RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CX3CR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000168329

Ensembl transcript IDs: ENST00000358309.3, ENST00000399220.3, ENST00000412814.1, ENST00000435290.1, ENST00000541347.5, ENST00000542107.5

Found 566 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGAACCAGCCTCTTCTGTGTCTGGGCTATGCCACGCAGCAGCACCTaGAGGCTCTTCCAAGCTTTGTCAGCACCACAACTTGGGCACAGC +
Preference number: 1 (lower is better)
Translates to: RTSLFCVWAMPRSST*RLFQALSAPQLGHS
Trigger: GCTGTGCCCAAGTTGTGGTGCTGACAAAGCTTGGAAGAGCCTGCAGGTGCTGCTGCGTGGCATAGCCCAGACACAGAAGAGGCTGGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR CCA 90 bp CAGCAGCACCTGCAGGCTCTTCCAAGCTTTGTCAGCACCACAACTTaGGCACAGCACAGCAGTGCCAGGTGTGGAAAGCAGAAGTCTAAG +
Preference number: 1 (lower is better)
Translates to: QQHLQALPSFVSTTT*AQHSSARCGKQKSK
Trigger: CTTAGACTTCTGCTTTCCACACCTGGCACTGCTGTGCTGTGCCCAAGTTGTGGTGCTGACAAAGCTTGGAAGAGCCTGCAGGTGCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR GCA 90 bp GTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCACTGGGTaGCATCGTAAGAACCAGCCTCTTCTGTGTCTGGGCTATGCCACG +
Preference number: 1 (lower is better)
Translates to: VTEGYHSVDLGVLTG*HRKNQPLLCLGYAT
Trigger: CGTGGCATAGCCCAGACACAGAAGAGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR CCA 90 bp AGGGATGGGCACCTGATACAAACTTGGCCTATCAGAGCACTTCCCTaGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCCC +
Preference number: 1 (lower is better)
Translates to: RDGHLIQTWPIRALP*EFCPWGQRNMGVSP
Trigger: GGGACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGGCCAAGTTTGTATCAGGTGCCCATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR GCA 90 bp CACCTGATACAAACTTGGCCTATCAGAGCACTTCCCTGGGAATTTTaGCCTTGGGGCCAGAGAAACATGGGTGTCAGTCCCTCTCTGGTG +
Preference number: 1 (lower is better)
Translates to: HLIQTWPIRALPWEF*PWGQRNMGVSPSLV
Trigger: CACCAGAGAGGGACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGGCCAAGTTTGTATCAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR CCA 90 bp TTTCCCTTACTGGCCTGGGAGCAGGTGGAGATGCATGAGGTCATATaGAAGAGACAGGCTGATAGGATGGGTGGAGTCCTTTGGGAAGGA +
Preference number: 1 (lower is better)
Translates to: FPLLAWEQVEMHEVI*KRQADRMGGVLWEG
Trigger: TCCTTCCCAAAGGACTCCACCCATCCTATCAGCCTGTCTCTTCCATATGACCTCATGCATCTCCACCTGCTCCCAGGCCAGTAAGGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR CCA 90 bp CCACAAGGTGACTGGGAGGGGATATTCAAGGCAGTCCAGGAGAGTTaGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCACT +
Preference number: 1 (lower is better)
Translates to: PQGDWEGIFKAVQES*VTEGYHSVDLGVLT
Trigger: AGTGAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGCCTTGAATATCCCCTCCCAGTCACCTTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR CCA 90 bp AGATTTGAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTaGTTTCCCCTCACTTTGAGGGCTCAGACACCCTTTTGCTTGTGC +
Preference number: 1 (lower is better)
Translates to: RFESQREGILAWLRP*FPLTLRAQTPFCLC
Trigger: GCACAAGCAAAAGGGTGTCTGAGCCCTCAAAGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTCAAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR CCA 90 bp ATACAAACTTGGCCTATCAGAGCACTTCCCTGGGAATTTTGCCCTTaGGGCCAGAGAAACATGGGTGTCAGTCCCTCTCTGGTGATAAAG +
Preference number: 1 (lower is better)
Translates to: IQTWPIRALPWEFCP*GQRNMGVSPSLVIK
Trigger: CTTTATCACCAGAGAGGGACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGGCCAAGTTTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR CCA 90 bp CATCTTATATATCCCTTCCCCATGGATAACAGCACCTTCCAGGGATaGGCACCTGATACAAACTTGGCCTATCAGAGCACTTCCCTGGGA +
Preference number: 1 (lower is better)
Translates to: HLIYPFPMDNSTFQG*APDTNLAYQSTSLG
Trigger: TCCCAGGGAAGTGCTCTGATAGGCCAAGTTTGTATCAGGTGCCCATCCCTGGAAGGTGCTGTTATCCATGGGGAAGGGATATATAAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR GCA 90 bp CTCAGGCCCTGGTTTCCCCTCACTTTGAGGGCTCAGACACCCTTTTaGTTGTGCCACAATATGAACAATATTCACCACCCTCATTTAACT +
Preference number: 1 (lower is better)
Translates to: LRPWFPLTLRAQTPF*LCHNMNNIHHPHLT
Trigger: AGTTAAATGAGGGTGGTGAATATTGTTCATATTGTGGCACAAGCAAAAGGGTGTCTGAGCCCTCAAAGTGAGGGGAAACCAGGGCCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR CCA 90 bp CATGAGATTGGACTGGAAGCTTCCATCTTATATATCCCTTCCCCATaGATAACAGCACCTTCCAGGGATGGGCACCTGATACAAACTTGG +
Preference number: 1 (lower is better)
Translates to: HEIGLEASILYIPSP*ITAPSRDGHLIQTW
Trigger: CCAAGTTTGTATCAGGTGCCCATCCCTGGAAGGTGCTGTTATCCATGGGGAAGGGATATATAAGATGGAAGCTTCCAGTCCAATCTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR GCA 90 bp CCCTGGTTTCCCCTCACTTTGAGGGCTCAGACACCCTTTTGCTTGTaGCACAATATGAACAATATTCACCACCCTCATTTAACTAAACTA +
Preference number: 1 (lower is better)
Translates to: PWFPLTLRAQTPFCL*HNMNNIHHPHLTKL
Trigger: TAGTTTAGTTAAATGAGGGTGGTGAATATTGTTCATATTGTGGCACAAGCAAAAGGGTGTCTGAGCCCTCAAAGTGAGGGGAAACCAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR GCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGGCAGTGGGGAGCCCTTaGAGGTTTGGGGACATGATG +
Preference number: 2 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVAVGSP*RFGDMM
Trigger: CATCATGTCCCCAAACCTGCAAGGGCTCCCCACTGC...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR GCA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGGCAGTGGGGAGCCCTTaGAGGTTTGGGGACATGATG +
Preference number: 2 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRAVGSP*RFGDMM
Trigger: CATCATGTCCCCAAACCTGCAAGGGCTCCCCACTGC...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR GCA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCCCACGCAGCAGCACCTaGAGGCTCTTCCAAGCTTTG +
Preference number: 2 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLPRSST*RLFQAL
Trigger: CAAAGCTTGGAAGAGCCTGCAGGTGCTGCTGCGTGG...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR GCA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCTCTGTGTCTGGGCTATaGCACGCAGCAGCACCTGCA +
Preference number: 2 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLSVSGL*HAAAPA
Trigger: TGCAGGTGCTGCTGCGTGGCATAGCCCAGACACAGA...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR GCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGTCTGTGTCTGGGCTATaGCACGCAGCAGCACCTGCA +
Preference number: 2 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVSVSGL*HAAAPA
Trigger: TGCAGGTGCTGCTGCGTGGCATAGCCCAGACACAGA...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGAGCCTCTTCTGTGTCTaGGCTATGCCACGCAGCAGC +
Preference number: 2 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVSLFCV*AMPRSS
Trigger: GCTGCTGCGTGGCATAGCCCAGACACAGAAGAGGCT...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CCA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCAGCCTCTTCTGTGTCTaGGCTATGCCACGCAGCAGC +
Preference number: 2 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLSLFCV*AMPRSS
Trigger: GCTGCTGCGTGGCATAGCCCAGACACAGAAGAGGCT...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR CAA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTaGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTCTTCTG +
Preference number: 2 (lower is better)
Translates to: AVQESWVTEGYHSVD*GVLTGCHRKNQPLL
Trigger: CAGAAGAGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR GCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGGGCACAGCACAGCAGTaGCAGGTGTGGAAAGCAGAA +
Preference number: 2 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVGTAQQ*QVWKAE
Trigger: TTCTGCTTTCCACACCTGGCACTGCTGTGCTGTGCC...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CCA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGGAGCCCTTGCAGGTTTaGGGACATGATGGAAGAGGG +
Preference number: 2 (lower is better)
Translates to: SQATGVGVGIHPFLFGGREPLQV*GHDGRG
Trigger: CCCTCTTCCATCATGTCCCCAAACCTGCAAGGGCTC...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR GCA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGCTTCCCTGGGAATTTTaGCCTTGGGGCCAGAGAAAC +
Preference number: 2 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRLPWEF*PWGQRN
Trigger: GTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAG...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CCA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCATCAGAGCACTTCCCTaGGAATTTTGCCCTTGGGGC +
Preference number: 2 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLIRALP*EFCPWG
Trigger: GCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGAT...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CCA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGAATCAGGGGAGAGGCTaGATCAGGCACATGGTAAGG +
Preference number: 2 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRNQGRG*IRHMVR
Trigger: CCTTACCATGTGCCTGATCCAGCCTCTCCCCTGATT...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CCA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCAATCAGGGGAGAGGCTaGATCAGGCACATGGTAAGG +
Preference number: 2 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLNQGRG*IRHMVR
Trigger: CCTTACCATGTGCCTGATCCAGCCTCTCCCCTGATT...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CCA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTGGTAGGACCCCATGGTaGACGTATGAGAAGCCAAGC +
Preference number: 2 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPGRTPW*TYEKPS
Trigger: GCTTGGCTTCTCATACGTCCACCATGGGGTCCTACC...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGGACAGGCTGATAGGATaGGTGGAGTCCTTTGGGAAG +
Preference number: 2 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVDRLIG*VESFGK
Trigger: CTTCCCAAAGGACTCCACCCATCCTATCAGCCTGTC...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGTGGCCTGGGAGCAGGTaGAGATGCATGAGGTCATAT +
Preference number: 2 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVWPGSR*RCMRSY
Trigger: ATATGACCTCATGCATCTCCACCTGCTCCCAGGCCA...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CCA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCTGGCCTGGGAGCAGGTaGAGATGCATGAGGTCATAT +
Preference number: 2 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLWPGSR*RCMRSY
Trigger: ATATGACCTCATGCATCTCCACCTGCTCCCAGGCCA...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGTTTCCCTTACTGGCCTaGGAGCAGGTGGAGATGCAT +
Preference number: 2 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVFPLLA*EQVEMH
Trigger: ATGCATCTCCACCTGCTCCCAGGCCAGTAAGGGAAA...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR GCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGGGGAGCAGGTGGAGATaGATGAGGTCATATGGAAGA +
Preference number: 2 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVGSRWR*MRSYGR
Trigger: TCTTCCATATGACCTCATGCATCTCCACCTGCTCCC...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR GCA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCGGGAGCAGGTGGAGATaGATGAGGTCATATGGAAGA +
Preference number: 2 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLGSRWR*MRSYGR
Trigger: TCTTCCATATGACCTCATGCATCTCCACCTGCTCCC...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR GCA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGGGGAGCAGGTGGAGATaGATGAGGTCATATGGAAGA +
Preference number: 2 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRGSRWR*MRSYGR
Trigger: TCTTCCATATGACCTCATGCATCTCCACCTGCTCCC...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CCA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCATTGGTAGGACCCCATaGTGGACGTATGAGAAGCCA +
Preference number: 2 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLIGRTP*WTYEKP
Trigger: TGGCTTCTCATACGTCCACCATGGGGTCCTACCAAT...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CCA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTGACAGGCTGATAGGATaGGTGGAGTCCTTTGGGAAG +
Preference number: 2 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPDRLIG*VESFGK
Trigger: CTTCCCAAAGGACTCCACCCATCCTATCAGCCTGTC...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CCA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTTTTCCCTTACTGGCCTaGGAGCAGGTGGAGATGCAT +
Preference number: 2 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPFPLLA*EQVEMH
Trigger: ATGCATCTCCACCTGCTCCCAGGCCAGTAAGGGAAA...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CCA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCTTCTATTTCCCTTACTaGCCTGGGAGCAGGTGGAGA +
Preference number: 2 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLFYFPY*PGSRWR
Trigger: TCTCCACCTGCTCCCAGGCCAGTAAGGGAAATAGAA...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CCA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCCCAAGCTACTGGAGTTaGGGTTGGAATCCATCCCTT +
Preference number: 2 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLPSYWS*GWNPSL
Trigger: AAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGG...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR TCA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCGCTTGTGCCACAATATaGACAATATTCACCACCCTC +
Preference number: 2 (lower is better)
Translates to: EHFPGNFALGARETWVSVACATI*TIFTTL
Trigger: GAGGGTGGTGAATATTGTTCATATTGTGGCACAAGC...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR TCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCAGGAAACTGAAGCTTaGTTTGTCCCAAGCTACTGG +
Preference number: 2 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVQETEA*FVPSYW
Trigger: CCAGTAGCTTGGGACAAATCAAGCTTCAGTTTCCTG...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR GCA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCGCTCAGACACCCTTTTaGTTGTGCCACAATATGAAC +
Preference number: 2 (lower is better)
Translates to: EHFPGNFALGARETWVSVAQTPF*LCHNMN
Trigger: GTTCATATTGTGGCACAAGCAAAAGGGTGTCTGAGC...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR GCA 90 bp ATAACAGCACCTTCCAGGGATGGGCACCTGATACAAACTTGGCCTATCAGAGCACTTCCCTGGGAATTTTaGCCTTGGGGCCAGAGAAAC +
Preference number: 2 (lower is better)
Translates to: ITAPSRDGHLIQTWPIRALPWEF*PWGQRN
Trigger: GTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAG...TGCTCTGATAGGCCAAGTTTGTATCAGGTGCCCATCCCTGGAAGGTGCTGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CCA 90 bp GAGACCTGCAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATGATCTCTATGAGGGAATTCTAGCTTaGCTCAGGCCCTGGTTTCCC +
Preference number: 2 (lower is better)
Translates to: ETCKSWWLVPHAGKDDLYEGILA*LRPWFP
Trigger: GGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTC...ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CCA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTTGGGAATTTTGCCCTTaGGGCCAGAGAAACATGGGT +
Preference number: 2 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPWEFCP*GQRNMG
Trigger: ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCA...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGTATATCCCTTCCCCATaGATAACAGCACCTTCCAGG +
Preference number: 2 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVYIPSP*ITAPSR
Trigger: CCTGGAAGGTGCTGTTATCCATGGGGAAGGGATATA...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CCA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCTATATCCCTTCCCCATaGATAACAGCACCTTCCAGG +
Preference number: 2 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLYIPSP*ITAPSR
Trigger: CCTGGAAGGTGCTGTTATCCATGGGGAAGGGATATA...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CCA 90 bp GAGACCTGCAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATGATCTCTATGAGCCCTTGCAGGTTTaGGGACATGATGGAAGAGGG +
Preference number: 2 (lower is better)
Translates to: ETCKSWWLVPHAGKDDLYEPLQV*GHDGRG
Trigger: CCCTCTTCCATCATGTCCCCAAACCTGCAAGGGCTC...ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CCA 90 bp GAGACCTGCAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATGATCTCTATGGTAGGACCCCATGGTaGACGTATGAGAAGCCAAGC +
Preference number: 2 (lower is better)
Translates to: ETCKSWWLVPHAGKDDLYGRTPW*TYEKPS
Trigger: GCTTGGCTTCTCATACGTCCACCATGGGGTCCTACC...ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CCA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTTTCTATTTCCCTTACTaGCCTGGGAGCAGGTGGAGA +
Preference number: 2 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPFYFPY*PGSRWR
Trigger: TCTCCACCTGCTCCCAGGCCAGTAAGGGAAATAGAA...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CCA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTCCAAGCTACTGGAGTTaGGGTTGGAATCCATCCCTT +
Preference number: 2 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPPSYWS*GWNPSL
Trigger: AAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGG...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CCA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTACCTGCAAGAGTTGGTaGCTAGTTCCTCATGCTGGA +
Preference number: 2 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPTCKSW*LVPHAG
Trigger: TCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGT...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR CAA 90 bp AGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTTaGAGGGCTCAGACACCCTTTTGCTTGTGCCACAATATGAACAAT +
Preference number: 2 (lower is better)
Translates to: REGILAWLRPWFPLT*RAQTPFCLCHNMNN
Trigger: ATTGTTCATATTGTGGCACAAGCAAAAGGGTGTCTGAGCCCTCAAAGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR CAA 90 bp GATACAAACTTGGCCTATCAGAGCACTTCCCTGGGAATTTTGCCCTaGGGGCCAGAGAAACATGGGTGTCAGTCCCTCTCTGGTGATAAA +
Preference number: 2 (lower is better)
Translates to: DTNLAYQSTSLGILP*GPEKHGCQSLSGDK
Trigger: TTTATCACCAGAGAGGGACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGGCCAAGTTTGTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR TCA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGGCTTGTGCCACAATATaGACAATATTCACCACCCTC +
Preference number: 2 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRACATI*TIFTTL
Trigger: GAGGGTGGTGAATATTGTTCATATTGTGGCACAAGC...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR TCA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGGAGAAGCCAAGCATTTaGGTTTTGACTCGATGCAGT +
Preference number: 2 (lower is better)
Translates to: SQATGVGVGIHPFLFGGREKPSI*VLTRCS
Trigger: ACTGCATCGAGTCAAAACTCAAATGCTTGGCTTCTC...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR TCA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCTACAGACCAGGAAACTaGAGCTTGATTTGTCCCAAG +
Preference number: 2 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLYRPGN*SLICPK
Trigger: CTTGGGACAAATCAAGCTTCAGTTTCCTGGTCTGTA...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR TCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGTACAGACCAGGAAACTaGAGCTTGATTTGTCCCAAG +
Preference number: 2 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVYRPGN*SLICPK
Trigger: CTTGGGACAAATCAAGCTTCAGTTTCCTGGTCTGTA...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR GCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGAAAAGGGTTGAGACCTaGAAGAGTTGGTGGCTAGTT +
Preference number: 2 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVKRVET*KSWWLV
Trigger: AACTAGCCACCAACTCTTGCAGGTCTCAACCCTTTT...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CCA 90 bp GAGACCTGCAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATGATCTCTATAATCAGGGGAGAGGCTaGATCAGGCACATGGTAAGG +
Preference number: 2 (lower is better)
Translates to: ETCKSWWLVPHAGKDDLYNQGRG*IRHMVR
Trigger: CCTTACCATGTGCCTGATCCAGCCTCTCCCCTGATT...ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CCA 90 bp GAGACCTGCAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATGATCTCTATGACAGGCTGATAGGATaGGTGGAGTCCTTTGGGAAG +
Preference number: 2 (lower is better)
Translates to: ETCKSWWLVPHAGKDDLYDRLIG*VESFGK
Trigger: CTTCCCAAAGGACTCCACCCATCCTATCAGCCTGTC...ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGATGCATGAGGTCATATaGAAGAGACAGGCTGATAGG +
Preference number: 2 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVMHEVI*KRQADR
Trigger: CCTATCAGCCTGTCTCTTCCATATGACCTCATGCAT...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR CAA 90 bp GCTCAGGCCCTGGTTTCCCCTCACTTTGAGGGCTCAGACACCCTTTaGCTTGTGCCACAATATGAACAATATTCACCACCCTCATTTAAC +
Preference number: 2 (lower is better)
Translates to: AQALVSPHFEGSDTL*LVPQYEQYSPPSFN
Trigger: GTTAAATGAGGGTGGTGAATATTGTTCATATTGTGGCACAAGCAAAAGGGTGTCTGAGCCCTCAAAGTGAGGGGAAACCAGGGCCTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR CAA 90 bp GGGGAGAGGCTGGATCAGGCACATGGTAAGGGTGATGTGTGGCATTaGTTTTGTGTAATCAGAATAGTACCCACCCATCCAACTTCTTGG +
Preference number: 2 (lower is better)
Translates to: GERLDQAHGKGDVWH*FCVIRIVPTHPTSW
Trigger: CCAAGAAGTTGGATGGGTGGGTACTATTCTGATTACACAAAACAAATGCCACACATCACCCTTACCATGTGCCTGATCCAGCCTCTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR TCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGAGGATGATCTCTATGTaGAAGGTACCTTATCCCTCT +
Preference number: 2 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVRMISM*KVPYPS
Trigger: AGAGGGATAAGGTACCTTTCACATAGAGATCATCCT...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR GCA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTGCTCAGACACCCTTTTaGTTGTGCCACAATATGAAC +
Preference number: 2 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPAQTPF*LCHNMN
Trigger: GTTCATATTGTGGCACAAGCAAAAGGGTGTCTGAGC...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CCA 90 bp GAGACCTGCAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATGATCTCTATTGGGAATTTTGCCCTTaGGGCCAGAGAAACATGGGT +
Preference number: 2 (lower is better)
Translates to: ETCKSWWLVPHAGKDDLYWEFCP*GQRNMG
Trigger: ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCA...ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CCA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCCCATCCCTTCTTATTTaGGGGCAGGGTTTTTCTATT +
Preference number: 2 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLPSLLI*GQGFSI
Trigger: AATAGAAAAACCCTGCCCCCAAATAAGAAGGGATGG...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR TCA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTTCATGCTGGAAAGGATaGTCTCTATGTGAAAGGTAC +
Preference number: 2 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPSCWKG*SLCERY
Trigger: GTACCTTTCACATAGAGATCATCCTTTCCAGCATGA...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CCA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCTTGTTTTGTGTGCATTaGGTCCATCATTTTGTGCCT +
Preference number: 2 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLLFCVH*VHHFVP
Trigger: AGGCACAAAATGATGGACCCAATGCACACAAAACAA...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGGGTAAGGGTGATGTGTaGCATTTGTTTTGTGTAATC +
Preference number: 2 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVGKGDV*HLFCVI
Trigger: GATTACACAAAACAAATGCCACACATCACCCTTACC...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR CAA 90 bp AGGTACCTTATCCCTCTTCTACAGACCAGGAAACTGAAGCTTGATTaGTCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTA +
Preference number: 2 (lower is better)
Translates to: RYLIPLLQTRKLKLD*SQATGVGVGIHPFL
Trigger: TAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGACAAATCAAGCTTCAGTTTCCTGGTCTGTAGAAGAGGGATAAGGTACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR TCA 90 bp GAGACCTGCAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATGATCTCTATGCTTGTGCCACAATATaGACAATATTCACCACCCTC +
Preference number: 2 (lower is better)
Translates to: ETCKSWWLVPHAGKDDLYACATI*TIFTTL
Trigger: GAGGGTGGTGAATATTGTTCATATTGTGGCACAAGC...ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR TCA 90 bp GAGACCTGCAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATGATCTCTATGAGAAGCCAAGCATTTaGGTTTTGACTCGATGCAGT +
Preference number: 2 (lower is better)
Translates to: ETCKSWWLVPHAGKDDLYEKPSI*VLTRCS
Trigger: ACTGCATCGAGTCAAAACTCAAATGCTTGGCTTCTC...ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR GCA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCACACCCTTTTGCTTGTaGCACAATATGAACAATATT +
Preference number: 2 (lower is better)
Translates to: EHFPGNFALGARETWVSVTPFCL*HNMNNI
Trigger: AATATTGTTCATATTGTGGCACAAGCAAAAGGGTGT...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR GCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGGGAAATATGTATTTCTaGTTCTCCATGAGATTGGAC +
Preference number: 2 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVGNMYF*FSMRLD
Trigger: GTCCAATCTCATGGAGAAGCAGAAATACATATTTCC...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CCA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTTTGTTTTGTGTGCATTaGGTCCATCATTTTGTGCCT +
Preference number: 2 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPLFCVH*VHHFVP
Trigger: AGGCACAAAATGATGGACCCAATGCACACAAAACAA...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGTCCATGAGATTGGACTaGAAGCTTCCATCTTATATA +
Preference number: 2 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVSMRLD*KLPSYI
Trigger: TATATAAGATGGAAGCTTCCAGTCCAATCTCATGGA...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CCA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCTCCATGAGATTGGACTaGAAGCTTCCATCTTATATA +
Preference number: 2 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLSMRLD*KLPSYI
Trigger: TATATAAGATGGAAGCTTCCAGTCCAATCTCATGGA...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR CAA 90 bp AGGCCCTGGTTTCCCCTCACTTTGAGGGCTCAGACACCCTTTTGCTaGTGCCACAATATGAACAATATTCACCACCCTCATTTAACTAAA +
Preference number: 2 (lower is better)
Translates to: RPWFPLTLRAQTPFC*CHNMNNIHHPHLTK
Trigger: TTTAGTTAAATGAGGGTGGTGAATATTGTTCATATTGTGGCACAAGCAAAAGGGTGTCTGAGCCCTCAAAGTGAGGGGAAACCAGGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR GCA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCACACCCTTTTGCTTGTaGCACAATATGAACAATATT +
Preference number: 2 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLTPFCL*HNMNNI
Trigger: AATATTGTTCATATTGTGGCACAAGCAAAAGGGTGT...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CCA 90 bp GAGACCTGCAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATGATCTCTATTACTGGAGTTGGGGTTaGAATCCATCCCTTCTTATT +
Preference number: 2 (lower is better)
Translates to: ETCKSWWLVPHAGKDDLYYWSWG*NPSLLI
Trigger: AATAAGAAGGGATGGATTCCAACCCCAACTCCAGTA...ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CCA 90 bp GAGACCTGCAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATGATCTCTATTTGTTTTGTGTGCATTaGGTCCATCATTTTGTGCCT +
Preference number: 2 (lower is better)
Translates to: ETCKSWWLVPHAGKDDLYLFCVH*VHHFVP
Trigger: AGGCACAAAATGATGGACCCAATGCACACAAAACAA...ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR GCA 90 bp GAGACCTGCAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATGATCTCTATACACCCTTTTGCTTGTaGCACAATATGAACAATATT +
Preference number: 2 (lower is better)
Translates to: ETCKSWWLVPHAGKDDLYTPFCL*HNMNNI
Trigger: AATATTGTTCATATTGTGGCACAAGCAAAAGGGTGT...ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CCA 90 bp TGTCATGTAAAGTCTGGGGGATCTATAATGACTAAAAGATTTGAGAGTCAGAGATTGTTTTGTGTGCATTaGGTCCATCATTTTGTGCCT +
Preference number: 2 (lower is better)
Translates to: CHVKSGGSIMTKRFESQRLFCVH*VHHFVP
Trigger: AGGCACAAAATGATGGACCCAATGCACACAAAACAA...TCTCTGACTCTCAAATCTTTTAGTCATTATAGATCCCCCAGACTTTACATGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR CAA 90 bp GTCTGGACGGGTGAATACAGGAATGACAATATTGATGTGGTTAGATaGGATGACTTTTTCTTTAGCATTATTACAATTGTTTTCGAGCTT +
Preference number: 2 (lower is better)
Translates to: VWTGEYRNDNIDVVR*DDFFFSIITIVFEL
Trigger: AAGCTCGAAAACAATTGTAATAATGCTAAAGAAAAAGTCATCCAATCTAACCACATCAATATTGTCATTCCTGTATTCACCCGTCCAGAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR CCA 72 bp CTGGGTGCCATCGTAAGAACCAGCCTCTTCTGTGTCTaGGCTATGCCACGCAGCAGCACCTGCAGGCTCTTC +
Preference number: 3 (lower is better)
Translates to: LGAIVRTSLFCV*AMPRSSTCRLF
Trigger: GAAGAGCCTGCAGGTGCTGCTGCGTGGCATAGCCCAGACACAGAAGAGGCTGGTTCTTACGATGGCACCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CAA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGGATGGGTGGAGTCCTTaGGGAAGGAGGAGGCAATGG +
Preference number: 3 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRDGWSP*GRRRQW
Trigger: CCATTGCCTCCTCCTTCCCAAAGGACTCCACCCATC...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CAA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGGATGGGTGGAGTCCTTaGGGAAGGAGGAGGCAATGG +
Preference number: 3 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVDGWSP*GRRRQW
Trigger: CCATTGCCTCCTCCTTCCCAAAGGACTCCACCCATC...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CAA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGTGTCAGCACCACAACTaGGGCACAGCACAGCAGTGC +
Preference number: 3 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVCQHHN*GTAQQC
Trigger: GCACTGCTGTGCTGTGCCCAAGTTGTGGTGCTGACA...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CAA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCTGTCAGCACCACAACTaGGGCACAGCACAGCAGTGC +
Preference number: 3 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLCQHHN*GTAQQC
Trigger: GCACTGCTGTGCTGTGCCCAAGTTGTGGTGCTGACA...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR GCA 72 bp GGCTATCACTCTGTAGACTTGGGAGTGCTCACTGGGTaGCATCGTAAGAACCAGCCTCTTCTGTGTCTGGGC +
Preference number: 3 (lower is better)
Translates to: GYHSVDLGVLTG*HRKNQPLLCLG
Trigger: GCCCAGACACAGAAGAGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CAA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTGGGAATTTTGCCCTaGGGGCCAGAGAAACATGGG +
Preference number: 3 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVLGILP*GPEKHG
Trigger: CCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAG...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CAA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCCCAAGCTACTGGAGTaGGGGTTGGAATCCATCCCT +
Preference number: 3 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVPKLLE*GLESIP
Trigger: AGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGG...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR CCA 72 bp AGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTaGTTTCCCCTCACTTTGAGGGCTCAGACACCCTTT +
Preference number: 3 (lower is better)
Translates to: SQREGILAWLRP*FPLTLRAQTPF
Trigger: AAAGGGTGTCTGAGCCCTCAAAGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CAA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGTGGTTTCCCCTCACTTaGAGGGCTCAGACACCCTTT +
Preference number: 3 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVWFPLT*RAQTPF
Trigger: AAAGGGTGTCTGAGCCCTCAAAGTGAGGGGAAACCA...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CAA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTCTGGGAATTTTGCCCTaGGGGCCAGAGAAACATGGG +
Preference number: 3 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPLGILP*GPEKHG
Trigger: CCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAG...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CAA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGGCAATGGGGAATCTATaGGTAGGACCCCATGGTGGA +
Preference number: 3 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRAMGNL*VGPHGG
Trigger: TCCACCATGGGGTCCTACCAATAGATTCCCCATTGC...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CAA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTCCCAAGCTACTGGAGTaGGGGTTGGAATCCATCCCT +
Preference number: 3 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPPKLLE*GLESIP
Trigger: AGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGG...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CAA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGAGGCTCTTCCAAGCTTaGTCAGCACCACAACTTGGG +
Preference number: 3 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVRLFQA*SAPQLG
Trigger: CCCAAGTTGTGGTGCTGACAAAGCTTGGAAGAGCCT...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR CCA 72 bp GACTGGGAGGGGATATTCAAGGCAGTCCAGGAGAGTTaGGTTACGGAAGGCTATCACTCTGTAGACTTGGGA +
Preference number: 3 (lower is better)
Translates to: DWEGIFKAVQES*VTEGYHSVDLG
Trigger: TCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGCCTTGAATATCCCCTCCCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CAA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTCACTCTAGGGTTGTTTaGTGTGCATTGGGTCCATCA +
Preference number: 3 (lower is better)
Translates to: ESQREGILAWLRPWFPLTHSRVV*CALGPS
Trigger: TGATGGACCCAATGCACACAAAACAACCCTAGAGTG...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CAA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCCACTCTAGGGTTGTTTaGTGTGCATTGGGTCCATCA +
Preference number: 3 (lower is better)
Translates to: EHFPGNFALGARETWVSVHSRVV*CALGPS
Trigger: TGATGGACCCAATGCACACAAAACAACCCTAGAGTG...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CAA 90 bp ATAACAGCACCTTCCAGGGATGGGCACCTGATACAAACTTGGCCTATCAGAGCACTGGGAATTTTGCCCTaGGGGCCAGAGAAACATGGG +
Preference number: 3 (lower is better)
Translates to: ITAPSRDGHLIQTWPIRALGILP*GPEKHG
Trigger: CCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAG...TGCTCTGATAGGCCAAGTTTGTATCAGGTGCCCATCCCTGGAAGGTGCTGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CAA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTGCAATGGGGAATCTATaGGTAGGACCCCATGGTGGA +
Preference number: 3 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPAMGNL*VGPHGG
Trigger: TCCACCATGGGGTCCTACCAATAGATTCCCCATTGC...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CAA 90 bp GAGACCTGCAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATGATCTCTATGATGGGTGGAGTCCTTaGGGAAGGAGGAGGCAATGG +
Preference number: 3 (lower is better)
Translates to: ETCKSWWLVPHAGKDDLYDGWSP*GRRRQW
Trigger: CCATTGCCTCCTCCTTCCCAAAGGACTCCACCCATC...ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CAA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCCTACTGGAGTTGGGGTaGGAATCCATCCCTTCTTAT +
Preference number: 3 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLLLELG*ESIPSY
Trigger: ATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAG...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR CCA 72 bp CACCTGATACAAACTTGGCCTATCAGAGCACTTCCCTaGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGT +
Preference number: 3 (lower is better)
Translates to: HLIQTWPIRALP*EFCPWGQRNMG
Trigger: ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGGCCAAGTTTGTATCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR CCA 72 bp TATCCCTTCCCCATGGATAACAGCACCTTCCAGGGATaGGCACCTGATACAAACTTGGCCTATCAGAGCACT +
Preference number: 3 (lower is better)
Translates to: YPFPMDNSTFQG*APDTNLAYQST
Trigger: AGTGCTCTGATAGGCCAAGTTTGTATCAGGTGCCCATCCCTGGAAGGTGCTGTTATCCATGGGGAAGGGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CAA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCTCCATCCCTTCTTATTaGGGGGCAGGGTTTTTCTAT +
Preference number: 3 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLSIPSY*GAGFFY
Trigger: ATAGAAAAACCCTGCCCCCAAATAAGAAGGGATGGA...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR GCA 72 bp TTCTATTTCCCTTACTGGCCTGGGAGCAGGTGGAGATaGATGAGGTCATATGGAAGAGACAGGCTGATAGGA +
Preference number: 3 (lower is better)
Translates to: FYFPYWPGSRWR*MRSYGRDRLIG
Trigger: TCCTATCAGCCTGTCTCTTCCATATGACCTCATGCATCTCCACCTGCTCCCAGGCCAGTAAGGGAAATAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR CCA 72 bp GGACTGGAAGCTTCCATCTTATATATCCCTTCCCCATaGATAACAGCACCTTCCAGGGATGGGCACCTGATA +
Preference number: 3 (lower is better)
Translates to: GLEASILYIPSP*ITAPSRDGHLI
Trigger: TATCAGGTGCCCATCCCTGGAAGGTGCTGTTATCCATGGGGAAGGGATATATAAGATGGAAGCTTCCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CAA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCCAGACACCCTTTTGCTaGTGCCACAATATGAACAAT +
Preference number: 3 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLQTPFC*CHNMNN
Trigger: ATTGTTCATATTGTGGCACAAGCAAAAGGGTGTCTG...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR CCA 72 bp GAGGCAGACAAAAGGGTTGAGACCTGCAAGAGTTGGTaGCTAGTTCCTCATGCTGGAAAGGATGATCTCTAT +
Preference number: 3 (lower is better)
Translates to: EADKRVETCKSW*LVPHAGKDDLY
Trigger: ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTCAACCCTTTTGTCTGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CAA 90 bp ATAACAGCACCTTCCAGGGATGGGCACCTGATACAAACTTGGCCTATCAGAGCAGTTGTTTTGTGTGCATaGGGTCCATCATTTTGTGCC +
Preference number: 3 (lower is better)
Translates to: ITAPSRDGHLIQTWPIRAVVLCA*GPSFCA
Trigger: GGCACAAAATGATGGACCCAATGCACACAAAACAAC...TGCTCTGATAGGCCAAGTTTGTATCAGGTGCCCATCCCTGGAAGGTGCTGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CAA 90 bp ATAACAGCACCTTCCAGGGATGGGCACCTGATACAAACTTGGCCTATCAGAGCAAACAACACTCTAGGGTaGTTTTGTGTGCATTGGGTC +
Preference number: 3 (lower is better)
Translates to: ITAPSRDGHLIQTWPIRANNTLG*FCVHWV
Trigger: GACCCAATGCACACAAAACAACCCTAGAGTGTTGTT...TGCTCTGATAGGCCAAGTTTGTATCAGGTGCCCATCCCTGGAAGGTGCTGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CAA 90 bp GAGACCTGCAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATGATCTCTATCTACTGGAGTTGGGGTaGGAATCCATCCCTTCTTAT +
Preference number: 3 (lower is better)
Translates to: ETCKSWWLVPHAGKDDLYLLELG*ESIPSY
Trigger: ATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAG...ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CAA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTAAACTGAAGCTTGATTaGTCCCAAGCTACTGGAGTT +
Preference number: 3 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPKLKLD*SQATGV
Trigger: AACTCCAGTAGCTTGGGACAAATCAAGCTTCAGTTT...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CAA 90 bp GAGACCTGCAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATGATCTCTATGTTGTTTTGTGTGCATaGGGTCCATCATTTTGTGCC +
Preference number: 3 (lower is better)
Translates to: ETCKSWWLVPHAGKDDLYVVLCA*GPSFCA
Trigger: GGCACAAAATGATGGACCCAATGCACACAAAACAAC...ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CAA 90 bp GAGACCTGCAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATGATCTCTATAACAACACTCTAGGGTaGTTTTGTGTGCATTGGGTC +
Preference number: 3 (lower is better)
Translates to: ETCKSWWLVPHAGKDDLYNNTLG*FCVHWV
Trigger: GACCCAATGCACACAAAACAACCCTAGAGTGTTGTT...ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CAA 90 bp ATAACAGCACCTTCCAGGGATGGGCACCTGATACAAACTTGGCCTATCAGAGCACAGACACCCTTTTGCTaGTGCCACAATATGAACAAT +
Preference number: 3 (lower is better)
Translates to: ITAPSRDGHLIQTWPIRAQTPFC*CHNMNN
Trigger: ATTGTTCATATTGTGGCACAAGCAAAAGGGTGTCTG...TGCTCTGATAGGCCAAGTTTGTATCAGGTGCCCATCCCTGGAAGGTGCTGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CAA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGTGTGTGGCATTTGTTTaGTGTAATCAGAATAGTACC +
Preference number: 3 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRCVAFV*CNQNST
Trigger: GGTACTATTCTGATTACACAAAACAAATGCCACACA...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CAA 90 bp GAGACCTGCAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATGATCTCTATCAGACACCCTTTTGCTaGTGCCACAATATGAACAAT +
Preference number: 3 (lower is better)
Translates to: ETCKSWWLVPHAGKDDLYQTPFC*CHNMNN
Trigger: ATTGTTCATATTGTGGCACAAGCAAAAGGGTGTCTG...ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR GCA 72 bp CCCCTCACTTTGAGGGCTCAGACACCCTTTTGCTTGTaGCACAATATGAACAATATTCACCACCCTCATTTA +
Preference number: 3 (lower is better)
Translates to: PLTLRAQTPFCL*HNMNNIHHPHL
Trigger: TAAATGAGGGTGGTGAATATTGTTCATATTGTGGCACAAGCAAAAGGGTGTCTGAGCCCTCAAAGTGAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR TCA 72 bp CAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATaGTCTCTATGTGAAAGGTACCTTATCCCTCTTCTA +
Preference number: 3 (lower is better)
Translates to: QELVASSSCWKG*SLCERYLIPLL
Trigger: TAGAAGAGGGATAAGGTACCTTTCACATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CAA 90 bp TGTCATGTAAAGTCTGGGGGATCTATAATGACTAAAAGATTTGAGAGTCAGAGATGGTTTCCCCTCACTTaGAGGGCTCAGACACCCTTT +
Preference number: 3 (lower is better)
Translates to: CHVKSGGSIMTKRFESQRWFPLT*RAQTPF
Trigger: AAAGGGTGTCTGAGCCCTCAAAGTGAGGGGAAACCA...TCTCTGACTCTCAAATCTTTTAGTCATTATAGATCCCCCAGACTTTACATGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR TCA 72 bp GTACATTACGATTGCAACTCTAAACATGTGAGAGTGTaGACAAGGTCTGGACGGGTGAATACAGGAATGACA +
Preference number: 3 (lower is better)
Translates to: VHYDCNSKHVRV*TRSGRVNTGMT
Trigger: TGTCATTCCTGTATTCACCCGTCCAGACCTTGTTCACACTCTCACATGTTTAGAGTTGCAATCGTAATGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR GCA 72 bp TACCCACCCATCCAACTTCTTGGAAATATGTATTTCTaGTTCTCCATGAGATTGGACTGGAAGCTTCCATCT +
Preference number: 3 (lower is better)
Translates to: YPPIQLLGNMYF*FSMRLDWKLPS
Trigger: AGATGGAAGCTTCCAGTCCAATCTCATGGAGAAGCAGAAATACATATTTCCAAGAAGTTGGATGGGTGGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR CCA 72 bp GGAAATATGTATTTCTGCTTCTCCATGAGATTGGACTaGAAGCTTCCATCTTATATATCCCTTCCCCATGGA +
Preference number: 3 (lower is better)
Translates to: GNMYFCFSMRLD*KLPSYISLPHG
Trigger: TCCATGGGGAAGGGATATATAAGATGGAAGCTTCCAGTCCAATCTCATGGAGAAGCAGAAATACATATTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CAA 90 bp TGTCATGTAAAGTCTGGGGGATCTATAATGACTAAAAGATTTGAGAGTCAGAGAGTTGTTTTGTGTGCATaGGGTCCATCATTTTGTGCC +
Preference number: 3 (lower is better)
Translates to: CHVKSGGSIMTKRFESQRVVLCA*GPSFCA
Trigger: GGCACAAAATGATGGACCCAATGCACACAAAACAAC...TCTCTGACTCTCAAATCTTTTAGTCATTATAGATCCCCCAGACTTTACATGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR-3UTR CAA 90 bp TGTCATGTAAAGTCTGGGGGATCTATAATGACTAAAAGATTTGAGAGTCAGAGAAACAACACTCTAGGGTaGTTTTGTGTGCATTGGGTC +
Preference number: 3 (lower is better)
Translates to: CHVKSGGSIMTKRFESQRNNTLG*FCVHWV
Trigger: GACCCAATGCACACAAAACAACCCTAGAGTGTTGTT...TCTCTGACTCTCAAATCTTTTAGTCATTATAGATCCCCCAGACTTTACATGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCGGGGCTGCAGTGCAGTaGTGCGGGCTTGGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLGAAVQ*CGLGGL
Trigger: CAGGCCACCAAGCCCGCAGCACTGCACTGCAGCCCC...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541347.5
CDS-3UTR GCA 90 bp CCTATCAGAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGACAGAGCTGGGGGCTaGAGTGCAGTGCTGCGGGCT +
Preference number: 4 (lower is better)
Translates to: PIRALPWEFCPWGQRNMGDRAGG*SAVLRA
Trigger: AGCCCGCAGCACTGCACTGCAGCCCCCAGCTCTGTC...ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000541347.5
CDS-3UTR CCA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTACCCCAGGACAGAGCTaGGGGCTGCAGTGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: ESQREGILAWLRPWFPLTTPGQS*GLQCSA
Trigger: AGCACTGCACTGCAGCCCCCAGCTCTGTCCTGGGGT...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000541347.5
CDS-3UTR TCA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCCCGTCTCAGTCACACTaGGGGCCAGCCTCAGATCCT +
Preference number: 4 (lower is better)
Translates to: EHFPGNFALGARETWVSVPSQSH*GPASDP
Trigger: AGGATCTGAGGCTGGCCCTCAGTGTGACTGAGACGG...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTGGAACTGATCCATGGTaGAGGCCTGGCGTGGACTGC +
Preference number: 4 (lower is better)
Translates to: ESQREGILAWLRPWFPLTGTDPW*RPGVDC
Trigger: GCAGTCCACGCCAGGCCTTCACCATGGATCAGTTCC...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399220.3
CDS-3UTR GCA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCAGATGGGCAGGGGCTTaGCACAAGGTGACTGGGAGG +
Preference number: 4 (lower is better)
Translates to: EHFPGNFALGARETWVSVRWAGA*HKVTGR
Trigger: CCTCCCAGTCACCTTGTGGCAAGCCCCTGCCCATCT...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTGCGGGCTTGGTGGCCTaGTCATGGTGGAAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: ESQREGILAWLRPWFPLTAGLVA*SWWKKS
Trigger: GGACTTCTTCCACCATGAGCAGGCCACCAAGCCCGC...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541347.5
CDS-3UTR GCA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTGCTGCAGTGCAGTGCTaGGGGCTTGGTGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPAAVQC*GLGGLL
Trigger: GAGCAGGCCACCAAGCCCGCAGCACTGCACTGCAGC...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541347.5
CDS-3UTR CCA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTCGGTCCGGTTGTTCATaGAGTTGGCGGCCAGGACGA +
Preference number: 4 (lower is better)
Translates to: ESQREGILAWLRPWFPLTRSGCS*SWRPGR
Trigger: TCGTCCTGGCCGCCAACTCCATGAACAACCGGACCG...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGCCGTCTCAGTCACACTaGGGGCCAGCCTCAGATCCT +
Preference number: 4 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRPSQSH*GPASDP
Trigger: AGGATCTGAGGCTGGCCCTCAGTGTGACTGAGACGG...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTGAAATCAACGTGGACTaGGCGCCCACACAGGACAGC +
Preference number: 4 (lower is better)
Translates to: ESQREGILAWLRPWFPLTEINVD*APTQDS
Trigger: GCTGTCCTGTGTGGGCGCTCAGTCCACGTTGATTTC...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCCTGATGGTGACGCCATaGTGCACGGTCCGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: EHFPGNFALGARETWVSVLMVTP*CTVRLF
Trigger: GAACAACCGGACCGTGCAGCATGGCGTCACCATCAG...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCGCAGTGGGGAGCCCTTaGAGGTTTGGGGACATGATG +
Preference number: 4 (lower is better)
Translates to: EHFPGNFALGARETWVSVAVGSP*RFGDMM
Trigger: CATCATGTCCCCAAACCTGCAAGGGCTCCCCACTGC...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCCCACGCAGCAGCACCTaGAGGCTCTTCCAAGCTTTG +
Preference number: 4 (lower is better)
Translates to: EHFPGNFALGARETWVSVPRSST*RLFQAL
Trigger: CAAAGCTTGGAAGAGCCTGCAGGTGCTGCTGCGTGG...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTCCACGCAGCAGCACCTaGAGGCTCTTCCAAGCTTTG +
Preference number: 4 (lower is better)
Translates to: ESQREGILAWLRPWFPLTPRSST*RLFQAL
Trigger: CAAAGCTTGGAAGAGCCTGCAGGTGCTGCTGCGTGG...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTTCTGTGTCTGGGCTATaGCACGCAGCAGCACCTGCA +
Preference number: 4 (lower is better)
Translates to: ESQREGILAWLRPWFPLTSVSGL*HAAAPA
Trigger: TGCAGGTGCTGCTGCGTGGCATAGCCCAGACACAGA...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCTCTGTGTCTGGGCTATaGCACGCAGCAGCACCTGCA +
Preference number: 4 (lower is better)
Translates to: EHFPGNFALGARETWVSVSVSGL*HAAAPA
Trigger: TGCAGGTGCTGCTGCGTGGCATAGCCCAGACACAGA...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGAGGCCTGGCGTGGACTaGCAAGGGAACCTCTGGATC +
Preference number: 4 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVRPGVD*QGNLWI
Trigger: GATCCAGAGGTTCCCTTGGCAGTCCACGCCAGGCCT...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399220.3
CDS-3UTR CCA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGCGGTCCGGTTGTTCATaGAGTTGGCGGCCAGGACGA +
Preference number: 4 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRRSGCS*SWRPGR
Trigger: TCGTCCTGGCCGCCAACTCCATGAACAACCGGACCG...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCGTCAGCACCACAACTTaGGCACAGCACAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: EHFPGNFALGARETWVSVVSTTT*AQHSSA
Trigger: GGCACTGCTGTGCTGTGCCCAAGTTGTGGTGCTGAC...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGGTGCTGCGGGCTTGGTaGCCTGCTCATGGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVVLRAW*PAHGGR
Trigger: TCTTCCACCATGAGCAGGCCACCAAGCCCGCAGCAC...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541347.5
CDS-3UTR CCA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCGCCCAGAGTACTCACTaGACCACACTGGGGCACACA +
Preference number: 4 (lower is better)
Translates to: EHFPGNFALGARETWVSVAQSTH*TTLGHT
Trigger: TGTGTGCCCCAGTGTGGTCCAGTGAGTACTCTGGGC...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542107.5
CDS-3UTR CCA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTAGCTGGGAGAGCTCATaGGGCCCTCAGCTTCCCTGC +
Preference number: 4 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPSWESS*GPQLPC
Trigger: GCAGGGAAGCTGAGGGCCCCATGAGCTCTCCCAGCT...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542107.5
CDS-3UTR CCA 90 bp CCTATCAGAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGAGCCTTCAGGAAGCTaGGAGAGCTCATGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: PIRALPWEFCPWGQRNMGEPSGS*ESSWGP
Trigger: AGGGCCCCATGAGCTCTCCCAGCTTCCTGAAGGCTC...ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542107.5
CDS-3UTR CCA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGGCCCCAACCTGGAGGTaGGGGGCAGGGAGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: QHSRVVLCALGPSFCACKAPTWR*GAGSRP
Trigger: GGGCCTGCTCCCTGCCCCCCACCTCCAGGTTGGGGC...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000542107.5
CDS-3UTR TCA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTCCGTCTCAGTCACACTaGGGGCCAGCCTCAGATCCT +
Preference number: 4 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPPSQSH*GPASDP
Trigger: AGGATCTGAGGCTGGCCCTCAGTGTGACTGAGACGG...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGGAAATCAACGTGGACTaGGCGCCCACACAGGACAGC +
Preference number: 4 (lower is better)
Translates to: SQATGVGVGIHPFLFGGREINVD*APTQDS
Trigger: GCTGTCCTGTGTGGGCGCTCAGTCCACGTTGATTTC...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp CCTATCAGAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGAAATCAACGTGGACTaGGCGCCCACACAGGACAGC +
Preference number: 4 (lower is better)
Translates to: PIRALPWEFCPWGQRNMGEINVD*APTQDS
Trigger: GCTGTCCTGTGTGGGCGCTCAGTCCACGTTGATTTC...ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCGGAACTGATCCATGGTaGAGGCCTCTAGTCGCTGTG +
Preference number: 4 (lower is better)
Translates to: EHFPGNFALGARETWVSVGTDPW*RPLVAV
Trigger: CACAGCGACTAGAGGCCTTCACCATGGATCAGTTCC...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541347.5
CDS-3UTR GCA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTATGGTGACGCCATGCTaGACGGTCCGGTTGTTCATG +
Preference number: 4 (lower is better)
Translates to: ESQREGILAWLRPWFPLTMVTPC*TVRLFM
Trigger: CATGAACAACCGGACCGTGCAGCATGGCGTCACCAT...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTGATGGTGACGCCATaGTGCACGGTCCGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVLMVTP*CTVRLF
Trigger: GAACAACCGGACCGTGCAGCATGGCGTCACCATCAG...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCCATGAACTGGGGTGCTaGCACCAAAATGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: EHFPGNFALGARETWVSVHELGC*HQNGCC
Trigger: GCAGCAGCCATTTTGGTGGCAGCACCCCAGTTCATG...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp CCTATCAGAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGCAGTGGGGAGCCCTTaGAGGTTTGGGGACATGATG +
Preference number: 4 (lower is better)
Translates to: PIRALPWEFCPWGQRNMGAVGSP*RFGDMM
Trigger: CATCATGTCCCCAAACCTGCAAGGGCTCCCCACTGC...ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp CCTATCAGAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTCCACGCAGCAGCACCTaGAGGCTCTTCCAAGCTTTG +
Preference number: 4 (lower is better)
Translates to: PIRALPWEFCPWGQRNMGPRSST*RLFQAL
Trigger: CAAAGCTTGGAAGAGCCTGCAGGTGCTGCTGCGTGG...ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCCACGCAGCAGCACCTaGAGGCTCTTCCAAGCTTTG +
Preference number: 4 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVPRSST*RLFQAL
Trigger: CAAAGCTTGGAAGAGCCTGCAGGTGCTGCTGCGTGG...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTAGATGGGCAGGGGCTTaGCACAAGGTGACTGGGAGG +
Preference number: 4 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPRWAGA*HKVTGR
Trigger: CCTCCCAGTCACCTTGTGGCAAGCCCCTGCCCATCT...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp GAGACCTGCAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATGATCTCTATAGCTGGGGGCTGCAGTaGAGTGCTGCGGGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: ETCKSWWLVPHAGKDDLYSWGLQ*SAAGLV
Trigger: CACCAAGCCCGCAGCACTGCACTGCAGCCCCCAGCT...ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541347.5
CDS-3UTR CCA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCGGGGTTCTCTCATCCTaGTTTAAGTCCACGGCCTGG +
Preference number: 4 (lower is better)
Translates to: EHFPGNFALGARETWVSVGVLSS*FKSTAW
Trigger: CCAGGCCGTGGACTTAAACCAGGATGAGAGAACCCC...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358309.3
CDS-3UTR CCA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGGGTTGTTCATGGAGTTaGCGGCCAGGACGATGGCCA +
Preference number: 4 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRGCSWS*RPGRWP
Trigger: TGGCCATCGTCCTGGCCGCCAACTCCATGAACAACC...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCGAGGAGAAATCAACGTaGACTGAGCGCCCACACAGG +
Preference number: 4 (lower is better)
Translates to: EHFPGNFALGARETWVSVEEKST*TERPHR
Trigger: CCTGTGTGGGCGCTCAGTCCACGTTGATTTCTCCTC...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGGTCAGCACCACAACTTaGGCACAGCACAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRVSTTT*AQHSSA
Trigger: GGCACTGCTGTGCTGTGCCCAAGTTGTGGTGCTGAC...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGTGCCAAGGGAACCTCTaGATCTGCCAGTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVCQGNL*ICQSAT
Trigger: GGTGGCTGACTGGCAGATCCAGAGGTTCCCTTGGCA...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399220.3
CDS-3UTR CCA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCTCCATGGTGAAGGCCTaGCGTGGACTGCCAAGGGAA +
Preference number: 4 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLSMVKA*RGLPRE
Trigger: TTCCCTTGGCAGTCCACGCCAGGCCTTCACCATGGA...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399220.3
CDS-3UTR TCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGGGGCTTGCCACAAGGTaGCTGGGAGGGGATATTCAA +
Preference number: 4 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVGLATR*LGGDIQ
Trigger: TTGAATATCCCCTCCCAGTCACCTTGTGGCAAGCCC...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCATGGTGACGCCATGCTaGACGGTCCGGTTGTTCATG +
Preference number: 4 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLMVTPC*TVRLFM
Trigger: CATGAACAACCGGACCGTGCAGCATGGCGTCACCAT...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGATGGTGACGCCATGCTaGACGGTCCGGTTGTTCATG +
Preference number: 4 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVMVTPC*TVRLFM
Trigger: CATGAACAACCGGACCGTGCAGCATGGCGTCACCAT...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGATGGTGACGCCATGCTaGACGGTCCGGTTGTTCATG +
Preference number: 4 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRMVTPC*TVRLFM
Trigger: CATGAACAACCGGACCGTGCAGCATGGCGTCACCAT...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCGAACATGAACTGGGGTaGTGCCACCAAAATGGCTGC +
Preference number: 4 (lower is better)
Translates to: EHFPGNFALGARETWVSVEHELG*CHQNGC
Trigger: GCAGCCATTTTGGTGGCAGCACCCCAGTTCATGTTC...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGGGCACAGCACAGCAGTaGCAGGTGTGGAAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRGTAQQ*QVWKAE
Trigger: TTCTGCTTTCCACACCTGGCACTGCTGTGCTGTGCC...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCGGAGTGCTCACTGGGTaGCATCGTAAGAACCAGCCT +
Preference number: 4 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLGVLTG*HRKNQP
Trigger: AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCC...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGGGAGTGCTCACTGGGTaGCATCGTAAGAACCAGCCT +
Preference number: 4 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVGVLTG*HRKNQP
Trigger: AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCC...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTTTGGCCACCTTTCCCTaGCTTTGGCCAGAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPLATFP*LWPEGH
Trigger: GTGGCCTTCTGGCCAAAGGCAGGGAAAGGTGGCCAA...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541347.5
CDS-3UTR GCA 90 bp GAGACCTGCAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATGATCTCTATTCCGAGGACAGCGGGTaGTCTGTGTGCTCCCCACCT +
Preference number: 4 (lower is better)
Translates to: ETCKSWWLVPHAGKDDLYSEDSG*SVCSPP
Trigger: AGGTGGGGAGCACACAGAGCACCCGCTGTCCTCGGA...ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541347.5
CDS-3UTR GCA 90 bp ATAACAGCACCTTCCAGGGATGGGCACCTGATACAAACTTGGCCTATCAGAGCAGCAGGGAGCAGGCCCTaGAGTCAGCAAAGCACAGCA +
Preference number: 4 (lower is better)
Translates to: ITAPSRDGHLIQTWPIRAAGSRP*SQQSTA
Trigger: TGCTGTGCTTTGCTGACTGCAGGGCCTGCTCCCTGC...TGCTCTGATAGGCCAAGTTTGTATCAGGTGCCCATCCCTGGAAGGTGCTGTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542107.5
CDS-3UTR CCA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTGGTTGTTCATGGAGTTaGCGGCCAGGACGATGGCCA +
Preference number: 4 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPGCSWS*RPGRWP
Trigger: TGGCCATCGTCCTGGCCGCCAACTCCATGAACAACC...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCGAGGAGAAATCAACGTaGACTGAGCGCCCACACAGG +
Preference number: 4 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLEEKST*TERPHR
Trigger: CCTGTGTGGGCGCTCAGTCCACGTTGATTTCTCCTC...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCGAGGGAATTCTAGCTTaGCTCAGGCCCTGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLEGILA*LRPWFP
Trigger: GGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTC...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTATCAGAGCACTTCCCTaGGAATTTTGCCCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: ESQREGILAWLRPWFPLTIRALP*EFCPWG
Trigger: GCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGAT...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCGAGCCCTTGCAGGTTTaGGGACATGATGGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLEPLQV*GHDGRG
Trigger: CCCTCTTCCATCATGTCCCCAAACCTGCAAGGGCTC...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp CCTATCAGAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGAGCCCTTGCAGGTTTaGGGACATGATGGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: PIRALPWEFCPWGQRNMGEPLQV*GHDGRG
Trigger: CCCTCTTCCATCATGTCCCCAAACCTGCAAGGGCTC...ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGGGTAGGACCCCATGGTaGACGTATGAGAAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRGRTPW*TYEKPS
Trigger: GCTTGGCTTCTCATACGTCCACCATGGGGTCCTACC...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCTTTCCCTTACTGGCCTaGGAGCAGGTGGAGATGCAT +
Preference number: 4 (lower is better)
Translates to: EHFPGNFALGARETWVSVFPLLA*EQVEMH
Trigger: ATGCATCTCCACCTGCTCCCAGGCCAGTAAGGGAAA...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTGTCAGCACCACAACTTaGGCACAGCACAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPVSTTT*AQHSSA
Trigger: GGCACTGCTGTGCTGTGCCCAAGTTGTGGTGCTGAC...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTAGCCTCTTCTGTGTCTaGGCTATGCCACGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPSLFCV*AMPRSS
Trigger: GCTGCTGCGTGGCATAGCCCAGACACAGAAGAGGCT...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTGCAGTCCAGGAGAGTTaGGTTACGGAAGGCTATCAC +
Preference number: 4 (lower is better)
Translates to: ESQREGILAWLRPWFPLTAVQES*VTEGYH
Trigger: GTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCGCAGTCCAGGAGAGTTaGGTTACGGAAGGCTATCAC +
Preference number: 4 (lower is better)
Translates to: EHFPGNFALGARETWVSVAVQES*VTEGYH
Trigger: GTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp ATAACAGCACCTTCCAGGGATGGGCACCTGATACAAACTTGGCCTATCAGAGCAGGTGAAGGCCTGGCGTaGACTGCCAAGGGAACCTCT +
Preference number: 4 (lower is better)
Translates to: ITAPSRDGHLIQTWPIRAGEGLA*TAKGTS
Trigger: AGAGGTTCCCTTGGCAGTCCACGCCAGGCCTTCACC...TGCTCTGATAGGCCAAGTTTGTATCAGGTGCCCATCCCTGGAAGGTGCTGTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399220.3
CDS-3UTR CCA 90 bp CCTATCAGAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTGGCCTGCTCATGGTaGAAGAAGTCCACCAGCAGT +
Preference number: 4 (lower is better)
Translates to: PIRALPWEFCPWGQRNMGVACSW*KKSTSS
Trigger: ACTGCTGGTGGACTTCTTCCACCATGAGCAGGCCAC...ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541347.5
CDS-3UTR CCA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCTTGGTGGCCTGCTCATaGTGGAAGAAGTCCACCAGC +
Preference number: 4 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLLVACS*WKKSTS
Trigger: GCTGGTGGACTTCTTCCACCATGAGCAGGCCACCAA...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541347.5
CDS-3UTR CCA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGCTCACTGGACCACACTaGGGCACACACAGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRLTGPH*GTHSSS
Trigger: AGAAGAGCTGTGTGTGCCCCAGTGTGGTCCAGTGAG...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542107.5
CDS-3UTR TCA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCCCAGAGAGCTCTTCCTaGAATCCAAGTCTGCCAACT +
Preference number: 4 (lower is better)
Translates to: EHFPGNFALGARETWVSVPESSS*NPSLPT
Trigger: AGTTGGCAGACTTGGATTTCAGGAAGAGCTCTCTGG...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358309.3
CDS-3UTR TCA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGACTGATTCAGGGAACTaGTCCATGGTGAAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRTDSGN*SMVKAP
Trigger: TGGGGCCTTCACCATGGATCAGTTCCCTGAATCAGT...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358309.3
ENST00000542107.5
CDS-3UTR TCA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTGCTTCTTGCTGTTGGTaGGGGCAAACACTACCAACA +
Preference number: 4 (lower is better)
Translates to: ESQREGILAWLRPWFPLTASCCW*GQTLPT
Trigger: TGTTGGTAGTGTTTGCCCTCACCAACAGCAAGAAGC...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGGGAGGTAAATGTCGGTaGCACTCTTGGGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVGGKCR*HSWASC
Trigger: GCAAGAAGCCCAAGAGTGTCACCGACATTTACCTCC...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTCCCATGGTGGACGTATaGGAAGCCAAGCATTTGAGT +
Preference number: 4 (lower is better)
Translates to: ESQREGILAWLRPWFPLTPMVDV*EAKHLS
Trigger: ACTCAAATGCTTGGCTTCTCATACGTCCACCATGGG...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGACTGATTCAGGGAACTaGTCCATGGTGAAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRTDSGN*SMVKAW
Trigger: CCAGGCCTTCACCATGGATCAGTTCCCTGAATCAGT...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399220.3
CDS-3UTR GCA 90 bp ATAACAGCACCTTCCAGGGATGGGCACCTGATACAAACTTGGCCTATCAGAGCACTGATGGTGACGCCATaGTGCACGGTCCGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: ITAPSRDGHLIQTWPIRALMVTP*CTVRLF
Trigger: GAACAACCGGACCGTGCAGCATGGCGTCACCATCAG...TGCTCTGATAGGCCAAGTTTGTATCAGGTGCCCATCCCTGGAAGGTGCTGTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGGAACATGAACTGGGGTaGTGCCACCAAAATGGCTGC +
Preference number: 4 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVEHELG*CHQNGC
Trigger: GCAGCCATTTTGGTGGCAGCACCCCAGTTCATGTTC...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTTCCCTGGGAATTTTaGCCTTGGGGCCAGAGAAAC +
Preference number: 4 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVLPWEF*PWGQRN
Trigger: GTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAG...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCCTTCCCTGGGAATTTTaGCCTTGGGGCCAGAGAAAC +
Preference number: 4 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLLPWEF*PWGQRN
Trigger: GTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAG...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTGGGAGCAGGTGGAGATaGATGAGGTCATATGGAAGA +
Preference number: 4 (lower is better)
Translates to: ESQREGILAWLRPWFPLTGSRWR*MRSYGR
Trigger: TCTTCCATATGACCTCATGCATCTCCACCTGCTCCC...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGAGCGGGTGCTCTGTGTaGTCCCCACCTTGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: QHSRVVLCALGPSFCACKSGCSV*SPPCPS
Trigger: GGAGGGGCAAGGTGGGGAGCACACAGAGCACCCGCT...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000541347.5
CDS-3UTR CCA 90 bp ATAACAGCACCTTCCAGGGATGGGCACCTGATACAAACTTGGCCTATCAGAGCAGGTTGTTCATGGAGTTaGCGGCCAGGACGATGGCCA +
Preference number: 4 (lower is better)
Translates to: ITAPSRDGHLIQTWPIRAGCSWS*RPGRWP
Trigger: TGGCCATCGTCCTGGCCGCCAACTCCATGAACAACC...TGCTCTGATAGGCCAAGTTTGTATCAGGTGCCCATCCCTGGAAGGTGCTGTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GAGACCTGCAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATGATCTCTATCGGTCCGGTTGTTCATaGAGTTGGCGGCCAGGACGA +
Preference number: 4 (lower is better)
Translates to: ETCKSWWLVPHAGKDDLYRSGCS*SWRPGR
Trigger: TCGTCCTGGCCGCCAACTCCATGAACAACCGGACCG...ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTGAGGAGAAATCAACGTaGACTGAGCGCCCACACAGG +
Preference number: 4 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPEEKST*TERPHR
Trigger: CCTGTGTGGGCGCTCAGTCCACGTTGATTTCTCCTC...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCTGGGAATTTTGCCCTTaGGGCCAGAGAAACATGGGT +
Preference number: 4 (lower is better)
Translates to: EHFPGNFALGARETWVSVWEFCP*GQRNMG
Trigger: ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCA...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp CCTATCAGAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTATCAGAGCACTTCCCTaGGAATTTTGCCCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: PIRALPWEFCPWGQRNMGIRALP*EFCPWG
Trigger: GCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGAT...ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGATCAGAGCACTTCCCTaGGAATTTTGCCCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVIRALP*EFCPWG
Trigger: GCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGAT...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCGACAGGCTGATAGGATaGGTGGAGTCCTTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLDRLIG*VESFGK
Trigger: CTTCCCAAAGGACTCCACCCATCCTATCAGCCTGTC...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp CCTATCAGAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGACAGGCTGATAGGATaGGTGGAGTCCTTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: PIRALPWEFCPWGQRNMGDRLIG*VESFGK
Trigger: CTTCCCAAAGGACTCCACCCATCCTATCAGCCTGTC...ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGGACAGGCTGATAGGATaGGTGGAGTCCTTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRDRLIG*VESFGK
Trigger: CTTCCCAAAGGACTCCACCCATCCTATCAGCCTGTC...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp CCTATCAGAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTTGGCCTGGGAGCAGGTaGAGATGCATGAGGTCATAT +
Preference number: 4 (lower is better)
Translates to: PIRALPWEFCPWGQRNMGWPGSR*RCMRSY
Trigger: ATATGACCTCATGCATCTCCACCTGCTCCCAGGCCA...ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGTGGCCTGGGAGCAGGTaGAGATGCATGAGGTCATAT +
Preference number: 4 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRWPGSR*RCMRSY
Trigger: ATATGACCTCATGCATCTCCACCTGCTCCCAGGCCA...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGTTTCCCTTACTGGCCTaGGAGCAGGTGGAGATGCAT +
Preference number: 4 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRFPLLA*EQVEMH
Trigger: ATGCATCTCCACCTGCTCCCAGGCCAGTAAGGGAAA...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTCCAAGCTACTGGAGTTaGGGTTGGAATCCATCCCTT +
Preference number: 4 (lower is better)
Translates to: ESQREGILAWLRPWFPLTPSYWS*GWNPSL
Trigger: AAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGG...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCACCTGCAAGAGTTGGTaGCTAGTTCCTCATGCTGGA +
Preference number: 4 (lower is better)
Translates to: EHFPGNFALGARETWVSVTCKSW*LVPHAG
Trigger: TCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGT...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTTTGCCACAAGGTGACTaGGAGGGGATATTCAAGGCA +
Preference number: 4 (lower is better)
Translates to: ESQREGILAWLRPWFPLTLPQGD*EGIFKA
Trigger: TGCCTTGAATATCCCCTCCCAGTCACCTTGTGGCAA...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR CAA 72 bp ATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTTaGAGGGCTCAGACACCCTTTTGCTTGTGCCACAAT +
Preference number: 4 (lower is better)
Translates to: ILAWLRPWFPLT*RAQTPFCLCHN
Trigger: ATTGTGGCACAAGCAAAAGGGTGTCTGAGCCCTCAAAGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR CAA 72 bp GAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTaGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAG +
Preference number: 4 (lower is better)
Translates to: ESWVTEGYHSVD*GVLTGCHRKNQ
Trigger: CTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp CCTATCAGAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGCTTCTTGCTGTTGGTaGGGGCAAACACTACCAACA +
Preference number: 4 (lower is better)
Translates to: PIRALPWEFCPWGQRNMGASCCW*GQTLPT
Trigger: TGTTGGTAGTGTTTGCCCTCACCAACAGCAAGAAGC...ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGGCTTCTTGCTGTTGGTaGGGGCAAACACTACCAACA +
Preference number: 4 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRASCCW*GQTLPT
Trigger: TGTTGGTAGTGTTTGCCCTCACCAACAGCAAGAAGC...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp CCTATCAGAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTCCCATGGTGGACGTATaGGAAGCCAAGCATTTGAGT +
Preference number: 4 (lower is better)
Translates to: PIRALPWEFCPWGQRNMGPMVDV*EAKHLS
Trigger: ACTCAAATGCTTGGCTTCTCATACGTCCACCATGGG...ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp ATAACAGCACCTTCCAGGGATGGGCACCTGATACAAACTTGGCCTATCAGAGCAGGGCTTGCCACAAGGTaGCTGGGAGGGGATATTCAA +
Preference number: 4 (lower is better)
Translates to: ITAPSRDGHLIQTWPIRAGLATR*LGGDIQ
Trigger: TTGAATATCCCCTCCCAGTCACCTTGTGGCAAGCCC...TGCTCTGATAGGCCAAGTTTGTATCAGGTGCCCATCCCTGGAAGGTGCTGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCAGGTTGGCAGTAGCATaGATGATGGGGTATTTTCCC +
Preference number: 4 (lower is better)
Translates to: EHFPGNFALGARETWVSVRLAVA*MMGYFP
Trigger: GGGAAAATACCCCATCATTCATGCTACTGCCAACCT...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGACTGATTCAGGGAACTaGTCCATGGTGAAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRTDSGN*SMVKAS
Trigger: AGAGGCCTTCACCATGGATCAGTTCCCTGAATCAGT...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541347.5
CDS-3UTR GCA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCCCTGAAATCCAAGTCTaGCAACTTAAACGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: EHFPGNFALGARETWVSVPEIQV*QLKRLQ
Trigger: CTGGAGGCGTTTAAGTTGGCAGACTTGGATTTCAGG...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358309.3
CDS-3UTR GCA 90 bp GAGACCTGCAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATGATCTCTATCTGATGGTGACGCCATaGTGCACGGTCCGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: ETCKSWWLVPHAGKDDLYLMVTP*CTVRLF
Trigger: GAACAACCGGACCGTGCAGCATGGCGTCACCATCAG...ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp ATAACAGCACCTTCCAGGGATGGGCACCTGATACAAACTTGGCCTATCAGAGCACATGAACTGGGGTGCTaGCACCAAAATGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ITAPSRDGHLIQTWPIRAHELGC*HQNGCC
Trigger: GCAGCAGCCATTTTGGTGGCAGCACCCCAGTTCATG...TGCTCTGATAGGCCAAGTTTGTATCAGGTGCCCATCCCTGGAAGGTGCTGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTTCAGAGAAGGAGCAATaGATCTCCATCACTCGTGTG +
Preference number: 4 (lower is better)
Translates to: ESQREGILAWLRPWFPLTSEKEQ*ISITRV
Trigger: CACACGAGTGATGGAGATGCATTGCTCCTTCTCTGA...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp CCTATCAGAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGGGAGCAGGTGGAGATaGATGAGGTCATATGGAAGA +
Preference number: 4 (lower is better)
Translates to: PIRALPWEFCPWGQRNMGGSRWR*MRSYGR
Trigger: TCTTCCATATGACCTCATGCATCTCCACCTGCTCCC...ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCTCCAGAAGGGCAAAGTaGCTACAAACAGCAGATCAG +
Preference number: 4 (lower is better)
Translates to: EHFPGNFALGARETWVSVSRRAK*LQTADQ
Trigger: CTGATCTGCTGTTTGTAGCCACTTTGCCCTTCTGGA...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTTCCAGAAGGGCAAAGTaGCTACAAACAGCAGATCAG +
Preference number: 4 (lower is better)
Translates to: ESQREGILAWLRPWFPLTSRRAK*LQTADQ
Trigger: CTGATCTGCTGTTTGTAGCCACTTTGCCCTTCTGGA...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCTGGGAATTTTGCCCTTaGGGCCAGAGAAACATGGGT +
Preference number: 4 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLWEFCP*GQRNMG
Trigger: ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCA...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCTATATCCCTTCCCCATaGATAACAGCACCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: EHFPGNFALGARETWVSVYIPSP*ITAPSR
Trigger: CCTGGAAGGTGCTGTTATCCATGGGGAAGGGATATA...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp ATAACAGCACCTTCCAGGGATGGGCACCTGATACAAACTTGGCCTATCAGAGCAGAGCCCTTGCAGGTTTaGGGACATGATGGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: ITAPSRDGHLIQTWPIRAEPLQV*GHDGRG
Trigger: CCCTCTTCCATCATGTCCCCAAACCTGCAAGGGCTC...TGCTCTGATAGGCCAAGTTTGTATCAGGTGCCCATCCCTGGAAGGTGCTGTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp CCTATCAGAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTATTGGTAGGACCCCATaGTGGACGTATGAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: PIRALPWEFCPWGQRNMGIGRTP*WTYEKP
Trigger: TGGCTTCTCATACGTCCACCATGGGGTCCTACCAAT...ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGATTGGTAGGACCCCATaGTGGACGTATGAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRIGRTP*WTYEKP
Trigger: TGGCTTCTCATACGTCCACCATGGGGTCCTACCAAT...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTTGGCCTGGGAGCAGGTaGAGATGCATGAGGTCATAT +
Preference number: 4 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPWPGSR*RCMRSY
Trigger: ATATGACCTCATGCATCTCCACCTGCTCCCAGGCCA...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGTTCTATTTCCCTTACTaGCCTGGGAGCAGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVFYFPY*PGSRWR
Trigger: TCTCCACCTGCTCCCAGGCCAGTAAGGGAAATAGAA...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp CCTATCAGAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTTTCTATTTCCCTTACTaGCCTGGGAGCAGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: PIRALPWEFCPWGQRNMGFYFPY*PGSRWR
Trigger: TCTCCACCTGCTCCCAGGCCAGTAAGGGAAATAGAA...ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp CCTATCAGAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTCCAAGCTACTGGAGTTaGGGTTGGAATCCATCCCTT +
Preference number: 4 (lower is better)
Translates to: PIRALPWEFCPWGQRNMGPSYWS*GWNPSL
Trigger: AAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGG...ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCCAAGCTACTGGAGTTaGGGTTGGAATCCATCCCTT +
Preference number: 4 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVPSYWS*GWNPSL
Trigger: AAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGG...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGACCTGCAAGAGTTGGTaGCTAGTTCCTCATGCTGGA +
Preference number: 4 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVTCKSW*LVPHAG
Trigger: TCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGT...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGGAGACCTGCAAGAGTTaGTGGCTAGTTCCTCATGCT +
Preference number: 4 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRETCKS*WLVPHA
Trigger: AGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCGAGACCTGCAAGAGTTaGTGGCTAGTTCCTCATGCT +
Preference number: 4 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLETCKS*WLVPHA
Trigger: AGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GAGACCTGCAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATGATCTCTATAGCCTCTTCTGTGTCTaGGCTATGCCACGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ETCKSWWLVPHAGKDDLYSLFCV*AMPRSS
Trigger: GCTGCTGCGTGGCATAGCCCAGACACAGAAGAGGCT...ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp CCTATCAGAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTTTGCCACAAGGTGACTaGGAGGGGATATTCAAGGCA +
Preference number: 4 (lower is better)
Translates to: PIRALPWEFCPWGQRNMGLPQGD*EGIFKA
Trigger: TGCCTTGAATATCCCCTCCCAGTCACCTTGTGGCAA...ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp ATAACAGCACCTTCCAGGGATGGGCACCTGATACAAACTTGGCCTATCAGAGCAACCTTTCCCTGCCTTTaGCCAGAAGGCCACAGGACA +
Preference number: 4 (lower is better)
Translates to: ITAPSRDGHLIQTWPIRATFPCL*PEGHRT
Trigger: TGTCCTGTGGCCTTCTGGCCAAAGGCAGGGAAAGGT...TGCTCTGATAGGCCAAGTTTGTATCAGGTGCCCATCCCTGGAAGGTGCTGTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541347.5
CDS-3UTR CCA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGGCAGTGCTGCGGGCTTaGTGGCCTGCTCATGGTGGA +
Preference number: 4 (lower is better)
Translates to: QHSRVVLCALGPSFCACKAVLRA*WPAHGG
Trigger: TCCACCATGAGCAGGCCACCAAGCCCGCAGCACTGC...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541347.5
CDS-3UTR TCA 90 bp CCTATCAGAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGGCCAATGGCAAAGATaGCGGAGTAGAATATGGACA +
Preference number: 4 (lower is better)
Translates to: PIRALPWEFCPWGQRNMGGQWQR*RSRIWT
Trigger: TGTCCATATTCTACTCCGTCATCTTTGCCATTGGCC...ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCGGCCAATGGCAAAGATaGCGGAGTAGAATATGGACA +
Preference number: 4 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLGQWQR*RSRIWT
Trigger: TGTCCATATTCTACTCCGTCATCTTTGCCATTGGCC...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCAGAGGAAAAACACGATaGCCACCAGAAGGATCAGTT +
Preference number: 4 (lower is better)
Translates to: EHFPGNFALGARETWVSVRGKTR*PPEGSV
Trigger: AACTGATCCTTCTGGTGGTCATCGTGTTTTTCCTCT...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGCCGTCTCAGTCACACTaGGGGCCAGCCTCAGATCCT +
Preference number: 4 (lower is better)
Translates to: QHSRVVLCALGPSFCACKPSQSH*GPASDP
Trigger: AGGATCTGAGGCTGGCCCTCAGTGTGACTGAGACGG...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTGGTAAAGGTATCTTCTaGACTTCTCCCCAGCAAATG +
Preference number: 4 (lower is better)
Translates to: ESQREGILAWLRPWFPLTGKGIF*TSPQQM
Trigger: CATTTGCTGGGGAGAAGTTCAGAAGATACCTTTACC...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTATTTCTGCTTCTCCATaGGATTGGACTGGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: ESQREGILAWLRPWFPLTISASP*DWTGSF
Trigger: GAAGCTTCCAGTCCAATCTCATGGAGAAGCAGAAAT...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTGAGAAGCCAAGCATTTaGGTTTTGACTCGATGCAGT +
Preference number: 4 (lower is better)
Translates to: ESQREGILAWLRPWFPLTEKPSI*VLTRCS
Trigger: ACTGCATCGAGTCAAAACTCAAATGCTTGGCTTCTC...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCGAGAAGCCAAGCATTTaGGTTTTGACTCGATGCAGT +
Preference number: 4 (lower is better)
Translates to: EHFPGNFALGARETWVSVEKPSI*VLTRCS
Trigger: ACTGCATCGAGTCAAAACTCAAATGCTTGGCTTCTC...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCCAGGAAACTGAAGCTTaGTTTGTCCCAAGCTACTGG +
Preference number: 4 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLQETEA*FVPSYW
Trigger: CCAGTAGCTTGGGACAAATCAAGCTTCAGTTTCCTG...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTTACAGACCAGGAAACTaGAGCTTGATTTGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: ESQREGILAWLRPWFPLTYRPGN*SLICPK
Trigger: CTTGGGACAAATCAAGCTTCAGTTTCCTGGTCTGTA...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCTACAGACCAGGAAACTaGAGCTTGATTTGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: EHFPGNFALGARETWVSVYRPGN*SLICPK
Trigger: CTTGGGACAAATCAAGCTTCAGTTTCCTGGTCTGTA...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp GAGACCTGCAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATGATCTCTATGGGCTTGCCACAAGGTaGCTGGGAGGGGATATTCAA +
Preference number: 4 (lower is better)
Translates to: ETCKSWWLVPHAGKDDLYGLATR*LGGDIQ
Trigger: TTGAATATCCCCTCCCAGTCACCTTGTGGCAAGCCC...ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGAGGTTGGCAGTAGCATaGATGATGGGGTATTTTCCC +
Preference number: 4 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVRLAVA*MMGYFP
Trigger: GGGAAAATACCCCATCATTCATGCTACTGCCAACCT...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCAGGTTGGCAGTAGCATaGATGATGGGGTATTTTCCC +
Preference number: 4 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLRLAVA*MMGYFP
Trigger: GGGAAAATACCCCATCATTCATGCTACTGCCAACCT...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGTCAGAGAAGGAGCAATaGATCTCCATCACTCGTGTG +
Preference number: 4 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVSEKEQ*ISITRV
Trigger: CACACGAGTGATGGAGATGCATTGCTCCTTCTCTGA...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTGCTCAGACACCCTTTTaGTTGTGCCACAATATGAAC +
Preference number: 4 (lower is better)
Translates to: ESQREGILAWLRPWFPLTAQTPF*LCHNMN
Trigger: GTTCATATTGTGGCACAAGCAAAAGGGTGTCTGAGC...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp GAGACCTGCAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATGATCTCTATGGAGTGCTCACTGGGTaGCATCGTAAGAACCAGCCT +
Preference number: 4 (lower is better)
Translates to: ETCKSWWLVPHAGKDDLYGVLTG*HRKNQP
Trigger: AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCC...ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGAGATGGGCAGGGGCTTaGCACAAGGTGACTGGGAGG +
Preference number: 4 (lower is better)
Translates to: QHSRVVLCALGPSFCACKRWAGA*HKVTGR
Trigger: CCTCCCAGTCACCTTGTGGCAAGCCCCTGCCCATCT...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp CCTATCAGAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTTCCAGAAGGGCAAAGTaGCTACAAACAGCAGATCAG +
Preference number: 4 (lower is better)
Translates to: PIRALPWEFCPWGQRNMGSRRAK*LQTADQ
Trigger: CTGATCTGCTGTTTGTAGCCACTTTGCCCTTCTGGA...ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGTCCAGAAGGGCAAAGTaGCTACAAACAGCAGATCAG +
Preference number: 4 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRSRRAK*LQTADQ
Trigger: CTGATCTGCTGTTTGTAGCCACTTTGCCCTTCTGGA...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGCGGTCCGGTTGTTCATaGAGTTGGCGGCCAGGACGA +
Preference number: 4 (lower is better)
Translates to: QHSRVVLCALGPSFCACKRSGCS*SWRPGR
Trigger: TCGTCCTGGCCGCCAACTCCATGAACAACCGGACCG...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTGCTTTGGCTTTCTTGTaGTTCTTGCAGGAAAACAGC +
Preference number: 4 (lower is better)
Translates to: ESQREGILAWLRPWFPLTALAFL*FLQENS
Trigger: GCTGTTTTCCTGCAAGAACCACAAGAAAGCCAAAGC...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCGGATTCAGGCAACAATaGCTAAATGCAACCGTCTCA +
Preference number: 4 (lower is better)
Translates to: EHFPGNFALGARETWVSVGFRQQ*LNATVS
Trigger: TGAGACGGTTGCATTTAGCCATTGTTGCCTGAATCC...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GAGACCTGCAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATGATCTCTATGAGGAGAAATCAACGTaGACTGAGCGCCCACACAGG +
Preference number: 4 (lower is better)
Translates to: ETCKSWWLVPHAGKDDLYEEKST*TERPHR
Trigger: CCTGTGTGGGCGCTCAGTCCACGTTGATTTCTCCTC...ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGGTAGACACAAGGCTTTaGGATTCCCTTCAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRVDTRL*DSLQRR
Trigger: CCTTCTCTGAAGGGAATCCCAAAGCCTTGTGTCTAC...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp ATAACAGCACCTTCCAGGGATGGGCACCTGATACAAACTTGGCCTATCAGAGCAAATCAGGGGAGAGGCTaGATCAGGCACATGGTAAGG +
Preference number: 4 (lower is better)
Translates to: ITAPSRDGHLIQTWPIRANQGRG*IRHMVR
Trigger: CCTTACCATGTGCCTGATCCAGCCTCTCCCCTGATT...TGCTCTGATAGGCCAAGTTTGTATCAGGTGCCCATCCCTGGAAGGTGCTGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp ATAACAGCACCTTCCAGGGATGGGCACCTGATACAAACTTGGCCTATCAGAGCAGACAGGCTGATAGGATaGGTGGAGTCCTTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: ITAPSRDGHLIQTWPIRADRLIG*VESFGK
Trigger: CTTCCCAAAGGACTCCACCCATCCTATCAGCCTGTC...TGCTCTGATAGGCCAAGTTTGTATCAGGTGCCCATCCCTGGAAGGTGCTGTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTATGCATGAGGTCATATaGAAGAGACAGGCTGATAGG +
Preference number: 4 (lower is better)
Translates to: ESQREGILAWLRPWFPLTMHEVI*KRQADR
Trigger: CCTATCAGCCTGTCTCTTCCATATGACCTCATGCAT...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp ATAACAGCACCTTCCAGGGATGGGCACCTGATACAAACTTGGCCTATCAGAGCATGGCCTGGGAGCAGGTaGAGATGCATGAGGTCATAT +
Preference number: 4 (lower is better)
Translates to: ITAPSRDGHLIQTWPIRAWPGSR*RCMRSY
Trigger: ATATGACCTCATGCATCTCCACCTGCTCCCAGGCCA...TGCTCTGATAGGCCAAGTTTGTATCAGGTGCCCATCCCTGGAAGGTGCTGTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGTTTGTCCCAAGCTACTaGAGTTGGGGTTGGAATCCA +
Preference number: 4 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRFVPSY*SWGWNP
Trigger: TGGATTCCAACCCCAACTCCAGTAGCTTGGGACAAA...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCTTTGTCCCAAGCTACTaGAGTTGGGGTTGGAATCCA +
Preference number: 4 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLFVPSY*SWGWNP
Trigger: TGGATTCCAACCCCAACTCCAGTAGCTTGGGACAAA...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGTTTGTCCCAAGCTACTaGAGTTGGGGTTGGAATCCA +
Preference number: 4 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVFVPSY*SWGWNP
Trigger: TGGATTCCAACCCCAACTCCAGTAGCTTGGGACAAA...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp ATAACAGCACCTTCCAGGGATGGGCACCTGATACAAACTTGGCCTATCAGAGCAGCAGTCCAGGAGAGTTaGGTTACGGAAGGCTATCAC +
Preference number: 4 (lower is better)
Translates to: ITAPSRDGHLIQTWPIRAAVQES*VTEGYH
Trigger: GTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC...TGCTCTGATAGGCCAAGTTTGTATCAGGTGCCCATCCCTGGAAGGTGCTGTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp GAGACCTGCAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATGATCTCTATACTGATTCAGGGAACTaGTCCATGGTGAAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: ETCKSWWLVPHAGKDDLYTDSGN*SMVKAP
Trigger: TGGGGCCTTCACCATGGATCAGTTCCCTGAATCAGT...ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358309.3
ENST00000542107.5
CDS-3UTR TCA 90 bp CCTATCAGAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTAGAGGAAAAACACGATaGCCACCAGAAGGATCAGTT +
Preference number: 4 (lower is better)
Translates to: PIRALPWEFCPWGQRNMGRGKTR*PPEGSV
Trigger: AACTGATCCTTCTGGTGGTCATCGTGTTTTTCCTCT...ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTCAGCAAATGCATAGATaGGAGGATTCAGGCAACAAT +
Preference number: 4 (lower is better)
Translates to: ESQREGILAWLRPWFPLTQQMHR*EDSGNN
Trigger: ATTGTTGCCTGAATCCTCTCATCTATGCATTTGCTG...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGGCTTGTGCCACAATATaGACAATATTCACCACCCTC +
Preference number: 4 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVACATI*TIFTTL
Trigger: GAGGGTGGTGAATATTGTTCATATTGTGGCACAAGC...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGATTTCTGCTTCTCCATaGGATTGGACTGGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVISASP*DWTGSF
Trigger: GAAGCTTCCAGTCCAATCTCATGGAGAAGCAGAAAT...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp CCTATCAGAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTCAAGCATTTGAGTTTTaGCTCGATGCAGTAGGCAGT +
Preference number: 4 (lower is better)
Translates to: PIRALPWEFCPWGQRNMGQAFEF*LDAVGS
Trigger: ACTGCCTACTGCATCGAGTCAAAACTCAAATGCTTG...ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCCAAGCATTTGAGTTTTaGCTCGATGCAGTAGGCAGT +
Preference number: 4 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLQAFEF*LDAVGS
Trigger: ACTGCCTACTGCATCGAGTCAAAACTCAAATGCTTG...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCAAGCATTTGAGTTTTaGCTCGATGCAGTAGGCAGT +
Preference number: 4 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVQAFEF*LDAVGS
Trigger: ACTGCCTACTGCATCGAGTCAAAACTCAAATGCTTG...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCGAGAAGCCAAGCATTTaGGTTTTGACTCGATGCAGT +
Preference number: 4 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLEKPSI*VLTRCS
Trigger: ACTGCATCGAGTCAAAACTCAAATGCTTGGCTTCTC...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTCAGGAAACTGAAGCTTaGTTTGTCCCAAGCTACTGG +
Preference number: 4 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPQETEA*FVPSYW
Trigger: CCAGTAGCTTGGGACAAATCAAGCTTCAGTTTCCTG...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTAGGATGATCTCTATGTaGAAGGTACCTTATCCCTCT +
Preference number: 4 (lower is better)
Translates to: ESQREGILAWLRPWFPLTRMISM*KVPYPS
Trigger: AGAGGGATAAGGTACCTTTCACATAGAGATCATCCT...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCAGGATGATCTCTATGTaGAAGGTACCTTATCCCTCT +
Preference number: 4 (lower is better)
Translates to: EHFPGNFALGARETWVSVRMISM*KVPYPS
Trigger: AGAGGGATAAGGTACCTTTCACATAGAGATCATCCT...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCTCATGCTGGAAAGGATaGTCTCTATGTGAAAGGTAC +
Preference number: 4 (lower is better)
Translates to: EHFPGNFALGARETWVSVSCWKG*SLCERY
Trigger: GTACCTTTCACATAGAGATCATCCTTTCCAGCATGA...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGAATTTGTTTCCACATTaGGGAGCACGGGCCAGATTT +
Preference number: 4 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRNLFPH*GARARF
Trigger: AAATCTGGCCCGTGCTCCGCAATGTGGAAACAAATT...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCCTTTCTTGTGGTTCTTaGAGGAAAACAGCGTCTGGA +
Preference number: 4 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLLSCGS*RKTASG
Trigger: TCCAGACGCTGTTTTCCTGCAAGAACCACAAGAAAG...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGCTTTCTTGTGGTTCTTaGAGGAAAACAGCGTCTGGA +
Preference number: 4 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRLSCGS*RKTASG
Trigger: TCCAGACGCTGTTTTCCTGCAAGAACCACAAGAAAG...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp CCTATCAGAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGCAACAATGGCTAAATaGAACCGTCTCAGTCACACT +
Preference number: 4 (lower is better)
Translates to: PIRALPWEFCPWGQRNMGATMAK*NRLSHT
Trigger: AGTGTGACTGAGACGGTTGCATTTAGCCATTGTTGC...ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGGCAACAATGGCTAAATaGAACCGTCTCAGTCACACT +
Preference number: 4 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVATMAK*NRLSHT
Trigger: AGTGTGACTGAGACGGTTGCATTTAGCCATTGTTGC...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCGAACACTTCCATGCCTaGTCCTTTGTGATTCAGATG +
Preference number: 4 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLEHFHA*SFVIQM
Trigger: CATCTGAATCACAAAGGAGCAGGCATGGAAGTGTTC...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCAGAACACTTCCATaGCTGCTCCTTTGTGATTCA +
Preference number: 4 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVLRTLP*LLLCDS
Trigger: TGAATCACAAAGGAGCAGGCATGGAAGTGTTCTGAG...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGGCTCAGACACCCTTTTaGTTGTGCCACAATATGAAC +
Preference number: 4 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVAQTPF*LCHNMN
Trigger: GTTCATATTGTGGCACAAGCAAAAGGGTGTCTGAGC...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp CCTATCAGAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTAAAAGGGTTGAGACCTaGAAGAGTTGGTGGCTAGTT +
Preference number: 4 (lower is better)
Translates to: PIRALPWEFCPWGQRNMGKRVET*KSWWLV
Trigger: AACTAGCCACCAACTCTTGCAGGTCTCAACCCTTTT...ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTTTGCACATGGCATTGTaGAGGCCCTTTTCATTTATC +
Preference number: 4 (lower is better)
Translates to: ESQREGILAWLRPWFPLTLHMAL*RPFSFI
Trigger: GATAAATGAAAAGGGCCTCCACAATGCCATGTGCAA...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCTTGCACATGGCATTGTaGAGGCCCTTTTCATTTATC +
Preference number: 4 (lower is better)
Translates to: EHFPGNFALGARETWVSVLHMAL*RPFSFI
Trigger: GATAAATGAAAAGGGCCTCCACAATGCCATGTGCAA...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGGGTTGTTCATGGAGTTaGCGGCCAGGACGATGGCCA +
Preference number: 4 (lower is better)
Translates to: QHSRVVLCALGPSFCACKGCSWS*RPGRWP
Trigger: TGGCCATCGTCCTGGCCGCCAACTCCATGAACAACC...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGTTTGTGAACATGAACTaGGGTGCTGCCACCAAAATG +
Preference number: 4 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRFVNMN*GAATKM
Trigger: CATTTTGGTGGCAGCACCCCAGTTCATGTTCACAAA...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCTCCTCATGTCACAACTaGGAAAGAAGTCATAGAGCT +
Preference number: 4 (lower is better)
Translates to: EHFPGNFALGARETWVSVSSCHN*ERSHRA
Trigger: AGCTCTATGACTTCTTTCCCAGTTGTGACATGAGGA...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTTCCTCATGTCACAACTaGGAAAGAAGTCATAGAGCT +
Preference number: 4 (lower is better)
Translates to: ESQREGILAWLRPWFPLTSSCHN*ERSHRA
Trigger: AGCTCTATGACTTCTTTCCCAGTTGTGACATGAGGA...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGGGATTCAGGCAACAATaGCTAAATGCAACCGTCTCA +
Preference number: 4 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRGFRQQ*LNATVS
Trigger: TGAGACGGTTGCATTTAGCCATTGTTGCCTGAATCC...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCGGATTCAGGCAACAATaGCTAAATGCAACCGTCTCA +
Preference number: 4 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLGFRQQ*LNATVS
Trigger: TGAGACGGTTGCATTTAGCCATTGTTGCCTGAATCC...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTGTAGACACAAGGCTTTaGGATTCCCTTCAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPVDTRL*DSLQRR
Trigger: CCTTCTCTGAAGGGAATCCCAAAGCCTTGTGTCTAC...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTTATATCCCTTCCCCATaGATAACAGCACCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPYIPSP*ITAPSR
Trigger: CCTGGAAGGTGCTGTTATCCATGGGGAAGGGATATA...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp CCTATCAGAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTATGCATGAGGTCATATaGAAGAGACAGGCTGATAGG +
Preference number: 4 (lower is better)
Translates to: PIRALPWEFCPWGQRNMGMHEVI*KRQADR
Trigger: CCTATCAGCCTGTCTCTTCCATATGACCTCATGCAT...ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGATGCATGAGGTCATATaGAAGAGACAGGCTGATAGG +
Preference number: 4 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRMHEVI*KRQADR
Trigger: CCTATCAGCCTGTCTCTTCCATATGACCTCATGCAT...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCATGCATGAGGTCATATaGAAGAGACAGGCTGATAGG +
Preference number: 4 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLMHEVI*KRQADR
Trigger: CCTATCAGCCTGTCTCTTCCATATGACCTCATGCAT...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp ATAACAGCACCTTCCAGGGATGGGCACCTGATACAAACTTGGCCTATCAGAGCATTCTATTTCCCTTACTaGCCTGGGAGCAGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: ITAPSRDGHLIQTWPIRAFYFPY*PGSRWR
Trigger: TCTCCACCTGCTCCCAGGCCAGTAAGGGAAATAGAA...TGCTCTGATAGGCCAAGTTTGTATCAGGTGCCCATCCCTGGAAGGTGCTGTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCCCATCCCTTCTTATTTaGGGGCAGGGTTTTTCTATT +
Preference number: 4 (lower is better)
Translates to: EHFPGNFALGARETWVSVPSLLI*GQGFSI
Trigger: AATAGAAAAACCCTGCCCCCAAATAAGAAGGGATGG...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTTACTGGAGTTGGGGTTaGAATCCATCCCTTCTTATT +
Preference number: 4 (lower is better)
Translates to: ESQREGILAWLRPWFPLTYWSWG*NPSLLI
Trigger: AATAAGAAGGGATGGATTCCAACCCCAACTCCAGTA...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCTACTGGAGTTGGGGTTaGAATCCATCCCTTCTTATT +
Preference number: 4 (lower is better)
Translates to: EHFPGNFALGARETWVSVYWSWG*NPSLLI
Trigger: AATAAGAAGGGATGGATTCCAACCCCAACTCCAGTA...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp ATAACAGCACCTTCCAGGGATGGGCACCTGATACAAACTTGGCCTATCAGAGCAACCTGCAAGAGTTGGTaGCTAGTTCCTCATGCTGGA +
Preference number: 4 (lower is better)
Translates to: ITAPSRDGHLIQTWPIRATCKSW*LVPHAG
Trigger: TCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGT...TGCTCTGATAGGCCAAGTTTGTATCAGGTGCCCATCCCTGGAAGGTGCTGTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGAGCCTCTTCTGTGTCTaGGCTATGCCACGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QHSRVVLCALGPSFCACKSLFCV*AMPRSS
Trigger: GCTGCTGCGTGGCATAGCCCAGACACAGAAGAGGCT...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCAAAGTTTTCTGTCACTaGTTCAGGGAACTGATCCAT +
Preference number: 4 (lower is better)
Translates to: EHFPGNFALGARETWVSVKVFCH*FRELIH
Trigger: ATGGATCAGTTCCCTGAATCAGTGACAGAAAACTTT...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp ATAACAGCACCTTCCAGGGATGGGCACCTGATACAAACTTGGCCTATCAGAGCAGGCCAATGGCAAAGATaGCGGAGTAGAATATGGACA +
Preference number: 4 (lower is better)
Translates to: ITAPSRDGHLIQTWPIRAGQWQR*RSRIWT
Trigger: TGTCCATATTCTACTCCGTCATCTTTGCCATTGGCC...TGCTCTGATAGGCCAAGTTTGTATCAGGTGCCCATCCCTGGAAGGTGCTGTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTAGAGGAAAAACACGATaGCCACCAGAAGGATCAGTT +
Preference number: 4 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPRGKTR*PPEGSV
Trigger: AACTGATCCTTCTGGTGGTCATCGTGTTTTTCCTCT...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGCAGCAAATGCATAGATaGGAGGATTCAGGCAACAAT +
Preference number: 4 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRQQMHR*EDSGNN
Trigger: ATTGTTGCCTGAATCCTCTCATCTATGCATTTGCTG...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTATTTCTGCTTCTCCATaGGATTGGACTGGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPISASP*DWTGSF
Trigger: GAAGCTTCCAGTCCAATCTCATGGAGAAGCAGAAAT...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp ATAACAGCACCTTCCAGGGATGGGCACCTGATACAAACTTGGCCTATCAGAGCACAGGAAACTGAAGCTTaGTTTGTCCCAAGCTACTGG +
Preference number: 4 (lower is better)
Translates to: ITAPSRDGHLIQTWPIRAQETEA*FVPSYW
Trigger: CCAGTAGCTTGGGACAAATCAAGCTTCAGTTTCCTG...TGCTCTGATAGGCCAAGTTTGTATCAGGTGCCCATCCCTGGAAGGTGCTGTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGTCATGCTGGAAAGGATaGTCTCTATGTGAAAGGTAC +
Preference number: 4 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVSCWKG*SLCERY
Trigger: GTACCTTTCACATAGAGATCATCCTTTCCAGCATGA...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGTCATGCTGGAAAGGATaGTCTCTATGTGAAAGGTAC +
Preference number: 4 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRSCWKG*SLCERY
Trigger: GTACCTTTCACATAGAGATCATCCTTTCCAGCATGA...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGCATGAACTGGGGTGCTaGCACCAAAATGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QHSRVVLCALGPSFCACKHELGC*HQNGCC
Trigger: GCAGCAGCCATTTTGGTGGCAGCACCCCAGTTCATG...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTAATTTGTTTCCACATTaGGGAGCACGGGCCAGATTT +
Preference number: 4 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPNLFPH*GARARF
Trigger: AAATCTGGCCCGTGCTCCGCAATGTGGAAACAAATT...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTGCAACAATGGCTAAATaGAACCGTCTCAGTCACACT +
Preference number: 4 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPATMAK*NRLSHT
Trigger: AGTGTGACTGAGACGGTTGCATTTAGCCATTGTTGC...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTCTCAGAACACTTCCATaGCTGCTCCTTTGTGATTCA +
Preference number: 4 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPLRTLP*LLLCDS
Trigger: TGAATCACAAAGGAGCAGGCATGGAAGTGTTCTGAG...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp ATAACAGCACCTTCCAGGGATGGGCACCTGATACAAACTTGGCCTATCAGAGCATCAGAGAAGGAGCAATaGATCTCCATCACTCGTGTG +
Preference number: 4 (lower is better)
Translates to: ITAPSRDGHLIQTWPIRASEKEQ*ISITRV
Trigger: CACACGAGTGATGGAGATGCATTGCTCCTTCTCTGA...TGCTCTGATAGGCCAAGTTTGTATCAGGTGCCCATCCCTGGAAGGTGCTGTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGGGCACAGCACAGCAGTaGCAGGTGTGGAAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: QHSRVVLCALGPSFCACKGTAQQ*QVWKAE
Trigger: TTCTGCTTTCCACACCTGGCACTGCTGTGCTGTGCC...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGGGAGTGCTCACTGGGTaGCATCGTAAGAACCAGCCT +
Preference number: 4 (lower is better)
Translates to: QHSRVVLCALGPSFCACKGVLTG*HRKNQP
Trigger: AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCC...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGTTGCACATGGCATTGTaGAGGCCCTTTTCATTTATC +
Preference number: 4 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRLHMAL*RPFSFI
Trigger: GATAAATGAAAAGGGCCTCCACAATGCCATGTGCAA...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTGCTTTGGCTTTCTTGTaGTTCTTGCAGGAAAACAGC +
Preference number: 4 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPALAFL*FLQENS
Trigger: GCTGTTTTCCTGCAAGAACCACAAGAAAGCCAAAGC...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGTCCTCATGTCACAACTaGGAAAGAAGTCATAGAGCT +
Preference number: 4 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVSSCHN*ERSHRA
Trigger: AGCTCTATGACTTCTTTCCCAGTTGTGACATGAGGA...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGGAGCCCTTGCAGGTTTaGGGACATGATGGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: QHSRVVLCALGPSFCACKEPLQV*GHDGRG
Trigger: CCCTCTTCCATCATGTCCCCAAACCTGCAAGGGCTC...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGGGTAGGACCCCATGGTaGACGTATGAGAAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: QHSRVVLCALGPSFCACKGRTPW*TYEKPS
Trigger: GCTTGGCTTCTCATACGTCCACCATGGGGTCCTACC...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCCATCCCTTCTTATTTaGGGGCAGGGTTTTTCTATT +
Preference number: 4 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVPSLLI*GQGFSI
Trigger: AATAGAAAAACCCTGCCCCCAAATAAGAAGGGATGG...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGTACTGGAGTTGGGGTTaGAATCCATCCCTTCTTATT +
Preference number: 4 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVYWSWG*NPSLLI
Trigger: AATAAGAAGGGATGGATTCCAACCCCAACTCCAGTA...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GAGACCTGCAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATGATCTCTATTTGCCACAAGGTGACTaGGAGGGGATATTCAAGGCA +
Preference number: 4 (lower is better)
Translates to: ETCKSWWLVPHAGKDDLYLPQGD*EGIFKA
Trigger: TGCCTTGAATATCCCCTCCCAGTCACCTTGTGGCAA...ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp GAGACCTGCAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATGATCTCTATGGCCAATGGCAAAGATaGCGGAGTAGAATATGGACA +
Preference number: 4 (lower is better)
Translates to: ETCKSWWLVPHAGKDDLYGQWQR*RSRIWT
Trigger: TGTCCATATTCTACTCCGTCATCTTTGCCATTGGCC...ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGGGAGGTAAATGTCGGTaGCACTCTTGGGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: QHSRVVLCALGPSFCACKGGKCR*HSWASC
Trigger: GCAAGAAGCCCAAGAGTGTCACCGACATTTACCTCC...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp ATAACAGCACCTTCCAGGGATGGGCACCTGATACAAACTTGGCCTATCAGAGCAGGTAAAGGTATCTTCTaGACTTCTCCCCAGCAAATG +
Preference number: 4 (lower is better)
Translates to: ITAPSRDGHLIQTWPIRAGKGIF*TSPQQM
Trigger: CATTTGCTGGGGAGAAGTTCAGAAGATACCTTTACC...TGCTCTGATAGGCCAAGTTTGTATCAGGTGCCCATCCCTGGAAGGTGCTGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp ATAACAGCACCTTCCAGGGATGGGCACCTGATACAAACTTGGCCTATCAGAGCAATTTCTGCTTCTCCATaGGATTGGACTGGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: ITAPSRDGHLIQTWPIRAISASP*DWTGSF
Trigger: GAAGCTTCCAGTCCAATCTCATGGAGAAGCAGAAAT...TGCTCTGATAGGCCAAGTTTGTATCAGGTGCCCATCCCTGGAAGGTGCTGTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp ATAACAGCACCTTCCAGGGATGGGCACCTGATACAAACTTGGCCTATCAGAGCACAAGCATTTGAGTTTTaGCTCGATGCAGTAGGCAGT +
Preference number: 4 (lower is better)
Translates to: ITAPSRDGHLIQTWPIRAQAFEF*LDAVGS
Trigger: ACTGCCTACTGCATCGAGTCAAAACTCAAATGCTTG...TGCTCTGATAGGCCAAGTTTGTATCAGGTGCCCATCCCTGGAAGGTGCTGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp GAGACCTGCAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATGATCTCTATCAGGAAACTGAAGCTTaGTTTGTCCCAAGCTACTGG +
Preference number: 4 (lower is better)
Translates to: ETCKSWWLVPHAGKDDLYQETEA*FVPSYW
Trigger: CCAGTAGCTTGGGACAAATCAAGCTTCAGTTTCCTG...ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGGAACATGAACTGGGGTaGTGCCACCAAAATGGCTGC +
Preference number: 4 (lower is better)
Translates to: QHSRVVLCALGPSFCACKEHELG*CHQNGC
Trigger: GCAGCCATTTTGGTGGCAGCACCCCAGTTCATGTTC...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTGGAAATATGTATTTCTaGTTCTCCATGAGATTGGAC +
Preference number: 4 (lower is better)
Translates to: ESQREGILAWLRPWFPLTGNMYF*FSMRLD
Trigger: GTCCAATCTCATGGAGAAGCAGAAATACATATTTCC...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp ATAACAGCACCTTCCAGGGATGGGCACCTGATACAAACTTGGCCTATCAGAGCAAAAAGGGTTGAGACCTaGAAGAGTTGGTGGCTAGTT +
Preference number: 4 (lower is better)
Translates to: ITAPSRDGHLIQTWPIRAKRVET*KSWWLV
Trigger: AACTAGCCACCAACTCTTGCAGGTCTCAACCCTTTT...TGCTCTGATAGGCCAAGTTTGTATCAGGTGCCCATCCCTGGAAGGTGCTGTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTTTGCACATGGCATTGTaGAGGCCCTTTTCATTTATC +
Preference number: 4 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPLHMAL*RPFSFI
Trigger: GATAAATGAAAAGGGCCTCCACAATGCCATGTGCAA...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp ATAACAGCACCTTCCAGGGATGGGCACCTGATACAAACTTGGCCTATCAGAGCAGCTTTGGCTTTCTTGTaGTTCTTGCAGGAAAACAGC +
Preference number: 4 (lower is better)
Translates to: ITAPSRDGHLIQTWPIRAALAFL*FLQENS
Trigger: GCTGTTTTCCTGCAAGAACCACAAGAAAGCCAAAGC...TGCTCTGATAGGCCAAGTTTGTATCAGGTGCCCATCCCTGGAAGGTGCTGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGTTGTTTTGTGTGCATTaGGTCCATCATTTTGTGCCT +
Preference number: 4 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVLFCVH*VHHFVP
Trigger: AGGCACAAAATGATGGACCCAATGCACACAAAACAA...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGTTGTTTTGTGTGCATTaGGTCCATCATTTTGTGCCT +
Preference number: 4 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRLFCVH*VHHFVP
Trigger: AGGCACAAAATGATGGACCCAATGCACACAAAACAA...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GAGACCTGCAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATGATCTCTATTATATCCCTTCCCCATaGATAACAGCACCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: ETCKSWWLVPHAGKDDLYYIPSP*ITAPSR
Trigger: CCTGGAAGGTGCTGTTATCCATGGGGAAGGGATATA...ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCTCCATGAGATTGGACTaGAAGCTTCCATCTTATATA +
Preference number: 4 (lower is better)
Translates to: EHFPGNFALGARETWVSVSMRLD*KLPSYI
Trigger: TATATAAGATGGAAGCTTCCAGTCCAATCTCATGGA...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCGGTAAGGGTGATGTGTaGCATTTGTTTTGTGTAATC +
Preference number: 4 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLGKGDV*HLFCVI
Trigger: GATTACACAAAACAAATGCCACACATCACCCTTACC...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGTTTCCCTTACTGGCCTaGGAGCAGGTGGAGATGCAT +
Preference number: 4 (lower is better)
Translates to: QHSRVVLCALGPSFCACKFPLLA*EQVEMH
Trigger: ATGCATCTCCACCTGCTCCCAGGCCAGTAAGGGAAA...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTCCATCCCTTCTTATTTaGGGGCAGGGTTTTTCTATT +
Preference number: 4 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPPSLLI*GQGFSI
Trigger: AATAGAAAAACCCTGCCCCCAAATAAGAAGGGATGG...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp GAGACCTGCAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATGATCTCTATGGTAAAGGTATCTTCTaGACTTCTCCCCAGCAAATG +
Preference number: 4 (lower is better)
Translates to: ETCKSWWLVPHAGKDDLYGKGIF*TSPQQM
Trigger: CATTTGCTGGGGAGAAGTTCAGAAGATACCTTTACC...ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGCCCATGGTGGACGTATaGGAAGCCAAGCATTTGAGT +
Preference number: 4 (lower is better)
Translates to: QHSRVVLCALGPSFCACKPMVDV*EAKHLS
Trigger: ACTCAAATGCTTGGCTTCTCATACGTCCACCATGGG...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp GAGACCTGCAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATGATCTCTATGAACACTTCCATGCCTaGTCCTTTGTGATTCAGATG +
Preference number: 4 (lower is better)
Translates to: ETCKSWWLVPHAGKDDLYEHFHA*SFVIQM
Trigger: CATCTGAATCACAAAGGAGCAGGCATGGAAGTGTTC...ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp GAGACCTGCAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATGATCTCTATCTCAGAACACTTCCATaGCTGCTCCTTTGTGATTCA +
Preference number: 4 (lower is better)
Translates to: ETCKSWWLVPHAGKDDLYLRTLP*LLLCDS
Trigger: TGAATCACAAAGGAGCAGGCATGGAAGTGTTCTGAG...ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp TGTCATGTAAAGTCTGGGGGATCTATAATGACTAAAAGATTTGAGAGTCAGAGAAGATGGGCAGGGGCTTaGCACAAGGTGACTGGGAGG +
Preference number: 4 (lower is better)
Translates to: CHVKSGGSIMTKRFESQRRWAGA*HKVTGR
Trigger: CCTCCCAGTCACCTTGTGGCAAGCCCCTGCCCATCT...TCTCTGACTCTCAAATCTTTTAGTCATTATAGATCCCCCAGACTTTACATGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp ATAACAGCACCTTCCAGGGATGGGCACCTGATACAAACTTGGCCTATCAGAGCATCCTCATGTCACAACTaGGAAAGAAGTCATAGAGCT +
Preference number: 4 (lower is better)
Translates to: ITAPSRDGHLIQTWPIRASSCHN*ERSHRA
Trigger: AGCTCTATGACTTCTTTCCCAGTTGTGACATGAGGA...TGCTCTGATAGGCCAAGTTTGTATCAGGTGCCCATCCCTGGAAGGTGCTGTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp CCTATCAGAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTTCCATGAGATTGGACTaGAAGCTTCCATCTTATATA +
Preference number: 4 (lower is better)
Translates to: PIRALPWEFCPWGQRNMGSMRLD*KLPSYI
Trigger: TATATAAGATGGAAGCTTCCAGTCCAATCTCATGGA...ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGATTGGTAGGACCCCATaGTGGACGTATGAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: QHSRVVLCALGPSFCACKIGRTP*WTYEKP
Trigger: TGGCTTCTCATACGTCCACCATGGGGTCCTACCAAT...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGGAGACCTGCAAGAGTTaGTGGCTAGTTCCTCATGCT +
Preference number: 4 (lower is better)
Translates to: QHSRVVLCALGPSFCACKETCKS*WLVPHA
Trigger: AGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp ATAACAGCACCTTCCAGGGATGGGCACCTGATACAAACTTGGCCTATCAGAGCATTCTTTCTTTGTTCTTaGTCTCAGTGTTTGGCCACC +
Preference number: 4 (lower is better)
Translates to: ITAPSRDGHLIQTWPIRAFFLCS*SQCLAT
Trigger: GGTGGCCAAACACTGAGACCAAGAACAAAGAAAGAA...TGCTCTGATAGGCCAAGTTTGTATCAGGTGCCCATCCCTGGAAGGTGCTGTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541347.5
CDS-3UTR TCA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGAGGTTGGCAGTAGCATaGATGATGGGGTATTTTCCC +
Preference number: 4 (lower is better)
Translates to: QHSRVVLCALGPSFCACKRLAVA*MMGYFP
Trigger: GGGAAAATACCCCATCATTCATGCTACTGCCAACCT...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGTCAGAGAAGGAGCAATaGATCTCCATCACTCGTGTG +
Preference number: 4 (lower is better)
Translates to: QHSRVVLCALGPSFCACKSEKEQ*ISITRV
Trigger: CACACGAGTGATGGAGATGCATTGCTCCTTCTCTGA...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGACACCCTTTTGCTTGTaGCACAATATGAACAATATT +
Preference number: 4 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVTPFCL*HNMNNI
Trigger: AATATTGTTCATATTGTGGCACAAGCAAAAGGGTGT...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp TGTCATGTAAAGTCTGGGGGATCTATAATGACTAAAAGATTTGAGAGTCAGAGAGCAGTGGGGAGCCCTTaGAGGTTTGGGGACATGATG +
Preference number: 4 (lower is better)
Translates to: CHVKSGGSIMTKRFESQRAVGSP*RFGDMM
Trigger: CATCATGTCCCCAAACCTGCAAGGGCTCCCCACTGC...TCTCTGACTCTCAAATCTTTTAGTCATTATAGATCCCCCAGACTTTACATGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGGTAGACACAAGGCTTTaGGATTCCCTTCAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: QHSRVVLCALGPSFCACKVDTRL*DSLQRR
Trigger: CCTTCTCTGAAGGGAATCCCAAAGCCTTGTGTCTAC...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp ATAACAGCACCTTCCAGGGATGGGCACCTGATACAAACTTGGCCTATCAGAGCAGGTAAGGGTGATGTGTaGCATTTGTTTTGTGTAATC +
Preference number: 4 (lower is better)
Translates to: ITAPSRDGHLIQTWPIRAGKGDV*HLFCVI
Trigger: GATTACACAAAACAAATGCCACACATCACCCTTACC...TGCTCTGATAGGCCAAGTTTGTATCAGGTGCCCATCCCTGGAAGGTGCTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGTTTGTCCCAAGCTACTaGAGTTGGGGTTGGAATCCA +
Preference number: 4 (lower is better)
Translates to: QHSRVVLCALGPSFCACKFVPSY*SWGWNP
Trigger: TGGATTCCAACCCCAACTCCAGTAGCTTGGGACAAA...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR CAA 72 bp TTTCCCCTCACTTTGAGGGCTCAGACACCCTTTTGCTaGTGCCACAATATGAACAATATTCACCACCCTCAT +
Preference number: 4 (lower is better)
Translates to: FPLTLRAQTPFC*CHNMNNIHHPH
Trigger: ATGAGGGTGGTGAATATTGTTCATATTGTGGCACAAGCAAAAGGGTGTCTGAGCCCTCAAAGTGAGGGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR CAA 72 bp CTGGATCAGGCACATGGTAAGGGTGATGTGTGGCATTaGTTTTGTGTAATCAGAATAGTACCCACCCATCCA +
Preference number: 4 (lower is better)
Translates to: LDQAHGKGDVWH*FCVIRIVPTHP
Trigger: TGGATGGGTGGGTACTATTCTGATTACACAAAACAAATGCCACACATCACCCTTACCATGTGCCTGATCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp GAGACCTGCAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATGATCTCTATAAAGTTTTCTGTCACTaGTTCAGGGAACTGATCCAT +
Preference number: 4 (lower is better)
Translates to: ETCKSWWLVPHAGKDDLYKVFCH*FRELIH
Trigger: ATGGATCAGTTCCCTGAATCAGTGACAGAAAACTTT...ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGGCTTGTGCCACAATATaGACAATATTCACCACCCTC +
Preference number: 4 (lower is better)
Translates to: QHSRVVLCALGPSFCACKACATI*TIFTTL
Trigger: GAGGGTGGTGAATATTGTTCATATTGTGGCACAAGC...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGGAGAAGCCAAGCATTTaGGTTTTGACTCGATGCAGT +
Preference number: 4 (lower is better)
Translates to: QHSRVVLCALGPSFCACKEKPSI*VLTRCS
Trigger: ACTGCATCGAGTCAAAACTCAAATGCTTGGCTTCTC...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGGCAACAATGGCTAAATaGAACCGTCTCAGTCACACT +
Preference number: 4 (lower is better)
Translates to: QHSRVVLCALGPSFCACKATMAK*NRLSHT
Trigger: AGTGTGACTGAGACGGTTGCATTTAGCCATTGTTGC...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp ATAACAGCACCTTCCAGGGATGGGCACCTGATACAAACTTGGCCTATCAGAGCAGGAAATATGTATTTCTaGTTCTCCATGAGATTGGAC +
Preference number: 4 (lower is better)
Translates to: ITAPSRDGHLIQTWPIRAGNMYF*FSMRLD
Trigger: GTCCAATCTCATGGAGAAGCAGAAATACATATTTCC...TGCTCTGATAGGCCAAGTTTGTATCAGGTGCCCATCCCTGGAAGGTGCTGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGAAAAGGGTTGAGACCTaGAAGAGTTGGTGGCTAGTT +
Preference number: 4 (lower is better)
Translates to: QHSRVVLCALGPSFCACKKRVET*KSWWLV
Trigger: AACTAGCCACCAACTCTTGCAGGTCTCAACCCTTTT...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp TGTCATGTAAAGTCTGGGGGATCTATAATGACTAAAAGATTTGAGAGTCAGAGAGGCACAGCACAGCAGTaGCAGGTGTGGAAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: CHVKSGGSIMTKRFESQRGTAQQ*QVWKAE
Trigger: TTCTGCTTTCCACACCTGGCACTGCTGTGCTGTGCC...TCTCTGACTCTCAAATCTTTTAGTCATTATAGATCCCCCAGACTTTACATGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGTTTGTGAACATGAACTaGGGTGCTGCCACCAAAATG +
Preference number: 4 (lower is better)
Translates to: QHSRVVLCALGPSFCACKFVNMN*GAATKM
Trigger: CATTTTGGTGGCAGCACCCCAGTTCATGTTCACAAA...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGGGATTCAGGCAACAATaGCTAAATGCAACCGTCTCA +
Preference number: 4 (lower is better)
Translates to: QHSRVVLCALGPSFCACKGFRQQ*LNATVS
Trigger: TGAGACGGTTGCATTTAGCCATTGTTGCCTGAATCC...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp TGTCATGTAAAGTCTGGGGGATCTATAATGACTAAAAGATTTGAGAGTCAGAGAGAGGGAATTCTAGCTTaGCTCAGGCCCTGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: CHVKSGGSIMTKRFESQREGILA*LRPWFP
Trigger: GGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTC...TCTCTGACTCTCAAATCTTTTAGTCATTATAGATCCCCCAGACTTTACATGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp TGTCATGTAAAGTCTGGGGGATCTATAATGACTAAAAGATTTGAGAGTCAGAGAGGAGGTAAATGTCGGTaGCACTCTTGGGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: CHVKSGGSIMTKRFESQRGGKCR*HSWASC
Trigger: GCAAGAAGCCCAAGAGTGTCACCGACATTTACCTCC...TCTCTGACTCTCAAATCTTTTAGTCATTATAGATCCCCCAGACTTTACATGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGCAGCAAATGCATAGATaGGAGGATTCAGGCAACAAT +
Preference number: 4 (lower is better)
Translates to: QHSRVVLCALGPSFCACKQQMHR*EDSGNN
Trigger: ATTGTTGCCTGAATCCTCTCATCTATGCATTTGCTG...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGAGGATGATCTCTATGTaGAAGGTACCTTATCCCTCT +
Preference number: 4 (lower is better)
Translates to: QHSRVVLCALGPSFCACKRMISM*KVPYPS
Trigger: AGAGGGATAAGGTACCTTTCACATAGAGATCATCCT...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGTCATGCTGGAAAGGATaGTCTCTATGTGAAAGGTAC +
Preference number: 4 (lower is better)
Translates to: QHSRVVLCALGPSFCACKSCWKG*SLCERY
Trigger: GTACCTTTCACATAGAGATCATCCTTTCCAGCATGA...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp TGTCATGTAAAGTCTGGGGGATCTATAATGACTAAAAGATTTGAGAGTCAGAGAATCAGAGCACTTCCCTaGGAATTTTGCCCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: CHVKSGGSIMTKRFESQRIRALP*EFCPWG
Trigger: GCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGAT...TCTCTGACTCTCAAATCTTTTAGTCATTATAGATCCCCCAGACTTTACATGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp TGTCATGTAAAGTCTGGGGGATCTATAATGACTAAAAGATTTGAGAGTCAGAGAAATCAGGGGAGAGGCTaGATCAGGCACATGGTAAGG +
Preference number: 4 (lower is better)
Translates to: CHVKSGGSIMTKRFESQRNQGRG*IRHMVR
Trigger: CCTTACCATGTGCCTGATCCAGCCTCTCCCCTGATT...TCTCTGACTCTCAAATCTTTTAGTCATTATAGATCCCCCAGACTTTACATGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp TGTCATGTAAAGTCTGGGGGATCTATAATGACTAAAAGATTTGAGAGTCAGAGAGCAGTCCAGGAGAGTTaGGTTACGGAAGGCTATCAC +
Preference number: 4 (lower is better)
Translates to: CHVKSGGSIMTKRFESQRAVQES*VTEGYH
Trigger: GTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC...TCTCTGACTCTCAAATCTTTTAGTCATTATAGATCCCCCAGACTTTACATGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp TGTCATGTAAAGTCTGGGGGATCTATAATGACTAAAAGATTTGAGAGTCAGAGATTCTATTTCCCTTACTaGCCTGGGAGCAGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: CHVKSGGSIMTKRFESQRFYFPY*PGSRWR
Trigger: TCTCCACCTGCTCCCAGGCCAGTAAGGGAAATAGAA...TCTCTGACTCTCAAATCTTTTAGTCATTATAGATCCCCCAGACTTTACATGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR CAA 72 bp TTTGAGCACAATTCTCAACAACACTCTAGGGTTGTTTaGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAG +
Preference number: 4 (lower is better)
Translates to: FEHNSQQHSRVV*CALGPSFCACK
Trigger: CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTGTTGAGAATTGTGCTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp TGTCATGTAAAGTCTGGGGGATCTATAATGACTAAAAGATTTGAGAGTCAGAGAGTAGACACAAGGCTTTaGGATTCCCTTCAGAGAAGG +
Preference number: 4 (lower is better)
Translates to: CHVKSGGSIMTKRFESQRVDTRL*DSLQRR
Trigger: CCTTCTCTGAAGGGAATCCCAAAGCCTTGTGTCTAC...TCTCTGACTCTCAAATCTTTTAGTCATTATAGATCCCCCAGACTTTACATGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp TGTCATGTAAAGTCTGGGGGATCTATAATGACTAAAAGATTTGAGAGTCAGAGATATATCCCTTCCCCATaGATAACAGCACCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: CHVKSGGSIMTKRFESQRYIPSP*ITAPSR
Trigger: CCTGGAAGGTGCTGTTATCCATGGGGAAGGGATATA...TCTCTGACTCTCAAATCTTTTAGTCATTATAGATCCCCCAGACTTTACATGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp TGTCATGTAAAGTCTGGGGGATCTATAATGACTAAAAGATTTGAGAGTCAGAGAAATTTGTTTCCACATTaGGGAGCACGGGCCAGATTT +
Preference number: 4 (lower is better)
Translates to: CHVKSGGSIMTKRFESQRNLFPH*GARARF
Trigger: AAATCTGGCCCGTGCTCCGCAATGTGGAAACAAATT...TCTCTGACTCTCAAATCTTTTAGTCATTATAGATCCCCCAGACTTTACATGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp TGTCATGTAAAGTCTGGGGGATCTATAATGACTAAAAGATTTGAGAGTCAGAGAGAACACTTCCATGCCTaGTCCTTTGTGATTCAGATG +
Preference number: 4 (lower is better)
Translates to: CHVKSGGSIMTKRFESQREHFHA*SFVIQM
Trigger: CATCTGAATCACAAAGGAGCAGGCATGGAAGTGTTC...TCTCTGACTCTCAAATCTTTTAGTCATTATAGATCCCCCAGACTTTACATGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp TGTCATGTAAAGTCTGGGGGATCTATAATGACTAAAAGATTTGAGAGTCAGAGATTTGTGAACATGAACTaGGGTGCTGCCACCAAAATG +
Preference number: 4 (lower is better)
Translates to: CHVKSGGSIMTKRFESQRFVNMN*GAATKM
Trigger: CATTTTGGTGGCAGCACCCCAGTTCATGTTCACAAA...TCTCTGACTCTCAAATCTTTTAGTCATTATAGATCCCCCAGACTTTACATGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp TGTCATGTAAAGTCTGGGGGATCTATAATGACTAAAAGATTTGAGAGTCAGAGAGCTTTGGCTTTCTTGTaGTTCTTGCAGGAAAACAGC +
Preference number: 4 (lower is better)
Translates to: CHVKSGGSIMTKRFESQRALAFL*FLQENS
Trigger: GCTGTTTTCCTGCAAGAACCACAAGAAAGCCAAAGC...TCTCTGACTCTCAAATCTTTTAGTCATTATAGATCCCCCAGACTTTACATGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR TCA 90 bp TGTCATGTAAAGTCTGGGGGATCTATAATGACTAAAAGATTTGAGAGTCAGAGACAGCAAATGCATAGATaGGAGGATTCAGGCAACAAT +
Preference number: 4 (lower is better)
Translates to: CHVKSGGSIMTKRFESQRQQMHR*EDSGNN
Trigger: ATTGTTGCCTGAATCCTCTCATCTATGCATTTGCTG...TCTCTGACTCTCAAATCTTTTAGTCATTATAGATCCCCCAGACTTTACATGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
3UTR CAA 72 bp ACAAGGTCTGGACGGGTGAATACAGGAATGACAATATaGATGTGGTTAGATTGGATGACTTTTTCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: TRSGRVNTGMTI*MWLDWMTFSLA
Trigger: TGCTAAAGAAAAAGTCATCCAATCTAACCACATCAATATTGTCATTCCTGTATTCACCCGTCCAGACCTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp TGTCATGTAAAGTCTGGGGGATCTATAATGACTAAAAGATTTGAGAGTCAGAGAGGTAAGGGTGATGTGTaGCATTTGTTTTGTGTAATC +
Preference number: 4 (lower is better)
Translates to: CHVKSGGSIMTKRFESQRGKGDV*HLFCVI
Trigger: GATTACACAAAACAAATGCCACACATCACCCTTACC...TCTCTGACTCTCAAATCTTTTAGTCATTATAGATCCCCCAGACTTTACATGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CCA 90 bp TGTCATGTAAAGTCTGGGGGATCTATAATGACTAAAAGATTTGAGAGTCAGAGATCCATGAGATTGGACTaGAAGCTTCCATCTTATATA +
Preference number: 4 (lower is better)
Translates to: CHVKSGGSIMTKRFESQRSMRLD*KLPSYI
Trigger: TATATAAGATGGAAGCTTCCAGTCCAATCTCATGGA...TCTCTGACTCTCAAATCTTTTAGTCATTATAGATCCCCCAGACTTTACATGACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR GCA 90 bp TGTCATGTAAAGTCTGGGGGATCTATAATGACTAAAAGATTTGAGAGTCAGAGAACACCCTTTTGCTTGTaGCACAATATGAACAATATT +
Preference number: 4 (lower is better)
Translates to: CHVKSGGSIMTKRFESQRTPFCL*HNMNNI
Trigger: AATATTGTTCATATTGTGGCACAAGCAAAAGGGTGT...TCTCTGACTCTCAAATCTTTTAGTCATTATAGATCCCCCAGACTTTACATGACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS GCA 90 bp GAGCCTTCAGGAAGCTGGGAGAGCTCATGGGGCCCTCAGCTTCCCTaGCCACGAGAGGGAGCCCAGAGTACTCACTGGACCACACTGGGG +
Preference number: 5 (lower is better)
Translates to: EPSGSWESSWGPQLP*PREGAQSTHWTTLG
Trigger: CCCCAGTGTGGTCCAGTGAGTACTCTGGGCTCCCTCTCGTGGGCAGGGAAGCTGAGGGCCCCATGAGCTCTCCCAGCTTCCTGAAGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435290.1
ENST00000542107.5
CDS GCA 90 bp AAAATGGCTGCTGCCCAGACGCCTAGGCTGATGGTGACGCCATGCTaGACGGTCCGGTTGTTCATGGAGTTGGCGGCCAGGACGATGGCC +
Preference number: 5 (lower is better)
Translates to: KMAAAQTPRLMVTPC*TVRLFMELAARTMA
Trigger: GGCCATCGTCCTGGCCGCCAACTCCATGAACAACCGGACCGTGCAGCATGGCGTCACCATCAGCCTAGGCGTCTGGGCAGCAGCCATTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000435290.1
ENST00000541347.5
ENST00000542107.5
CDS GCA 90 bp ACCAAAATGGCTGCTGCCCAGACGCCTAGGCTGATGGTGACGCCATaGTGCACGGTCCGGTTGTTCATGGAGTTGGCGGCCAGGACGATG +
Preference number: 5 (lower is better)
Translates to: TKMAAAQTPRLMVTP*CTVRLFMELAARTM
Trigger: CATCGTCCTGGCCGCCAACTCCATGAACAACCGGACCGTGCAGCATGGCGTCACCATCAGCCTAGGCGTCTGGGCAGCAGCCATTTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000435290.1
ENST00000541347.5
ENST00000542107.5
CDS CCA 90 bp TCAGCTCTCATTAATGGGGAGCCTTCAGGAAGCTGGGAGAGCTCATaGGGCCCTCAGCTTCCCTGCCCACGAGAGGGAGCCCAGAGTACT +
Preference number: 5 (lower is better)
Translates to: SALINGEPSGSWESS*GPQLPCPREGAQST
Trigger: AGTACTCTGGGCTCCCTCTCGTGGGCAGGGAAGCTGAGGGCCCCATGAGCTCTCCCAGCTTCCTGAAGGCTCCCCATTAATGAGAGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000435290.1
ENST00000542107.5
CDS-3UTR CAA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGTGCAGTGCTGCGGGCTaGGTGGCCTGCTCATGGTGG +
Preference number: 5 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRCSAAG*VACSWW
Trigger: CCACCATGAGCAGGCCACCAAGCCCGCAGCACTGCA...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541347.5
CDS GCA 90 bp GGACAGAGCTGGGGGCTGCAGTGCAGTGCTGCGGGCTTGGTGGCCTaGTCATGGTGGAAGAAGTCCACCAGCAGTTTTCTTTCTTTGTTC +
Preference number: 5 (lower is better)
Translates to: GQSWGLQCSAAGLVA*SWWKKSTSSFLSLF
Trigger: GAACAAAGAAAGAAAACTGCTGGTGGACTTCTTCCACCATGAGCAGGCCACCAAGCCCGCAGCACTGCACTGCAGCCCCCAGCTCTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412814.1
ENST00000541347.5
CDS-3UTR CAA 90 bp CCTATCAGAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTTGCTGCACGGTCCGGTaGTTCATGGAGTTGGCGGCC +
Preference number: 5 (lower is better)
Translates to: PIRALPWEFCPWGQRNMGCCTVR*FMELAA
Trigger: GGCCGCCAACTCCATGAACAACCGGACCGTGCAGCA...ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCTGCTGCACGGTCCGGTaGTTCATGGAGTTGGCGGCC +
Preference number: 5 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLCCTVR*FMELAA
Trigger: GGCCGCCAACTCCATGAACAACCGGACCGTGCAGCA...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCAGATGGGCAGGGGCTaGCCACAAGGTGACTGGGAG +
Preference number: 5 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVQMGRG*PQGDWE
Trigger: CTCCCAGTCACCTTGTGGCAAGCCCCTGCCCATCTG...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTGATGGGTGGAGTCCTTaGGGAAGGAGGAGGCAATGG +
Preference number: 5 (lower is better)
Translates to: ESQREGILAWLRPWFPLTDGWSP*GRRRQW
Trigger: CCATTGCCTCCTCCTTCCCAAAGGACTCCACCCATC...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCGATGGGTGGAGTCCTTaGGGAAGGAGGAGGCAATGG +
Preference number: 5 (lower is better)
Translates to: EHFPGNFALGARETWVSVDGWSP*GRRRQW
Trigger: CCATTGCCTCCTCCTTCCCAAAGGACTCCACCCATC...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCTGTCAGCACCACAACTaGGGCACAGCACAGCAGTGC +
Preference number: 5 (lower is better)
Translates to: EHFPGNFALGARETWVSVCQHHN*GTAQQC
Trigger: GCACTGCTGTGCTGTGCCCAAGTTGTGGTGCTGACA...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTCAGATGGGCAGGGGCTaGCCACAAGGTGACTGGGAG +
Preference number: 5 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPQMGRG*PQGDWE
Trigger: CTCCCAGTCACCTTGTGGCAAGCCCCTGCCCATCTG...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp CCTATCAGAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTCACCTTTCCCTGCCTTaGGCCAGAAGGCCACAGGAC +
Preference number: 5 (lower is better)
Translates to: PIRALPWEFCPWGQRNMGHLSLP*ARRPQD
Trigger: GTCCTGTGGCCTTCTGGCCAAAGGCAGGGAAAGGTG...ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541347.5
CDS-3UTR CAA 90 bp ATAACAGCACCTTCCAGGGATGGGCACCTGATACAAACTTGGCCTATCAGAGCACGGTTGTTCATGGAGTaGGCGGCCAGGACGATGGCC +
Preference number: 5 (lower is better)
Translates to: ITAPSRDGHLIQTWPIRARLFME*AARTMA
Trigger: GGCCATCGTCCTGGCCGCCAACTCCATGAACAACCG...TGCTCTGATAGGCCAAGTTTGTATCAGGTGCCCATCCCTGGAAGGTGCTGTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp ATAACAGCACCTTCCAGGGATGGGCACCTGATACAAACTTGGCCTATCAGAGCATGCTGCACGGTCCGGTaGTTCATGGAGTTGGCGGCC +
Preference number: 5 (lower is better)
Translates to: ITAPSRDGHLIQTWPIRACCTVR*FMELAA
Trigger: GGCCGCCAACTCCATGAACAACCGGACCGTGCAGCA...TGCTCTGATAGGCCAAGTTTGTATCAGGTGCCCATCCCTGGAAGGTGCTGTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCCTGGGAATTTTGCCCTaGGGGCCAGAGAAACATGGG +
Preference number: 5 (lower is better)
Translates to: EHFPGNFALGARETWVSVLGILP*GPEKHG
Trigger: CCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAG...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTCCCAAGCTACTGGAGTaGGGGTTGGAATCCATCCCT +
Preference number: 5 (lower is better)
Translates to: ESQREGILAWLRPWFPLTPKLLE*GLESIP
Trigger: AGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGG...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGTGTCAGCACCACAACTaGGGCACAGCACAGCAGTGC +
Preference number: 5 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRCQHHN*GTAQQC
Trigger: GCACTGCTGTGCTGTGCCCAAGTTGTGGTGCTGACA...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTGGCAGTCCAGGAGAGTaGGGTTACGGAAGGCTATCA +
Preference number: 5 (lower is better)
Translates to: ESQREGILAWLRPWFPLTGSPGE*GYGRLS
Trigger: TGATAGCCTTCCGTAACCCAACTCTCCTGGACTGCC...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCACACTCTTGGGCTTCTaGCTGTTGGTGAGGGCAAAC +
Preference number: 5 (lower is better)
Translates to: EHFPGNFALGARETWVSVTLLGF*LLVRAN
Trigger: GTTTGCCCTCACCAACAGCAAGAAGCCCAAGAGTGT...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTATGTCGGTGACACTCTaGGGCTTCTTGCTGTTGGTG +
Preference number: 5 (lower is better)
Translates to: ESQREGILAWLRPWFPLTMSVTL*GFLLLV
Trigger: CACCAACAGCAAGAAGCCCAAGAGTGTCACCGACAT...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GAGACCTGCAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATGATCTCTATCGGTTGTTCATGGAGTaGGCGGCCAGGACGATGGCC +
Preference number: 5 (lower is better)
Translates to: ETCKSWWLVPHAGKDDLYRLFME*AARTMA
Trigger: GGCCATCGTCCTGGCCGCCAACTCCATGAACAACCG...ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTTGGTTTCCCCTCACTTaGAGGGCTCAGACACCCTTT +
Preference number: 5 (lower is better)
Translates to: ESQREGILAWLRPWFPLTWFPLT*RAQTPF
Trigger: AAAGGGTGTCTGAGCCCTCAAAGTGAGGGGAAACCA...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp CCTATCAGAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTCTGGGAATTTTGCCCTaGGGGCCAGAGAAACATGGG +
Preference number: 5 (lower is better)
Translates to: PIRALPWEFCPWGQRNMGLGILP*GPEKHG
Trigger: CCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAG...ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCCCCAAGCTACTGGAGTaGGGGTTGGAATCCATCCCT +
Preference number: 5 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLPKLLE*GLESIP
Trigger: AGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGG...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCAGGCTCTTCCAAGCTTaGTCAGCACCACAACTTGGG +
Preference number: 5 (lower is better)
Translates to: EHFPGNFALGARETWVSVRLFQA*SAPQLG
Trigger: CCCAAGTTGTGGTGCTGACAAAGCTTGGAAGAGCCT...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCTATCACTCTGTAGACTaGGGAGTGCTCACTGGGTGC +
Preference number: 5 (lower is better)
Translates to: EHFPGNFALGARETWVSVYHSVD*GVLTGC
Trigger: GCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGGGCAGTCCAGGAGAGTaGGGTTACGGAAGGCTATCA +
Preference number: 5 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVGSPGE*GYGRLS
Trigger: TGATAGCCTTCCGTAACCCAACTCTCCTGGACTGCC...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCGGCAGTCCAGGAGAGTaGGGTTACGGAAGGCTATCA +
Preference number: 5 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLGSPGE*GYGRLS
Trigger: TGATAGCCTTCCGTAACCCAACTCTCCTGGACTGCC...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS CCA 90 bp CTTCCATGCCTGCTCCTTTGTGATTCAGATGAGGAGAAATCAACGTaGACTGAGCGCCCACACAGGACAGCCAGGCATTTCCCATACAGG +
Preference number: 5 (lower is better)
Translates to: LPCLLLCDSDEEKST*TERPHRTARHFPYR
Trigger: CCTGTATGGGAAATGCCTGGCTGTCCTGTGTGGGCGCTCAGTCCACGTTGATTTCTCCTCATCTGAATCACAAAGGAGCAGGCATGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGTTGGGCTTCTTGCTGTaGGTGAGGGCAAACACTACC +
Preference number: 5 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVLGFLL*VRANTT
Trigger: GGTAGTGTTTGCCCTCACCAACAGCAAGAAGCCCAA...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCACACTCTTGGGCTTCTaGCTGTTGGTGAGGGCAAAC +
Preference number: 5 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLTLLGF*LLVRAN
Trigger: GTTTGCCCTCACCAACAGCAAGAAGCCCAAGAGTGT...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp CCTATCAGAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTATGTCGGTGACACTCTaGGGCTTCTTGCTGTTGGTG +
Preference number: 5 (lower is better)
Translates to: PIRALPWEFCPWGQRNMGMSVTL*GFLLLV
Trigger: CACCAACAGCAAGAAGCCCAAGAGTGTCACCGACAT...ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGATGTCGGTGACACTCTaGGGCTTCTTGCTGTTGGTG +
Preference number: 5 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVMSVTL*GFLLLV
Trigger: CACCAACAGCAAGAAGCCCAAGAGTGTCACCGACAT...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGATGTCGGTGACACTCTaGGGCTTCTTGCTGTTGGTG +
Preference number: 5 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRMSVTL*GFLLLV
Trigger: CACCAACAGCAAGAAGCCCAAGAGTGTCACCGACAT...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGGCAATGGGGAATCTATaGGTAGGACCCCATGGTGGA +
Preference number: 5 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVAMGNL*VGPHGG
Trigger: TCCACCATGGGGTCCTACCAATAGATTCCCCATTGC...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCAGGCAGACAAAAGGGTaGAGACCTGCAAGAGTTGGT +
Preference number: 5 (lower is better)
Translates to: EHFPGNFALGARETWVSVRQTKG*RPARVG
Trigger: ACCAACTCTTGCAGGTCTCAACCCTTTTGTCTGCCT...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCAGGCTCTTCCAAGCTTaGTCAGCACCACAACTTGGG +
Preference number: 5 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLRLFQA*SAPQLG
Trigger: CCCAAGTTGTGGTGCTGACAAAGCTTGGAAGAGCCT...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp CCTATCAGAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTTATCACTCTGTAGACTaGGGAGTGCTCACTGGGTGC +
Preference number: 5 (lower is better)
Translates to: PIRALPWEFCPWGQRNMGYHSVD*GVLTGC
Trigger: GCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA...ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGTATCACTCTGTAGACTaGGGAGTGCTCACTGGGTGC +
Preference number: 5 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVYHSVD*GVLTGC
Trigger: GCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGTATCACTCTGTAGACTaGGGAGTGCTCACTGGGTGC +
Preference number: 5 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRYHSVD*GVLTGC
Trigger: GCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTTTGGGCTTCTTGCTGTaGGTGAGGGCAAACACTACC +
Preference number: 5 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPLGFLL*VRANTT
Trigger: GGTAGTGTTTGCCCTCACCAACAGCAAGAAGCCCAA...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCAAGGCGGTAGTGAATTaGCACATGGCATTGTGGAGG +
Preference number: 5 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLKAVVN*HMALWR
Trigger: CCTCCACAATGCCATGTGCAAATTCACTACCGCCTT...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGAAGGCGGTAGTGAATTaGCACATGGCATTGTGGAGG +
Preference number: 5 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVKAVVN*HMALWR
Trigger: CCTCCACAATGCCATGTGCAAATTCACTACCGCCTT...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGCGGTTGTTCATGGAGTaGGCGGCCAGGACGATGGCC +
Preference number: 5 (lower is better)
Translates to: QHSRVVLCALGPSFCACKRLFME*AARTMA
Trigger: GGCCATCGTCCTGGCCGCCAACTCCATGAACAACCG...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTAAATTTGTTTCCACATaGCGGAGCACGGGCCAGATT +
Preference number: 5 (lower is better)
Translates to: ESQREGILAWLRPWFPLTKFVST*RSTGQI
Trigger: AATCTGGCCCGTGCTCCGCAATGTGGAAACAAATTT...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTTGTAGACACAAGGCTTaGGGATTCCCTTCAGAGAAG +
Preference number: 5 (lower is better)
Translates to: ESQREGILAWLRPWFPLTCRHKA*GFPSEK
Trigger: CTTCTCTGAAGGGAATCCCAAAGCCTTGTGTCTACA...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTTGGTTTCCCCTCACTTaGAGGGCTCAGACACCCTTT +
Preference number: 5 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPWFPLT*RAQTPF
Trigger: AAAGGGTGTCTGAGCCCTCAAAGTGAGGGGAAACCA...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTCTACTGGAGTTGGGGTaGGAATCCATCCCTTCTTAT +
Preference number: 5 (lower is better)
Translates to: ESQREGILAWLRPWFPLTLLELG*ESIPSY
Trigger: ATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAG...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGAGGCAGACAAAAGGGTaGAGACCTGCAAGAGTTGGT +
Preference number: 5 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVRQTKG*RPARVG
Trigger: ACCAACTCTTGCAGGTCTCAACCCTTTTGTCTGCCT...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp CCTATCAGAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTAGGCAGACAAAAGGGTaGAGACCTGCAAGAGTTGGT +
Preference number: 5 (lower is better)
Translates to: PIRALPWEFCPWGQRNMGRQTKG*RPARVG
Trigger: ACCAACTCTTGCAGGTCTCAACCCTTTTGTCTGCCT...ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGCAGATGGGCAGGGGCTaGCCACAAGGTGACTGGGAG +
Preference number: 5 (lower is better)
Translates to: QHSRVVLCALGPSFCACKQMGRG*PQGDWE
Trigger: CTCCCAGTCACCTTGTGGCAAGCCCCTGCCCATCTG...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS GCA 90 bp CCCAGCAAATGCATAGATGAGAGGATTCAGGCAACAATGGCTAAATaGAACCGTCTCAGTCACACTGAGGGCCAGCCTCAGATCCTTCCT +
Preference number: 5 (lower is better)
Translates to: PSKCIDERIQATMAK*NRLSHTEGQPQILP
Trigger: AGGAAGGATCTGAGGCTGGCCCTCAGTGTGACTGAGACGGTTGCATTTAGCCATTGTTGCCTGAATCCTCTCATCTATGCATTTGCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp CCTATCAGAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTAAATTTGTTTCCACATaGCGGAGCACGGGCCAGATT +
Preference number: 5 (lower is better)
Translates to: PIRALPWEFCPWGQRNMGKFVST*RSTGQI
Trigger: AATCTGGCCCGTGCTCCGCAATGTGGAAACAAATTT...ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCAAATTTGTTTCCACATaGCGGAGCACGGGCCAGATT +
Preference number: 5 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLKFVST*RSTGQI
Trigger: AATCTGGCCCGTGCTCCGCAATGTGGAAACAAATTT...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGTGTAGACACAAGGCTTaGGGATTCCCTTCAGAGAAG +
Preference number: 5 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVCRHKA*GFPSEK
Trigger: CTTCTCTGAAGGGAATCCCAAAGCCTTGTGTCTACA...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTAACAACACTCTAGGGTaGTTTTGTGTGCATTGGGTC +
Preference number: 5 (lower is better)
Translates to: ESQREGILAWLRPWFPLTNNTLG*FCVHWV
Trigger: GACCCAATGCACACAAAACAACCCTAGAGTGTTGTT...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCTCCATCCCTTCTTATTaGGGGGCAGGGTTTTTCTAT +
Preference number: 5 (lower is better)
Translates to: EHFPGNFALGARETWVSVSIPSY*GAGFFY
Trigger: ATAGAAAAACCCTGCCCCCAAATAAGAAGGGATGGA...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGCTACTGGAGTTGGGGTaGGAATCCATCCCTTCTTAT +
Preference number: 5 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRLLELG*ESIPSY
Trigger: ATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAG...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS TCA 90 bp ATAACAGGCCTCAGCCAAATCATCGTACTCAAAGTTTTCTGTCACTaGTTCAGGGAACTGATCCATGGTGAAGGCCTGGCGTGGACTGCC +
Preference number: 5 (lower is better)
Translates to: ITGLSQIIVLKVFCH*FRELIHGEGLAWTA
Trigger: GGCAGTCCACGCCAGGCCTTCACCATGGATCAGTTCCCTGAATCAGTGACAGAAAACTTTGAGTACGATGATTTGGCTGAGGCCTGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399220.3
CDS-3UTR CAA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTAATTTGCACATGGCATaGTGGAGGCCCTTTTCATTT +
Preference number: 5 (lower is better)
Translates to: ESQREGILAWLRPWFPLTNLHMA*WRPFSF
Trigger: AAATGAAAAGGGCCTCCACAATGCCATGTGCAAATT...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTAAATTTGTTTCCACATaGCGGAGCACGGGCCAGATT +
Preference number: 5 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPKFVST*RSTGQI
Trigger: AATCTGGCCCGTGCTCCGCAATGTGGAAACAAATTT...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGGGAAGCCAAGAAAATTaGTTTCCACATTGCGGAGCA +
Preference number: 5 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRGSQEN*FPHCGA
Trigger: TGCTCCGCAATGTGGAAACAAATTTTCTTGGCTTCC...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGATGGCTTTGGCTTTCTaGTGGTTCTTGCAGGAAAAC +
Preference number: 5 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVMALAF*WFLQEN
Trigger: GTTTTCCTGCAAGAACCACAAGAAAGCCAAAGCCAT...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGGTTGTTTTGTGTGCATaGGGTCCATCATTTTGTGCC +
Preference number: 5 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRVVLCA*GPSFCA
Trigger: GGCACAAAATGATGGACCCAATGCACACAAAACAAC...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp CCTATCAGAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTTGTTTTGTGTGCATaGGGTCCATCATTTTGTGCC +
Preference number: 5 (lower is better)
Translates to: PIRALPWEFCPWGQRNMGVVLCA*GPSFCA
Trigger: GGCACAAAATGATGGACCCAATGCACACAAAACAAC...ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCAACAACACTCTAGGGTaGTTTTGTGTGCATTGGGTC +
Preference number: 5 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLNNTLG*FCVHWV
Trigger: GACCCAATGCACACAAAACAACCCTAGAGTGTTGTT...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCCAGACACCCTTTTGCTaGTGCCACAATATGAACAAT +
Preference number: 5 (lower is better)
Translates to: EHFPGNFALGARETWVSVQTPFC*CHNMNN
Trigger: ATTGTTCATATTGTGGCACAAGCAAAAGGGTGTCTG...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GAGACCTGCAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATGATCTCTATGCAATGGGGAATCTATaGGTAGGACCCCATGGTGGA +
Preference number: 5 (lower is better)
Translates to: ETCKSWWLVPHAGKDDLYAMGNL*VGPHGG
Trigger: TCCACCATGGGGTCCTACCAATAGATTCCCCATTGC...ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTAAACTGAAGCTTGATTaGTCCCAAGCTACTGGAGTT +
Preference number: 5 (lower is better)
Translates to: ESQREGILAWLRPWFPLTKLKLD*SQATGV
Trigger: AACTCCAGTAGCTTGGGACAAATCAAGCTTCAGTTT...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp ATAACAGCACCTTCCAGGGATGGGCACCTGATACAAACTTGGCCTATCAGAGCAAGGCAGACAAAAGGGTaGAGACCTGCAAGAGTTGGT +
Preference number: 5 (lower is better)
Translates to: ITAPSRDGHLIQTWPIRARQTKG*RPARVG
Trigger: ACCAACTCTTGCAGGTCTCAACCCTTTTGTCTGCCT...TGCTCTGATAGGCCAAGTTTGTATCAGGTGCCCATCCCTGGAAGGTGCTGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGTGTCAGCACCACAACTaGGGCACAGCACAGCAGTGC +
Preference number: 5 (lower is better)
Translates to: QHSRVVLCALGPSFCACKCQHHN*GTAQQC
Trigger: GCACTGCTGTGCTGTGCCCAAGTTGTGGTGCTGACA...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GAGACCTGCAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATGATCTCTATTCTTGGTCTCAGTGTTaGGCCACCTTTCCCTGCCTT +
Preference number: 5 (lower is better)
Translates to: ETCKSWWLVPHAGKDDLYSWSQC*ATFPCL
Trigger: AAGGCAGGGAAAGGTGGCCAAACACTGAGACCAAGA...ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541347.5
CDS TCA 90 bp ATAACAGGCCTCAGCCAAATCATCGTACTCAAAGTTTTCTGTCACTaGTTCAGGGAACTGATCCATGGTGAAGGCCCCAACCTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: ITGLSQIIVLKVFCH*FRELIHGEGPNLEV
Trigger: CACCTCCAGGTTGGGGCCTTCACCATGGATCAGTTCCCTGAATCAGTGACAGAAAACTTTGAGTACGATGATTTGGCTGAGGCCTGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435290.1
ENST00000542107.5
CDS-3UTR CAA 90 bp CCTATCAGAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTAATTTGCACATGGCATaGTGGAGGCCCTTTTCATTT +
Preference number: 5 (lower is better)
Translates to: PIRALPWEFCPWGQRNMGNLHMA*WRPFSF
Trigger: AAATGAAAAGGGCCTCCACAATGCCATGTGCAAATT...ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GAGACCTGCAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATGATCTCTATAAGGCGGTAGTGAATTaGCACATGGCATTGTGGAGG +
Preference number: 5 (lower is better)
Translates to: ETCKSWWLVPHAGKDDLYKAVVN*HMALWR
Trigger: CCTCCACAATGCCATGTGCAAATTCACTACCGCCTT...ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTGGAAGCCAAGAAAATTaGTTTCCACATTGCGGAGCA +
Preference number: 5 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPGSQEN*FPHCGA
Trigger: TGCTCCGCAATGTGGAAACAAATTTTCTTGGCTTCC...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTATGGCTTTGGCTTTCTaGTGGTTCTTGCAGGAAAAC +
Preference number: 5 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPMALAF*WFLQEN
Trigger: GTTTTCCTGCAAGAACCACAAGAAAGCCAAAGCCAT...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTGTTGTTTTGTGTGCATaGGGTCCATCATTTTGTGCC +
Preference number: 5 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPVVLCA*GPSFCA
Trigger: GGCACAAAATGATGGACCCAATGCACACAAAACAAC...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGCAGACACCCTTTTGCTaGTGCCACAATATGAACAAT +
Preference number: 5 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRQTPFC*CHNMNN
Trigger: ATTGTTCATATTGTGGCACAAGCAAAAGGGTGTCTG...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCAGACACCCTTTTGCTaGTGCCACAATATGAACAAT +
Preference number: 5 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVQTPFC*CHNMNN
Trigger: ATTGTTCATATTGTGGCACAAGCAAAAGGGTGTCTG...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GAGAGTCAGAGAGAGGGAATTCTAGCTTGGCTCAGGCCCTGGTTTCCCCTCACTCACCCATCCAACTTCTaGGAAATATGTATTTCTGCT +
Preference number: 5 (lower is better)
Translates to: ESQREGILAWLRPWFPLTHPSNF*EICISA
Trigger: AGCAGAAATACATATTTCCAAGAAGTTGGATGGGTG...AGTGAGGGGAAACCAGGGCCTGAGCCAAGCTAGAATTCCCTCTCTCTGACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGCCCAAGCTACTGGAGTaGGGGTTGGAATCCATCCCT +
Preference number: 5 (lower is better)
Translates to: QHSRVVLCALGPSFCACKPKLLE*GLESIP
Trigger: AGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGG...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGGGCAGTCCAGGAGAGTaGGGTTACGGAAGGCTATCA +
Preference number: 5 (lower is better)
Translates to: QHSRVVLCALGPSFCACKGSPGE*GYGRLS
Trigger: TGATAGCCTTCCGTAACCCAACTCTCCTGGACTGCC...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS TCA 90 bp ATAACAGGCCTCAGCCAAATCATCGTACTCAAAGTTTTCTGTCACTaGTTCAGGGAACTGATCCATGGTGAAGGCCCCACTGGCCATTCT +
Preference number: 5 (lower is better)
Translates to: ITGLSQIIVLKVFCH*FRELIHGEGPTGHS
Trigger: AGAATGGCCAGTGGGGCCTTCACCATGGATCAGTTCCCTGAATCAGTGACAGAAAACTTTGAGTACGATGATTTGGCTGAGGCCTGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358309.3
CDS-3UTR CAA 90 bp GAGACCTGCAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATGATCTCTATTGTAGACACAAGGCTTaGGGATTCCCTTCAGAGAAG +
Preference number: 5 (lower is better)
Translates to: ETCKSWWLVPHAGKDDLYCRHKA*GFPSEK
Trigger: CTTCTCTGAAGGGAATCCCAAAGCCTTGTGTCTACA...ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GAGACCTGCAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATGATCTCTATCACTCTAGGGTTGTTTaGTGTGCATTGGGTCCATCA +
Preference number: 5 (lower is better)
Translates to: ETCKSWWLVPHAGKDDLYHSRVV*CALGPS
Trigger: TGATGGACCCAATGCACACAAAACAACCCTAGAGTG...ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGTGGTTTCCCCTCACTTaGAGGGCTCAGACACCCTTT +
Preference number: 5 (lower is better)
Translates to: QHSRVVLCALGPSFCACKWFPLT*RAQTPF
Trigger: AAAGGGTGTCTGAGCCCTCAAAGTGAGGGGAAACCA...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCACCCATCCAACTTCTaGGAAATATGTATTTCTGCT +
Preference number: 5 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVHPSNF*EICISA
Trigger: AGCAGAAATACATATTTCCAAGAAGTTGGATGGGTG...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp CCTATCAGAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTCACCCATCCAACTTCTaGGAAATATGTATTTCTGCT +
Preference number: 5 (lower is better)
Translates to: PIRALPWEFCPWGQRNMGHPSNF*EICISA
Trigger: AGCAGAAATACATATTTCCAAGAAGTTGGATGGGTG...ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp TCCCAAGCTACTGGAGTTGGGGTTGGAATCCATCCCTTCTTATTTGGGGGCAGGCACCCATCCAACTTCTaGGAAATATGTATTTCTGCT +
Preference number: 5 (lower is better)
Translates to: SQATGVGVGIHPFLFGGRHPSNF*EICISA
Trigger: AGCAGAAATACATATTTCCAAGAAGTTGGATGGGTG...CCTGCCCCCAAATAAGAAGGGATGGATTCCAACCCCAACTCCAGTAGCTTGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTGTCAGTCTGTGTGGCATTTGTTTaGTGTAATCAGAATAGTACC +
Preference number: 5 (lower is better)
Translates to: EHFPGNFALGARETWVSVCVAFV*CNQNST
Trigger: GGTACTATTCTGATTACACAAAACAAATGCCACACA...GACTGACACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGGCAATGGGGAATCTATaGGTAGGACCCCATGGTGGA +
Preference number: 5 (lower is better)
Translates to: QHSRVVLCALGPSFCACKAMGNL*VGPHGG
Trigger: TCCACCATGGGGTCCTACCAATAGATTCCCCATTGC...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGAGGCTCTTCCAAGCTTaGTCAGCACCACAACTTGGG +
Preference number: 5 (lower is better)
Translates to: QHSRVVLCALGPSFCACKRLFQA*SAPQLG
Trigger: CCCAAGTTGTGGTGCTGACAAAGCTTGGAAGAGCCT...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp CCTATCAGAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTTTGGGGTACATGATCTaGAAGGAACATGACTTATTC +
Preference number: 5 (lower is better)
Translates to: PIRALPWEFCPWGQRNMGLGYMI*KEHDLF
Trigger: GAATAAGTCATGTTCCTTCAAGATCATGTACCCCAA...ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGCTCTTGGGGTACATGATCTaGAAGGAACATGACTTATTC +
Preference number: 5 (lower is better)
Translates to: VQESWVTEGYHSVDLGVLLGYMI*KEHDLF
Trigger: GAATAAGTCATGTTCCTTCAAGATCATGTACCCCAA...GAGCACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GCAGTCCAGGAGAGTTGGGTTACGGAAGGCTATCACTCTGTAGACTTGGGAGTGTTGGGGTACATGATCTaGAAGGAACATGACTTATTC +
Preference number: 5 (lower is better)
Translates to: AVQESWVTEGYHSVDLGVLGYMI*KEHDLF
Trigger: GAATAAGTCATGTTCCTTCAAGATCATGTACCCCAA...CACTCCCAAGTCTACAGAGTGATAGCCTTCCGTAACCCAACTCTCCTGGACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS GCA 90 bp CTCTGTAGACACAAGGCTTTGGGATTCCCTTCAGAGAAGGAGCAATaGATCTCCATCACTCGTGTGGTAAGTAAAATTGCTGCTCAGAAC +
Preference number: 5 (lower is better)
Translates to: LCRHKALGFPSEKEQ*ISITRVVSKIAAQN
Trigger: GTTCTGAGCAGCAATTTTACTTACCACACGAGTGATGGAGATGCATTGCTCCTTCTCTGAAGGGAATCCCAAAGCCTTGTGTCTACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGAAGGCGGTAGTGAATTaGCACATGGCATTGTGGAGG +
Preference number: 5 (lower is better)
Translates to: QHSRVVLCALGPSFCACKKAVVN*HMALWR
Trigger: CCTCCACAATGCCATGTGCAAATTCACTACCGCCTT...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTTTGGGGTACATGATCTaGAAGGAACATGACTTATTC +
Preference number: 5 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPLGYMI*KEHDLF
Trigger: GAATAAGTCATGTTCCTTCAAGATCATGTACCCCAA...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp CCTATCAGAGCACTTCCCTGGGAATTTTGCCCTTGGGGCCAGAGAAACATGGGTAGCAGTTTTCTTTCTTaGTTCTTGGTCTCAGTGTTT +
Preference number: 5 (lower is better)
Translates to: PIRALPWEFCPWGQRNMGSSFLS*FLVSVF
Trigger: AAACACTGAGACCAAGAACAAAGAAAGAAAACTGCT...ACCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAGGGAAGTGCTCTGATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000541347.5
CDS-3UTR CAA 90 bp ATAACAGCACCTTCCAGGGATGGGCACCTGATACAAACTTGGCCTATCAGAGCAATCAGTTTAATGGCTTaGGCTTTCTTGTGGTTCTTG +
Preference number: 5 (lower is better)
Translates to: ITAPSRDGHLIQTWPIRAISLMA*AFLWFL
Trigger: CAAGAACCACAAGAAAGCCAAAGCCATTAAACTGAT...TGCTCTGATAGGCCAAGTTTGTATCAGGTGCCCATCCCTGGAAGGTGCTGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGCACTCTAGGGTTGTTTaGTGTGCATTGGGTCCATCA +
Preference number: 5 (lower is better)
Translates to: QHSRVVLCALGPSFCACKHSRVV*CALGPS
Trigger: TGATGGACCCAATGCACACAAAACAACCCTAGAGTG...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp TATCACTCTGTAGACTTGGGAGTGCTCACTGGGTGCCATCGTAAGAACCAGCCTTGTGTGGCATTTGTTTaGTGTAATCAGAATAGTACC +
Preference number: 5 (lower is better)
Translates to: YHSVDLGVLTGCHRKNQPCVAFV*CNQNST
Trigger: GGTACTATTCTGATTACACAAAACAAATGCCACACA...AGGCTGGTTCTTACGATGGCACCCAGTGAGCACTCCCAAGTCTACAGAGTGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GAGACCTGCAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATGATCTCTATAAACTGAAGCTTGATTaGTCCCAAGCTACTGGAGTT +
Preference number: 5 (lower is better)
Translates to: ETCKSWWLVPHAGKDDLYKLKLD*SQATGV
Trigger: AACTCCAGTAGCTTGGGACAAATCAAGCTTCAGTTT...ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGGGAAGCCAAGAAAATTaGTTTCCACATTGCGGAGCA +
Preference number: 5 (lower is better)
Translates to: QHSRVVLCALGPSFCACKGSQEN*FPHCGA
Trigger: TGCTCCGCAATGTGGAAACAAATTTTCTTGGCTTCC...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGATGGCTTTGGCTTTCTaGTGGTTCTTGCAGGAAAAC +
Preference number: 5 (lower is better)
Translates to: QHSRVVLCALGPSFCACKMALAF*WFLQEN
Trigger: GTTTTCCTGCAAGAACCACAAGAAAGCCAAAGCCAT...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp GAGACCTGCAAGAGTTGGTGGCTAGTTCCTCATGCTGGAAAGGATGATCTCTATATCAGTTTAATGGCTTaGGCTTTCTTGTGGTTCTTG +
Preference number: 5 (lower is better)
Translates to: ETCKSWWLVPHAGKDDLYISLMA*AFLWFL
Trigger: CAAGAACCACAAGAAAGCCAAAGCCATTAAACTGAT...ATAGAGATCATCCTTTCCAGCATGAGGAACTAGCCACCAACTCTTGCAGGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp TGTCATGTAAAGTCTGGGGGATCTATAATGACTAAAAGATTTGAGAGTCAGAGACTGGGAATTTTGCCCTaGGGGCCAGAGAAACATGGG +
Preference number: 5 (lower is better)
Translates to: CHVKSGGSIMTKRFESQRLGILP*GPEKHG
Trigger: CCCATGTTTCTCTGGCCCCAAGGGCAAAATTCCCAG...TCTCTGACTCTCAAATCTTTTAGTCATTATAGATCCCCCAGACTTTACATGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp TGTCATGTAAAGTCTGGGGGATCTATAATGACTAAAAGATTTGAGAGTCAGAGATTGGGCTTCTTGCTGTaGGTGAGGGCAAACACTACC +
Preference number: 5 (lower is better)
Translates to: CHVKSGGSIMTKRFESQRLGFLL*VRANTT
Trigger: GGTAGTGTTTGCCCTCACCAACAGCAAGAAGCCCAA...TCTCTGACTCTCAAATCTTTTAGTCATTATAGATCCCCCAGACTTTACATGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGAATTTGCACATGGCATaGTGGAGGCCCTTTTCATTT +
Preference number: 5 (lower is better)
Translates to: QHSRVVLCALGPSFCACKNLHMA*WRPFSF
Trigger: AAATGAAAAGGGCCTCCACAATGCCATGTGCAAATT...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGAAACTGAAGCTTGATTaGTCCCAAGCTACTGGAGTT +
Preference number: 5 (lower is better)
Translates to: QHSRVVLCALGPSFCACKKLKLD*SQATGV
Trigger: AACTCCAGTAGCTTGGGACAAATCAAGCTTCAGTTT...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp TGTCATGTAAAGTCTGGGGGATCTATAATGACTAAAAGATTTGAGAGTCAGAGAAGGCTCTTCCAAGCTTaGTCAGCACCACAACTTGGG +
Preference number: 5 (lower is better)
Translates to: CHVKSGGSIMTKRFESQRRLFQA*SAPQLG
Trigger: CCCAAGTTGTGGTGCTGACAAAGCTTGGAAGAGCCT...TCTCTGACTCTCAAATCTTTTAGTCATTATAGATCCCCCAGACTTTACATGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGATCAGTTTAATGGCTTaGGCTTTCTTGTGGTTCTTG +
Preference number: 5 (lower is better)
Translates to: QHSRVVLCALGPSFCACKISLMA*AFLWFL
Trigger: CAAGAACCACAAGAAAGCCAAAGCCATTAAACTGAT...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp TGTCATGTAAAGTCTGGGGGATCTATAATGACTAAAAGATTTGAGAGTCAGAGACACTCTAGGGTTGTTTaGTGTGCATTGGGTCCATCA +
Preference number: 5 (lower is better)
Translates to: CHVKSGGSIMTKRFESQRHSRVV*CALGPS
Trigger: TGATGGACCCAATGCACACAAAACAACCCTAGAGTG...TCTCTGACTCTCAAATCTTTTAGTCATTATAGATCCCCCAGACTTTACATGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp CAACACTCTAGGGTTGTTTTGTGTGCATTGGGTCCATCATTTTGTGCCTGTAAGTGTGTGGCATTTGTTTaGTGTAATCAGAATAGTACC +
Preference number: 5 (lower is better)
Translates to: QHSRVVLCALGPSFCACKCVAFV*CNQNST
Trigger: GGTACTATTCTGATTACACAAAACAAATGCCACACA...CTTACAGGCACAAAATGATGGACCCAATGCACACAAAACAACCCTAGAGTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp TGTCATGTAAAGTCTGGGGGATCTATAATGACTAAAAGATTTGAGAGTCAGAGATCCATCCCTTCTTATTaGGGGGCAGGGTTTTTCTAT +
Preference number: 5 (lower is better)
Translates to: CHVKSGGSIMTKRFESQRSIPSY*GAGFFY
Trigger: ATAGAAAAACCCTGCCCCCAAATAAGAAGGGATGGA...TCTCTGACTCTCAAATCTTTTAGTCATTATAGATCCCCCAGACTTTACATGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp TGTCATGTAAAGTCTGGGGGATCTATAATGACTAAAAGATTTGAGAGTCAGAGAAATTTGCACATGGCATaGTGGAGGCCCTTTTCATTT +
Preference number: 5 (lower is better)
Translates to: CHVKSGGSIMTKRFESQRNLHMA*WRPFSF
Trigger: AAATGAAAAGGGCCTCCACAATGCCATGTGCAAATT...TCTCTGACTCTCAAATCTTTTAGTCATTATAGATCCCCCAGACTTTACATGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS-3UTR CAA 90 bp TGTCATGTAAAGTCTGGGGGATCTATAATGACTAAAAGATTTGAGAGTCAGAGAAAACTGAAGCTTGATTaGTCCCAAGCTACTGGAGTT +
Preference number: 5 (lower is better)
Translates to: CHVKSGGSIMTKRFESQRKLKLD*SQATGV
Trigger: AACTCCAGTAGCTTGGGACAAATCAAGCTTCAGTTT...TCTCTGACTCTCAAATCTTTTAGTCATTATAGATCCCCCAGACTTTACATGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS GCA 72 bp GCTGCCCAGACGCCTAGGCTGATGGTGACGCCATGCTaGACGGTCCGGTTGTTCATGGAGTTGGCGGCCAGG +
Preference number: 6 (lower is better)
Translates to: AAQTPRLMVTPC*TVRLFMELAAR
Trigger: CCTGGCCGCCAACTCCATGAACAACCGGACCGTGCAGCATGGCGTCACCATCAGCCTAGGCGTCTGGGCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000435290.1
ENST00000541347.5
ENST00000542107.5
CDS GCA 72 bp GCTGCTGCCCAGACGCCTAGGCTGATGGTGACGCCATaGTGCACGGTCCGGTTGTTCATGGAGTTGGCGGCC +
Preference number: 6 (lower is better)
Translates to: AAAQTPRLMVTP*CTVRLFMELAA
Trigger: GGCCGCCAACTCCATGAACAACCGGACCGTGCAGCATGGCGTCACCATCAGCCTAGGCGTCTGGGCAGCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000435290.1
ENST00000541347.5
ENST00000542107.5
CDS GCA 72 bp CCCAACCCCAGGACAGAGCTGGGGGCTGCAGTGCAGTaGTGCGGGCTTGGTGGCCTGCTCATGGTGGAAGAA +
Preference number: 6 (lower is better)
Translates to: PNPRTELGAAVQ*CGLGGLLMVEE
Trigger: TTCTTCCACCATGAGCAGGCCACCAAGCCCGCAGCACTGCACTGCAGCCCCCAGCTCTGTCCTGGGGTTGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412814.1
ENST00000541347.5
CDS GCA 72 bp TGGGGGCTGCAGTGCAGTGCTGCGGGCTTGGTGGCCTaGTCATGGTGGAAGAAGTCCACCAGCAGTTTTCTT +
Preference number: 6 (lower is better)
Translates to: WGLQCSAAGLVA*SWWKKSTSSFL
Trigger: AAGAAAACTGCTGGTGGACTTCTTCCACCATGAGCAGGCCACCAAGCCCGCAGCACTGCACTGCAGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412814.1
ENST00000541347.5
CDS CCA 72 bp CTGCAGTGCAGTGCTGCGGGCTTGGTGGCCTGCTCATaGTGGAAGAAGTCCACCAGCAGTTTTCTTTCTTTG +
Preference number: 6 (lower is better)
Translates to: LQCSAAGLVACS*WKKSTSSFLSL
Trigger: CAAAGAAAGAAAACTGCTGGTGGACTTCTTCCACCATGAGCAGGCCACCAAGCCCGCAGCACTGCACTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412814.1
ENST00000541347.5
CDS CCA 72 bp CAGTGCAGTGCTGCGGGCTTGGTGGCCTGCTCATGGTaGAAGAAGTCCACCAGCAGTTTTCTTTCTTTGTTC +
Preference number: 6 (lower is better)
Translates to: QCSAAGLVACSW*KKSTSSFLSLF
Trigger: GAACAAAGAAAGAAAACTGCTGGTGGACTTCTTCCACCATGAGCAGGCCACCAAGCCCGCAGCACTGCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412814.1
ENST00000541347.5
CDS CAA 72 bp AGGGGGAGTAGGAAGCCAAGAAAATTTGTTTCCACATaGCGGAGCACGGGCCAGATTTCCTGGAGGACCTCG +
Preference number: 6 (lower is better)
Translates to: RGSRKPRKFVST*RSTGQISWRTS
Trigger: CGAGGTCCTCCAGGAAATCTGGCCCGTGCTCCGCAATGTGGAAACAAATTTTCTTGGCTTCCTACTCCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS TCA 72 bp TCGTACTCAAAGTTTTCTGTCACTGATTCAGGGAACTaGTCCATGGTGAAGGCCCCAACCTGGAGGTGGGGG +
Preference number: 6 (lower is better)
Translates to: SYSKFSVTDSGN*SMVKAPTWRWG
Trigger: CCCCCACCTCCAGGTTGGGGCCTTCACCATGGATCAGTTCCCTGAATCAGTGACAGAAAACTTTGAGTACGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435290.1
ENST00000542107.5
CDS GCA 72 bp CCCAGAAGCCAGAGAGCTCTTCCTGAAATCCAAGTCTaGCAACTTAAACGCCTCCAGGGGTTCTCTCATCCT +
Preference number: 6 (lower is better)
Translates to: PRSQRALPEIQV*QLKRLQGFSHP
Trigger: AGGATGAGAGAACCCCTGGAGGCGTTTAAGTTGGCAGACTTGGATTTCAGGAAGAGCTCTCTGGCTTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358309.3
CDS CCA 72 bp CTGCTCCTTTGTGATTCAGATGAGGAGAAATCAACGTaGACTGAGCGCCCACACAGGACAGCCAGGCATTTC +
Preference number: 6 (lower is better)
Translates to: LLLCDSDEEKST*TERPHRTARHF
Trigger: GAAATGCCTGGCTGTCCTGTGTGGGCGCTCAGTCCACGTTGATTTCTCCTCATCTGAATCACAAAGGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS CAA 90 bp GTGGCCTGCTCATGGTGGAAGAAGTCCACCAGCAGTTTTCTTTCTTaGTTCTTGGTCTCAGTGTTTGGCCACCTTTCCCTGCCTTTGGCC +
Preference number: 6 (lower is better)
Translates to: VACSWWKKSTSSFLS*FLVSVFGHLSLPLA
Trigger: GGCCAAAGGCAGGGAAAGGTGGCCAAACACTGAGACCAAGAACAAAGAAAGAAAACTGCTGGTGGACTTCTTCCACCATGAGCAGGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412814.1
ENST00000541347.5
CDS TCA 72 bp TCGTACTCAAAGTTTTCTGTCACTGATTCAGGGAACTaGTCCATGGTGAAGGCCTGGCGTGGACTGCCAAGG +
Preference number: 6 (lower is better)
Translates to: SYSKFSVTDSGN*SMVKAWRGLPR
Trigger: CCTTGGCAGTCCACGCCAGGCCTTCACCATGGATCAGTTCCCTGAATCAGTGACAGAAAACTTTGAGTACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399220.3
CDS GCA 72 bp TGCATAGATGAGAGGATTCAGGCAACAATGGCTAAATaGAACCGTCTCAGTCACACTGAGGGCCAGCCTCAG +
Preference number: 6 (lower is better)
Translates to: CIDERIQATMAK*NRLSHTEGQPQ
Trigger: CTGAGGCTGGCCCTCAGTGTGACTGAGACGGTTGCATTTAGCCATTGTTGCCTGAATCCTCTCATCTATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS CAA 72 bp CCAGCAGTTTTCTTTCTTTGTTCTTGGTCTCAGTGTTaGGCCACCTTTCCCTGCCTTTGGCCAGAAGGCCAC +
Preference number: 6 (lower is better)
Translates to: PAVFFLCSWSQC*ATFPCLWPEGH
Trigger: GTGGCCTTCTGGCCAAAGGCAGGGAAAGGTGGCCAAACACTGAGACCAAGAACAAAGAAAGAAAACTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412814.1
ENST00000541347.5
CDS TCA 72 bp TCGTACTCAAAGTTTTCTGTCACTGATTCAGGGAACTaGTCCATGGTGAAGGCCCCACTGGCCATTCTCCAC +
Preference number: 6 (lower is better)
Translates to: SYSKFSVTDSGN*SMVKAPLAILH
Trigger: GTGGAGAATGGCCAGTGGGGCCTTCACCATGGATCAGTTCCCTGAATCAGTGACAGAAAACTTTGAGTACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358309.3
CDS CAA 72 bp GTTCAGGAACTCCAGGTTCTCTGTAGACACAAGGCTTaGGGATTCCCTTCAGAGAAGGAGCAATGCATCTCC +
Preference number: 6 (lower is better)
Translates to: VQELQVLCRHKA*GFPSEKEQCIS
Trigger: GGAGATGCATTGCTCCTTCTCTGAAGGGAATCCCAAAGCCTTGTGTCTACAGAGAACCTGGAGTTCCTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5
CDS TCA 72 bp CTCAGCCAAATCATCGTACTCAAAGTTTTCTGTCACTaGTTCAGGGAACTGATCCATGGTGAAGGCCTGGCG +
Preference number: 6 (lower is better)
Translates to: LSQIIVLKVFCH*FRELIHGEGLA
Trigger: CGCCAGGCCTTCACCATGGATCAGTTCCCTGAATCAGTGACAGAAAACTTTGAGTACGATGATTTGGCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399220.3
CDS TCA 72 bp CTCAGCCAAATCATCGTACTCAAAGTTTTCTGTCACTaGTTCAGGGAACTGATCCATGGTGAAGGCCCCACT +
Preference number: 6 (lower is better)
Translates to: LSQIIVLKVFCH*FRELIHGEGPT
Trigger: AGTGGGGCCTTCACCATGGATCAGTTCCCTGAATCAGTGACAGAAAACTTTGAGTACGATGATTTGGCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358309.3
CDS TCA 72 bp TCGTACTCAAAGTTTTCTGTCACTGATTCAGGGAACTaGTCCATGGTGAAGGCCTCTAGTCGCTGTGGTGTT +
Preference number: 6 (lower is better)
Translates to: SYSKFSVTDSGN*SMVKASSRCGV
Trigger: AACACCACAGCGACTAGAGGCCTTCACCATGGATCAGTTCCCTGAATCAGTGACAGAAAACTTTGAGTACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412814.1
ENST00000541347.5
CDS TCA 72 bp CTCAGCCAAATCATCGTACTCAAAGTTTTCTGTCACTaGTTCAGGGAACTGATCCATGGTGAAGGCCCCAAC +
Preference number: 6 (lower is better)
Translates to: LSQIIVLKVFCH*FRELIHGEGPN
Trigger: GTTGGGGCCTTCACCATGGATCAGTTCCCTGAATCAGTGACAGAAAACTTTGAGTACGATGATTTGGCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000435290.1
ENST00000542107.5
CDS CAA 90 bp AAGAGGAAAAACACGATGACCACCAGAAGGATCAGTTTAATGGCTTaGGCTTTCTTGTGGTTCTTGCAGGAAAACAGCGTCTGGATGATT +
Preference number: 6 (lower is better)
Translates to: KRKNTMTTRRISLMA*AFLWFLQENSVWMI
Trigger: AATCATCCAGACGCTGTTTTCCTGCAAGAACCACAAGAAAGCCAAAGCCATTAAACTGATCCTTCTGGTGGTCATCGTGTTTTTCCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358309.3
ENST00000399220.3
ENST00000541347.5
ENST00000542107.5