Pregenerated sensors for CXCL9 (Homo sapiens)
Ensembl gene IDs: ENSG00000138755Ensembl transcript IDs: ENST00000264888.6
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTTGGCTCACCAGCATGCTAACAGGCTTAGGACTTGCTGACATGTaGCTCAGATACTCTCTGGAGGCTGCAGTACGTGGAAGCCTAGGG | + |
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Preference number: 1 (lower is better) Translates to: AWLTSMLTGLGLADM*LRYSLEAAVRGSLG Trigger: CCCTAGGCTTCCACGTACTGCAGCCTCCAGAGAGTATCTGAGGCACATGTCAGCAAGTCCTAAGCCTGTTAGCATGCTGGTGAGCCAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| 3UTR TCA 90 bp | TCAAACTGCTTGGCTCACCAGCATGCTAACAGGCTTAGGACTTGCTaGCATGTGCCTCAGATACTCTCTGGAGGCTGCAGTACGTGGAAG | + |
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Preference number: 1 (lower is better) Translates to: SNCLAHQHANRLRTC*HVPQILSGGCSTWK Trigger: CTTCCACGTACTGCAGCCTCCAGAGAGTATCTGAGGCACATGTCAGCAAGTCCTAAGCCTGTTAGCATGCTGGTGAGCCAAGCAGTTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| 3UTR TCA 90 bp | ATGGCTTCCAAAGCCAGAAAGGAGGCTCTGAAAGCCACACACTGGTaGTCTCCAGTGGTGATACCCAATAACAATCAGCATGAATCTCTC | + |
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Preference number: 1 (lower is better) Translates to: MASKARKEALKATHW*SPVVIPNNNQHESL Trigger: GAGAGATTCATGCTGATTGTTATTGGGTATCACCACTGGAGATCACCAGTGTGTGGCTTTCAGAGCCTCCTTTCTGGCTTTGGAAGCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| 3UTR CCA 90 bp | CTGAGTGAGGATGAATTGGGAGAAGAAAGCACTTCTGTGGGGTGTTaGGGACAAGATGAGAAAGGAGTTGACTCAGATAAATCAGAGCAT | + |
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Preference number: 1 (lower is better) Translates to: LSEDELGEESTSVGC*GQDEKGVDSDKSEH Trigger: ATGCTCTGATTTATCTGAGTCAACTCCTTTCTCATCTTGTCCCCAACACCCCACAGAAGTGCTTTCTTCTCCCAATTCATCCTCACTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| 3UTR-3UTR CCA 90 bp | AGACACATTGTGTGTGAGGCCTGTAGGCTGATTCAAATACAGAGGTTGATGGCCGGAGGCTGCAGTACGTaGAAGCCTAGGGCTGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: RHIVCEACRLIQIQRLMAGGCST*KPRAAL Trigger: AAGAGCAGCCCTAGGCTTCCACGTACTGCAGCCTCC...GGCCATCAACCTCTGTATTTGAATCAGCCTACAGGCCTCACACACAATGTGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| 3UTR-3UTR CCA 90 bp | AGACACATTGTGTGTGAGGCCTGTAGGCTGATTCAAATACAGAGGTTGATGGCCGCCTCAGATACTCTCTaGAGGCTGCAGTACGTGGAA | + |
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Preference number: 2 (lower is better) Translates to: RHIVCEACRLIQIQRLMAASDTL*RLQYVE Trigger: TTCCACGTACTGCAGCCTCCAGAGAGTATCTGAGGC...GGCCATCAACCTCTGTATTTGAATCAGCCTACAGGCCTCACACACAATGTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| 3UTR-3UTR TCA 90 bp | AGTGTCCTGAAGATAATAAGTAAGAGGTTACCAGAGGCTAGCCAACATGGAGTATCCAGGCAGCTGTTGTaGGTGGGATGTGGTTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: SVLKIISKRLPEASQHGVSRQLL*VGCGWV Trigger: CACCCAACCACATCCCACTCACAACAGCTGCCTGGA...TACTCCATGTTGGCTAGCCTCTGGTAACCTCTTACTTATTATCTTCAGGACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| 3UTR-3UTR TCA 90 bp | AGACACATTGTGTGTGAGGCCTGTAGGCTGATTCAAATACAGAGGTTGATGGCCAGGCTTAGGACTTGCTaGCATGTGCCTCAGATACTC | + |
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Preference number: 2 (lower is better) Translates to: RHIVCEACRLIQIQRLMARLRTC*HVPQIL Trigger: GAGTATCTGAGGCACATGTCAGCAAGTCCTAAGCCT...GGCCATCAACCTCTGTATTTGAATCAGCCTACAGGCCTCACACACAATGTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| 3UTR-3UTR TCA 90 bp | AGTGTCCTGAAGATAATAAGTAAGAGGTTACCAGAGGCTAGCCAACATGGAGTACCAGAAAGGAGGCTCTaGAAGCCACACACTGGTGAT | + |
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Preference number: 2 (lower is better) Translates to: SVLKIISKRLPEASQHGVPERRL*KPHTGD Trigger: ATCACCAGTGTGTGGCTTTCAGAGCCTCCTTTCTGG...TACTCCATGTTGGCTAGCCTCTGGTAACCTCTTACTTATTATCTTCAGGACACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| 3UTR-3UTR GCA 90 bp | AGTGTCCTGAAGATAATAAGTAAGAGGTTACCAGAGGCTAGCCAACATGGAGTAATACTCTCTGGAGGCTaGAGTACGTGGAAGCCTAGG | + |
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Preference number: 2 (lower is better) Translates to: SVLKIISKRLPEASQHGVILSGG*STWKPR Trigger: CCTAGGCTTCCACGTACTGCAGCCTCCAGAGAGTAT...TACTCCATGTTGGCTAGCCTCTGGTAACCTCTTACTTATTATCTTCAGGACACT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| 3UTR-3UTR TCA 90 bp | AGTGTCCTGAAGATAATAAGTAAGAGGTTACCAGAGGCTAGCCAACATGGAGTAGGAGAAGAGCTGACTTaGATGAAGCAAAGGGGAACA | + |
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Preference number: 2 (lower is better) Translates to: SVLKIISKRLPEASQHGVGEELT*MKQRGT Trigger: TGTTCCCCTTTGCTTCATTCAAGTCAGCTCTTCTCC...TACTCCATGTTGGCTAGCCTCTGGTAACCTCTTACTTATTATCTTCAGGACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| 3UTR-3UTR GCA 90 bp | AGTGTCCTGAAGATAATAAGTAAGAGGTTACCAGAGGCTAGCCAACATGGAGTAAGACAATGGTCTGGTTaGCATCCTGCCCATAACAAC | + |
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Preference number: 2 (lower is better) Translates to: SVLKIISKRLPEASQHGVRQWSG*HPAHNN Trigger: GTTGTTATGGGCAGGATGGCAACCAGACCATTGTCT...TACTCCATGTTGGCTAGCCTCTGGTAACCTCTTACTTATTATCTTCAGGACACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| 3UTR-3UTR CCA 90 bp | AGTGTCCTGAAGATAATAAGTAAGAGGTTACCAGAGGCTAGCCAACATGGAGTAAAGAAAGCACTTCTGTaGGGTGTTGGGGACAAGATG | + |
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Preference number: 2 (lower is better) Translates to: SVLKIISKRLPEASQHGVKKALL*GVGDKM Trigger: CATCTTGTCCCCAACACCCCACAGAAGTGCTTTCTT...TACTCCATGTTGGCTAGCCTCTGGTAACCTCTTACTTATTATCTTCAGGACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| 3UTR-3UTR GCA 90 bp | AGTGTCCTGAAGATAATAAGTAAGAGGTTACCAGAGGCTAGCCAACATGGAGTAAGCTCAATTTCAAACTaGTTGGCTCACCAGCATGCT | + |
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Preference number: 2 (lower is better) Translates to: SVLKIISKRLPEASQHGVSSISN*LAHQHA Trigger: AGCATGCTGGTGAGCCAAGCAGTTTGAAATTGAGCT...TACTCCATGTTGGCTAGCCTCTGGTAACCTCTTACTTATTATCTTCAGGACACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| 3UTR-3UTR GCA 90 bp | AGTGTCCTGAAGATAATAAGTAAGAGGTTACCAGAGGCTAGCCAACATGGAGTAAGAGAAGAAAGGCACTaGATTGTGGTAGGATGGAGA | + |
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Preference number: 2 (lower is better) Translates to: SVLKIISKRLPEASQHGVREERH*IVVGWR Trigger: TCTCCATCCTACCACAATGCAGTGCCTTTCTTCTCT...TACTCCATGTTGGCTAGCCTCTGGTAACCTCTTACTTATTATCTTCAGGACACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| 3UTR-3UTR GCA 90 bp | AGTGTCCTGAAGATAATAAGTAAGAGGTTACCAGAGGCTAGCCAACATGGAGTAATATACTGTGGCTCTTaGCCTCAAGGAGCTGACAAT | + |
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Preference number: 2 (lower is better) Translates to: SVLKIISKRLPEASQHGVIYCGS*PQGADN Trigger: ATTGTCAGCTCCTTGAGGGCAAGAGCCACAGTATAT...TACTCCATGTTGGCTAGCCTCTGGTAACCTCTTACTTATTATCTTCAGGACACT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| 3UTR-3UTR CCA 90 bp | AGTGTCCTGAAGATAATAAGTAAGAGGTTACCAGAGGCTAGCCAACATGGAGTATGCATTGTGGTAGGATaGAGAAGAGCTGACTTGAAT | + |
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Preference number: 2 (lower is better) Translates to: SVLKIISKRLPEASQHGVCIVVG*RRADLN Trigger: ATTCAAGTCAGCTCTTCTCCATCCTACCACAATGCA...TACTCCATGTTGGCTAGCCTCTGGTAACCTCTTACTTATTATCTTCAGGACACT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| 3UTR CAA 90 bp | ACAGTCCAGAATATCCGCAAGTGTTTTACCACGTGCTTCTTATTGTaGGAGAAGCTGAGCAAACATCCTGTCATAAAAAGACAAGGATGT | + |
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Preference number: 2 (lower is better) Translates to: TVQNIRKCFTTCFLL*EKLSKHPVIKRQGC Trigger: ACATCCTTGTCTTTTTATGACAGGATGTTTGCTCAGCTTCTCCAACAATAAGAAGCACGTGGTAAAACACTTGCGGATATTCTGGACTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| 3UTR-3UTR TCA 90 bp | AGTGTCCTGAAGATAATAAGTAAGAGGTTACCAGAGGCTAGCCAACATGGAGTAGAATTAGTTAACCATTaGGTGTTCACCCATGTGGTA | + |
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Preference number: 2 (lower is better) Translates to: SVLKIISKRLPEASQHGVELVNH*VFTHVV Trigger: TACCACATGGGTGAACACTCAATGGTTAACTAATTC...TACTCCATGTTGGCTAGCCTCTGGTAACCTCTTACTTATTATCTTCAGGACACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| 3UTR-3UTR CCA 90 bp | GGTTGGGTGAACATCTGTGTAGACATGGGTATTGCTAAAATCATGGCCTTAAGCATGATGAAATTCAACTaGTGGGTGGTAGAAGAACAA | + |
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Preference number: 2 (lower is better) Translates to: GWVNICVDMGIAKIMALSMMKFN*WVVEEQ Trigger: TTGTTCTTCTACCACCCACCAGTTGAATTTCATCAT...GCTTAAGGCCATGATTTTAGCAATACCCATGTCTACACAGATGTTCACCCAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| 3UTR-3UTR CCA 90 bp | AGTGTCCTGAAGATAATAAGTAAGAGGTTACCAGAGGCTAGCCAACATGGAGTATATGCCATCCTCCTTTaGAATGATAGCGGTATAATT | + |
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Preference number: 2 (lower is better) Translates to: SVLKIISKRLPEASQHGVYAILL*NDSGII Trigger: AATTATACCGCTATCATTCCAAAGGAGGATGGCATA...TACTCCATGTTGGCTAGCCTCTGGTAACCTCTTACTTATTATCTTCAGGACACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| 3UTR-3UTR CCA 90 bp | AGTGTCCTGAAGATAATAAGTAAGAGGTTACCAGAGGCTAGCCAACATGGAGTAATGAAATTCAACTGGTaGGTGGTAGAAGAACAAAGA | + |
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Preference number: 2 (lower is better) Translates to: SVLKIISKRLPEASQHGVMKFNW*VVEEQR Trigger: TCTTTGTTCTTCTACCACCCACCAGTTGAATTTCAT...TACTCCATGTTGGCTAGCCTCTGGTAACCTCTTACTTATTATCTTCAGGACACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| 3UTR TCA 72 bp | TTGGCTCACCAGCATGCTAACAGGCTTAGGACTTGCTaGCATGTGCCTCAGATACTCTCTGGAGGCTGCAGT | + |
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Preference number: 3 (lower is better) Translates to: LAHQHANRLRTC*HVPQILSGGCS Trigger: ACTGCAGCCTCCAGAGAGTATCTGAGGCACATGTCAGCAAGTCCTAAGCCTGTTAGCATGCTGGTGAGCCAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| 3UTR-3UTR CAA 90 bp | AGTGTCCTGAAGATAATAAGTAAGAGGTTACCAGAGGCTAGCCAACATGGAGTAGATGGCCACAGCAGCTaGGTGAGGTCCAGCTCAATT | + |
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Preference number: 3 (lower is better) Translates to: SVLKIISKRLPEASQHGVDGHSS*VRSSSI Trigger: AATTGAGCTGGACCTCACCAAGCTGCTGTGGCCATC...TACTCCATGTTGGCTAGCCTCTGGTAACCTCTTACTTATTATCTTCAGGACACT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| 3UTR TCA 72 bp | AAAGCCAGAAAGGAGGCTCTGAAAGCCACACACTGGTaGTCTCCAGTGGTGATACCCAATAACAATCAGCAT | + |
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Preference number: 3 (lower is better) Translates to: KARKEALKATHW*SPVVIPNNNQH Trigger: ATGCTGATTGTTATTGGGTATCACCACTGGAGATCACCAGTGTGTGGCTTTCAGAGCCTCCTTTCTGGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| 3UTR-3UTR CAA 90 bp | AGTGTCCTGAAGATAATAAGTAAGAGGTTACCAGAGGCTAGCCAACATGGAGTAAATCTCTCAGACACATaGTGTGTGAGGCCTGTAGGC | + |
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Preference number: 3 (lower is better) Translates to: SVLKIISKRLPEASQHGVNLSDT*CVRPVG Trigger: GCCTACAGGCCTCACACACAATGTGTCTGAGAGATT...TACTCCATGTTGGCTAGCCTCTGGTAACCTCTTACTTATTATCTTCAGGACACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| 3UTR GCA 72 bp | AAAACAGTCCAGAATATCCGCAAGTGTTTTACCACGTaGTTCTTATTGTTGGAGAAGCTGAGCAAACATCCT | + |
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Preference number: 3 (lower is better) Translates to: KTVQNIRKCFTT*FLLLEKLSKHP Trigger: AGGATGTTTGCTCAGCTTCTCCAACAATAAGAAGCACGTGGTAAAACACTTGCGGATATTCTGGACTGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| 3UTR TCA 72 bp | AGAGATAGGATAAACACCCAAGAATTAGTTAACCATTaGGTGTTCACCCATGTGGTACTGAACCAAGTGAAA | + |
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Preference number: 3 (lower is better) Translates to: RDRINTQELVNH*VFTHVVLNQVK Trigger: TTTCACTTGGTTCAGTACCACATGGGTGAACACTCAATGGTTAACTAATTCTTGGGTGTTTATCCTATCTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| CDS-3UTR TCA 90 bp | AGACACATTGTGTGTGAGGCCTGTAGGCTGATTCAAATACAGAGGTTGATGGCCTCCAGGCAGCTGTTGTaGGTGGGATGTGGTTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: RHIVCEACRLIQIQRLMASRQLL*VGCGWV Trigger: CACCCAACCACATCCCACTCACAACAGCTGCCTGGA...GGCCATCAACCTCTGTATTTGAATCAGCCTACAGGCCTCACACACAATGTGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| CDS-3UTR TCA 90 bp | GGTTGGGTGAACATCTGTGTAGACATGGGTATTGCTAAAATCATGGCCTTAAGCTCCCTTGGTTGGTGCTaGTGCAGGAACAGCGACCCT | + |
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Preference number: 4 (lower is better) Translates to: GWVNICVDMGIAKIMALSSLGWC*CRNSDP Trigger: AGGGTCGCTGTTCCTGCATCAGCACCAACCAAGGGA...GCTTAAGGCCATGATTTTAGCAATACCCATGTCTACACAGATGTTCACCCAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| CDS-3UTR TCA 90 bp | GGTTGGGTGAACATCTGTGTAGACATGGGTATTGCTAAAATCATGGCCTTAAGCAGCCAGCACCTGCTCTaGGACAATGGTCTGGTTGCC | + |
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Preference number: 4 (lower is better) Translates to: GWVNICVDMGIAKIMALSSQHLL*DNGLVA Trigger: GGCAACCAGACCATTGTCTCAGAGCAGGTGCTGGCT...GCTTAAGGCCATGATTTTAGCAATACCCATGTCTACACAGATGTTCACCCAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| CDS-3UTR TCA 90 bp | AGACACATTGTGTGTGAGGCCTGTAGGCTGATTCAAATACAGAGGTTGATGGCCTCCTACACAATTCACTaGACCTCCCCTGGAAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: RHIVCEACRLIQIQRLMASYTIH*TSPGRR Trigger: CCTCCTTCCAGGGGAGGTTCAGTGAATTGTGTAGGA...GGCCATCAACCTCTGTATTTGAATCAGCCTACAGGCCTCACACACAATGTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| CDS-3UTR GCA 90 bp | AGACACATTGTGTGTGAGGCCTGTAGGCTGATTCAAATACAGAGGTTGATGGCCATACTCTCTGGAGGCTaGAGTACGTGGAAGCCTAGG | + |
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Preference number: 4 (lower is better) Translates to: RHIVCEACRLIQIQRLMAILSGG*STWKPR Trigger: CCTAGGCTTCCACGTACTGCAGCCTCCAGAGAGTAT...GGCCATCAACCTCTGTATTTGAATCAGCCTACAGGCCTCACACACAATGTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| CDS-3UTR CCA 90 bp | AGACACATTGTGTGTGAGGCCTGTAGGCTGATTCAAATACAGAGGTTGATGGCCTCACTGAACCTCCCCTaGAAGGAGGTTTCCACATCC | + |
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Preference number: 4 (lower is better) Translates to: RHIVCEACRLIQIQRLMASLNLP*KEVSTS Trigger: GGATGTGGAAACCTCCTTCCAGGGGAGGTTCAGTGA...GGCCATCAACCTCTGTATTTGAATCAGCCTACAGGCCTCACACACAATGTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| CDS-3UTR TCA 90 bp | AGACACATTGTGTGTGAGGCCTGTAGGCTGATTCAAATACAGAGGTTGATGGCCATAAAGTGGTCAGCCTaGGCGGGCAAGATGGAATCA | + |
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Preference number: 4 (lower is better) Translates to: RHIVCEACRLIQIQRLMAIKWSA*AGKMES Trigger: TGATTCCATCTTGCCCGCTCAGGCTGACCACTTTAT...GGCCATCAACCTCTGTATTTGAATCAGCCTACAGGCCTCACACACAATGTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| CDS-3UTR TCA 90 bp | AGACACATTGTGTGTGAGGCCTGTAGGCTGATTCAAATACAGAGGTTGATGGCCTTGCCCTCAAGGAGCTaGCAATCTGGTTGGAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: RHIVCEACRLIQIQRLMALPSRS*QSGWRD Trigger: ATCTCTCCAACCAGATTGTCAGCTCCTTGAGGGCAA...GGCCATCAACCTCTGTATTTGAATCAGCCTACAGGCCTCACACACAATGTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| CDS-3UTR CCA 90 bp | AGTGTCCTGAAGATAATAAGTAAGAGGTTACCAGAGGCTAGCCAACATGGAGTAGGAGGCTGCAGTACGTaGAAGCCTAGGGCTGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: SVLKIISKRLPEASQHGVGGCST*KPRAAL Trigger: AAGAGCAGCCCTAGGCTTCCACGTACTGCAGCCTCC...TACTCCATGTTGGCTAGCCTCTGGTAACCTCTTACTTATTATCTTCAGGACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| CDS-3UTR CCA 90 bp | AGACACATTGTGTGTGAGGCCTGTAGGCTGATTCAAATACAGAGGTTGATGGCCCAGGGAAATATACTGTaGCTCTTGCCCTCAAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: RHIVCEACRLIQIQRLMAQGNIL*LLPSRS Trigger: GCTCCTTGAGGGCAAGAGCCACAGTATATTTCCCTG...GGCCATCAACCTCTGTATTTGAATCAGCCTACAGGCCTCACACACAATGTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| CDS-3UTR TCA 90 bp | AGACACATTGTGTGTGAGGCCTGTAGGCTGATTCAAATACAGAGGTTGATGGCCGGTGATCTCCAGTGGTaGTACCCAATAACAATCAGC | + |
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Preference number: 4 (lower is better) Translates to: RHIVCEACRLIQIQRLMAGDLQW*YPITIS Trigger: GCTGATTGTTATTGGGTATCACCACTGGAGATCACC...GGCCATCAACCTCTGTATTTGAATCAGCCTACAGGCCTCACACACAATGTGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| CDS-3UTR GCA 90 bp | AGACACATTGTGTGTGAGGCCTGTAGGCTGATTCAAATACAGAGGTTGATGGCCTGTCTACCTGTGAGATaGAAGGTAAGTGGGTCACAG | + |
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Preference number: 4 (lower is better) Translates to: RHIVCEACRLIQIQRLMACLPVR*KVSGSQ Trigger: CTGTGACCCACTTACCTTGCATCTCACAGGTAGACA...GGCCATCAACCTCTGTATTTGAATCAGCCTACAGGCCTCACACACAATGTGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| CDS-3UTR CCA 90 bp | AGACACATTGTGTGTGAGGCCTGTAGGCTGATTCAAATACAGAGGTTGATGGCCAAGAAAGCACTTCTGTaGGGTGTTGGGGACAAGATG | + |
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Preference number: 4 (lower is better) Translates to: RHIVCEACRLIQIQRLMAKKALL*GVGDKM Trigger: CATCTTGTCCCCAACACCCCACAGAAGTGCTTTCTT...GGCCATCAACCTCTGTATTTGAATCAGCCTACAGGCCTCACACACAATGTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| CDS-3UTR CCA 90 bp | AGTGTCCTGAAGATAATAAGTAAGAGGTTACCAGAGGCTAGCCAACATGGAGTACCTGCTCTGAGACAATaGTCTGGTTGCCATCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: SVLKIISKRLPEASQHGVPALRQ*SGCHPA Trigger: GGCAGGATGGCAACCAGACCATTGTCTCAGAGCAGG...TACTCCATGTTGGCTAGCCTCTGGTAACCTCTTACTTATTATCTTCAGGACACT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| CDS-3UTR CCA 90 bp | AGTGTCCTGAAGATAATAAGTAAGAGGTTACCAGAGGCTAGCCAACATGGAGTAGATAAGACGTTCGGGTaGGATCTCCACCGGACAGCA | + |
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Preference number: 4 (lower is better) Translates to: SVLKIISKRLPEASQHGVDKTFG*DLHRTA Trigger: TGCTGTCCGGTGGAGATCCCACCCGAACGTCTTATC...TACTCCATGTTGGCTAGCCTCTGGTAACCTCTTACTTATTATCTTCAGGACACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| CDS-3UTR TCA 90 bp | AGACACATTGTGTGTGAGGCCTGTAGGCTGATTCAAATACAGAGGTTGATGGCCTCAGAACCAGCAAGATaGTGCCCAAGAGGAAAAGAA | + |
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Preference number: 4 (lower is better) Translates to: RHIVCEACRLIQIQRLMASEPAR*CPRGKE Trigger: TTCTTTTCCTCTTGGGCATCATCTTGCTGGTTCTGA...GGCCATCAACCTCTGTATTTGAATCAGCCTACAGGCCTCACACACAATGTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| CDS-3UTR TCA 90 bp | AGTGTCCTGAAGATAATAAGTAAGAGGTTACCAGAGGCTAGCCAACATGGAGTAAAAGCCACACACTGGTaGTCTCCAGTGGTGATACCC | + |
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Preference number: 4 (lower is better) Translates to: SVLKIISKRLPEASQHGVKATHW*SPVVIP Trigger: GGGTATCACCACTGGAGATCACCAGTGTGTGGCTTT...TACTCCATGTTGGCTAGCCTCTGGTAACCTCTTACTTATTATCTTCAGGACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| CDS-3UTR GCA 90 bp | GGTTGGGTGAACATCTGTGTAGACATGGGTATTGCTAAAATCATGGCCTTAAGCGGACTTGCTGACATGTaGCTCAGATACTCTCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: GWVNICVDMGIAKIMALSGLADM*LRYSLE Trigger: CTCCAGAGAGTATCTGAGGCACATGTCAGCAAGTCC...GCTTAAGGCCATGATTTTAGCAATACCCATGTCTACACAGATGTTCACCCAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| CDS-3UTR GCA 90 bp | AGACACATTGTGTGTGAGGCCTGTAGGCTGATTCAAATACAGAGGTTGATGGCCAGCTCAATTTCAAACTaGTTGGCTCACCAGCATGCT | + |
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Preference number: 4 (lower is better) Translates to: RHIVCEACRLIQIQRLMASSISN*LAHQHA Trigger: AGCATGCTGGTGAGCCAAGCAGTTTGAAATTGAGCT...GGCCATCAACCTCTGTATTTGAATCAGCCTACAGGCCTCACACACAATGTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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| CDS-3UTR GCA 90 bp | AGACACATTGTGTGTGAGGCCTGTAGGCTGATTCAAATACAGAGGTTGATGGCCAGAGAAGAAAGGCACTaGATTGTGGTAGGATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RHIVCEACRLIQIQRLMAREERH*IVVGWR Trigger: TCTCCATCCTACCACAATGCAGTGCCTTTCTTCTCT...GGCCATCAACCTCTGTATTTGAATCAGCCTACAGGCCTCACACACAATGTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS-3UTR GCA 90 bp | AGTGTCCTGAAGATAATAAGTAAGAGGTTACCAGAGGCTAGCCAACATGGAGTAGAAAGAGCCAGCACCTaGTCTGAGACAATGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SVLKIISKRLPEASQHGVERAST*SETMVW Trigger: CCAGACCATTGTCTCAGAGCAGGTGCTGGCTCTTTC...TACTCCATGTTGGCTAGCCTCTGGTAACCTCTTACTTATTATCTTCAGGACACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS-3UTR CCA 90 bp | GGTTGGGTGAACATCTGTGTAGACATGGGTATTGCTAAAATCATGGCCTTAAGCAGGTGGATAGTCCCTTaGTTGGTGCTGATGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GWVNICVDMGIAKIMALSRWIVP*LVLMQE Trigger: TTCCTGCATCAGCACCAACCAAGGGACTATCCACCT...GCTTAAGGCCATGATTTTAGCAATACCCATGTCTACACAGATGTTCACCCAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS-3UTR CCA 90 bp | AGACACATTGTGTGTGAGGCCTGTAGGCTGATTCAAATACAGAGGTTGATGGCCTTCAAGGATTGTAGGTaGATAGTCCCTTGGTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RHIVCEACRLIQIQRLMAFKDCR*IVPWLV Trigger: CACCAACCAAGGGACTATCCACCTACAATCCTTGAA...GGCCATCAACCTCTGTATTTGAATCAGCCTACAGGCCTCACACACAATGTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS-3UTR CCA 90 bp | AGACACATTGTGTGTGAGGCCTGTAGGCTGATTCAAATACAGAGGTTGATGGCCCAAGATGGAATCACATaGCTTCCAAAGCCAGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RHIVCEACRLIQIQRLMAQDGIT*LPKPER Trigger: CCTTTCTGGCTTTGGAAGCCATGTGATTCCATCTTG...GGCCATCAACCTCTGTATTTGAATCAGCCTACAGGCCTCACACACAATGTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS-3UTR CCA 90 bp | AGTGTCCTGAAGATAATAAGTAAGAGGTTACCAGAGGCTAGCCAACATGGAGTACCTGCAGAGGCTAACTaGGCACCAATCATGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SVLKIISKRLPEASQHGVPAEAN*APIMLP Trigger: TGGAAGCATGATTGGTGCCCAGTTAGCCTCTGCAGG...TACTCCATGTTGGCTAGCCTCTGGTAACCTCTTACTTATTATCTTCAGGACACT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS-3UTR TCA 90 bp | GGTTGGGTGAACATCTGTGTAGACATGGGTATTGCTAAAATCATGGCCTTAAGCGGAGAAGAGCTGACTTaGATGAAGCAAAGGGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: GWVNICVDMGIAKIMALSGEELT*MKQRGT Trigger: TGTTCCCCTTTGCTTCATTCAAGTCAGCTCTTCTCC...GCTTAAGGCCATGATTTTAGCAATACCCATGTCTACACAGATGTTCACCCAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS-3UTR GCA 90 bp | AGTGTCCTGAAGATAATAAGTAAGAGGTTACCAGAGGCTAGCCAACATGGAGTAACTACTGGGGTTCCTTaGACTCCAATCAGAACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SVLKIISKRLPEASQHGVTTGVP*TPIRTS Trigger: GCTGGTTCTGATTGGAGTGCAAGGAACCCCAGTAGT...TACTCCATGTTGGCTAGCCTCTGGTAACCTCTTACTTATTATCTTCAGGACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS-3UTR GCA 90 bp | GGTTGGGTGAACATCTGTGTAGACATGGGTATTGCTAAAATCATGGCCTTAAGCAGACAATGGTCTGGTTaGCATCCTGCCCATAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: GWVNICVDMGIAKIMALSRQWSG*HPAHNN Trigger: GTTGTTATGGGCAGGATGGCAACCAGACCATTGTCT...GCTTAAGGCCATGATTTTAGCAATACCCATGTCTACACAGATGTTCACCCAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS-3UTR CCA 90 bp | GGTTGGGTGAACATCTGTGTAGACATGGGTATTGCTAAAATCATGGCCTTAAGCACCCTTTCTCACTACTaGGGTTCCTTGCACTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: GWVNICVDMGIAKIMALSTLSHY*GSLHSN Trigger: ATTGGAGTGCAAGGAACCCCAGTAGTGAGAAAGGGT...GCTTAAGGCCATGATTTTAGCAATACCCATGTCTACACAGATGTTCACCCAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS-3UTR CCA 90 bp | GGTTGGGTGAACATCTGTGTAGACATGGGTATTGCTAAAATCATGGCCTTAAGCGTTGTGAGTGGGATGTaGTTGGGTGAACATCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GWVNICVDMGIAKIMALSVVSGM*LGEHLC Trigger: ACACAGATGTTCACCCAACCACATCCCACTCACAAC...GCTTAAGGCCATGATTTTAGCAATACCCATGTCTACACAGATGTTCACCCAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS-3UTR CCA 90 bp | AGTGTCCTGAAGATAATAAGTAAGAGGTTACCAGAGGCTAGCCAACATGGAGTACCTGAGCGGGCAAGATaGAATCACATGGCTTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SVLKIISKRLPEASQHGVPERAR*NHMASK Trigger: TTTGGAAGCCATGTGATTCCATCTTGCCCGCTCAGG...TACTCCATGTTGGCTAGCCTCTGGTAACCTCTTACTTATTATCTTCAGGACACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS-3UTR TCA 90 bp | AGACACATTGTGTGTGAGGCCTGTAGGCTGATTCAAATACAGAGGTTGATGGCCGGGTTTAGACATGTTTaGACTCCATTCTTCAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RHIVCEACRLIQIQRLMAGFRHV*TPFFSV Trigger: TACACTGAAGAATGGAGTTCAAACATGTCTAAACCC...GGCCATCAACCTCTGTATTTGAATCAGCCTACAGGCCTCACACACAATGTGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS-3UTR TCA 90 bp | AGACACATTGTGTGTGAGGCCTGTAGGCTGATTCAAATACAGAGGTTGATGGCCGAATTAGTTAACCATTaGGTGTTCACCCATGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RHIVCEACRLIQIQRLMAELVNH*VFTHVV Trigger: TACCACATGGGTGAACACTCAATGGTTAACTAATTC...GGCCATCAACCTCTGTATTTGAATCAGCCTACAGGCCTCACACACAATGTGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS-3UTR GCA 90 bp | GGTTGGGTGAACATCTGTGTAGACATGGGTATTGCTAAAATCATGGCCTTAAGCATATACTGTGGCTCTTaGCCTCAAGGAGCTGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: GWVNICVDMGIAKIMALSIYCGS*PQGADN Trigger: ATTGTCAGCTCCTTGAGGGCAAGAGCCACAGTATAT...GCTTAAGGCCATGATTTTAGCAATACCCATGTCTACACAGATGTTCACCCAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS-3UTR GCA 90 bp | GGTTGGGTGAACATCTGTGTAGACATGGGTATTGCTAAAATCATGGCCTTAAGCAAAAGACAAGGATGTTaGATCATCCCTGGTCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GWVNICVDMGIAKIMALSKRQGC*IIPGPC Trigger: ACAGGGACCAGGGATGATGCAACATCCTTGTCTTTT...GCTTAAGGCCATGATTTTAGCAATACCCATGTCTACACAGATGTTCACCCAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS-3UTR CCA 90 bp | AGACACATTGTGTGTGAGGCCTGTAGGCTGATTCAAATACAGAGGTTGATGGCCTTCATAGTGATAGAATaGAGTTCCAAGTCACTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RHIVCEACRLIQIQRLMAFIVIE*SSKSLL Trigger: CAGGAGTGACTTGGAACTCCATTCTATCACTATGAA...GGCCATCAACCTCTGTATTTGAATCAGCCTACAGGCCTCACACACAATGTGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS-3UTR TCA 90 bp | AGACACATTGTGTGTGAGGCCTGTAGGCTGATTCAAATACAGAGGTTGATGGCCCAGAATACTTATTGGTaGAGTGGTCTCTTATGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: RHIVCEACRLIQIQRLMAQNTYW*SGLLCS Trigger: ACTACATAAGAGACCACTTCACCAATAAGTATTCTG...GGCCATCAACCTCTGTATTTGAATCAGCCTACAGGCCTCACACACAATGTGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS-3UTR TCA 90 bp | GGTTGGGTGAACATCTGTGTAGACATGGGTATTGCTAAAATCATGGCCTTAAGCATAAATCAGAGCATATaGCAGGTGCACTGGAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GWVNICVDMGIAKIMALSINQSI*QVHWRE Trigger: TTCTCTCCAGTGCACCTGTCATATGCTCTGATTTAT...GCTTAAGGCCATGATTTTAGCAATACCCATGTCTACACAGATGTTCACCCAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS-3UTR TCA 90 bp | GGTTGGGTGAACATCTGTGTAGACATGGGTATTGCTAAAATCATGGCCTTAAGCAAATCATCAGCAGTGTaGGCAGTGATTCAATTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GWVNICVDMGIAKIMALSKSSAV*AVIQFG Trigger: CCCAAATTGAATCACTGCTCACACTGCTGATGATTT...GCTTAAGGCCATGATTTTAGCAATACCCATGTCTACACAGATGTTCACCCAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS-3UTR CCA 90 bp | GGTTGGGTGAACATCTGTGTAGACATGGGTATTGCTAAAATCATGGCCTTAAGCGAAAAGGTTGGTCACTaGCTGATCTATAAAGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GWVNICVDMGIAKIMALSEKVGH*LIYKVL Trigger: AAGGACTTTATAGATCAGCCAGTGACCAACCTTTTC...GCTTAAGGCCATGATTTTAGCAATACCCATGTCTACACAGATGTTCACCCAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS-3UTR CCA 90 bp | GGTTGGGTGAACATCTGTGTAGACATGGGTATTGCTAAAATCATGGCCTTAAGCGAATTTTTGTATGGTTaGGAAAAGGTTGGTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: GWVNICVDMGIAKIMALSEFLYG*EKVGHW Trigger: CCAGTGACCAACCTTTTCCCAACCATACAAAAATTC...GCTTAAGGCCATGATTTTAGCAATACCCATGTCTACACAGATGTTCACCCAACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS-3UTR GCA 90 bp | GGTTGGGTGAACATCTGTGTAGACATGGGTATTGCTAAAATCATGGCCTTAAGCAAGTGTTTTACCACGTaGTTCTTATTGTTGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GWVNICVDMGIAKIMALSKCFTT*FLLLEK Trigger: CTTCTCCAACAATAAGAAGCACGTGGTAAAACACTT...GCTTAAGGCCATGATTTTAGCAATACCCATGTCTACACAGATGTTCACCCAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS-3UTR CCA 90 bp | GGTTGGGTGAACATCTGTGTAGACATGGGTATTGCTAAAATCATGGCCTTAAGCATGAAATTCAACTGGTaGGTGGTAGAAGAACAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GWVNICVDMGIAKIMALSMKFNW*VVEEQR Trigger: TCTTTGTTCTTCTACCACCCACCAGTTGAATTTCAT...GCTTAAGGCCATGATTTTAGCAATACCCATGTCTACACAGATGTTCACCCAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS-3UTR CCA 90 bp | AGTGTCCTGAAGATAATAAGTAAGAGGTTACCAGAGGCTAGCCAACATGGAGTAAAGTCACTCCTGTATTaGATTTTGAGCCTGAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SVLKIISKRLPEASQHGVKSLLY*ILSLRN Trigger: ATTTCTCAGGCTCAAAATCCAATACAGGAGTGACTT...TACTCCATGTTGGCTAGCCTCTGGTAACCTCTTACTTATTATCTTCAGGACACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS-3UTR CCA 90 bp | AGTGTCCTGAAGATAATAAGTAAGAGGTTACCAGAGGCTAGCCAACATGGAGTAATGATGAAATTCAACTaGTGGGTGGTAGAAGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: SVLKIISKRLPEASQHGVMMKFN*WVVEEQ Trigger: TTGTTCTTCTACCACCCACCAGTTGAATTTCATCAT...TACTCCATGTTGGCTAGCCTCTGGTAACCTCTTACTTATTATCTTCAGGACACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS-3UTR CCA 90 bp | GGTTGGGTGAACATCTGTGTAGACATGGGTATTGCTAAAATCATGGCCTTAAGCAAAGGAATTTTTGTATaGTTGGGAAAAGGTTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GWVNICVDMGIAKIMALSKGIFV*LGKGWS Trigger: TGACCAACCTTTTCCCAACCATACAAAAATTCCTTT...GCTTAAGGCCATGATTTTAGCAATACCCATGTCTACACAGATGTTCACCCAACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS-3UTR CCA 90 bp | GGTTGGGTGAACATCTGTGTAGACATGGGTATTGCTAAAATCATGGCCTTAAGCAGCAGTGATTCAATTTaGGAAAGTGAGTATAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GWVNICVDMGIAKIMALSSSDSI*ESEYRF Trigger: AAACCTATACTCACTTTCCCAAATTGAATCACTGCT...GCTTAAGGCCATGATTTTAGCAATACCCATGTCTACACAGATGTTCACCCAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS-3UTR CAA 90 bp | AGACACATTGTGTGTGAGGCCTGTAGGCTGATTCAAATACAGAGGTTGATGGCCGATGGCCACAGCAGCTaGGTGAGGTCCAGCTCAATT | + |
|
Preference number: 5 (lower is better) Translates to: RHIVCEACRLIQIQRLMADGHSS*VRSSSI Trigger: AATTGAGCTGGACCTCACCAAGCTGCTGTGGCCATC...GGCCATCAACCTCTGTATTTGAATCAGCCTACAGGCCTCACACACAATGTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS-3UTR CAA 90 bp | AGACACATTGTGTGTGAGGCCTGTAGGCTGATTCAAATACAGAGGTTGATGGCCCACTACTGGGGTTCCTaGCACTCCAATCAGAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: RHIVCEACRLIQIQRLMAHYWGS*HSNQNQ Trigger: CTGGTTCTGATTGGAGTGCAAGGAACCCCAGTAGTG...GGCCATCAACCTCTGTATTTGAATCAGCCTACAGGCCTCACACACAATGTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS CCA 90 bp | GAAGGGCTTGGGGCAAATTGTTTAAGGTCTTTCAAGGATTGTAGGTaGATAGTCCCTTGGTTGGTGCTGATGCAGGAACAGCGACCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: EGLGANCLRSFKDCR*IVPWLVLMQEQRPF Trigger: AAAGGGTCGCTGTTCCTGCATCAGCACCAACCAAGGGACTATCCACCTACAATCCTTGAAAGACCTTAAACAATTTGCCCCAAGCCCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS-3UTR CAA 90 bp | AGACACATTGTGTGTGAGGCCTGTAGGCTGATTCAAATACAGAGGTTGATGGCCAATCTCTCAGACACATaGTGTGTGAGGCCTGTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RHIVCEACRLIQIQRLMANLSDT*CVRPVG Trigger: GCCTACAGGCCTCACACACAATGTGTCTGAGAGATT...GGCCATCAACCTCTGTATTTGAATCAGCCTACAGGCCTCACACACAATGTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS CCA 90 bp | GCAAATTGTTTAAGGTCTTTCAAGGATTGTAGGTGGATAGTCCCTTaGTTGGTGCTGATGCAGGAACAGCGACCCTTTCTCACTACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: ANCLRSFKDCRWIVP*LVLMQEQRPFLTTG Trigger: CCCAGTAGTGAGAAAGGGTCGCTGTTCCTGCATCAGCACCAACCAAGGGACTATCCACCTACAATCCTTGAAAGACCTTAAACAATTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS-3UTR CAA 90 bp | AGTGTCCTGAAGATAATAAGTAAGAGGTTACCAGAGGCTAGCCAACATGGAGTACTTCCACTAACCGACTaGGCTGCTTCCTCTAGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: SVLKIISKRLPEASQHGVLPLTD*AASSSA Trigger: AGCGCTAGAGGAAGCAGCCAAGTCGGTTAGTGGAAG...TACTCCATGTTGGCTAGCCTCTGGTAACCTCTTACTTATTATCTTCAGGACACT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS-3UTR CAA 90 bp | AGTGTCCTGAAGATAATAAGTAAGAGGTTACCAGAGGCTAGCCAACATGGAGTATGGATAGTCCCTTGGTaGGTGCTGATGCAGGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: SVLKIISKRLPEASQHGVWIVPW*VLMQEQ Trigger: CTGTTCCTGCATCAGCACCAACCAAGGGACTATCCA...TACTCCATGTTGGCTAGCCTCTGGTAACCTCTTACTTATTATCTTCAGGACACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS-3UTR CAA 90 bp | AGACACATTGTGTGTGAGGCCTGTAGGCTGATTCAAATACAGAGGTTGATGGCCACCACGTGCTTCTTATaGTTGGAGAAGCTGAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: RHIVCEACRLIQIQRLMATTCFL*LEKLSK Trigger: TTTGCTCAGCTTCTCCAACAATAAGAAGCACGTGGT...GGCCATCAACCTCTGTATTTGAATCAGCCTACAGGCCTCACACACAATGTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS-3UTR CAA 90 bp | GGTTGGGTGAACATCTGTGTAGACATGGGTATTGCTAAAATCATGGCCTTAAGCATTCAAATACAGAGGTaGATGGCCACAGCAGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GWVNICVDMGIAKIMALSIQIQR*MATAAW Trigger: CCAAGCTGCTGTGGCCATCAACCTCTGTATTTGAAT...GCTTAAGGCCATGATTTTAGCAATACCCATGTCTACACAGATGTTCACCCAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS-3UTR CAA 90 bp | AGACACATTGTGTGTGAGGCCTGTAGGCTGATTCAAATACAGAGGTTGATGGCCATCTCGGTGGCTATCTaGTTAGATCTTAGAAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RHIVCEACRLIQIQRLMAISVAI*LDLRKL Trigger: CAGCTTTCTAAGATCTAACAAGATAGCCACCGAGAT...GGCCATCAACCTCTGTATTTGAATCAGCCTACAGGCCTCACACACAATGTGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS-3UTR CAA 90 bp | AGACACATTGTGTGTGAGGCCTGTAGGCTGATTCAAATACAGAGGTTGATGGCCCTTTTGACGAGAACGTaGAGATTTTCGAACTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RHIVCEACRLIQIQRLMALLTRT*RFSNFQ Trigger: CTGAAAGTTCGAAAATCTCAACGTTCTCGTCAAAAG...GGCCATCAACCTCTGTATTTGAATCAGCCTACAGGCCTCACACACAATGTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS-3UTR CAA 90 bp | GGTTGGGTGAACATCTGTGTAGACATGGGTATTGCTAAAATCATGGCCTTAAGCCAAGTCACTCCTGTATaGGATTTTGAGCCTGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GWVNICVDMGIAKIMALSQVTPV*DFEPEK Trigger: TTTCTCAGGCTCAAAATCCAATACAGGAGTGACTTG...GCTTAAGGCCATGATTTTAGCAATACCCATGTCTACACAGATGTTCACCCAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS-3UTR CAA 90 bp | AGTGTCCTGAAGATAATAAGTAAGAGGTTACCAGAGGCTAGCCAACATGGAGTAACGTGCTTCTTATTGTaGGAGAAGCTGAGCAAACAT | + |
|
Preference number: 5 (lower is better) Translates to: SVLKIISKRLPEASQHGVTCFLL*EKLSKH Trigger: ATGTTTGCTCAGCTTCTCCAACAATAAGAAGCACGT...TACTCCATGTTGGCTAGCCTCTGGTAACCTCTTACTTATTATCTTCAGGACACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS-3UTR CAA 90 bp | AGTGTCCTGAAGATAATAAGTAAGAGGTTACCAGAGGCTAGCCAACATGGAGTAAACACAGAATACTTATaGGTGAAGTGGTCTCTTATG | + |
|
Preference number: 5 (lower is better) Translates to: SVLKIISKRLPEASQHGVNTEYL*VKWSLM Trigger: CATAAGAGACCACTTCACCAATAAGTATTCTGTGTT...TACTCCATGTTGGCTAGCCTCTGGTAACCTCTTACTTATTATCTTCAGGACACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS TCA 90 bp | TTAATCAGTTCCTTCACATCTGCTGAATCTGGGTTTAGACATGTTTaGACTCCATTCTTCAGTGTAGCAATGATTTCAATTTTCTCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LISSFTSAESGFRHV*TPFFSVAMISIFSQ Trigger: CTGCGAGAAAATTGAAATCATTGCTACACTGAAGAATGGAGTTCAAACATGTCTAAACCCAGATTCAGCAGATGTGAAGGAACTGATTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS CAA 72 bp | AGGTCTTTCAAGGATTGTAGGTGGATAGTCCCTTGGTaGGTGCTGATGCAGGAACAGCGACCCTTTCTCACT | + |
|
Preference number: 6 (lower is better) Translates to: RSFKDCRWIVPW*VLMQEQRPFLT Trigger: AGTGAGAAAGGGTCGCTGTTCCTGCATCAGCACCAACCAAGGGACTATCCACCTACAATCCTTGAAAGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS CCA 72 bp | TTAAGGTCTTTCAAGGATTGTAGGTGGATAGTCCCTTaGTTGGTGCTGATGCAGGAACAGCGACCCTTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LRSFKDCRWIVP*LVLMQEQRPFL Trigger: GAGAAAGGGTCGCTGTTCCTGCATCAGCACCAACCAAGGGACTATCCACCTACAATCCTTGAAAGACCTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264888.6 |
||
| CDS CAA 90 bp | AATTGTTTAAGGTCTTTCAAGGATTGTAGGTGGATAGTCCCTTGGTaGGTGCTGATGCAGGAACAGCGACCCTTTCTCACTACTGGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: NCLRSFKDCRWIVPW*VLMQEQRPFLTTGV Trigger: AACCCCAGTAGTGAGAAAGGGTCGCTGTTCCTGCATCAGCACCAACCAAGGGACTATCCACCTACAATCCTTGAAAGACCTTAAACAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264888.6 |
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