTCCATTCCAAGCCCAGTGAAGATGTGTGCCTATCCAGCCGCCCACCAAGGATGTCATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR CCA 90 bp CCCTGCCCTCCACCCATTCTACAGATGACATCCTTGGTGGGCGGCTaGATAGGCACACATCTTCACTGGGCTTGGAATGGAGCCTTTCCT +
Preference number: 1 (lower is better)
Translates to: PCPPPILQMTSLVGG*IGTHLHWAWNGAFP
Trigger: AGGAAAGGCTCCATTCCAAGCCCAGTGAAGATGTGTGCCTATCCAGCCGCCCACCAAGGATGTCATCTGTAGAATGGGTGGAGGGCAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR CCA 90 bp CTGAAGGTCCACAGGCAACTTGACCCAGTTAAGTACCACTGGCCTTaGAAACAAGTAGATGCGGGGAAAGGCGAAAGTGAGGCCGACTCC +
Preference number: 1 (lower is better)
Translates to: LKVHRQLDPVKYHWP*KQVDAGKGESEADS
Trigger: GGAGTCGGCCTCACTTTCGCCTTTCCCCGCATCTACTTGTTTCCAAGGCCAGTGGTACTTAACTGGGTCAAGTTGCCTGTGGACCTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR CCA 90 bp ACATCCTTGGTGGGCGGCTGGATAGGCACACATCTTCACTGGGCTTaGAATGGAGCCTTTCCTGCAGGCAGTGAGGAACATGGCAATTCT +
Preference number: 1 (lower is better)
Translates to: TSLVGGWIGTHLHWA*NGAFPAGSEEHGNS
Trigger: AGAATTGCCATGTTCCTCACTGCCTGCAGGAAAGGCTCCATTCCAAGCCCAGTGAAGATGTGTGCCTATCCAGCCGCCCACCAAGGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR CCA 90 bp CTACTTCAGTGGCTGGCACATGGTGGACCCTTGATAAAAGCTTCTTaGATAGATAGGCAGAAACTAACTAGACACAGGTATAAAATGGAA +
Preference number: 1 (lower is better)
Translates to: LLQWLAHGGPLIKAS*IDRQKLTRHRYKME
Trigger: TTCCATTTTATACCTGTGTCTAGTTAGTTTCTGCCTATCTATCCAAGAAGCTTTTATCAAGGGTCCACCATGTGCCAGCCACTGAAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR TCA 90 bp GTTTTCGGAACCGTATCTTTAACAGAGCGGACAAATCCAGTAAGATaGCAGTTCGTATACCATCATCCATACCTTACACATCCTTGTATT +
Preference number: 1 (lower is better)
Translates to: VFGTVSLTERTNPVR*QFVYHHPYLTHPCI
Trigger: AATACAAGGATGTGTAAGGTATGGATGATGGTATACGAACTGTCATCTTACTGGATTTGTCCGCTCTGTTAAAGATACGGTTCCGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR TCA 90 bp GGCAAACTTCAGATTAGATTGTTGTGTGTTCATGATGGCCTCACATaGGAGAATAGACATGAAAGAGATGAGGTGATTCTGTCCTTCTTT +
Preference number: 1 (lower is better)
Translates to: GKLQIRLLCVHDGLT*ENRHERDEVILSFF
Trigger: AAAGAAGGACAGAATCACCTCATCTCTTTCATGTCTATTCTCTCATGTGAGGCCATCATGAACACACAACAATCTAATCTGAAGTTTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378426.5
3UTR-3UTR TCA 90 bp CTGGGTCCTGCCTGTCCACTGGTCACTCGAGTCACCATTCTCCAGCTCCCCACAAGCTCACCACAGCCTTaGCCACCTGGGCTCAAGGGA +
Preference number: 2 (lower is better)
Translates to: LGPACPLVTRVTILQLPTSSPQP*PPGLKG
Trigger: TCCCTTGAGCCCAGGTGGTCAAGGCTGTGGTGAGCT...TGTGGGGAGCTGGAGAATGGTGACTCGAGTGACCAGTGGACAGGCAGGACCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR GCA 90 bp CTGGGTCCTGCCTGTCCACTGGTCACTCGAGTCACCATTCTCCAGCTCCCCACACTGGGCCCACCTCCTTaGCCTACTGCCTTAGGCTAC +
Preference number: 2 (lower is better)
Translates to: LGPACPLVTRVTILQLPTLGPPP*PTALGY
Trigger: GTAGCCTAAGGCAGTAGGGCAAGGAGGTGGGCCCAG...TGTGGGGAGCTGGAGAATGGTGACTCGAGTGACCAGTGGACAGGCAGGACCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CCA 90 bp GGCCGACTCCACGGACCACTGCCTATGATGGGGCAGTCATTGCGCAGTTTGGGATTGCCTGCCAGTGGGTaGAGCACTCCAGGTGAGCCT +
Preference number: 2 (lower is better)
Translates to: GRLHGPLPMMGQSLRSLGLPASG*STPGEP
Trigger: AGGCTCACCTGGAGTGCTCCACCCACTGGCAGGCAA...TCCCAAACTGCGCAATGACTGCCCCATCATAGGCAGTGGTCCGTGGAGTCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR TCA 90 bp CCTATGATGGGGCAGTCATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGGTGGAGCACTCCAGGTaGGCCTCTGGCACAGGCCTG +
Preference number: 2 (lower is better)
Translates to: PMMGQSLRSLGNQQEELRVEHSR*ASGTGL
Trigger: CAGGCCTGTGCCAGAGGCTCACCTGGAGTGCTCCAC...CCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAATGACTGCCCCATCATAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CCA 90 bp GGCCGACTCCACGGACCACTGCCTATGATGGGGCAGTCATTGCGCAGTTTGGGAACAGCCTTGACCACCTaGGCTCAAGGGATCCTCCCA +
Preference number: 2 (lower is better)
Translates to: GRLHGPLPMMGQSLRSLGTALTT*AQGILP
Trigger: TGGGAGGATCCCTTGAGCCCAGGTGGTCAAGGCTGT...TCCCAAACTGCGCAATGACTGCCCCATCATAGGCAGTGGTCCGTGGAGTCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR GCA 90 bp ATGGGGCAGTCATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGAGTGGACTGGGCCCACCTCCTTaGCCTACTGCCTTAGGCTAC +
Preference number: 2 (lower is better)
Translates to: MGQSLRSLGNQQEELRSGLGPPP*PTALGY
Trigger: GTAGCCTAAGGCAGTAGGGCAAGGAGGTGGGCCCAG...TCCACTCCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAATGACTGCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CCA 90 bp GCAGTCATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGAGTGGATGACTCTCCAGGTGAGCCTCTaGCACAGGCCTGGCCAAACA +
Preference number: 2 (lower is better)
Translates to: AVIAQFGKPAGGTQEWMTLQVSL*HRPGQT
Trigger: TGTTTGGCCAGGCCTGTGCCAGAGGCTCACCTGGAG...AGTCATCCACTCCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAATGACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CCA 90 bp GCAGTCATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGAGTGGATGACTTTGCCTGCCAGTGGGTaGAGCACTCCAGGTGAGCCT +
Preference number: 2 (lower is better)
Translates to: AVIAQFGKPAGGTQEWMTLPASG*STPGEP
Trigger: AGGCTCACCTGGAGTGCTCCACCCACTGGCAGGCAA...AGTCATCCACTCCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAATGACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CCA 90 bp GGCCGACTCCACGGACCACTGCCTATGATGGGGCAGTCATTGCGCAGTTTGGGACAGCCTTGGGGATCCTaGGTGAATAGGAATAGGACT +
Preference number: 2 (lower is better)
Translates to: GRLHGPLPMMGQSLRSLGQPWGS*VNRNRT
Trigger: AGTCCTATTCCTATTCACCCAGGATCCCCAAGGCTG...TCCCAAACTGCGCAATGACTGCCCCATCATAGGCAGTGGTCCGTGGAGTCGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR TCA 90 bp GGATCCTGGGTGAATAGGAATAGGACTTGCCTGCCAGTGGGTGGAGCACTCCAGCTTGGGGATCCTGGGTaGATAGGAATAGGACTTGCC +
Preference number: 2 (lower is better)
Translates to: GSWVNRNRTCLPVGGALQLGDPG*IGIGLA
Trigger: GGCAAGTCCTATTCCTATTCACCCAGGATCCCCAAG...CTGGAGTGCTCCACCCACTGGCAGGCAAGTCCTATTCCTATTCACCCAGGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CCA 90 bp GGATCCTGGGTGAATAGGAATAGGACTTGCCTGCCAGTGGGTGGAGCACTCCAGGTGAGCCATCACACCTaGCCTGGTAGCAAGTTTTGG +
Preference number: 2 (lower is better)
Translates to: GSWVNRNRTCLPVGGALQVSHHT*PGSKFW
Trigger: CCAAAACTTGCTACCAGGCCAGGTGTGATGGCTCAC...CTGGAGTGCTCCACCCACTGGCAGGCAAGTCCTATTCCTATTCACCCAGGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CCA 90 bp ATGGGGCAGTCATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGAGTGGATCACTGGGCTTGGAATaGAGCCTTTCCTGCAGGCAG +
Preference number: 2 (lower is better)
Translates to: MGQSLRSLGNQQEELRSGSLGLE*SLSCRQ
Trigger: CTGCCTGCAGGAAAGGCTCCATTCCAAGCCCAGTGA...TCCACTCCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAATGACTGCCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR TCA 90 bp GGCCGACTCCACGGACCACTGCCTATGATGGGGCAGTCATTGCGCAGTTTGGGATTCACAGAACATGCCTaGTTTTTGTTGACGGGCAAC +
Preference number: 2 (lower is better)
Translates to: GRLHGPLPMMGQSLRSLGFTEHA*FLLTGN
Trigger: GTTGCCCGTCAACAAAAATCAGGCATGTTCTGTGAA...TCCCAAACTGCGCAATGACTGCCCCATCATAGGCAGTGGTCCGTGGAGTCGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR TCA 90 bp CCTATGATGGGGCAGTCATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGCTTGGGGATCCTGGGTaGATAGGAATAGGACTTGCC +
Preference number: 2 (lower is better)
Translates to: PMMGQSLRSLGNQQEELRLGDPG*IGIGLA
Trigger: GGCAAGTCCTATTCCTATTCACCCAGGATCCCCAAG...CCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAATGACTGCCCCATCATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR GCA 90 bp ATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGAGTGGATGACTTTAGGGGGAATAGGACTTGCCTaGCAGTGGGTGGAGCACTCC +
Preference number: 2 (lower is better)
Translates to: IAQFGKPAGGTQEWMTLGGIGLA*QWVEHS
Trigger: GGAGTGCTCCACCCACTGGCAGGCAAGTCCTATTCC...CCCTAAAGTCATCCACTCCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR GCA 90 bp ACTTTAACAGTGCTGCTGTACACATCCTGTTGTGCACACCCTTGTGCCCAGGTGAAGCTCCCCTGCTCCTaGCTGACATCCCCGCTTGTA +
Preference number: 2 (lower is better)
Translates to: TLTVLLYTSCCAHPCAQVKLPCS*LTSPLV
Trigger: TACAAGCGGGGATGTCAGGCAGGAGCAGGGGAGCTT...CACCTGGGCACAAGGGTGTGCACAACAGGATGTGTACAGCAGCACTGTTAAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CCA 90 bp CACATCTTCACTGGGCTTGGAATGGAGCCTTTCCTGCAGGCAGTGAGGAACATGTCACTGGGCTTGGAATaGAGCCTTTCCTGCAGGCAG +
Preference number: 2 (lower is better)
Translates to: HIFTGLGMEPFLQAVRNMSLGLE*SLSCRQ
Trigger: CTGCCTGCAGGAAAGGCTCCATTCCAAGCCCAGTGA...CATGTTCCTCACTGCCTGCAGGAAAGGCTCCATTCCAAGCCCAGTGAAGATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR CAA 90 bp CACCAAATAAACCCCTGCCCTCCACCCATTCTACAGATGACATCCTaGGTGGGCGGCTGGATAGGCACACATCTTCACTGGGCTTGGAAT +
Preference number: 2 (lower is better)
Translates to: HQINPCPPPILQMTS*VGGWIGTHLHWAWN
Trigger: ATTCCAAGCCCAGTGAAGATGTGTGCCTATCCAGCCGCCCACCAAGGATGTCATCTGTAGAATGGGTGGAGGGCAGGGGTTTATTTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CCA 90 bp ATGGGGCAGTCATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGAGTGGACAGCCTTGGGGATCCTaGGTGAATAGGAATAGGACT +
Preference number: 2 (lower is better)
Translates to: MGQSLRSLGNQQEELRSGQPWGS*VNRNRT
Trigger: AGTCCTATTCCTATTCACCCAGGATCCCCAAGGCTG...TCCACTCCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAATGACTGCCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CCA 90 bp AGGCAACTTGACCCAGTTAAGTACCACTGGCCTTGGAAACAAGTAGATGCGGGGGTGAGCCATCACACCTaGCCTGGTAGCAAGTTTTGG +
Preference number: 2 (lower is better)
Translates to: RQLDPVKYHWPWKQVDAGVSHHT*PGSKFW
Trigger: CCAAAACTTGCTACCAGGCCAGGTGTGATGGCTCAC...CCCCGCATCTACTTGTTTCCAAGGCCAGTGGTACTTAACTGGGTCAAGTTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CCA 90 bp GGCCGACTCCACGGACCACTGCCTATGATGGGGCAGTCATTGCGCAGTTTGGGAATAGCAGAAAATCCCTaGGTGGTAGCAAGTTTTGTT +
Preference number: 2 (lower is better)
Translates to: GRLHGPLPMMGQSLRSLGIAENP*VVASFV
Trigger: AACAAAACTTGCTACCACCCAGGGATTTTCTGCTAT...TCCCAAACTGCGCAATGACTGCCCCATCATAGGCAGTGGTCCGTGGAGTCGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CCA 90 bp CACATCTTCACTGGGCTTGGAATGGAGCCTTTCCTGCAGGCAGTGAGGAACATGAGTCATTGCGCAGTTTaGGAAACCAGCAGGAGGAAC +
Preference number: 2 (lower is better)
Translates to: HIFTGLGMEPFLQAVRNMSHCAV*ETSRRN
Trigger: GTTCCTCCTGCTGGTTTCCCAAACTGCGCAATGACT...CATGTTCCTCACTGCCTGCAGGAAAGGCTCCATTCCAAGCCCAGTGAAGATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR TCA 90 bp CCCATTCTACAGATGACATCCTTGGTGGGCGGCTGGATAGGCACACATCTTCACACAGAAAAGGATGTCTaGGATGGAAGCCATGCTGAC +
Preference number: 2 (lower is better)
Translates to: PILQMTSLVGGWIGTHLHTEKDV*DGSHAD
Trigger: GTCAGCATGGCTTCCATCTCAGACATCCTTTTCTGT...GTGAAGATGTGTGCCTATCCAGCCGCCCACCAAGGATGTCATCTGTAGAATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR TCA 90 bp GTATTTATATCTACTTCAGTGGCTGGCACATGGTGGACCCTTGATAAAAGCTTCGGGGAAAGGCGAAAGTaGGGCCGACTCCACGGACCA +
Preference number: 2 (lower is better)
Translates to: VFISTSVAGTWWTLDKSFGERRK*GRLHGP
Trigger: TGGTCCGTGGAGTCGGCCTCACTTTCGCCTTTCCCC...GAAGCTTTTATCAAGGGTCCACCATGTGCCAGCCACTGAAGTAGATATAAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR GCA 90 bp ACAGTGCAGCATCGCTTCATTCTTTCCAACAGTTGCATAAGATCCTGTAGTATGTGCTGGCCTGGGTCCTaGCTGTCCACTGGTCACTCG +
Preference number: 2 (lower is better)
Translates to: TVQHRFILSNSCIRSCSMCWPGS*LSTGHS
Trigger: CGAGTGACCAGTGGACAGGCAGGACCCAGGCCAGCA...CATACTACAGGATCTTATGCAACTGTTGGAAAGAATGAAGCGATGCTGCACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR TCA 90 bp ACAGTGCAGCATCGCTTCATTCTTTCCAACAGTTGCATAAGATCCTGTAGTATGAGCTCACCACAGCCTTaGCCACCTGGGCTCAAGGGA +
Preference number: 2 (lower is better)
Translates to: TVQHRFILSNSCIRSCSMSSPQP*PPGLKG
Trigger: TCCCTTGAGCCCAGGTGGTCAAGGCTGTGGTGAGCT...CATACTACAGGATCTTATGCAACTGTTGGAAAGAATGAAGCGATGCTGCACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR TCA 90 bp AGAGCGGACAAATCCAGTAAGATGACAGTTCGTATACCATCATCCATACCTTACACTCCTGACCTCAGGTaGTCCGCCCTACTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: RADKSSKMTVRIPSSIPYTPDLR*SALLSL
Trigger: GAGGCTGAGTAGGGCGGATCACCTGAGGTCAGGAGT...GTAAGGTATGGATGATGGTATACGAACTGTCATCTTACTGGATTTGTCCGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CCA 90 bp CAGCATCGCTTCATTCTTTCCAACAGTTGCATAAGATCCTGTAGTATGGATGTGCTCCAGGTGAGCCTCTaGCACAGGCCTGGCCAAACA +
Preference number: 2 (lower is better)
Translates to: QHRFILSNSCIRSCSMDVLQVSL*HRPGQT
Trigger: TGTTTGGCCAGGCCTGTGCCAGAGGCTCACCTGGAG...CACATCCATACTACAGGATCTTATGCAACTGTTGGAAAGAATGAAGCGATGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CCA 90 bp ATGGGGCAGTCATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGAGTGGACCAGTTAAGTACCACTaGCCTTGGAAACAAGTAGAT +
Preference number: 2 (lower is better)
Translates to: MGQSLRSLGNQQEELRSGPVKYH*PWKQVD
Trigger: ATCTACTTGTTTCCAAGGCCAGTGGTACTTAACTGG...TCCACTCCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAATGACTGCCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR TCA 90 bp ACAGTGCAGCATCGCTTCATTCTTTCCAACAGTTGCATAAGATCCTGTAGTATGACGGACCACTGCCTATaGTGGGGCAGTCATTGCGCA +
Preference number: 2 (lower is better)
Translates to: TVQHRFILSNSCIRSCSMTDHCL*WGSHCA
Trigger: TGCGCAATGACTGCCCCATCATAGGCAGTGGTCCGT...CATACTACAGGATCTTATGCAACTGTTGGAAAGAATGAAGCGATGCTGCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR TCA 90 bp AGAGCGGACAAATCCAGTAAGATGACAGTTCGTATACCATCATCCATACCTTACACGGACCACTGCCTATaGTGGGGCAGTCATTGCGCA +
Preference number: 2 (lower is better)
Translates to: RADKSSKMTVRIPSSIPYTDHCL*WGSHCA
Trigger: TGCGCAATGACTGCCCCATCATAGGCAGTGGTCCGT...GTAAGGTATGGATGATGGTATACGAACTGTCATCTTACTGGATTTGTCCGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR GCA 90 bp CAGCATCGCTTCATTCTTTCCAACAGTTGCATAAGATCCTGTAGTATGGATGTGGTGATCTCGGCTCACTaGAACCTCCACCTCCCCAGT +
Preference number: 2 (lower is better)
Translates to: QHRFILSNSCIRSCSMDVVISAH*NLHLPS
Trigger: ACTGGGGAGGTGGAGGTTGCAGTGAGCCGAGATCAC...CACATCCATACTACAGGATCTTATGCAACTGTTGGAAAGAATGAAGCGATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CCA 90 bp CACATCTTCACTGGGCTTGGAATGGAGCCTTTCCTGCAGGCAGTGAGGAACATGGACTTCAGGTGTATTTaGCTAAACAGGGAGTTGATG +
Preference number: 2 (lower is better)
Translates to: HIFTGLGMEPFLQAVRNMDFRCI*LNRELM
Trigger: CATCAACTCCCTGTTTAGCCAAATACACCTGAAGTC...CATGTTCCTCACTGCCTGCAGGAAAGGCTCCATTCCAAGCCCAGTGAAGATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378426.5
3UTR-3UTR TCA 90 bp GCGCGAGTCACTGCGCCCAGCTGCTATACATTGTTAAACCTTTTGCTTTCTAGTAATACTCCCAAGCTATaGGGGGACCCTTCAGTCAAA +
Preference number: 2 (lower is better)
Translates to: ARVTAPSCYTLLNLLLSSNTPKL*GDPSVK
Trigger: TTTGACTGAAGGGTCCCCTCATAGCTTGGGAGTATT...ACTAGAAAGCAAAAGGTTTAACAATGTATAGCAGCTGGGCGCAGTGACTCGCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR TCA 90 bp GTATTTATATCTACTTCAGTGGCTGGCACATGGTGGACCCTTGATAAAAGCTTCCACCCATTCTACAGATaGCATCCTTGGTGGGCGGCT +
Preference number: 2 (lower is better)
Translates to: VFISTSVAGTWWTLDKSFHPFYR*HPWWAA
Trigger: AGCCGCCCACCAAGGATGTCATCTGTAGAATGGGTG...GAAGCTTTTATCAAGGGTCCACCATGTGCCAGCCACTGAAGTAGATATAAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR GCA 90 bp ACAGTGCAGCATCGCTTCATTCTTTCCAACAGTTGCATAAGATCCTGTAGTATGGTGATCCGCCCACAGTaGTGGGATTACAGGCGTGAA +
Preference number: 2 (lower is better)
Translates to: TVQHRFILSNSCIRSCSMVIRPQ*WDYRRE
Trigger: TTCACGCCTGTAATCCCAGCACTGTGGGCGGATCAC...CATACTACAGGATCTTATGCAACTGTTGGAAAGAATGAAGCGATGCTGCACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CCA 90 bp GTATTTATATCTACTTCAGTGGCTGGCACATGGTGGACCCTTGATAAAAGCTTCGTCCTGCCTGTCCACTaGTCACTCGAGTCACCATTC +
Preference number: 2 (lower is better)
Translates to: VFISTSVAGTWWTLDKSFVLPVH*SLESPF
Trigger: GAATGGTGACTCGAGTGACCAGTGGACAGGCAGGAC...GAAGCTTTTATCAAGGGTCCACCATGTGCCAGCCACTGAAGTAGATATAAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR TCA 90 bp CAGCATCGCTTCATTCTTTCCAACAGTTGCATAAGATCCTGTAGTATGGATGTGCAGTCAAATATTCACTaGGCATGTGAGGGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: QHRFILSNSCIRSCSMDVQSNIH*ACEGQA
Trigger: GGCCTGGCCCTCACATGCTCAGTGAATATTTGACTG...CACATCCATACTACAGGATCTTATGCAACTGTTGGAAAGAATGAAGCGATGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR TCA 90 bp GCAGTCATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGAGTGGATGACTTTAATTCTAGACCAATaGCTTCAGGTGTATTTGGCT +
Preference number: 2 (lower is better)
Translates to: AVIAQFGKPAGGTQEWMTLILDQ*LQVYLA
Trigger: AGCCAAATACACCTGAAGTCATTGGTCTAGAATTAA...AGTCATCCACTCCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAATGACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378426.5
3UTR-3UTR GCA 90 bp CCTATGATGGGGCAGTCATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGGGCAATGTTTCTTCTTaGTTTCCTCTAAAAAGGAAA +
Preference number: 2 (lower is better)
Translates to: PMMGQSLRSLGNQQEELRGNVSS*FPLKRK
Trigger: TTTCCTTTTTAGAGGAAAGCAAGAAGAAACATTGCC...CCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAATGACTGCCCCATCATAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR GCA 90 bp GTATTTATATCTACTTCAGTGGCTGGCACATGGTGGACCCTTGATAAAAGCTTCACCTCCTTGCCCTACTaGCTTAGGCTACTCCAACCT +
Preference number: 2 (lower is better)
Translates to: VFISTSVAGTWWTLDKSFTSLPY*LRLLQP
Trigger: AGGTTGGAGTAGCCTAAGGCAGTAGGGCAAGGAGGT...GAAGCTTTTATCAAGGGTCCACCATGTGCCAGCCACTGAAGTAGATATAAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR GCA 90 bp GCGCGAGTCACTGCGCCCAGCTGCTATACATTGTTAAACCTTTTGCTTTCTAGTTGTCTTAGAGATCACTaGATGACCACAGTGCAGCAT +
Preference number: 2 (lower is better)
Translates to: ARVTAPSCYTLLNLLLSSCLRDH*MTTVQH
Trigger: ATGCTGCACTGTGGTCATGCAGTGATCTCTAAGACA...ACTAGAAAGCAAAAGGTTTAACAATGTATAGCAGCTGGGCGCAGTGACTCGCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CCA 90 bp GTATTTATATCTACTTCAGTGGCTGGCACATGGTGGACCCTTGATAAAAGCTTCGTGAGGGCCAGGCCCTaGGAGCTTACTTTTCAAAAG +
Preference number: 2 (lower is better)
Translates to: VFISTSVAGTWWTLDKSFVRARP*ELTFQK
Trigger: CTTTTGAAAAGTAAGCTCCCAGGGCCTGGCCCTCAC...GAAGCTTTTATCAAGGGTCCACCATGTGCCAGCCACTGAAGTAGATATAAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR TCA 90 bp GCGCGAGTCACTGCGCCCAGCTGCTATACATTGTTAAACCTTTTGCTTTCTAGTATTGTTGTGTGTTCATaGTGGCCTCACATGAGAGAA +
Preference number: 2 (lower is better)
Translates to: ARVTAPSCYTLLNLLLSSIVVCS*WPHMRE
Trigger: TTCTCTCATGTGAGGCCATCATGAACACACAACAAT...ACTAGAAAGCAAAAGGTTTAACAATGTATAGCAGCTGGGCGCAGTGACTCGCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378426.5
3UTR-3UTR GCA 90 bp TTACAGGCACATTTGCACTCATCTGGGCTTTACAAAGTGATATTAAGTGCATTTGGAATAGGACTTGCCTaGCAGTGGGTGGAGCACTCC +
Preference number: 2 (lower is better)
Translates to: LQAHLHSSGLYKVILSAFGIGLA*QWVEHS
Trigger: GGAGTGCTCCACCCACTGGCAGGCAAGTCCTATTCC...AAATGCACTTAATATCACTTTGTAAAGCCCAGATGAGTGCAAATGTGCCTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR GCA 90 bp ACAGTGCAGCATCGCTTCATTCTTTCCAACAGTTGCATAAGATCCTGTAGTATGAATAGGAATAGGACTTaGCTGCCAGTGGGTGGAGCA +
Preference number: 2 (lower is better)
Translates to: TVQHRFILSNSCIRSCSMNRNRT*LPVGGA
Trigger: TGCTCCACCCACTGGCAGGCAAGTCCTATTCCTATT...CATACTACAGGATCTTATGCAACTGTTGGAAAGAATGAAGCGATGCTGCACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR GCA 90 bp AAATCCAGTAAGATGACAGTTCGTATACCATCATCCATACCTTACACATCCTTGGTGATCCGCCCACAGTaGTGGGATTACAGGCGTGAA +
Preference number: 2 (lower is better)
Translates to: KSSKMTVRIPSSIPYTSLVIRPQ*WDYRRE
Trigger: TTCACGCCTGTAATCCCAGCACTGTGGGCGGATCAC...CAAGGATGTGTAAGGTATGGATGATGGTATACGAACTGTCATCTTACTGGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR GCA 90 bp TTACAGGCACATTTGCACTCATCTGGGCTTTACAAAGTGATATTAAGTGCATTTAAGCTCCCCTGCTCCTaGCTGACATCCCCGCTTGTA +
Preference number: 2 (lower is better)
Translates to: LQAHLHSSGLYKVILSAFKLPCS*LTSPLV
Trigger: TACAAGCGGGGATGTCAGGCAGGAGCAGGGGAGCTT...AAATGCACTTAATATCACTTTGTAAAGCCCAGATGAGTGCAAATGTGCCTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR GCA 90 bp CAGCATCGCTTCATTCTTTCCAACAGTTGCATAAGATCCTGTAGTATGGATGTGCACCAAATAAACCCCTaGCCTCCACCCATTCTACAG +
Preference number: 2 (lower is better)
Translates to: QHRFILSNSCIRSCSMDVHQINP*PPPILQ
Trigger: CTGTAGAATGGGTGGAGGGCAGGGGTTTATTTGGTG...CACATCCATACTACAGGATCTTATGCAACTGTTGGAAAGAATGAAGCGATGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CCA 90 bp TTACAGGCACATTTGCACTCATCTGGGCTTTACAAAGTGATATTAAGTGCATTTACAGCCTTGACCACCTaGGCTCAAGGGATCCTCCCA +
Preference number: 2 (lower is better)
Translates to: LQAHLHSSGLYKVILSAFTALTT*AQGILP
Trigger: TGGGAGGATCCCTTGAGCCCAGGTGGTCAAGGCTGT...AAATGCACTTAATATCACTTTGTAAAGCCCAGATGAGTGCAAATGTGCCTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CCA 90 bp GTATTTATATCTACTTCAGTGGCTGGCACATGGTGGACCCTTGATAAAAGCTTCAGTCATTGCGCAGTTTaGGAAACCAGCAGGAGGAAC +
Preference number: 2 (lower is better)
Translates to: VFISTSVAGTWWTLDKSFSHCAV*ETSRRN
Trigger: GTTCCTCCTGCTGGTTTCCCAAACTGCGCAATGACT...GAAGCTTTTATCAAGGGTCCACCATGTGCCAGCCACTGAAGTAGATATAAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CCA 90 bp CAGCATCGCTTCATTCTTTCCAACAGTTGCATAAGATCCTGTAGTATGGATGTGGGCACACATCTTCACTaGGCTTGGAATGGAGCCTTT +
Preference number: 2 (lower is better)
Translates to: QHRFILSNSCIRSCSMDVGTHLH*AWNGAF
Trigger: AAAGGCTCCATTCCAAGCCCAGTGAAGATGTGTGCC...CACATCCATACTACAGGATCTTATGCAACTGTTGGAAAGAATGAAGCGATGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CCA 90 bp AAATCCAGTAAGATGACAGTTCGTATACCATCATCCATACCTTACACATCCTTGTCCTTGGTGGGCGGCTaGATAGGCACACATCTTCAC +
Preference number: 2 (lower is better)
Translates to: KSSKMTVRIPSSIPYTSLSLVGG*IGTHLH
Trigger: GTGAAGATGTGTGCCTATCCAGCCGCCCACCAAGGA...CAAGGATGTGTAAGGTATGGATGATGGTATACGAACTGTCATCTTACTGGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CCA 90 bp CAGCATCGCTTCATTCTTTCCAACAGTTGCATAAGATCCTGTAGTATGGATGTGGTGGCTGGCACATGGTaGACCCTTGATAAAAGCTTC +
Preference number: 2 (lower is better)
Translates to: QHRFILSNSCIRSCSMDVVAGTW*TLDKSF
Trigger: GAAGCTTTTATCAAGGGTCCACCATGTGCCAGCCAC...CACATCCATACTACAGGATCTTATGCAACTGTTGGAAAGAATGAAGCGATGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR TCA 90 bp ACAGTGCAGCATCGCTTCATTCTTTCCAACAGTTGCATAAGATCCTGTAGTATGACAGAAAAGGATGTCTaGGATGGAAGCCATGCTGAC +
Preference number: 2 (lower is better)
Translates to: TVQHRFILSNSCIRSCSMTEKDV*DGSHAD
Trigger: GTCAGCATGGCTTCCATCTCAGACATCCTTTTCTGT...CATACTACAGGATCTTATGCAACTGTTGGAAAGAATGAAGCGATGCTGCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR GCA 90 bp ATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGAGTGGATGACTTTAGGGGGCAATGTTTCTTCTTaGTTTCCTCTAAAAAGGAAA +
Preference number: 2 (lower is better)
Translates to: IAQFGKPAGGTQEWMTLGGNVSS*FPLKRK
Trigger: TTTCCTTTTTAGAGGAAAGCAAGAAGAAACATTGCC...CCCTAAAGTCATCCACTCCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CCA 90 bp AACAACTTTCCAGACCTCTACTATTCTAAAACACAAAGAGCATTACAGCTTGCTCAGGCTGGAATGCAGTaGTGTGATCTCGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: NNFPDLYYSKTQRALQLAQAGMQ*CDLGSL
Trigger: CAGTGAGCCGAGATCACACCACTGCATTCCAGCCTG...AGCAAGCTGTAATGCTCTTTGTGTTTTAGAATAGTAGAGGTCTGGAAAGTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR TCA 90 bp ACAGTGCAGCATCGCTTCATTCTTTCCAACAGTTGCATAAGATCCTGTAGTATGTTCACAGAACATGCCTaGTTTTTGTTGACGGGCAAC +
Preference number: 2 (lower is better)
Translates to: TVQHRFILSNSCIRSCSMFTEHA*FLLTGN
Trigger: GTTGCCCGTCAACAAAAATCAGGCATGTTCTGTGAA...CATACTACAGGATCTTATGCAACTGTTGGAAAGAATGAAGCGATGCTGCACTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR GCA 90 bp TTACAGGCACATTTGCACTCATCTGGGCTTTACAAAGTGATATTAAGTGCATTTACCTCCTTGCCCTACTaGCTTAGGCTACTCCAACCT +
Preference number: 2 (lower is better)
Translates to: LQAHLHSSGLYKVILSAFTSLPY*LRLLQP
Trigger: AGGTTGGAGTAGCCTAAGGCAGTAGGGCAAGGAGGT...AAATGCACTTAATATCACTTTGTAAAGCCCAGATGAGTGCAAATGTGCCTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CCA 90 bp AAGATTCCATTTGATCCCAAGTTTTGTACCTCACATCTAGAAGCTCTGAAATATGTCCTGCCTGTCCACTaGTCACTCGAGTCACCATTC +
Preference number: 2 (lower is better)
Translates to: KIPFDPKFCTSHLEALKYVLPVH*SLESPF
Trigger: GAATGGTGACTCGAGTGACCAGTGGACAGGCAGGAC...ATATTTCAGAGCTTCTAGATGTGAGGTACAAAACTTGGGATCAAATGGAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CCA 90 bp TTACAGGCACATTTGCACTCATCTGGGCTTTACAAAGTGATATTAAGTGCATTTGTGAGGGCCAGGCCCTaGGAGCTTACTTTTCAAAAG +
Preference number: 2 (lower is better)
Translates to: LQAHLHSSGLYKVILSAFVRARP*ELTFQK
Trigger: CTTTTGAAAAGTAAGCTCCCAGGGCCTGGCCCTCAC...AAATGCACTTAATATCACTTTGTAAAGCCCAGATGAGTGCAAATGTGCCTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CCA 90 bp AACAACTTTCCAGACCTCTACTATTCTAAAACACAAAGAGCATTACAGCTTGCTCCACATTGGCCAGGTTaGTCTCAAACTCCTGACCTC +
Preference number: 2 (lower is better)
Translates to: NNFPDLYYSKTQRALQLAPHWPG*SQTPDL
Trigger: GAGGTCAGGAGTTTGAGACCAACCTGGCCAATGTGG...AGCAAGCTGTAATGCTCTTTGTGTTTTAGAATAGTAGAGGTCTGGAAAGTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR CAA 90 bp AGTAAGATGACAGTTCGTATACCATCATCCATACCTTACACATCCTaGTATTTATATCTACTTCAGTGGCTGGCACATGGTGGACCCTTG +
Preference number: 2 (lower is better)
Translates to: SKMTVRIPSSIPYTS*YLYLLQWLAHGGPL
Trigger: CAAGGGTCCACCATGTGCCAGCCACTGAAGTAGATATAAATACAAGGATGTGTAAGGTATGGATGATGGTATACGAACTGTCATCTTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR TCA 90 bp ACAGTGCAGCATCGCTTCATTCTTTCCAACAGTTGCATAAGATCCTGTAGTATGCATGATGGCCTCACATaGGAGAATAGACATGAAAGA +
Preference number: 2 (lower is better)
Translates to: TVQHRFILSNSCIRSCSMHDGLT*ENRHER
Trigger: TCTTTCATGTCTATTCTCTCATGTGAGGCCATCATG...CATACTACAGGATCTTATGCAACTGTTGGAAAGAATGAAGCGATGCTGCACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378426.5
3UTR-3UTR GCA 90 bp AGAGCGGACAAATCCAGTAAGATGACAGTTCGTATACCATCATCCATACCTTACGACTTTCACAGAACATaGCTGATTTTTGTTGACGGG +
Preference number: 2 (lower is better)
Translates to: RADKSSKMTVRIPSSIPYDFHRT*LIFVDG
Trigger: CCCGTCAACAAAAATCAGGCATGTTCTGTGAAAGTC...GTAAGGTATGGATGATGGTATACGAACTGTCATCTTACTGGATTTGTCCGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CCA 90 bp AAATCCAGTAAGATGACAGTTCGTATACCATCATCCATACCTTACACATCCTTGTTATATCTACTTCAGTaGCTGGCACATGGTGGACCC +
Preference number: 2 (lower is better)
Translates to: KSSKMTVRIPSSIPYTSLLYLLQ*LAHGGP
Trigger: GGGTCCACCATGTGCCAGCCACTGAAGTAGATATAA...CAAGGATGTGTAAGGTATGGATGATGGTATACGAACTGTCATCTTACTGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR CAA 90 bp TCCTTGTATTTATATCTACTTCAGTGGCTGGCACATGGTGGACCCTaGATAAAAGCTTCTTGGATAGATAGGCAGAAACTAACTAGACAC +
Preference number: 2 (lower is better)
Translates to: SLYLYLLQWLAHGGP*IKASWIDRQKLTRH
Trigger: GTGTCTAGTTAGTTTCTGCCTATCTATCCAAGAAGCTTTTATCAAGGGTCCACCATGTGCCAGCCACTGAAGTAGATATAAATACAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR GCA 90 bp ACAGTGCAGCATCGCTTCATTCTTTCCAACAGTTGCATAAGATCCTGTAGTATGTATATGATGCTACATTaGCTTAAAGCCCTCTCTAGG +
Preference number: 2 (lower is better)
Translates to: TVQHRFILSNSCIRSCSMYMMLH*LKALSR
Trigger: CCTAGAGAGGGCTTTAAGGCAATGTAGCATCATATA...CATACTACAGGATCTTATGCAACTGTTGGAAAGAATGAAGCGATGCTGCACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CCA 90 bp AAGATTCCATTTGATCCCAAGTTTTGTACCTCACATCTAGAAGCTCTGAAATATAAGTACCACTGGCCTTaGAAACAAGTAGATGCGGGG +
Preference number: 2 (lower is better)
Translates to: KIPFDPKFCTSHLEALKYKYHWP*KQVDAG
Trigger: CCCCGCATCTACTTGTTTCCAAGGCCAGTGGTACTT...ATATTTCAGAGCTTCTAGATGTGAGGTACAAAACTTGGGATCAAATGGAATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CCA 90 bp GTATTTATATCTACTTCAGTGGCTGGCACATGGTGGACCCTTGATAAAAGCTTCAGAGCTAGGCATCAATaGTGTCATTTTAAGGCAGAA +
Preference number: 2 (lower is better)
Translates to: VFISTSVAGTWWTLDKSFRARHQ*CHFKAE
Trigger: TTCTGCCTTAAAATGACACCATTGATGCCTAGCTCT...GAAGCTTTTATCAAGGGTCCACCATGTGCCAGCCACTGAAGTAGATATAAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378426.5
3UTR-3UTR TCA 90 bp AGAGCGGACAAATCCAGTAAGATGACAGTTCGTATACCATCATCCATACCTTACAATCAAGATTCCATTTaGTCCCAAGTTTTGTACCTC +
Preference number: 2 (lower is better)
Translates to: RADKSSKMTVRIPSSIPYNQDSI*SQVLYL
Trigger: GAGGTACAAAACTTGGGATCAAATGGAATCTTGATT...GTAAGGTATGGATGATGGTATACGAACTGTCATCTTACTGGATTTGTCCGCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR TCA 90 bp AGAGCGGACAAATCCAGTAAGATGACAGTTCGTATACCATCATCCATACCTTACACAAATCCAGTAAGATaGCAGTTCGTATACCATCAT +
Preference number: 2 (lower is better)
Translates to: RADKSSKMTVRIPSSIPYTNPVR*QFVYHH
Trigger: ATGATGGTATACGAACTGTCATCTTACTGGATTTGT...GTAAGGTATGGATGATGGTATACGAACTGTCATCTTACTGGATTTGTCCGCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR GCA 90 bp TTACAGGCACATTTGCACTCATCTGGGCTTTACAAAGTGATATTAAGTGCATTTGACTTTCACAGAACATaGCTGATTTTTGTTGACGGG +
Preference number: 2 (lower is better)
Translates to: LQAHLHSSGLYKVILSAFDFHRT*LIFVDG
Trigger: CCCGTCAACAAAAATCAGGCATGTTCTGTGAAAGTC...AAATGCACTTAATATCACTTTGTAAAGCCCAGATGAGTGCAAATGTGCCTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR GCA 90 bp CAGCATCGCTTCATTCTTTCCAACAGTTGCATAAGATCCTGTAGTATGGATGTGATTCTTTCCAACAGTTaGATAAGATCCTGTAGTATG +
Preference number: 2 (lower is better)
Translates to: QHRFILSNSCIRSCSMDVILSNS*IRSCSM
Trigger: CATACTACAGGATCTTATGCAACTGTTGGAAAGAAT...CACATCCATACTACAGGATCTTATGCAACTGTTGGAAAGAATGAAGCGATGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CCA 90 bp ACAGTGCAGCATCGCTTCATTCTTTCCAACAGTTGCATAAGATCCTGTAGTATGACATTTGCACTCATCTaGGCTTTACAAAGTGATATT +
Preference number: 2 (lower is better)
Translates to: TVQHRFILSNSCIRSCSMTFALI*ALQSDI
Trigger: AATATCACTTTGTAAAGCCCAGATGAGTGCAAATGT...CATACTACAGGATCTTATGCAACTGTTGGAAAGAATGAAGCGATGCTGCACTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR TCA 90 bp AACAACTTTCCAGACCTCTACTATTCTAAAACACAAAGAGCATTACAGCTTGCTTCAGTGTCCTTTCTTTaGAACAATAAGGACAAAGGC +
Preference number: 2 (lower is better)
Translates to: NNFPDLYYSKTQRALQLASVSFL*NNKDKG
Trigger: GCCTTTGTCCTTATTGTTTCAAAGAAAGGACACTGA...AGCAAGCTGTAATGCTCTTTGTGTTTTAGAATAGTAGAGGTCTGGAAAGTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378426.5
3UTR-3UTR TCA 90 bp AACAACTTTCCAGACCTCTACTATTCTAAAACACAAAGAGCATTACAGCTTGCTGTAAGAATCATTAAGTaGAGAACACAAACCTCAGTG +
Preference number: 2 (lower is better)
Translates to: NNFPDLYYSKTQRALQLAVRIIK*RTQTSV
Trigger: CACTGAGGTTTGTGTTCTTCACTTAATGATTCTTAC...AGCAAGCTGTAATGCTCTTTGTGTTTTAGAATAGTAGAGGTCTGGAAAGTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378426.5
3UTR-3UTR CCA 90 bp AACAACTTTCCAGACCTCTACTATTCTAAAACACAAAGAGCATTACAGCTTGCTCTAAGTTTCCTCGTTTaGAAGAGTTGTGAGATGAAT +
Preference number: 2 (lower is better)
Translates to: NNFPDLYYSKTQRALQLALSFLV*KSCEMN
Trigger: ATTCATCTCACAACTCTTCCAAACGAGGAAACTTAG...AGCAAGCTGTAATGCTCTTTGTGTTTTAGAATAGTAGAGGTCTGGAAAGTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CCA 90 bp AACAACTTTCCAGACCTCTACTATTCTAAAACACAAAGAGCATTACAGCTTGCTACATTTGCACTCATCTaGGCTTTACAAAGTGATATT +
Preference number: 2 (lower is better)
Translates to: NNFPDLYYSKTQRALQLATFALI*ALQSDI
Trigger: AATATCACTTTGTAAAGCCCAGATGAGTGCAAATGT...AGCAAGCTGTAATGCTCTTTGTGTTTTAGAATAGTAGAGGTCTGGAAAGTTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR CCA 72 bp TGCTCCTGCCTGACATCCCCGCTTGTAATGCTGGCCTaGGTCCTGCCTGTCCACTGGTCACTCGAGTCACCA +
Preference number: 3 (lower is better)
Translates to: CSCLTSPLVMLA*VLPVHWSLESP
Trigger: TGGTGACTCGAGTGACCAGTGGACAGGCAGGACCCAGGCCAGCATTACAAGCGGGGATGTCAGGCAGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CAA 90 bp GGCCGACTCCACGGACCACTGCCTATGATGGGGCAGTCATTGCGCAGTTTGGGATGGGGTCTCGCCATCTaGCCCAGGTTGGTCTCAAAC +
Preference number: 3 (lower is better)
Translates to: GRLHGPLPMMGQSLRSLGWGLAI*PRLVSN
Trigger: GTTTGAGACCAACCTGGGCAAGATGGCGAGACCCCA...TCCCAAACTGCGCAATGACTGCCCCATCATAGGCAGTGGTCCGTGGAGTCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR TCA 72 bp GGCGAAAGTGAGGCCGACTCCACGGACCACTGCCTATaGTGGGGCAGTCATTGCGCAGTTTGGGAAACCAGC +
Preference number: 3 (lower is better)
Translates to: GESEADSTDHCL*WGSHCAVWETS
Trigger: GCTGGTTTCCCAAACTGCGCAATGACTGCCCCATCATAGGCAGTGGTCCGTGGAGTCGGCCTCACTTTCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR GCA 72 bp ATAAACCAGCTGCCAAGCGAGAAGCTCCCCTGCTCCTaGCTGACATCCCCGCTTGTAATGCTGGCCTGGGTC +
Preference number: 3 (lower is better)
Translates to: INQLPSEKLPCS*LTSPLVMLAWV
Trigger: GACCCAGGCCAGCATTACAAGCGGGGATGTCAGGCAGGAGCAGGGGAGCTTCTCGCTTGGCAGCTGGTTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR CCA 72 bp TCCTTGGTGGGCGGCTGGATAGGCACACATCTTCACTaGGCTTGGAATGGAGCCTTTCCTGCAGGCAGTGAG +
Preference number: 3 (lower is better)
Translates to: SLVGGWIGTHLH*AWNGAFPAGSE
Trigger: CTCACTGCCTGCAGGAAAGGCTCCATTCCAAGCCCAGTGAAGATGTGTGCCTATCCAGCCGCCCACCAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CAA 90 bp CACATCTTCACTGGGCTTGGAATGGAGCCTTTCCTGCAGGCAGTGAGGAACATGCTACAGATGACATCCTaGGTGGGCGGCTGGATAGGC +
Preference number: 3 (lower is better)
Translates to: HIFTGLGMEPFLQAVRNMLQMTS*VGGWIG
Trigger: GCCTATCCAGCCGCCCACCAAGGATGTCATCTGTAG...CATGTTCCTCACTGCCTGCAGGAAAGGCTCCATTCCAAGCCCAGTGAAGATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR CCA 72 bp CCACCCATTCTACAGATGACATCCTTGGTGGGCGGCTaGATAGGCACACATCTTCACTGGGCTTGGAATGGA +
Preference number: 3 (lower is better)
Translates to: PPILQMTSLVGG*IGTHLHWAWNG
Trigger: TCCATTCCAAGCCCAGTGAAGATGTGTGCCTATCCAGCCGCCCACCAAGGATGTCATCTGTAGAATGGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CAA 90 bp GCGCGAGTCACTGCGCCCAGCTGCTATACATTGTTAAACCTTTTGCTTTCTAGTGCTGTACACATCCTGTaGTGCACACCCTTGTGCCCA +
Preference number: 3 (lower is better)
Translates to: ARVTAPSCYTLLNLLLSSAVHIL*CTPLCP
Trigger: TGGGCACAAGGGTGTGCACAACAGGATGTGTACAGC...ACTAGAAAGCAAAAGGTTTAACAATGTATAGCAGCTGGGCGCAGTGACTCGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CAA 90 bp GGATCCTGGGTGAATAGGAATAGGACTTGCCTGCCAGTGGGTGGAGCACTCCAGCTTCAGATTAGATTGTaGTGTGTTCATGATGGCCTC +
Preference number: 3 (lower is better)
Translates to: GSWVNRNRTCLPVGGALQLQIRL*CVHDGL
Trigger: GAGGCCATCATGAACACACAACAATCTAATCTGAAG...CTGGAGTGCTCCACCCACTGGCAGGCAAGTCCTATTCCTATTCACCCAGGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378426.5
3UTR CCA 72 bp CACAGGCAACTTGACCCAGTTAAGTACCACTGGCCTTaGAAACAAGTAGATGCGGGGAAAGGCGAAAGTGAG +
Preference number: 3 (lower is better)
Translates to: HRQLDPVKYHWP*KQVDAGKGESE
Trigger: CTCACTTTCGCCTTTCCCCGCATCTACTTGTTTCCAAGGCCAGTGGTACTTAACTGGGTCAAGTTGCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CAA 90 bp GCGCGAGTCACTGCGCCCAGCTGCTATACATTGTTAAACCTTTTGCTTTCTAGTACATCTTCACTGGGCTaGGAATGGAGCCTTTCCTGC +
Preference number: 3 (lower is better)
Translates to: ARVTAPSCYTLLNLLLSSTSSLG*EWSLSC
Trigger: GCAGGAAAGGCTCCATTCCAAGCCCAGTGAAGATGT...ACTAGAAAGCAAAAGGTTTAACAATGTATAGCAGCTGGGCGCAGTGACTCGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CAA 90 bp GTATTTATATCTACTTCAGTGGCTGGCACATGGTGGACCCTTGATAAAAGCTTCTGGGGTCTCGCCATCTaGCCCAGGTTGGTCTCAAAC +
Preference number: 3 (lower is better)
Translates to: VFISTSVAGTWWTLDKSFWGLAI*PRLVSN
Trigger: GTTTGAGACCAACCTGGGCAAGATGGCGAGACCCCA...GAAGCTTTTATCAAGGGTCCACCATGTGCCAGCCACTGAAGTAGATATAAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CAA 90 bp GGATCCTGGGTGAATAGGAATAGGACTTGCCTGCCAGTGGGTGGAGCACTCCAGAAACTTCAGATTAGATaGTTGTGTGTTCATGATGGC +
Preference number: 3 (lower is better)
Translates to: GSWVNRNRTCLPVGGALQKLQIR*LCVHDG
Trigger: GCCATCATGAACACACAACAATCTAATCTGAAGTTT...CTGGAGTGCTCCACCCACTGGCAGGCAAGTCCTATTCCTATTCACCCAGGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378426.5
3UTR-3UTR CAA 90 bp AAGATTCCATTTGATCCCAAGTTTTGTACCTCACATCTAGAAGCTCTGAAATATCCTGGGCCCACCTCCTaGCCCTACTGCCTTAGGCTA +
Preference number: 3 (lower is better)
Translates to: KIPFDPKFCTSHLEALKYPGPTS*PYCLRL
Trigger: TAGCCTAAGGCAGTAGGGCAAGGAGGTGGGCCCAGG...ATATTTCAGAGCTTCTAGATGTGAGGTACAAAACTTGGGATCAAATGGAATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CAA 90 bp AACAACTTTCCAGACCTCTACTATTCTAAAACACAAAGAGCATTACAGCTTGCTCTGTTGTGCACACCCTaGTGCCCAGGTGCACAGTTC +
Preference number: 3 (lower is better)
Translates to: NNFPDLYYSKTQRALQLALLCTP*CPGAQF
Trigger: GAACTGTGCACCTGGGCACAAGGGTGTGCACAACAG...AGCAAGCTGTAATGCTCTTTGTGTTTTAGAATAGTAGAGGTCTGGAAAGTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CAA 90 bp AAATCCAGTAAGATGACAGTTCGTATACCATCATCCATACCTTACACATCCTTGACATCTTCACTGGGCTaGGAATGGAGCCTTTCCTGC +
Preference number: 3 (lower is better)
Translates to: KSSKMTVRIPSSIPYTSLTSSLG*EWSLSC
Trigger: GCAGGAAAGGCTCCATTCCAAGCCCAGTGAAGATGT...CAAGGATGTGTAAGGTATGGATGATGGTATACGAACTGTCATCTTACTGGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CAA 90 bp GTATTTATATCTACTTCAGTGGCTGGCACATGGTGGACCCTTGATAAAAGCTTCAAGTTACAGGCACATTaGCACTCATCTGGGCTTTAC +
Preference number: 3 (lower is better)
Translates to: VFISTSVAGTWWTLDKSFKLQAH*HSSGLY
Trigger: GTAAAGCCCAGATGAGTGCAAATGTGCCTGTAACTT...GAAGCTTTTATCAAGGGTCCACCATGTGCCAGCCACTGAAGTAGATATAAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR GCA 72 bp ACCACAGTGCAGCATCGCTTCATTCTTTCCAACAGTTaGATAAGATCCTGTAGTATGGATGTGCTACACTTT +
Preference number: 3 (lower is better)
Translates to: TTVQHRFILSNS*IRSCSMDVLHF
Trigger: AAAGTGTAGCACATCCATACTACAGGATCTTATGCAACTGTTGGAAAGAATGAAGCGATGCTGCACTGTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CAA 90 bp AAGATTCCATTTGATCCCAAGTTTTGTACCTCACATCTAGAAGCTCTGAAATATATGATGGGGCAGTCATaGCGCAGTTTGGGAAACCAG +
Preference number: 3 (lower is better)
Translates to: KIPFDPKFCTSHLEALKYMMGQS*RSLGNQ
Trigger: CTGGTTTCCCAAACTGCGCAATGACTGCCCCATCAT...ATATTTCAGAGCTTCTAGATGTGAGGTACAAAACTTGGGATCAAATGGAATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CAA 90 bp AAGATTCCATTTGATCCCAAGTTTTGTACCTCACATCTAGAAGCTCTGAAATATAGGTCCACAGGCAACTaGACCCAGTTAAGTACCACT +
Preference number: 3 (lower is better)
Translates to: KIPFDPKFCTSHLEALKYRSTGN*TQLSTT
Trigger: AGTGGTACTTAACTGGGTCAAGTTGCCTGTGGACCT...ATATTTCAGAGCTTCTAGATGTGAGGTACAAAACTTGGGATCAAATGGAATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CAA 90 bp CAGCATCGCTTCATTCTTTCCAACAGTTGCATAAGATCCTGTAGTATGGATGTGAGGCAATGTTTCTTCTaGCTTTCCTCTAAAAAGGAA +
Preference number: 3 (lower is better)
Translates to: QHRFILSNSCIRSCSMDVRQCFF*LSSKKE
Trigger: TTCCTTTTTAGAGGAAAGCAAGAAGAAACATTGCCT...CACATCCATACTACAGGATCTTATGCAACTGTTGGAAAGAATGAAGCGATGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CAA 90 bp AACAACTTTCCAGACCTCTACTATTCTAAAACACAAAGAGCATTACAGCTTGCTAAGTTACAGGCACATTaGCACTCATCTGGGCTTTAC +
Preference number: 3 (lower is better)
Translates to: NNFPDLYYSKTQRALQLAKLQAH*HSSGLY
Trigger: GTAAAGCCCAGATGAGTGCAAATGTGCCTGTAACTT...AGCAAGCTGTAATGCTCTTTGTGTTTTAGAATAGTAGAGGTCTGGAAAGTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR TCA 72 bp ACCGTATCTTTAACAGAGCGGACAAATCCAGTAAGATaGCAGTTCGTATACCATCATCCATACCTTACACAT +
Preference number: 3 (lower is better)
Translates to: TVSLTERTNPVR*QFVYHHPYLTH
Trigger: ATGTGTAAGGTATGGATGATGGTATACGAACTGTCATCTTACTGGATTTGTCCGCTCTGTTAAAGATACGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR CCA 72 bp ATACCTTACACATCCTTGTATTTATATCTACTTCAGTaGCTGGCACATGGTGGACCCTTGATAAAAGCTTCT +
Preference number: 3 (lower is better)
Translates to: IPYTSLYLYLLQ*LAHGGPLIKAS
Trigger: AGAAGCTTTTATCAAGGGTCCACCATGTGCCAGCCACTGAAGTAGATATAAATACAAGGATGTGTAAGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CAA 90 bp AAATCCAGTAAGATGACAGTTCGTATACCATCATCCATACCTTACACATCCTTGAGGCAATGTTTCTTCTaGCTTTCCTCTAAAAAGGAA +
Preference number: 3 (lower is better)
Translates to: KSSKMTVRIPSSIPYTSLRQCFF*LSSKKE
Trigger: TTCCTTTTTAGAGGAAAGCAAGAAGAAACATTGCCT...CAAGGATGTGTAAGGTATGGATGATGGTATACGAACTGTCATCTTACTGGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR-3UTR CAA 90 bp AAGATTCCATTTGATCCCAAGTTTTGTACCTCACATCTAGAAGCTCTGAAATATTGGCTAAACAGGGAGTaGATGCTGAATTACTTCACA +
Preference number: 3 (lower is better)
Translates to: KIPFDPKFCTSHLEALKYWLNRE*MLNYFT
Trigger: TGTGAAGTAATTCAGCATCAACTCCCTGTTTAGCCA...ATATTTCAGAGCTTCTAGATGTGAGGTACAAAACTTGGGATCAAATGGAATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378426.5
3UTR TCA 72 bp CAGATCTTAAATTGGTTAGTGAATCAAGATTCCATTTaGTCCCAAGTTTTGTACCTCACATCTAGAAGCTCT +
Preference number: 3 (lower is better)
Translates to: QILNWLVNQDSI*SQVLYLTSRSS
Trigger: AGAGCTTCTAGATGTGAGGTACAAAACTTGGGATCAAATGGAATCTTGATTCACTAACCAATTTAAGATCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp CTGGGTCCTGCCTGTCCACTGGTCACTCGAGTCACCATTCTCCAGCTCCCCACAAGCCAGGTGCTCACCTaGCGGGCGCGAGGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: LGPACPLVTRVTILQLPTSQVLT*RARGLH
Trigger: GTGCAGCCCTCGCGCCCGCCAGGTGAGCACCTGGCT...TGTGGGGAGCTGGAGAATGGTGACTCGAGTGACCAGTGGACAGGCAGGACCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378426.5
CDS-3UTR TCA 90 bp CTGGGTCCTGCCTGTCCACTGGTCACTCGAGTCACCATTCTCCAGCTCCCCACAGTGGAGCACTCCAGGTaGGCCTCTGGCACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LGPACPLVTRVTILQLPTVEHSR*ASGTGL
Trigger: CAGGCCTGTGCCAGAGGCTCACCTGGAGTGCTCCAC...TGTGGGGAGCTGGAGAATGGTGACTCGAGTGACCAGTGGACAGGCAGGACCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp CCTATGATGGGGCAGTCATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGCTAGTCCTCGGGGCATaGAGGCCTTGGCCACCTCCC +
Preference number: 4 (lower is better)
Translates to: PMMGQSLRSLGNQQEELRLVLGA*RPWPPP
Trigger: GGGAGGTGGCCAAGGCCTTCATGCCCCGAGGACTAG...CCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAATGACTGCCCCATCATAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327877.10
CDS-3UTR TCA 90 bp CTGGGTCCTGCCTGTCCACTGGTCACTCGAGTCACCATTCTCCAGCTCCCCACAACGGACCACTGCCTATaGTGGGGCAGTCATTGCGCA +
Preference number: 4 (lower is better)
Translates to: LGPACPLVTRVTILQLPTTDHCL*WGSHCA
Trigger: TGCGCAATGACTGCCCCATCATAGGCAGTGGTCCGT...TGTGGGGAGCTGGAGAATGGTGACTCGAGTGACCAGTGGACAGGCAGGACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR GCA 90 bp GGCCGACTCCACGGACCACTGCCTATGATGGGGCAGTCATTGCGCAGTTTGGGAAAGCTCCCCTGCTCCTaGCTGACATCCCCGCTTGTA +
Preference number: 4 (lower is better)
Translates to: GRLHGPLPMMGQSLRSLGKLPCS*LTSPLV
Trigger: TACAAGCGGGGATGTCAGGCAGGAGCAGGGGAGCTT...TCCCAAACTGCGCAATGACTGCCCCATCATAGGCAGTGGTCCGTGGAGTCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp ATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGAGTGGATGACTTTAGGGTGTACTCGGCGCAGTTaGGGCGCGCCGCTAGCTCCG +
Preference number: 4 (lower is better)
Translates to: IAQFGKPAGGTQEWMTLGCTRRS*GAPLAP
Trigger: CGGAGCTAGCGGCGCGCCTCAACTGCGCCGAGTACA...CCCTAAAGTCATCCACTCCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR GCA 90 bp CCTATGATGGGGCAGTCATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGTGCTGGCCTGGGTCCTaGCTGTCCACTGGTCACTCG +
Preference number: 4 (lower is better)
Translates to: PMMGQSLRSLGNQQEELRCWPGS*LSTGHS
Trigger: CGAGTGACCAGTGGACAGGCAGGACCCAGGCCAGCA...CCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAATGACTGCCCCATCATAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR GCA 90 bp GCGCGAGTCACTGCGCCCAGCTGCTATACATTGTTAAACCTTTTGCTTTCTAGTAGGCCCCGAGCCAGGTaGTCACCTGGCGGGCGCGAG +
Preference number: 4 (lower is better)
Translates to: ARVTAPSCYTLLNLLLSSRPRAR*SPGGRE
Trigger: CTCGCGCCCGCCAGGTGAGCACCTGGCTCGGGGCCT...ACTAGAAAGCAAAAGGTTTAACAATGTATAGCAGCTGGGCGCAGTGACTCGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378426.5
CDS-3UTR CCA 90 bp AGGCAACTTGACCCAGTTAAGTACCACTGGCCTTGGAAACAAGTAGATGCGGGGGCGAGTAGGCCGCGGTaGAAGGAGAGCACCTCGCGG +
Preference number: 4 (lower is better)
Translates to: RQLDPVKYHWPWKQVDAGASRPR*KESTSR
Trigger: CCGCGAGGTGCTCTCCTTCCACCGCGGCCTACTCGC...CCCCGCATCTACTTGTTTCCAAGGCCAGTGGTACTTAACTGGGTCAAGTTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp GGATCCTGGGTGAATAGGAATAGGACTTGCCTGCCAGTGGGTGGAGCACTCCAGAGCCTGCCGAGTAGCTaGGATTACAGGCACGCGCCA +
Preference number: 4 (lower is better)
Translates to: GSWVNRNRTCLPVGGALQSLPSS*DYRHAP
Trigger: TGGCGCGTGCCTGTAATCCCAGCTACTCGGCAGGCT...CTGGAGTGCTCCACCCACTGGCAGGCAAGTCCTATTCCTATTCACCCAGGATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp CACAGGCAACTTGACCCAGTTAAGTACCACTGGCCTTGGAAACAAGTAGATGCGTGTACTCGGCGCAGTTaGGGCGCGCCGCTAGCTCCG +
Preference number: 4 (lower is better)
Translates to: HRQLDPVKYHWPWKQVDACTRRS*GAPLAP
Trigger: CGGAGCTAGCGGCGCGCCTCAACTGCGCCGAGTACA...CGCATCTACTTGTTTCCAAGGCCAGTGGTACTTAACTGGGTCAAGTTGCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp ACTTTAACAGTGCTGCTGTACACATCCTGTTGTGCACACCCTTGTGCCCAGGTGGTGGAGCACTCCAGGTaGGCCTCTGGCACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: TLTVLLYTSCCAHPCAQVVEHSR*ASGTGL
Trigger: CAGGCCTGTGCCAGAGGCTCACCTGGAGTGCTCCAC...CACCTGGGCACAAGGGTGTGCACAACAGGATGTGTACAGCAGCACTGTTAAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp CTGGGTCCTGCCTGTCCACTGGTCACTCGAGTCACCATTCTCCAGCTCCCCACACAGTCAAATATTCACTaGGCATGTGAGGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LGPACPLVTRVTILQLPTQSNIH*ACEGQA
Trigger: GGCCTGGCCCTCACATGCTCAGTGAATATTTGACTG...TGTGGGGAGCTGGAGAATGGTGACTCGAGTGACCAGTGGACAGGCAGGACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp GCAGTCATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGAGTGGATGACTGGGGAAAGGCGAAAGTaGGGCCGACTCCACGGACCA +
Preference number: 4 (lower is better)
Translates to: AVIAQFGKPAGGTQEWMTGERRK*GRLHGP
Trigger: TGGTCCGTGGAGTCGGCCTCACTTTCGCCTTTCCCC...AGTCATCCACTCCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAATGACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR GCA 90 bp ATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGAGTGGATGACTTTAGGGCGGCCGACGAAACCCTaGAGGCAGCTGCGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: IAQFGKPAGGTQEWMTLGRPTKP*RQLRSS
Trigger: ACTGCTGCGCAGCTGCCTGCAGGGTTTCGTCGGCCG...CCCTAAAGTCATCCACTCCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR GCA 90 bp CTGGGTCCTGCCTGTCCACTGGTCACTCGAGTCACCATTCTCCAGCTCCCCACAACCTCCTTGCCCTACTaGCTTAGGCTACTCCAACCT +
Preference number: 4 (lower is better)
Translates to: LGPACPLVTRVTILQLPTTSLPY*LRLLQP
Trigger: AGGTTGGAGTAGCCTAAGGCAGTAGGGCAAGGAGGT...TGTGGGGAGCTGGAGAATGGTGACTCGAGTGACCAGTGGACAGGCAGGACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR GCA 90 bp CCTATGATGGGGCAGTCATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGCTGGGCCCACCTCCTTaGCCTACTGCCTTAGGCTAC +
Preference number: 4 (lower is better)
Translates to: PMMGQSLRSLGNQQEELRLGPPP*PTALGY
Trigger: GTAGCCTAAGGCAGTAGGGCAAGGAGGTGGGCCCAG...CCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAATGACTGCCCCATCATAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR GCA 90 bp CCCATTCTACAGATGACATCCTTGGTGGGCGGCTGGATAGGCACACATCTTCACTGCTGGCCTGGGTCCTaGCTGTCCACTGGTCACTCG +
Preference number: 4 (lower is better)
Translates to: PILQMTSLVGGWIGTHLHCWPGS*LSTGHS
Trigger: CGAGTGACCAGTGGACAGGCAGGACCCAGGCCAGCA...GTGAAGATGTGTGCCTATCCAGCCGCCCACCAAGGATGTCATCTGTAGAATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR GCA 90 bp GGATCCTGGGTGAATAGGAATAGGACTTGCCTGCCAGTGGGTGGAGCACTCCAGAAGCTCCCCTGCTCCTaGCTGACATCCCCGCTTGTA +
Preference number: 4 (lower is better)
Translates to: GSWVNRNRTCLPVGGALQKLPCS*LTSPLV
Trigger: TACAAGCGGGGATGTCAGGCAGGAGCAGGGGAGCTT...CTGGAGTGCTCCACCCACTGGCAGGCAAGTCCTATTCCTATTCACCCAGGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR GCA 90 bp CTGGGTCCTGCCTGTCCACTGGTCACTCGAGTCACCATTCTCCAGCTCCCCACATTGTGCACACCCTTGTaGCCAGGTGCACAGTTCTGT +
Preference number: 4 (lower is better)
Translates to: LGPACPLVTRVTILQLPTLCTPL*PGAQFC
Trigger: ACAGAACTGTGCACCTGGGCACAAGGGTGTGCACAA...TGTGGGGAGCTGGAGAATGGTGACTCGAGTGACCAGTGGACAGGCAGGACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR CAA 72 bp CGACTCCACGGACCACTGCCTATGATGGGGCAGTCATaGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGG +
Preference number: 4 (lower is better)
Translates to: RLHGPLPMMGQS*RSLGNQQEELR
Trigger: CCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAATGACTGCCCCATCATAGGCAGTGGTCCGTGGAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR GCA 90 bp CTGGGTCCTGCCTGTCCACTGGTCACTCGAGTCACCATTCTCCAGCTCCCCACAAATAGGAATAGGACTTaGCTGCCAGTGGGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: LGPACPLVTRVTILQLPTNRNRT*LPVGGA
Trigger: TGCTCCACCCACTGGCAGGCAAGTCCTATTCCTATT...TGTGGGGAGCTGGAGAATGGTGACTCGAGTGACCAGTGGACAGGCAGGACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp GGATCCTGGGTGAATAGGAATAGGACTTGCCTGCCAGTGGGTGGAGCACTCCAGTCACTGGGCTTGGAATaGAGCCTTTCCTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GSWVNRNRTCLPVGGALQSLGLE*SLSCRQ
Trigger: CTGCCTGCAGGAAAGGCTCCATTCCAAGCCCAGTGA...CTGGAGTGCTCCACCCACTGGCAGGCAAGTCCTATTCCTATTCACCCAGGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp GGATCCTGGGTGAATAGGAATAGGACTTGCCTGCCAGTGGGTGGAGCACTCCAGTCCTTGGTGGGCGGCTaGATAGGCACACATCTTCAC +
Preference number: 4 (lower is better)
Translates to: GSWVNRNRTCLPVGGALQSLVGG*IGTHLH
Trigger: GTGAAGATGTGTGCCTATCCAGCCGCCCACCAAGGA...CTGGAGTGCTCCACCCACTGGCAGGCAAGTCCTATTCCTATTCACCCAGGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp GGCCGACTCCACGGACCACTGCCTATGATGGGGCAGTCATTGCGCAGTTTGGGAGTGGCTGGCACATGGTaGACCCTTGATAAAAGCTTC +
Preference number: 4 (lower is better)
Translates to: GRLHGPLPMMGQSLRSLGVAGTW*TLDKSF
Trigger: GAAGCTTTTATCAAGGGTCCACCATGTGCCAGCCAC...TCCCAAACTGCGCAATGACTGCCCCATCATAGGCAGTGGTCCGTGGAGTCGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp GCAGTCATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGAGTGGATGACTAGCCTGCCGAGTAGCTaGGATTACAGGCACGCGCCA +
Preference number: 4 (lower is better)
Translates to: AVIAQFGKPAGGTQEWMTSLPSS*DYRHAP
Trigger: TGGCGCGTGCCTGTAATCCCAGCTACTCGGCAGGCT...AGTCATCCACTCCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAATGACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp GGATCCTGGGTGAATAGGAATAGGACTTGCCTGCCAGTGGGTGGAGCACTCCAGCAGGCTGGAATGCAGTaGTGTGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: GSWVNRNRTCLPVGGALQQAGMQ*CDLGSL
Trigger: CAGTGAGCCGAGATCACACCACTGCATTCCAGCCTG...CTGGAGTGCTCCACCCACTGGCAGGCAAGTCCTATTCCTATTCACCCAGGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR CAA 72 bp AACCCCTGCCCTCCACCCATTCTACAGATGACATCCTaGGTGGGCGGCTGGATAGGCACACATCTTCACTGG +
Preference number: 4 (lower is better)
Translates to: NPCPPPILQMTS*VGGWIGTHLHW
Trigger: CCAGTGAAGATGTGTGCCTATCCAGCCGCCCACCAAGGATGTCATCTGTAGAATGGGTGGAGGGCAGGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR GCA 90 bp GCAGTCATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGAGTGGATGACTAACCCTGCAGGCAGCTaGGCAGCAGTAACAGGCAGT +
Preference number: 4 (lower is better)
Translates to: AVIAQFGKPAGGTQEWMTNPAGS*AAVTGS
Trigger: ACTGCCTGTTACTGCTGCGCAGCTGCCTGCAGGGTT...AGTCATCCACTCCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAATGACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR GCA 90 bp ATGGGGCAGTCATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGAGTGGAGTGATCCGCCCACAGTaGTGGGATTACAGGCGTGAA +
Preference number: 4 (lower is better)
Translates to: MGQSLRSLGNQQEELRSGVIRPQ*WDYRRE
Trigger: TTCACGCCTGTAATCCCAGCACTGTGGGCGGATCAC...TCCACTCCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAATGACTGCCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR GCA 90 bp CCTATGATGGGGCAGTCATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGACAGGCGCGAGTCACTaGGCCCAGCTGCTATACATT +
Preference number: 4 (lower is better)
Translates to: PMMGQSLRSLGNQQEELRTGASH*AQLLYI
Trigger: AATGTATAGCAGCTGGGCGCAGTGACTCGCGCCTGT...CCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAATGACTGCCCCATCATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR GCA 90 bp CCCATTCTACAGATGACATCCTTGGTGGGCGGCTGGATAGGCACACATCTTCACGTGATCTCGGCTCACTaGAACCTCCACCTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: PILQMTSLVGGWIGTHLHVISAH*NLHLPS
Trigger: ACTGGGGAGGTGGAGGTTGCAGTGAGCCGAGATCAC...GTGAAGATGTGTGCCTATCCAGCCGCCCACCAAGGATGTCATCTGTAGAATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp CTGGGTCCTGCCTGTCCACTGGTCACTCGAGTCACCATTCTCCAGCTCCCCACATTATATCTACTTCAGTaGCTGGCACATGGTGGACCC +
Preference number: 4 (lower is better)
Translates to: LGPACPLVTRVTILQLPTLYLLQ*LAHGGP
Trigger: GGGTCCACCATGTGCCAGCCACTGAAGTAGATATAA...TGTGGGGAGCTGGAGAATGGTGACTCGAGTGACCAGTGGACAGGCAGGACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp GGATCCTGGGTGAATAGGAATAGGACTTGCCTGCCAGTGGGTGGAGCACTCCAGCCACATTGGCCAGGTTaGTCTCAAACTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: GSWVNRNRTCLPVGGALQPHWPG*SQTPDL
Trigger: GAGGTCAGGAGTTTGAGACCAACCTGGCCAATGTGG...CTGGAGTGCTCCACCCACTGGCAGGCAAGTCCTATTCCTATTCACCCAGGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp ATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGAGTGGATGACTTTAGGGCTTGCGCTCTGGGTCTaGGACAGGAACGGGGATGAG +
Preference number: 4 (lower is better)
Translates to: IAQFGKPAGGTQEWMTLGLALWV*DRNGDE
Trigger: CTCATCCCCGTTCCTGTCCCAGACCCAGAGCGCAAG...CCCTAAAGTCATCCACTCCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378426.5
CDS-3UTR TCA 90 bp AGGCAACTTGACCCAGTTAAGTACCACTGGCCTTGGAAACAAGTAGATGCGGGGTCTTCCTCGGGGATGTaGACAGCCCAGTCAGACGTC +
Preference number: 4 (lower is better)
Translates to: RQLDPVKYHWPWKQVDAGSSSGM*TAQSDV
Trigger: GACGTCTGACTGGGCTGTTCACATCCCCGAGGAAGA...CCCCGCATCTACTTGTTTCCAAGGCCAGTGGTACTTAACTGGGTCAAGTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp GGATCCTGGGTGAATAGGAATAGGACTTGCCTGCCAGTGGGTGGAGCACTCCAGCACTTCCAGTCGATTTaGGAGCTCTTCAGGCAACAC +
Preference number: 4 (lower is better)
Translates to: GSWVNRNRTCLPVGGALQHFQSI*ELFRQH
Trigger: GTGTTGCCTGAAGAGCTCTCAAATCGACTGGAAGTG...CTGGAGTGCTCCACCCACTGGCAGGCAAGTCCTATTCCTATTCACCCAGGATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp ATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGAGTGGATGACTTTAGGGACGGACCACTGCCTATaGTGGGGCAGTCATTGCGCA +
Preference number: 4 (lower is better)
Translates to: IAQFGKPAGGTQEWMTLGTDHCL*WGSHCA
Trigger: TGCGCAATGACTGCCCCATCATAGGCAGTGGTCCGT...CCCTAAAGTCATCCACTCCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR GCA 90 bp CCTATGATGGGGCAGTCATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGACCTCCTTGCCCTACTaGCTTAGGCTACTCCAACCT +
Preference number: 4 (lower is better)
Translates to: PMMGQSLRSLGNQQEELRTSLPY*LRLLQP
Trigger: AGGTTGGAGTAGCCTAAGGCAGTAGGGCAAGGAGGT...CCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAATGACTGCCCCATCATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR GCA 90 bp GGATCCTGGGTGAATAGGAATAGGACTTGCCTGCCAGTGGGTGGAGCACTCCAGCACCAAATAAACCCCTaGCCTCCACCCATTCTACAG +
Preference number: 4 (lower is better)
Translates to: GSWVNRNRTCLPVGGALQHQINP*PPPILQ
Trigger: CTGTAGAATGGGTGGAGGGCAGGGGTTTATTTGGTG...CTGGAGTGCTCCACCCACTGGCAGGCAAGTCCTATTCCTATTCACCCAGGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR GCA 90 bp CTGGGTCCTGCCTGTCCACTGGTCACTCGAGTCACCATTCTCCAGCTCCCCACATGTCTTAGAGATCACTaGATGACCACAGTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: LGPACPLVTRVTILQLPTCLRDH*MTTVQH
Trigger: ATGCTGCACTGTGGTCATGCAGTGATCTCTAAGACA...TGTGGGGAGCTGGAGAATGGTGACTCGAGTGACCAGTGGACAGGCAGGACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp ATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGAGTGGATGACTTTAGGGACCATGTCTCCCACTTaGAACCAGGAGGTTGCGGGG +
Preference number: 4 (lower is better)
Translates to: IAQFGKPAGGTQEWMTLGTMSPT*NQEVAG
Trigger: CCCCGCAACCTCCTGGTTCCAAGTGGGAGACATGGT...CCCTAAAGTCATCCACTCCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp CCCATTCTACAGATGACATCCTTGGTGGGCGGCTGGATAGGCACACATCTTCACGTCCTGCCTGTCCACTaGTCACTCGAGTCACCATTC +
Preference number: 4 (lower is better)
Translates to: PILQMTSLVGGWIGTHLHVLPVH*SLESPF
Trigger: GAATGGTGACTCGAGTGACCAGTGGACAGGCAGGAC...GTGAAGATGTGTGCCTATCCAGCCGCCCACCAAGGATGTCATCTGTAGAATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp CCCATTCTACAGATGACATCCTTGGTGGGCGGCTGGATAGGCACACATCTTCACTCACTGGGCTTGGAATaGAGCCTTTCCTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: PILQMTSLVGGWIGTHLHSLGLE*SLSCRQ
Trigger: CTGCCTGCAGGAAAGGCTCCATTCCAAGCCCAGTGA...GTGAAGATGTGTGCCTATCCAGCCGCCCACCAAGGATGTCATCTGTAGAATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp CACATCTTCACTGGGCTTGGAATGGAGCCTTTCCTGCAGGCAGTGAGGAACATGTCCTTGGTGGGCGGCTaGATAGGCACACATCTTCAC +
Preference number: 4 (lower is better)
Translates to: HIFTGLGMEPFLQAVRNMSLVGG*IGTHLH
Trigger: GTGAAGATGTGTGCCTATCCAGCCGCCCACCAAGGA...CATGTTCCTCACTGCCTGCAGGAAAGGCTCCATTCCAAGCCCAGTGAAGATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp CACAGGCAACTTGACCCAGTTAAGTACCACTGGCCTTGGAAACAAGTAGATGCGTCTTCCTCGGGGATGTaGACAGCCCAGTCAGACGTC +
Preference number: 4 (lower is better)
Translates to: HRQLDPVKYHWPWKQVDASSSGM*TAQSDV
Trigger: GACGTCTGACTGGGCTGTTCACATCCCCGAGGAAGA...CGCATCTACTTGTTTCCAAGGCCAGTGGTACTTAACTGGGTCAAGTTGCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp ATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGAGTGGATGACTTTAGGGCACCCATTCTACAGATaGCATCCTTGGTGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: IAQFGKPAGGTQEWMTLGHPFYR*HPWWAA
Trigger: AGCCGCCCACCAAGGATGTCATCTGTAGAATGGGTG...CCCTAAAGTCATCCACTCCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR GCA 90 bp GGCCGACTCCACGGACCACTGCCTATGATGGGGCAGTCATTGCGCAGTTTGGGAGACTTTCACAGAACATaGCTGATTTTTGTTGACGGG +
Preference number: 4 (lower is better)
Translates to: GRLHGPLPMMGQSLRSLGDFHRT*LIFVDG
Trigger: CCCGTCAACAAAAATCAGGCATGTTCTGTGAAAGTC...TCCCAAACTGCGCAATGACTGCCCCATCATAGGCAGTGGTCCGTGGAGTCGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR GCA 90 bp AGGCAACTTGACCCAGTTAAGTACCACTGGCCTTGGAAACAAGTAGATGCGGGGACAGGCGCGAGTCACTaGGCCCAGCTGCTATACATT +
Preference number: 4 (lower is better)
Translates to: RQLDPVKYHWPWKQVDAGTGASH*AQLLYI
Trigger: AATGTATAGCAGCTGGGCGCAGTGACTCGCGCCTGT...CCCCGCATCTACTTGTTTCCAAGGCCAGTGGTACTTAACTGGGTCAAGTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp CACAGGCAACTTGACCCAGTTAAGTACCACTGGCCTTGGAAACAAGTAGATGCGACAGCCTTGACCACCTaGGCTCAAGGGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: HRQLDPVKYHWPWKQVDATALTT*AQGILP
Trigger: TGGGAGGATCCCTTGAGCCCAGGTGGTCAAGGCTGT...CGCATCTACTTGTTTCCAAGGCCAGTGGTACTTAACTGGGTCAAGTTGCCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp CACATCTTCACTGGGCTTGGAATGGAGCCTTTCCTGCAGGCAGTGAGGAACATGGTGAGGGCCAGGCCCTaGGAGCTTACTTTTCAAAAG +
Preference number: 4 (lower is better)
Translates to: HIFTGLGMEPFLQAVRNMVRARP*ELTFQK
Trigger: CTTTTGAAAAGTAAGCTCCCAGGGCCTGGCCCTCAC...CATGTTCCTCACTGCCTGCAGGAAAGGCTCCATTCCAAGCCCAGTGAAGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp ATGGGGCAGTCATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGAGTGGAAGTCATTGCGCAGTTTaGGAAACCAGCAGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: MGQSLRSLGNQQEELRSGSHCAV*ETSRRN
Trigger: GTTCCTCCTGCTGGTTTCCCAAACTGCGCAATGACT...TCCACTCCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAATGACTGCCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp ATGGGGCAGTCATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGAGTGGAGTGGCTGGCACATGGTaGACCCTTGATAAAAGCTTC +
Preference number: 4 (lower is better)
Translates to: MGQSLRSLGNQQEELRSGVAGTW*TLDKSF
Trigger: GAAGCTTTTATCAAGGGTCCACCATGTGCCAGCCAC...TCCACTCCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAATGACTGCCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp CCCATTCTACAGATGACATCCTTGGTGGGCGGCTGGATAGGCACACATCTTCACCCACATTGGCCAGGTTaGTCTCAAACTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: PILQMTSLVGGWIGTHLHPHWPG*SQTPDL
Trigger: GAGGTCAGGAGTTTGAGACCAACCTGGCCAATGTGG...GTGAAGATGTGTGCCTATCCAGCCGCCCACCAAGGATGTCATCTGTAGAATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp GCGCGAGTCACTGCGCCCAGCTGCTATACATTGTTAAACCTTTTGCTTTCTAGTAGGACACTTGCGCTCTaGGTCTGGGACAGGAACGGG +
Preference number: 4 (lower is better)
Translates to: ARVTAPSCYTLLNLLLSSRTLAL*VWDRNG
Trigger: CCCGTTCCTGTCCCAGACCCAGAGCGCAAGTGTCCT...ACTAGAAAGCAAAAGGTTTAACAATGTATAGCAGCTGGGCGCAGTGACTCGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378426.5
CDS-3UTR TCA 90 bp GCAGTCATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGAGTGGATGACTATGCCTGATTTTTGTTaGCGGGCAACCTCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: AVIAQFGKPAGGTQEWMTMPDFC*RATSGL
Trigger: AAGGCCTGAGGTTGCCCGTCAACAAAAATCAGGCAT...AGTCATCCACTCCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAATGACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000327877.10
CDS-3UTR TCA 90 bp GCAGTCATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGAGTGGATGACTTGGCAATTCTGTTCCTaGAGGTCCACAGGCAACTTG +
Preference number: 4 (lower is better)
Translates to: AVIAQFGKPAGGTQEWMTWQFCS*RSTGNL
Trigger: CAAGTTGCCTGTGGACCTTCAGGAACAGAATTGCCA...AGTCATCCACTCCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAATGACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp CACAGGCAACTTGACCCAGTTAAGTACCACTGGCCTTGGAAACAAGTAGATGCGACACCATCATCTGCCTaGACTCACCTCAGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: HRQLDPVKYHWPWKQVDATPSSA*THLRPS
Trigger: GGAAGGCCTGAGGTGAGTTCAGGCAGATGATGGTGT...CGCATCTACTTGTTTCCAAGGCCAGTGGTACTTAACTGGGTCAAGTTGCCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378426.5
CDS-3UTR GCA 90 bp CACATCTTCACTGGGCTTGGAATGGAGCCTTTCCTGCAGGCAGTGAGGAACATGCGGCAGTTTCCCCAGTaGACATCTCCATTTCTGTTG +
Preference number: 4 (lower is better)
Translates to: HIFTGLGMEPFLQAVRNMRQFPQ*TSPFLL
Trigger: CAACAGAAATGGAGATGTGCACTGGGGAAACTGCCG...CATGTTCCTCACTGCCTGCAGGAAAGGCTCCATTCCAAGCCCAGTGAAGATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR GCA 90 bp AGGCAACTTGACCCAGTTAAGTACCACTGGCCTTGGAAACAAGTAGATGCGGGGTTGTGCACACCCTTGTaGCCAGGTGCACAGTTCTGT +
Preference number: 4 (lower is better)
Translates to: RQLDPVKYHWPWKQVDAGLCTPL*PGAQFC
Trigger: ACAGAACTGTGCACCTGGGCACAAGGGTGTGCACAA...CCCCGCATCTACTTGTTTCCAAGGCCAGTGGTACTTAACTGGGTCAAGTTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR GCA 90 bp ATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGAGTGGATGACTTTAGGGGTACACATCCTGTTGTaGACACCCTTGTGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: IAQFGKPAGGTQEWMTLGVHILL*TPLCPG
Trigger: ACCTGGGCACAAGGGTGTGCACAACAGGATGTGTAC...CCCTAAAGTCATCCACTCCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp CACATCTTCACTGGGCTTGGAATGGAGCCTTTCCTGCAGGCAGTGAGGAACATGCATCTTCACTGGGCTTaGAATGGAGCCTTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: HIFTGLGMEPFLQAVRNMHLHWA*NGAFPA
Trigger: TGCAGGAAAGGCTCCATTCCAAGCCCAGTGAAGATG...CATGTTCCTCACTGCCTGCAGGAAAGGCTCCATTCCAAGCCCAGTGAAGATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp CCCATTCTACAGATGACATCCTTGGTGGGCGGCTGGATAGGCACACATCTTCACGGCACACATCTTCACTaGGCTTGGAATGGAGCCTTT +
Preference number: 4 (lower is better)
Translates to: PILQMTSLVGGWIGTHLHGTHLH*AWNGAF
Trigger: AAAGGCTCCATTCCAAGCCCAGTGAAGATGTGTGCC...GTGAAGATGTGTGCCTATCCAGCCGCCCACCAAGGATGTCATCTGTAGAATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp ACTTTAACAGTGCTGCTGTACACATCCTGTTGTGCACACCCTTGTGCCCAGGTGCGATCAACCACGAAGTaGTCGCAGGAGTTGATGAGA +
Preference number: 4 (lower is better)
Translates to: TLTVLLYTSCCAHPCAQVRSTTK*SQELMR
Trigger: TCTCATCAACTCCTGCGATCACTTCGTGGTTGATCG...CACCTGGGCACAAGGGTGTGCACAACAGGATGTGTACAGCAGCACTGTTAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp CACATCTTCACTGGGCTTGGAATGGAGCCTTTCCTGCAGGCAGTGAGGAACATGACAGAAAAGGATGTCTaGGATGGAAGCCATGCTGAC +
Preference number: 4 (lower is better)
Translates to: HIFTGLGMEPFLQAVRNMTEKDV*DGSHAD
Trigger: GTCAGCATGGCTTCCATCTCAGACATCCTTTTCTGT...CATGTTCCTCACTGCCTGCAGGAAAGGCTCCATTCCAAGCCCAGTGAAGATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp CACAGGCAACTTGACCCAGTTAAGTACCACTGGCCTTGGAAACAAGTAGATGCGCTTGGGGATCCTGGGTaGATAGGAATAGGACTTGCC +
Preference number: 4 (lower is better)
Translates to: HRQLDPVKYHWPWKQVDALGDPG*IGIGLA
Trigger: GGCAAGTCCTATTCCTATTCACCCAGGATCCCCAAG...CGCATCTACTTGTTTCCAAGGCCAGTGGTACTTAACTGGGTCAAGTTGCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp CTGGGTCCTGCCTGTCCACTGGTCACTCGAGTCACCATTCTCCAGCTCCCCACAGTAAGAATCATTAAGTaGAGAACACAAACCTCAGTG +
Preference number: 4 (lower is better)
Translates to: LGPACPLVTRVTILQLPTVRIIK*RTQTSV
Trigger: CACTGAGGTTTGTGTTCTTCACTTAATGATTCTTAC...TGTGGGGAGCTGGAGAATGGTGACTCGAGTGACCAGTGGACAGGCAGGACCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378426.5
CDS-3UTR GCA 90 bp GGCCGACTCCACGGACCACTGCCTATGATGGGGCAGTCATTGCGCAGTTTGGGACACCTCTTGTTCTTCTaGTTGAAGATATATCTCTTG +
Preference number: 4 (lower is better)
Translates to: GRLHGPLPMMGQSLRSLGHLLFF*LKIYLL
Trigger: CAAGAGATATATCTTCAAGCAGAAGAACAAGAGGTG...TCCCAAACTGCGCAATGACTGCCCCATCATAGGCAGTGGTCCGTGGAGTCGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR GCA 90 bp AGGCAACTTGACCCAGTTAAGTACCACTGGCCTTGGAAACAAGTAGATGCGGGGAATAGGAATAGGACTTaGCTGCCAGTGGGTGGAGCA +
Preference number: 4 (lower is better)
Translates to: RQLDPVKYHWPWKQVDAGNRNRT*LPVGGA
Trigger: TGCTCCACCCACTGGCAGGCAAGTCCTATTCCTATT...CCCCGCATCTACTTGTTTCCAAGGCCAGTGGTACTTAACTGGGTCAAGTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp AGGCAACTTGACCCAGTTAAGTACCACTGGCCTTGGAAACAAGTAGATGCGGGGCAGCCTTGGGGATCCTaGGTGAATAGGAATAGGACT +
Preference number: 4 (lower is better)
Translates to: RQLDPVKYHWPWKQVDAGQPWGS*VNRNRT
Trigger: AGTCCTATTCCTATTCACCCAGGATCCCCAAGGCTG...CCCCGCATCTACTTGTTTCCAAGGCCAGTGGTACTTAACTGGGTCAAGTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp AGGCAACTTGACCCAGTTAAGTACCACTGGCCTTGGAAACAAGTAGATGCGGGGAAGTACCACTGGCCTTaGAAACAAGTAGATGCGGGG +
Preference number: 4 (lower is better)
Translates to: RQLDPVKYHWPWKQVDAGKYHWP*KQVDAG
Trigger: CCCCGCATCTACTTGTTTCCAAGGCCAGTGGTACTT...CCCCGCATCTACTTGTTTCCAAGGCCAGTGGTACTTAACTGGGTCAAGTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp GGCCGACTCCACGGACCACTGCCTATGATGGGGCAGTCATTGCGCAGTTTGGGACTAAGTTTCCTCGTTTaGAAGAGTTGTGAGATGAAT +
Preference number: 4 (lower is better)
Translates to: GRLHGPLPMMGQSLRSLGLSFLV*KSCEMN
Trigger: ATTCATCTCACAACTCTTCCAAACGAGGAAACTTAG...TCCCAAACTGCGCAATGACTGCCCCATCATAGGCAGTGGTCCGTGGAGTCGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp GCGCGAGTCACTGCGCCCAGCTGCTATACATTGTTAAACCTTTTGCTTTCTAGTCAGGCTGGAATGCAGTaGTGTGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: ARVTAPSCYTLLNLLLSSQAGMQ*CDLGSL
Trigger: CAGTGAGCCGAGATCACACCACTGCATTCCAGCCTG...ACTAGAAAGCAAAAGGTTTAACAATGTATAGCAGCTGGGCGCAGTGACTCGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp AGGCAACTTGACCCAGTTAAGTACCACTGGCCTTGGAAACAAGTAGATGCGGGGACAGAAAAGGATGTCTaGGATGGAAGCCATGCTGAC +
Preference number: 4 (lower is better)
Translates to: RQLDPVKYHWPWKQVDAGTEKDV*DGSHAD
Trigger: GTCAGCATGGCTTCCATCTCAGACATCCTTTTCTGT...CCCCGCATCTACTTGTTTCCAAGGCCAGTGGTACTTAACTGGGTCAAGTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp ATGGGGCAGTCATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGAGTGGACATGATGGCCTCACATaGGAGAATAGACATGAAAGA +
Preference number: 4 (lower is better)
Translates to: MGQSLRSLGNQQEELRSGHDGLT*ENRHER
Trigger: TCTTTCATGTCTATTCTCTCATGTGAGGCCATCATG...TCCACTCCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAATGACTGCCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378426.5
CDS-3UTR GCA 90 bp ATGGGGCAGTCATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGAGTGGAGACTTTCACAGAACATaGCTGATTTTTGTTGACGGG +
Preference number: 4 (lower is better)
Translates to: MGQSLRSLGNQQEELRSGDFHRT*LIFVDG
Trigger: CCCGTCAACAAAAATCAGGCATGTTCTGTGAAAGTC...TCCACTCCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAATGACTGCCCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR GCA 90 bp CACATCTTCACTGGGCTTGGAATGGAGCCTTTCCTGCAGGCAGTGAGGAACATGACCCTTGTGCCCAGGTaGACAGTTCTGTTAAATAGA +
Preference number: 4 (lower is better)
Translates to: HIFTGLGMEPFLQAVRNMTLVPR*TVLLNR
Trigger: TCTATTTAACAGAACTGTGCACCTGGGCACAAGGGT...CATGTTCCTCACTGCCTGCAGGAAAGGCTCCATTCCAAGCCCAGTGAAGATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp ACAGTGCAGCATCGCTTCATTCTTTCCAACAGTTGCATAAGATCCTGTAGTATGCTCCAGGTGAGCCTCTaGCACAGGCCTGGCCAAACA +
Preference number: 4 (lower is better)
Translates to: TVQHRFILSNSCIRSCSMLQVSL*HRPGQT
Trigger: TGTTTGGCCAGGCCTGTGCCAGAGGCTCACCTGGAG...CATACTACAGGATCTTATGCAACTGTTGGAAAGAATGAAGCGATGCTGCACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp GTATTTATATCTACTTCAGTGGCTGGCACATGGTGGACCCTTGATAAAAGCTTCTTGCCTGCCAGTGGGTaGAGCACTCCAGGTGAGCCT +
Preference number: 4 (lower is better)
Translates to: VFISTSVAGTWWTLDKSFLPASG*STPGEP
Trigger: AGGCTCACCTGGAGTGCTCCACCCACTGGCAGGCAA...GAAGCTTTTATCAAGGGTCCACCATGTGCCAGCCACTGAAGTAGATATAAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp CACAGGCAACTTGACCCAGTTAAGTACCACTGGCCTTGGAAACAAGTAGATGCGCAGCCTTGGGGATCCTaGGTGAATAGGAATAGGACT +
Preference number: 4 (lower is better)
Translates to: HRQLDPVKYHWPWKQVDAQPWGS*VNRNRT
Trigger: AGTCCTATTCCTATTCACCCAGGATCCCCAAGGCTG...CGCATCTACTTGTTTCCAAGGCCAGTGGTACTTAACTGGGTCAAGTTGCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp ATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGAGTGGATGACTTTAGGGTTCACAGAACATGCCTaGTTTTTGTTGACGGGCAAC +
Preference number: 4 (lower is better)
Translates to: IAQFGKPAGGTQEWMTLGFTEHA*FLLTGN
Trigger: GTTGCCCGTCAACAAAAATCAGGCATGTTCTGTGAA...CCCTAAAGTCATCCACTCCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp AGAGCGGACAAATCCAGTAAGATGACAGTTCGTATACCATCATCCATACCTTACCTAGTCCTCGGGGCATaGAGGCCTATAGCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: RADKSSKMTVRIPSSIPYLVLGA*RPIARE
Trigger: CTCCCTTGCTATAGGCCTTCATGCCCCGAGGACTAG...GTAAGGTATGGATGATGGTATACGAACTGTCATCTTACTGGATTTGTCCGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378426.5
CDS-3UTR GCA 90 bp CCCATTCTACAGATGACATCCTTGGTGGGCGGCTGGATAGGCACACATCTTCACCCTGTAGTATGGATGTaGTACACTTTAACAGTGCTG +
Preference number: 4 (lower is better)
Translates to: PILQMTSLVGGWIGTHLHPVVWM*YTLTVL
Trigger: CAGCACTGTTAAAGTGTAGCACATCCATACTACAGG...GTGAAGATGTGTGCCTATCCAGCCGCCCACCAAGGATGTCATCTGTAGAATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR GCA 90 bp ACAGTGCAGCATCGCTTCATTCTTTCCAACAGTTGCATAAGATCCTGTAGTATGAGGGAACAGGACACTTaGGCTCTGGGTCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: TVQHRFILSNSCIRSCSMREQDT*ALGLGQ
Trigger: CTGTCCCAGACCCAGAGCGCAAGTGTCCTGTTCCCT...CATACTACAGGATCTTATGCAACTGTTGGAAAGAATGAAGCGATGCTGCACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378426.5
CDS-3UTR GCA 90 bp CACAGGCAACTTGACCCAGTTAAGTACCACTGGCCTTGGAAACAAGTAGATGCGTTTAACACCATCATCTaGCTGAACTCACCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: HRQLDPVKYHWPWKQVDAFNTII*LNSPQA
Trigger: GGCCTGAGGTGAGTTCAGGCAGATGATGGTGTTAAA...CGCATCTACTTGTTTCCAAGGCCAGTGGTACTTAACTGGGTCAAGTTGCCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378426.5
CDS-3UTR CCA 90 bp GCGCGAGTCACTGCGCCCAGCTGCTATACATTGTTAAACCTTTTGCTTTCTAGTCATCTTCACTGGGCTTaGAATGGAGCCTTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: ARVTAPSCYTLLNLLLSSHLHWA*NGAFPA
Trigger: TGCAGGAAAGGCTCCATTCCAAGCCCAGTGAAGATG...ACTAGAAAGCAAAAGGTTTAACAATGTATAGCAGCTGGGCGCAGTGACTCGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp GCGCGAGTCACTGCGCCCAGCTGCTATACATTGTTAAACCTTTTGCTTTCTAGTGGCACACATCTTCACTaGGCTTGGAATGGAGCCTTT +
Preference number: 4 (lower is better)
Translates to: ARVTAPSCYTLLNLLLSSGTHLH*AWNGAF
Trigger: AAAGGCTCCATTCCAAGCCCAGTGAAGATGTGTGCC...ACTAGAAAGCAAAAGGTTTAACAATGTATAGCAGCTGGGCGCAGTGACTCGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp GTATTTATATCTACTTCAGTGGCTGGCACATGGTGGACCCTTGATAAAAGCTTCGTCTCTTCCAACTCTTaGCCACCTCCCAGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: VFISTSVAGTWWTLDKSFVSSNS*PPPRRP
Trigger: TGGACGCCTGGGAGGTGGCCAAGAGTTGGAAGAGAC...GAAGCTTTTATCAAGGGTCCACCATGTGCCAGCCACTGAAGTAGATATAAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378426.5
CDS-3UTR TCA 90 bp CACAGGCAACTTGACCCAGTTAAGTACCACTGGCCTTGGAAACAAGTAGATGCGTTCACAGAACATGCCTaGTTTTTGTTGACGGGCAAC +
Preference number: 4 (lower is better)
Translates to: HRQLDPVKYHWPWKQVDAFTEHA*FLLTGN
Trigger: GTTGCCCGTCAACAAAAATCAGGCATGTTCTGTGAA...CGCATCTACTTGTTTCCAAGGCCAGTGGTACTTAACTGGGTCAAGTTGCCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp TTACAGGCACATTTGCACTCATCTGGGCTTTACAAAGTGATATTAAGTGCATTTGGGGAAAGGCGAAAGTaGGGCCGACTCCACGGACCA +
Preference number: 4 (lower is better)
Translates to: LQAHLHSSGLYKVILSAFGERRK*GRLHGP
Trigger: TGGTCCGTGGAGTCGGCCTCACTTTCGCCTTTCCCC...AAATGCACTTAATATCACTTTGTAAAGCCCAGATGAGTGCAAATGTGCCTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp CAGCATCGCTTCATTCTTTCCAACAGTTGCATAAGATCCTGTAGTATGGATGTGCACCCATTCTACAGATaGCATCCTTGGTGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: QHRFILSNSCIRSCSMDVHPFYR*HPWWAA
Trigger: AGCCGCCCACCAAGGATGTCATCTGTAGAATGGGTG...CACATCCATACTACAGGATCTTATGCAACTGTTGGAAAGAATGAAGCGATGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp AAATCCAGTAAGATGACAGTTCGTATACCATCATCCATACCTTACACATCCTTGACTCCTGACCTCAGGTaGTCCGCCCTACTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: KSSKMTVRIPSSIPYTSLTPDLR*SALLSL
Trigger: GAGGCTGAGTAGGGCGGATCACCTGAGGTCAGGAGT...CAAGGATGTGTAAGGTATGGATGATGGTATACGAACTGTCATCTTACTGGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR GCA 90 bp AAGATTCCATTTGATCCCAAGTTTTGTACCTCACATCTAGAAGCTCTGAAATATCGGCCGACGAAACCCTaGAGGCAGCTGCGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: KIPFDPKFCTSHLEALKYRPTKP*RQLRSS
Trigger: ACTGCTGCGCAGCTGCCTGCAGGGTTTCGTCGGCCG...ATATTTCAGAGCTTCTAGATGTGAGGTACAAAACTTGGGATCAAATGGAATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR GCA 90 bp CACATCTTCACTGGGCTTGGAATGGAGCCTTTCCTGCAGGCAGTGAGGAACATGTATTCTGGAGTATACTaGCACAATCTCTGGGATGTT +
Preference number: 4 (lower is better)
Translates to: HIFTGLGMEPFLQAVRNMYSGVY*HNLWDV
Trigger: AACATCCCAGAGATTGTGGCAGTATACTCCAGAATA...CATGTTCCTCACTGCCTGCAGGAAAGGCTCCATTCCAAGCCCAGTGAAGATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR GCA 90 bp CAGCATCGCTTCATTCTTTCCAACAGTTGCATAAGATCCTGTAGTATGGATGTGGTGATCCGCCCACAGTaGTGGGATTACAGGCGTGAA +
Preference number: 4 (lower is better)
Translates to: QHRFILSNSCIRSCSMDVVIRPQ*WDYRRE
Trigger: TTCACGCCTGTAATCCCAGCACTGTGGGCGGATCAC...CACATCCATACTACAGGATCTTATGCAACTGTTGGAAAGAATGAAGCGATGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR GCA 90 bp ACTTTAACAGTGCTGCTGTACACATCCTGTTGTGCACACCCTTGTGCCCAGGTGCCTGTAGTATGGATGTaGTACACTTTAACAGTGCTG +
Preference number: 4 (lower is better)
Translates to: TLTVLLYTSCCAHPCAQVPVVWM*YTLTVL
Trigger: CAGCACTGTTAAAGTGTAGCACATCCATACTACAGG...CACCTGGGCACAAGGGTGTGCACAACAGGATGTGTACAGCAGCACTGTTAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp CACATCTTCACTGGGCTTGGAATGGAGCCTTTCCTGCAGGCAGTGAGGAACATGACAGCTGTTCTATTCTaGAGTATACTGCCACAATCT +
Preference number: 4 (lower is better)
Translates to: HIFTGLGMEPFLQAVRNMTAVLF*SILPQS
Trigger: AGATTGTGGCAGTATACTCCAGAATAGAACAGCTGT...CATGTTCCTCACTGCCTGCAGGAAAGGCTCCATTCCAAGCCCAGTGAAGATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp AAATCCAGTAAGATGACAGTTCGTATACCATCATCCATACCTTACACATCCTTGTTGCCTGCCAGTGGGTaGAGCACTCCAGGTGAGCCT +
Preference number: 4 (lower is better)
Translates to: KSSKMTVRIPSSIPYTSLLPASG*STPGEP
Trigger: AGGCTCACCTGGAGTGCTCCACCCACTGGCAGGCAA...CAAGGATGTGTAAGGTATGGATGATGGTATACGAACTGTCATCTTACTGGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp AGAGCGGACAAATCCAGTAAGATGACAGTTCGTATACCATCATCCATACCTTACCTTGGGGATCCTGGGTaGATAGGAATAGGACTTGCC +
Preference number: 4 (lower is better)
Translates to: RADKSSKMTVRIPSSIPYLGDPG*IGIGLA
Trigger: GGCAAGTCCTATTCCTATTCACCCAGGATCCCCAAG...GTAAGGTATGGATGATGGTATACGAACTGTCATCTTACTGGATTTGTCCGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp TTACAGGCACATTTGCACTCATCTGGGCTTTACAAAGTGATATTAAGTGCATTTAGCTCACCACAGCCTTaGCCACCTGGGCTCAAGGGA +
Preference number: 4 (lower is better)
Translates to: LQAHLHSSGLYKVILSAFSSPQP*PPGLKG
Trigger: TCCCTTGAGCCCAGGTGGTCAAGGCTGTGGTGAGCT...AAATGCACTTAATATCACTTTGTAAAGCCCAGATGAGTGCAAATGTGCCTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp AACAACTTTCCAGACCTCTACTATTCTAAAACACAAAGAGCATTACAGCTTGCTACTCCTGACCTCAGGTaGTCCGCCCTACTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: NNFPDLYYSKTQRALQLATPDLR*SALLSL
Trigger: GAGGCTGAGTAGGGCGGATCACCTGAGGTCAGGAGT...AGCAAGCTGTAATGCTCTTTGTGTTTTAGAATAGTAGAGGTCTGGAAAGTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR GCA 90 bp ATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGAGTGGATGACTTTAGGGTATTCTGGAGTATACTaGCACAATCTCTGGGATGTT +
Preference number: 4 (lower is better)
Translates to: IAQFGKPAGGTQEWMTLGYSGVY*HNLWDV
Trigger: AACATCCCAGAGATTGTGGCAGTATACTCCAGAATA...CCCTAAAGTCATCCACTCCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR GCA 90 bp ACAGTGCAGCATCGCTTCATTCTTTCCAACAGTTGCATAAGATCCTGTAGTATGGTACACATCCTGTTGTaGACACCCTTGTGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: TVQHRFILSNSCIRSCSMVHILL*TPLCPG
Trigger: ACCTGGGCACAAGGGTGTGCACAACAGGATGTGTAC...CATACTACAGGATCTTATGCAACTGTTGGAAAGAATGAAGCGATGCTGCACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp AAATCCAGTAAGATGACAGTTCGTATACCATCATCCATACCTTACACATCCTTGACCATGTCTCCCACTTaGAACCAGGAGGTTGCGGGG +
Preference number: 4 (lower is better)
Translates to: KSSKMTVRIPSSIPYTSLTMSPT*NQEVAG
Trigger: CCCCGCAACCTCCTGGTTCCAAGTGGGAGACATGGT...CAAGGATGTGTAAGGTATGGATGATGGTATACGAACTGTCATCTTACTGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp AAATCCAGTAAGATGACAGTTCGTATACCATCATCCATACCTTACACATCCTTGAGCAGTAACAGGCAGTaGCCCGCCTTCACCCAGTTC +
Preference number: 4 (lower is better)
Translates to: KSSKMTVRIPSSIPYTSLSSNRQ*PAFTQF
Trigger: GAACTGGGTGAAGGCGGGCCACTGCCTGTTACTGCT...CAAGGATGTGTAAGGTATGGATGATGGTATACGAACTGTCATCTTACTGGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp ATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGAGTGGATGACTTTAGGGACAGCTGTTCTATTCTaGAGTATACTGCCACAATCT +
Preference number: 4 (lower is better)
Translates to: IAQFGKPAGGTQEWMTLGTAVLF*SILPQS
Trigger: AGATTGTGGCAGTATACTCCAGAATAGAACAGCTGT...CCCTAAAGTCATCCACTCCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp AACAACTTTCCAGACCTCTACTATTCTAAAACACAAAGAGCATTACAGCTTGCTCTCCAGGTGAGCCTCTaGCACAGGCCTGGCCAAACA +
Preference number: 4 (lower is better)
Translates to: NNFPDLYYSKTQRALQLALQVSL*HRPGQT
Trigger: TGTTTGGCCAGGCCTGTGCCAGAGGCTCACCTGGAG...AGCAAGCTGTAATGCTCTTTGTGTTTTAGAATAGTAGAGGTCTGGAAAGTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp AGAGCGGACAAATCCAGTAAGATGACAGTTCGTATACCATCATCCATACCTTACCGATCAACCACGAAGTaGTCGCAGGAGTTGATGAGA +
Preference number: 4 (lower is better)
Translates to: RADKSSKMTVRIPSSIPYRSTTK*SQELMR
Trigger: TCTCATCAACTCCTGCGATCACTTCGTGGTTGATCG...GTAAGGTATGGATGATGGTATACGAACTGTCATCTTACTGGATTTGTCCGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp AAGATTCCATTTGATCCCAAGTTTTGTACCTCACATCTAGAAGCTCTGAAATATAGCTCACCACAGCCTTaGCCACCTGGGCTCAAGGGA +
Preference number: 4 (lower is better)
Translates to: KIPFDPKFCTSHLEALKYSSPQP*PPGLKG
Trigger: TCCCTTGAGCCCAGGTGGTCAAGGCTGTGGTGAGCT...ATATTTCAGAGCTTCTAGATGTGAGGTACAAAACTTGGGATCAAATGGAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp ACAGTGCAGCATCGCTTCATTCTTTCCAACAGTTGCATAAGATCCTGTAGTATGTGGCAATTCTGTTCCTaGAGGTCCACAGGCAACTTG +
Preference number: 4 (lower is better)
Translates to: TVQHRFILSNSCIRSCSMWQFCS*RSTGNL
Trigger: CAAGTTGCCTGTGGACCTTCAGGAACAGAATTGCCA...CATACTACAGGATCTTATGCAACTGTTGGAAAGAATGAAGCGATGCTGCACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp ATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGAGTGGATGACTTTAGGGAATCAAGATTCCATTTaGTCCCAAGTTTTGTACCTC +
Preference number: 4 (lower is better)
Translates to: IAQFGKPAGGTQEWMTLGNQDSI*SQVLYL
Trigger: GAGGTACAAAACTTGGGATCAAATGGAATCTTGATT...CCCTAAAGTCATCCACTCCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR GCA 90 bp AACAACTTTCCAGACCTCTACTATTCTAAAACACAAAGAGCATTACAGCTTGCTAACCCTGCAGGCAGCTaGGCAGCAGTAACAGGCAGT +
Preference number: 4 (lower is better)
Translates to: NNFPDLYYSKTQRALQLANPAGS*AAVTGS
Trigger: ACTGCCTGTTACTGCTGCGCAGCTGCCTGCAGGGTT...AGCAAGCTGTAATGCTCTTTGTGTTTTAGAATAGTAGAGGTCTGGAAAGTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR GCA 90 bp ACTTTAACAGTGCTGCTGTACACATCCTGTTGTGCACACCCTTGTGCCCAGGTGTTCATCTCTGAAGAGTaGATGATCTCATTACGACAT +
Preference number: 4 (lower is better)
Translates to: TLTVLLYTSCCAHPCAQVFISEE*MISLRH
Trigger: ATGTCGTAATGAGATCATGCACTCTTCAGAGATGAA...CACCTGGGCACAAGGGTGTGCACAACAGGATGTGTACAGCAGCACTGTTAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR GCA 90 bp ATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGAGTGGATGACTTTAGGGTTCATCTCTGAAGAGTaGATGATCTCATTACGACAT +
Preference number: 4 (lower is better)
Translates to: IAQFGKPAGGTQEWMTLGFISEE*MISLRH
Trigger: ATGTCGTAATGAGATCATGCACTCTTCAGAGATGAA...CCCTAAAGTCATCCACTCCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR GCA 90 bp AACAACTTTCCAGACCTCTACTATTCTAAAACACAAAGAGCATTACAGCTTGCTGGAATAGGACTTGCCTaGCAGTGGGTGGAGCACTCC +
Preference number: 4 (lower is better)
Translates to: NNFPDLYYSKTQRALQLAGIGLA*QWVEHS
Trigger: GGAGTGCTCCACCCACTGGCAGGCAAGTCCTATTCC...AGCAAGCTGTAATGCTCTTTGTGTTTTAGAATAGTAGAGGTCTGGAAAGTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp AACAACTTTCCAGACCTCTACTATTCTAAAACACAAAGAGCATTACAGCTTGCTAGCAGTAACAGGCAGTaGCCCGCCTTCACCCAGTTC +
Preference number: 4 (lower is better)
Translates to: NNFPDLYYSKTQRALQLASSNRQ*PAFTQF
Trigger: GAACTGGGTGAAGGCGGGCCACTGCCTGTTACTGCT...AGCAAGCTGTAATGCTCTTTGTGTTTTAGAATAGTAGAGGTCTGGAAAGTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp GTATTTATATCTACTTCAGTGGCTGGCACATGGTGGACCCTTGATAAAAGCTTCTCAGTGGCTGGCACATaGTGGACCCTTGATAAAAGC +
Preference number: 4 (lower is better)
Translates to: VFISTSVAGTWWTLDKSFSVAGT*WTLDKS
Trigger: GCTTTTATCAAGGGTCCACCATGTGCCAGCCACTGA...GAAGCTTTTATCAAGGGTCCACCATGTGCCAGCCACTGAAGTAGATATAAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp GTATTTATATCTACTTCAGTGGCTGGCACATGGTGGACCCTTGATAAAAGCTTCAATACTCCCAAGCTATaGGGGGACCCTTCAGTCAAA +
Preference number: 4 (lower is better)
Translates to: VFISTSVAGTWWTLDKSFNTPKL*GDPSVK
Trigger: TTTGACTGAAGGGTCCCCTCATAGCTTGGGAGTATT...GAAGCTTTTATCAAGGGTCCACCATGTGCCAGCCACTGAAGTAGATATAAATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR GCA 90 bp AGGCAACTTGACCCAGTTAAGTACCACTGGCCTTGGAAACAAGTAGATGCGGGGATTCTTTCCAACAGTTaGATAAGATCCTGTAGTATG +
Preference number: 4 (lower is better)
Translates to: RQLDPVKYHWPWKQVDAGILSNS*IRSCSM
Trigger: CATACTACAGGATCTTATGCAACTGTTGGAAAGAAT...CCCCGCATCTACTTGTTTCCAAGGCCAGTGGTACTTAACTGGGTCAAGTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR GCA 90 bp AAGATTCCATTTGATCCCAAGTTTTGTACCTCACATCTAGAAGCTCTGAAATATGTGATCTCGGCTCACTaGAACCTCCACCTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: KIPFDPKFCTSHLEALKYVISAH*NLHLPS
Trigger: ACTGGGGAGGTGGAGGTTGCAGTGAGCCGAGATCAC...ATATTTCAGAGCTTCTAGATGTGAGGTACAAAACTTGGGATCAAATGGAATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp CACAGGCAACTTGACCCAGTTAAGTACCACTGGCCTTGGAAACAAGTAGATGCGTACTGCCACAATCTCTaGGATGTTCTTGAATTCATT +
Preference number: 4 (lower is better)
Translates to: HRQLDPVKYHWPWKQVDAYCHNL*DVLEFI
Trigger: AATGAATTCAAGAACATCCCAGAGATTGTGGCAGTA...CGCATCTACTTGTTTCCAAGGCCAGTGGTACTTAACTGGGTCAAGTTGCCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp AAATCCAGTAAGATGACAGTTCGTATACCATCATCCATACCTTACACATCCTTGGTGAGCCATCACACCTaGCCTGGTAGCAAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: KSSKMTVRIPSSIPYTSLVSHHT*PGSKFW
Trigger: CCAAAACTTGCTACCAGGCCAGGTGTGATGGCTCAC...CAAGGATGTGTAAGGTATGGATGATGGTATACGAACTGTCATCTTACTGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp AAGATTCCATTTGATCCCAAGTTTTGTACCTCACATCTAGAAGCTCTGAAATATACAGCCTTGACCACCTaGGCTCAAGGGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: KIPFDPKFCTSHLEALKYTALTT*AQGILP
Trigger: TGGGAGGATCCCTTGAGCCCAGGTGGTCAAGGCTGT...ATATTTCAGAGCTTCTAGATGTGAGGTACAAAACTTGGGATCAAATGGAATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp AAATCCAGTAAGATGACAGTTCGTATACCATCATCCATACCTTACACATCCTTGGTGAGGGCCAGGCCCTaGGAGCTTACTTTTCAAAAG +
Preference number: 4 (lower is better)
Translates to: KSSKMTVRIPSSIPYTSLVRARP*ELTFQK
Trigger: CTTTTGAAAAGTAAGCTCCCAGGGCCTGGCCCTCAC...CAAGGATGTGTAAGGTATGGATGATGGTATACGAACTGTCATCTTACTGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp ACTTTAACAGTGCTGCTGTACACATCCTGTTGTGCACACCCTTGTGCCCAGGTGACATTTGCACTCATCTaGGCTTTACAAAGTGATATT +
Preference number: 4 (lower is better)
Translates to: TLTVLLYTSCCAHPCAQVTFALI*ALQSDI
Trigger: AATATCACTTTGTAAAGCCCAGATGAGTGCAAATGT...CACCTGGGCACAAGGGTGTGCACAACAGGATGTGTACAGCAGCACTGTTAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp TTACAGGCACATTTGCACTCATCTGGGCTTTACAAAGTGATATTAAGTGCATTTCAGTCAAATATTCACTaGGCATGTGAGGGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LQAHLHSSGLYKVILSAFQSNIH*ACEGQA
Trigger: GGCCTGGCCCTCACATGCTCAGTGAATATTTGACTG...AAATGCACTTAATATCACTTTGTAAAGCCCAGATGAGTGCAAATGTGCCTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR GCA 90 bp AGAGCGGACAAATCCAGTAAGATGACAGTTCGTATACCATCATCCATACCTTACACCCTTGTGCCCAGGTaGACAGTTCTGTTAAATAGA +
Preference number: 4 (lower is better)
Translates to: RADKSSKMTVRIPSSIPYTLVPR*TVLLNR
Trigger: TCTATTTAACAGAACTGTGCACCTGGGCACAAGGGT...GTAAGGTATGGATGATGGTATACGAACTGTCATCTTACTGGATTTGTCCGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR GCA 90 bp ACAGTGCAGCATCGCTTCATTCTTTCCAACAGTTGCATAAGATCCTGTAGTATGTGTCTTAGAGATCACTaGATGACCACAGTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: TVQHRFILSNSCIRSCSMCLRDH*MTTVQH
Trigger: ATGCTGCACTGTGGTCATGCAGTGATCTCTAAGACA...CATACTACAGGATCTTATGCAACTGTTGGAAAGAATGAAGCGATGCTGCACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp AAATCCAGTAAGATGACAGTTCGTATACCATCATCCATACCTTACACATCCTTGAAGTACCACTGGCCTTaGAAACAAGTAGATGCGGGG +
Preference number: 4 (lower is better)
Translates to: KSSKMTVRIPSSIPYTSLKYHWP*KQVDAG
Trigger: CCCCGCATCTACTTGTTTCCAAGGCCAGTGGTACTT...CAAGGATGTGTAAGGTATGGATGATGGTATACGAACTGTCATCTTACTGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp ACAGTGCAGCATCGCTTCATTCTTTCCAACAGTTGCATAAGATCCTGTAGTATGTGTGAATCCAGTTTTTaGTGTAGACAGAGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: TVQHRFILSNSCIRSCSMCESSF*CRQRLS
Trigger: AGACAGCCTCTGTCTACATCAAAAACTGGATTCACA...CATACTACAGGATCTTATGCAACTGTTGGAAAGAATGAAGCGATGCTGCACTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp CAGCATCGCTTCATTCTTTCCAACAGTTGCATAAGATCCTGTAGTATGGATGTGTGTGAATCCAGTTTTTaGTGTAGACAGAGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: QHRFILSNSCIRSCSMDVCESSF*CRQRLS
Trigger: AGACAGCCTCTGTCTACATCAAAAACTGGATTCACA...CACATCCATACTACAGGATCTTATGCAACTGTTGGAAAGAATGAAGCGATGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp TTACAGGCACATTTGCACTCATCTGGGCTTTACAAAGTGATATTAAGTGCATTTAGTCATTGCGCAGTTTaGGAAACCAGCAGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: LQAHLHSSGLYKVILSAFSHCAV*ETSRRN
Trigger: GTTCCTCCTGCTGGTTTCCCAAACTGCGCAATGACT...AAATGCACTTAATATCACTTTGTAAAGCCCAGATGAGTGCAAATGTGCCTGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp CAGCATCGCTTCATTCTTTCCAACAGTTGCATAAGATCCTGTAGTATGGATGTGCCAGTTAAGTACCACTaGCCTTGGAAACAAGTAGAT +
Preference number: 4 (lower is better)
Translates to: QHRFILSNSCIRSCSMDVPVKYH*PWKQVD
Trigger: ATCTACTTGTTTCCAAGGCCAGTGGTACTTAACTGG...CACATCCATACTACAGGATCTTATGCAACTGTTGGAAAGAATGAAGCGATGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp GTATTTATATCTACTTCAGTGGCTGGCACATGGTGGACCCTTGATAAAAGCTTCCCAGTTAAGTACCACTaGCCTTGGAAACAAGTAGAT +
Preference number: 4 (lower is better)
Translates to: VFISTSVAGTWWTLDKSFPVKYH*PWKQVD
Trigger: ATCTACTTGTTTCCAAGGCCAGTGGTACTTAACTGG...GAAGCTTTTATCAAGGGTCCACCATGTGCCAGCCACTGAAGTAGATATAAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR CAA 72 bp TTATATCTACTTCAGTGGCTGGCACATGGTGGACCCTaGATAAAAGCTTCTTGGATAGATAGGCAGAAACTA +
Preference number: 4 (lower is better)
Translates to: LYLLQWLAHGGP*IKASWIDRQKL
Trigger: TAGTTTCTGCCTATCTATCCAAGAAGCTTTTATCAAGGGTCCACCATGTGCCAGCCACTGAAGTAGATATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp GTATTTATATCTACTTCAGTGGCTGGCACATGGTGGACCCTTGATAAAAGCTTCCCATTTCTGTTGACATaGTGTCTCAAAATCTCCCTT +
Preference number: 4 (lower is better)
Translates to: VFISTSVAGTWWTLDKSFPFLLT*CLKISL
Trigger: AAGGGAGATTTTGAGACATCATGTCAACAGAAATGG...GAAGCTTTTATCAAGGGTCCACCATGTGCCAGCCACTGAAGTAGATATAAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp CAGCATCGCTTCATTCTTTCCAACAGTTGCATAAGATCCTGTAGTATGGATGTGCCATTTCTGTTGACATaGTGTCTCAAAATCTCCCTT +
Preference number: 4 (lower is better)
Translates to: QHRFILSNSCIRSCSMDVPFLLT*CLKISL
Trigger: AAGGGAGATTTTGAGACATCATGTCAACAGAAATGG...CACATCCATACTACAGGATCTTATGCAACTGTTGGAAAGAATGAAGCGATGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp GTATTTATATCTACTTCAGTGGCTGGCACATGGTGGACCCTTGATAAAAGCTTCTTTTGGATCTTCATCTaGAAATCTCGAAGCCACGTA +
Preference number: 4 (lower is better)
Translates to: VFISTSVAGTWWTLDKSFFWIFI*KSRSHV
Trigger: TACGTGGCTTCGAGATTTTCAGATGAAGATCCAAAA...GAAGCTTTTATCAAGGGTCCACCATGTGCCAGCCACTGAAGTAGATATAAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp AAGATTCCATTTGATCCCAAGTTTTGTACCTCACATCTAGAAGCTCTGAAATATCACTTCCAGTCGATTTaGGAGCTCTTCAGGCAACAC +
Preference number: 4 (lower is better)
Translates to: KIPFDPKFCTSHLEALKYHFQSI*ELFRQH
Trigger: GTGTTGCCTGAAGAGCTCTCAAATCGACTGGAAGTG...ATATTTCAGAGCTTCTAGATGTGAGGTACAAAACTTGGGATCAAATGGAATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR GCA 90 bp GTATTTATATCTACTTCAGTGGCTGGCACATGGTGGACCCTTGATAAAAGCTTCTATATGATGCTACATTaGCTTAAAGCCCTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: VFISTSVAGTWWTLDKSFYMMLH*LKALSR
Trigger: CCTAGAGAGGGCTTTAAGGCAATGTAGCATCATATA...GAAGCTTTTATCAAGGGTCCACCATGTGCCAGCCACTGAAGTAGATATAAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp CAGCATCGCTTCATTCTTTCCAACAGTTGCATAAGATCCTGTAGTATGGATGTGATAGCAGAAAATCCCTaGGTGGTAGCAAGTTTTGTT +
Preference number: 4 (lower is better)
Translates to: QHRFILSNSCIRSCSMDVIAENP*VVASFV
Trigger: AACAAAACTTGCTACCACCCAGGGATTTTCTGCTAT...CACATCCATACTACAGGATCTTATGCAACTGTTGGAAAGAATGAAGCGATGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp AAGATTCCATTTGATCCCAAGTTTTGTACCTCACATCTAGAAGCTCTGAAATATTCAGTGGCTGGCACATaGTGGACCCTTGATAAAAGC +
Preference number: 4 (lower is better)
Translates to: KIPFDPKFCTSHLEALKYSVAGT*WTLDKS
Trigger: GCTTTTATCAAGGGTCCACCATGTGCCAGCCACTGA...ATATTTCAGAGCTTCTAGATGTGAGGTACAAAACTTGGGATCAAATGGAATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp ACAGTGCAGCATCGCTTCATTCTTTCCAACAGTTGCATAAGATCCTGTAGTATGCATCTCCATTTCTGTTaGCATGATGTCTCAAAATCT +
Preference number: 4 (lower is better)
Translates to: TVQHRFILSNSCIRSCSMHLHFC*HDVSKS
Trigger: AGATTTTGAGACATCATGTCAACAGAAATGGAGATG...CATACTACAGGATCTTATGCAACTGTTGGAAAGAATGAAGCGATGCTGCACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp AGAGCGGACAAATCCAGTAAGATGACAGTTCGTATACCATCATCCATACCTTACAGATACTTTCATCTCTaGAGAGTGCATGATCTCATT +
Preference number: 4 (lower is better)
Translates to: RADKSSKMTVRIPSSIPYRYFHL*RVHDLI
Trigger: AATGAGATCATGCACTCTTCAGAGATGAAAGTATCT...GTAAGGTATGGATGATGGTATACGAACTGTCATCTTACTGGATTTGTCCGCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp CAGCATCGCTTCATTCTTTCCAACAGTTGCATAAGATCCTGTAGTATGGATGTGAATCAAGATTCCATTTaGTCCCAAGTTTTGTACCTC +
Preference number: 4 (lower is better)
Translates to: QHRFILSNSCIRSCSMDVNQDSI*SQVLYL
Trigger: GAGGTACAAAACTTGGGATCAAATGGAATCTTGATT...CACATCCATACTACAGGATCTTATGCAACTGTTGGAAAGAATGAAGCGATGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp GTATTTATATCTACTTCAGTGGCTGGCACATGGTGGACCCTTGATAAAAGCTTCTTAATTCTAGACCAATaGCTTCAGGTGTATTTGGCT +
Preference number: 4 (lower is better)
Translates to: VFISTSVAGTWWTLDKSFLILDQ*LQVYLA
Trigger: AGCCAAATACACCTGAAGTCATTGGTCTAGAATTAA...GAAGCTTTTATCAAGGGTCCACCATGTGCCAGCCACTGAAGTAGATATAAATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378426.5
CDS-3UTR GCA 90 bp GTATTTATATCTACTTCAGTGGCTGGCACATGGTGGACCCTTGATAAAAGCTTCCACCTCTTGTTCTTCTaGTTGAAGATATATCTCTTG +
Preference number: 4 (lower is better)
Translates to: VFISTSVAGTWWTLDKSFHLLFF*LKIYLL
Trigger: CAAGAGATATATCTTCAAGCAGAAGAACAAGAGGTG...GAAGCTTTTATCAAGGGTCCACCATGTGCCAGCCACTGAAGTAGATATAAATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
3UTR CAA 72 bp TTTGTTTGGGTACAATACTCTGGTAACTTTTTCCTTTaGCACAGAAAAGGATGTCTGAGATGGAAGCCATGC +
Preference number: 4 (lower is better)
Translates to: FVWVQYSGNFFL*HRKGCLRWKPC
Trigger: GCATGGCTTCCATCTCAGACATCCTTTTCTGTGCAAAAGGAAAAAGTTACCAGAGTATTGTACCCAAACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327877.10
ENST00000378421.1
ENST00000378426.5
3UTR CAA 72 bp ACAGTTCGTATACCATCATCCATACCTTACACATCCTaGTATTTATATCTACTTCAGTGGCTGGCACATGGT +
Preference number: 4 (lower is better)
Translates to: TVRIPSSIPYTS*YLYLLQWLAHG
Trigger: ACCATGTGCCAGCCACTGAAGTAGATATAAATACAAGGATGTGTAAGGTATGGATGATGGTATACGAACTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp TTACAGGCACATTTGCACTCATCTGGGCTTTACAAAGTGATATTAAGTGCATTTATTGTTGTGTGTTCATaGTGGCCTCACATGAGAGAA +
Preference number: 4 (lower is better)
Translates to: LQAHLHSSGLYKVILSAFIVVCS*WPHMRE
Trigger: TTCTCTCATGTGAGGCCATCATGAACACACAACAAT...AAATGCACTTAATATCACTTTGTAAAGCCCAGATGAGTGCAAATGTGCCTGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378426.5
CDS-3UTR GCA 90 bp GTATTTATATCTACTTCAGTGGCTGGCACATGGTGGACCCTTGATAAAAGCTTCGGCAATGTTTCTTCTTaGTTTCCTCTAAAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: VFISTSVAGTWWTLDKSFGNVSS*FPLKRK
Trigger: TTTCCTTTTTAGAGGAAAGCAAGAAGAAACATTGCC...GAAGCTTTTATCAAGGGTCCACCATGTGCCAGCCACTGAAGTAGATATAAATAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp CAGCATCGCTTCATTCTTTCCAACAGTTGCATAAGATCCTGTAGTATGGATGTGACATTTGCACTCATCTaGGCTTTACAAAGTGATATT +
Preference number: 4 (lower is better)
Translates to: QHRFILSNSCIRSCSMDVTFALI*ALQSDI
Trigger: AATATCACTTTGTAAAGCCCAGATGAGTGCAAATGT...CACATCCATACTACAGGATCTTATGCAACTGTTGGAAAGAATGAAGCGATGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp AACAACTTTCCAGACCTCTACTATTCTAAAACACAAAGAGCATTACAGCTTGCTGACTTCAGGTGTATTTaGCTAAACAGGGAGTTGATG +
Preference number: 4 (lower is better)
Translates to: NNFPDLYYSKTQRALQLADFRCI*LNRELM
Trigger: CATCAACTCCCTGTTTAGCCAAATACACCTGAAGTC...AGCAAGCTGTAATGCTCTTTGTGTTTTAGAATAGTAGAGGTCTGGAAAGTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378426.5
CDS-3UTR CCA 90 bp AAATCCAGTAAGATGACAGTTCGTATACCATCATCCATACCTTACACATCCTTGAGAGCTAGGCATCAATaGTGTCATTTTAAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: KSSKMTVRIPSSIPYTSLRARHQ*CHFKAE
Trigger: TTCTGCCTTAAAATGACACCATTGATGCCTAGCTCT...CAAGGATGTGTAAGGTATGGATGATGGTATACGAACTGTCATCTTACTGGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378426.5
3UTR CAA 72 bp ACCAATGACTTCAGGTGTATTTGGCTAAACAGGGAGTaGATGCTGAATTACTTCACAGACGTAAGAATCATT +
Preference number: 4 (lower is better)
Translates to: TNDFRCIWLNRE*MLNYFTDVRII
Trigger: AATGATTCTTACGTCTGTGAAGTAATTCAGCATCAACTCCCTGTTTAGCCAAATACACCTGAAGTCATTGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378426.5
CDS-3UTR TCA 90 bp AACAACTTTCCAGACCTCTACTATTCTAAAACACAAAGAGCATTACAGCTTGCTTTTTGGATCTTCATCTaGAAATCTCGAAGCCACGTA +
Preference number: 4 (lower is better)
Translates to: NNFPDLYYSKTQRALQLAFWIFI*KSRSHV
Trigger: TACGTGGCTTCGAGATTTTCAGATGAAGATCCAAAA...AGCAAGCTGTAATGCTCTTTGTGTTTTAGAATAGTAGAGGTCTGGAAAGTTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp AAATCCAGTAAGATGACAGTTCGTATACCATCATCCATACCTTACACATCCTTGACAAATCCAGTAAGATaGCAGTTCGTATACCATCAT +
Preference number: 4 (lower is better)
Translates to: KSSKMTVRIPSSIPYTSLTNPVR*QFVYHH
Trigger: ATGATGGTATACGAACTGTCATCTTACTGGATTTGT...CAAGGATGTGTAAGGTATGGATGATGGTATACGAACTGTCATCTTACTGGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp AAATCCAGTAAGATGACAGTTCGTATACCATCATCCATACCTTACACATCCTTGTACTGCCACAATCTCTaGGATGTTCTTGAATTCATT +
Preference number: 4 (lower is better)
Translates to: KSSKMTVRIPSSIPYTSLYCHNL*DVLEFI
Trigger: AATGAATTCAAGAACATCCCAGAGATTGTGGCAGTA...CAAGGATGTGTAAGGTATGGATGATGGTATACGAACTGTCATCTTACTGGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp AACAACTTTCCAGACCTCTACTATTCTAAAACACAAAGAGCATTACAGCTTGCTATAGCAGAAAATCCCTaGGTGGTAGCAAGTTTTGTT +
Preference number: 4 (lower is better)
Translates to: NNFPDLYYSKTQRALQLAIAENP*VVASFV
Trigger: AACAAAACTTGCTACCACCCAGGGATTTTCTGCTAT...AGCAAGCTGTAATGCTCTTTGTGTTTTAGAATAGTAGAGGTCTGGAAAGTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp AAGATTCCATTTGATCCCAAGTTTTGTACCTCACATCTAGAAGCTCTGAAATATTCAGTGTCCTTTCTTTaGAACAATAAGGACAAAGGC +
Preference number: 4 (lower is better)
Translates to: KIPFDPKFCTSHLEALKYSVSFL*NNKDKG
Trigger: GCCTTTGTCCTTATTGTTTCAAAGAAAGGACACTGA...ATATTTCAGAGCTTCTAGATGTGAGGTACAAAACTTGGGATCAAATGGAATCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378426.5
CDS-3UTR GCA 90 bp AAATCCAGTAAGATGACAGTTCGTATACCATCATCCATACCTTACACATCCTTGGGCAATGTTTCTTCTTaGTTTCCTCTAAAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: KSSKMTVRIPSSIPYTSLGNVSS*FPLKRK
Trigger: TTTCCTTTTTAGAGGAAAGCAAGAAGAAACATTGCC...CAAGGATGTGTAAGGTATGGATGATGGTATACGAACTGTCATCTTACTGGATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR GCA 90 bp AAGATTCCATTTGATCCCAAGTTTTGTACCTCACATCTAGAAGCTCTGAAATATTATATGATGCTACATTaGCTTAAAGCCCTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: KIPFDPKFCTSHLEALKYYMMLH*LKALSR
Trigger: CCTAGAGAGGGCTTTAAGGCAATGTAGCATCATATA...ATATTTCAGAGCTTCTAGATGTGAGGTACAAAACTTGGGATCAAATGGAATCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR TCA 90 bp AAGATTCCATTTGATCCCAAGTTTTGTACCTCACATCTAGAAGCTCTGAAATATAGATACTTTCATCTCTaGAGAGTGCATGATCTCATT +
Preference number: 4 (lower is better)
Translates to: KIPFDPKFCTSHLEALKYRYFHL*RVHDLI
Trigger: AATGAGATCATGCACTCTTCAGAGATGAAAGTATCT...ATATTTCAGAGCTTCTAGATGTGAGGTACAAAACTTGGGATCAAATGGAATCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR GCA 90 bp TTACAGGCACATTTGCACTCATCTGGGCTTTACAAAGTGATATTAAGTGCATTTATTCTTTCCAACAGTTaGATAAGATCCTGTAGTATG +
Preference number: 4 (lower is better)
Translates to: LQAHLHSSGLYKVILSAFILSNS*IRSCSM
Trigger: CATACTACAGGATCTTATGCAACTGTTGGAAAGAAT...AAATGCACTTAATATCACTTTGTAAAGCCCAGATGAGTGCAAATGTGCCTGTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CCA 90 bp AAGATTCCATTTGATCCCAAGTTTTGTACCTCACATCTAGAAGCTCTGAAATATCTAAGTTTCCTCGTTTaGAAGAGTTGTGAGATGAAT +
Preference number: 4 (lower is better)
Translates to: KIPFDPKFCTSHLEALKYLSFLV*KSCEMN
Trigger: ATTCATCTCACAACTCTTCCAAACGAGGAAACTTAG...ATATTTCAGAGCTTCTAGATGTGAGGTACAAAACTTGGGATCAAATGGAATCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS GCA 90 bp AGTAGGCCGCGGTGGAAGGAGAGCACCTCGCGGCCGACGAAACCCTaGAGGCAGCTGCGCAGCAGTAACAGGCAGTGGCCCGCCTTCACC +
Preference number: 5 (lower is better)
Translates to: SRPRWKESTSRPTKP*RQLRSSNRQWPAFT
Trigger: GGTGAAGGCGGGCCACTGCCTGTTACTGCTGCGCAGCTGCCTGCAGGGTTTCGTCGGCCGCGAGGTGCTCTCCTTCCACCGCGGCCTACT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327877.10
ENST00000378421.1
ENST00000378426.5
CDS CCA 90 bp CGGCCGACGAAACCCTGCAGGCAGCTGCGCAGCAGTAACAGGCAGTaGCCCGCCTTCACCCAGTTCTTGTACTCGGCGCAGTTGAGGCGC +
Preference number: 5 (lower is better)
Translates to: RPTKPCRQLRSSNRQ*PAFTQFLYSAQLRR
Trigger: GCGCCTCAACTGCGCCGAGTACAAGAACTGGGTGAAGGCGGGCCACTGCCTGTTACTGCTGCGCAGCTGCCTGCAGGGTTTCGTCGGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327877.10
ENST00000378421.1
ENST00000378426.5
CDS-3UTR CAA 90 bp CTGGGTCCTGCCTGTCCACTGGTCACTCGAGTCACCATTCTCCAGCTCCCCACACGGGGCATGAAGGCCTaGGCCACCTCCCAGGCGTCC +
Preference number: 5 (lower is better)
Translates to: LGPACPLVTRVTILQLPTRGMKA*ATSQAS
Trigger: GGACGCCTGGGAGGTGGCCAAGGCCTTCATGCCCCG...TGTGGGGAGCTGGAGAATGGTGACTCGAGTGACCAGTGGACAGGCAGGACCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327877.10
CDS GCA 90 bp GGTGGAAGGAGAGCACCTCGCGGCCGACGAAACCCTGCAGGCAGCTaGGCAGCAGTAACAGGCAGTGGCCCGCCTTCACCCAGTTCTTGT +
Preference number: 5 (lower is better)
Translates to: GGRRAPRGRRNPAGS*AAVTGSGPPSPSSC
Trigger: ACAAGAACTGGGTGAAGGCGGGCCACTGCCTGTTACTGCTGCGCAGCTGCCTGCAGGGTTTCGTCGGCCGCGAGGTGCTCTCCTTCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327877.10
ENST00000378421.1
ENST00000378426.5
CDS-3UTR CAA 90 bp CTGGGTCCTGCCTGTCCACTGGTCACTCGAGTCACCATTCTCCAGCTCCCCACATCCTCAGGTCCTTGTTaGTCTGCTAGTCCTCGGGGC +
Preference number: 5 (lower is better)
Translates to: LGPACPLVTRVTILQLPTSSGPC*SASPRG
Trigger: GCCCCGAGGACTAGCAGACAAACAAGGACCTGAGGA...TGTGGGGAGCTGGAGAATGGTGACTCGAGTGACCAGTGGACAGGCAGGACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CAA 90 bp GCAGTCATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGAGTGGATGACTTTGTACTCGGCGCAGTaGAGGCGCGCCGCTAGCTCC +
Preference number: 5 (lower is better)
Translates to: AVIAQFGKPAGGTQEWMTLYSAQ*RRAASS
Trigger: GGAGCTAGCGGCGCGCCTCAACTGCGCCGAGTACAA...AGTCATCCACTCCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAATGACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CAA 90 bp ATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGAGTGGATGACTTTAGGGTTGTACTCGGCGCAGTaGAGGCGCGCCGCTAGCTCC +
Preference number: 5 (lower is better)
Translates to: IAQFGKPAGGTQEWMTLGLYSAQ*RRAASS
Trigger: GGAGCTAGCGGCGCGCCTCAACTGCGCCGAGTACAA...CCCTAAAGTCATCCACTCCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CAA 90 bp ATGGGGCAGTCATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGAGTGGATGGGGTCTCGCCATCTaGCCCAGGTTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: MGQSLRSLGNQQEELRSGWGLAI*PRLVSN
Trigger: GTTTGAGACCAACCTGGGCAAGATGGCGAGACCCCA...TCCACTCCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAATGACTGCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS TCA 90 bp CATCACATTCCTCAGGTCCTTGTTTGTCTGCTAGTCCTCGGGGCATaGAGGCCTATAGCAAGGGAGGGAGGAGGGGGACCTGAGTCTCTT +
Preference number: 5 (lower is better)
Translates to: HHIPQVLVCLLVLGA*RPIAREGGGGPESL
Trigger: AAGAGACTCAGGTCCCCCTCCTCCCTCCCTTGCTATAGGCCTTCATGCCCCGAGGACTAGCAGACAAACAAGGACCTGAGGAATGTGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378421.1
ENST00000378426.5
CDS-3UTR CAA 90 bp CACATCTTCACTGGGCTTGGAATGGAGCCTTTCCTGCAGGCAGTGAGGAACATGTGGGGTCTCGCCATCTaGCCCAGGTTGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: HIFTGLGMEPFLQAVRNMWGLAI*PRLVSN
Trigger: GTTTGAGACCAACCTGGGCAAGATGGCGAGACCCCA...CATGTTCCTCACTGCCTGCAGGAAAGGCTCCATTCCAAGCCCAGTGAAGATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CAA 90 bp CCCATTCTACAGATGACATCCTTGGTGGGCGGCTGGATAGGCACACATCTTCACCTACAGATGACATCCTaGGTGGGCGGCTGGATAGGC +
Preference number: 5 (lower is better)
Translates to: PILQMTSLVGGWIGTHLHLQMTS*VGGWIG
Trigger: GCCTATCCAGCCGCCCACCAAGGATGTCATCTGTAG...GTGAAGATGTGTGCCTATCCAGCCGCCCACCAAGGATGTCATCTGTAGAATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CAA 90 bp AGGCAACTTGACCCAGTTAAGTACCACTGGCCTTGGAAACAAGTAGATGCGGGGAGTCTCTTCCAACTCTaGGCCACCTCCCAGGCGTCC +
Preference number: 5 (lower is better)
Translates to: RQLDPVKYHWPWKQVDAGSLFQL*ATSQAS
Trigger: GGACGCCTGGGAGGTGGCCAAGAGTTGGAAGAGACT...CCCCGCATCTACTTGTTTCCAAGGCCAGTGGTACTTAACTGGGTCAAGTTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378426.5
CDS-3UTR CAA 90 bp GGCCGACTCCACGGACCACTGCCTATGATGGGGCAGTCATTGCGCAGTTTGGGAAAGTTACAGGCACATTaGCACTCATCTGGGCTTTAC +
Preference number: 5 (lower is better)
Translates to: GRLHGPLPMMGQSLRSLGKLQAH*HSSGLY
Trigger: GTAAAGCCCAGATGAGTGCAAATGTGCCTGTAACTT...TCCCAAACTGCGCAATGACTGCCCCATCATAGGCAGTGGTCCGTGGAGTCGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CAA 90 bp GCAGTCATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGAGTGGATGACTGCTGTACACATCCTGTaGTGCACACCCTTGTGCCCA +
Preference number: 5 (lower is better)
Translates to: AVIAQFGKPAGGTQEWMTAVHIL*CTPLCP
Trigger: TGGGCACAAGGGTGTGCACAACAGGATGTGTACAGC...AGTCATCCACTCCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAATGACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CAA 90 bp GCGCGAGTCACTGCGCCCAGCTGCTATACATTGTTAAACCTTTTGCTTTCTAGTCACCATGTCTCCCACTaGGAACCAGGAGGTTGCGGG +
Preference number: 5 (lower is better)
Translates to: ARVTAPSCYTLLNLLLSSHHVSH*EPGGCG
Trigger: CCCGCAACCTCCTGGTTCCAAGTGGGAGACATGGTG...ACTAGAAAGCAAAAGGTTTAACAATGTATAGCAGCTGGGCGCAGTGACTCGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CAA 90 bp CACAGGCAACTTGACCCAGTTAAGTACCACTGGCCTTGGAAACAAGTAGATGCGCTGTTGTGCACACCCTaGTGCCCAGGTGCACAGTTC +
Preference number: 5 (lower is better)
Translates to: HRQLDPVKYHWPWKQVDALLCTP*CPGAQF
Trigger: GAACTGTGCACCTGGGCACAAGGGTGTGCACAACAG...CGCATCTACTTGTTTCCAAGGCCAGTGGTACTTAACTGGGTCAAGTTGCCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CAA 90 bp GGCCGACTCCACGGACCACTGCCTATGATGGGGCAGTCATTGCGCAGTTTGGGATGGCTAAACAGGGAGTaGATGCTGAATTACTTCACA +
Preference number: 5 (lower is better)
Translates to: GRLHGPLPMMGQSLRSLGWLNRE*MLNYFT
Trigger: TGTGAAGTAATTCAGCATCAACTCCCTGTTTAGCCA...TCCCAAACTGCGCAATGACTGCCCCATCATAGGCAGTGGTCCGTGGAGTCGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378426.5
CDS-3UTR CAA 90 bp GGCCGACTCCACGGACCACTGCCTATGATGGGGCAGTCATTGCGCAGTTTGGGATTCTATTTCATTGACTaGGCTCTCACTCAGGTAAGT +
Preference number: 5 (lower is better)
Translates to: GRLHGPLPMMGQSLRSLGFYFID*ALTQVS
Trigger: ACTTACCTGAGTGAGAGCCAAGTCAATGAAATAGAA...TCCCAAACTGCGCAATGACTGCCCCATCATAGGCAGTGGTCCGTGGAGTCGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CAA 90 bp CCCATTCTACAGATGACATCCTTGGTGGGCGGCTGGATAGGCACACATCTTCACCCACTTCCAGTCGATTaGAGAGCTCTTCAGGCAACA +
Preference number: 5 (lower is better)
Translates to: PILQMTSLVGGWIGTHLHPLPVD*RALQAT
Trigger: TGTTGCCTGAAGAGCTCTCAAATCGACTGGAAGTGG...GTGAAGATGTGTGCCTATCCAGCCGCCCACCAAGGATGTCATCTGTAGAATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CAA 90 bp GGATCCTGGGTGAATAGGAATAGGACTTGCCTGCCAGTGGGTGGAGCACTCCAGAAGTTACAGGCACATTaGCACTCATCTGGGCTTTAC +
Preference number: 5 (lower is better)
Translates to: GSWVNRNRTCLPVGGALQKLQAH*HSSGLY
Trigger: GTAAAGCCCAGATGAGTGCAAATGTGCCTGTAACTT...CTGGAGTGCTCCACCCACTGGCAGGCAAGTCCTATTCCTATTCACCCAGGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CAA 90 bp CACAGGCAACTTGACCCAGTTAAGTACCACTGGCCTTGGAAACAAGTAGATGCGATGATGGGGCAGTCATaGCGCAGTTTGGGAAACCAG +
Preference number: 5 (lower is better)
Translates to: HRQLDPVKYHWPWKQVDAMMGQS*RSLGNQ
Trigger: CTGGTTTCCCAAACTGCGCAATGACTGCCCCATCAT...CGCATCTACTTGTTTCCAAGGCCAGTGGTACTTAACTGGGTCAAGTTGCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CAA 90 bp GCGCGAGTCACTGCGCCCAGCTGCTATACATTGTTAAACCTTTTGCTTTCTAGTATGATGGGGCAGTCATaGCGCAGTTTGGGAAACCAG +
Preference number: 5 (lower is better)
Translates to: ARVTAPSCYTLLNLLLSSMMGQS*RSLGNQ
Trigger: CTGGTTTCCCAAACTGCGCAATGACTGCCCCATCAT...ACTAGAAAGCAAAAGGTTTAACAATGTATAGCAGCTGGGCGCAGTGACTCGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CAA 90 bp CAGCATCGCTTCATTCTTTCCAACAGTTGCATAAGATCCTGTAGTATGGATGTGGCCTTCACCCAGTTCTaGTACTCGGCGCAGTTGAGG +
Preference number: 5 (lower is better)
Translates to: QHRFILSNSCIRSCSMDVAFTQF*YSAQLR
Trigger: CCTCAACTGCGCCGAGTACAAGAACTGGGTGAAGGC...CACATCCATACTACAGGATCTTATGCAACTGTTGGAAAGAATGAAGCGATGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CAA 90 bp AGAGCGGACAAATCCAGTAAGATGACAGTTCGTATACCATCATCCATACCTTACTCCTCAGGTCCTTGTTaGTCTGCTAGTCCTCGGGGC +
Preference number: 5 (lower is better)
Translates to: RADKSSKMTVRIPSSIPYSSGPC*SASPRG
Trigger: GCCCCGAGGACTAGCAGACAAACAAGGACCTGAGGA...GTAAGGTATGGATGATGGTATACGAACTGTCATCTTACTGGATTTGTCCGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CAA 90 bp ATGGGGCAGTCATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGAGTGGATTCTATTTCATTGACTaGGCTCTCACTCAGGTAAGT +
Preference number: 5 (lower is better)
Translates to: MGQSLRSLGNQQEELRSGFYFID*ALTQVS
Trigger: ACTTACCTGAGTGAGAGCCAAGTCAATGAAATAGAA...TCCACTCCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAATGACTGCCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CAA 90 bp AAATCCAGTAAGATGACAGTTCGTATACCATCATCCATACCTTACACATCCTTGCCTGGGCCCACCTCCTaGCCCTACTGCCTTAGGCTA +
Preference number: 5 (lower is better)
Translates to: KSSKMTVRIPSSIPYTSLPGPTS*PYCLRL
Trigger: TAGCCTAAGGCAGTAGGGCAAGGAGGTGGGCCCAGG...CAAGGATGTGTAAGGTATGGATGATGGTATACGAACTGTCATCTTACTGGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CAA 90 bp ATGGGGCAGTCATTGCGCAGTTTGGGAAACCAGCAGGAGGAACTCAGGAGTGGAAGGCAATGTTTCTTCTaGCTTTCCTCTAAAAAGGAA +
Preference number: 5 (lower is better)
Translates to: MGQSLRSLGNQQEELRSGRQCFF*LSSKKE
Trigger: TTCCTTTTTAGAGGAAAGCAAGAAGAAACATTGCCT...TCCACTCCTGAGTTCCTCCTGCTGGTTTCCCAAACTGCGCAATGACTGCCCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CAA 90 bp TTACAGGCACATTTGCACTCATCTGGGCTTTACAAAGTGATATTAAGTGCATTTCCTGGGCCCACCTCCTaGCCCTACTGCCTTAGGCTA +
Preference number: 5 (lower is better)
Translates to: LQAHLHSSGLYKVILSAFPGPTS*PYCLRL
Trigger: TAGCCTAAGGCAGTAGGGCAAGGAGGTGGGCCCAGG...AAATGCACTTAATATCACTTTGTAAAGCCCAGATGAGTGCAAATGTGCCTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CAA 90 bp CAGCATCGCTTCATTCTTTCCAACAGTTGCATAAGATCCTGTAGTATGGATGTGGCTGTACACATCCTGTaGTGCACACCCTTGTGCCCA +
Preference number: 5 (lower is better)
Translates to: QHRFILSNSCIRSCSMDVAVHIL*CTPLCP
Trigger: TGGGCACAAGGGTGTGCACAACAGGATGTGTACAGC...CACATCCATACTACAGGATCTTATGCAACTGTTGGAAAGAATGAAGCGATGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CAA 90 bp AGGCAACTTGACCCAGTTAAGTACCACTGGCCTTGGAAACAAGTAGATGCGGGGCTTCAGATTAGATTGTaGTGTGTTCATGATGGCCTC +
Preference number: 5 (lower is better)
Translates to: RQLDPVKYHWPWKQVDAGLQIRL*CVHDGL
Trigger: GAGGCCATCATGAACACACAACAATCTAATCTGAAG...CCCCGCATCTACTTGTTTCCAAGGCCAGTGGTACTTAACTGGGTCAAGTTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378426.5
CDS-3UTR CAA 90 bp CCCATTCTACAGATGACATCCTTGGTGGGCGGCTGGATAGGCACACATCTTCACCTCTTGTTCTTCTGCTaGAAGATATATCTCTTGAAG +
Preference number: 5 (lower is better)
Translates to: PILQMTSLVGGWIGTHLHLLFFC*KIYLLK
Trigger: CTTCAAGAGATATATCTTCAAGCAGAAGAACAAGAG...GTGAAGATGTGTGCCTATCCAGCCGCCCACCAAGGATGTCATCTGTAGAATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS TCA 90 bp TTCCTGTCAGGTGTTTGTCTCCCAGGTTCCTGTGAATCCAGTTTTTaGTGTAGACAGAGGCTGTCTAGCTTCTGCATATCTTCTGTAAGG +
Preference number: 5 (lower is better)
Translates to: FLSGVCLPGSCESSF*CRQRLSSFCISSVR
Trigger: CCTTACAGAAGATATGCAGAAGCTAGACAGCCTCTGTCTACATCAAAAACTGGATTCACAGGAACCTGGGAGACAAACACCTGACAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327877.10
ENST00000378421.1
ENST00000378426.5
CDS-3UTR CAA 90 bp AAGATTCCATTTGATCCCAAGTTTTGTACCTCACATCTAGAAGCTCTGAAATATCACCATGTCTCCCACTaGGAACCAGGAGGTTGCGGG +
Preference number: 5 (lower is better)
Translates to: KIPFDPKFCTSHLEALKYHHVSH*EPGGCG
Trigger: CCCGCAACCTCCTGGTTCCAAGTGGGAGACATGGTG...ATATTTCAGAGCTTCTAGATGTGAGGTACAAAACTTGGGATCAAATGGAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CAA 90 bp TTACAGGCACATTTGCACTCATCTGGGCTTTACAAAGTGATATTAAGTGCATTTCTGTTGTGCACACCCTaGTGCCCAGGTGCACAGTTC +
Preference number: 5 (lower is better)
Translates to: LQAHLHSSGLYKVILSAFLLCTP*CPGAQF
Trigger: GAACTGTGCACCTGGGCACAAGGGTGTGCACAACAG...AAATGCACTTAATATCACTTTGTAAAGCCCAGATGAGTGCAAATGTGCCTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CAA 90 bp GCGCGAGTCACTGCGCCCAGCTGCTATACATTGTTAAACCTTTTGCTTTCTAGTAGGCAATGTTTCTTCTaGCTTTCCTCTAAAAAGGAA +
Preference number: 5 (lower is better)
Translates to: ARVTAPSCYTLLNLLLSSRQCFF*LSSKKE
Trigger: TTCCTTTTTAGAGGAAAGCAAGAAGAAACATTGCCT...ACTAGAAAGCAAAAGGTTTAACAATGTATAGCAGCTGGGCGCAGTGACTCGCGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CAA 90 bp AAATCCAGTAAGATGACAGTTCGTATACCATCATCCATACCTTACACATCCTTGAGGTCCACAGGCAACTaGACCCAGTTAAGTACCACT +
Preference number: 5 (lower is better)
Translates to: KSSKMTVRIPSSIPYTSLRSTGN*TQLSTT
Trigger: AGTGGTACTTAACTGGGTCAAGTTGCCTGTGGACCT...CAAGGATGTGTAAGGTATGGATGATGGTATACGAACTGTCATCTTACTGGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CAA 90 bp AAGATTCCATTTGATCCCAAGTTTTGTACCTCACATCTAGAAGCTCTGAAATATACATCTTCACTGGGCTaGGAATGGAGCCTTTCCTGC +
Preference number: 5 (lower is better)
Translates to: KIPFDPKFCTSHLEALKYTSSLG*EWSLSC
Trigger: GCAGGAAAGGCTCCATTCCAAGCCCAGTGAAGATGT...ATATTTCAGAGCTTCTAGATGTGAGGTACAAAACTTGGGATCAAATGGAATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS TCA 90 bp CGACATTTAATTACCTCTGTGACTTTCTTTCGATCAACCACGAAGTaGTCGCAGGAGTTGATGAGACTTAAAAGAGCAACTGCATCACAT +
Preference number: 5 (lower is better)
Translates to: RHLITSVTFFRSTTK*SQELMRLKRATASH
Trigger: ATGTGATGCAGTTGCTCTTTTAAGTCTCATCAACTCCTGCGATCACTTCGTGGTTGATCGAAAGAAAGTCACAGAGGTAATTAAATGTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327877.10
ENST00000378421.1
ENST00000378426.5
CDS-3UTR CAA 90 bp AAGATTCCATTTGATCCCAAGTTTTGTACCTCACATCTAGAAGCTCTGAAATATCCACTTCCAGTCGATTaGAGAGCTCTTCAGGCAACA +
Preference number: 5 (lower is better)
Translates to: KIPFDPKFCTSHLEALKYPLPVD*RALQAT
Trigger: TGTTGCCTGAAGAGCTCTCAAATCGACTGGAAGTGG...ATATTTCAGAGCTTCTAGATGTGAGGTACAAAACTTGGGATCAAATGGAATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS CCA 90 bp AGCTGTGACCTTGGTCAAGTTACCCTCAGATTCCTTATCAGTAAATaGGGGATAACTGTCCTTATCTACTTCAAAGGATATTGTGAGAAT +
Preference number: 5 (lower is better)
Translates to: SCDLGQVTLRFLISK*GITVLIYFKGYCEN
Trigger: ATTCTCACAATATCCTTTGAAGTAGATAAGGACAGTTATCCCCCATTTACTGATAAGGAATCTGAGGGTAACTTGACCAAGGTCACAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378421.1
CDS TCA 90 bp CTTCATCTGAAAATCTCGAAGCCACGTAGAAGATACTTTCATCTCTaGAGAGTGCATGATCTCATTACGACATTTAATTACCTCTGTGAC +
Preference number: 5 (lower is better)
Translates to: LHLKISKPRRRYFHL*RVHDLITTFNYLCD
Trigger: GTCACAGAGGTAATTAAATGTCGTAATGAGATCATGCACTCTTCAGAGATGAAAGTATCTTCTACGTGGCTTCGAGATTTTCAGATGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327877.10
ENST00000378421.1
ENST00000378426.5
CDS-3UTR CAA 90 bp AACAACTTTCCAGACCTCTACTATTCTAAAACACAAAGAGCATTACAGCTTGCTCCCAGCTGCTATACATaGTTAAACCTTTTGCTTTCT +
Preference number: 5 (lower is better)
Translates to: NNFPDLYYSKTQRALQLAPSCYT*LNLLLS
Trigger: AGAAAGCAAAAGGTTTAACAATGTATAGCAGCTGGG...AGCAAGCTGTAATGCTCTTTGTGTTTTAGAATAGTAGAGGTCTGGAAAGTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS TCA 90 bp TCTGGGATGTTCTTGAATTCATTCAGAAAATTTTGGATCTTCATCTaGAAATCTCGAAGCCACGTAGAAGATACTTTCATCTCTGAAGAG +
Preference number: 5 (lower is better)
Translates to: SGMFLNSFRKFWIFI*KSRSHVEDTFISEE
Trigger: CTCTTCAGAGATGAAAGTATCTTCTACGTGGCTTCGAGATTTTCAGATGAAGATCCAAAATTTTCTGAATGAATTCAAGAACATCCCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327877.10
ENST00000378421.1
ENST00000378426.5
CDS-3UTR CAA 90 bp AACAACTTTCCAGACCTCTACTATTCTAAAACACAAAGAGCATTACAGCTTGCTCTCTTGTTCTTCTGCTaGAAGATATATCTCTTGAAG +
Preference number: 5 (lower is better)
Translates to: NNFPDLYYSKTQRALQLALLFFC*KIYLLK
Trigger: CTTCAAGAGATATATCTTCAAGCAGAAGAACAAGAG...AGCAAGCTGTAATGCTCTTTGTGTTTTAGAATAGTAGAGGTCTGGAAAGTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS-3UTR CAA 90 bp TTACAGGCACATTTGCACTCATCTGGGCTTTACAAAGTGATATTAAGTGCATTTAAACTTCAGATTAGATaGTTGTGTGTTCATGATGGC +
Preference number: 5 (lower is better)
Translates to: LQAHLHSSGLYKVILSAFKLQIR*LCVHDG
Trigger: GCCATCATGAACACACAACAATCTAATCTGAAGTTT...AAATGCACTTAATATCACTTTGTAAAGCCCAGATGAGTGCAAATGTGCCTGTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378426.5
CDS CCA 72 bp GGGGCGGTGGTCAAGGCCCCGAGCCAGGTGCTCACCTaGCGGGCGCGAGGGCTGCACCGTGAGCCGCCGCGG +
Preference number: 6 (lower is better)
Translates to: GAVVKAPSQVLT*RARGLHREPPR
Trigger: CCGCGGCGGCTCACGGTGCAGCCCTCGCGCCCGCCAGGTGAGCACCTGGCTCGGGGCCTTGACCACCGCCCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378426.5
CDS CCA 72 bp GGCCCCAGGCCGGGGGCTGCGGCGAGTAGGCCGCGGTaGAAGGAGAGCACCTCGCGGCCGACGAAACCCTGC +
Preference number: 6 (lower is better)
Translates to: GPRPGAAASRPR*KESTSRPTKPC
Trigger: GCAGGGTTTCGTCGGCCGCGAGGTGCTCTCCTTCCACCGCGGCCTACTCGCCGCAGCCCCCGGCCTGGGGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327877.10
ENST00000378421.1
ENST00000378426.5
CDS GCA 72 bp AGAGCACCTCGCGGCCGACGAAACCCTGCAGGCAGCTaGGCAGCAGTAACAGGCAGTGGCCCGCCTTCACCC +
Preference number: 6 (lower is better)
Translates to: RAPRGRRNPAGS*AAVTGSGPPSP
Trigger: GGGTGAAGGCGGGCCACTGCCTGTTACTGCTGCGCAGCTGCCTGCAGGGTTTCGTCGGCCGCGAGGTGCTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327877.10
ENST00000378421.1
ENST00000378426.5
CDS GCA 72 bp CGGTGGAAGGAGAGCACCTCGCGGCCGACGAAACCCTaGAGGCAGCTGCGCAGCAGTAACAGGCAGTGGCCC +
Preference number: 6 (lower is better)
Translates to: RWKESTSRPTKP*RQLRSSNRQWP
Trigger: GGGCCACTGCCTGTTACTGCTGCGCAGCTGCCTGCAGGGTTTCGTCGGCCGCGAGGTGCTCTCCTTCCACCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327877.10
ENST00000378421.1
ENST00000378426.5
CDS CAA 90 bp CAGCTGCGCAGCAGTAACAGGCAGTGGCCCGCCTTCACCCAGTTCTaGTACTCGGCGCAGTTGAGGCGCGCCGCTAGCTCCGACAGCACC +
Preference number: 6 (lower is better)
Translates to: QLRSSNRQWPAFTQF*YSAQLRRAASSDST
Trigger: GGTGCTGTCGGAGCTAGCGGCGCGCCTCAACTGCGCCGAGTACAAGAACTGGGTGAAGGCGGGCCACTGCCTGTTACTGCTGCGCAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327877.10
ENST00000378421.1
ENST00000378426.5
CDS TCA 72 bp GGCCCGCCTTCACCCAGTTCTTGTACTCGGCGCAGTTaGGGCGCGCCGCTAGCTCCGACAGCACCATGTCTC +
Preference number: 6 (lower is better)
Translates to: GPPSPSSCTRRS*GAPLAPTAPCL
Trigger: GAGACATGGTGCTGTCGGAGCTAGCGGCGCGCCTCAACTGCGCCGAGTACAAGAACTGGGTGAAGGCGGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS CAA 72 bp TGGCCCGCCTTCACCCAGTTCTTGTACTCGGCGCAGTaGAGGCGCGCCGCTAGCTCCGACAGCACCATGTCT +
Preference number: 6 (lower is better)
Translates to: WPAFTQFLYSAQ*RRAASSDSTMS
Trigger: AGACATGGTGCTGTCGGAGCTAGCGGCGCGCCTCAACTGCGCCGAGTACAAGAACTGGGTGAAGGCGGGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378426.5
CDS CAA 72 bp AGCAGTAACAGGCAGTGGCCCGCCTTCACCCAGTTCTaGTACTCGGCGCAGTTGAGGCGCGCCGCTAGCTCC +
Preference number: 6 (lower is better)
Translates to: SSNRQWPAFTQF*YSAQLRRAASS
Trigger: GGAGCTAGCGGCGCGCCTCAACTGCGCCGAGTACAAGAACTGGGTGAAGGCGGGCCACTGCCTGTTACTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327877.10
ENST00000378421.1
ENST00000378426.5
CDS CCA 72 bp AAACCCTGCAGGCAGCTGCGCAGCAGTAACAGGCAGTaGCCCGCCTTCACCCAGTTCTTGTACTCGGCGCAG +
Preference number: 6 (lower is better)
Translates to: KPCRQLRSSNRQ*PAFTQFLYSAQ
Trigger: CTGCGCCGAGTACAAGAACTGGGTGAAGGCGGGCCACTGCCTGTTACTGCTGCGCAGCTGCCTGCAGGGTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327877.10
ENST00000378421.1
ENST00000378426.5
CDS TCA 72 bp CCTCAGGTCCTTGTTTGTCTGCTAGTCCTCGGGGCATaGAGGCCTATAGCAAGGGAGGGAGGAGGGGGACCT +
Preference number: 6 (lower is better)
Translates to: PQVLVCLLVLGA*RPIAREGGGGP
Trigger: AGGTCCCCCTCCTCCCTCCCTTGCTATAGGCCTTCATGCCCCGAGGACTAGCAGACAAACAAGGACCTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378421.1
ENST00000378426.5
CDS CAA 72 bp AAAAGAGCAACTGCATCACATTCCTCAGGTCCTTGTTaGTCTGCTAGTCCTCGGGGCATGAAGGCCTTGGCC +
Preference number: 6 (lower is better)
Translates to: KRATASHSSGPC*SASPRGMKALA
Trigger: GGCCAAGGCCTTCATGCCCCGAGGACTAGCAGACAAACAAGGACCTGAGGAATGTGATGCAGTTGCTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327877.10
CDS CAA 90 bp ATGAGACTTAAAAGAGCAACTGCATCACATTCCTCAGGTCCTTGTTaGTCTGCTAGTCCTCGGGGCATGAAGGCCTTGGCCACCTCCCAG +
Preference number: 6 (lower is better)
Translates to: MRLKRATASHSSGPC*SASPRGMKALATSQ
Trigger: CTGGGAGGTGGCCAAGGCCTTCATGCCCCGAGGACTAGCAGACAAACAAGGACCTGAGGAATGTGATGCAGTTGCTCTTTTAAGTCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327877.10
CDS CAA 90 bp ATGAGACTTAAAAGAGCAACTGCATCACATTCCTCAGGTCCTTGTTaGTCTGCTAGTCCTCGGGGCATGAAGGCCTATAGCAAGGGAGGG +
Preference number: 6 (lower is better)
Translates to: MRLKRATASHSSGPC*SASPRGMKAYSKGG
Trigger: CCCTCCCTTGCTATAGGCCTTCATGCCCCGAGGACTAGCAGACAAACAAGGACCTGAGGAATGTGATGCAGTTGCTCTTTTAAGTCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378421.1
ENST00000378426.5
CDS TCA 72 bp GAGATGGAAGCCATGCTGACTTTCACAGAACATGCCTaGTTTTTGTTGACGGGCAACCTCAGGCCTTCCTGT +
Preference number: 6 (lower is better)
Translates to: EMEAMLTFTEHA*FLLTGNLRPSC
Trigger: ACAGGAAGGCCTGAGGTTGCCCGTCAACAAAAATCAGGCATGTTCTGTGAAAGTCAGCATGGCTTCCATCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327877.10
ENST00000378421.1
CDS CAA 72 bp AAAAGAGCAACTGCATCACATTCCTCAGGTCCTTGTTaGTCTGCTAGTCCTCGGGGCATGAAGGCCTATAGC +
Preference number: 6 (lower is better)
Translates to: KRATASHSSGPC*SASPRGMKAYS
Trigger: GCTATAGGCCTTCATGCCCCGAGGACTAGCAGACAAACAAGGACCTGAGGAATGTGATGCAGTTGCTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378421.1
ENST00000378426.5
CDS CAA 72 bp CTAGATATGCCAGAAGGGCCTCAAGCTAGCAGGATCTaGCCTTTAGTAGGAATTTTATGGCACAGACCCCCA +
Preference number: 6 (lower is better)
Translates to: LDMPEGPQASRI*PLVGILWHRPP
Trigger: TGGGGGTCTGTGCCATAAAATTCCTACTAAAGGCAAGATCCTGCTAGCTTGAGGCCCTTCTGGCATATCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378421.1
CDS TCA 72 bp GGTGTTTGTCTCCCAGGTTCCTGTGAATCCAGTTTTTaGTGTAGACAGAGGCTGTCTAGCTTCTGCATATCT +
Preference number: 6 (lower is better)
Translates to: GVCLPGSCESSF*CRQRLSSFCIS
Trigger: AGATATGCAGAAGCTAGACAGCCTCTGTCTACATCAAAAACTGGATTCACAGGAACCTGGGAGACAAACACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327877.10
ENST00000378421.1
ENST00000378426.5
CDS CCA 72 bp CAAAATGCAAGTAGGGAAACTGTCACAGCTAAACCTTaGCCAAGGGCAATAACTGAAGGGCTGTATTATCCC +
Preference number: 6 (lower is better)
Translates to: QNASRETVTAKP*PRAITEGLYYP
Trigger: GGGATAATACAGCCCTTCAGTTATTGCCCTTGGCCAAGGTTTAGCTGTGACAGTTTCCCTACTTGCATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378421.1
CDS CAA 72 bp GTTCCGTATGGAAGTATTATATTAAGAGTCTGGGCTTaGGAGTGCAAACTGGGTTCAAATGCCAGCTCTGCC +
Preference number: 6 (lower is better)
Translates to: VPYGSIILRVWA*ECKLGSNASSA
Trigger: GGCAGAGCTGGCATTTGAACCCAGTTTGCACTCCAAAGCCCAGACTCTTAATATAATACTTCCATACGGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378421.1
CDS CAA 72 bp TTCAAATGCCAGCTCTGCCATTTGCCAGCTGTGACCTaGGTCAAGTTACCCTCAGATTCCTTATCAGTAAAT +
Preference number: 6 (lower is better)
Translates to: FKCQLCHLPAVT*VKLPSDSLSVN
Trigger: ATTTACTGATAAGGAATCTGAGGGTAACTTGACCAAGGTCACAGCTGGCAAATGGCAGAGCTGGCATTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378421.1
CDS GCA 72 bp GTCAGACGTCAACAGCTGTTCTATTCTGGAGTATACTaGCACAATCTCTGGGATGTTCTTGAATTCATTCAG +
Preference number: 6 (lower is better)
Translates to: VRRQQLFYSGVY*HNLWDVLEFIQ
Trigger: CTGAATGAATTCAAGAACATCCCAGAGATTGTGGCAGTATACTCCAGAATAGAACAGCTGTTGACGTCTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327877.10
ENST00000378421.1
ENST00000378426.5
CDS TCA 72 bp ATTACCTCTGTGACTTTCTTTCGATCAACCACGAAGTaGTCGCAGGAGTTGATGAGACTTAAAAGAGCAACT +
Preference number: 6 (lower is better)
Translates to: ITSVTFFRSTTK*SQELMRLKRAT
Trigger: AGTTGCTCTTTTAAGTCTCATCAACTCCTGCGATCACTTCGTGGTTGATCGAAAGAAAGTCACAGAGGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327877.10
ENST00000378421.1
ENST00000378426.5
CDS CAA 90 bp TCTAGCTTCTGCATATCTTCTGTAAGGCCATTTCTAAGATCCTCATaGTTTCTCAGAAATTCCTTCACCACTTCCAGTCGATTTGAGAGC +
Preference number: 6 (lower is better)
Translates to: SSFCISSVRPFLRSS*FLRNSFTTSSRFES
Trigger: GCTCTCAAATCGACTGGAAGTGGTGAAGGAATTTCTGAGAAACAATGAGGATCTTAGAAATGGCCTTACAGAAGATATGCAGAAGCTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327877.10
ENST00000378421.1
ENST00000378426.5
CDS CAA 72 bp TGCATATCTTCTGTAAGGCCATTTCTAAGATCCTCATaGTTTCTCAGAAATTCCTTCACCACTTCCAGTCGA +
Preference number: 6 (lower is better)
Translates to: CISSVRPFLRSS*FLRNSFTTSSR
Trigger: TCGACTGGAAGTGGTGAAGGAATTTCTGAGAAACAATGAGGATCTTAGAAATGGCCTTACAGAAGATATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327877.10
ENST00000378421.1
ENST00000378426.5
CDS CAA 90 bp TACTGCCACAATCTCTGGGATGTTCTTGAATTCATTCAGAAAATTTaGGATCTTCATCTGAAAATCTCGAAGCCACGTAGAAGATACTTT +
Preference number: 6 (lower is better)
Translates to: YCHNLWDVLEFIQKI*DLHLKISKPRRRYF
Trigger: AAAGTATCTTCTACGTGGCTTCGAGATTTTCAGATGAAGATCCAAAATTTTCTGAATGAATTCAAGAACATCCCAGAGATTGTGGCAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327877.10
ENST00000378421.1
ENST00000378426.5
CDS TCA 72 bp AAAATCTCGAAGCCACGTAGAAGATACTTTCATCTCTaGAGAGTGCATGATCTCATTACGACATTTAATTAC +
Preference number: 6 (lower is better)
Translates to: KISKPRRRYFHL*RVHDLITTFNY
Trigger: GTAATTAAATGTCGTAATGAGATCATGCACTCTTCAGAGATGAAAGTATCTTCTACGTGGCTTCGAGATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327877.10
ENST00000378421.1
ENST00000378426.5
CDS CAA 72 bp AATCTCTGGGATGTTCTTGAATTCATTCAGAAAATTTaGGATCTTCATCTGAAAATCTCGAAGCCACGTAGA +
Preference number: 6 (lower is better)
Translates to: NLWDVLEFIQKI*DLHLKISKPRR
Trigger: TCTACGTGGCTTCGAGATTTTCAGATGAAGATCCAAAATTTTCTGAATGAATTCAAGAACATCCCAGAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327877.10
ENST00000378421.1
ENST00000378426.5