Pregenerated sensors for CXCR2 (Homo sapiens)
Ensembl gene IDs: ENSG00000180871Ensembl transcript IDs: ENST00000318507.7, ENST00000415392.5, ENST00000418878.1, ENST00000449014.5, ENST00000453237.5, ENST00000454148.1
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTTTTGATACTAGCCATCCTAATGAGTATGCAGAGCTGTCTCACTaGAGTGTAGATTTTCACTTCTTAGAACATAGAGTGCCATGGGCT | + |
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Preference number: 1 (lower is better) Translates to: SFDTSHPNEYAELSH*SVDFHFLEHRVPWA Trigger: AGCCCATGGCACTCTATGTTCTAAGAAGTGAAAATCTACACTCCAGTGAGACAGCTCTGCATACTCATTAGGATGGCTAGTATCAAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| 3UTR TCA 90 bp | CATTTGGGTTGCTTCTGCCTTTTGGGTCTTGTGAATAAGCTGCTATaGATATTGGTGTACAAATATGGGTTCAAGTCCCTGCTTTCATTT | + |
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Preference number: 1 (lower is better) Translates to: HLGCFCLLGLVNKLL*ILVYKYGFKSLLSF Trigger: AAATGAAAGCAGGGACTTGAACCCATATTTGTACACCAATATTCATAGCAGCTTATTCACAAGACCCAAAAGGCAGAAGCAACCCAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| 3UTR-3UTR GCA 90 bp | ATTGGTGTACAAATATGGGTTCAAGTCCCTGCTTTCATTTCTTGTGGGTCAATTTCGCTCAGGCTGGAGTaGAGGGGCACAATCTCGGCT | + |
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Preference number: 2 (lower is better) Translates to: IGVQIWVQVPAFISCGSISLRLE*RGTISA Trigger: AGCCGAGATTGTGCCCCTGCACTCCAGCCTGAGCGA...AATTGACCCACAAGAAATGAAAGCAGGGACTTGAACCCATATTTGTACACCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| 3UTR-3UTR GCA 90 bp | TTGCGGTACAACTATCACTACTGTTTATCTGCAGAACTTTTTCAACATCCTAAAAACCGTCACTTCCCATaGTCCCCTCCCCTCAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: LRYNYHYCLSAELFQHPKNRHFP*SPPLSP Trigger: GGGACTGAGGGGAGGGGAGCATGGGAAGTGACGGTT...TTTAGGATGTTGAAAAAGTTCTGCAGATAAACAGTAGTGATAGTTGTACCGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| 3UTR-3UTR CCA 90 bp | TTGCGGTACAACTATCACTACTGTTTATCTGCAGAACTTTTTCAACATCCTAAACACTGTCGCTCAGGCTaGAGTGCAGGGGCACAATCT | + |
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Preference number: 2 (lower is better) Translates to: LRYNYHYCLSAELFQHPKHCRSG*SAGAQS Trigger: AGATTGTGCCCCTGCACTCCAGCCTGAGCGACAGTG...TTTAGGATGTTGAAAAAGTTCTGCAGATAAACAGTAGTGATAGTTGTACCGCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| 3UTR-3UTR CCA 90 bp | AATATTGGTGTACAAATATGGGTTCAAGTCCCTGCTTTCATTTCTTGTGGGTCAGCAGAGCTGTCTCACTaGAGTGTAGATTTTCACTTC | + |
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Preference number: 2 (lower is better) Translates to: NIGVQIWVQVPAFISCGSAELSH*SVDFHF Trigger: GAAGTGAAAATCTACACTCCAGTGAGACAGCTCTGC...TGACCCACAAGAAATGAAAGCAGGGACTTGAACCCATATTTGTACACCAATATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| 3UTR CAA 90 bp | CCTCAGTCCCTGGTAATCACTGTTCTGCTTTCTGTCTCTGTAAATTaGTTCACTCTCAGTACCTCATGTAGGTGGAATCATAAACTATTT | + |
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Preference number: 2 (lower is better) Translates to: PQSLVITVLLSVSVN*FTLSTSCRWNHKLF Trigger: AAATAGTTTATGATTCCACCTACATGAGGTACTGAGAGTGAACAAATTTACAGAGACAGAAAGCAGAACAGTGATTACCAGGGACTGAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| 3UTR-3UTR TCA 90 bp | AATATTGGTGTACAAATATGGGTTCAAGTCCCTGCTTTCATTTCTTGTGGGTCACTATGTCTGAAGTTTTaGGGAAAGCTGCCATACTGT | + |
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Preference number: 2 (lower is better) Translates to: NIGVQIWVQVPAFISCGSLCLKF*GKLPYC Trigger: ACAGTATGGCAGCTTTCCTCAAAACTTCAGACATAG...TGACCCACAAGAAATGAAAGCAGGGACTTGAACCCATATTTGTACACCAATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| 3UTR-3UTR CCA 90 bp | TTGCGGTACAACTATCACTACTGTTTATCTGCAGAACTTTTTCAACATCCTAAATACTGTCTTCTGCAGTaGTCACACCATTTTACAATC | + |
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Preference number: 2 (lower is better) Translates to: LRYNYHYCLSAELFQHPKYCLLQ*SHHFTI Trigger: GATTGTAAAATGGTGTGACCACTGCAGAAGACAGTA...TTTAGGATGTTGAAAAAGTTCTGCAGATAAACAGTAGTGATAGTTGTACCGCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| 3UTR TCA 72 bp | TGCTTCTGCCTTTTGGGTCTTGTGAATAAGCTGCTATaGATATTGGTGTACAAATATGGGTTCAAGTCCCTG | + |
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Preference number: 3 (lower is better) Translates to: CFCLLGLVNKLL*ILVYKYGFKSL Trigger: CAGGGACTTGAACCCATATTTGTACACCAATATTCATAGCAGCTTATTCACAAGACCCAAAAGGCAGAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| 3UTR CCA 72 bp | ACTAGCCATCCTAATGAGTATGCAGAGCTGTCTCACTaGAGTGTAGATTTTCACTTCTTAGAACATAGAGTG | + |
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Preference number: 3 (lower is better) Translates to: TSHPNEYAELSH*SVDFHFLEHRV Trigger: CACTCTATGTTCTAAGAAGTGAAAATCTACACTCCAGTGAGACAGCTCTGCATACTCATTAGGATGGCTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| 3UTR-3UTR CAA 90 bp | ATTGGTGTACAAATATGGGTTCAAGTCCCTGCTTTCATTTCTTGTGGGTCAATTTCTATGTCTGAAGTTTaGAGGAAAGCTGCCATACTG | + |
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Preference number: 3 (lower is better) Translates to: IGVQIWVQVPAFISCGSISMSEV*RKAAIL Trigger: CAGTATGGCAGCTTTCCTCAAAACTTCAGACATAGA...AATTGACCCACAAGAAATGAAAGCAGGGACTTGAACCCATATTTGTACACCAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| 3UTR-3UTR CAA 90 bp | TTGCGGTACAACTATCACTACTGTTTATCTGCAGAACTTTTTCAACATCCTAAACCCTGCTTTCATTTCTaGTGGGTCAATTCCTATAAG | + |
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Preference number: 3 (lower is better) Translates to: LRYNYHYCLSAELFQHPKPCFHF*WVNSYK Trigger: CTTATAGGAATTGACCCACAAGAAATGAAAGCAGGG...TTTAGGATGTTGAAAAAGTTCTGCAGATAAACAGTAGTGATAGTTGTACCGCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS-3UTR GCA 90 bp | AGTTTCTCCTCTACATCTTCATGGACTGAGACAGAGTCTCACTGTCGCTCAGGCTCGCTCAGGCTGGAGTaGAGGGGCACAATCTCGGCT | + |
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Preference number: 4 (lower is better) Translates to: SFSSTSSWTETESHCRSGSLRLE*RGTISA Trigger: AGCCGAGATTGTGCCCCTGCACTCCAGCCTGAGCGA...GCCTGAGCGACAGTGAGACTCTGTCTCAGTCCATGAAGATGTAGAGGAGAAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS-3UTR CCA 90 bp | AGTTTCTCCTCTACATCTTCATGGACTGAGACAGAGTCTCACTGTCGCTCAGGCTCTGTCCTGGGACTTTaGCCCAGGACAGGTGCCACT | + |
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Preference number: 4 (lower is better) Translates to: SFSSTSSWTETESHCRSGSVLGL*PRTGAT Trigger: AGTGGCACCTGTCCTGGGCCAAAGTCCCAGGACAGA...GCCTGAGCGACAGTGAGACTCTGTCTCAGTCCATGAAGATGTAGAGGAGAAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS-3UTR CCA 90 bp | AGTTTCTCCTCTACATCTTCATGGACTGAGACAGAGTCTCACTGTCGCTCAGGCAACTTAAATCCTGACTaGGTCGCTGGGCTTTTCACC | + |
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Preference number: 4 (lower is better) Translates to: SFSSTSSWTETESHCRSGNLNPD*VAGLFT Trigger: GGTGAAAAGCCCAGCGACCCAGTCAGGATTTAAGTT...GCCTGAGCGACAGTGAGACTCTGTCTCAGTCCATGAAGATGTAGAGGAGAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS-3UTR TCA 90 bp | AGTTTCTCCTCTACATCTTCATGGACTGAGACAGAGTCTCACTGTCGCTCAGGCTTAGTGATTCTGGGATaGGTGCTGGGGATTTTCACA | + |
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Preference number: 4 (lower is better) Translates to: SFSSTSSWTETESHCRSGLVILG*VLGIFT Trigger: TGTGAAAATCCCCAGCACTCATCCCAGAATCACTAA...GCCTGAGCGACAGTGAGACTCTGTCTCAGTCCATGAAGATGTAGAGGAGAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS-3UTR GCA 90 bp | ATTGGTGTACAAATATGGGTTCAAGTCCCTGCTTTCATTTCTTGTGGGTCAATTAACCGTCACTTCCCATaGTCCCCTCCCCTCAGTCCC | + |
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Preference number: 4 (lower is better) Translates to: IGVQIWVQVPAFISCGSINRHFP*SPPLSP Trigger: GGGACTGAGGGGAGGGGAGCATGGGAAGTGACGGTT...AATTGACCCACAAGAAATGAAAGCAGGGACTTGAACCCATATTTGTACACCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS-3UTR GCA 90 bp | AGTTTCTCCTCTACATCTTCATGGACTGAGACAGAGTCTCACTGTCGCTCAGGCTGCCATACTGTCTTCTaGAGTGGTCACACCATTTTA | + |
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Preference number: 4 (lower is better) Translates to: SFSSTSSWTETESHCRSGCHTVF*SGHTIL Trigger: TAAAATGGTGTGACCACTGCAGAAGACAGTATGGCA...GCCTGAGCGACAGTGAGACTCTGTCTCAGTCCATGAAGATGTAGAGGAGAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS-3UTR GCA 90 bp | AGTTTCTCCTCTACATCTTCATGGACTGAGACAGAGTCTCACTGTCGCTCAGGCCATTTGGGTTGCTTCTaGCTTTTGGGTCTTGTGAAT | + |
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Preference number: 4 (lower is better) Translates to: SFSSTSSWTETESHCRSGHLGCF*LLGLVN Trigger: ATTCACAAGACCCAAAAGGCAGAAGCAACCCAAATG...GCCTGAGCGACAGTGAGACTCTGTCTCAGTCCATGAAGATGTAGAGGAGAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS-3UTR GCA 90 bp | AGTTTCTCCTCTACATCTTCATGGACTGAGACAGAGTCTCACTGTCGCTCAGGCGATGAACATTTGGGTTaGTTCTGCCTTTTGGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: SFSSTSSWTETESHCRSGDEHLG*FCLLGL Trigger: AAGACCCAAAAGGCAGAAGCAACCCAAATGTTCATC...GCCTGAGCGACAGTGAGACTCTGTCTCAGTCCATGAAGATGTAGAGGAGAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS-3UTR CCA 90 bp | ATTGGTGTACAAATATGGGTTCAAGTCCCTGCTTTCATTTCTTGTGGGTCAATTTCCAGGATGCCCTCCTaGGGAGGTATTCCCACAGAG | + |
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Preference number: 4 (lower is better) Translates to: IGVQIWVQVPAFISCGSISRMPS*GGIPTE Trigger: CTCTGTGGGAATACCTCCCCAGGAGGGCATCCTGGA...AATTGACCCACAAGAAATGAAAGCAGGGACTTGAACCCATATTTGTACACCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS-3UTR CCA 90 bp | ATTGGTGTACAAATATGGGTTCAAGTCCCTGCTTTCATTTCTTGTGGGTCAATTCACTGTCGCTCAGGCTaGAGTGCAGGGGCACAATCT | + |
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Preference number: 4 (lower is better) Translates to: IGVQIWVQVPAFISCGSIHCRSG*SAGAQS Trigger: AGATTGTGCCCCTGCACTCCAGCCTGAGCGACAGTG...AATTGACCCACAAGAAATGAAAGCAGGGACTTGAACCCATATTTGTACACCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS-3UTR TCA 90 bp | AATATTGGTGTACAAATATGGGTTCAAGTCCCTGCTTTCATTTCTTGTGGGTCATCACATCTTCCTGTCTaGTGGCTTCTGGAGGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: NIGVQIWVQVPAFISCGSSHLPV*WLLEEP Trigger: AGGCTCCTCCAGAAGCCATCAGACAGGAAGATGTGA...TGACCCACAAGAAATGAAAGCAGGGACTTGAACCCATATTTGTACACCAATATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS-3UTR TCA 90 bp | AATATTGGTGTACAAATATGGGTTCAAGTCCCTGCTTTCATTTCTTGTGGGTCACCCACAGAGGAACAATaGGGTCTGTCCTGGGACTTT | + |
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Preference number: 4 (lower is better) Translates to: NIGVQIWVQVPAFISCGSPTEEQ*GLSWDF Trigger: AAAGTCCCAGGACAGACCTCATTGTTCCTCTGTGGG...TGACCCACAAGAAATGAAAGCAGGGACTTGAACCCATATTTGTACACCAATATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS-3UTR GCA 90 bp | TTGCGGTACAACTATCACTACTGTTTATCTGCAGAACTTTTTCAACATCCTAAAGGGGGAAATCCAGGATaGCCTCCTGGGGAGGTATTC | + |
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Preference number: 4 (lower is better) Translates to: LRYNYHYCLSAELFQHPKGGNPG*PPGEVF Trigger: GAATACCTCCCCAGGAGGGCATCCTGGATTTCCCCC...TTTAGGATGTTGAAAAAGTTCTGCAGATAAACAGTAGTGATAGTTGTACCGCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS-3UTR GCA 90 bp | AATATTGGTGTACAAATATGGGTTCAAGTCCCTGCTTTCATTTCTTGTGGGTCAAGAGCAGCTGTGACCTaGTGTTATTGGAGTGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: NIGVQIWVQVPAFISCGSRAAVT*CYWSGH Trigger: GTGGCCACTCCAATAACAGCAGGTCACAGCTGCTCT...TGACCCACAAGAAATGAAAGCAGGGACTTGAACCCATATTTGTACACCAATATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS-3UTR GCA 90 bp | ATTGGTGTACAAATATGGGTTCAAGTCCCTGCTTTCATTTCTTGTGGGTCAATTACTTCTGACCTGGGTTaGAAGGGGGAAATCCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: IGVQIWVQVPAFISCGSITSDLG*KGEIQD Trigger: ATCCTGGATTTCCCCCTTGCAACCCAGGTCAGAAGT...AATTGACCCACAAGAAATGAAAGCAGGGACTTGAACCCATATTTGTACACCAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS-3UTR CCA 90 bp | ATTGGTGTACAAATATGGGTTCAAGTCCCTGCTTTCATTTCTTGTGGGTCAATTACTGTGCCTCAAGGTTaGGTGGTAGTCAGAGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: IGVQIWVQVPAFISCGSITVPQG*VVVRAV Trigger: AACAGCTCTGACTACCACCCAACCTTGAGGCACAGT...AATTGACCCACAAGAAATGAAAGCAGGGACTTGAACCCATATTTGTACACCAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS-3UTR CCA 90 bp | ATTGGTGTACAAATATGGGTTCAAGTCCCTGCTTTCATTTCTTGTGGGTCAATTCTGCTGTTATTGGAGTaGCCACCGATGTCTTCACTG | + |
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Preference number: 4 (lower is better) Translates to: IGVQIWVQVPAFISCGSILLLLE*PPMSSL Trigger: CAGTGAAGACATCGGTGGCCACTCCAATAACAGCAG...AATTGACCCACAAGAAATGAAAGCAGGGACTTGAACCCATATTTGTACACCAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS-3UTR TCA 90 bp | TTGCGGTACAACTATCACTACTGTTTATCTGCAGAACTTTTTCAACATCCTAAACCAGAAGAGCAGCTGTaGCCTGCTGTTATTGGAGTG | + |
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Preference number: 4 (lower is better) Translates to: LRYNYHYCLSAELFQHPKPEEQL*PAVIGV Trigger: CACTCCAATAACAGCAGGTCACAGCTGCTCTTCTGG...TTTAGGATGTTGAAAAAGTTCTGCAGATAAACAGTAGTGATAGTTGTACCGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS-3UTR GCA 90 bp | TTGCGGTACAACTATCACTACTGTTTATCTGCAGAACTTTTTCAACATCCTAAATTGGCCCAGGACAGGTaGCACTTAGTGATTCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: LRYNYHYCLSAELFQHPKLAQDR*HLVILG Trigger: TCCCAGAATCACTAAGTGGCACCTGTCCTGGGCCAA...TTTAGGATGTTGAAAAAGTTCTGCAGATAAACAGTAGTGATAGTTGTACCGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS-3UTR CCA 90 bp | AATATTGGTGTACAAATATGGGTTCAAGTCCCTGCTTTCATTTCTTGTGGGTCAATGAAACTTCTGACCTaGGTTGCAAGGGGGAAATCC | + |
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Preference number: 4 (lower is better) Translates to: NIGVQIWVQVPAFISCGSMKLLT*VARGKS Trigger: GGATTTCCCCCTTGCAACCCAGGTCAGAAGTTTCAT...TGACCCACAAGAAATGAAAGCAGGGACTTGAACCCATATTTGTACACCAATATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS-3UTR CCA 90 bp | TTGCGGTACAACTATCACTACTGTTTATCTGCAGAACTTTTTCAACATCCTAAAGATTTCCAGGGATTCTaGTTCACATGGGGCGGCATC | + |
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Preference number: 4 (lower is better) Translates to: LRYNYHYCLSAELFQHPKDFQGF*FTWGGI Trigger: GATGCCGCCCCATGTGAACCAGAATCCCTGGAAATC...TTTAGGATGTTGAAAAAGTTCTGCAGATAAACAGTAGTGATAGTTGTACCGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS-3UTR GCA 90 bp | AATATTGGTGTACAAATATGGGTTCAAGTCCCTGCTTTCATTTCTTGTGGGTCAATGGGTTCAAGTCCCTaGTTTCATTTCTTGTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: NIGVQIWVQVPAFISCGSMGSSP*FHFLWV Trigger: GACCCACAAGAAATGAAAGCAGGGACTTGAACCCAT...TGACCCACAAGAAATGAAAGCAGGGACTTGAACCCATATTTGTACACCAATATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS-3UTR CCA 90 bp | AATATTGGTGTACAAATATGGGTTCAAGTCCCTGCTTTCATTTCTTGTGGGTCATTCTGGGATGAGTGCTaGGGATTTTCACATCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: NIGVQIWVQVPAFISCGSFWDEC*GFSHLP Trigger: AGGAAGATGTGAAAATCCCCAGCACTCATCCCAGAA...TGACCCACAAGAAATGAAAGCAGGGACTTGAACCCATATTTGTACACCAATATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS-3UTR CCA 90 bp | TTGCGGTACAACTATCACTACTGTTTATCTGCAGAACTTTTTCAACATCCTAAAGTGACCTGCTGTTATTaGAGTGGCCACCGATGTCTT | + |
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Preference number: 4 (lower is better) Translates to: LRYNYHYCLSAELFQHPKVTCCY*SGHRCL Trigger: AAGACATCGGTGGCCACTCCAATAACAGCAGGTCAC...TTTAGGATGTTGAAAAAGTTCTGCAGATAAACAGTAGTGATAGTTGTACCGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS-3UTR TCA 90 bp | ATTGGTGTACAAATATGGGTTCAAGTCCCTGCTTTCATTTCTTGTGGGTCAATTGCCTTTTGGGTCTTGTaGATAAGCTGCTATGAATAT | + |
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Preference number: 4 (lower is better) Translates to: IGVQIWVQVPAFISCGSIAFWVL*ISCYEY Trigger: ATATTCATAGCAGCTTATTCACAAGACCCAAAAGGC...AATTGACCCACAAGAAATGAAAGCAGGGACTTGAACCCATATTTGTACACCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS-3UTR CCA 90 bp | TTGCGGTACAACTATCACTACTGTTTATCTGCAGAACTTTTTCAACATCCTAAAGCAGAGCTGTCTCACTaGAGTGTAGATTTTCACTTC | + |
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Preference number: 4 (lower is better) Translates to: LRYNYHYCLSAELFQHPKAELSH*SVDFHF Trigger: GAAGTGAAAATCTACACTCCAGTGAGACAGCTCTGC...TTTAGGATGTTGAAAAAGTTCTGCAGATAAACAGTAGTGATAGTTGTACCGCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS-3UTR TCA 90 bp | AATATTGGTGTACAAATATGGGTTCAAGTCCCTGCTTTCATTTCTTGTGGGTCATTTAATCAGCCTTGGTaGTTAAAATACCTTTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: NIGVQIWVQVPAFISCGSFNQPW*LKYLLG Trigger: CCCCAAAAGGTATTTTAATCACCAAGGCTGATTAAA...TGACCCACAAGAAATGAAAGCAGGGACTTGAACCCATATTTGTACACCAATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS-3UTR TCA 90 bp | TTGCGGTACAACTATCACTACTGTTTATCTGCAGAACTTTTTCAACATCCTAAACCACAAAATACTTGTTaGTTTCCAGGGATTCTGGTT | + |
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Preference number: 4 (lower is better) Translates to: LRYNYHYCLSAELFQHPKPQNTC*FPGILV Trigger: AACCAGAATCCCTGGAAATCAACAAGTATTTTGTGG...TTTAGGATGTTGAAAAAGTTCTGCAGATAAACAGTAGTGATAGTTGTACCGCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS-3UTR CCA 90 bp | ATTGGTGTACAAATATGGGTTCAAGTCCCTGCTTTCATTTCTTGTGGGTCAATTAGCTGCTATGAATATTaGTGTACAAATATGGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: IGVQIWVQVPAFISCGSISCYEY*CTNMGS Trigger: TGAACCCATATTTGTACACCAATATTCATAGCAGCT...AATTGACCCACAAGAAATGAAAGCAGGGACTTGAACCCATATTTGTACACCAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS-3UTR CCA 90 bp | TTGCGGTACAACTATCACTACTGTTTATCTGCAGAACTTTTTCAACATCCTAAATGCTTTCATTTCTTGTaGGTCAATTCCTATAAGTGG | + |
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Preference number: 4 (lower is better) Translates to: LRYNYHYCLSAELFQHPKCFHFL*VNSYKW Trigger: CCACTTATAGGAATTGACCCACAAGAAATGAAAGCA...TTTAGGATGTTGAAAAAGTTCTGCAGATAAACAGTAGTGATAGTTGTACCGCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS-3UTR GCA 90 bp | TTGCGGTACAACTATCACTACTGTTTATCTGCAGAACTTTTTCAACATCCTAAATCACTACTGTTTATCTaGAGAACTTTTTCAACATCC | + |
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Preference number: 4 (lower is better) Translates to: LRYNYHYCLSAELFQHPKSLLFI*RTFSTS Trigger: GGATGTTGAAAAAGTTCTGCAGATAAACAGTAGTGA...TTTAGGATGTTGAAAAAGTTCTGCAGATAAACAGTAGTGATAGTTGTACCGCAA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS TCA 90 bp | AATCCAGTGCTCAGCTGTGCTGGGGGTGGGCTGGAGGTGTATGGGTaGGCTCATGCTCCCAGGCATTATGGGTCAGCTTCAGGTTCCAGA | + |
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Preference number: 5 (lower is better) Translates to: NPVLSCAGGGLEVYG*AHAPRHYGSASGSR Trigger: TCTGGAACCTGAAGCTGACCCATAATGCCTGGGAGCATGAGCTCACCCATACACCTCCAGCCCACCCCCAGCACAGCTGAGCACTGGATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000418878.1 |
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| CDS CCA 90 bp | GGGTGGGCTGGAGGTGTATGGGTGAGCTCATGCTCCCAGGCATTATaGGTCAGCTTCAGGTTCCAGAGGGAGAGCATGCAAGTCAGGACA | + |
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Preference number: 5 (lower is better) Translates to: GWAGGVWVSSCSQAL*VSFRFQRESMQVRT Trigger: TGTCCTGACTTGCATGCTCTCCCTCTGGAACCTGAAGCTGACCCATAATGCCTGGGAGCATGAGCTCACCCATACACCTCCAGCCCACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418878.1 |
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| CDS TCA 90 bp | CCTGGGACTTTGGCCCAGGACAGGTGCCACTTAGTGATTCTGGGATaGGTGCTGGGGATTTTCACATCTTCCTGTCTGATGGCTTCTGGA | + |
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Preference number: 5 (lower is better) Translates to: PGTLAQDRCHLVILG*VLGIFTSSCLMASG Trigger: TCCAGAAGCCATCAGACAGGAAGATGTGAAAATCCCCAGCACTCATCCCAGAATCACTAAGTGGCACCTGTCCTGGGCCAAAGTCCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS-3UTR CAA 90 bp | ATTGGTGTACAAATATGGGTTCAAGTCCCTGCTTTCATTTCTTGTGGGTCAATTGTCTGTCCTGGGACTTaGGCCCAGGACAGGTGCCAC | + |
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Preference number: 5 (lower is better) Translates to: IGVQIWVQVPAFISCGSIVCPGT*AQDRCH Trigger: GTGGCACCTGTCCTGGGCCAAAGTCCCAGGACAGAC...AATTGACCCACAAGAAATGAAAGCAGGGACTTGAACCCATATTTGTACACCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS-3UTR CAA 90 bp | AGTTTCTCCTCTACATCTTCATGGACTGAGACAGAGTCTCACTGTCGCTCAGGCTCTGAAGGTGGAGATTaGTCTATCCACCTTCTGTCT | + |
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Preference number: 5 (lower is better) Translates to: SFSSTSSWTETESHCRSGSEGGD*SIHLLS Trigger: AGACAGAAGGTGGATAGACAAATCTCCACCTTCAGA...GCCTGAGCGACAGTGAGACTCTGTCTCAGTCCATGAAGATGTAGAGGAGAAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS-3UTR CAA 90 bp | AGTTTCTCCTCTACATCTTCATGGACTGAGACAGAGTCTCACTGTCGCTCAGGCTCTATGTCTGAAGTTTaGAGGAAAGCTGCCATACTG | + |
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Preference number: 5 (lower is better) Translates to: SFSSTSSWTETESHCRSGSMSEV*RKAAIL Trigger: CAGTATGGCAGCTTTCCTCAAAACTTCAGACATAGA...GCCTGAGCGACAGTGAGACTCTGTCTCAGTCCATGAAGATGTAGAGGAGAAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS-3UTR CAA 90 bp | AATATTGGTGTACAAATATGGGTTCAAGTCCCTGCTTTCATTTCTTGTGGGTCACACTGTGCCTCAAGGTaGGGTGGTAGTCAGAGCTGT | + |
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Preference number: 5 (lower is better) Translates to: NIGVQIWVQVPAFISCGSHCASR*GGSQSC Trigger: ACAGCTCTGACTACCACCCAACCTTGAGGCACAGTG...TGACCCACAAGAAATGAAAGCAGGGACTTGAACCCATATTTGTACACCAATATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS-3UTR CAA 90 bp | TTGCGGTACAACTATCACTACTGTTTATCTGCAGAACTTTTTCAACATCCTAAATGTGACCTGCTGTTATaGGAGTGGCCACCGATGTCT | + |
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Preference number: 5 (lower is better) Translates to: LRYNYHYCLSAELFQHPKCDLLL*EWPPMS Trigger: AGACATCGGTGGCCACTCCAATAACAGCAGGTCACA...TTTAGGATGTTGAAAAAGTTCTGCAGATAAACAGTAGTGATAGTTGTACCGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS-3UTR CAA 90 bp | ATTGGTGTACAAATATGGGTTCAAGTCCCTGCTTTCATTTCTTGTGGGTCAATTCCCTGCTTTCATTTCTaGTGGGTCAATTCCTATAAG | + |
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Preference number: 5 (lower is better) Translates to: IGVQIWVQVPAFISCGSIPCFHF*WVNSYK Trigger: CTTATAGGAATTGACCCACAAGAAATGAAAGCAGGG...AATTGACCCACAAGAAATGAAAGCAGGGACTTGAACCCATATTTGTACACCAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS-3UTR CAA 90 bp | TTGCGGTACAACTATCACTACTGTTTATCTGCAGAACTTTTTCAACATCCTAAAGGTTGCTTCTGCCTTTaGGGTCTTGTGAATAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: LRYNYHYCLSAELFQHPKGCFCL*GLVNKL Trigger: CAGCTTATTCACAAGACCCAAAAGGCAGAAGCAACC...TTTAGGATGTTGAAAAAGTTCTGCAGATAAACAGTAGTGATAGTTGTACCGCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS-3UTR CAA 90 bp | ATTGGTGTACAAATATGGGTTCAAGTCCCTGCTTTCATTTCTTGTGGGTCAATTACCACAAAATACTTGTaGATTTCCAGGGATTCTGGT | + |
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Preference number: 5 (lower is better) Translates to: IGVQIWVQVPAFISCGSITTKYL*ISRDSG Trigger: ACCAGAATCCCTGGAAATCAACAAGTATTTTGTGGT...AATTGACCCACAAGAAATGAAAGCAGGGACTTGAACCCATATTTGTACACCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS CAA 72 bp | TGGAGTGGCCACCGATGTCTTCACTGTGCCTCAAGGTaGGGTGGTAGTCAGAGCTCCCCTCTGCTGCTCAAC | + |
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Preference number: 6 (lower is better) Translates to: WSGHRCLHCASR*GGSQSSPLLLN Trigger: GTTGAGCAGCAGAGGGGAGCTCTGACTACCACCCAACCTTGAGGCACAGTGAAGACATCGGTGGCCACTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415392.5 |
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| CDS CCA 72 bp | CTCCAGAAGAGCAGCTGTGACCTGCTGTTATTGGAGTaGCCACCGATGTCTTCACTGTGCCTCAAGGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: LQKSSCDLLLLE*PPMSSLCLKVG Trigger: CCCAACCTTGAGGCACAGTGAAGACATCGGTGGCCACTCCAATAACAGCAGGTCACAGCTGCTCTTCTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000318507.7 ENST00000415392.5 ENST00000449014.5 ENST00000453237.5 ENST00000454148.1 |
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| CDS CAA 72 bp | TTCCCACAGAGGAACAATGAGGTCTGTCCTGGGACTTaGGCCCAGGACAGGTGCCACTTAGTGATTCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: FPQRNNEVCPGT*AQDRCHLVILG Trigger: TCCCAGAATCACTAAGTGGCACCTGTCCTGGGCCAAAGTCCCAGGACAGACCTCATTGTTCCTCTGTGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS TCA 72 bp | TGGGATGAGTGCTGGGGATTTTCACATCTTCCTGTCTaGTGGCTTCTGGAGGAGCCTACCAGTCTGAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: WDECWGFSHLPV*WLLEEPTSLKV Trigger: CACCTTCAGACTGGTAGGCTCCTCCAGAAGCCATCAGACAGGAAGATGTGAAAATCCCCAGCACTCATCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS GCA 72 bp | CAAGGTTGGGTGGTAGTCAGAGTTATGGCTTTATCATaGTCCCTCTGTCCTAGCACCCTTCAGCCACCACAG | + |
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Preference number: 6 (lower is better) Translates to: QGWVVVRVMALS*SLCPSTLQPPQ Trigger: CTGTGGTGGCTGAAGGGTGCTAGGACAGAGGGAGCATGATAAAGCCATAACTCTGACTACCACCCAACCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449014.5 |
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| CDS TCA 72 bp | TTGGCCCAGGACAGGTGCCACTTAGTGATTCTGGGATaGGTGCTGGGGATTTTCACATCTTCCTGTCTGATG | + |
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Preference number: 6 (lower is better) Translates to: LAQDRCHLVILG*VLGIFTSSCLM Trigger: CATCAGACAGGAAGATGTGAAAATCCCCAGCACTCATCCCAGAATCACTAAGTGGCACCTGTCCTGGGCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS CAA 72 bp | TGGAGTGGCCACCGATGTCTTCACTGTGCCTCAAGGTaGGGTGGTAGTCAGAGTTATGGCTTTATCATGCTC | + |
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Preference number: 6 (lower is better) Translates to: WSGHRCLHCASR*GGSQSYGFIML Trigger: GAGCATGATAAAGCCATAACTCTGACTACCACCCAACCTTGAGGCACAGTGAAGACATCGGTGGCCACTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449014.5 |
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| CDS TCA 72 bp | TTCCTGTCTGATGGCTTCTGGAGGAGCCTACCAGTCTaGAGGTGGAGATTTGTCTATCCACCTTCTGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: FLSDGFWRSLPV*RWRFVYPPSVS Trigger: AGAGACAGAAGGTGGATAGACAAATCTCCACCTTCAGACTGGTAGGCTCCTCCAGAAGCCATCAGACAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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| CDS CCA 72 bp | AAAGATGAAACAACCTTGACGATGAAACTTCTGACCTaGGTTGCAAGGGGGAAATCCAGGATGCCCTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: KDETTLTMKLLT*VARGKSRMPSW Trigger: CCAGGAGGGCATCCTGGATTTCCCCCTTGCAACCCAGGTCAGAAGTTTCATCGTCAAGGTTGTTTCATCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000318507.7 |
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