Pregenerated sensors for CXCL8 (Homo sapiens)
Ensembl gene IDs: ENSG00000169429Ensembl transcript IDs: ENST00000307407.8, ENST00000401931.1, ENST00000483500.1
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTAATACTTTTTCCACTTAGAAATAAAGGAGAAACCAAGGCACAGTaGAACAAGGACTTGTGGATCCTGGCTAGCAGACTAGGGTTGCCA | + |
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Preference number: 1 (lower is better) Translates to: LILFPLRNKGETKAQ*NKDLWILASRLGLP Trigger: TGGCAACCCTAGTCTGCTAGCCAGGATCCACAAGTCCTTGTTCCACTGTGCCTTGGTTTCTCCTTTATTTCTAAGTGGAAAAAGTATTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000307407.8 |
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| 3UTR CCA 90 bp | CTTAGAAATAAAGGAGAAACCAAGGCACAGTGGAACAAGGACTTGTaGATCCTGGCTAGCAGACTAGGGTTGCCAGATTTAACAGAAAAA | + |
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Preference number: 1 (lower is better) Translates to: LRNKGETKAQWNKDL*ILASRLGLPDLTEK Trigger: TTTTTCTGTTAAATCTGGCAACCCTAGTCTGCTAGCCAGGATCCACAAGTCCTTGTTCCACTGTGCCTTGGTTTCTCCTTTATTTCTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307407.8 |
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| 3UTR TCA 90 bp | TCTTGTATTGCATCTGGCAACCCTACAACAGACCCACACAATACATaGAGTGTTGAAGTAGATTTGCTTGAAGTTTCACTGGCATCTTCA | + |
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Preference number: 1 (lower is better) Translates to: SCIASGNPTTDPHNT*SVEVDLLEVSLASS Trigger: TGAAGATGCCAGTGAAACTTCAAGCAAATCTACTTCAACACTTCATGTATTGTGTGGGTCTGTTGTAGGGTTGCCAGATGCAATACAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307407.8 |
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| 3UTR CCA 90 bp | AAGTGCTTCCACATGTCCTCACAACATCACTGTGAGGTAAGATGGTaGCTAATACTTTTTCCACTTAGAAATAAAGGAGAAACCAAGGCA | + |
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Preference number: 1 (lower is better) Translates to: KCFHMSSQHHCEVRW*LILFPLRNKGETKA Trigger: TGCCTTGGTTTCTCCTTTATTTCTAAGTGGAAAAAGTATTAGCCACCATCTTACCTCACAGTGATGTTGTGAGGACATGTGGAAGCACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000307407.8 |
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| 3UTR TCA 90 bp | TCATTATTCCGTAATTCAACACAGCACTACCAACACAGCTGGCAATaGCAAGACTGGGAGTATCAAACTAGGATTGTTAGTTCAATTAAA | + |
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Preference number: 1 (lower is better) Translates to: SLFRNSTQHYQHSWQ*QDWEYQTRIVSSIK Trigger: TTTAATTGAACTAACAATCCTAGTTTGATACTCCCAGTCTTGTCATTGCCAGCTGTGTTGGTAGTGCTGTGTTGAATTACGGAATAATGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307407.8 |
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| 3UTR-3UTR CCA 90 bp | GAAACCAAGGCACAGTGGAACAAGGACTTGTGGATCCTGGCTAGCAGACTAGGGGTTCGGATATTCTCTTaGCCCTTGGCCTCAATTTTG | + |
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Preference number: 2 (lower is better) Translates to: ETKAQWNKDLWILASRLGVRIFS*PLASIL Trigger: CAAAATTGAGGCCAAGGGCCAAGAGAATATCCGAAC...CCCTAGTCTGCTAGCCAGGATCCACAAGTCCTTGTTCCACTGTGCCTTGGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307407.8 |
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| 3UTR-3UTR CCA 90 bp | GAAACCAAGGCACAGTGGAACAAGGACTTGTGGATCCTGGCTAGCAGACTAGGGTATTCTCTTGGCCCTTaGCCTCAATTTTGCTATTTG | + |
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Preference number: 2 (lower is better) Translates to: ETKAQWNKDLWILASRLGYSLGP*PQFCYL Trigger: CAAATAGCAAAATTGAGGCCAAGGGCCAAGAGAATA...CCCTAGTCTGCTAGCCAGGATCCACAAGTCCTTGTTCCACTGTGCCTTGGTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307407.8 |
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| 3UTR CAA 90 bp | CCACTTAGAAATAAAGGAGAAACCAAGGCACAGTGGAACAAGGACTaGTGGATCCTGGCTAGCAGACTAGGGTTGCCAGATTTAACAGAA | + |
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Preference number: 2 (lower is better) Translates to: PLRNKGETKAQWNKD*WILASRLGLPDLTE Trigger: TTCTGTTAAATCTGGCAACCCTAGTCTGCTAGCCAGGATCCACAAGTCCTTGTTCCACTGTGCCTTGGTTTCTCCTTTATTTCTAAGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307407.8 |
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| 3UTR-3UTR GCA 90 bp | ATAAAGGAGAAACCAAGGCACAGTGGAACAAGGACTTGTGGATCCTGGCTAGCACCTTGGCCTCAATTTTaGTATTTGTATATTCTCCCG | + |
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Preference number: 2 (lower is better) Translates to: IKEKPRHSGTRTCGSWLAPWPQF*YLYILP Trigger: CGGGAGAATATACAAATAGCAAAATTGAGGCCAAGG...TGCTAGCCAGGATCCACAAGTCCTTGTTCCACTGTGCCTTGGTTTCTCCTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307407.8 |
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| 3UTR-3UTR CCA 90 bp | GTTCTAACTCATTATTCCGTAATTCAACACAGCACTACCAACACAGCTGGCAATATCTTGTATTGCATCTaGCAACCCTACAACAGACCC | + |
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Preference number: 2 (lower is better) Translates to: VLTHYSVIQHSTTNTAGNILYCI*QPYNRP Trigger: GGGTCTGTTGTAGGGTTGCCAGATGCAATACAAGAT...ATTGCCAGCTGTGTTGGTAGTGCTGTGTTGAATTACGGAATAATGAGTTAGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307407.8 |
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| 3UTR CCA 72 bp | AAAGGAGAAACCAAGGCACAGTGGAACAAGGACTTGTaGATCCTGGCTAGCAGACTAGGGTTGCCAGATTTA | + |
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Preference number: 3 (lower is better) Translates to: KGETKAQWNKDL*ILASRLGLPDL Trigger: TAAATCTGGCAACCCTAGTCTGCTAGCCAGGATCCACAAGTCCTTGTTCCACTGTGCCTTGGTTTCTCCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307407.8 |
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| 3UTR-3UTR CAA 90 bp | ATAAAGGAGAAACCAAGGCACAGTGGAACAAGGACTTGTGGATCCTGGCTAGCAATATTCTCTTGGCCCTaGGCCTCAATTTTGCTATTT | + |
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Preference number: 3 (lower is better) Translates to: IKEKPRHSGTRTCGSWLAIFSWP*ASILLF Trigger: AAATAGCAAAATTGAGGCCAAGGGCCAAGAGAATAT...TGCTAGCCAGGATCCACAAGTCCTTGTTCCACTGTGCCTTGGTTTCTCCTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307407.8 |
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| 3UTR TCA 72 bp | GCATCTGGCAACCCTACAACAGACCCACACAATACATaGAGTGTTGAAGTAGATTTGCTTGAAGTTTCACTG | + |
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Preference number: 3 (lower is better) Translates to: ASGNPTTDPHNT*SVEVDLLEVSL Trigger: CAGTGAAACTTCAAGCAAATCTACTTCAACACTTCATGTATTGTGTGGGTCTGTTGTAGGGTTGCCAGATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307407.8 |
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| 3UTR-3UTR CAA 90 bp | GTTCTAACTCATTATTCCGTAATTCAACACAGCACTACCAACACAGCTGGCAATCCCTTGGCCTCAATTTaGCTATTTGTATATTCTCCC | + |
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Preference number: 3 (lower is better) Translates to: VLTHYSVIQHSTTNTAGNPLASI*LFVYSP Trigger: GGGAGAATATACAAATAGCAAAATTGAGGCCAAGGG...ATTGCCAGCTGTGTTGGTAGTGCTGTGTTGAATTACGGAATAATGAGTTAGAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307407.8 |
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| 3UTR-3UTR CAA 90 bp | TTCAAATTTAACCAGGAATCTTGTATTGCATCTGGCAACCCTACAACAGACCCAAGTGTTGAAGTAGATTaGCTTGAAGTTTCACTGGCA | + |
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Preference number: 3 (lower is better) Translates to: FKFNQESCIASGNPTTDPSVEVD*LEVSLA Trigger: TGCCAGTGAAACTTCAAGCAAATCTACTTCAACACT...TGGGTCTGTTGTAGGGTTGCCAGATGCAATACAAGATTCCTGGTTAAATTTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307407.8 |
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| 3UTR-3UTR CAA 90 bp | GTTCTAACTCATTATTCCGTAATTCAACACAGCACTACCAACACAGCTGGCAATCCTCAATTTTGCTATTaGTATATTCTCCCGTGCAAT | + |
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Preference number: 3 (lower is better) Translates to: VLTHYSVIQHSTTNTAGNPQFCY*YILPCN Trigger: ATTGCACGGGAGAATATACAAATAGCAAAATTGAGG...ATTGCCAGCTGTGTTGGTAGTGCTGTGTTGAATTACGGAATAATGAGTTAGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307407.8 |
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| CDS-3UTR CCA 90 bp | GAAACCAAGGCACAGTGGAACAAGGACTTGTGGATCCTGGCTAGCAGACTAGGGGCACCCAGTTTTCCTTaGGGTCCAGACAGAGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: ETKAQWNKDLWILASRLGAPSFP*GPDRAL Trigger: GAGAGCTCTGTCTGGACCCCAAGGAAAACTGGGTGC...CCCTAGTCTGCTAGCCAGGATCCACAAGTCCTTGTTCCACTGTGCCTTGGTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307407.8 |
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| CDS-3UTR GCA 90 bp | ATAAAGGAGAAACCAAGGCACAGTGGAACAAGGACTTGTGGATCCTGGCTAGCAACTCCTTGGCAAAACTaGACCTTCACACAGAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: IKEKPRHSGTRTCGSWLATPWQN*TFTQSC Trigger: GCAGCTCTGTGTGAAGGTGCAGTTTTGCCAAGGAGT...TGCTAGCCAGGATCCACAAGTCCTTGTTCCACTGTGCCTTGGTTTCTCCTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307407.8 |
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| CDS-3UTR CCA 90 bp | GACACAAGCTTAAACCCAGAATTTCCTGGGCAAACTATGTATGGTCTTTCTGGTGCACCCAGTTTTCCTTaGGGTCCAGACAGAGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: DTSLNPEFPGQTMYGLSGAPSFP*GPDRAL Trigger: GAGAGCTCTGTCTGGACCCCAAGGAAAACTGGGTGC...ACCAGAAAGACCATACATAGTTTGCCCAGGAAATTCTGGGTTTAAGCTTGTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000401931.1 |
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| CDS-3UTR TCA 90 bp | ATAAAGGAGAAACCAAGGCACAGTGGAACAAGGACTTGTGGATCCTGGCTAGCACTCACAACATCACTGTaGGGTAAGATGGTGGCTAAT | + |
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Preference number: 4 (lower is better) Translates to: IKEKPRHSGTRTCGSWLALTTSL*GKMVAN Trigger: ATTAGCCACCATCTTACCTCACAGTGATGTTGTGAG...TGCTAGCCAGGATCCACAAGTCCTTGTTCCACTGTGCCTTGGTTTCTCCTTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307407.8 |
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| CDS-3UTR CCA 90 bp | GAAACCAAGGCACAGTGGAACAAGGACTTGTGGATCCTGGCTAGCAGACTAGGGTTGATAAATTTGGGGTaGAAAGGTTTGGAGTATGTC | + |
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Preference number: 4 (lower is better) Translates to: ETKAQWNKDLWILASRLGLINLG*KGLEYV Trigger: GACATACTCCAAACCTTTCCACCCCAAATTTATCAA...CCCTAGTCTGCTAGCCAGGATCCACAAGTCCTTGTTCCACTGTGCCTTGGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307407.8 |
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| CDS-3UTR CCA 90 bp | ATAAAGGAGAAACCAAGGCACAGTGGAACAAGGACTTGTGGATCCTGGCTAGCAGTTCGGATATTCTCTTaGCCCTTGGCCTCAATTTTG | + |
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Preference number: 4 (lower is better) Translates to: IKEKPRHSGTRTCGSWLAVRIFS*PLASIL Trigger: CAAAATTGAGGCCAAGGGCCAAGAGAATATCCGAAC...TGCTAGCCAGGATCCACAAGTCCTTGTTCCACTGTGCCTTGGTTTCTCCTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307407.8 |
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| CDS-3UTR GCA 90 bp | AGTGTTGAAGTAGATTTGCTTGAAGTTTCACTGGCATCTTCACTGATTCTTGGAAGAAATCAGGAAGGCTaGCAAGAGAGCCACGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: SVEVDLLEVSLASSLILGRNQEG*QESHGQ Trigger: CTGGCCGTGGCTCTCTTGGCAGCCTTCCTGATTTCT...TCCAAGAATCAGTGAAGATGCCAGTGAAACTTCAAGCAAATCTACTTCAACACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307407.8 |
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| CDS-3UTR CCA 90 bp | GACACAAGCTTAAACCCAGAATTTCCTGGGCAAACTATGTATGGTCTTTCTGGTTGTGTTGGCGCAGTGTaGTCCACTCTCAATCACTCT | + |
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Preference number: 4 (lower is better) Translates to: DTSLNPEFPGQTMYGLSGCVGAV*STLNHS Trigger: AGAGTGATTGAGAGTGGACCACACTGCGCCAACACA...ACCAGAAAGACCATACATAGTTTGCCCAGGAAATTCTGGGTTTAAGCTTGTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000401931.1 |
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| CDS-3UTR GCA 90 bp | CAAACTATGTATGGTCTTTCTGGTCATGAGTACAACAAACTCACTATTGATGCTAGAAATCAGGAAGGCTaGCAAGAGAGCCACGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: QTMYGLSGHEYNKLTIDARNQEG*QESHGQ Trigger: CTGGCCGTGGCTCTCTTGGCAGCCTTCCTGATTTCT...AGCATCAATAGTGAGTTTGTTGTACTCATGACCAGAAAGACCATACATAGTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000401931.1 |
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| CDS-3UTR GCA 90 bp | TCAATTCCTGAAATTAAAGTTCGGATATTCTCTTGGCCCTTGGCCTCAATTTTGTTCTCCACAACCCTCTaGACCCAGTTTTCCTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: SIPEIKVRIFSWPLASILFSTTL*TQFSLG Trigger: CCCCAAGGAAAACTGGGTGCAGAGGGTTGTGGAGAA...CAAAATTGAGGCCAAGGGCCAAGAGAATATCCGAACTTTAATTTCAGGAATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307407.8 |
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| CDS-3UTR CCA 90 bp | GTTCTAACTCATTATTCCGTAATTCAACACAGCACTACCAACACAGCTGGCAATGATGGTTCCTTCCGGTaGTTTCTTCCTGGCTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: VLTHYSVIQHSTTNTAGNDGSFR*FLPGSC Trigger: ACAAGAGCCAGGAAGAAACCACCGGAAGGAACCATC...ATTGCCAGCTGTGTTGGTAGTGCTGTGTTGAATTACGGAATAATGAGTTAGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307407.8 |
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| CDS-3UTR CCA 90 bp | GGACACAAGCTTAAACCCAGAATTTCCTGGGCAAACTATGTATGGTCTTTCTGGTTACACACAGTGAGATaGTTCCTTCCGGTGGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: GHKLKPRISWANYVWSFWLHTVR*FLPVVS Trigger: AGAAACCACCGGAAGGAACCATCTCACTGTGTGTAA...CCAGAAAGACCATACATAGTTTGCCCAGGAAATTCTGGGTTTAAGCTTGTGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000401931.1 |
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| CDS-3UTR CCA 90 bp | TTCAAATTTAACCAGGAATCTTGTATTGCATCTGGCAACCCTACAACAGACCCATGTGTTGGCGCAGTGTaGTCCACTCTCAATCACTCT | + |
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Preference number: 4 (lower is better) Translates to: FKFNQESCIASGNPTTDPCVGAV*STLNHS Trigger: AGAGTGATTGAGAGTGGACCACACTGCGCCAACACA...TGGGTCTGTTGTAGGGTTGCCAGATGCAATACAAGATTCCTGGTTAAATTTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307407.8 |
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| CDS-3UTR CCA 90 bp | GGACACAAGCTTAAACCCAGAATTTCCTGGGCAAACTATGTATGGTCTTTCTGGAAAGTTTGTGCCTTATaGAGTGCTCCGGTGGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: GHKLKPRISWANYVWSFWKVCAL*SAPVAF Trigger: AAAAGCCACCGGAGCACTCCATAAGGCACAAACTTT...CCAGAAAGACCATACATAGTTTGCCCAGGAAATTCTGGGTTTAAGCTTGTGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000401931.1 |
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| CDS-3UTR GCA 90 bp | TTAAACCCAGAATTTCCTGGGCAAACTATGTATGGTCTTTCTGGTCATGAGTACGTCTCTGAAAGTTTGTaGCTTATGGAGTGCTCCGGT | + |
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Preference number: 4 (lower is better) Translates to: LNPEFPGQTMYGLSGHEYVSESL*LMECSG Trigger: ACCGGAGCACTCCATAAGGCACAAACTTTCAGAGAC...GTACTCATGACCAGAAAGACCATACATAGTTTGCCCAGGAAATTCTGGGTTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000401931.1 |
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| CDS-3UTR TCA 90 bp | GGACACAAGCTTAAACCCAGAATTTCCTGGGCAAACTATGTATGGTCTTTCTGGTGGTCTTTCTGGTCATaGGTACAACAAACTCACTAT | + |
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Preference number: 4 (lower is better) Translates to: GHKLKPRISWANYVWSFWWSFWS*VQQTHY Trigger: ATAGTGAGTTTGTTGTACTCATGACCAGAAAGACCA...CCAGAAAGACCATACATAGTTTGCCCAGGAAATTCTGGGTTTAAGCTTGTGTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000401931.1 |
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| CDS-3UTR GCA 90 bp | GTGACAAAGAACTTTACTAAGAGTATAGGACACAAGCTTAAACCCAGAATTTCCACTCCTTGGCAAAACTaGACCTTCACACAGAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: VTKNFTKSIGHKLKPRISTPWQN*TFTQSC Trigger: GCAGCTCTGTGTGAAGGTGCAGTTTTGCCAAGGAGT...GGAAATTCTGGGTTTAAGCTTGTGTCCTATACTCTTAGTAAAGTTCTTTGTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000401931.1 |
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| CDS-3UTR CCA 90 bp | GGAGTGACAAAGAACTTTACTAAGAGTATAGGACACAAGCTTAAACCCAGAATTGATGGTTCCTTCCGGTaGTTTCTTCCTGGCTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: GVTKNFTKSIGHKLKPRIDGSFR*FLPGSC Trigger: ACAAGAGCCAGGAAGAAACCACCGGAAGGAACCATC...AATTCTGGGTTTAAGCTTGTGTCCTATACTCTTAGTAAAGTTCTTTGTCACTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000401931.1 |
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| CDS-3UTR CCA 90 bp | TCAATTCCTGAAATTAAAGTTCGGATATTCTCTTGGCCCTTGGCCTCAATTTTGGAAACCAAGGCACAGTaGAACAAGGACTTGTGGATC | + |
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Preference number: 4 (lower is better) Translates to: SIPEIKVRIFSWPLASILETKAQ*NKDLWI Trigger: GATCCACAAGTCCTTGTTCCACTGTGCCTTGGTTTC...CAAAATTGAGGCCAAGGGCCAAGAGAATATCCGAACTTTAATTTCAGGAATTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307407.8 |
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| CDS-3UTR TCA 90 bp | GTGACAAAGAACTTTACTAAGAGTATAGGACACAAGCTTAAACCCAGAATTTCCGTGCTCTGCTGTCTCTaGAAGTTTGTGCCTTATGGA | + |
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Preference number: 4 (lower is better) Translates to: VTKNFTKSIGHKLKPRISVLCCL*KFVPYG Trigger: TCCATAAGGCACAAACTTTCAGAGACAGCAGAGCAC...GGAAATTCTGGGTTTAAGCTTGTGTCCTATACTCTTAGTAAAGTTCTTTGTCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000401931.1 |
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| CDS-3UTR TCA 90 bp | TTAAACCCAGAATTTCCTGGGCAAACTATGTATGGTCTTTCTGGTCATGAGTACGGACACTACTGGGAGTaGCAAAGAACTTTACTAAGA | + |
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Preference number: 4 (lower is better) Translates to: LNPEFPGQTMYGLSGHEYGHYWE*QRTLLR Trigger: TCTTAGTAAAGTTCTTTGTCACTCCCAGTAGTGTCC...GTACTCATGACCAGAAAGACCATACATAGTTTGCCCAGGAAATTCTGGGTTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000401931.1 |
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| CDS-3UTR CCA 90 bp | TCAATTCCTGAAATTAAAGTTCGGATATTCTCTTGGCCCTTGGCCTCAATTTTGTTACACACAGTGAGATaGTTCCTTCCGGTGGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: SIPEIKVRIFSWPLASILLHTVR*FLPVVS Trigger: AGAAACCACCGGAAGGAACCATCTCACTGTGTGTAA...CAAAATTGAGGCCAAGGGCCAAGAGAATATCCGAACTTTAATTTCAGGAATTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307407.8 |
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| CDS-3UTR TCA 90 bp | TTCAAATTTAACCAGGAATCTTGTATTGCATCTGGCAACCCTACAACAGACCCAGACCCACACAATACATaGAGTGTTGAAGTAGATTTG | + |
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Preference number: 4 (lower is better) Translates to: FKFNQESCIASGNPTTDPDPHNT*SVEVDL Trigger: CAAATCTACTTCAACACTTCATGTATTGTGTGGGTC...TGGGTCTGTTGTAGGGTTGCCAGATGCAATACAAGATTCCTGGTTAAATTTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307407.8 |
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| CDS-3UTR GCA 90 bp | TTCAAATTTAACCAGGAATCTTGTATTGCATCTGGCAACCCTACAACAGACCCACCTTGGCCTCAATTTTaGTATTTGTATATTCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: FKFNQESCIASGNPTTDPPWPQF*YLYILP Trigger: CGGGAGAATATACAAATAGCAAAATTGAGGCCAAGG...TGGGTCTGTTGTAGGGTTGCCAGATGCAATACAAGATTCCTGGTTAAATTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307407.8 |
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| CDS-3UTR CCA 90 bp | AGTGTTGAAGTAGATTTGCTTGAAGTTTCACTGGCATCTTCACTGATTCTTGGACACTGTGAGGTAAGATaGTGGCTAATACTTTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: SVEVDLLEVSLASSLILGHCEVR*WLILFP Trigger: TGGAAAAAGTATTAGCCACCATCTTACCTCACAGTG...TCCAAGAATCAGTGAAGATGCCAGTGAAACTTCAAGCAAATCTACTTCAACACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000307407.8 |
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| CDS-3UTR CCA 90 bp | GTGACAAAGAACTTTACTAAGAGTATAGGACACAAGCTTAAACCCAGAATTTCCAAACCCAGAATTTCCTaGGCAAACTATGTATGGTCT | + |
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Preference number: 4 (lower is better) Translates to: VTKNFTKSIGHKLKPRISKPRIS*ANYVWS Trigger: AGACCATACATAGTTTGCCCAGGAAATTCTGGGTTT...GGAAATTCTGGGTTTAAGCTTGTGTCCTATACTCTTAGTAAAGTTCTTTGTCAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000401931.1 |
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| CDS TCA 90 bp | TGCCAAGAGAGCCACGGCCAGCTTGGAAGTCATGTTTACACACAGTaGGATGGTTCCTTCCGGTGGTTTCTTCCTGGCTCTTGTCCTAGA | + |
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Preference number: 5 (lower is better) Translates to: CQESHGQLGSHVYTQ*DGSFRWFLPGSCPR Trigger: TCTAGGACAAGAGCCAGGAAGAAACCACCGGAAGGAACCATCTCACTGTGTGTAAACATGACTTCCAAGCTGGCCGTGGCTCTCTTGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000307407.8 ENST00000401931.1 ENST00000483500.1 |
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| CDS-3UTR CAA 90 bp | ATAAAGGAGAAACCAAGGCACAGTGGAACAAGGACTTGTGGATCCTGGCTAGCATCTTGTCCTAGAAGCTaGTGTGCTCTGCTGTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: IKEKPRHSGTRTCGSWLASCPRS*CALLSL Trigger: CAGAGACAGCAGAGCACACAAGCTTCTAGGACAAGA...TGCTAGCCAGGATCCACAAGTCCTTGTTCCACTGTGCCTTGGTTTCTCCTTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307407.8 |
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| CDS-3UTR CAA 90 bp | GAAACCAAGGCACAGTGGAACAAGGACTTGTGGATCCTGGCTAGCAGACTAGGGCCTCAATTTTGCTATTaGTATATTCTCCCGTGCAAT | + |
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Preference number: 5 (lower is better) Translates to: ETKAQWNKDLWILASRLGPQFCY*YILPCN Trigger: ATTGCACGGGAGAATATACAAATAGCAAAATTGAGG...CCCTAGTCTGCTAGCCAGGATCCACAAGTCCTTGTTCCACTGTGCCTTGGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307407.8 |
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| CDS-3UTR CAA 90 bp | ATAAAGGAGAAACCAAGGCACAGTGGAACAAGGACTTGTGGATCCTGGCTAGCAGCTAGCAGACTAGGGTaGCCAGATTTAACAGAAAAA | + |
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Preference number: 5 (lower is better) Translates to: IKEKPRHSGTRTCGSWLAASRLG*PDLTEK Trigger: TTTTTCTGTTAAATCTGGCAACCCTAGTCTGCTAGC...TGCTAGCCAGGATCCACAAGTCCTTGTTCCACTGTGCCTTGGTTTCTCCTTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307407.8 |
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| CDS-3UTR CAA 90 bp | GTTCTAACTCATTATTCCGTAATTCAACACAGCACTACCAACACAGCTGGCAATCAGTGGAACAAGGACTaGTGGATCCTGGCTAGCAGA | + |
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Preference number: 5 (lower is better) Translates to: VLTHYSVIQHSTTNTAGNQWNKD*WILASR Trigger: TCTGCTAGCCAGGATCCACAAGTCCTTGTTCCACTG...ATTGCCAGCTGTGTTGGTAGTGCTGTGTTGAATTACGGAATAATGAGTTAGAAC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307407.8 |
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| CDS-3UTR CAA 90 bp | TTCCTGGGCAAACTATGTATGGTCTTTCTGGTCATGAGTACAACAAACTCACTATCTTGTCCTAGAAGCTaGTGTGCTCTGCTGTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: FLGKLCMVFLVMSTTNSLSCPRS*CALLSL Trigger: CAGAGACAGCAGAGCACACAAGCTTCTAGGACAAGA...TAGTGAGTTTGTTGTACTCATGACCAGAAAGACCATACATAGTTTGCCCAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000401931.1 |
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| CDS-3UTR CAA 90 bp | TCAATTCCTGAAATTAAAGTTCGGATATTCTCTTGGCCCTTGGCCTCAATTTTGAGAGCCACGGCCAGCTaGGAAGTCATGTTTACACAC | + |
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Preference number: 5 (lower is better) Translates to: SIPEIKVRIFSWPLASILRATAS*EVMFTH Trigger: GTGTGTAAACATGACTTCCAAGCTGGCCGTGGCTCT...CAAAATTGAGGCCAAGGGCCAAGAGAATATCCGAACTTTAATTTCAGGAATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307407.8 |
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| CDS-3UTR CAA 90 bp | GTGACAAAGAACTTTACTAAGAGTATAGGACACAAGCTTAAACCCAGAATTTCCAGAGCCACGGCCAGCTaGGAAGTCATGTTTACACAC | + |
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Preference number: 5 (lower is better) Translates to: VTKNFTKSIGHKLKPRISRATAS*EVMFTH Trigger: GTGTGTAAACATGACTTCCAAGCTGGCCGTGGCTCT...GGAAATTCTGGGTTTAAGCTTGTGTCCTATACTCTTAGTAAAGTTCTTTGTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000401931.1 |
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| CDS-3UTR CAA 90 bp | TTCAAATTTAACCAGGAATCTTGTATTGCATCTGGCAACCCTACAACAGACCCAACAATAATTTCTGTGTaGGCGCAGTGTGGTCCACTC | + |
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Preference number: 5 (lower is better) Translates to: FKFNQESCIASGNPTTDPTIISV*AQCGPL Trigger: GAGTGGACCACACTGCGCCAACACAGAAATTATTGT...TGGGTCTGTTGTAGGGTTGCCAGATGCAATACAAGATTCCTGGTTAAATTTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307407.8 |
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| CDS-3UTR CAA 90 bp | TTCCTGGGCAAACTATGTATGGTCTTTCTGGTCATGAGTACAACAAACTCACTAACAATAATTTCTGTGTaGGCGCAGTGTGGTCCACTC | + |
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Preference number: 5 (lower is better) Translates to: FLGKLCMVFLVMSTTNSLTIISV*AQCGPL Trigger: GAGTGGACCACACTGCGCCAACACAGAAATTATTGT...TAGTGAGTTTGTTGTACTCATGACCAGAAAGACCATACATAGTTTGCCCAGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000401931.1 |
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| CDS-3UTR CAA 90 bp | GGAGTGACAAAGAACTTTACTAAGAGTATAGGACACAAGCTTAAACCCAGAATTGCTGTCTCTGAAAGTTaGTGCCTTATGGAGTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: GVTKNFTKSIGHKLKPRIAVSES*CLMECS Trigger: GGAGCACTCCATAAGGCACAAACTTTCAGAGACAGC...AATTCTGGGTTTAAGCTTGTGTCCTATACTCTTAGTAAAGTTCTTTGTCACTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000401931.1 |
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| CDS-3UTR CAA 90 bp | AGTGTTGAAGTAGATTTGCTTGAAGTTTCACTGGCATCTTCACTGATTCTTGGATTGGGGTGGAAAGGTTaGGAGTATGTCTTTATGCAC | + |
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Preference number: 5 (lower is better) Translates to: SVEVDLLEVSLASSLILGLGWKG*EYVFMH Trigger: GTGCATAAAGACATACTCCAAACCTTTCCACCCCAA...TCCAAGAATCAGTGAAGATGCCAGTGAAACTTCAAGCAAATCTACTTCAACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307407.8 |
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| CDS-3UTR CAA 90 bp | TTCAAATTTAACCAGGAATCTTGTATTGCATCTGGCAACCCTACAACAGACCCAATATTCTCTTGGCCCTaGGCCTCAATTTTGCTATTT | + |
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Preference number: 5 (lower is better) Translates to: FKFNQESCIASGNPTTDPIFSWP*ASILLF Trigger: AAATAGCAAAATTGAGGCCAAGGGCCAAGAGAATAT...TGGGTCTGTTGTAGGGTTGCCAGATGCAATACAAGATTCCTGGTTAAATTTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307407.8 |
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| CDS-3UTR CAA 90 bp | TCAATTCCTGAAATTAAAGTTCGGATATTCTCTTGGCCCTTGGCCTCAATTTTGATCACTCTCAGTTCTTaGATAAATTTGGGGTGGAAA | + |
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Preference number: 5 (lower is better) Translates to: SIPEIKVRIFSWPLASILITLSS*INLGWK Trigger: TTTCCACCCCAAATTTATCAAAGAACTGAGAGTGAT...CAAAATTGAGGCCAAGGGCCAAGAGAATATCCGAACTTTAATTTCAGGAATTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307407.8 |
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| CDS-3UTR CAA 90 bp | GGAGTGACAAAGAACTTTACTAAGAGTATAGGACACAAGCTTAAACCCAGAATTATCACTCTCAGTTCTTaGATAAATTTGGGGTGGAAA | + |
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Preference number: 5 (lower is better) Translates to: GVTKNFTKSIGHKLKPRIITLSS*INLGWK Trigger: TTTCCACCCCAAATTTATCAAAGAACTGAGAGTGAT...AATTCTGGGTTTAAGCTTGTGTCCTATACTCTTAGTAAAGTTCTTTGTCACTCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000401931.1 |
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| CDS CCA 72 bp | CGGCCAGCTTGGAAGTCATGTTTACACACAGTGAGATaGTTCCTTCCGGTGGTTTCTTCCTGGCTCTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: RPAWKSCLHTVR*FLPVVSSWLLS Trigger: GGACAAGAGCCAGGAAGAAACCACCGGAAGGAACCATCTCACTGTGTGTAAACATGACTTCCAAGCTGGCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000307407.8 ENST00000401931.1 ENST00000483500.1 |
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| CDS TCA 72 bp | GCTCTTGTCCTAGAAGCTTGTGTGCTCTGCTGTCTCTaGAAGTTTGTGCCTTATGGAGTGCTCCGGTGGCTT | + |
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Preference number: 6 (lower is better) Translates to: ALVLEACVLCCL*KFVPYGVLRWL Trigger: AAGCCACCGGAGCACTCCATAAGGCACAAACTTTCAGAGACAGCAGAGCACACAAGCTTCTAGGACAAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000401931.1 |
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| CDS CAA 90 bp | GATGGTTCCTTCCGGTGGTTTCTTCCTGGCTCTTGTCCTAGAAGCTaGTGTGCTCTGCTGTCTCTGAAAGTTTGTGCCTTATGGAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: DGSFRWFLPGSCPRS*CALLSLKVCALWSA Trigger: AGCACTCCATAAGGCACAAACTTTCAGAGACAGCAGAGCACACAAGCTTCTAGGACAAGAGCCAGGAAGAAACCACCGGAAGGAACCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000401931.1 |
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| CDS CCA 72 bp | AAAACTTCTCCACAACCCTCTGCACCCAGTTTTCCTTaGGGTCCAGACAGAGCTCTCTTCCATCAGAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: KTSPQPSAPSFP*GPDRALFHQKA Trigger: AGCTTTCTGATGGAAGAGAGCTCTGTCTGGACCCCAAGGAAAACTGGGTGCAGAGGGTTGTGGAGAAGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000307407.8 ENST00000401931.1 |
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