Pregenerated sensors for CXCL10 (Homo sapiens)
Ensembl gene IDs: ENSG00000169245Ensembl transcript IDs: ENST00000306602.3
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACATATACTCCATGTAGGGAAGTGATGGGAGAGGCAGCCTCTGTGTaGTCCATCCTTGGAAGCACTGCATCGATTTTGCTCCCCTCTGGT | + |
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Preference number: 1 (lower is better) Translates to: TYTPCREVMGEAASV*SILGSTASILLPSG Trigger: ACCAGAGGGGAGCAAAATCGATGCAGTGCTTCCAAGGATGGACCACACAGAGGCTGCCTCTCCCATCACTTCCCTACATGGAGTATATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306602.3 |
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| 3UTR CCA 72 bp | CCATGTAGGGAAGTGATGGGAGAGGCAGCCTCTGTGTaGTCCATCCTTGGAAGCACTGCATCGATTTTGCTC | + |
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Preference number: 3 (lower is better) Translates to: PCREVMGEAASV*SILGSTASILL Trigger: GAGCAAAATCGATGCAGTGCTTCCAAGGATGGACCACACAGAGGCTGCCTCTCCCATCACTTCCCTACATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306602.3 |
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| 3UTR TCA 72 bp | TCCTGTATGTGTTTGGAATTGTATGTAGGTAGCCACTaGAAGAATTTGGGCCCCTTGGGAGGATGGCAGTGG | + |
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Preference number: 3 (lower is better) Translates to: SCMCLELYVGSH*KNLGPLGGWQW Trigger: CCACTGCCATCCTCCCAAGGGGCCCAAATTCTTTCAGTGGCTACCTACATACAATTCCAAACACATACAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306602.3 |
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| CDS-3UTR CCA 90 bp | GCCTCTGTGTGGTCCATCCTTGGAAGCACTGCATCGATTTTGCTCCCCTCTGGTGAGGCAGCCTCTGTGTaGTCCATCCTTGGAAGCACT | + |
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Preference number: 4 (lower is better) Translates to: ASVWSILGSTASILLPSGEAASV*SILGST Trigger: AGTGCTTCCAAGGATGGACCACACAGAGGCTGCCTC...ACCAGAGGGGAGCAAAATCGATGCAGTGCTTCCAAGGATGGACCACACAGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306602.3 |
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| CDS-3UTR CCA 90 bp | ATGGGAGAGGCAGCCTCTGTGTGGTCCATCCTTGGAAGCACTGCATCGATTTTGGCCACTGAAAGAATTTaGGCCCCTTGGGAGGATGGC | + |
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Preference number: 4 (lower is better) Translates to: MGEAASVWSILGSTASILATERI*APWEDG Trigger: GCCATCCTCCCAAGGGGCCCAAATTCTTTCAGTGGC...CAAAATCGATGCAGTGCTTCCAAGGATGGACCACACAGAGGCTGCCTCTCCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306602.3 |
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| CDS-3UTR CCA 90 bp | ATGGGAGAGGCAGCCTCTGTGTGGTCCATCCTTGGAAGCACTGCATCGATTTTGAGAATTTGGGCCCCTTaGGAGGATGGCAGTGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: MGEAASVWSILGSTASILRIWAP*EDGSGS Trigger: ACTTCCACTGCCATCCTCCCAAGGGGCCCAAATTCT...CAAAATCGATGCAGTGCTTCCAAGGATGGACCACACAGAGGCTGCCTCTCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306602.3 |
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| CDS-3UTR GCA 90 bp | GCCTCTGTGTGGTCCATCCTTGGAAGCACTGCATCGATTTTGCTCCCCTCTGGTGACTGGAGGTTCCTCTaGTGTAGGCTCAGAATATGT | + |
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Preference number: 4 (lower is better) Translates to: ASVWSILGSTASILLPSGDWRFL*CRLRIC Trigger: ACATATTCTGAGCCTACAGCAGAGGAACCTCCAGTC...ACCAGAGGGGAGCAAAATCGATGCAGTGCTTCCAAGGATGGACCACACAGAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306602.3 |
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| CDS-3UTR GCA 90 bp | ATGGGAGAGGCAGCCTCTGTGTGGTCCATCCTTGGAAGCACTGCATCGATTTTGCATCCTTGGAAGCACTaGATCGATTTTGCTCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: MGEAASVWSILGSTASILHPWKH*IDFAPL Trigger: GAGGGGAGCAAAATCGATGCAGTGCTTCCAAGGATG...CAAAATCGATGCAGTGCTTCCAAGGATGGACCACACAGAGGCTGCCTCTCCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000306602.3 |
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| CDS-3UTR TCA 90 bp | TATACTCCATGTAGGGAAGTGATGGGAGAGGCAGCCTCTGTGTGGTCCATCCTTTTTGATTCATGGTGCTaGGACTGGAGGTTCCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: YTPCREVMGEAASVWSILFDSWC*DWRFLC Trigger: GCAGAGGAACCTCCAGTCTCAGCACCATGAATCAAA...AAGGATGGACCACACAGAGGCTGCCTCTCCCATCACTTCCCTACATGGAGTATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000306602.3 |
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| CDS-3UTR CCA 90 bp | CCTACAGGAGTAGTAGCAGCTGATTTGGTGACCATCATTGGTCACCTTTTAGTGGGCCCCTTGGGAGGATaGCAGTGGAAGTCCATGAAG | + |
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Preference number: 4 (lower is better) Translates to: PTGVVAADLVTIIGHLLVGPLGG*QWKSMK Trigger: CTTCATGGACTTCCACTGCCATCCTCCCAAGGGGCC...CACTAAAAGGTGACCAATGATGGTCACCAAATCAGCTGCTACTACTCCTGTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306602.3 |
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| CDS-3UTR TCA 90 bp | TATACTCCATGTAGGGAAGTGATGGGAGAGGCAGCCTCTGTGTGGTCCATCCTTAGGAGTAGTAGCAGCTaGTTTGGTGACCATCATTGG | + |
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Preference number: 4 (lower is better) Translates to: YTPCREVMGEAASVWSILRSSSS*FGDHHW Trigger: CCAATGATGGTCACCAAATCAGCTGCTACTACTCCT...AAGGATGGACCACACAGAGGCTGCCTCTCCCATCACTTCCCTACATGGAGTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306602.3 |
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| CDS-3UTR TCA 90 bp | TATACTCCATGTAGGGAAGTGATGGGAGAGGCAGCCTCTGTGTGGTCCATCCTTTATGTAGGTAGCCACTaGAAGAATTTGGGCCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: YTPCREVMGEAASVWSILYVGSH*KNLGPL Trigger: CAAGGGGCCCAAATTCTTTCAGTGGCTACCTACATA...AAGGATGGACCACACAGAGGCTGCCTCTCCCATCACTTCCCTACATGGAGTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306602.3 |
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| CDS-3UTR TCA 90 bp | GCCTCTGTGTGGTCCATCCTTGGAAGCACTGCATCGATTTTGCTCCCCTCTGGTAGAACAATTATGGCTTaGCATATACTCCATGTAGGG | + |
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Preference number: 4 (lower is better) Translates to: ASVWSILGSTASILLPSGRTIMA*HILHVG Trigger: CCCTACATGGAGTATATGTCAAGCCATAATTGTTCT...ACCAGAGGGGAGCAAAATCGATGCAGTGCTTCCAAGGATGGACCACACAGAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306602.3 |
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| CDS-3UTR TCA 90 bp | ATGGGAGAGGCAGCCTCTGTGTGGTCCATCCTTGGAAGCACTGCATCGATTTTGGGCAGTGGAAGTCCATaGAGTAAAGAGCATTCTTTA | + |
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Preference number: 4 (lower is better) Translates to: MGEAASVWSILGSTASILGSGSP*SKEHSL Trigger: TAAAGAATGCTCTTTACTTCATGGACTTCCACTGCC...CAAAATCGATGCAGTGCTTCCAAGGATGGACCACACAGAGGCTGCCTCTCCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306602.3 |
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| CDS-3UTR CCA 90 bp | TATACTCCATGTAGGGAAGTGATGGGAGAGGCAGCCTCTGTGTGGTCCATCCTTTGTGTGGTCCATCCTTaGAAGCACTGCATCGATTTT | + |
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Preference number: 4 (lower is better) Translates to: YTPCREVMGEAASVWSILCVVHP*KHCIDF Trigger: AAAATCGATGCAGTGCTTCCAAGGATGGACCACACA...AAGGATGGACCACACAGAGGCTGCCTCTCCCATCACTTCCCTACATGGAGTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306602.3 |
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| CDS-3UTR TCA 90 bp | ATGGGAGAGGCAGCCTCTGTGTGGTCCATCCTTGGAAGCACTGCATCGATTTTGCTTGGATTAACAGGTTaGTTACTAATGCTGATGCAG | + |
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Preference number: 4 (lower is better) Translates to: MGEAASVWSILGSTASILLGLTG*LLMLMQ Trigger: CTGCATCAGCATTAGTAATCAACCTGTTAATCCAAG...CAAAATCGATGCAGTGCTTCCAAGGATGGACCACACAGAGGCTGCCTCTCCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306602.3 |
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| CDS-3UTR CCA 90 bp | TATACTCCATGTAGGGAAGTGATGGGAGAGGCAGCCTCTGTGTGGTCCATCCTTAATGATCTCAACACGTaGACAAAATTGGCTTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: YTPCREVMGEAASVWSILNDLNT*TKLACR Trigger: CCTGCAAGCCAATTTTGTCCACGTGTTGAGATCATT...AAGGATGGACCACACAGAGGCTGCCTCTCCCATCACTTCCCTACATGGAGTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306602.3 |
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| CDS-3UTR TCA 90 bp | TATACTCCATGTAGGGAAGTGATGGGAGAGGCAGCCTCTGTGTGGTCCATCCTTCTTTCAGTAAATTCTTaGTGGCCTTCGATTCTGGAT | + |
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Preference number: 4 (lower is better) Translates to: YTPCREVMGEAASVWSILLSVNS*WPSILD Trigger: ATCCAGAATCGAAGGCCATCAAGAATTTACTGAAAG...AAGGATGGACCACACAGAGGCTGCCTCTCCCATCACTTCCCTACATGGAGTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306602.3 |
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| CDS-3UTR TCA 90 bp | ATTAACCTTCCTACAGGAGTAGTAGCAGCTGATTTGGTGACCATCATTGGTCACGAGAGAGGTACTCCTTaGATGCCACTTAGAGTCAGA | + |
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Preference number: 4 (lower is better) Translates to: INLPTGVVAADLVTIIGHERGTP*MPLRVR Trigger: TCTGACTCTAAGTGGCATTCAAGGAGTACCTCTCTC...GTGACCAATGATGGTCACCAAATCAGCTGCTACTACTCCTGTAGGAAGGTTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306602.3 |
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| CDS-3UTR TCA 90 bp | ATTAACCTTCCTACAGGAGTAGTAGCAGCTGATTTGGTGACCATCATTGGTCACATCAGAATGGCAGTTTaGTTCATGGTGCTGAGACTG | + |
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Preference number: 4 (lower is better) Translates to: INLPTGVVAADLVTIIGHIRMAV*FMVLRL Trigger: CAGTCTCAGCACCATGAATCAAACTGCCATTCTGAT...GTGACCAATGATGGTCACCAAATCAGCTGCTACTACTCCTGTAGGAAGGTTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306602.3 |
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| CDS-3UTR CCA 90 bp | ACTAAGAACAATTATGGCTTGACATATACTCCATGTAGGGAAGTGATGGGAGAGGATGGCCTTCGATTCTaGATTCAGACATCTCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: TKNNYGLTYTPCREVMGEDGLRF*IQTSLL Trigger: GAGAAGAGATGTCTGAATCCAGAATCGAAGGCCATC...CTCTCCCATCACTTCCCTACATGGAGTATATGTCAAGCCATAATTGTTCTTAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306602.3 |
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| CDS-3UTR GCA 90 bp | ACTAAGAACAATTATGGCTTGACATATACTCCATGTAGGGAAGTGATGGGAGAGGAGGTACTCCTTGAATaGCACTTAGAGTCAGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: TKNNYGLTYTPCREVMGEEVLLE*HLESER Trigger: TCTTTCTGACTCTAAGTGGCATTCAAGGAGTACCTC...CTCTCCCATCACTTCCCTACATGGAGTATATGTCAAGCCATAATTGTTCTTAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306602.3 |
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| CDS-3UTR CAA 90 bp | GCCTCTGTGTGGTCCATCCTTGGAAGCACTGCATCGATTTTGCTCCCCTCTGGTAAGAATTTGGGCCCCTaGGGAGGATGGCAGTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: ASVWSILGSTASILLPSGKNLGP*GGWQWK Trigger: CTTCCACTGCCATCCTCCCAAGGGGCCCAAATTCTT...ACCAGAGGGGAGCAAAATCGATGCAGTGCTTCCAAGGATGGACCACACAGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000306602.3 |
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| CDS-3UTR CAA 90 bp | GCCTCTGTGTGGTCCATCCTTGGAAGCACTGCATCGATTTTGCTCCCCTCTGGTCTGTGTGGTCCATCCTaGGAAGCACTGCATCGATTT | + |
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Preference number: 5 (lower is better) Translates to: ASVWSILGSTASILLPSGLCGPS*EALHRF Trigger: AAATCGATGCAGTGCTTCCAAGGATGGACCACACAG...ACCAGAGGGGAGCAAAATCGATGCAGTGCTTCCAAGGATGGACCACACAGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306602.3 |
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| CDS-3UTR CAA 90 bp | GCCTCTGTGTGGTCCATCCTTGGAAGCACTGCATCGATTTTGCTCCCCTCTGGTGATTCCTTAGTACCCTaGGAAGATGGGAAAGGTGAG | + |
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Preference number: 5 (lower is better) Translates to: ASVWSILGSTASILLPSGDSLVP*EDGKGE Trigger: CTCACCTTTCCCATCTTCCAAGGGTACTAAGGAATC...ACCAGAGGGGAGCAAAATCGATGCAGTGCTTCCAAGGATGGACCACACAGAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306602.3 |
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| CDS-3UTR CAA 90 bp | GCCTCTGTGTGGTCCATCCTTGGAAGCACTGCATCGATTTTGCTCCCCTCTGGTGCTTTCAGTAAATTCTaGATGGCCTTCGATTCTGGA | + |
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Preference number: 5 (lower is better) Translates to: ASVWSILGSTASILLPSGAFSKF*MAFDSG Trigger: TCCAGAATCGAAGGCCATCAAGAATTTACTGAAAGC...ACCAGAGGGGAGCAAAATCGATGCAGTGCTTCCAAGGATGGACCACACAGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306602.3 |
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| CDS-3UTR CAA 90 bp | TATACTCCATGTAGGGAAGTGATGGGAGAGGCAGCCTCTGTGTGGTCCATCCTTCCTTGGATTAACAGGTaGATTACTAATGCTGATGCA | + |
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Preference number: 5 (lower is better) Translates to: YTPCREVMGEAASVWSILPWINR*ITNADA Trigger: TGCATCAGCATTAGTAATCAACCTGTTAATCCAAGG...AAGGATGGACCACACAGAGGCTGCCTCTCCCATCACTTCCCTACATGGAGTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306602.3 |
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| CDS-3UTR CAA 90 bp | TATACTCCATGTAGGGAAGTGATGGGAGAGGCAGCCTCTGTGTGGTCCATCCTTAACACGTGGACAAAATaGGCTTGCAGGAATAATTTC | + |
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Preference number: 5 (lower is better) Translates to: YTPCREVMGEAASVWSILNTWTK*ACRNNF Trigger: GAAATTATTCCTGCAAGCCAATTTTGTCCACGTGTT...AAGGATGGACCACACAGAGGCTGCCTCTCCCATCACTTCCCTACATGGAGTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306602.3 |
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| CDS-3UTR CAA 90 bp | CCTACAGGAGTAGTAGCAGCTGATTTGGTGACCATCATTGGTCACCTTTTAGTGAGCACTGCATCGATTTaGCTCCCCTCTGGTTTTAAG | + |
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Preference number: 5 (lower is better) Translates to: PTGVVAADLVTIIGHLLVSTASI*LPSGFK Trigger: CTTAAAACCAGAGGGGAGCAAAATCGATGCAGTGCT...CACTAAAAGGTGACCAATGATGGTCACCAAATCAGCTGCTACTACTCCTGTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000306602.3 |
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| CDS-3UTR CAA 90 bp | CCTACAGGAGTAGTAGCAGCTGATTTGGTGACCATCATTGGTCACCTTTTAGTGAATCAGAATGGCAGTTaGATTCATGGTGCTGAGACT | + |
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Preference number: 5 (lower is better) Translates to: PTGVVAADLVTIIGHLLVNQNGS*IHGAET Trigger: AGTCTCAGCACCATGAATCAAACTGCCATTCTGATT...CACTAAAAGGTGACCAATGATGGTCACCAAATCAGCTGCTACTACTCCTGTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306602.3 |
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| CDS-3UTR CAA 90 bp | CCTACAGGAGTAGTAGCAGCTGATTTGGTGACCATCATTGGTCACCTTTTAGTGCCTTCCTGTATGTGTTaGGAATTGTATGTAGGTAGC | + |
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Preference number: 5 (lower is better) Translates to: PTGVVAADLVTIIGHLLVPSCMC*ELYVGS Trigger: GCTACCTACATACAATTCCAAACACATACAGGAAGG...CACTAAAAGGTGACCAATGATGGTCACCAAATCAGCTGCTACTACTCCTGTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306602.3 |
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| CDS-3UTR CAA 90 bp | ACTAAGAACAATTATGGCTTGACATATACTCCATGTAGGGAAGTGATGGGAGAGGTAGTAGCAGCTGATTaGGTGACCATCATTGGTCAC | + |
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Preference number: 5 (lower is better) Translates to: TKNNYGLTYTPCREVMGEVVAAD*VTIIGH Trigger: GTGACCAATGATGGTCACCAAATCAGCTGCTACTAC...CTCTCCCATCACTTCCCTACATGGAGTATATGTCAAGCCATAATTGTTCTTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306602.3 |
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| CDS-3UTR CAA 90 bp | ACTAAGAACAATTATGGCTTGACATATACTCCATGTAGGGAAGTGATGGGAGAGCTTTTAGACCTTTCCTaGCTAACTGCTTTCAGTAAA | + |
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Preference number: 5 (lower is better) Translates to: TKNNYGLTYTPCREVMGELLDLS*LTAFSK Trigger: TTTACTGAAAGCAGTTAGCAAGGAAAGGTCTAAAAG...CTCTCCCATCACTTCCCTACATGGAGTATATGTCAAGCCATAATTGTTCTTAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306602.3 |
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| CDS TCA 90 bp | GCAGGAATAATTTCAAGTTTTTCTAAAGACCTTGGATTAACAGGTTaGTTACTAATGCTGATGCAGGTACAGCGTACAGTTCTAGAGAGA | + |
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Preference number: 5 (lower is better) Translates to: AGIISSFSKDLGLTG*LLMLMQVQRTVLER Trigger: TCTCTCTAGAACTGTACGCTGTACCTGCATCAGCATTAGTAATCAACCTGTTAATCCAAGGTCTTTAGAAAAACTTGAAATTATTCCTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000306602.3 |
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| CDS CCA 72 bp | AGTGATGGGAGAGGCAGCCTCTGTGTGGTCCATCCTTaGAAGCACTGCATCGATTTTGCTCCCCTCTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: SDGRGSLCVVHP*KHCIDFAPLWF Trigger: AAACCAGAGGGGAGCAAAATCGATGCAGTGCTTCCAAGGATGGACCACACAGAGGCTGCCTCTCCCATCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306602.3 |
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| CDS CAA 72 bp | AGTCAGAAAGATAAGGCAGCAAATCAGAATGGCAGTTaGATTCATGGTGCTGAGACTGGAGGTTCCTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: SQKDKAANQNGS*IHGAETGGSSA Trigger: AGCAGAGGAACCTCCAGTCTCAGCACCATGAATCAAACTGCCATTCTGATTTGCTGCCTTATCTTTCTGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306602.3 |
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| CDS CAA 90 bp | GGAGATCTTTTAGACCTTTCCTTGCTAACTGCTTTCAGTAAATTCTaGATGGCCTTCGATTCTGGATTCAGACATCTCTTCTCACCCTTC | + |
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Preference number: 6 (lower is better) Translates to: GDLLDLSLLTAFSKF*MAFDSGFRHLFSPF Trigger: GAAGGGTGAGAAGAGATGTCTGAATCCAGAATCGAAGGCCATCAAGAATTTACTGAAAGCAGTTAGCAAGGAAAGGTCTAAAAGATCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306602.3 |
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| CDS TCA 72 bp | ATTTCAAGTTTTTCTAAAGACCTTGGATTAACAGGTTaGTTACTAATGCTGATGCAGGTACAGCGTACAGTT | + |
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Preference number: 6 (lower is better) Translates to: ISSFSKDLGLTG*LLMLMQVQRTV Trigger: AACTGTACGCTGTACCTGCATCAGCATTAGTAATCAACCTGTTAATCCAAGGTCTTTAGAAAAACTTGAAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000306602.3 |
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| CDS CCA 72 bp | ACCCTTCTTTTTCATTGTAGCAATGATCTCAACACGTaGACAAAATTGGCTTGCAGGAATAATTTCAAGTTT | + |
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Preference number: 6 (lower is better) Translates to: TLLFHCSNDLNT*TKLACRNNFKF Trigger: AAACTTGAAATTATTCCTGCAAGCCAATTTTGTCCACGTGTTGAGATCATTGCTACAATGAAAAAGAAGGGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000306602.3 |
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