Pregenerated sensors for CXCL11 (Homo sapiens)
Ensembl gene IDs: ENSG00000169248Ensembl transcript IDs: ENST00000306621.8, ENST00000503860.1
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CAATACAGACAGATGACTTCTAGAGACAGAAATGTTCTCATAGTCACAACAGAATCTAGGTTTTTCAGATaGTCTTTTCCAGGACTTCAT | + |
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Preference number: 2 (lower is better) Translates to: QYRQMTSRDRNVLIVTTESRFFR*SFPGLH Trigger: ATGAAGTCCTGGAAAAGAGCATCTGAAAAACCTAGA...TTCTGTTGTGACTATGAGAACATTTCTGTCTCTAGAAGTCATCTGTCTGTATTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000306621.8 |
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| CDS-3UTR GCA 90 bp | CAATACAGACAGATGACTTCTAGAGACAGAAATGTTCTCATAGTCACAACAGAATGCTGGTGCTGCTGCTaGTACTTCAGCTTTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: QYRQMTSRDRNVLIVTTECWCCC*YFSFAA Trigger: AGCAGCAAAGCTGAAGTAGCAGCAGCAGCACCAGCA...TTCTGTTGTGACTATGAGAACATTTCTGTCTCTAGAAGTCATCTGTCTGTATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306621.8 |
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| CDS-3UTR GCA 90 bp | CAATACAGACAGATGACTTCTAGAGACAGAAATGTTCTCATAGTCACAACAGAATGCTGCTGGTGCTGCTaGTGCTACTTCAGCTTTGCT | + |
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Preference number: 4 (lower is better) Translates to: QYRQMTSRDRNVLIVTTECCWCC*CYFSFA Trigger: AGCAAAGCTGAAGTAGCAGCAGCAGCACCAGCAGCA...TTCTGTTGTGACTATGAGAACATTTCTGTCTCTAGAAGTCATCTGTCTGTATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306621.8 |
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| CDS-3UTR TCA 90 bp | CAATACAGACAGATGACTTCTAGAGACAGAAATGTTCTCATAGTCACAACAGAAGACAGCGTCCTCTTTTaGACATGGGGAAGCCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: QYRQMTSRDRNVLIVTTEDSVLF*TWGSLE Trigger: TTCAAGGCTTCCCCATGTTCAAAAGAGGACGCTGTC...TTCTGTTGTGACTATGAGAACATTTCTGTCTCTAGAAGTCATCTGTCTGTATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306621.8 |
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| CDS-3UTR GCA 90 bp | CAATACAGACAGATGACTTCTAGAGACAGAAATGTTCTCATAGTCACAACAGAATGTTGCTGCTGGTGCTaGTGCTGCTACTTCAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: QYRQMTSRDRNVLIVTTECCCWC*CCYFSF Trigger: AAAGCTGAAGTAGCAGCAGCAGCACCAGCAGCAACA...TTCTGTTGTGACTATGAGAACATTTCTGTCTCTAGAAGTCATCTGTCTGTATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306621.8 |
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| CDS-3UTR GCA 90 bp | CAATACAGACAGATGACTTCTAGAGACAGAAATGTTCTCATAGTCACAACAGAAATCTGCCACTTTCACTaGTTTTACCCCAGGGCCTAT | + |
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Preference number: 4 (lower is better) Translates to: QYRQMTSRDRNVLIVTTEICHFH*FYPRAY Trigger: ATAGGCCCTGGGGTAAAAGCAGTGAAAGTGGCAGAT...TTCTGTTGTGACTATGAGAACATTTCTGTCTCTAGAAGTCATCTGTCTGTATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306621.8 |
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| CDS-3UTR GCA 90 bp | AGAATAGTTGTAAGCATCAAATCTAGAAGGTTCTCTAGCCTAGAAATGCATGAACTGCTACTTCAGCTTTaGTGCTCTTCTTGGAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: RIVVSIKSRRFSSLEMHELLLQL*CSSWKE Trigger: CTCCTTCCAAGAAGAGCAGCAAAGCTGAAGTAGCAG...TTCATGCATTTCTAGGCTAGAGAACCTTCTAGATTTGATGCTTACAACTATTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306621.8 |
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| CDS-3UTR TCA 90 bp | AGAATAGTTGTAAGCATCAAATCTAGAAGGTTCTCTAGCCTAGAAATGCATGAAAACATGGGGAAGCCTTaGACAACTGTAGCACACAAT | + |
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Preference number: 4 (lower is better) Translates to: RIVVSIKSRRFSSLEMHENMGKP*TTVAHN Trigger: ATTGTGTGCTACAGTTGTTCAAGGCTTCCCCATGTT...TTCATGCATTTCTAGGCTAGAGAACCTTCTAGATTTGATGCTTACAACTATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306621.8 |
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| CDS-3UTR GCA 90 bp | CAATACAGACAGATGACTTCTAGAGACAGAAATGTTCTCATAGTCACAACAGAACCCTACATATTGATGTaGTACATGATGTTTGGGGAA | + |
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Preference number: 4 (lower is better) Translates to: QYRQMTSRDRNVLIVTTEPYILM*YMMFGE Trigger: TTCCCCAAACATCATGTAGCACATCAATATGTAGGG...TTCTGTTGTGACTATGAGAACATTTCTGTCTCTAGAAGTCATCTGTCTGTATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306621.8 |
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| CDS-3UTR CCA 90 bp | AGAATAGTTGTAAGCATCAAATCTAGAAGGTTCTCTAGCCTAGAAATGCATGAATTGCTTGCTTCGATTTaGGATTTAGGCATCGTTGTC | + |
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Preference number: 4 (lower is better) Translates to: RIVVSIKSRRFSSLEMHELLASI*DLGIVV Trigger: GACAACGATGCCTAAATCCCAAATCGAAGCAAGCAA...TTCATGCATTTCTAGGCTAGAGAACCTTCTAGATTTGATGCTTACAACTATTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306621.8 |
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| CDS-3UTR GCA 90 bp | AGAATAGTTGTAAGCATCAAATCTAGAAGGTTCTCTAGCCTAGAAATGCATGAAGGCTTTCTCAATATCTaGCACTTTCACTGCTTTTAC | + |
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Preference number: 4 (lower is better) Translates to: RIVVSIKSRRFSSLEMHEGFLNI*HFHCFY Trigger: GTAAAAGCAGTGAAAGTGGCAGATATTGAGAAAGCC...TTCATGCATTTCTAGGCTAGAGAACCTTCTAGATTTGATGCTTACAACTATTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306621.8 |
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| CDS-3UTR GCA 90 bp | CAATACAGACAGATGACTTCTAGAGACAGAAATGTTCTCATAGTCACAACAGAAAAATATGTGCACTTTTaGCAGTATCCCATAGCGTAT | + |
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Preference number: 4 (lower is better) Translates to: QYRQMTSRDRNVLIVTTEKYVHF*QYPIAY Trigger: ATACGCTATGGGATACTGGCAAAAGTGCACATATTT...TTCTGTTGTGACTATGAGAACATTTCTGTCTCTAGAAGTCATCTGTCTGTATTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000306621.8 |
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| CDS-3UTR CCA 90 bp | CAATACAGACAGATGACTTCTAGAGACAGAAATGTTCTCATAGTCACAACAGAATACTTGGGTACATTATaGAGGCTTTCTCAATATCTG | + |
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Preference number: 4 (lower is better) Translates to: QYRQMTSRDRNVLIVTTEYLGTL*RLSQYL Trigger: CAGATATTGAGAAAGCCTCCATAATGTACCCAAGTA...TTCTGTTGTGACTATGAGAACATTTCTGTCTCTAGAAGTCATCTGTCTGTATTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306621.8 |
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| CDS-3UTR CCA 90 bp | AGAATAGTTGTAAGCATCAAATCTAGAAGGTTCTCTAGCCTAGAAATGCATGAAGTCACAGTTGTTACTTaGGTACATTATGGAGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: RIVVSIKSRRFSSLEMHEVTVVT*VHYGGF Trigger: AAAGCCTCCATAATGTACCCAAGTAACAACTGTGAC...TTCATGCATTTCTAGGCTAGAGAACCTTCTAGATTTGATGCTTACAACTATTCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306621.8 |
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| CDS-3UTR GCA 90 bp | AGAATAGTTGTAAGCATCAAATCTAGAAGGTTCTCTAGCCTAGAAATGCATGAAATTATAAGCCTTGCTTaGTTCGATTTGGGATTTAGG | + |
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Preference number: 4 (lower is better) Translates to: RIVVSIKSRRFSSLEMHEIISLA*FDLGFR Trigger: CCTAAATCCCAAATCGAAGCAAGCAAGGCTTATAAT...TTCATGCATTTCTAGGCTAGAGAACCTTCTAGATTTGATGCTTACAACTATTCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306621.8 |
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| CDS-3UTR GCA 90 bp | CAATACAGACAGATGACTTCTAGAGACAGAAATGTTCTCATAGTCACAACAGAATTTGATTATAAGCCTTaGTTGCTTCGATTTGGGATT | + |
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Preference number: 4 (lower is better) Translates to: QYRQMTSRDRNVLIVTTEFDYKP*LLRFGI Trigger: AATCCCAAATCGAAGCAAGCAAGGCTTATAATCAAA...TTCTGTTGTGACTATGAGAACATTTCTGTCTCTAGAAGTCATCTGTCTGTATTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306621.8 |
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| CDS TCA 90 bp | TGCTGGCTTTGTAGATGTGTGGGGTCAGACGTGTCTTCAGGATTGTaGCTTGTTCTGGCTCTATACTCTCTGACATCACATGAGGAAGAT | + |
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Preference number: 5 (lower is better) Translates to: CWLCRCVGSDVSSGL*LVLALYSLTSHEED Trigger: ATCTTCCTCATGTGATGTCAGAGAGTATAGAGCCAGAACAAGTCACAATCCTGAAGACACGTCTGACCCCACACATCTACAAAGCCAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503860.1 |
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| CDS TCA 90 bp | TTCAGGATTGTGACTTGTTCTGGCTCTATACTCTCTGACATCACATaGGGAAGATTACCTTCTTTCACAGCATCCCCTCATCTGGTGAGC | + |
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Preference number: 5 (lower is better) Translates to: FRIVTCSGSILSDIT*GRLPSFTASPHLVS Trigger: GCTCACCAGATGAGGGGATGCTGTGAAAGAAGGTAATCTTCCTCATGTGATGTCAGAGAGTATAGAGCCAGAACAAGTCACAATCCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503860.1 |
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| CDS TCA 90 bp | CAGACGTGTCTTCAGGATTGTGACTTGTTCTGGCTCTATACTCTCTaGCATCACATGAGGAAGATTACCTTCTTTCACAGCATCCCCTCA | + |
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Preference number: 5 (lower is better) Translates to: QTCLQDCDLFWLYTL*HHMRKITFFHSIPS Trigger: TGAGGGGATGCTGTGAAAGAAGGTAATCTTCCTCATGTGATGTCAGAGAGTATAGAGCCAGAACAAGTCACAATCCTGAAGACACGTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503860.1 |
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| CDS GCA 90 bp | TTTCAAACTTTCTGCCTTATTGTAGAAGTTAGTCTGCCTGATTTCTaGTGGCTTTGTAGATGTGTGGGGTCAGACGTGTCTTCAGGATTG | + |
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Preference number: 5 (lower is better) Translates to: FQTFCLIVEVSLPDF*WLCRCVGSDVSSGL Trigger: CAATCCTGAAGACACGTCTGACCCCACACATCTACAAAGCCAGCAGAAATCAGGCAGACTAACTTCTACAATAAGGCAGAAAGTTTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503860.1 |
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| CDS-3UTR CAA 90 bp | CAATACAGACAGATGACTTCTAGAGACAGAAATGTTCTCATAGTCACAACAGAAGCTGCTACTTCAGCTTaGCTGCTCTTCTTGGAAGGA | + |
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Preference number: 5 (lower is better) Translates to: QYRQMTSRDRNVLIVTTEAATSA*LLFLEG Trigger: TCCTTCCAAGAAGAGCAGCAAAGCTGAAGTAGCAGC...TTCTGTTGTGACTATGAGAACATTTCTGTCTCTAGAAGTCATCTGTCTGTATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306621.8 |
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| CDS-3UTR CAA 90 bp | CAATACAGACAGATGACTTCTAGAGACAGAAATGTTCTCATAGTCACAACAGAAGCTTTGCTGCTCTTCTaGGAAGGAGTAGAAATGCTG | + |
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Preference number: 5 (lower is better) Translates to: QYRQMTSRDRNVLIVTTEALLLF*EGVEML Trigger: CAGCATTTCTACTCCTTCCAAGAAGAGCAGCAAAGC...TTCTGTTGTGACTATGAGAACATTTCTGTCTCTAGAAGTCATCTGTCTGTATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306621.8 |
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| CDS GCA 90 bp | GTAGAAATGCAAGTCCTTTCCGTGTGTTCCAAATTTCAAACTTTCTaGCTTATTGTAGAAGTTAGTCTGCCTGATTTCTGCTGGCTTTGT | + |
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Preference number: 5 (lower is better) Translates to: VEMQVLSVCSKFQTF*LIVEVSLPDFCWLC Trigger: ACAAAGCCAGCAGAAATCAGGCAGACTAACTTCTACAATAAGGCAGAAAGTTTGAAATTTGGAACACACGGAAAGGACTTGCATTTCTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503860.1 |
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| CDS-3UTR CAA 90 bp | CAATACAGACAGATGACTTCTAGAGACAGAAATGTTCTCATAGTCACAACAGAAACTCATGTTTGTTTTTaGCTGTTGCTGCTGGTGCTG | + |
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Preference number: 5 (lower is better) Translates to: QYRQMTSRDRNVLIVTTETHVCF*LLLLVL Trigger: CAGCACCAGCAGCAACAGCAAAAAACAAACATGAGT...TTCTGTTGTGACTATGAGAACATTTCTGTCTCTAGAAGTCATCTGTCTGTATTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000306621.8 |
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| CDS-3UTR CAA 90 bp | AGAATAGTTGTAAGCATCAAATCTAGAAGGTTCTCTAGCCTAGAAATGCATGAAGAACATGGGGAAGCCTaGAACAACTGTAGCACACAA | + |
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Preference number: 5 (lower is better) Translates to: RIVVSIKSRRFSSLEMHEEHGEA*NNCSTQ Trigger: TTGTGTGCTACAGTTGTTCAAGGCTTCCCCATGTTC...TTCATGCATTTCTAGGCTAGAGAACCTTCTAGATTTGATGCTTACAACTATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306621.8 |
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| CDS-3UTR CAA 90 bp | AGAATAGTTGTAAGCATCAAATCTAGAAGGTTCTCTAGCCTAGAAATGCATGAACTTGCTTGCTTCGATTaGGGATTTAGGCATCGTTGT | + |
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Preference number: 5 (lower is better) Translates to: RIVVSIKSRRFSSLEMHELACFD*GFRHRC Trigger: ACAACGATGCCTAAATCCCAAATCGAAGCAAGCAAG...TTCATGCATTTCTAGGCTAGAGAACCTTCTAGATTTGATGCTTACAACTATTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306621.8 |
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| CDS CCA 90 bp | TTCTTTCAGGGTAATAATCACTTCTATTTTGTCACAGTTGTTACTTaGGTACATTATGGAGGCTTTCTCAATATCTGCCACTTTCACTGC | + |
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Preference number: 5 (lower is better) Translates to: FFQGNNHFYFVTVVT*VHYGGFLNICHFHC Trigger: GCAGTGAAAGTGGCAGATATTGAGAAAGCCTCCATAATGTACCCAAGTAACAACTGTGACAAAATAGAAGTGATTATTACCCTGAAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000306621.8 ENST00000503860.1 |
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| CDS-3UTR CAA 90 bp | AGAATAGTTGTAAGCATCAAATCTAGAAGGTTCTCTAGCCTAGAAATGCATGAATGTCACAGTTGTTACTaGGGTACATTATGGAGGCTT | + |
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Preference number: 5 (lower is better) Translates to: RIVVSIKSRRFSSLEMHECHSCY*GTLWRL Trigger: AAGCCTCCATAATGTACCCAAGTAACAACTGTGACA...TTCATGCATTTCTAGGCTAGAGAACCTTCTAGATTTGATGCTTACAACTATTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306621.8 |
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| CDS-3UTR CAA 90 bp | AGAATAGTTGTAAGCATCAAATCTAGAAGGTTCTCTAGCCTAGAAATGCATGAAGAAATATGTGCACTTTaGCCAGTATCCCATAGCGTA | + |
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Preference number: 5 (lower is better) Translates to: RIVVSIKSRRFSSLEMHEEICAL*PVSHSV Trigger: TACGCTATGGGATACTGGCAAAAGTGCACATATTTC...TTCATGCATTTCTAGGCTAGAGAACCTTCTAGATTTGATGCTTACAACTATTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306621.8 |
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| CDS-3UTR CAA 90 bp | AGAATAGTTGTAAGCATCAAATCTAGAAGGTTCTCTAGCCTAGAAATGCATGAATTGACTTATAAGGGCTaGACTCCAGTAATAATGTCA | + |
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Preference number: 5 (lower is better) Translates to: RIVVSIKSRRFSSLEMHELTYKG*TPVIMS Trigger: TGACATTATTACTGGAGTCAAGCCCTTATAAGTCAA...TTCATGCATTTCTAGGCTAGAGAACCTTCTAGATTTGATGCTTACAACTATTCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306621.8 |
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| CDS-3UTR CAA 90 bp | AGAATAGTTGTAAGCATCAAATCTAGAAGGTTCTCTAGCCTAGAAATGCATGAAATGTCTCCCTACATATaGATGTGCTACATGATGTTT | + |
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Preference number: 5 (lower is better) Translates to: RIVVSIKSRRFSSLEMHEMSPYI*MCYMMF Trigger: AAACATCATGTAGCACATCAATATGTAGGGAGACAT...TTCATGCATTTCTAGGCTAGAGAACCTTCTAGATTTGATGCTTACAACTATTCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306621.8 |
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| CDS-3UTR CAA 90 bp | AGAATAGTTGTAAGCATCAAATCTAGAAGGTTCTCTAGCCTAGAAATGCATGAAACTGGTGCTACTAATTaGGTTATGAAATATGTGCAC | + |
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Preference number: 5 (lower is better) Translates to: RIVVSIKSRRFSSLEMHETGATN*VMKYVH Trigger: GTGCACATATTTCATAACCAAATTAGTAGCACCAGT...TTCATGCATTTCTAGGCTAGAGAACCTTCTAGATTTGATGCTTACAACTATTCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306621.8 |
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| CDS CAA 72 bp | GCTGTTGCTGCTGGTGCTGCTGCTGCTACTTCAGCTTaGCTGCTCTTCTTGGAAGGAGTAGAAATGCTGAAC | + |
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Preference number: 6 (lower is better) Translates to: AVAAGAAAATSA*LLFLEGVEMLN Trigger: GTTCAGCATTTCTACTCCTTCCAAGAAGAGCAGCAAAGCTGAAGTAGCAGCAGCAGCACCAGCAGCAACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306621.8 |
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| CDS CAA 72 bp | GCTGTTGCTGCTGGTGCTGCTGCTGCTACTTCAGCTTaGCTGCTCTTCTTGGAAGGAGTAGAAATGCAAGTC | + |
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Preference number: 6 (lower is better) Translates to: AVAAGAAAATSA*LLFLEGVEMQV Trigger: GACTTGCATTTCTACTCCTTCCAAGAAGAGCAGCAAAGCTGAAGTAGCAGCAGCAGCACCAGCAGCAACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503860.1 |
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| CDS CAA 72 bp | GGTGCTGCTGCTGCTACTTCAGCTTTGCTGCTCTTCTaGGAAGGAGTAGAAATGCAAGTCCTTTCCGTGTGT | + |
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Preference number: 6 (lower is better) Translates to: GAAAATSALLLF*EGVEMQVLSVC Trigger: ACACACGGAAAGGACTTGCATTTCTACTCCTTCCAAGAAGAGCAGCAAAGCTGAAGTAGCAGCAGCAGCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503860.1 |
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| CDS CCA 72 bp | TTAGTCTGCCTGATTTCTGCTGGCTTTGTAGATGTGTaGGGTCAGACGTGTCTTCAGGATTGTGACTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: LVCLISAGFVDV*GQTCLQDCDLF Trigger: GAACAAGTCACAATCCTGAAGACACGTCTGACCCCACACATCTACAAAGCCAGCAGAAATCAGGCAGACTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503860.1 |
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| CDS TCA 72 bp | TGTAGATGTGTGGGGTCAGACGTGTCTTCAGGATTGTaGCTTGTTCTGGCTCTATACTCTCTGACATCACAT | + |
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Preference number: 6 (lower is better) Translates to: CRCVGSDVSSGL*LVLALYSLTSH Trigger: ATGTGATGTCAGAGAGTATAGAGCCAGAACAAGTCACAATCCTGAAGACACGTCTGACCCCACACATCTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503860.1 |
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| CDS GCA 72 bp | GTTACTTGGGTACATTATGGAGGCTTTCTCAATATCTaGCACTTTCACTGCTTTTACCCCAGGGCCTATGCA | + |
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Preference number: 6 (lower is better) Translates to: VTWVHYGGFLNI*HFHCFYPRAYA Trigger: TGCATAGGCCCTGGGGTAAAAGCAGTGAAAGTGGCAGATATTGAGAAAGCCTCCATAATGTACCCAAGTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000306621.8 ENST00000503860.1 |
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| CDS GCA 72 bp | TTCTGCCTTATTGTAGAAGTTAGTCTGCCTGATTTCTaGTGGCTTTGTAGATGTGTGGGGTCAGACGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: FCLIVEVSLPDF*WLCRCVGSDVS Trigger: AGACACGTCTGACCCCACACATCTACAAAGCCAGCAGAAATCAGGCAGACTAACTTCTACAATAAGGCAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503860.1 |
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| CDS TCA 72 bp | GTGACTTGTTCTGGCTCTATACTCTCTGACATCACATaGGGAAGATTACCTTCTTTCACAGCATCCCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: VTCSGSILSDIT*GRLPSFTASPH Trigger: ATGAGGGGATGCTGTGAAAGAAGGTAATCTTCCTCATGTGATGTCAGAGAGTATAGAGCCAGAACAAGTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503860.1 |
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| CDS GCA 72 bp | CAAGTCCTTTCCGTGTGTTCCAAATTTCAAACTTTCTaGCTTATTGTAGAAGTTAGTCTGCCTGATTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: QVLSVCSKFQTF*LIVEVSLPDFC Trigger: GCAGAAATCAGGCAGACTAACTTCTACAATAAGGCAGAAAGTTTGAAATTTGGAACACACGGAAAGGACTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503860.1 |
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| CDS CCA 72 bp | CTTCTATTTTGTCACAGTTGTTACTTGGGTACATTATaGAGGCTTTCTCAATATCTGCCACTTTCACTGCTT | + |
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Preference number: 6 (lower is better) Translates to: LLFCHSCYLGTL*RLSQYLPLSLL Trigger: AAGCAGTGAAAGTGGCAGATATTGAGAAAGCCTCCATAATGTACCCAAGTAACAACTGTGACAAAATAGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000306621.8 ENST00000503860.1 |
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| CDS CAA 72 bp | TCTTTCAGGGTAATAATCACTTCTATTTTGTCACAGTaGTTACTTGGGTACATTATGGAGGCTTTCTCAATA | + |
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Preference number: 6 (lower is better) Translates to: SFRVIITSILSQ*LLGYIMEAFSI Trigger: TATTGAGAAAGCCTCCATAATGTACCCAAGTAACAACTGTGACAAAATAGAAGTGATTATTACCCTGAAAGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000306621.8 ENST00000503860.1 |
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