RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CXCR3 (Homo sapiens)

Ensembl gene IDs: ENSG00000186810

Ensembl transcript IDs: ENST00000373691.4, ENST00000373693.4

Found 186 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGGGACCATGGCCACAGTCACTGCTGAGCTGGAGGCCTGGGCTGTaGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCC +
Preference number: 1 (lower is better)
Translates to: WGPWPQSLLSWRPGL*LHGAAPSTPCLVLP
Trigger: GGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACAGCCCAGGCCTCCAGCTCAGCAGTGACTGTGGCCATGGTCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
3UTR-3UTR CCA 90 bp GGCTGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACCCTCGGGCGGCAGGATaGGGCTTGGCAGCTAAGGAG +
Preference number: 2 (lower is better)
Translates to: GCGFMGQHPLRHALYSPHPRAAG*GLAAKE
Trigger: CTCCTTAGCTGCCAAGCCCCATCCTGCCGCCCGAGG...GTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
3UTR-3UTR CCA 90 bp GGCTGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACCGGGAGCGAGGATATTaGGGAGAGCCAGAGCCGGCA +
Preference number: 2 (lower is better)
Translates to: GCGFMGQHPLRHALYSPHRERGY*GEPEPA
Trigger: TGCCGGCTCTGGCTCTCCCCAATATCCTCGCTCCCG...GTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
3UTR-3UTR CCA 90 bp GGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGGGTGCAGTCCTCAGAGCTaGGAGGGTGGCTTCCCGGGA +
Preference number: 2 (lower is better)
Translates to: GFMGQHPLRHALYSPHLGCSPQS*EGGFPG
Trigger: TCCCGGGAAGCCACCCTCCCAGCTCTGAGGACTGCA...CCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
3UTR-3UTR CCA 90 bp TGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGCGGGAGCGAGGATATTaGGGAGAGCCAGAGCCGGCA +
Preference number: 2 (lower is better)
Translates to: CGFMGQHPLRHALYSPHLRERGY*GEPEPA
Trigger: TGCCGGCTCTGGCTCTCCCCAATATCCTCGCTCCCG...CAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
3UTR-3UTR GCA 90 bp TGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGGGAGGAGCCTGGAATaGGGGGAAGTCAGACTGTGG +
Preference number: 2 (lower is better)
Translates to: CGFMGQHPLRHALYSPHLGRSLE*GEVRLW
Trigger: CCACAGTCTGACTTCCCCGCATTCCAGGCTCCTCCC...CAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
3UTR-3UTR GCA 90 bp GGCTGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACAAGGAGCAGCAATGGTaGAGTCCTCAGAGCTGGGAG +
Preference number: 2 (lower is better)
Translates to: GCGFMGQHPLRHALYSPHKEQQW*SPQSWE
Trigger: CTCCCAGCTCTGAGGACTGCACCATTGCTGCTCCTT...GTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
3UTR-3UTR CCA 90 bp TGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGAGGGAGGGAGGAGCCTaGAATGCGGGGAAGTCAGAC +
Preference number: 2 (lower is better)
Translates to: CGFMGQHPLRHALYSPHLREGGA*NAGKSD
Trigger: GTCTGACTTCCCCGCATTCCAGGCTCCTCCCTCCCT...CAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
3UTR-3UTR CCA 90 bp GGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGGGGCTAAGGAGCAGCAATaGTGCAGTCCTCAGAGCTGG +
Preference number: 2 (lower is better)
Translates to: GFMGQHPLRHALYSPHLGAKEQQ*CSPQSW
Trigger: CCAGCTCTGAGGACTGCACCATTGCTGCTCCTTAGC...CCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
3UTR-3UTR CCA 90 bp GCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGGGAAGATGAAGTTCCTCGGGCGGCAGGATaGGGCTTGGCAGCTAAGGAG +
Preference number: 2 (lower is better)
Translates to: AAPSTPCLVLPALGEDEVPRAAG*GLAAKE
Trigger: CTCCTTAGCTGCCAAGCCCCATCCTGCCGCCCGAGG...AACTTCATCTTCCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
3UTR-3UTR GCA 90 bp GCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGGGAAGATGAAGTTGGGAGGAGCCTGGAATaGGGGGAAGTCAGACTGTGG +
Preference number: 2 (lower is better)
Translates to: AAPSTPCLVLPALGEDEVGRSLE*GEVRLW
Trigger: CCACAGTCTGACTTCCCCGCATTCCAGGCTCCTCCC...AACTTCATCTTCCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
3UTR-3UTR CAA 90 bp GGCTGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACCCGGGAGCGAGGATATaGGGGAGAGCCAGAGCCGGC +
Preference number: 3 (lower is better)
Translates to: GCGFMGQHPLRHALYSPHPGARI*GRARAG
Trigger: GCCGGCTCTGGCTCTCCCCAATATCCTCGCTCCCGG...GTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
3UTR-3UTR CAA 90 bp GGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGGGGCGGCAGGATGGGGCTaGGCAGCTAAGGAGCAGCAA +
Preference number: 3 (lower is better)
Translates to: GFMGQHPLRHALYSPHLGAAGWG*AAKEQQ
Trigger: TTGCTGCTCCTTAGCTGCCAAGCCCCATCCTGCCGC...CCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
3UTR CCA 72 bp GCAGCTAAGGAGCAGCAATGGTGCAGTCCTCAGAGCTaGGAGGGTGGCTTCCCGGGAGACCTGGTGGTGCTG +
Preference number: 3 (lower is better)
Translates to: AAKEQQWCSPQS*EGGFPGDLVVL
Trigger: CAGCACCACCAGGTCTCCCGGGAAGCCACCCTCCCAGCTCTGAGGACTGCACCATTGCTGCTCCTTAGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
3UTR CCA 72 bp TGGCCACAGTCACTGCTGAGCTGGAGGCCTGGGCTGTaGCTTCATGGGGCAGCACCCTCTACGCCATGCCTT +
Preference number: 3 (lower is better)
Translates to: WPQSLLSWRPGL*LHGAAPSTPCL
Trigger: AAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACAGCCCAGGCCTCCAGCTCAGCAGTGACTGTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
3UTR-3UTR CAA 90 bp GCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGGGAAGATGAAGTTGCGGCAGGATGGGGCTaGGCAGCTAAGGAGCAGCAA +
Preference number: 3 (lower is better)
Translates to: AAPSTPCLVLPALGEDEVAAGWG*AAKEQQ
Trigger: TTGCTGCTCCTTAGCTGCCAAGCCCCATCCTGCCGC...AACTTCATCTTCCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR TCA 90 bp GGCTGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACAGACAGCCAGGCAGGTaGGGGTCACGCGGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: GCGFMGQHPLRHALYSPHRQPGR*GSRGPG
Trigger: CCCCGGCCCGCGTGACCCTCACCTGCCTGGCTGTCT...GTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp GCCTGGAATGCGGGGAAGTCAGACTGTGGGCGAAAGGGGAGCCCGGATTCCGGCGGCGCCGCTGGCCCCTaGAAACCAGCAGCACGGCCA +
Preference number: 4 (lower is better)
Translates to: AWNAGKSDCGRKGSPDSGGAAGP*KPAARP
Trigger: TGGCCGTGCTGCTGGTTTCCAGGGGCCAGCGGCGCC...GCCGGAATCCGGGCTCCCCTTTCGCCCACAGTCTGACTTCCCCGCATTCCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp AGGGAGGGAGGAGCCTGGAATGCGGGGAAGTCAGACTGTGGGCGAAAGGGGAGCGCCCGCAGGCGCCGCTaGCCCCTGGAAACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: REGGAWNAGKSDCGRKGSARRRR*PLETSS
Trigger: GCTGCTGGTTTCCAGGGGCCAGCGGCGCCTGCGGGC...GCTCCCCTTTCGCCCACAGTCTGACTTCCCCGCATTCCAGGCTCCTCCCTCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR TCA 90 bp GGCTGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACGGCAGTGGGTGGCGTTaGGGCGCTCGTCGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: GCGFMGQHPLRHALYSPHGSGWR*GARRGG
Trigger: CCCACCACGACGAGCGCCTCAACGCCACCCACTGCC...GTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR GCA 90 bp GCTGGGGCTGCCAGTGAGTCCCGGGAGCGAGGATATTGGGGAGAGCCAGAGCCGCCATGGCTGGGCTGGTaGTCTGGCTGCTGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: AGAASESRERGYWGEPEPPWLGW*SGCWVV
Trigger: CACCACCCAGCAGCCAGAGCACCAGCCCAGCCATGG...CGGCTCTGGCTCTCCCCAATATCCTCGCTCCCGGGACTCACTGGCAGCCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR GCA 90 bp GCTGGGGCTGCCAGTGAGTCCCGGGAGCGAGGATATTGGGGAGAGCCAGAGCCGGCAGGAAGGTGTCGGTaGTGCTCAGGGCTGTCCGCC +
Preference number: 4 (lower is better)
Translates to: AGAASESRERGYWGEPEPAGRCR*CSGLSA
Trigger: GGCGGACAGCCCTGAGCAGCACCGACACCTTCCTGC...CGGCTCTGGCTCTCCCCAATATCCTCGCTCCCGGGACTCACTGGCAGCCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR GCA 90 bp GCCTGGAATGCGGGGAAGTCAGACTGTGGGCGAAAGGGGAGCCCGGATTCCGGCGCACCCGCAGAGCCGTaGGGCCCACCTGTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: AWNAGKSDCGRKGSPDSGAPAEP*GPPVGS
Trigger: ACTTCCCACAGGTGGGCCGCACGGCTCTGCGGGTGC...GCCGGAATCCGGGCTCCCCTTTCGCCCACAGTCTGACTTCCCCGCATTCCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp GCTGGGGCTGCCAGTGAGTCCCGGGAGCGAGGATATTGGGGAGAGCCAGAGCCGGGACCATGGCTGGGCTaGTGCTCTGGCTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: AGAASESRERGYWGEPEPGPWLG*CSGCWV
Trigger: CACCCAGCAGCCAGAGCACCAGCCCAGCCATGGTCC...CGGCTCTGGCTCTCCCCAATATCCTCGCTCCCGGGACTCACTGGCAGCCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp GCTGGGGCTGCCAGTGAGTCCCGGGAGCGAGGATATTGGGGAGAGCCAGAGCCGGGAGCCCTCTCTGGTTaGGGCAGCCCAGGCGCAAGA +
Preference number: 4 (lower is better)
Translates to: AGAASESRERGYWGEPEPGALSG*GSPGAR
Trigger: TCTTGCGCCTGGGCTGCCCCAACCAGAGAGGGCTCC...CGGCTCTGGCTCTCCCCAATATCCTCGCTCCCGGGACTCACTGGCAGCCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp GCTGGGGCTGCCAGTGAGTCCCGGGAGCGAGGATATTGGGGAGAGCCAGAGCCGCCGGCGGGAAGACGATaGCTGCCTCTGGAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: AGAASESRERGYWGEPEPPAGRR*LPLEPS
Trigger: AGAGGGCTCCAGAGGCAGCCATCGTCTTCCCGCCGG...CGGCTCTGGCTCTCCCCAATATCCTCGCTCCCGGGACTCACTGGCAGCCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp GCTGGGGCTGCCAGTGAGTCCCGGGAGCGAGGATATTGGGGAGAGCCAGAGCCGCCTCGGGCGGCAGGATaGGGCTTGGCAGCTAAGGAG +
Preference number: 4 (lower is better)
Translates to: AGAASESRERGYWGEPEPPRAAG*GLAAKE
Trigger: CTCCTTAGCTGCCAAGCCCCATCCTGCCGCCCGAGG...CGGCTCTGGCTCTCCCCAATATCCTCGCTCCCGGGACTCACTGGCAGCCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR TCA 90 bp TGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGAGACAGCCAGGCAGGTaGGGGTCACGCGGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: CGFMGQHPLRHALYSPHLRQPGR*GSRGPG
Trigger: CCCCGGCCCGCGTGACCCTCACCTGCCTGGCTGTCT...CAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR GCA 90 bp GGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGGGCTGCCACCGCGCCGTTaGCCAGCAGCCCCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: GFMGQHPLRHALYSPHLGLPPRR*PAAPAE
Trigger: TTCTGCTGGGGCTGCTGGGCAACGGCGCGGTGGCAG...CCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR GCA 90 bp GGCTGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACCTGCCACCGCGCCGTTaGCCAGCAGCCCCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: GCGFMGQHPLRHALYSPHLPPRR*PAAPAE
Trigger: TTCTGCTGGGGCTGCTGGGCAACGGCGCGGTGGCAG...GTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR GCA 90 bp AGGGAGGGAGGAGCCTGGAATGCGGGGAAGTCAGACTGTGGGCGAAAGGGGAGCGGAAGGTGTCGGTGCTaGTCAGGGCTGTCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: REGGAWNAGKSDCGRKGSGRCRC*SGLSAG
Trigger: GCCGGCGGACAGCCCTGAGCAGCACCGACACCTTCC...GCTCCCCTTTCGCCCACAGTCTGACTTCCCCGCATTCCAGGCTCCTCCCTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR GCA 90 bp GGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGGGGGAAGGTGTCGGTGCTaGTCAGGGCTGTCCGCCGGC +
Preference number: 4 (lower is better)
Translates to: GFMGQHPLRHALYSPHLGGRCRC*SGLSAG
Trigger: GCCGGCGGACAGCCCTGAGCAGCACCGACACCTTCC...CCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR GCA 90 bp GCCTGGAATGCGGGGAAGTCAGACTGTGGGCGAAAGGGGAGCCCGGATTCCGGCGACGGCAGCGTCCACTaGCCAGAGCGGCAGTGTCAG +
Preference number: 4 (lower is better)
Translates to: AWNAGKSDCGRKGSPDSGDGSVH*PERQCQ
Trigger: CTGACACTGCCGCTCTGGGCAGTGGACGCTGCCGTC...GCCGGAATCCGGGCTCCCCTTTCGCCCACAGTCTGACTTCCCCGCATTCCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR GCA 90 bp GGCTGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACGCACCCGCAGAGCCGTaGGGCCCACCTGTGGGAAGT +
Preference number: 4 (lower is better)
Translates to: GCGFMGQHPLRHALYSPHAPAEP*GPPVGS
Trigger: ACTTCCCACAGGTGGGCCGCACGGCTCTGCGGGTGC...GTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp TGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGCCCGCAGGCGCCGCTaGCCCCTGGAAACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: CGFMGQHPLRHALYSPHLARRRR*PLETSS
Trigger: GCTGCTGGTTTCCAGGGGCCAGCGGCGCCTGCGGGC...CAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp AGGGAGGGAGGAGCCTGGAATGCGGGGAAGTCAGACTGTGGGCGAAAGGGGAGCCTCTGGAGCCCTCTCTaGTTGGGGCAGCCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: REGGAWNAGKSDCGRKGSLWSPL*LGQPRR
Trigger: GCGCCTGGGCTGCCCCAACCAGAGAGGGCTCCAGAG...GCTCCCCTTTCGCCCACAGTCTGACTTCCCCGCATTCCAGGCTCCTCCCTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR TCA 90 bp GGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGGGGTGGTCACTCACCTGTaGGGGCGGGAACGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: GFMGQHPLRHALYSPHLGVVTHL*GRERGG
Trigger: TCCTCCCCGTTCCCGCCCTCACAGGTGAGTGACCAC...CCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000373691.4
CDS-3UTR TCA 90 bp GCCTGGAATGCGGGGAAGTCAGACTGTGGGCGAAAGGGGAGCCCGGATTCCGGCAGCCCAGGCCTGAGGTaGCCGACTTGGCCACGTCTA +
Preference number: 4 (lower is better)
Translates to: AWNAGKSDCGRKGSPDSGSPGLR*PTWPRL
Trigger: TAGACGTGGCCAAGTCGGTCACCTCAGGCCTGGGCT...GCCGGAATCCGGGCTCCCCTTTCGCCCACAGTCTGACTTCCCCGCATTCCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR GCA 90 bp GCTGGGGCTGCCAGTGAGTCCCGGGAGCGAGGATATTGGGGAGAGCCAGAGCCGGGGTGGTGTGCTGCCTaGCCCTCTGCTTTGGTGCTT +
Preference number: 4 (lower is better)
Translates to: AGAASESRERGYWGEPEPGWCAA*PSALVL
Trigger: AAGCACCAAAGCAGAGGGGCAGGCAGCACACCACCC...CGGCTCTGGCTCTCCCCAATATCCTCGCTCCCGGGACTCACTGGCAGCCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR GCA 90 bp GGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGGGGCAGGAAGGTGTCGGTaGTGCTCAGGGCTGTCCGCC +
Preference number: 4 (lower is better)
Translates to: GFMGQHPLRHALYSPHLGAGRCR*CSGLSA
Trigger: GGCGGACAGCCCTGAGCAGCACCGACACCTTCCTGC...CCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR GCA 90 bp GGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGGGGACGGCAGCGTCCACTaGCCAGAGCGGCAGTGTCAG +
Preference number: 4 (lower is better)
Translates to: GFMGQHPLRHALYSPHLGDGSVH*PERQCQ
Trigger: CTGACACTGCCGCTCTGGGCAGTGGACGCTGCCGTC...CCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp GCCTGGAATGCGGGGAAGTCAGACTGTGGGCGAAAGGGGAGCCCGGATTCCGGCCAGGCTGAAGTCCTGTaGGCAGGGCGGGGAGGTACA +
Preference number: 4 (lower is better)
Translates to: AWNAGKSDCGRKGSPDSGQAEVL*AGRGGT
Trigger: TGTACCTCCCCGCCCTGCCCACAGGACTTCAGCCTG...GCCGGAATCCGGGCTCCCCTTTCGCCCACAGTCTGACTTCCCCGCATTCCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp GCCTGGAATGCGGGGAAGTCAGACTGTGGGCGAAAGGGGAGCCCGGATTCCGGCGAGCCAAAGACCCACTaGACGGCAGCGTCCACTGCC +
Preference number: 4 (lower is better)
Translates to: AWNAGKSDCGRKGSPDSGEPKTH*TAASTA
Trigger: GGCAGTGGACGCTGCCGTCCAGTGGGTCTTTGGCTC...GCCGGAATCCGGGCTCCCCTTTCGCCCACAGTCTGACTTCCCCGCATTCCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp GCTGGGGCTGCCAGTGAGTCCCGGGAGCGAGGATATTGGGGAGAGCCAGAGCCGTTGAGGCGCTCGTCGTaGTGGGCCGACAGGAAGATG +
Preference number: 4 (lower is better)
Translates to: AGAASESRERGYWGEPEPLRRSS*WADRKM
Trigger: CATCTTCCTGTCGGCCCACCACGACGAGCGCCTCAA...CGGCTCTGGCTCTCCCCAATATCCTCGCTCCCGGGACTCACTGGCAGCCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp GCCTGGAATGCGGGGAAGTCAGACTGTGGGCGAAAGGGGAGCCCGGATTCCGGCGACGATGGCTGCCTCTaGAGCCCTCTCTGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: AWNAGKSDCGRKGSPDSGDDGCL*SPLWLG
Trigger: CCCCAACCAGAGAGGGCTCCAGAGGCAGCCATCGTC...GCCGGAATCCGGGCTCCCCTTTCGCCCACAGTCTGACTTCCCCGCATTCCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR TCA 90 bp GGCTGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACGGTCGAAGTTCAGGCTaGAGTCCTGTGGGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: GCGFMGQHPLRHALYSPHGRSSG*SPVGRA
Trigger: CGCCCTGCCCACAGGACTTCAGCCTGAACTTCGACC...GTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR TCA 90 bp GGCTGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACGGTAGCGGTCAAAGCTaGTGCAGGCCAGCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: GCGFMGQHPLRHALYSPHGSGQS*CRPAGG
Trigger: CCCTCCTGCTGGCCTGCATCAGCTTTGACCGCTACC...GTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR TCA 90 bp GCCTGGAATGCGGGGAAGTCAGACTGTGGGCGAAAGGGGAGCCCGGATTCCGGCAAGCGCCCAGGTCCATaGGGATGTCCACCAGCACCA +
Preference number: 4 (lower is better)
Translates to: AWNAGKSDCGRKGSPDSGKRPGP*GCPPAP
Trigger: TGGTGCTGGTGGACATCCTCATGGACCTGGGCGCTT...GCCGGAATCCGGGCTCCCCTTTCGCCCACAGTCTGACTTCCCCGCATTCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR TCA 90 bp GGCTGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACAGCCCAGGCCTGAGGTaGCCGACTTGGCCACGTCTA +
Preference number: 4 (lower is better)
Translates to: GCGFMGQHPLRHALYSPHSPGLR*PTWPRL
Trigger: TAGACGTGGCCAAGTCGGTCACCTCAGGCCTGGGCT...GTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR TCA 90 bp GCCTGGAATGCGGGGAAGTCAGACTGTGGGCGAAAGGGGAGCCCGGATTCCGGCGGTCTCAGACCAGGATaGATCCCGGCGGGAAGACGA +
Preference number: 4 (lower is better)
Translates to: AWNAGKSDCGRKGSPDSGGLRPG*IPAGRR
Trigger: TCGTCTTCCCGCCGGGATTCATCCTGGTCTGAGACC...GCCGGAATCCGGGCTCCCCTTTCGCCCACAGTCTGACTTCCCCGCATTCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR GCA 90 bp GCCTGGAATGCGGGGAAGTCAGACTGTGGGCGAAAGGGGAGCCCGGATTCCGGCTGCTGGGTGGTGTGCTaGCTGCCCCTCTGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: AWNAGKSDCGRKGSPDSGCWVVC*LPLCFG
Trigger: ACCAAAGCAGAGGGGCAGGCAGCACACCACCCAGCA...GCCGGAATCCGGGCTCCCCTTTCGCCCACAGTCTGACTTCCCCGCATTCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR GCA 90 bp GCCTGGAATGCGGGGAAGTCAGACTGTGGGCGAAAGGGGAGCCCGGATTCCGGCTTTCTCGGCCACAGTTaGGGGCCAAAGCGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: AWNAGKSDCGRKGSPDSGFLGHS*GPKRPG
Trigger: ACCTGGGCGCTTTGGCCCGCAACTGTGGCCGAGAAA...GCCGGAATCCGGGCTCCCCTTTCGCCCACAGTCTGACTTCCCCGCATTCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR GCA 90 bp GGCTGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACCGGGAAGACGATGGCTaGCTCTGGAGCCCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: GCGFMGQHPLRHALYSPHREDDG*LWSPLW
Trigger: CCAGAGAGGGCTCCAGAGGCAGCCATCGTCTTCCCG...GTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp AGGGAGGGAGGAGCCTGGAATGCGGGGAAGTCAGACTGTGGGCGAAAGGGGAGCGAGGCTGTAGAGGGCTaGCAGGAAGGCCCGGTCGAA +
Preference number: 4 (lower is better)
Translates to: REGGAWNAGKSDCGRKGSEAVEG*QEGPVE
Trigger: TTCGACCGGGCCTTCCTGCCAGCCCTCTACAGCCTC...GCTCCCCTTTCGCCCACAGTCTGACTTCCCCGCATTCCAGGCTCCTCCCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp TGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGCTCTGGAGCCCTCTCTaGTTGGGGCAGCCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: CGFMGQHPLRHALYSPHLLWSPL*LGQPRR
Trigger: GCGCCTGGGCTGCCCCAACCAGAGAGGGCTCCAGAG...CAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp GGCTGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACGACGATGGCTGCCTCTaGAGCCCTCTCTGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: GCGFMGQHPLRHALYSPHDDGCL*SPLWLG
Trigger: CCCCAACCAGAGAGGGCTCCAGAGGCAGCCATCGTC...GTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp AGGGAGGGAGGAGCCTGGAATGCGGGGAAGTCAGACTGTGGGCGAAAGGGGAGCCGGGAGCGAGGATATTaGGGAGAGCCAGAGCCGGCA +
Preference number: 4 (lower is better)
Translates to: REGGAWNAGKSDCGRKGSRERGY*GEPEPA
Trigger: TGCCGGCTCTGGCTCTCCCCAATATCCTCGCTCCCG...GCTCCCCTTTCGCCCACAGTCTGACTTCCCCGCATTCCAGGCTCCTCCCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR TCA 90 bp GGCTGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTCGCATTCTTCTGCGTaGTCCCATCGGCCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: GCGFMGQHPLRHALYSPHSHSSA*SHRPRD
Trigger: GTCCCTGGGCCGATGGGATCACGCAGAAGAATGCGA...GTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373691.4
CDS-3UTR TCA 90 bp GCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGGGAAGATGAAGTTGGCAGTGGGTGGCGTTaGGGCGCTCGTCGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: AAPSTPCLVLPALGEDEVGSGWR*GARRGG
Trigger: CCCACCACGACGAGCGCCTCAACGCCACCCACTGCC...AACTTCATCTTCCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR TCA 90 bp GGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGGGAAGCGCCCAGGTCCATaGGGATGTCCACCAGCACCA +
Preference number: 4 (lower is better)
Translates to: GFMGQHPLRHALYSPHLGKRPGP*GCPPAP
Trigger: TGGTGCTGGTGGACATCCTCATGGACCTGGGCGCTT...CCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR GCA 90 bp GGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGGGGGGTGGTGTGCTGCCTaGCCCTCTGCTTTGGTGCTT +
Preference number: 4 (lower is better)
Translates to: GFMGQHPLRHALYSPHLGGWCAA*PSALVL
Trigger: AAGCACCAAAGCAGAGGGGCAGGCAGCACACCACCC...CCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR GCA 90 bp TGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGCCATGGCTGGGCTGGTaGTCTGGCTGCTGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: CGFMGQHPLRHALYSPHLPWLGW*SGCWVV
Trigger: CACCACCCAGCAGCCAGAGCACCAGCCCAGCCATGG...CAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR GCA 90 bp GCTGGGGCTGCCAGTGAGTCCCGGGAGCGAGGATATTGGGGAGAGCCAGAGCCGGTTGAAGAGGGCACCTaGCACTTTGCAGAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: AGAASESRERGYWGEPEPVEEGT*HFAEAR
Trigger: TCTGGCCTCTGCAAAGTGGCAGGTGCCCTCTTCAAC...CGGCTCTGGCTCTCCCCAATATCCTCGCTCCCGGGACTCACTGGCAGCCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR GCA 90 bp TGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGAAGCCAGCCACCAGCTaGAGCACCCGCAGAGCCGTG +
Preference number: 4 (lower is better)
Translates to: CGFMGQHPLRHALYSPHLKPATS*STRRAV
Trigger: CACGGCTCTGCGGGTGCTGCAGCTGGTGGCTGGCTT...CAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR GCA 90 bp GGCTGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTTCTCGGCCACAGTTaGGGGCCAAAGCGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: GCGFMGQHPLRHALYSPHFLGHS*GPKRPG
Trigger: ACCTGGGCGCTTTGGCCCGCAACTGTGGCCGAGAAA...GTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR GCA 90 bp GGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGGGGGGAGGAGCCTGGAATaGGGGGAAGTCAGACTGTGG +
Preference number: 4 (lower is better)
Translates to: GFMGQHPLRHALYSPHLGGRSLE*GEVRLW
Trigger: CCACAGTCTGACTTCCCCGCATTCCAGGCTCCTCCC...CCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp AGGGAGGGAGGAGCCTGGAATGCGGGGAAGTCAGACTGTGGGCGAAAGGGGAGCCTCAAGGACCATGGCTaGGCTGGTGCTCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: REGGAWNAGKSDCGRKGSLKDHG*AGALAA
Trigger: AGCAGCCAGAGCACCAGCCCAGCCATGGTCCTTGAG...GCTCCCCTTTCGCCCACAGTCTGACTTCCCCGCATTCCAGGCTCCTCCCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp GGCTGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACCTCAAGGACCATGGCTaGGCTGGTGCTCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GCGFMGQHPLRHALYSPHLKDHG*AGALAA
Trigger: AGCAGCCAGAGCACCAGCCCAGCCATGGTCCTTGAG...GTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp GGCTGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACAGGCGCTCGTCGTGGTaGGCCGACAGGAAGATGAAG +
Preference number: 4 (lower is better)
Translates to: GCGFMGQHPLRHALYSPHRRSSW*ADRKMK
Trigger: CTTCATCTTCCTGTCGGCCCACCACGACGAGCGCCT...GTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp GGCTGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGAGGCGCTCGTCGTaGTGGGCCGACAGGAAGATG +
Preference number: 4 (lower is better)
Translates to: GCGFMGQHPLRHALYSPHLRRSS*WADRKM
Trigger: CATCTTCCTGTCGGCCCACCACGACGAGCGCCTCAA...GTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp TGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGCCGGCGGGAAGACGATaGCTGCCTCTGGAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: CGFMGQHPLRHALYSPHLPAGRR*LPLEPS
Trigger: AGAGGGCTCCAGAGGCAGCCATCGTCTTCCCGCCGG...CAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp AGGGAGGGAGGAGCCTGGAATGCGGGGAAGTCAGACTGTGGGCGAAAGGGGAGCAGGGAGGGAGGAGCCTaGAATGCGGGGAAGTCAGAC +
Preference number: 4 (lower is better)
Translates to: REGGAWNAGKSDCGRKGSREGGA*NAGKSD
Trigger: GTCTGACTTCCCCGCATTCCAGGCTCCTCCCTCCCT...GCTCCCCTTTCGCCCACAGTCTGACTTCCCCGCATTCCAGGCTCCTCCCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp GGCTGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACAGGGAGGGAGGAGCCTaGAATGCGGGGAAGTCAGAC +
Preference number: 4 (lower is better)
Translates to: GCGFMGQHPLRHALYSPHREGGA*NAGKSD
Trigger: GTCTGACTTCCCCGCATTCCAGGCTCCTCCCTCCCT...GTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp GCCTGGAATGCGGGGAAGTCAGACTGTGGGCGAAAGGGGAGCCCGGATTCCGGCAGGTCTTGGGGACCATaGCCACAGTCACTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: AWNAGKSDCGRKGSPDSGRSWGP*PQSLLS
Trigger: GCTCAGCAGTGACTGTGGCCATGGTCCCCAAGACCT...GCCGGAATCCGGGCTCCCCTTTCGCCCACAGTCTGACTTCCCCGCATTCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR TCA 90 bp TGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGCATGTAGCCCAGGCCTaGGGTGACCGACTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: CGFMGQHPLRHALYSPHLHVAQA*GDRLGH
Trigger: GTGGCCAAGTCGGTCACCTCAGGCCTGGGCTACATG...CAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR TCA 90 bp GGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGGGCATAGAGCAGCGGGTTaGGGCAGCAGTGCATGTAGC +
Preference number: 4 (lower is better)
Translates to: GFMGQHPLRHALYSPHLGHRAAG*GSSACS
Trigger: GCTACATGCACTGCTGCCTCAACCCGCTGCTCTATG...CCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR GCA 90 bp GCCTGGAATGCGGGGAAGTCAGACTGTGGGCGAAAGGGGAGCCCGGATTCCGGCGTTGAAGAGGGCACCTaGCACTTTGCAGAGGCCAGA +
Preference number: 4 (lower is better)
Translates to: AWNAGKSDCGRKGSPDSGVEEGT*HFAEAR
Trigger: TCTGGCCTCTGCAAAGTGGCAGGTGCCCTCTTCAAC...GCCGGAATCCGGGCTCCCCTTTCGCCCACAGTCTGACTTCCCCGCATTCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR GCA 90 bp AGGGAGGGAGGAGCCTGGAATGCGGGGAAGTCAGACTGTGGGCGAAAGGGGAGCTGGCCACGTCTACCCTaGTTTCTCGGCCACAGTTGC +
Preference number: 4 (lower is better)
Translates to: REGGAWNAGKSDCGRKGSWPRLP*FLGHSC
Trigger: GCAACTGTGGCCGAGAAAGCAGGGTAGACGTGGCCA...GCTCCCCTTTCGCCCACAGTCTGACTTCCCCGCATTCCAGGCTCCTCCCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR GCA 90 bp AGGGAGGGAGGAGCCTGGAATGCGGGGAAGTCAGACTGTGGGCGAAAGGGGAGCGCACCCTCTACGCCATaGCTTGTACTCCCCGCACTT +
Preference number: 4 (lower is better)
Translates to: REGGAWNAGKSDCGRKGSAPSTP*LVLPAL
Trigger: AAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGC...GCTCCCCTTTCGCCCACAGTCTGACTTCCCCGCATTCCAGGCTCCTCCCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp TGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGCAGGCTGAAGTCCTGTaGGCAGGGCGGGGAGGTACA +
Preference number: 4 (lower is better)
Translates to: CGFMGQHPLRHALYSPHLQAEVL*AGRGGT
Trigger: TGTACCTCCCCGCCCTGCCCACAGGACTTCAGCCTG...CAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp TGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGAGGCTGTAGAGGGCTaGCAGGAAGGCCCGGTCGAA +
Preference number: 4 (lower is better)
Translates to: CGFMGQHPLRHALYSPHLEAVEG*QEGPVE
Trigger: TTCGACCGGGCCTTCCTGCCAGCCCTCTACAGCCTC...CAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp GCCTGGAATGCGGGGAAGTCAGACTGTGGGCGAAAGGGGAGCCCGGATTCCGGCTCTGCTACAGCTAGGTaGAGCAGGAAGGTGTCGGTG +
Preference number: 4 (lower is better)
Translates to: AWNAGKSDCGRKGSPDSGSATAR*SRKVSV
Trigger: CACCGACACCTTCCTGCTCCACCTAGCTGTAGCAGA...GCCGGAATCCGGGCTCCCCTTTCGCCCACAGTCTGACTTCCCCGCATTCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp GCCTGGAATGCGGGGAAGTCAGACTGTGGGCGAAAGGGGAGCCCGGATTCCGGCAAGTTGTATTGGCAGTaGGTGGCGTTGAGGCGCTCG +
Preference number: 4 (lower is better)
Translates to: AWNAGKSDCGRKGSPDSGKLYWQ*VALRRS
Trigger: CGAGCGCCTCAACGCCACCCACTGCCAATACAACTT...GCCGGAATCCGGGCTCCCCTTTCGCCCACAGTCTGACTTCCCCGCATTCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR TCA 90 bp GCTGGGGCTGCCAGTGAGTCCCGGGAGCGAGGATATTGGGGAGAGCCAGAGCCGGTTTTAGTTTCCAAATaGGAAGGGCAGTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: AGAASESRERGYWGEPEPVLVSK*EGQWGS
Trigger: GGAGCCCCACTGCCCTTCTCATTTGGAAACTAAAAC...CGGCTCTGGCTCTCCCCAATATCCTCGCTCCCGGGACTCACTGGCAGCCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR GCA 90 bp TGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGTGCTGGGTGGTGTGCTaGCTGCCCCTCTGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: CGFMGQHPLRHALYSPHLCWVVC*LPLCFG
Trigger: ACCAAAGCAGAGGGGCAGGCAGCACACCACCCAGCA...CAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR GCA 90 bp GCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGGGAAGATGAAGTTGGCTGGTGCTCTGGCTaGTGGGTGGTGTGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: AAPSTPCLVLPALGEDEVGWCSG*WVVCCL
Trigger: CAGGCAGCACACCACCCAGCAGCCAGAGCACCAGCC...AACTTCATCTTCCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR GCA 90 bp GGCTGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTCTCTCGCATTCTTCTaGGTGATCCCATCGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GCGFMGQHPLRHALYSPHSLAFF*VIPSAQ
Trigger: CTGGGCCGATGGGATCACGCAGAAGAATGCGAGAGA...GTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373691.4
CDS-3UTR GCA 90 bp GCTGGGGCTGCCAGTGAGTCCCGGGAGCGAGGATATTGGGGAGAGCCAGAGCCGCAGCAGGAGGGCTCCTaGGTAGAAGTTGATGTTGAA +
Preference number: 4 (lower is better)
Translates to: AGAASESRERGYWGEPEPQQEGS*VEVDVE
Trigger: TTCAACATCAACTTCTACGCAGGAGCCCTCCTGCTG...CGGCTCTGGCTCTCCCCAATATCCTCGCTCCCGGGACTCACTGGCAGCCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR GCA 90 bp AGGGAGGGAGGAGCCTGGAATGCGGGGAAGTCAGACTGTGGGCGAAAGGGGAGCAAGGAGCAGCAATGGTaGAGTCCTCAGAGCTGGGAG +
Preference number: 4 (lower is better)
Translates to: REGGAWNAGKSDCGRKGSKEQQW*SPQSWE
Trigger: CTCCCAGCTCTGAGGACTGCACCATTGCTGCTCCTT...GCTCCCCTTTCGCCCACAGTCTGACTTCCCCGCATTCCAGGCTCCTCCCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp GCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGGGAAGATGAAGTTGGACCATGGCTGGGCTaGTGCTCTGGCTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: AAPSTPCLVLPALGEDEVGPWLG*CSGCWV
Trigger: CACCCAGCAGCCAGAGCACCAGCCCAGCCATGGTCC...AACTTCATCTTCCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp GGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGGGGCTCAGCCTGGGCTCTaGGATAGTGACTTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: GFMGQHPLRHALYSPHLGAQPGL*DSDFPS
Trigger: AGAAGGGAAGTCACTATCCCAGAGCCCAGGCTGAGC...CCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373691.4
CDS-3UTR CCA 90 bp AGGGAGGGAGGAGCCTGGAATGCGGGGAAGTCAGACTGTGGGCGAAAGGGGAGCTCTGCTACAGCTAGGTaGAGCAGGAAGGTGTCGGTG +
Preference number: 4 (lower is better)
Translates to: REGGAWNAGKSDCGRKGSSATAR*SRKVSV
Trigger: CACCGACACCTTCCTGCTCCACCTAGCTGTAGCAGA...GCTCCCCTTTCGCCCACAGTCTGACTTCCCCGCATTCCAGGCTCCTCCCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp AGGGAGGGAGGAGCCTGGAATGCGGGGAAGTCAGACTGTGGGCGAAAGGGGAGCAAGTTGTATTGGCAGTaGGTGGCGTTGAGGCGCTCG +
Preference number: 4 (lower is better)
Translates to: REGGAWNAGKSDCGRKGSKLYWQ*VALRRS
Trigger: CGAGCGCCTCAACGCCACCCACTGCCAATACAACTT...GCTCCCCTTTCGCCCACAGTCTGACTTCCCCGCATTCCAGGCTCCTCCCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp GCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGGGAAGATGAAGTTGGAGCCCTCTCTGGTTaGGGCAGCCCAGGCGCAAGA +
Preference number: 4 (lower is better)
Translates to: AAPSTPCLVLPALGEDEVGALSG*GSPGAR
Trigger: TCTTGCGCCTGGGCTGCCCCAACCAGAGAGGGCTCC...AACTTCATCTTCCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR TCA 90 bp GCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGGGAAGATGAAGTTGGTCGAAGTTCAGGCTaGAGTCCTGTGGGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: AAPSTPCLVLPALGEDEVGRSSG*SPVGRA
Trigger: CGCCCTGCCCACAGGACTTCAGCCTGAACTTCGACC...AACTTCATCTTCCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR TCA 90 bp GCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGGGAAGATGAAGTTGGTAGCGGTCAAAGCTaGTGCAGGCCAGCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: AAPSTPCLVLPALGEDEVGSGQS*CRPAGG
Trigger: CCCTCCTGCTGGCCTGCATCAGCTTTGACCGCTACC...AACTTCATCTTCCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR TCA 90 bp GCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGGGAAGATGAAGTTCATGTAGCCCAGGCCTaGGGTGACCGACTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: AAPSTPCLVLPALGEDEVHVAQA*GDRLGH
Trigger: GTGGCCAAGTCGGTCACCTCAGGCCTGGGCTACATG...AACTTCATCTTCCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR GCA 90 bp GCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGGGAAGATGAAGTTCGGGAAGACGATGGCTaGCTCTGGAGCCCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: AAPSTPCLVLPALGEDEVREDDG*LWSPLW
Trigger: CCAGAGAGGGCTCCAGAGGCAGCCATCGTCTTCCCG...AACTTCATCTTCCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR GCA 90 bp TGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGCACCCTCTACGCCATaGCTTGTACTCCCCGCACTT +
Preference number: 4 (lower is better)
Translates to: CGFMGQHPLRHALYSPHLAPSTP*LVLPAL
Trigger: AAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGC...CAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp GCCTGGAATGCGGGGAAGTCAGACTGTGGGCGAAAGGGGAGCCCGGATTCCGGCTCATTTAGCACTTGGTaGTCACTCACCTGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: AWNAGKSDCGRKGSPDSGSFSTW*SLTCEG
Trigger: GCCCTCACAGGTGAGTGACCACCAAGTGCTAAATGA...GCCGGAATCCGGGCTCCCCTTTCGCCCACAGTCTGACTTCCCCGCATTCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373691.4
CDS-3UTR CCA 90 bp GCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGGGAAGATGAAGTTGAGCCAAAGACCCACTaGACGGCAGCGTCCACTGCC +
Preference number: 4 (lower is better)
Translates to: AAPSTPCLVLPALGEDEVEPKTH*TAASTA
Trigger: GGCAGTGGACGCTGCCGTCCAGTGGGTCTTTGGCTC...AACTTCATCTTCCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp GGCTGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACGGCGGTAGAGCTGGGTaGCATGAACTATGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: GCGFMGQHPLRHALYSPHGGRAG*HELCSG
Trigger: ACCTGAACATAGTTCATGCCACCCAGCTCTACCGCC...GTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp GGCTGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTGTGGGAAGTTGTATTaGCAGTGGGTGGCGTTGAGG +
Preference number: 4 (lower is better)
Translates to: GCGFMGQHPLRHALYSPHCGKLY*QWVALR
Trigger: CCTCAACGCCACCCACTGCCAATACAACTTCCCACA...GTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR TCA 90 bp TGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGTCCGCTCCCGGAACTTaGCCCCTACAAAGGCATAGA +
Preference number: 4 (lower is better)
Translates to: CGFMGQHPLRHALYSPHLSAPGT*PLQRHR
Trigger: TCTATGCCTTTGTAGGGGTCAAGTTCCGGGAGCGGA...CAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR GCA 90 bp AGGGAGGGAGGAGCCTGGAATGCGGGGAAGTCAGACTGTGGGCGAAAGGGGAGCCAGCAGGAGGGCTCCTaGGTAGAAGTTGATGTTGAA +
Preference number: 4 (lower is better)
Translates to: REGGAWNAGKSDCGRKGSQQEGS*VEVDVE
Trigger: TTCAACATCAACTTCTACGCAGGAGCCCTCCTGCTG...GCTCCCCTTTCGCCCACAGTCTGACTTCCCCGCATTCCAGGCTCCTCCCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp GCCTGGAATGCGGGGAAGTCAGACTGTGGGCGAAAGGGGAGCCCGGATTCCGGCGGCTGTGTAAAGGCCTaGCAGGAACTCTTTTGTGAT +
Preference number: 4 (lower is better)
Translates to: AWNAGKSDCGRKGSPDSGGCVKA*QELFCD
Trigger: ATCACAAAAGAGTTCCTGCCAGGCCTTTACACAGCC...GCCGGAATCCGGGCTCCCCTTTCGCCCACAGTCTGACTTCCCCGCATTCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373691.4
CDS-3UTR CCA 90 bp GCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGGGAAGATGAAGTTAGGCGCTCGTCGTGGTaGGCCGACAGGAAGATGAAG +
Preference number: 4 (lower is better)
Translates to: AAPSTPCLVLPALGEDEVRRSSW*ADRKMK
Trigger: CTTCATCTTCCTGTCGGCCCACCACGACGAGCGCCT...AACTTCATCTTCCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp GGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGGGGCGTCATTTAGCACTTaGTGGTCACTCACCTCAAGG +
Preference number: 4 (lower is better)
Translates to: GFMGQHPLRHALYSPHLGASFST*WSLTSR
Trigger: CCTTGAGGTGAGTGACCACCAAGTGCTAAATGACGC...CCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373693.4
CDS-3UTR GCA 90 bp AGGGAGGGAGGAGCCTGGAATGCGGGGAAGTCAGACTGTGGGCGAAAGGGGAGCTCCCTTCTCAAAGGCTaGTTCTCTCGCATTCTTCTG +
Preference number: 4 (lower is better)
Translates to: REGGAWNAGKSDCGRKGSSLLKG*FSRILL
Trigger: CAGAAGAATGCGAGAGAAGCAGCCTTTGAGAAGGGA...GCTCCCCTTTCGCCCACAGTCTGACTTCCCCGCATTCCAGGCTCCTCCCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373691.4
CDS-3UTR CCA 90 bp TGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGCAGGAAGATGAAGTCTaGGAGGGCGAAAAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: CGFMGQHPLRHALYSPHLQEDEV*EGEKQA
Trigger: TGCCTGCTTTTCGCCCTCCCAGACTTCATCTTCCTG...CAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR TCA 90 bp GGCTGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACGTCTGTGATTTACTCTaGGCAGCTCCTCCTATAACT +
Preference number: 4 (lower is better)
Translates to: GCGFMGQHPLRHALYSPHVCDLL*AAPPIT
Trigger: AGTTATAGGAGGAGCTGCTCAGAGTAAATCACAGAC...GTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373691.4
CDS-3UTR TCA 90 bp GCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGGGAAGATGAAGTTTCCGCTCCCGGAACTTaGCCCCTACAAAGGCATAGA +
Preference number: 4 (lower is better)
Translates to: AAPSTPCLVLPALGEDEVSAPGT*PLQRHR
Trigger: TCTATGCCTTTGTAGGGGTCAAGTTCCGGGAGCGGA...AACTTCATCTTCCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR TCA 90 bp GCCTGGAATGCGGGGAAGTCAGACTGTGGGCGAAAGGGGAGCCCGGATTCCGGCCGCACTTGGGGAAGATaGAGTTTTAGTTTCCAAATG +
Preference number: 4 (lower is better)
Translates to: AWNAGKSDCGRKGSPDSGRTWGR*SFSFQM
Trigger: CATTTGGAAACTAAAACTTCATCTTCCCCAAGTGCG...GCCGGAATCCGGGCTCCCCTTTCGCCCACAGTCTGACTTCCCCGCATTCCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp TGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGCGTCATTTAGCACTTaGTGGTCACTCACCTGTGAG +
Preference number: 4 (lower is better)
Translates to: CGFMGQHPLRHALYSPHLASFST*WSLTCE
Trigger: CTCACAGGTGAGTGACCACCAAGTGCTAAATGACGC...CAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373691.4
CDS-3UTR CCA 90 bp GCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGGGAAGATGAAGTTGCTAAGGAGCAGCAATaGTGCAGTCCTCAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: AAPSTPCLVLPALGEDEVAKEQQ*CSPQSW
Trigger: CCAGCTCTGAGGACTGCACCATTGCTGCTCCTTAGC...AACTTCATCTTCCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR TCA 90 bp GGCTGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACCGCACTTGGGGAAGATaGAGTTTTAGTTTCCAAATG +
Preference number: 4 (lower is better)
Translates to: GCGFMGQHPLRHALYSPHRTWGR*SFSFQM
Trigger: CATTTGGAAACTAAAACTTCATCTTCCCCAAGTGCG...GTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp GCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGGGAAGATGAAGTTGGCGGTAGAGCTGGGTaGCATGAACTATGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: AAPSTPCLVLPALGEDEVGGRAG*HELCSG
Trigger: ACCTGAACATAGTTCATGCCACCCAGCTCTACCGCC...AACTTCATCTTCCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp GCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGGGAAGATGAAGTTCAGGAAGATGAAGTCTaGGAGGGCGAAAAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: AAPSTPCLVLPALGEDEVQEDEV*EGEKQA
Trigger: TGCCTGCTTTTCGCCCTCCCAGACTTCATCTTCCTG...AACTTCATCTTCCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp GCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGGGAAGATGAAGTTTGTGGGAAGTTGTATTaGCAGTGGGTGGCGTTGAGG +
Preference number: 4 (lower is better)
Translates to: AAPSTPCLVLPALGEDEVCGKLY*QWVALR
Trigger: CCTCAACGCCACCCACTGCCAATACAACTTCCCACA...AACTTCATCTTCCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR TCA 90 bp GCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGGGAAGATGAAGTTGTTTTAGTTTCCAAATaGGAAGGGCAGTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: AAPSTPCLVLPALGEDEVVLVSK*EGQWGS
Trigger: GGAGCCCCACTGCCCTTCTCATTTGGAAACTAAAAC...AACTTCATCTTCCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CCA 90 bp GCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGGGAAGATGAAGTTTCATTTAGCACTTGGTaGTCACTCACCTCAAGGACC +
Preference number: 4 (lower is better)
Translates to: AAPSTPCLVLPALGEDEVSFSTW*SLTSRT
Trigger: GGTCCTTGAGGTGAGTGACCACCAAGTGCTAAATGA...AACTTCATCTTCCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373693.4
CDS CCA 90 bp TCCAGCAGAGGGCAAAGGCCACCACGACCACCACCACCAGCCGCATaGCCCGCAGGCGCCGCTGGCCCCTGGAAACCAGCAGCACGGCCA +
Preference number: 5 (lower is better)
Translates to: SSRGQRPPRPPPPAA*PAGAAGPWKPAARP
Trigger: TGGCCGTGCTGCTGGTTTCCAGGGGCCAGCGGCGCCTGCGGGCCATGCGGCTGGTGGTGGTGGTCGTGGTGGCCTTTGCCCTCTGCTGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS CCA 90 bp CGACCACCACCACCAGCCGCATGGCCCGCAGGCGCCGCTGGCCCCTaGAAACCAGCAGCACGGCCAGGATGTGGGCATAGCAGTAGGCCA +
Preference number: 5 (lower is better)
Translates to: RPPPPAAWPAGAAGP*KPAARPGCGHSSRP
Trigger: TGGCCTACTGCTATGCCCACATCCTGGCCGTGCTGCTGGTTTCCAGGGGCCAGCGGCGCCTGCGGGCCATGCGGCTGGTGGTGGTGGTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS GCA 90 bp GCAGCGTGTCTGCTACAGCTAGGTGGAGCAGGAAGGTGTCGGTGCTaGTCAGGGCTGTCCGCCGGCTCAGCAGCACGGCTGCCACCGCGC +
Preference number: 5 (lower is better)
Translates to: AACLLQLGGAGRCRC*SGLSAGSAARLPPR
Trigger: GCGCGGTGGCAGCCGTGCTGCTGAGCCGGCGGACAGCCCTGAGCAGCACCGACACCTTCCTGCTCCACCTAGCTGTAGCAGACACGCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CAA 90 bp GCTGGGGCTGCCAGTGAGTCCCGGGAGCGAGGATATTGGGGAGAGCCAGAGCCGTGGAGCCCTCTCTGGTaGGGGCAGCCCAGGCGCAAG +
Preference number: 5 (lower is better)
Translates to: AGAASESRERGYWGEPEPWSPLW*GQPRRK
Trigger: CTTGCGCCTGGGCTGCCCCAACCAGAGAGGGCTCCA...CGGCTCTGGCTCTCCCCAATATCCTCGCTCCCGGGACTCACTGGCAGCCCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS GCA 90 bp CCAGCAGCGTGTCTGCTACAGCTAGGTGGAGCAGGAAGGTGTCGGTaGTGCTCAGGGCTGTCCGCCGGCTCAGCAGCACGGCTGCCACCG +
Preference number: 5 (lower is better)
Translates to: PAACLLQLGGAGRCR*CSGLSAGSAARLPP
Trigger: CGGTGGCAGCCGTGCTGCTGAGCCGGCGGACAGCCCTGAGCAGCACCGACACCTTCCTGCTCCACCTAGCTGTAGCAGACACGCTGCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS CCA 90 bp TGCAGCACCCGCAGAGCCGTGCGGCCCACCTGTGGGAAGTTGTATTaGCAGTGGGTGGCGTTGAGGCGCTCGTCGTGGTGGGCCGACAGG +
Preference number: 5 (lower is better)
Translates to: CSTRRAVRPTCGKLY*QWVALRRSSWWADR
Trigger: CCTGTCGGCCCACCACGACGAGCGCCTCAACGCCACCCACTGCCAATACAACTTCCCACAGGTGGGCCGCACGGCTCTGCGGGTGCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CAA 90 bp GCTGGGGCTGCCAGTGAGTCCCGGGAGCGAGGATATTGGGGAGAGCCAGAGCCGCTTTCTCGGCCACAGTaGCGGGCCAAAGCGCCCAGG +
Preference number: 5 (lower is better)
Translates to: AGAASESRERGYWGEPEPLSRPQ*RAKAPR
Trigger: CCTGGGCGCTTTGGCCCGCAACTGTGGCCGAGAAAG...CGGCTCTGGCTCTCCCCAATATCCTCGCTCCCGGGACTCACTGGCAGCCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS CCA 90 bp AATCCCGGCGGGAAGACGATGGCTGCCTCTGGAGCCCTCTCTGGTTaGGGCAGCCCAGGCGCAAGAGCAGCATCCACATCCGCTCCCGGA +
Preference number: 5 (lower is better)
Translates to: NPGGKTMAASGALSG*GSPGARAASTSAPG
Trigger: TCCGGGAGCGGATGTGGATGCTGCTCTTGCGCCTGGGCTGCCCCAACCAGAGAGGGCTCCAGAGGCAGCCATCGTCTTCCCGCCGGGATT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CAA 90 bp AGGGAGGGAGGAGCCTGGAATGCGGGGAAGTCAGACTGTGGGCGAAAGGGGAGCTGGCAGTGGGTGGCGTaGAGGCGCTCGTCGTGGTGG +
Preference number: 5 (lower is better)
Translates to: REGGAWNAGKSDCGRKGSWQWVA*RRSSWW
Trigger: CCACCACGACGAGCGCCTCAACGCCACCCACTGCCA...GCTCCCCTTTCGCCCACAGTCTGACTTCCCCGCATTCCAGGCTCCTCCCTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CAA 90 bp GGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGGGCCGGGAGCGAGGATATaGGGGAGAGCCAGAGCCGGC +
Preference number: 5 (lower is better)
Translates to: GFMGQHPLRHALYSPHLGPGARI*GRARAG
Trigger: GCCGGCTCTGGCTCTCCCCAATATCCTCGCTCCCGG...CCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS CCA 90 bp GGCGTTGAGGCGCTCGTCGTGGTGGGCCGACAGGAAGATGAAGTCTaGGAGGGCGAAAAGCAGGCAGAGCCCCCAGACAGCCAGGCAGGT +
Preference number: 5 (lower is better)
Translates to: GVEALVVVGRQEDEV*EGEKQAEPPDSQAG
Trigger: ACCTGCCTGGCTGTCTGGGGGCTCTGCCTGCTTTTCGCCCTCCCAGACTTCATCTTCCTGTCGGCCCACCACGACGAGCGCCTCAACGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS CCA 90 bp ACCCGCAGAGCCGTGCGGCCCACCTGTGGGAAGTTGTATTGGCAGTaGGTGGCGTTGAGGCGCTCGTCGTGGTGGGCCGACAGGAAGATG +
Preference number: 5 (lower is better)
Translates to: TRRAVRPTCGKLYWQ*VALRRSSWWADRKM
Trigger: CATCTTCCTGTCGGCCCACCACGACGAGCGCCTCAACGCCACCCACTGCCAATACAACTTCCCACAGGTGGGCCGCACGGCTCTGCGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS CCA 90 bp GATGAATCCCGGCGGGAAGACGATGGCTGCCTCTGGAGCCCTCTCTaGTTGGGGCAGCCCAGGCGCAAGAGCAGCATCCACATCCGCTCC +
Preference number: 5 (lower is better)
Translates to: DESRREDDGCLWSPL*LGQPRRKSSIHIRS
Trigger: GGAGCGGATGTGGATGCTGCTCTTGCGCCTGGGCTGCCCCAACCAGAGAGGGCTCCAGAGGCAGCCATCGTCTTCCCGCCGGGATTCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CAA 90 bp GCTGGGGCTGCCAGTGAGTCCCGGGAGCGAGGATATTGGGGAGAGCCAGAGCCGCCCACCTGTGGGAAGTaGTATTGGCAGTGGGTGGCG +
Preference number: 5 (lower is better)
Translates to: AGAASESRERGYWGEPEPPTCGK*YWQWVA
Trigger: CGCCACCCACTGCCAATACAACTTCCCACAGGTGGG...CGGCTCTGGCTCTCCCCAATATCCTCGCTCCCGGGACTCACTGGCAGCCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CAA 90 bp GCCTGGAATGCGGGGAAGTCAGACTGTGGGCGAAAGGGGAGCCCGGATTCCGGCCCTCTACGCCATGCCTaGTACTCCCCGCACTTGGGG +
Preference number: 5 (lower is better)
Translates to: AWNAGKSDCGRKGSPDSGPLRHA*YSPHLG
Trigger: CCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGG...GCCGGAATCCGGGCTCCCCTTTCGCCCACAGTCTGACTTCCCCGCATTCCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS TCA 90 bp GGAGGCTGTAGAGGGCTGGCAGGAAGGCCCGGTCGAAGTTCAGGCTaGAGTCCTGTGGGCAGGGCGGGGAGGTACAGCACGAGTCACTCT +
Preference number: 5 (lower is better)
Translates to: GGCRGLAGRPGRSSG*SPVGRAGRYSTSHS
Trigger: AGAGTGACTCGTGCTGTACCTCCCCGCCCTGCCCACAGGACTTCAGCCTGAACTTCGACCGGGCCTTCCTGCCAGCCCTCTACAGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS GCA 90 bp TCTGAGGTCTCAGACCAGGATGAATCCCGGCGGGAAGACGATGGCTaGCTCTGGAGCCCTCTCTGGTTGGGGCAGCCCAGGCGCAAGAGC +
Preference number: 5 (lower is better)
Translates to: SEVSDQDESRREDDG*LWSPLWLGQPRRKS
Trigger: GCTCTTGCGCCTGGGCTGCCCCAACCAGAGAGGGCTCCAGAGGCAGCCATCGTCTTCCCGCCGGGATTCATCCTGGTCTGAGACCTCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS CCA 90 bp AAGAGGGCACCTGCCACTTTGCAGAGGCCAGAGCCAAAGACCCACTaGACGGCAGCGTCCACTGCCCAGAGCGGCAGTGTCAGCACCAGC +
Preference number: 5 (lower is better)
Translates to: KRAPATLQRPEPKTH*TAASTAQSGSVSTS
Trigger: GCTGGTGCTGACACTGCCGCTCTGGGCAGTGGACGCTGCCGTCCAGTGGGTCTTTGGCTCTGGCCTCTGCAAAGTGGCAGGTGCCCTCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CAA 90 bp GCCTGGAATGCGGGGAAGTCAGACTGTGGGCGAAAGGGGAGCCCGGATTCCGGCAGGGCACCTGCCACTTaGCAGAGGCCAGAGCCAAAG +
Preference number: 5 (lower is better)
Translates to: AWNAGKSDCGRKGSPDSGRAPAT*QRPEPK
Trigger: CTTTGGCTCTGGCCTCTGCAAAGTGGCAGGTGCCCT...GCCGGAATCCGGGCTCCCCTTTCGCCCACAGTCTGACTTCCCCGCATTCCAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CAA 90 bp TGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGCCGGGAGCGAGGATATaGGGGAGAGCCAGAGCCGGC +
Preference number: 5 (lower is better)
Translates to: CGFMGQHPLRHALYSPHLPGARI*GRARAG
Trigger: GCCGGCTCTGGCTCTCCCCAATATCCTCGCTCCCGG...CAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CAA 90 bp GGCTGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACGCGGCAGGATGGGGCTaGGCAGCTAAGGAGCAGCAA +
Preference number: 5 (lower is better)
Translates to: GCGFMGQHPLRHALYSPHAAGWG*AAKEQQ
Trigger: TTGCTGCTCCTTAGCTGCCAAGCCCCATCCTGCCGC...GTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CAA 90 bp AGGGAGGGAGGAGCCTGGAATGCGGGGAAGTCAGACTGTGGGCGAAAGGGGAGCCCTCTACGCCATGCCTaGTACTCCCCGCACTTGGGG +
Preference number: 5 (lower is better)
Translates to: REGGAWNAGKSDCGRKGSPLRHA*YSPHLG
Trigger: CCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGG...GCTCCCCTTTCGCCCACAGTCTGACTTCCCCGCATTCCAGGCTCCTCCCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS CCA 90 bp GAGGGCTGGCAGGAAGGCCCGGTCGAAGTTCAGGCTGAAGTCCTGTaGGCAGGGCGGGGAGGTACAGCACGAGTCACTCTCGTTTTCTCC +
Preference number: 5 (lower is better)
Translates to: EGWQEGPVEVQAEVL*AGRGGTARVTLVFS
Trigger: GGAGAAAACGAGAGTGACTCGTGCTGTACCTCCCCGCCCTGCCCACAGGACTTCAGCCTGAACTTCGACCGGGCCTTCCTGCCAGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CAA 90 bp GGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGGGAGGGCACCTGCCACTTaGCAGAGGCCAGAGCCAAAG +
Preference number: 5 (lower is better)
Translates to: GFMGQHPLRHALYSPHLGRAPAT*QRPEPK
Trigger: CTTTGGCTCTGGCCTCTGCAAAGTGGCAGGTGCCCT...CCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CAA 90 bp AGGGAGGGAGGAGCCTGGAATGCGGGGAAGTCAGACTGTGGGCGAAAGGGGAGCCCCACCTGTGGGAAGTaGTATTGGCAGTGGGTGGCG +
Preference number: 5 (lower is better)
Translates to: REGGAWNAGKSDCGRKGSPTCGK*YWQWVA
Trigger: CGCCACCCACTGCCAATACAACTTCCCACAGGTGGG...GCTCCCCTTTCGCCCACAGTCTGACTTCCCCGCATTCCAGGCTCCTCCCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CAA 90 bp GGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGGGCCTGAGGTGACCGACTaGGCCACGTCTACCCTGCTT +
Preference number: 5 (lower is better)
Translates to: GFMGQHPLRHALYSPHLGPEVTD*ATSTLL
Trigger: AAGCAGGGTAGACGTGGCCAAGTCGGTCACCTCAGG...CCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS CCA 90 bp AAGTTCTCCAGGAGGGCGGCAACCTCGGCGTCATTTAGCACTTGGTaGTCACTCACCTGTGAGGGCGGGAACGGGGAGGAAGGGGCTGTG +
Preference number: 5 (lower is better)
Translates to: KFSRRAATSASFSTW*SLTCEGGNGEEGAV
Trigger: CACAGCCCCTTCCTCCCCGTTCCCGCCCTCACAGGTGAGTGACCACCAAGTGCTAAATGACGCCGAGGTTGCCGCCCTCCTGGAGAACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373691.4
CDS CCA 90 bp CTGAAGTTCTCCAGGAGGGCGGCAACCTCGGCGTCATTTAGCACTTaGTGGTCACTCACCTGTGAGGGCGGGAACGGGGAGGAAGGGGCT +
Preference number: 5 (lower is better)
Translates to: LKFSRRAATSASFST*WSLTCEGGNGEEGA
Trigger: AGCCCCTTCCTCCCCGTTCCCGCCCTCACAGGTGAGTGACCACCAAGTGCTAAATGACGCCGAGGTTGCCGCCCTCCTGGAGAACTTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373691.4
CDS-3UTR CAA 90 bp GCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGGGAAGATGAAGTTTGGCAGTGGGTGGCGTaGAGGCGCTCGTCGTGGTGG +
Preference number: 5 (lower is better)
Translates to: AAPSTPCLVLPALGEDEVWQWVA*RRSSWW
Trigger: CCACCACGACGAGCGCCTCAACGCCACCCACTGCCA...AACTTCATCTTCCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CAA 90 bp GCCTGGAATGCGGGGAAGTCAGACTGTGGGCGAAAGGGGAGCCCGGATTCCGGCCTGTGGGAAGTTGTATaGGCAGTGGGTGGCGTTGAG +
Preference number: 5 (lower is better)
Translates to: AWNAGKSDCGRKGSPDSGLWEVV*AVGGVE
Trigger: CTCAACGCCACCCACTGCCAATACAACTTCCCACAG...GCCGGAATCCGGGCTCCCCTTTCGCCCACAGTCTGACTTCCCCGCATTCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CAA 90 bp GCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGGGAAGATGAAGTTTGGAGCCCTCTCTGGTaGGGGCAGCCCAGGCGCAAG +
Preference number: 5 (lower is better)
Translates to: AAPSTPCLVLPALGEDEVWSPLW*GQPRRK
Trigger: CTTGCGCCTGGGCTGCCCCAACCAGAGAGGGCTCCA...AACTTCATCTTCCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CAA 90 bp GCTGGGGCTGCCAGTGAGTCCCGGGAGCGAGGATATTGGGGAGAGCCAGAGCCGGCAAATATAGAGGTCTaGGGGACCATGGCCACAGTC +
Preference number: 5 (lower is better)
Translates to: AGAASESRERGYWGEPEPANIEV*GTMATV
Trigger: GACTGTGGCCATGGTCCCCAAGACCTCTATATTTGC...CGGCTCTGGCTCTCCCCAATATCCTCGCTCCCGGGACTCACTGGCAGCCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS CCA 90 bp GGGAAGTTGTATTGGCAGTGGGTGGCGTTGAGGCGCTCGTCGTGGTaGGCCGACAGGAAGATGAAGTCTGGGAGGGCGAAAAGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: GKLYWQWVALRRSSW*ADRKMKSGRAKSRQ
Trigger: CTGCCTGCTTTTCGCCCTCCCAGACTTCATCTTCCTGTCGGCCCACCACGACGAGCGCCTCAACGCCACCCACTGCCAATACAACTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS-3UTR CAA 90 bp GCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGGGAAGATGAAGTTCTTTCTCGGCCACAGTaGCGGGCCAAAGCGCCCAGG +
Preference number: 5 (lower is better)
Translates to: AAPSTPCLVLPALGEDEVLSRPQ*RAKAPR
Trigger: CCTGGGCGCTTTGGCCCGCAACTGTGGCCGAGAAAG...AACTTCATCTTCCCCAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS GCA 90 bp CCGCTCAGCCTGGGCTCTGGGATAGTGACTTCCCTTCTCAAAGGCTaGTTCTCTCGCATTCTTCTGCGTGATCCCATCGGCCCAGGGACC +
Preference number: 5 (lower is better)
Translates to: PLSLGSGIVTSLLKG*FSRILLRDPIGPGT
Trigger: GGTCCCTGGGCCGATGGGATCACGCAGAAGAATGCGAGAGAAGCAGCCTTTGAGAAGGGAAGTCACTATCCCAGAGCCCAGGCTGAGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373691.4
CDS CCA 90 bp TGTGGGAAGTTGTATTGGCAGTGGGTGGCGTTGAGGCGCTCGTCGTaGTGGGCCGACAGGAAGATGAAGTCTGGGAGGGCGAAAAGCAGG +
Preference number: 5 (lower is better)
Translates to: CGKLYWQWVALRRSS*WADRKMKSGRAKSR
Trigger: CCTGCTTTTCGCCCTCCCAGACTTCATCTTCCTGTCGGCCCACCACGACGAGCGCCTCAACGCCACCCACTGCCAATACAACTTCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS TCA 90 bp AGTGACTTCCCTTCTCAAAGGCTGCTTCTCTCGCATTCTTCTGCGTaGTCCCATCGGCCCAGGGACCCCTCAAGGACCATGGCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: SDFPSQRLLLSHSSA*SHRPRDPSRTMAGL
Trigger: CAGCCCAGCCATGGTCCTTGAGGGGTCCCTGGGCCGATGGGATCACGCAGAAGAATGCGAGAGAAGCAGCCTTTGAGAAGGGAAGTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373691.4
CDS-3UTR CAA 90 bp TGTGGCTTCATGGGGCAGCACCCTCTACGCCATGCCTTGTACTCCCCGCACTTGGCAAATATAGAGGTCTaGGGGACCATGGCCACAGTC +
Preference number: 5 (lower is better)
Translates to: CGFMGQHPLRHALYSPHLANIEV*GTMATV
Trigger: GACTGTGGCCATGGTCCCCAAGACCTCTATATTTGC...CAAGTGCGGGGAGTACAAGGCATGGCGTAGAGGGTGCTGCCCCATGAAGCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS CCA 90 bp TTCCAGGGCCGTACTTCCTCAACTCCATCCGCTCAGCCTGGGCTCTaGGATAGTGACTTCCCTTCTCAAAGGCTGCTTCTCTCGCATTCT +
Preference number: 5 (lower is better)
Translates to: FQGRTSSTPSAQPGL*DSDFPSQRLLLSHS
Trigger: AGAATGCGAGAGAAGCAGCCTTTGAGAAGGGAAGTCACTATCCCAGAGCCCAGGCTGAGCGGATGGAGTTGAGGAAGTACGGCCCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373691.4
CDS TCA 90 bp AGGAACTCTTTTGTGATTGAGTCTGATTTAGTCTGTGATTTACTCTaGGCAGCTCCTCCTATAACTGTCCCCGCCAGTCTTCCAGGGCCG +
Preference number: 5 (lower is better)
Translates to: RNSFVIESDLVCDLL*AAPPITVPASLPGP
Trigger: CGGCCCTGGAAGACTGGCGGGGACAGTTATAGGAGGAGCTGCTCAGAGTAAATCACAGACTAAATCAGACTCAATCACAAAAGAGTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373691.4
CDS CCA 72 bp ATCGGCCCAGGGACCCCTCAAGGACCATGGCTGGGCTaGTGCTCTGGCTGCTGGGTGGTGTGCTGCCTGCCC +
Preference number: 6 (lower is better)
Translates to: IGPGTPQGPWLG*CSGCWVVCCLP
Trigger: GGGCAGGCAGCACACCACCCAGCAGCCAGAGCACCAGCCCAGCCATGGTCCTTGAGGGGTCCCTGGGCCGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373691.4
CDS CAA 90 bp CTGCAGCACCCGCAGAGCCGTGCGGCCCACCTGTGGGAAGTTGTATaGGCAGTGGGTGGCGTTGAGGCGCTCGTCGTGGTGGGCCGACAG +
Preference number: 6 (lower is better)
Translates to: LQHPQSRAAHLWEVV*AVGGVEALVVVGRQ
Trigger: CTGTCGGCCCACCACGACGAGCGCCTCAACGCCACCCACTGCCAATACAACTTCCCACAGGTGGGCCGCACGGCTCTGCGGGTGCTGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS CCA 72 bp GCCGTGCGGCCCACCTGTGGGAAGTTGTATTGGCAGTaGGTGGCGTTGAGGCGCTCGTCGTGGTGGGCCGAC +
Preference number: 6 (lower is better)
Translates to: AVRPTCGKLYWQ*VALRRSSWWAD
Trigger: GTCGGCCCACCACGACGAGCGCCTCAACGCCACCCACTGCCAATACAACTTCCCACAGGTGGGCCGCACGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS CCA 72 bp CGGCGGGAAGACGATGGCTGCCTCTGGAGCCCTCTCTaGTTGGGGCAGCCCAGGCGCAAGAGCAGCATCCAC +
Preference number: 6 (lower is better)
Translates to: RREDDGCLWSPL*LGQPRRKSSIH
Trigger: GTGGATGCTGCTCTTGCGCCTGGGCTGCCCCAACCAGAGAGGGCTCCAGAGGCAGCCATCGTCTTCCCGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS GCA 72 bp GCCAGAGCCAAAGACCCACTGGACGGCAGCGTCCACTaGCCAGAGCGGCAGTGTCAGCACCAGCAGCGTGTC +
Preference number: 6 (lower is better)
Translates to: ARAKDPLDGSVH*PERQCQHQQRV
Trigger: GACACGCTGCTGGTGCTGACACTGCCGCTCTGGGCAGTGGACGCTGCCGTCCAGTGGGTCTTTGGCTCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS CAA 72 bp CCGCAGAGCCGTGCGGCCCACCTGTGGGAAGTTGTATaGGCAGTGGGTGGCGTTGAGGCGCTCGTCGTGGTG +
Preference number: 6 (lower is better)
Translates to: PQSRAAHLWEVV*AVGGVEALVVV
Trigger: CACCACGACGAGCGCCTCAACGCCACCCACTGCCAATACAACTTCCCACAGGTGGGCCGCACGGCTCTGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS CAA 72 bp AGCACCCGCAGAGCCGTGCGGCCCACCTGTGGGAAGTaGTATTGGCAGTGGGTGGCGTTGAGGCGCTCGTCG +
Preference number: 6 (lower is better)
Translates to: STRRAVRPTCGK*YWQWVALRRSS
Trigger: CGACGAGCGCCTCAACGCCACCCACTGCCAATACAACTTCCCACAGGTGGGCCGCACGGCTCTGCGGGTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS GCA 72 bp TGTCTGCTACAGCTAGGTGGAGCAGGAAGGTGTCGGTaGTGCTCAGGGCTGTCCGCCGGCTCAGCAGCACGG +
Preference number: 6 (lower is better)
Translates to: CLLQLGGAGRCR*CSGLSAGSAAR
Trigger: CCGTGCTGCTGAGCCGGCGGACAGCCCTGAGCAGCACCGACACCTTCCTGCTCCACCTAGCTGTAGCAGACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS GCA 72 bp TCAGACCAGGATGAATCCCGGCGGGAAGACGATGGCTaGCTCTGGAGCCCTCTCTGGTTGGGGCAGCCCAGG +
Preference number: 6 (lower is better)
Translates to: SDQDESRREDDG*LWSPLWLGQPR
Trigger: CCTGGGCTGCCCCAACCAGAGAGGGCTCCAGAGGCAGCCATCGTCTTCCCGCCGGGATTCATCCTGGTCTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS CCA 72 bp CCTGCCACTTTGCAGAGGCCAGAGCCAAAGACCCACTaGACGGCAGCGTCCACTGCCCAGAGCGGCAGTGTC +
Preference number: 6 (lower is better)
Translates to: PATLQRPEPKTH*TAASTAQSGSV
Trigger: GACACTGCCGCTCTGGGCAGTGGACGCTGCCGTCCAGTGGGTCTTTGGCTCTGGCCTCTGCAAAGTGGCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS CCA 72 bp GCGCTCGTCGTGGTGGGCCGACAGGAAGATGAAGTCTaGGAGGGCGAAAAGCAGGCAGAGCCCCCAGACAGC +
Preference number: 6 (lower is better)
Translates to: ALVVVGRQEDEV*EGEKQAEPPDS
Trigger: GCTGTCTGGGGGCTCTGCCTGCTTTTCGCCCTCCCAGACTTCATCTTCCTGTCGGCCCACCACGACGAGCGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS CCA 72 bp GGGAAGACGATGGCTGCCTCTGGAGCCCTCTCTGGTTaGGGCAGCCCAGGCGCAAGAGCAGCATCCACATCC +
Preference number: 6 (lower is better)
Translates to: GKTMAASGALSG*GSPGARAASTS
Trigger: GGATGTGGATGCTGCTCTTGCGCCTGGGCTGCCCCAACCAGAGAGGGCTCCAGAGGCAGCCATCGTCTTCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS CAA 90 bp GCCGTGCGGCCCACCTGTGGGAAGTTGTATTGGCAGTGGGTGGCGTaGAGGCGCTCGTCGTGGTGGGCCGACAGGAAGATGAAGTCTGGG +
Preference number: 6 (lower is better)
Translates to: AVRPTCGKLYWQWVA*RRSSWWADRKMKSG
Trigger: CCCAGACTTCATCTTCCTGTCGGCCCACCACGACGAGCGCCTCAACGCCACCCACTGCCAATACAACTTCCCACAGGTGGGCCGCACGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS CCA 72 bp TCCAGGAGGGCGGCAACCTCGGCGTCATTTAGCACTTaGTGGTCACTCACCTGTGAGGGCGGGAACGGGGAG +
Preference number: 6 (lower is better)
Translates to: SRRAATSASFST*WSLTCEGGNGE
Trigger: CTCCCCGTTCCCGCCCTCACAGGTGAGTGACCACCAAGTGCTAAATGACGCCGAGGTTGCCGCCCTCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373691.4
CDS CCA 72 bp CAGGAAGGCCCGGTCGAAGTTCAGGCTGAAGTCCTGTaGGCAGGGCGGGGAGGTACAGCACGAGTCACTCTC +
Preference number: 6 (lower is better)
Translates to: QEGPVEVQAEVL*AGRGGTARVTL
Trigger: GAGAGTGACTCGTGCTGTACCTCCCCGCCCTGCCCACAGGACTTCAGCCTGAACTTCGACCGGGCCTTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS CAA 90 bp GAGGTGACCGACTTGGCCACGTCTACCCTGCTTTCTCGGCCACAGTaGCGGGCCAAAGCGCCCAGGTCCATGAGGATGTCCACCAGCACC +
Preference number: 6 (lower is better)
Translates to: EVTDLATSTLLSRPQ*RAKAPRSMRMSTST
Trigger: GGTGCTGGTGGACATCCTCATGGACCTGGGCGCTTTGGCCCGCAACTGTGGCCGAGAAAGCAGGGTAGACGTGGCCAAGTCGGTCACCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS CCA 72 bp AGGAGGGCGGCAACCTCGGCGTCATTTAGCACTTGGTaGTCACTCACCTGTGAGGGCGGGAACGGGGAGGAA +
Preference number: 6 (lower is better)
Translates to: RRAATSASFSTW*SLTCEGGNGEE
Trigger: TTCCTCCCCGTTCCCGCCCTCACAGGTGAGTGACCACCAAGTGCTAAATGACGCCGAGGTTGCCGCCCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373691.4
CDS CCA 72 bp TTGTATTGGCAGTGGGTGGCGTTGAGGCGCTCGTCGTaGTGGGCCGACAGGAAGATGAAGTCTGGGAGGGCG +
Preference number: 6 (lower is better)
Translates to: LYWQWVALRRSS*WADRKMKSGRA
Trigger: CGCCCTCCCAGACTTCATCTTCCTGTCGGCCCACCACGACGAGCGCCTCAACGCCACCCACTGCCAATACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS CAA 72 bp CCCACCTGTGGGAAGTTGTATTGGCAGTGGGTGGCGTaGAGGCGCTCGTCGTGGTGGGCCGACAGGAAGATG +
Preference number: 6 (lower is better)
Translates to: PTCGKLYWQWVA*RRSSWWADRKM
Trigger: CATCTTCCTGTCGGCCCACCACGACGAGCGCCTCAACGCCACCCACTGCCAATACAACTTCCCACAGGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS CAA 72 bp GACTTGGCCACGTCTACCCTGCTTTCTCGGCCACAGTaGCGGGCCAAAGCGCCCAGGTCCATGAGGATGTCC +
Preference number: 6 (lower is better)
Translates to: DLATSTLLSRPQ*RAKAPRSMRMS
Trigger: GGACATCCTCATGGACCTGGGCGCTTTGGCCCGCAACTGTGGCCGAGAAAGCAGGGTAGACGTGGCCAAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS CCA 72 bp TATTGGCAGTGGGTGGCGTTGAGGCGCTCGTCGTGGTaGGCCGACAGGAAGATGAAGTCTGGGAGGGCGAAA +
Preference number: 6 (lower is better)
Translates to: YWQWVALRRSSW*ADRKMKSGRAK
Trigger: TTTCGCCCTCCCAGACTTCATCTTCCTGTCGGCCCACCACGACGAGCGCCTCAACGCCACCCACTGCCAATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373691.4
ENST00000373693.4
CDS TCA 72 bp CCTTCTCAAAGGCTGCTTCTCTCGCATTCTTCTGCGTaGTCCCATCGGCCCAGGGACCCCTCAAGGACCATG +
Preference number: 6 (lower is better)
Translates to: PSQRLLLSHSSA*SHRPRDPSRTM
Trigger: CATGGTCCTTGAGGGGTCCCTGGGCCGATGGGATCACGCAGAAGAATGCGAGAGAAGCAGCCTTTGAGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373691.4
CDS GCA 72 bp CTTCCCTTCTCAAAGGCTGCTTCTCTCGCATTCTTCTaGGTGATCCCATCGGCCCAGGGACCCCTCAAGGAC +
Preference number: 6 (lower is better)
Translates to: LPFSKAASLAFF*VIPSAQGPLKD
Trigger: GTCCTTGAGGGGTCCCTGGGCCGATGGGATCACGCAGAAGAATGCGAGAGAAGCAGCCTTTGAGAAGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373691.4
CDS GCA 72 bp CTGGGCTCTGGGATAGTGACTTCCCTTCTCAAAGGCTaGTTCTCTCGCATTCTTCTGCGTGATCCCATCGGC +
Preference number: 6 (lower is better)
Translates to: LGSGIVTSLLKG*FSRILLRDPIG
Trigger: GCCGATGGGATCACGCAGAAGAATGCGAGAGAAGCAGCCTTTGAGAAGGGAAGTCACTATCCCAGAGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373691.4
CDS TCA 72 bp TTTGTGATTGAGTCTGATTTAGTCTGTGATTTACTCTaGGCAGCTCCTCCTATAACTGTCCCCGCCAGTCTT +
Preference number: 6 (lower is better)
Translates to: FVIESDLVCDLL*AAPPITVPASL
Trigger: AAGACTGGCGGGGACAGTTATAGGAGGAGCTGCTCAGAGTAAATCACAGACTAAATCAGACTCAATCACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373691.4