Pregenerated sensors for CXCL13 (Homo sapiens)
Ensembl gene IDs: ENSG00000156234Ensembl transcript IDs: ENST00000286758.4, ENST00000506590.1, ENST00000682537.1
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGTAGTGAGTTTTTAAGCAGAGGATATCTACTACATGGATTCCTTTaGCTCTTGACAGGCTCAAGTTCCATCTGCCTCCCAGGCAGCTTT | + |
|
Preference number: 1 (lower is better) Translates to: RSEFLSRGYLLHGFL*LLTGSSSICLPGSF Trigger: AAAGCTGCCTGGGAGGCAGATGGAACTTGAGCCTGTCAAGAGGCAAAGGAATCCATGTAGTAGATATCCTCTGCTTAAAAACTCACTACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000286758.4 |
||
| 3UTR TCA 90 bp | TGTGTGAAAGGATACATGTGTACATCACCCTTTAAATGCTTTCCCTaGGTATTCTATGAAGTCTGGGGATCTTCGAATGCTATTAATCTT | + |
|
Preference number: 1 (lower is better) Translates to: CVKGYMCTSPFKCFP*VFYEVWGSSNAINL Trigger: AAGATTAATAGCATTCGAAGATCCCCAGACTTCATAGAATACTCAGGGAAAGCATTTAAAGGGTGATGTACACATGTATCCTTTCACACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000286758.4 |
||
| 3UTR-3UTR TCA 90 bp | TTCCTTTGCCTCTTGACAGGCTCAAGTTCCATCTGCCTCCCAGGCAGCTTTTTGGTATATAGGGTGCTGTaGGTGAAGAAGCTTGAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: FLCLLTGSSSICLPGSFLVYRVL*VKKLEF Trigger: AAACTCAAGCTTCTTCACTCACAGCACCCTATATAC...CAAAAAGCTGCCTGGGAGGCAGATGGAACTTGAGCCTGTCAAGAGGCAAAGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000286758.4 |
||
| 3UTR-3UTR GCA 90 bp | ATTCTCCTCCGTAGTGAGTTTTTAAGCAGAGGATATCTACTACATGGATTCCTTGGCTCAAGTTCCATCTaGCTCCCAGGCAGCTTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: ILLRSEFLSRGYLLHGFLGSSSI*LPGSFL Trigger: CAAAAAGCTGCCTGGGAGGCAGATGGAACTTGAGCC...AAGGAATCCATGTAGTAGATATCCTCTGCTTAAAAACTCACTACGGAGGAGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000286758.4 |
||
| 3UTR-3UTR TCA 90 bp | AATGCTTTCCCTGAGTATTCTATGAAGTCTGGGGATCTTCGAATGCTATTAATCCCACATGTTCAAATTTaGGGCTTAAATTCTCATTCC | + |
|
Preference number: 2 (lower is better) Translates to: NAFPEYSMKSGDLRMLLIPHVQI*GLNSHS Trigger: GGAATGAGAATTTAAGCCTCAAATTTGAACATGTGG...GATTAATAGCATTCGAAGATCCCCAGACTTCATAGAATACTCAGGGAAAGCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000286758.4 |
||
| 3UTR GCA 72 bp | TTTTTAAGCAGAGGATATCTACTACATGGATTCCTTTaGCTCTTGACAGGCTCAAGTTCCATCTGCCTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: FLSRGYLLHGFL*LLTGSSSICLP Trigger: TGGGAGGCAGATGGAACTTGAGCCTGTCAAGAGGCAAAGGAATCCATGTAGTAGATATCCTCTGCTTAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000286758.4 |
||
| 3UTR TCA 72 bp | GGATACATGTGTACATCACCCTTTAAATGCTTTCCCTaGGTATTCTATGAAGTCTGGGGATCTTCGAATGCT | + |
|
Preference number: 3 (lower is better) Translates to: GYMCTSPFKCFP*VFYEVWGSSNA Trigger: AGCATTCGAAGATCCCCAGACTTCATAGAATACTCAGGGAAAGCATTTAAAGGGTGATGTACACATGTATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000286758.4 |
||
| CDS-3UTR TCA 90 bp | TTCCTTTGCCTCTTGACAGGCTCAAGTTCCATCTGCCTCCCAGGCAGCTTTTTGTCTAGGGATAAAGACTaGGCTCTCTTGGACACATCT | + |
|
Preference number: 4 (lower is better) Translates to: FLCLLTGSSSICLPGSFLSRDKD*ALLDTS Trigger: AGATGTGTCCAAGAGAGCTCAGTCTTTATCCCTAGA...CAAAAAGCTGCCTGGGAGGCAGATGGAACTTGAGCCTGTCAAGAGGCAAAGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000286758.4 |
||
| CDS-3UTR TCA 90 bp | CTCCGTAGTGAGTTTTTAAGCAGAGGATATCTACTACATGGATTCCTTTGCCTCGGTAGAGTTCAGACTTaGGCTCTGAGTCCAGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LRSEFLSRGYLLHGFLCLGRVQT*ALSPGS Trigger: TGAGCCTGGACTCAGAGCTCAAGTCTGAACTCTACC...GAGGCAAAGGAATCCATGTAGTAGATATCCTCTGCTTAAAAACTCACTACGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000286758.4 |
||
| CDS-3UTR CCA 90 bp | AATGCTTTCCCTGAGTATTCTATGAAGTCTGGGGATCTTCGAATGCTATTAATCCAGAACACCTTGGACTaGAGAGAGGCTGCTGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: NAFPEYSMKSGDLRMLLIQNTLD*REAADQ Trigger: CTGGTCAGCAGCCTCTCTCCAGTCCAAGGTGTTCTG...GATTAATAGCATTCGAAGATCCCCAGACTTCATAGAATACTCAGGGAAAGCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000286758.4 |
||
| CDS-3UTR CCA 90 bp | AATGCTTTCCCTGAGTATTCTATGAAGTCTGGGGATCTTCGAATGCTATTAATCACCTCCAGAACACCTTaGACTGGAGAGAGGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NAFPEYSMKSGDLRMLLITSRTP*TGERLL Trigger: CAGCAGCCTCTCTCCAGTCCAAGGTGTTCTGGAGGT...GATTAATAGCATTCGAAGATCCCCAGACTTCATAGAATACTCAGGGAAAGCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000286758.4 |
||
| CDS-3UTR GCA 90 bp | AGTTTGCCCCATCAGCTTCTGCAAGGTTATTTTTACATAGTCTCATGCTTATTTGGCTCAAGTTCCATCTaGCTCCCAGGCAGCTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLPHQLLQGYFYIVSCLFGSSSI*LPGSFL Trigger: CAAAAAGCTGCCTGGGAGGCAGATGGAACTTGAGCC...AAATAAGCATGAGACTATGTAAAAATAACCTTGCAGAAGCTGATGGGGCAAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000286758.4 |
||
| CDS-3UTR TCA 90 bp | AATGCTTTCCCTGAGTATTCTATGAAGTCTGGGGATCTTCGAATGCTATTAATCGCAGAGATGTCGAGATaGACTTCATTCTGTCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NAFPEYSMKSGDLRMLLIAEMSR*TSFCLE Trigger: CTCCAGACAGAATGAAGTTCATCTCGACATCTCTGC...GATTAATAGCATTCGAAGATCCCCAGACTTCATAGAATACTCAGGGAAAGCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000286758.4 |
||
| CDS-3UTR TCA 90 bp | CCTTTAAATGCTTTCCCTGAGTATTCTATGAAGTCTGGGGATCTTCGAATGCTATGTATCCATTCAGCTTaGGGGTCCACACACACAATT | + |
|
Preference number: 4 (lower is better) Translates to: PLNAFPEYSMKSGDLRMLCIHSA*GSTHTI Trigger: AATTGTGTGTGTGGACCCTCAAGCTGAATGGATACA...TAGCATTCGAAGATCCCCAGACTTCATAGAATACTCAGGGAAAGCATTTAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000286758.4 |
||
| CDS-3UTR GCA 90 bp | CCTTTAAATGCTTTCCCTGAGTATTCTATGAAGTCTGGGGATCTTCGAATGCTACTACATGGATTCCTTTaGCTCTTGACAGGCTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PLNAFPEYSMKSGDLRMLLHGFL*LLTGSS Trigger: ACTTGAGCCTGTCAAGAGGCAAAGGAATCCATGTAG...TAGCATTCGAAGATCCCCAGACTTCATAGAATACTCAGGGAAAGCATTTAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000286758.4 |
||
| CDS-3UTR CCA 90 bp | CCTTTAAATGCTTTCCCTGAGTATTCTATGAAGTCTGGGGATCTTCGAATGCTAAAGACTGAGCTCTCTTaGACACATCTACACCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PLNAFPEYSMKSGDLRMLKTELS*THLHLK Trigger: CTTGAGGTGTAGATGTGTCCAAGAGAGCTCAGTCTT...TAGCATTCGAAGATCCCCAGACTTCATAGAATACTCAGGGAAAGCATTTAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000286758.4 |
||
| CDS-3UTR TCA 90 bp | AGTTTGCCCCATCAGCTTCTGCAAGGTTATTTTTACATAGTCTCATGCTTATTTCCACGGGGCAAGATTTaGATTCGATCAATGAAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: SLPHQLLQGYFYIVSCLFPRGKI*IRSMKR Trigger: ACGCTTCATTGATCGAATTCAAATCTTGCCCCGTGG...AAATAAGCATGAGACTATGTAAAAATAACCTTGCAGAAGCTGATGGGGCAAACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000286758.4 |
||
| CDS-3UTR TCA 90 bp | CCTTTAAATGCTTTCCCTGAGTATTCTATGAAGTCTGGGGATCTTCGAATGCTAGTATATAGGGTGCTGTaGGTGAAGAAGCTTGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PLNAFPEYSMKSGDLRMLVYRVL*VKKLEF Trigger: AAACTCAAGCTTCTTCACTCACAGCACCCTATATAC...TAGCATTCGAAGATCCCCAGACTTCATAGAATACTCAGGGAAAGCATTTAAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000286758.4 |
||
| CDS-3UTR TCA 90 bp | AATGCTTTCCCTGAGTATTCTATGAAGTCTGGGGATCTTCGAATGCTATTAATCTCCCTGAGTATTCTATaGAGTCTGGGGATCTTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: NAFPEYSMKSGDLRMLLISLSIL*SLGIFE Trigger: TTCGAAGATCCCCAGACTTCATAGAATACTCAGGGA...GATTAATAGCATTCGAAGATCCCCAGACTTCATAGAATACTCAGGGAAAGCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000286758.4 |
||
| CDS-3UTR TCA 90 bp | CTCCGTAGTGAGTTTTTAAGCAGAGGATATCTACTACATGGATTCCTTTGCCTCTTTAAATGCTTTCCCTaGGTATTCTATGAAGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LRSEFLSRGYLLHGFLCLFKCFP*VFYEVW Trigger: CCAGACTTCATAGAATACTCAGGGAAAGCATTTAAA...GAGGCAAAGGAATCCATGTAGTAGATATCCTCTGCTTAAAAACTCACTACGGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000286758.4 |
||
| CDS-3UTR TCA 90 bp | CCTTTAAATGCTTTCCCTGAGTATTCTATGAAGTCTGGGGATCTTCGAATGCTACCACATGTTCAAATTTaGGGCTTAAATTCTCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLNAFPEYSMKSGDLRMLPHVQI*GLNSHS Trigger: GGAATGAGAATTTAAGCCTCAAATTTGAACATGTGG...TAGCATTCGAAGATCCCCAGACTTCATAGAATACTCAGGGAAAGCATTTAAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000286758.4 |
||
| CDS-3UTR TCA 90 bp | AATGCTTTCCCTGAGTATTCTATGAAGTCTGGGGATCTTCGAATGCTATTAATCGTCAAGGCAAATGTGTaGAAGGATACATGTGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: NAFPEYSMKSGDLRMLLIVKANV*KDTCVH Trigger: ATGTACACATGTATCCTTTCACACATTTGCCTTGAC...GATTAATAGCATTCGAAGATCCCCAGACTTCATAGAATACTCAGGGAAAGCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000286758.4 |
||
| CDS-3UTR CCA 90 bp | AATGCTTTCCCTGAGTATTCTATGAAGTCTGGGGATCTTCGAATGCTATTAATCGTATTCTATGAAGTCTaGGGATCTTCGAATGCTATT | + |
|
Preference number: 4 (lower is better) Translates to: NAFPEYSMKSGDLRMLLIVFYEV*GSSNAI Trigger: AATAGCATTCGAAGATCCCCAGACTTCATAGAATAC...GATTAATAGCATTCGAAGATCCCCAGACTTCATAGAATACTCAGGGAAAGCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000286758.4 |
||
| CDS-3UTR CAA 90 bp | TTCCTTTGCCTCTTGACAGGCTCAAGTTCCATCTGCCTCCCAGGCAGCTTTTTGACTACATGGATTCCTTaGCCTCTTGACAGGCTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: FLCLLTGSSSICLPGSFLTTWIP*PLDRLK Trigger: CTTGAGCCTGTCAAGAGGCAAAGGAATCCATGTAGT...CAAAAAGCTGCCTGGGAGGCAGATGGAACTTGAGCCTGTCAAGAGGCAAAGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000286758.4 |
||
| CDS-3UTR CAA 90 bp | CTCCGTAGTGAGTTTTTAAGCAGAGGATATCTACTACATGGATTCCTTTGCCTCGACCTCCAGAACACCTaGGACTGGAGAGAGGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LRSEFLSRGYLLHGFLCLDLQNT*DWREAA Trigger: AGCAGCCTCTCTCCAGTCCAAGGTGTTCTGGAGGTC...GAGGCAAAGGAATCCATGTAGTAGATATCCTCTGCTTAAAAACTCACTACGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000286758.4 |
||
| CDS TCA 90 bp | GGGCAAGATTTGAATTCGATCAATGAAGCGTCTAGGGATAAAGACTaGGCTCTCTTGGACACATCTACACCTCAAGCTTGTGTAATAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GQDLNSINEASRDKD*ALLDTSTPQACVID Trigger: GTCTATTACACAAGCTTGAGGTGTAGATGTGTCCAAGAGAGCTCAGTCTTTATCCCTAGACGCTTCATTGATCGAATTCAAATCTTGCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000286758.4 ENST00000506590.1 ENST00000682537.1 |
||
| CDS-3UTR CAA 90 bp | ATTCTCCTCCGTAGTGAGTTTTTAAGCAGAGGATATCTACTACATGGATTCCTTCCCACGGGGCAAGATTaGAATTCGATCAATGAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: ILLRSEFLSRGYLLHGFLPTGQD*NSINEA Trigger: CGCTTCATTGATCGAATTCAAATCTTGCCCCGTGGG...AAGGAATCCATGTAGTAGATATCCTCTGCTTAAAAACTCACTACGGAGGAGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000286758.4 |
||
| CDS-3UTR CAA 90 bp | ATTCTCCTCCGTAGTGAGTTTTTAAGCAGAGGATATCTACTACATGGATTCCTTGGATTCCTTTGCCTCTaGACAGGCTCAAGTTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: ILLRSEFLSRGYLLHGFLGFLCL*TGSSSI Trigger: GATGGAACTTGAGCCTGTCAAGAGGCAAAGGAATCC...AAGGAATCCATGTAGTAGATATCCTCTGCTTAAAAACTCACTACGGAGGAGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000286758.4 |
||
| CDS TCA 90 bp | ACTATGATTTCTTTTCTTGGACAACCATTCCCACGGGGCAAGATTTaGATTCGATCAATGAAGCGTCTAGGGATAAAGACTGAGCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TMISFLGQPFPRGKI*IRSMKRLGIKTELS Trigger: AGAGAGCTCAGTCTTTATCCCTAGACGCTTCATTGATCGAATTCAAATCTTGCCCCGTGGGAATGGTTGTCCAAGAAAAGAAATCATAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000286758.4 ENST00000506590.1 ENST00000682537.1 |
||
| CDS TCA 90 bp | TTTGACTGCCCAGGAAAGGGAAACTCTTCAGTACAAGTTGGAATCTaGAACCCCTTGTTATGCCTAACTTACTTTCTCAATACTTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: FDCPGKGNSSVQVGI*NPLLCLTYFLNTSI Trigger: GATGGAAGTATTGAGAAAGTAAGTTAGGCATAACAAGGGGTTTCAGATTCCAACTTGTACTGAAGAGTTTCCCTTTCCTGGGCAGTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506590.1 |
||
| CDS-3UTR CAA 90 bp | CCTTTAAATGCTTTCCCTGAGTATTCTATGAAGTCTGGGGATCTTCGAATGCTAATCTACACCTCAAGCTaGTGTAATAGACCTCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PLNAFPEYSMKSGDLRMLIYTSS*CNRPPE Trigger: TTCTGGAGGTCTATTACACAAGCTTGAGGTGTAGAT...TAGCATTCGAAGATCCCCAGACTTCATAGAATACTCAGGGAAAGCATTTAAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000286758.4 |
||
| CDS-3UTR CAA 90 bp | ATTCTCCTCCGTAGTGAGTTTTTAAGCAGAGGATATCTACTACATGGATTCCTTTTGTATCCATTCAGCTaGAGGGTCCACACACACAAT | + |
|
Preference number: 5 (lower is better) Translates to: ILLRSEFLSRGYLLHGFLLYPFS*RVHTHN Trigger: ATTGTGTGTGTGGACCCTCAAGCTGAATGGATACAA...AAGGAATCCATGTAGTAGATATCCTCTGCTTAAAAACTCACTACGGAGGAGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000286758.4 |
||
| CDS-3UTR CAA 90 bp | CTCCGTAGTGAGTTTTTAAGCAGAGGATATCTACTACATGGATTCCTTTGCCTCTACTTCCATCATTCTTaGTATCCATTCAGCTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LRSEFLSRGYLLHGFLCLYFHHS*YPFSLR Trigger: CCTCAAGCTGAATGGATACAAAGAATGATGGAAGTA...GAGGCAAAGGAATCCATGTAGTAGATATCCTCTGCTTAAAAACTCACTACGGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000286758.4 |
||
| CDS-3UTR CAA 90 bp | AATGCTTTCCCTGAGTATTCTATGAAGTCTGGGGATCTTCGAATGCTATTAATCGTGAGTGAAAGAAGTTaGTCAAGGCAAATGTGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: NAFPEYSMKSGDLRMLLIVSERS*SRQMCE Trigger: TTCACACATTTGCCTTGACAAACTTCTTTCACTCAC...GATTAATAGCATTCGAAGATCCCCAGACTTCATAGAATACTCAGGGAAAGCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000286758.4 |
||
| CDS CAA 72 bp | AGACTGAGCTCTCTTGGACACATCTACACCTCAAGCTaGTGTAATAGACCTCCAGAACACCTTGGACTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RLSSLGHIYTSS*CNRPPEHLGLE Trigger: CTCCAGTCCAAGGTGTTCTGGAGGTCTATTACACAAGCTTGAGGTGTAGATGTGTCCAAGAGAGCTCAGTCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000286758.4 ENST00000506590.1 ENST00000682537.1 |
||
| CDS TCA 72 bp | TTGAATTCGATCAATGAAGCGTCTAGGGATAAAGACTaGGCTCTCTTGGACACATCTACACCTCAAGCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LNSINEASRDKD*ALLDTSTPQAC Trigger: ACAAGCTTGAGGTGTAGATGTGTCCAAGAGAGCTCAGTCTTTATCCCTAGACGCTTCATTGATCGAATTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000286758.4 ENST00000506590.1 ENST00000682537.1 |
||
| CDS TCA 72 bp | TCTTTTCTTGGACAACCATTCCCACGGGGCAAGATTTaGATTCGATCAATGAAGCGTCTAGGGATAAAGACT | + |
|
Preference number: 6 (lower is better) Translates to: SFLGQPFPRGKI*IRSMKRLGIKT Trigger: AGTCTTTATCCCTAGACGCTTCATTGATCGAATTCAAATCTTGCCCCGTGGGAATGGTTGTCCAAGAAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000286758.4 ENST00000506590.1 ENST00000682537.1 |
||
| CDS CAA 72 bp | TTCTTTTCTTGGACAACCATTCCCACGGGGCAAGATTaGAATTCGATCAATGAAGCGTCTAGGGATAAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: FFSWTTIPTGQD*NSINEASRDKD Trigger: GTCTTTATCCCTAGACGCTTCATTGATCGAATTCAAATCTTGCCCCGTGGGAATGGTTGTCCAAGAAAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000286758.4 ENST00000506590.1 ENST00000682537.1 |
||
| CDS CAA 72 bp | TTAGGAACTTCTCATAAATTCAAGCTAGTCCCTATTTaGACTGCCCAGGAAAGGGAAACTCTTCAGTACAAG | + |
|
Preference number: 6 (lower is better) Translates to: LGTSHKFKLVPI*TAQERETLQYK Trigger: CTTGTACTGAAGAGTTTCCCTTTCCTGGGCAGTCAAAATAGGGACTAGCTTGAATTTATGAGAAGTTCCTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506590.1 |
||
| CDS CAA 90 bp | ACATTTGTCTTAGGAACTTCTCATAAATTCAAGCTAGTCCCTATTTaGACTGCCCAGGAAAGGGAAACTCTTCAGTACAAGTTGGAATCT | + |
|
Preference number: 6 (lower is better) Translates to: TFVLGTSHKFKLVPI*TAQERETLQYKLES Trigger: AGATTCCAACTTGTACTGAAGAGTTTCCCTTTCCTGGGCAGTCAAAATAGGGACTAGCTTGAATTTATGAGAAGTTCCTAAGACAAATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506590.1 |
||