RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CX3CL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000006210

Ensembl transcript IDs: ENST00000006053.7, ENST00000563383.1, ENST00000564948.1, ENST00000565912.1

Found 687 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGGGCTCCAGGACCACAGACTCGTCCATTCCCCCGGCGGCAGGGGTaGTCCTGGGCTTCACCTCGCCGATCTGCTTCTCGAAGGTGCCGC +
Preference number: 1 (lower is better)
Translates to: RAPGPQTRPFPRRQG*SWASPRRSASRRCR
Trigger: GCGGCACCTTCGAGAAGCAGATCGGCGAGGTGAAGCCCAGGACCACCCCTGCCGCCGGGGGAATGGACGAGTCTGTGGTCCTGGAGCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564948.1
3UTR CCA 90 bp TGGGCCCAGGTTGGTGGGGAGCAGAACTCTGCCACGTGGCGGCAGTaGAGACGGGAGGCACTCGGAAAAGCTCCGTGCCCACAGGCCCTC +
Preference number: 1 (lower is better)
Translates to: WAQVGGEQNSATWRQ*RREALGKAPCPQAL
Trigger: GAGGGCCTGTGGGCACGGAGCTTTTCCGAGTGCCTCCCGTCTCCACTGCCGCCACGTGGCAGAGTTCTGCTCCCCACCAACCTGGGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564948.1
3UTR CCA 90 bp CCCAGAGGCTGGGCCCAGGTTGGTGGGGAGCAGAACTCTGCCACGTaGCGGCAGTGGAGACGGGAGGCACTCGGAAAAGCTCCGTGCCCA +
Preference number: 1 (lower is better)
Translates to: PRGWAQVGGEQNSAT*RQWRREALGKAPCP
Trigger: TGGGCACGGAGCTTTTCCGAGTGCCTCCCGTCTCCACTGCCGCCACGTGGCAGAGTTCTGCTCCCCACCAACCTGGGCCCAGCCTCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564948.1
3UTR CCA 90 bp CCAGGACCACAGACTCGTCCATTCCCCCGGCGGCAGGGGTGGTCCTaGGCTTCACCTCGCCGATCTGCTTCTCGAAGGTGCCGCCATTTC +
Preference number: 1 (lower is better)
Translates to: PGPQTRPFPRRQGWS*ASPRRSASRRCRHF
Trigger: GAAATGGCGGCACCTTCGAGAAGCAGATCGGCGAGGTGAAGCCCAGGACCACCCCTGCCGCCGGGGGAATGGACGAGTCTGTGGTCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564948.1
3UTR GCA 90 bp GGGCTGGGGGAGATAGCACCGCAGGTGGCCGGGGTGACTGGCAACTaGAGCAGGACCAAGAGACACAATCAGGTTGCAGGGAGTGGGCAG +
Preference number: 1 (lower is better)
Translates to: GLGEIAPQVAGVTGN*SRTKRHNQVAGSGQ
Trigger: CTGCCCACTCCCTGCAACCTGATTGTGTCTCTTGGTCCTGCTGCAGTTGCCAGTCACCCCGGCCACCTGCGGTGCTATCTCCCCCAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR CCA 90 bp CCCCCTCTGTCCCTGGCAGGTGGAGAATGGTCAAGGCTGGCCTCCTaGGGAATGCCTGGGAGCTTGGAGCTTGTGCACCTGGAGGATCCC +
Preference number: 1 (lower is better)
Translates to: PPLSLAGGEWSRLAS*GMPGSLELVHLEDP
Trigger: GGGATCCTCCAGGTGCACAAGCTCCAAGCTCCCAGGCATTCCCCAGGAGGCCAGCCTTGACCATTCTCCACCTGCCAGGGACAGAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR CCA 90 bp CTTCCTGGGAAGAAGGAGTCGGCTCCAGGCTACTGCTTTCGCCTGTaGCTTCGGGCTCCAGGACCACAGACTCGTCCATTCCCCCGGCGG +
Preference number: 1 (lower is better)
Translates to: LPGKKESAPGYCFRL*LRAPGPQTRPFPRR
Trigger: CCGCCGGGGGAATGGACGAGTCTGTGGTCCTGGAGCCCGAAGCCACAGGCGAAAGCAGTAGCCTGGAGCCGACTCCTTCTTCCCAGGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564948.1
3UTR GCA 90 bp GGGCCCTCTGTGCTTCCTGGGAAGAAGGAGTCGGCTCCAGGCTACTaGTTTCGCCTGTGGCTTCGGGCTCCAGGACCACAGACTCGTCCA +
Preference number: 1 (lower is better)
Translates to: GPSVLPGKKESAPGY*FRLWLRAPGPQTRP
Trigger: TGGACGAGTCTGTGGTCCTGGAGCCCGAAGCCACAGGCGAAAGCAGTAGCCTGGAGCCGACTCCTTCTTCCCAGGAAGCACAGAGGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564948.1
3UTR CCA 90 bp AGAGGTGGGAAGGGAGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTaGGGTGGGACCACAAGGGTCTTGTGGCCTGGCTGCCTGCAGGAG +
Preference number: 1 (lower is better)
Translates to: RGGKGAQPQERIWRV*GGTTRVLWPGCLQE
Trigger: CTCCTGCAGGCAGCCAGGCCACAAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCTCCCTTCCCACCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR CCA 90 bp CTGAATATGCTGCGCCACACCCAGCAGGGGAGTGCAGAGGCCAGGTaGGCAGGGCAGCACAGCGTCTTGCTCTCTATGGACCAGAGCTGG +
Preference number: 1 (lower is better)
Translates to: LNMLRHTQQGSAEAR*AGQHSVLLSMDQSW
Trigger: CCAGCTCTGGTCCATAGAGAGCAAGACGCTGTGCTGCCCTGCCCACCTGGCCTCTGCACTCCCCTGCTGGGTGTGGCGCAGCATATTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR GCA 90 bp TCTGCTCTGCCCATTTCCATTTGGGGGCCCACAGGGCAGGGTCTGTaGTATCAACTCACTCCCTTGCAGGCCCTCTGGGCCTCAGGGTCC +
Preference number: 1 (lower is better)
Translates to: SALPISIWGPTGQGL*YQLTPLQALWASGS
Trigger: GGACCCTGAGGCCCAGAGGGCCTGCAAGGGAGTGAGTTGATAGCACAGACCCTGCCCTGTGGGCCCCCAAATGGAAATGGGCAGAGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR CCA 90 bp TGGGAAGGGAGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTaGGACCACAAGGGTCTTGTGGCCTGGCTGCCTGCAGGAGTCTCT +
Preference number: 1 (lower is better)
Translates to: WEGSPASGKNLACVG*DHKGLVAWLPAGVS
Trigger: AGAGACTCCTGCAGGCAGCCAGGCCACAAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCTCCCTTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR CCA 90 bp CTAAGGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTaGAGAGAAGGGCCTCAGGTCAATGAGTGTTGTCAGGGGGACAGG +
Preference number: 1 (lower is better)
Translates to: LRCSAGKDCEAASRG*REGPQVNECCQGDR
Trigger: CCTGTCCCCCTGACAACACTCATTGACCTGAGGCCCTTCTCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACCTTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR CCA 90 bp ACAGGGCAGGGTCTGTGCTATCAACTCACTCCCTTGCAGGCCCTCTaGGCCTCAGGGTCCAAAGACAAGTTAGTCCATTGGCAGGGACTG +
Preference number: 1 (lower is better)
Translates to: TGQGLCYQLTPLQAL*ASGSKDKLVHWQGL
Trigger: CAGTCCCTGCCAATGGACTAACTTGTCTTTGGACCCTGAGGCCCAGAGGGCCTGCAAGGGAGTGAGTTGATAGCACAGACCCTGCCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR CCA 90 bp TCTCTGAAGAAGCATCAGGAATGTGGCTGCTCCTGGAGCCTTTCCTaGGCTTCTTGGACATGTGTCTGGAGCCCTCCCTCCCTCTTAGCG +
Preference number: 1 (lower is better)
Translates to: SLKKHQECGCSWSLS*ASWTCVWSPPSLLA
Trigger: CGCTAAGAGGGAGGGAGGGCTCCAGACACATGTCCAAGAAGCCCAGGAAAGGCTCCAGGAGCAGCCACATTCCTGATGCTTCTTCAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR CCA 90 bp CAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTaGCCTGGCTGCCTGCAGGAGTCTCTGAAGAAGCATCAGGAATGT +
Preference number: 1 (lower is better)
Translates to: QERIWRVWGGTTRVL*PGCLQESLKKHQEC
Trigger: ACATTCCTGATGCTTCTTCAGAGACTCCTGCAGGCAGCCAGGCCACAAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR CCA 90 bp AGGTGGGCAGGGCAGCACAGCGTCTTGCTCTCTATGGACCAGAGCTaGGTTTCCTTCCTCCAAGCACCCATCTGTGAAGGAGTGTTCCTA +
Preference number: 1 (lower is better)
Translates to: RWAGQHSVLLSMDQS*VSFLQAPICEGVFL
Trigger: TAGGAACACTCCTTCACAGATGGGTGCTTGGAGGAAGGAAACCCAGCTCTGGTCCATAGAGAGCAAGACGCTGTGCTGCCCTGCCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR GCA 90 bp AGAGCCTCACTGGAAGCAGTGCCAGGAAACACCACACTAGCCTCATaGAAGAAAAGACATGTCACCAGTGGGGGCGTGGGCTCTGTACAG +
Preference number: 1 (lower is better)
Translates to: RASLEAVPGNTTLAS*KKRHVTSGGVGSVQ
Trigger: CTGTACAGAGCCCACGCCCCCACTGGTGACATGTCTTTTCTTGCATGAGGCTAGTGTGGTGTTTCCTGGCACTGCTTCCAGTGAGGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR GCA 90 bp CCAAAGAGGAAAGTCACCAGATACCCTTATCTCCCCTTCCCACAATaGCTAACCAAGGGCAGAGCCTCACTGGAAGCAGTGCCAGGAAAC +
Preference number: 1 (lower is better)
Translates to: PKRKVTRYPYLPFPQ*LTKGRASLEAVPGN
Trigger: GTTTCCTGGCACTGCTTCCAGTGAGGCTCTGCCCTTGGTTAGGCATTGTGGGAAGGGGAGATAAGGGTATCTGGTGACTTTCCTCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR GCA 90 bp TCCTACTCTTTCCAAAGTCTTCCTAGATCATCCTTGTCCATGTCCTaGTTGGAGAAACTAACAAAGTCCATGGAAGGGGGACCAACTGGC +
Preference number: 1 (lower is better)
Translates to: SYSFQSLPRSSLSMS*LEKLTKSMEGGPTG
Trigger: GCCAGTTGGTCCCCCTTCCATGGACTTTGTTAGTTTCTCCAAGCAGGACATGGACAAGGATGATCTAGGAAGACTTTGGAAAGAGTAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR TCA 90 bp AGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACCAGGGACCCCCGGGCTGTCTCAGTaGCTAAGCCTGGGCGGGGCC +
Preference number: 2 (lower is better)
Translates to: RRQGSGTIQGRGELPPGTPGLSQ*LSLGGA
Trigger: GGCCCCGCCCAGGCTTAGTCACTGAGACAGCCCGGG...GGTCCCTGGTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR TCA 90 bp AGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACCAGGGACCCGCAGGTGGCCGGGGTaGCTGGCAACTGCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: RRQGSGTIQGRGELPPGTRRWPG*LATAAG
Trigger: TCCTGCTGCAGTTGCCAGTCACCCCGGCCACCTGCG...GGTCCCTGGTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR GCA 90 bp GTGGCTTCGGGCTCCAGGACCACAGACTCGTCCATTCCCCCGGCGGCAGGGGTGTTCACCTCGCCGATCTaGTTCTCGAAGGTGCCGCCA +
Preference number: 2 (lower is better)
Translates to: VASGSRTTDSSIPPAAGVFTSPI*FSKVPP
Trigger: TGGCGGCACCTTCGAGAAGCAGATCGGCGAGGTGAA...CACCCCTGCCGCCGGGGGAATGGACGAGTCTGTGGTCCTGGAGCCCGAAGCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564948.1
3UTR-3UTR CCA 90 bp GCCAGGCCAGCCGGTGCAGCCCCATCCAGGCATGCTCGAGCCTTCAGCAGCCAATCAAGGCTGGCCTCCTaGGGAATGCCTGGGAGCTTG +
Preference number: 2 (lower is better)
Translates to: ARPAGAAPSRHARAFSSQSRLAS*GMPGSL
Trigger: CAAGCTCCCAGGCATTCCCCAGGAGGCCAGCCTTGA...TTGGCTGCTGAAGGCTCGAGCATGCCTGGATGGGGCTGCACCGGCTGGCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR TCA 90 bp AGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTCCCGGGCTGTCTCAGTaGCTAAGCCTGGGCGGGGCC +
Preference number: 2 (lower is better)
Translates to: SPASGKNLACVGWDHKGLPGLSQ*LSLGGA
Trigger: GGCCCCGCCCAGGCTTAGTCACTGAGACAGCCCGGG...AAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp CCATGGAAGGGGGACCAACTGGCCCCAGCGGCTTCCTCACAAAGGAGGCAGGGCTCAAGGCTGGCCTCCTaGGGAATGCCTGGGAGCTTG +
Preference number: 2 (lower is better)
Translates to: PWKGDQLAPAASSQRRQGSRLAS*GMPGSL
Trigger: CAAGCTCCCAGGCATTCCCCAGGAGGCCAGCCTTGA...GCCCTGCCTCCTTTGTGAGGAAGCCGCTGGGGCCAGTTGGTCCCCCTTCCATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp CCATGGAAGGGGGACCAACTGGCCCCAGCGGCTTCCTCACAAAGGAGGCAGGGCACTCACAGGGCAGCATaGGTCAGAAGGGGCTGGGCA +
Preference number: 2 (lower is better)
Translates to: PWKGDQLAPAASSQRRQGTHRAA*VRRGWA
Trigger: TGCCCAGCCCCTTCTGACCCATGCTGCCCTGTGAGT...GCCCTGCCTCCTTTGTGAGGAAGCCGCTGGGGCCAGTTGGTCCCCCTTCCATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp AGAACTCTGCCACGTGGCGGCAGTGGAGACGGGAGGCACTCGGAAAAGCTCCGTCGGCAGGGGTGGTCCTaGGCTTCACCTCGCCGATCT +
Preference number: 2 (lower is better)
Translates to: RTLPRGGSGDGRHSEKLRRQGWS*ASPRRS
Trigger: AGATCGGCGAGGTGAAGCCCAGGACCACCCCTGCCG...ACGGAGCTTTTCCGAGTGCCTCCCGTCTCCACTGCCGCCACGTGGCAGAGTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564948.1
3UTR-3UTR CCA 90 bp TTGGTGGGGAGCAGAACTCTGCCACGTGGCGGCAGTGGAGACGGGAGGCACTCGGCCCTCTGTGCTTCCTaGGAAGAAGGAGTCGGCTCC +
Preference number: 2 (lower is better)
Translates to: LVGSRTLPRGGSGDGRHSALCAS*EEGVGS
Trigger: GGAGCCGACTCCTTCTTCCCAGGAAGCACAGAGGGC...CGAGTGCCTCCCGTCTCCACTGCCGCCACGTGGCAGAGTTCTGCTCCCCACCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564948.1
3UTR-3UTR TCA 90 bp CCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGCTCCCTCTTAGCGGGTaGTGGGAGGCAGAGCCCGGG +
Preference number: 2 (lower is better)
Translates to: PASGKNLACVGWDHKGLVLPLSG*WEAEPG
Trigger: CCCGGGCTCTGCCTCCCATCACCCGCTAAGAGGGAG...CACAAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR GCA 90 bp TGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGGCCTGGCTGCCTGCAGGAGGAGACACAATCAGGTTaGAGGGAGTGGGCAGAGGGC +
Preference number: 2 (lower is better)
Translates to: WRVWGGTTRVLWPGCLQEETQSG*REWAEG
Trigger: GCCCTCTGCCCACTCCCTGCAACCTGATTGTGTCTC...CTCCTGCAGGCAGCCAGGCCACAAGACCCTTGTGGTCCCACCCCACACACGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR GCA 90 bp CCATGGAAGGGGGACCAACTGGCCCCAGCGGCTTCCTCACAAAGGAGGCAGGGCCTCCCCTTCCCACAATaGCTAACCAAGGGCAGAGCC +
Preference number: 2 (lower is better)
Translates to: PWKGDQLAPAASSQRRQGLPFPQ*LTKGRA
Trigger: GGCTCTGCCCTTGGTTAGGCATTGTGGGAAGGGGAG...GCCCTGCCTCCTTTGTGAGGAAGCCGCTGGGGCCAGTTGGTCCCCCTTCCATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR GCA 90 bp GCCAGGCCAGCCGGTGCAGCCCCATCCAGGCATGCTCGAGCCTTCAGCAGCCAAATCCCTGGTCCTGTCTaGGGTGGGGACAAAGGTGAA +
Preference number: 2 (lower is better)
Translates to: ARPAGAAPSRHARAFSSQIPGPV*GGDKGE
Trigger: TTCACCTTTGTCCCCACCGCAGACAGGACCAGGGAT...TTGGCTGCTGAAGGCTCGAGCATGCCTGGATGGGGCTGCACCGGCTGGCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp TGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGGCCTGGCTGCCTGCAGGAGGAATGCCTGGGAGCTTaGAGCTTGTGCACCTGGAGG +
Preference number: 2 (lower is better)
Translates to: WRVWGGTTRVLWPGCLQEECLGA*SLCTWR
Trigger: CCTCCAGGTGCACAAGCTCCAAGCTCCCAGGCATTC...CTCCTGCAGGCAGCCAGGCCACAAGACCCTTGTGGTCCCACCCCACACACGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp CCATGGAAGGGGGACCAACTGGCCCCAGCGGCTTCCTCACAAAGGAGGCAGGGCGAATGCCTGGGAGCTTaGAGCTTGTGCACCTGGAGG +
Preference number: 2 (lower is better)
Translates to: PWKGDQLAPAASSQRRQGECLGA*SLCTWR
Trigger: CCTCCAGGTGCACAAGCTCCAAGCTCCCAGGCATTC...GCCCTGCCTCCTTTGTGAGGAAGCCGCTGGGGCCAGTTGGTCCCCCTTCCATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp TGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGGCCTGGCTGCCTGCAGGAGCTCCTGGGGAATGCCTaGGAGCTTGGAGCTTGTGCA +
Preference number: 2 (lower is better)
Translates to: WRVWGGTTRVLWPGCLQELLGNA*ELGACA
Trigger: TGCACAAGCTCCAAGCTCCCAGGCATTCCCCAGGAG...CTCCTGCAGGCAGCCAGGCCACAAGACCCTTGTGGTCCCACCCCACACACGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR TCA 90 bp AGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACCAGGGACCCGGTGGGGACAAAGGTaGAGGAGAAGGTCTTGGAGG +
Preference number: 2 (lower is better)
Translates to: RRQGSGTIQGRGELPPGTRWGQR*RRRSWR
Trigger: CCTCCAAGACCTTCTCCTTCACCTTTGTCCCCACCG...GGTCCCTGGTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR GCA 90 bp GGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGAGAAGGGCTGGCCTCCTGGGGAATaGCTGGGAGCTTGGAGCTTG +
Preference number: 2 (lower is better)
Translates to: GALLVRTVRLHPGAGEKGWPPGE*LGAWSL
Trigger: CAAGCTCCAAGCTCCCAGGCATTCCCCAGGAGGCCA...GCCCTTCTCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR GCA 90 bp AGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACCAGGGACCCTCCCCTTCCCACAATaGCTAACCAAGGGCAGAGCC +
Preference number: 2 (lower is better)
Translates to: RRQGSGTIQGRGELPPGTLPFPQ*LTKGRA
Trigger: GGCTCTGCCCTTGGTTAGGCATTGTGGGAAGGGGAG...GGTCCCTGGTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR GCA 90 bp CAGGCCCTGAGCTTCCTGAATATGCTGCGCCACACCCAGCAGGGGAGTGCAGAGAGCCCCATCCAGGCATaGTCGAGCCTTCAGCAGCCA +
Preference number: 2 (lower is better)
Translates to: QALSFLNMLRHTQQGSAESPIQA*SSLQQP
Trigger: TGGCTGCTGAAGGCTCGAGCATGCCTGGATGGGGCT...CTCTGCACTCCCCTGCTGGGTGTGGCGCAGCATATTCAGGAAGCTCAGGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp CCTCAGGTAGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACCTGGCAGGTGGAGAATaGTCAAGGCTGGCCTCCTGG +
Preference number: 2 (lower is better)
Translates to: PQVDGKGRGQSKGEVSCHLAGGE*SRLASW
Trigger: CCAGGAGGCCAGCCTTGACCATTCTCCACCTGCCAG...GTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCTACCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp GGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGAGAAGGGCTCACCAGTGGGGGCGTaGGCTCTGTACAGAGGATGG +
Preference number: 2 (lower is better)
Translates to: GALLVRTVRLHPGAGEKGSPVGA*ALYRGW
Trigger: CCATCCTCTGTACAGAGCCCACGCCCCCACTGGTGA...GCCCTTCTCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR TCA 90 bp CCTCAGGTAGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACAGGGCCTCAGGTCAATaGGTGTTGTCAGGGGGACAG +
Preference number: 2 (lower is better)
Translates to: PQVDGKGRGQSKGEVSCHRASGQ*VLSGGQ
Trigger: CTGTCCCCCTGACAACACTCATTGACCTGAGGCCCT...GTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCTACCTGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR GCA 90 bp CCTCAGGTAGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACGGAGCTTGGAGCTTGTaGACCTGGAGGATCCCACCT +
Preference number: 2 (lower is better)
Translates to: PQVDGKGRGQSKGEVSCHGAWSL*TWRIPP
Trigger: AGGTGGGATCCTCCAGGTGCACAAGCTCCAAGCTCC...GTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCTACCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR GCA 90 bp AGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACCAGGGACCATCCCTGGTCCTGTCTaGGGTGGGGACAAAGGTGAA +
Preference number: 2 (lower is better)
Translates to: RRQGSGTIQGRGELPPGTIPGPV*GGDKGE
Trigger: TTCACCTTTGTCCCCACCGCAGACAGGACCAGGGAT...GGTCCCTGGTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp TGTGTGAGATGGGAGGACTGTAGTACTCACAGGGCAGCATGGGTCAGAAGGGGCCTCAGGCCAGGCCCTTaGGTGGGGGTGGGTATGAGG +
Preference number: 2 (lower is better)
Translates to: CVRWEDCSTHRAAWVRRGLRPGP*VGVGMR
Trigger: CCTCATACCCACCCCCACCCAAGGGCCTGGCCTGAG...GCCCCTTCTGACCCATGCTGCCCTGTGAGTACTACAGTCCTCCCATCTCACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp TTGCAGGCCCTCTGGGCCTCAGGGTCCAAAGACAAGTTAGTCCATTGGCAGGGACTCAGGCCAGGCCCTTaGGTGGGGGTGGGTATGAGG +
Preference number: 2 (lower is better)
Translates to: LQALWASGSKDKLVHWQGLRPGP*VGVGMR
Trigger: CCTCATACCCACCCCCACCCAAGGGCCTGGCCTGAG...TCCCTGCCAATGGACTAACTTGTCTTTGGACCCTGAGGCCCAGAGGGCCTGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp CAGGCCCTGAGCTTCCTGAATATGCTGCGCCACACCCAGCAGGGGAGTGCAGAGCTCCTGGGGAATGCCTaGGAGCTTGGAGCTTGTGCA +
Preference number: 2 (lower is better)
Translates to: QALSFLNMLRHTQQGSAELLGNA*ELGACA
Trigger: TGCACAAGCTCCAAGCTCCCAGGCATTCCCCAGGAG...CTCTGCACTCCCCTGCTGGGTGTGGCGCAGCATATTCAGGAAGCTCAGGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp ACCCAGCCCATAAGAGGCCCCTCAGGTAGACGGCAAGGGTCGGGGACAATCCAATCAAGGCTGGCCTCCTaGGGAATGCCTGGGAGCTTG +
Preference number: 2 (lower is better)
Translates to: TQPIRGPSGRRQGSGTIQSRLAS*GMPGSL
Trigger: CAAGCTCCCAGGCATTCCCCAGGAGGCCAGCCTTGA...TTGGATTGTCCCCGACCCTTGCCGTCTACCTGAGGGGCCTCTTATGGGCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp ACCCAGCCCATAAGAGGCCCCTCAGGTAGACGGCAAGGGTCGGGGACAATCCAAACTCACAGGGCAGCATaGGTCAGAAGGGGCTGGGCA +
Preference number: 2 (lower is better)
Translates to: TQPIRGPSGRRQGSGTIQTHRAA*VRRGWA
Trigger: TGCCCAGCCCCTTCTGACCCATGCTGCCCTGTGAGT...TTGGATTGTCCCCGACCCTTGCCGTCTACCTGAGGGGCCTCTTATGGGCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp ACCCAGCCCATAAGAGGCCCCTCAGGTAGACGGCAAGGGTCGGGGACAATCCAATCACCAGTGGGGGCGTaGGCTCTGTACAGAGGATGG +
Preference number: 2 (lower is better)
Translates to: TQPIRGPSGRRQGSGTIQSPVGA*ALYRGW
Trigger: CCATCCTCTGTACAGAGCCCACGCCCCCACTGGTGA...TTGGATTGTCCCCGACCCTTGCCGTCTACCTGAGGGGCCTCTTATGGGCTGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp AGGGAGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGCGGGGCCTTCAGGGATaGTCTCTGCTCTGCCCATTT +
Preference number: 2 (lower is better)
Translates to: REPSLRKESGVCGVGPQGRGLQG*SLLCPF
Trigger: AAATGGGCAGAGCAGAGACCATCCCTGAAGGCCCCG...CCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp CAGGCCCTGAGCTTCCTGAATATGCTGCGCCACACCCAGCAGGGGAGTGCAGAGAAGGGTCTTGTGGCCTaGCTGCCTGCAGGAGTCTCT +
Preference number: 2 (lower is better)
Translates to: QALSFLNMLRHTQQGSAEKGLVA*LPAGVS
Trigger: AGAGACTCCTGCAGGCAGCCAGGCCACAAGACCCTT...CTCTGCACTCCCCTGCTGGGTGTGGCGCAGCATATTCAGGAAGCTCAGGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp CAGGCCCTGAGCTTCCTGAATATGCTGCGCCACACCCAGCAGGGGAGTGCAGAGAGAATCTGGCGTGTGTaGGGTGGGACCACAAGGGTC +
Preference number: 2 (lower is better)
Translates to: QALSFLNMLRHTQQGSAERIWRV*GGTTRV
Trigger: GACCCTTGTGGTCCCACCCCACACACGCCAGATTCT...CTCTGCACTCCCCTGCTGGGTGTGGCGCAGCATATTCAGGAAGCTCAGGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR GCA 90 bp AGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTTGGCCTCCTGGGGAATaGCTGGGAGCTTGGAGCTTG +
Preference number: 2 (lower is better)
Translates to: SPASGKNLACVGWDHKGLWPPGE*LGAWSL
Trigger: CAAGCTCCAAGCTCCCAGGCATTCCCCAGGAGGCCA...AAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR GCA 90 bp CAGGCCCTGAGCTTCCTGAATATGCTGCGCCACACCCAGCAGGGGAGTGCAGAGCATCAGGAATGTGGCTaGTCCTGGAGCCTTTCCTGG +
Preference number: 2 (lower is better)
Translates to: QALSFLNMLRHTQQGSAEHQECG*SWSLSW
Trigger: CCAGGAAAGGCTCCAGGAGCAGCCACATTCCTGATG...CTCTGCACTCCCCTGCTGGGTGTGGCGCAGCATATTCAGGAAGCTCAGGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR GCA 90 bp CAGGCCCTGAGCTTCCTGAATATGCTGCGCCACACCCAGCAGGGGAGTGCAGAGGGCAGCACAGCGTCTTaGTCTCTATGGACCAGAGCT +
Preference number: 2 (lower is better)
Translates to: QALSFLNMLRHTQQGSAEGSTAS*SLWTRA
Trigger: AGCTCTGGTCCATAGAGAGCAAGACGCTGTGCTGCC...CTCTGCACTCCCCTGCTGGGTGTGGCGCAGCATATTCAGGAAGCTCAGGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp AGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACCAGGGACCTCATTGGGGCTGGGATaGCGTCAAAGGGAACCTCTA +
Preference number: 2 (lower is better)
Translates to: RRQGSGTIQGRGELPPGTSLGLG*RQREPL
Trigger: TAGAGGTTCCCTTTGACGCCATCCCAGCCCCAATGA...GGTCCCTGGTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp AGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTTCACCAGTGGGGGCGTaGGCTCTGTACAGAGGATGG +
Preference number: 2 (lower is better)
Translates to: SPASGKNLACVGWDHKGLSPVGA*ALYRGW
Trigger: CCATCCTCTGTACAGAGCCCACGCCCCCACTGGTGA...AAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp CAGGCCCTGAGCTTCCTGAATATGCTGCGCCACACCCAGCAGGGGAGTGCAGAGCATCATGGAAATCCCTaGTCCTGTCTGCGGTGGGGA +
Preference number: 2 (lower is better)
Translates to: QALSFLNMLRHTQQGSAEHHGNP*SCLRWG
Trigger: TCCCCACCGCAGACAGGACCAGGGATTTCCATGATG...CTCTGCACTCCCCTGCTGGGTGTGGCGCAGCATATTCAGGAAGCTCAGGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR TCA 90 bp TGGAAAACATCATGGAAATCCCTGGTCCTGTCTGCGGTGGGGACAAAGGTGAAGCTCCCTCTTAGCGGGTaGTGGGAGGCAGAGCCCGGG +
Preference number: 2 (lower is better)
Translates to: WKTSWKSLVLSAVGTKVKLPLSG*WEAEPG
Trigger: CCCGGGCTCTGCCTCCCATCACCCGCTAAGAGGGAG...CTTCACCTTTGTCCCCACCGCAGACAGGACCAGGGATTTCCATGATGTTTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR GCA 90 bp CCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGCTCCCCTTCCCACAATaGCTAACCAAGGGCAGAGCC +
Preference number: 2 (lower is better)
Translates to: PASGKNLACVGWDHKGLVLPFPQ*LTKGRA
Trigger: GGCTCTGCCCTTGGTTAGGCATTGTGGGAAGGGGAG...CACAAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR GCA 90 bp CCTCAGGTAGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACACAGGGCAGGGTCTGTaGTATCAACTCACTCCCTTG +
Preference number: 2 (lower is better)
Translates to: PQVDGKGRGQSKGEVSCHTGQGL*YQLTPL
Trigger: CAAGGGAGTGAGTTGATAGCACAGACCCTGCCCTGT...GTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCTACCTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR GCA 90 bp ACCCAGCCCATAAGAGGCCCCTCAGGTAGACGGCAAGGGTCGGGGACAATCCAAATCCCTGGTCCTGTCTaGGGTGGGGACAAAGGTGAA +
Preference number: 2 (lower is better)
Translates to: TQPIRGPSGRRQGSGTIQIPGPV*GGDKGE
Trigger: TTCACCTTTGTCCCCACCGCAGACAGGACCAGGGAT...TTGGATTGTCCCCGACCCTTGCCGTCTACCTGAGGGGCCTCTTATGGGCTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp AGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTCTCCTGGGGAATGCCTaGGAGCTTGGAGCTTGTGCA +
Preference number: 2 (lower is better)
Translates to: SPASGKNLACVGWDHKGLLLGNA*ELGACA
Trigger: TGCACAAGCTCCAAGCTCCCAGGCATTCCCCAGGAG...AAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp TTGCAGGCCCTCTGGGCCTCAGGGTCCAAAGACAAGTTAGTCCATTGGCAGGGACTGGCAGGTGGAGAATaGTCAAGGCTGGCCTCCTGG +
Preference number: 2 (lower is better)
Translates to: LQALWASGSKDKLVHWQGLAGGE*SRLASW
Trigger: CCAGGAGGCCAGCCTTGACCATTCTCCACCTGCCAG...TCCCTGCCAATGGACTAACTTGTCTTTGGACCCTGAGGCCCAGAGGGCCTGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp TGTCTAAGGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGAGGAGAGTTTTGGGGCTaGGGTGAGTTGGGAGGCCAC +
Preference number: 2 (lower is better)
Translates to: CLRCSAGKDCEAASRGWRGEFWG*GELGGH
Trigger: GTGGCCTCCCAACTCACCCCAGCCCCAAAACTCTCC...TCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACCTTAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp CCATGGAAGGGGGACCAACTGGCCCCAGCGGCTTCCTCACAAAGGAGGCAGGGCGACAAGTTAGTCCATTaGCAGGGACTGTCTAAGGTG +
Preference number: 2 (lower is better)
Translates to: PWKGDQLAPAASSQRRQGDKLVH*QGLSKV
Trigger: CACCTTAGACAGTCCCTGCCAATGGACTAACTTGTC...GCCCTGCCTCCTTTGTGAGGAAGCCGCTGGGGCCAGTTGGTCCCCCTTCCATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp AGGGAGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGCTTTCCTGGGCTTCTTaGACATGTGTCTGGAGCCCT +
Preference number: 2 (lower is better)
Translates to: REPSLRKESGVCGVGPQGLSWAS*TCVWSP
Trigger: AGGGCTCCAGACACATGTCCAAGAAGCCCAGGAAAG...CCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR CAA 90 bp ATTTGGGGGCCCACAGGGCAGGGTCTGTGCTATCAACTCACTCCCTaGCAGGCCCTCTGGGCCTCAGGGTCCAAAGACAAGTTAGTCCAT +
Preference number: 2 (lower is better)
Translates to: IWGPTGQGLCYQLTP*QALWASGSKDKLVH
Trigger: ATGGACTAACTTGTCTTTGGACCCTGAGGCCCAGAGGGCCTGCAAGGGAGTGAGTTGATAGCACAGACCCTGCCCTGTGGGCCCCCAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR GCA 90 bp AGGGAGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGAGGGACTGTCTAAGGTaGTCTGCTGGTAAGGACTGT +
Preference number: 2 (lower is better)
Translates to: REPSLRKESGVCGVGPQGRDCLR*SAGKDC
Trigger: ACAGTCCTTACCAGCAGAGCACCTTAGACAGTCCCT...CCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR GCA 90 bp CCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGGGATGGTCTCTGCTCTaGCCATTTCCATTTGGGGGC +
Preference number: 2 (lower is better)
Translates to: PASGKNLACVGWDHKGLVGWSLL*PFPFGG
Trigger: GCCCCCAAATGGAAATGGGCAGAGCAGAGACCATCC...CACAAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp AGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACCAGGGACCGACAAGTTAGTCCATTaGCAGGGACTGTCTAAGGTG +
Preference number: 2 (lower is better)
Translates to: RRQGSGTIQGRGELPPGTDKLVH*QGLSKV
Trigger: CACCTTAGACAGTCCCTGCCAATGGACTAACTTGTC...GGTCCCTGGTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR TCA 90 bp GGGAGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTTCCCAGGCAGCTGTCTaGATCAAACAACTAGACACA +
Preference number: 2 (lower is better)
Translates to: GSPASGKNLACVGWDHKGSQAAV*IKQLDT
Trigger: TGTGTCTAGTTGTTTGATTCAGACAGCTGCCTGGGA...ACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR GCA 90 bp AGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACCAGGGACCACCACACTAGCCTCATaGAAGAAAAGACATGTCACC +
Preference number: 2 (lower is better)
Translates to: RRQGSGTIQGRGELPPGTTTLAS*KKRHVT
Trigger: GGTGACATGTCTTTTCTTGCATGAGGCTAGTGTGGT...GGTCCCTGGTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR GCA 90 bp AGGGAGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTTCAGGGATGGTCTCTaGTCTGCCCATTTCCATTTG +
Preference number: 2 (lower is better)
Translates to: REPSLRKESGVCGVGPQGFRDGL*SAHFHL
Trigger: CAAATGGAAATGGGCAGAGCAGAGACCATCCCTGAA...CCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR GCA 90 bp CCTCAGGTAGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACGAACCCCTGACTTTATaGCTACAACTTCCCCTTTCC +
Preference number: 2 (lower is better)
Translates to: PQVDGKGRGQSKGEVSCHEPLTL*LQLPLS
Trigger: GGAAAGGGGAAGTTGTAGGCATAAAGTCAGGGGTTC...GTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCTACCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp AGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTTCATTGGGGCTGGGATaGCGTCAAAGGGAACCTCTA +
Preference number: 2 (lower is better)
Translates to: SPASGKNLACVGWDHKGLSLGLG*RQREPL
Trigger: TAGAGGTTCCCTTTGACGCCATCCCAGCCCCAATGA...AAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp AGGGAGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTGCTCATGTGTGAGATaGGAGGACTGTAGTACTCAC +
Preference number: 2 (lower is better)
Translates to: REPSLRKESGVCGVGPQGCSCVR*EDCSTH
Trigger: GTGAGTACTACAGTCCTCCCATCTCACACATGAGCA...CCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp TTGCAGGCCCTCTGGGCCTCAGGGTCCAAAGACAAGTTAGTCCATTGGCAGGGAAGGGCAGAGCCTCACTaGAAGCAGTGCCAGGAAACA +
Preference number: 2 (lower is better)
Translates to: LQALWASGSKDKLVHWQGRAEPH*KQCQET
Trigger: TGTTTCCTGGCACTGCTTCCAGTGAGGCTCTGCCCT...TCCCTGCCAATGGACTAACTTGTCTTTGGACCCTGAGGCCCAGAGGGCCTGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp TGGAAAACATCATGGAAATCCCTGGTCCTGTCTGCGGTGGGGACAAAGGTGAAGCCCTTGCAGGCCCTCTaGGCCTCAGGGTCCAAAGAC +
Preference number: 2 (lower is better)
Translates to: WKTSWKSLVLSAVGTKVKPLQAL*ASGSKD
Trigger: GTCTTTGGACCCTGAGGCCCAGAGGGCCTGCAAGGG...CTTCACCTTTGTCCCCACCGCAGACAGGACCAGGGATTTCCATGATGTTTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp CCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGTCCTGGAGCCTTTCCTaGGCTTCTTGGACATGTGTC +
Preference number: 2 (lower is better)
Translates to: PASGKNLACVGWDHKGLVSWSLS*ASWTCV
Trigger: GACACATGTCCAAGAAGCCCAGGAAAGGCTCCAGGA...CACAAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR GCA 90 bp TGGAAAACATCATGGAAATCCCTGGTCCTGTCTGCGGTGGGGACAAAGGTGAAGTGGCCTCCTGGGGAATaGCTGGGAGCTTGGAGCTTG +
Preference number: 2 (lower is better)
Translates to: WKTSWKSLVLSAVGTKVKWPPGE*LGAWSL
Trigger: CAAGCTCCAAGCTCCCAGGCATTCCCCAGGAGGCCA...CTTCACCTTTGTCCCCACCGCAGACAGGACCAGGGATTTCCATGATGTTTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR GCA 90 bp GGGAGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTACCACACTAGCCTCATaGAAGAAAAGACATGTCACC +
Preference number: 2 (lower is better)
Translates to: GSPASGKNLACVGWDHKGTTLAS*KKRHVT
Trigger: GGTGACATGTCTTTTCTTGCATGAGGCTAGTGTGGT...ACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR GCA 90 bp AGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTAGGGACTGTCTAAGGTaGTCTGCTGGTAAGGACTGT +
Preference number: 2 (lower is better)
Translates to: SPASGKNLACVGWDHKGLRDCLR*SAGKDC
Trigger: ACAGTCCTTACCAGCAGAGCACCTTAGACAGTCCCT...AAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp CCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGATTGTTCATTGGGGCTaGGATGGCGTCAAAGGGAAC +
Preference number: 2 (lower is better)
Translates to: PASGKNLACVGWDHKGLVIVHWG*DGVKGN
Trigger: GTTCCCTTTGACGCCATCCCAGCCCCAATGAACAAT...CACAAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR TCA 90 bp TGGAAAACATCATGGAAATCCCTGGTCCTGTCTGCGGTGGGGACAAAGGTGAAGAGGGCCTCAGGTCAATaGGTGTTGTCAGGGGGACAG +
Preference number: 2 (lower is better)
Translates to: WKTSWKSLVLSAVGTKVKRASGQ*VLSGGQ
Trigger: CTGTCCCCCTGACAACACTCATTGACCTGAGGCCCT...CTTCACCTTTGTCCCCACCGCAGACAGGACCAGGGATTTCCATGATGTTTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR GCA 90 bp GTGTTGTCAGGGGGACAGGTATTCCTTACCTCCCTCTTTCCTTTCACAGATGGGGAGACACAATCAGGTTaGAGGGAGTGGGCAGAGGGC +
Preference number: 2 (lower is better)
Translates to: VLSGGQVFLTSLFPFTDGETQSG*REWAEG
Trigger: GCCCTCTGCCCACTCCCTGCAACCTGATTGTGTCTC...CCCATCTGTGAAAGGAAAGAGGGAGGTAAGGAATACCTGTCCCCCTGACAACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp GTGTTGTCAGGGGGACAGGTATTCCTTACCTCCCTCTTTCCTTTCACAGATGGGGAATGCCTGGGAGCTTaGAGCTTGTGCACCTGGAGG +
Preference number: 2 (lower is better)
Translates to: VLSGGQVFLTSLFPFTDGECLGA*SLCTWR
Trigger: CCTCCAGGTGCACAAGCTCCAAGCTCCCAGGCATTC...CCCATCTGTGAAAGGAAAGAGGGAGGTAAGGAATACCTGTCCCCCTGACAACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp TGTCTAAGGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGAATTGTTCATTGGGGCTaGGATGGCGTCAAAGGGAAC +
Preference number: 2 (lower is better)
Translates to: CLRCSAGKDCEAASRGWRIVHWG*DGVKGN
Trigger: GTTCCCTTTGACGCCATCCCAGCCCCAATGAACAAT...TCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACCTTAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp GGAAGCAGTGCCAGGAAACACCACACTAGCCTCATGCAAGAAAAGACATGTCACACTCACAGGGCAGCATaGGTCAGAAGGGGCTGGGCA +
Preference number: 2 (lower is better)
Translates to: GSSARKHHTSLMQEKTCHTHRAA*VRRGWA
Trigger: TGCCCAGCCCCTTCTGACCCATGCTGCCCTGTGAGT...GTGACATGTCTTTTCTTGCATGAGGCTAGTGTGGTGTTTCCTGGCACTGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp CCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGTGCTCATGTGTGAGATaGGAGGACTGTAGTACTCAC +
Preference number: 2 (lower is better)
Translates to: PASGKNLACVGWDHKGLVCSCVR*EDCSTH
Trigger: GTGAGTACTACAGTCCTCCCATCTCACACATGAGCA...CACAAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp CAGATACCCTTATCTCCCCTTCCCACAATGCCTAACCAAGGGCAGAGCCTCACTAAGACATGTCACCAGTaGGGGCGTGGGCTCTGTACA +
Preference number: 2 (lower is better)
Translates to: QIPLSPLPTMPNQGQSLTKTCHQ*GRGLCT
Trigger: TGTACAGAGCCCACGCCCCCACTGGTGACATGTCTT...AGTGAGGCTCTGCCCTTGGTTAGGCATTGTGGGAAGGGGAGATAAGGGTATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp CAGGCCCTGAGCTTCCTGAATATGCTGCGCCACACCCAGCAGGGGAGTGCAGAGTCATGGAAAACATCATaGAAATCCCTGGTCCTGTCT +
Preference number: 2 (lower is better)
Translates to: QALSFLNMLRHTQQGSAESWKTS*KSLVLS
Trigger: AGACAGGACCAGGGATTTCCATGATGTTTTCCATGA...CTCTGCACTCCCCTGCTGGGTGTGGCGCAGCATATTCAGGAAGCTCAGGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp GTGTTGTCAGGGGGACAGGTATTCCTTACCTCCCTCTTTCCTTTCACAGATGGGAGGGCAGAGCCTCACTaGAAGCAGTGCCAGGAAACA +
Preference number: 2 (lower is better)
Translates to: VLSGGQVFLTSLFPFTDGRAEPH*KQCQET
Trigger: TGTTTCCTGGCACTGCTTCCAGTGAGGCTCTGCCCT...CCCATCTGTGAAAGGAAAGAGGGAGGTAAGGAATACCTGTCCCCCTGACAACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp TTGCAGGCCCTCTGGGCCTCAGGGTCCAAAGACAAGTTAGTCCATTGGCAGGGACAGATGGGAGTATGTTaGTGGCTTGATGGTGGAACT +
Preference number: 2 (lower is better)
Translates to: LQALWASGSKDKLVHWQGQMGVC*WLDGGT
Trigger: AGTTCCACCATCAAGCCACCAACATACTCCCATCTG...TCCCTGCCAATGGACTAACTTGTCTTTGGACCCTGAGGCCCAGAGGGCCTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR TCA 90 bp CAGATACCCTTATCTCCCCTTCCCACAATGCCTAACCAAGGGCAGAGCCTCACTCCTGATGCTCATGTGTaGGATGGGAGGACTGTAGTA +
Preference number: 2 (lower is better)
Translates to: QIPLSPLPTMPNQGQSLTPDAHV*DGRTVV
Trigger: TACTACAGTCCTCCCATCTCACACATGAGCATCAGG...AGTGAGGCTCTGCCCTTGGTTAGGCATTGTGGGAAGGGGAGATAAGGGTATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp GTCCCTTTCAGAAACAAACAGGGGACTCATGGAAAACATCATGGAAATCCCTGGGGAGAGTTTTGGGGCTaGGGTGAGTTGGGAGGCCAC +
Preference number: 2 (lower is better)
Translates to: VPFRNKQGTHGKHHGNPWGEFWG*GELGGH
Trigger: GTGGCCTCCCAACTCACCCCAGCCCCAAAACTCTCC...CCAGGGATTTCCATGATGTTTTCCATGAGTCCCCTGTTTGTTTCTGAAAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR CAA 90 bp CAGCATGGGTCAGAAGGGGCTGGGCATTTAATAAATAATTGTTCATaGGGGCTGGGATGGCGTCAAAGGGAACCTCTAACCAGCCAGCAG +
Preference number: 2 (lower is better)
Translates to: QHGSEGAGHLINNCS*GLGWRQREPLTSQQ
Trigger: CTGCTGGCTGGTTAGAGGTTCCCTTTGACGCCATCCCAGCCCCAATGAACAATTATTTATTAAATGCCCAGCCCCTTCTGACCCATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR TCA 90 bp CAGATACCCTTATCTCCCCTTCCCACAATGCCTAACCAAGGGCAGAGCCTCACTTCCCAGGCAGCTGTCTaGATCAAACAACTAGACACA +
Preference number: 2 (lower is better)
Translates to: QIPLSPLPTMPNQGQSLTSQAAV*IKQLDT
Trigger: TGTGTCTAGTTGTTTGATTCAGACAGCTGCCTGGGA...AGTGAGGCTCTGCCCTTGGTTAGGCATTGTGGGAAGGGGAGATAAGGGTATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR TCA 90 bp TGGAAAACATCATGGAAATCCCTGGTCCTGTCTGCGGTGGGGACAAAGGTGAAGCCTGATGCTCATGTGTaGGATGGGAGGACTGTAGTA +
Preference number: 2 (lower is better)
Translates to: WKTSWKSLVLSAVGTKVKPDAHV*DGRTVV
Trigger: TACTACAGTCCTCCCATCTCACACATGAGCATCAGG...CTTCACCTTTGTCCCCACCGCAGACAGGACCAGGGATTTCCATGATGTTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR GCA 90 bp GTCCCTTTCAGAAACAAACAGGGGACTCATGGAAAACATCATGGAAATCCCTGGGGAGCTTGGAGCTTGTaGACCTGGAGGATCCCACCT +
Preference number: 2 (lower is better)
Translates to: VPFRNKQGTHGKHHGNPWGAWSL*TWRIPP
Trigger: AGGTGGGATCCTCCAGGTGCACAAGCTCCAAGCTCC...CCAGGGATTTCCATGATGTTTTCCATGAGTCCCCTGTTTGTTTCTGAAAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp GGAAGCAGTGCCAGGAAACACCACACTAGCCTCATGCAAGAAAAGACATGTCACTCATTGGGGCTGGGATaGCGTCAAAGGGAACCTCTA +
Preference number: 2 (lower is better)
Translates to: GSSARKHHTSLMQEKTCHSLGLG*RQREPL
Trigger: TAGAGGTTCCCTTTGACGCCATCCCAGCCCCAATGA...GTGACATGTCTTTTCTTGCATGAGGCTAGTGTGGTGTTTCCTGGCACTGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp GTCCCTTTCAGAAACAAACAGGGGACTCATGGAAAACATCATGGAAATCCCTGGCGGGGCCTTCAGGGATaGTCTCTGCTCTGCCCATTT +
Preference number: 2 (lower is better)
Translates to: VPFRNKQGTHGKHHGNPWRGLQG*SLLCPF
Trigger: AAATGGGCAGAGCAGAGACCATCCCTGAAGGCCCCG...CCAGGGATTTCCATGATGTTTTCCATGAGTCCCCTGTTTGTTTCTGAAAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR TCA 90 bp GTGTTGTCAGGGGGACAGGTATTCCTTACCTCCCTCTTTCCTTTCACAGATGGGTCCCAGGCAGCTGTCTaGATCAAACAACTAGACACA +
Preference number: 2 (lower is better)
Translates to: VLSGGQVFLTSLFPFTDGSQAAV*IKQLDT
Trigger: TGTGTCTAGTTGTTTGATTCAGACAGCTGCCTGGGA...CCCATCTGTGAAAGGAAAGAGGGAGGTAAGGAATACCTGTCCCCCTGACAACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR GCA 90 bp TGGAAAACATCATGGAAATCCCTGGTCCTGTCTGCGGTGGGGACAAAGGTGAAGTTCAGGGATGGTCTCTaGTCTGCCCATTTCCATTTG +
Preference number: 2 (lower is better)
Translates to: WKTSWKSLVLSAVGTKVKFRDGL*SAHFHL
Trigger: CAAATGGAAATGGGCAGAGCAGAGACCATCCCTGAA...CTTCACCTTTGTCCCCACCGCAGACAGGACCAGGGATTTCCATGATGTTTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp TATGTTGGTGGCTTGATGGTGGAACTAGGATCAGAACCCAGCCTTCAGACTCAGATTGTTCATTGGGGCTaGGATGGCGTCAAAGGGAAC +
Preference number: 2 (lower is better)
Translates to: YVGGLMVELGSEPSLQTQIVHWG*DGVKGN
Trigger: GTTCCCTTTGACGCCATCCCAGCCCCAATGAACAAT...CTGAGTCTGAAGGCTGGGTTCTGATCCTAGTTCCACCATCAAGCCACCAACATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp GTGTTGTCAGGGGGACAGGTATTCCTTACCTCCCTCTTTCCTTTCACAGATGGGTGCTCATGTGTGAGATaGGAGGACTGTAGTACTCAC +
Preference number: 2 (lower is better)
Translates to: VLSGGQVFLTSLFPFTDGCSCVR*EDCSTH
Trigger: GTGAGTACTACAGTCCTCCCATCTCACACATGAGCA...CCCATCTGTGAAAGGAAAGAGGGAGGTAAGGAATACCTGTCCCCCTGACAACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp GTCCCTTTCAGAAACAAACAGGGGACTCATGGAAAACATCATGGAAATCCCTGGAAGACATGTCACCAGTaGGGGCGTGGGCTCTGTACA +
Preference number: 2 (lower is better)
Translates to: VPFRNKQGTHGKHHGNPWKTCHQ*GRGLCT
Trigger: TGTACAGAGCCCACGCCCCCACTGGTGACATGTCTT...CCAGGGATTTCCATGATGTTTTCCATGAGTCCCCTGTTTGTTTCTGAAAGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR TCA 90 bp GTCCCTTTCAGAAACAAACAGGGGACTCATGGAAAACATCATGGAAATCCCTGGAGTGTTTTCAAGGAGTaGGAGAGGTGGGAAGGGAGC +
Preference number: 2 (lower is better)
Translates to: VPFRNKQGTHGKHHGNPWSVFKE*ERWEGS
Trigger: GCTCCCTTCCCACCTCTCTCACTCCTTGAAAACACT...CCAGGGATTTCCATGATGTTTTCCATGAGTCCCCTGTTTGTTTCTGAAAGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp GTCCCTTTCAGAAACAAACAGGGGACTCATGGAAAACATCATGGAAATCCCTGGGAAGCATCAGGAATGTaGCTGCTCCTGGAGCCTTTC +
Preference number: 2 (lower is better)
Translates to: VPFRNKQGTHGKHHGNPWEASGM*LLLEPF
Trigger: GAAAGGCTCCAGGAGCAGCCACATTCCTGATGCTTC...CCAGGGATTTCCATGATGTTTTCCATGAGTCCCCTGTTTGTTTCTGAAAGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR GCA 90 bp TATGTTGGTGGCTTGATGGTGGAACTAGGATCAGAACCCAGCCTTCAGACTCAGACCACACTAGCCTCATaGAAGAAAAGACATGTCACC +
Preference number: 2 (lower is better)
Translates to: YVGGLMVELGSEPSLQTQTTLAS*KKRHVT
Trigger: GGTGACATGTCTTTTCTTGCATGAGGCTAGTGTGGT...CTGAGTCTGAAGGCTGGGTTCTGATCCTAGTTCCACCATCAAGCCACCAACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CCA 90 bp GTCCCTTTCAGAAACAAACAGGGGACTCATGGAAAACATCATGGAAATCCCTGGCAGATGGGAGTATGTTaGTGGCTTGATGGTGGAACT +
Preference number: 2 (lower is better)
Translates to: VPFRNKQGTHGKHHGNPWQMGVC*WLDGGT
Trigger: AGTTCCACCATCAAGCCACCAACATACTCCCATCTG...CCAGGGATTTCCATGATGTTTTCCATGAGTCCCCTGTTTGTTTCTGAAAGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR CAA 90 bp TTTCCAAAGTCTTCCTACTCTTTCCAAAGTCTTCCTAGATCATCCTaGTCCATGTCCTGCTTGGAGAAACTAACAAAGTCCATGGAAGGG +
Preference number: 2 (lower is better)
Translates to: FPKSSYSFQSLPRSS*SMSCLEKLTKSMEG
Trigger: CCCTTCCATGGACTTTGTTAGTTTCTCCAAGCAGGACATGGACAAGGATGATCTAGGAAGACTTTGGAAAGAGTAGGAAGACTTTGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR GCA 72 bp CAGAGGCTGGGCCCAGGTTGGTGGGGAGCAGAACTCTaGCACGTGGCGGCAGTGGAGACGGGAGGCACTCGG +
Preference number: 3 (lower is better)
Translates to: QRLGPGWWGAEL*HVAAVETGGTR
Trigger: CCGAGTGCCTCCCGTCTCCACTGCCGCCACGTGGCAGAGTTCTGCTCCCCACCAACCTGGGCCCAGCCTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564948.1
3UTR-3UTR CAA 90 bp CCATGGAAGGGGGACCAACTGGCCCCAGCGGCTTCCTCACAAAGGAGGCAGGGCGCTCAGGCCAGGCCCTaGGGTGGGGGTGGGTATGAG +
Preference number: 3 (lower is better)
Translates to: PWKGDQLAPAASSQRRQGAQARP*GGGGYE
Trigger: CTCATACCCACCCCCACCCAAGGGCCTGGCCTGAGC...GCCCTGCCTCCTTTGTGAGGAAGCCGCTGGGGCCAGTTGGTCCCCCTTCCATGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR CCA 72 bp CAGACTCGTCCATTCCCCCGGCGGCAGGGGTGGTCCTaGGCTTCACCTCGCCGATCTGCTTCTCGAAGGTGC +
Preference number: 3 (lower is better)
Translates to: QTRPFPRRQGWS*ASPRRSASRRC
Trigger: GCACCTTCGAGAAGCAGATCGGCGAGGTGAAGCCCAGGACCACCCCTGCCGCCGGGGGAATGGACGAGTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564948.1
3UTR CCA 72 bp GGACCACAGACTCGTCCATTCCCCCGGCGGCAGGGGTaGTCCTGGGCTTCACCTCGCCGATCTGCTTCTCGA +
Preference number: 3 (lower is better)
Translates to: GPQTRPFPRRQG*SWASPRRSASR
Trigger: TCGAGAAGCAGATCGGCGAGGTGAAGCCCAGGACCACCCCTGCCGCCGGGGGAATGGACGAGTCTGTGGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564948.1
3UTR CCA 72 bp TGGGCCCAGGTTGGTGGGGAGCAGAACTCTGCCACGTaGCGGCAGTGGAGACGGGAGGCACTCGGAAAAGCT +
Preference number: 3 (lower is better)
Translates to: WAQVGGEQNSAT*RQWRREALGKA
Trigger: AGCTTTTCCGAGTGCCTCCCGTCTCCACTGCCGCCACGTGGCAGAGTTCTGCTCCCCACCAACCTGGGCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564948.1
3UTR-3UTR CAA 90 bp AGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACCAGGGACCCTGGGAGCTTGGAGCTaGTGCACCTGGAGGATCCCA +
Preference number: 3 (lower is better)
Translates to: RRQGSGTIQGRGELPPGTLGAWS*CTWRIP
Trigger: TGGGATCCTCCAGGTGCACAAGCTCCAAGCTCCCAG...GGTCCCTGGTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CAA 90 bp TGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGGCCTGGCTGCCTGCAGGAGCCTTTCCTGGGCTTCTaGGACATGTGTCTGGAGCCC +
Preference number: 3 (lower is better)
Translates to: WRVWGGTTRVLWPGCLQEPFLGF*DMCLEP
Trigger: GGGCTCCAGACACATGTCCAAGAAGCCCAGGAAAGG...CTCCTGCAGGCAGCCAGGCCACAAGACCCTTGTGGTCCCACCCCACACACGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CAA 90 bp TTGCAGGCCCTCTGGGCCTCAGGGTCCAAAGACAAGTTAGTCCATTGGCAGGGAGCTCAGGCCAGGCCCTaGGGTGGGGGTGGGTATGAG +
Preference number: 3 (lower is better)
Translates to: LQALWASGSKDKLVHWQGAQARP*GGGGYE
Trigger: CTCATACCCACCCCCACCCAAGGGCCTGGCCTGAGC...TCCCTGCCAATGGACTAACTTGTCTTTGGACCCTGAGGCCCAGAGGGCCTGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CAA 90 bp AGGGAGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGGGAATGCCTGGGAGCTaGGAGCTTGTGCACCTGGAG +
Preference number: 3 (lower is better)
Translates to: REPSLRKESGVCGVGPQGGMPGS*ELVHLE
Trigger: CTCCAGGTGCACAAGCTCCAAGCTCCCAGGCATTCC...CCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CAA 90 bp CAGGCCCTGAGCTTCCTGAATATGCTGCGCCACACCCAGCAGGGGAGTGCAGAGGGAATGCCTGGGAGCTaGGAGCTTGTGCACCTGGAG +
Preference number: 3 (lower is better)
Translates to: QALSFLNMLRHTQQGSAEGMPGS*ELVHLE
Trigger: CTCCAGGTGCACAAGCTCCAAGCTCCCAGGCATTCC...CTCTGCACTCCCCTGCTGGGTGTGGCGCAGCATATTCAGGAAGCTCAGGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CAA 90 bp CAGGCCCTGAGCTTCCTGAATATGCTGCGCCACACCCAGCAGGGGAGTGCAGAGGGGCAGCACAGCGTCTaGCTCTCTATGGACCAGAGC +
Preference number: 3 (lower is better)
Translates to: QALSFLNMLRHTQQGSAEGQHSV*LSMDQS
Trigger: GCTCTGGTCCATAGAGAGCAAGACGCTGTGCTGCCC...CTCTGCACTCCCCTGCTGGGTGTGGCGCAGCATATTCAGGAAGCTCAGGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR GCA 72 bp GTGCTTCCTGGGAAGAAGGAGTCGGCTCCAGGCTACTaGTTTCGCCTGTGGCTTCGGGCTCCAGGACCACAG +
Preference number: 3 (lower is better)
Translates to: VLPGKKESAPGY*FRLWLRAPGPQ
Trigger: CTGTGGTCCTGGAGCCCGAAGCCACAGGCGAAAGCAGTAGCCTGGAGCCGACTCCTTCTTCCCAGGAAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564948.1
3UTR CCA 72 bp AGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTaGGACCACAAGGGTCTTGTGGCCTGGCTGCCTGCA +
Preference number: 3 (lower is better)
Translates to: SPASGKNLACVG*DHKGLVAWLPA
Trigger: TGCAGGCAGCCAGGCCACAAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR CCA 72 bp AAGGGAGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTaGGGTGGGACCACAAGGGTCTTGTGGCCTGGCTGC +
Preference number: 3 (lower is better)
Translates to: KGAQPQERIWRV*GGTTRVLWPGC
Trigger: GCAGCCAGGCCACAAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCTCCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CAA 90 bp AGGGAGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGCCTTTCCTGGGCTTCTaGGACATGTGTCTGGAGCCC +
Preference number: 3 (lower is better)
Translates to: REPSLRKESGVCGVGPQGPFLGF*DMCLEP
Trigger: GGGCTCCAGACACATGTCCAAGAAGCCCAGGAAAGG...CCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR CCA 72 bp GCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGGCCTaGCTGCCTGCAGGAGTCTCTGAAGAAGCATCAGGA +
Preference number: 3 (lower is better)
Translates to: ACVGWDHKGLVA*LPAGVSEEASG
Trigger: TCCTGATGCTTCTTCAGAGACTCCTGCAGGCAGCCAGGCCACAAGACCCTTGTGGTCCCACCCCACACACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR CCA 72 bp CCAGGTGGGCAGGGCAGCACAGCGTCTTGCTCTCTATaGACCAGAGCTGGGTTTCCTTCCTCCAAGCACCCA +
Preference number: 3 (lower is better)
Translates to: PGGQGSTASCSL*TRAGFPSSKHP
Trigger: TGGGTGCTTGGAGGAAGGAAACCCAGCTCTGGTCCATAGAGAGCAAGACGCTGTGCTGCCCTGCCCACCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR TCA 72 bp GGGAGTGGGCAGAGGGCCTGGCCTGATGCTCATGTGTaGGATGGGAGGACTGTAGTACTCACAGGGCAGCAT +
Preference number: 3 (lower is better)
Translates to: GSGQRAWPDAHV*DGRTVVLTGQH
Trigger: ATGCTGCCCTGTGAGTACTACAGTCCTCCCATCTCACACATGAGCATCAGGCCAGGCCCTCTGCCCACTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR CCA 72 bp ATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTaGCCTGGCTGCCTGCAGGAGTCTCTGAAGAAGCAT +
Preference number: 3 (lower is better)
Translates to: IWRVWGGTTRVL*PGCLQESLKKH
Trigger: ATGCTTCTTCAGAGACTCCTGCAGGCAGCCAGGCCACAAGACCCTTGTGGTCCCACCCCACACACGCCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR CCA 72 bp GGAGAAACTAACAAAGTCCATGGAAGGGGGACCAACTaGCCCCAGCGGCTTCCTCACAAAGGAGGCAGGGCC +
Preference number: 3 (lower is better)
Translates to: GETNKVHGRGTN*PQRLPHKGGRA
Trigger: GGCCCTGCCTCCTTTGTGAGGAAGCCGCTGGGGCCAGTTGGTCCCCCTTCCATGGACTTTGTTAGTTTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR CCA 72 bp AAGAAGGAGTCGGCTCCAGGCTACTGCTTTCGCCTGTaGCTTCGGGCTCCAGGACCACAGACTCGTCCATTC +
Preference number: 3 (lower is better)
Translates to: KKESAPGYCFRL*LRAPGPQTRPF
Trigger: GAATGGACGAGTCTGTGGTCCTGGAGCCCGAAGCCACAGGCGAAAGCAGTAGCCTGGAGCCGACTCCTTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564948.1
3UTR-3UTR CAA 90 bp GTGTTGTCAGGGGGACAGGTATTCCTTACCTCCCTCTTTCCTTTCACAGATGGGGCTCAGGCCAGGCCCTaGGGTGGGGGTGGGTATGAG +
Preference number: 3 (lower is better)
Translates to: VLSGGQVFLTSLFPFTDGAQARP*GGGGYE
Trigger: CTCATACCCACCCCCACCCAAGGGCCTGGCCTGAGC...CCCATCTGTGAAAGGAAAGAGGGAGGTAAGGAATACCTGTCCCCCTGACAACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CAA 90 bp TGTCTAAGGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGACTGGGAGCTTGGAGCTaGTGCACCTGGAGGATCCCA +
Preference number: 3 (lower is better)
Translates to: CLRCSAGKDCEAASRGWRLGAWS*CTWRIP
Trigger: TGGGATCCTCCAGGTGCACAAGCTCCAAGCTCCCAG...TCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACCTTAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CAA 90 bp TGTGTGAGATGGGAGGACTGTAGTACTCACAGGGCAGCATGGGTCAGAAGGGGCGGAATGCCTGGGAGCTaGGAGCTTGTGCACCTGGAG +
Preference number: 3 (lower is better)
Translates to: CVRWEDCSTHRAAWVRRGGMPGS*ELVHLE
Trigger: CTCCAGGTGCACAAGCTCCAAGCTCCCAGGCATTCC...GCCCCTTCTGACCCATGCTGCCCTGTGAGTACTACAGTCCTCCCATCTCACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR GCA 72 bp GTGTGGGGTGGGACCACAAGGGTCTTGTGGCCTGGCTaGCTGCAGGAGTCTCTGAAGAAGCATCAGGAATGT +
Preference number: 3 (lower is better)
Translates to: VWGGTTRVLWPG*LQESLKKHQEC
Trigger: ACATTCCTGATGCTTCTTCAGAGACTCCTGCAGGCAGCCAGGCCACAAGACCCTTGTGGTCCCACCCCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR GCA 72 bp CTGGAAGCAGTGCCAGGAAACACCACACTAGCCTCATaGAAGAAAAGACATGTCACCAGTGGGGGCGTGGGC +
Preference number: 3 (lower is better)
Translates to: LEAVPGNTTLAS*KKRHVTSGGVG
Trigger: GCCCACGCCCCCACTGGTGACATGTCTTTTCTTGCATGAGGCTAGTGTGGTGTTTCCTGGCACTGCTTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR CCA 72 bp TCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTaGAGAGAAGGGCCTCAGGTCAATGAGTGTTGTCAG +
Preference number: 3 (lower is better)
Translates to: SAGKDCEAASRG*REGPQVNECCQ
Trigger: CTGACAACACTCATTGACCTGAGGCCCTTCTCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR CCA 72 bp GGGCAGCACAGCGTCTTGCTCTCTATGGACCAGAGCTaGGTTTCCTTCCTCCAAGCACCCATCTGTGAAGGA +
Preference number: 3 (lower is better)
Translates to: GQHSVLLSMDQS*VSFLQAPICEG
Trigger: TCCTTCACAGATGGGTGCTTGGAGGAAGGAAACCCAGCTCTGGTCCATAGAGAGCAAGACGCTGTGCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CAA 90 bp GGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGAGAAGGGCATAAATAATTGTTCATaGGGGCTGGGATGGCGTCAA +
Preference number: 3 (lower is better)
Translates to: GALLVRTVRLHPGAGEKGINNCS*GLGWRQ
Trigger: TTGACGCCATCCCAGCCCCAATGAACAATTATTTAT...GCCCTTCTCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CAA 90 bp ACCCAGCCCATAAGAGGCCCCTCAGGTAGACGGCAAGGGTCGGGGACAATCCAAATAAATAATTGTTCATaGGGGCTGGGATGGCGTCAA +
Preference number: 3 (lower is better)
Translates to: TQPIRGPSGRRQGSGTIQINNCS*GLGWRQ
Trigger: TTGACGCCATCCCAGCCCCAATGAACAATTATTTAT...TTGGATTGTCCCCGACCCTTGCCGTCTACCTGAGGGGCCTCTTATGGGCTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR GCA 72 bp AAAGTCACCAGATACCCTTATCTCCCCTTCCCACAATaGCTAACCAAGGGCAGAGCCTCACTGGAAGCAGTG +
Preference number: 3 (lower is better)
Translates to: KVTRYPYLPFPQ*LTKGRASLEAV
Trigger: CACTGCTTCCAGTGAGGCTCTGCCCTTGGTTAGGCATTGTGGGAAGGGGAGATAAGGGTATCTGGTGACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CAA 90 bp TTGCAGGCCCTCTGGGCCTCAGGGTCCAAAGACAAGTTAGTCCATTGGCAGGGAATAAATAATTGTTCATaGGGGCTGGGATGGCGTCAA +
Preference number: 3 (lower is better)
Translates to: LQALWASGSKDKLVHWQGINNCS*GLGWRQ
Trigger: TTGACGCCATCCCAGCCCCAATGAACAATTATTTAT...TCCCTGCCAATGGACTAACTTGTCTTTGGACCCTGAGGCCCAGAGGGCCTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR-3UTR CAA 90 bp GTCCCTTTCAGAAACAAACAGGGGACTCATGGAAAACATCATGGAAATCCCTGGCCTTTCCTGGGCTTCTaGGACATGTGTCTGGAGCCC +
Preference number: 3 (lower is better)
Translates to: VPFRNKQGTHGKHHGNPWPFLGF*DMCLEP
Trigger: GGGCTCCAGACACATGTCCAAGAAGCCCAGGAAAGG...CCAGGGATTTCCATGATGTTTTCCATGAGTCCCCTGTTTGTTTCTGAAAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
3UTR GCA 72 bp TTCCAAAGTCTTCCTAGATCATCCTTGTCCATGTCCTaGTTGGAGAAACTAACAAAGTCCATGGAAGGGGGA +
Preference number: 3 (lower is better)
Translates to: FQSLPRSSLSMS*LEKLTKSMEGG
Trigger: TCCCCCTTCCATGGACTTTGTTAGTTTCTCCAAGCAGGACATGGACAAGGATGATCTAGGAAGACTTTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp CTGTGGCTTCGGGCTCCAGGACCACAGACTCGTCCATTCCCCCGGCGGCAGGGGCCCCGGCGGCAGGGGTaGTCCTGGGCTTCACCTCGC +
Preference number: 4 (lower is better)
Translates to: LWLRAPGPQTRPFPRRQGPRRQG*SWASPR
Trigger: GCGAGGTGAAGCCCAGGACCACCCCTGCCGCCGGGG...CCCCTGCCGCCGGGGGAATGGACGAGTCTGTGGTCCTGGAGCCCGAAGCCACAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000564948.1
CDS-3UTR TCA 90 bp GCCAGGCCAGCCGGTGCAGCCCCATCCAGGCATGCTCGAGCCTTCAGCAGCCAACGCAGGTGGCCGGGGTaGCTGGCAACTGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: ARPAGAAPSRHARAFSSQRRWPG*LATAAG
Trigger: TCCTGCTGCAGTTGCCAGTCACCCCGGCCACCTGCG...TTGGCTGCTGAAGGCTCGAGCATGCCTGGATGGGGCTGCACCGGCTGGCCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp CCGGCGGCAGGGGTGGTCCTGGGCTTCACCTCGCCGATCTGCTTCTCGAAGGTGGCCACGTGGCGGCAGTaGAGACGGGAGGCACTCGGA +
Preference number: 4 (lower is better)
Translates to: PAAGVVLGFTSPICFSKVATWRQ*RREALG
Trigger: TCCGAGTGCCTCCCGTCTCCACTGCCGCCACGTGGC...CACCTTCGAGAAGCAGATCGGCGAGGTGAAGCCCAGGACCACCCCTGCCGCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564948.1
CDS-3UTR CCA 90 bp ACCACAGACTCGTCCATTCCCCCGGCGGCAGGGGTGGTCCTGGGCTTCACCTCGCCTCAGCCCAGAGGCTaGGCCCAGGTTGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: TTDSSIPPAAGVVLGFTSPQPRG*AQVGGE
Trigger: CTCCCCACCAACCTGGGCCCAGCCTCTGGGCTGAGG...CGAGGTGAAGCCCAGGACCACCCCTGCCGCCGGGGGAATGGACGAGTCTGTGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000564948.1
CDS-3UTR TCA 90 bp GGGAGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTTGCCACCAGGGACCCTaGGGGGCCAGGCCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: GSPASGKNLACVGWDHKGCHQGP*GARPAG
Trigger: ACCGGCTGGCCTGGCCCCTCAGGGTCCCTGGTGGCA...ACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp GGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGAGAAGGGCTGCCACCAGGGACCCTaGGGGGCCAGGCCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: GALLVRTVRLHPGAGEKGCHQGP*GARPAG
Trigger: ACCGGCTGGCCTGGCCCCTCAGGGTCCCTGGTGGCA...GCCCTTCTCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp TGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGGCCTGGCTGCCTGCAGGAGCTCTGCCACGGTCCCTaGATGGTCCTGGCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: WRVWGGTTRVLWPGCLQELCHGP*MVLARL
Trigger: GAGCCGGGCCAGGACCATTCAGGGACCGTGGCAGAG...CTCCTGCAGGCAGCCAGGCCACAAGACCCTTGTGGTCCCACCCCACACACGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR GCA 90 bp CAGGCCCTGAGCTTCCTGAATATGCTGCGCCACACCCAGCAGGGGAGTGCAGAGAGCAGCCCCACCGCCTaGCTCCGGGTGGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: QALSFLNMLRHTQQGSAESSPTA*LRVAAW
Trigger: CCAGGCTGCCACCCGGAGGCAGGCGGTGGGGCTGCT...CTCTGCACTCCCCTGCTGGGTGTGGCGCAGCATATTCAGGAAGCTCAGGGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp ACCACAGACTCGTCCATTCCCCCGGCGGCAGGGGTGGTCCTGGGCTTCACCTCGCGGCAGGGGTGGTCCTaGGCTTCACCTCGCCGATCT +
Preference number: 4 (lower is better)
Translates to: TTDSSIPPAAGVVLGFTSRQGWS*ASPRRS
Trigger: AGATCGGCGAGGTGAAGCCCAGGACCACCCCTGCCG...CGAGGTGAAGCCCAGGACCACCCCTGCCGCCGGGGGAATGGACGAGTCTGTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000564948.1
CDS-3UTR CCA 90 bp CCTCAGGTAGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACCCCCGGCGGCAGGGGTaGTCCTGGGCTTCACCTCGC +
Preference number: 4 (lower is better)
Translates to: PQVDGKGRGQSKGEVSCHPRRQG*SWASPR
Trigger: GCGAGGTGAAGCCCAGGACCACCCCTGCCGCCGGGG...GTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCTACCTGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGAGAAGGGCCCCCGGCGGCAGGGGTaGTCCTGGGCTTCACCTCGC +
Preference number: 4 (lower is better)
Translates to: GALLVRTVRLHPGAGEKGPRRQG*SWASPR
Trigger: GCGAGGTGAAGCCCAGGACCACCCCTGCCGCCGGGG...GCCCTTCTCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TCCCTGAGGAACCAGTCACGCCCGTCGGCAGCTCTGGGGAGGTCCCCAGGGCCCGCCCTCTGTGCTTCCTaGGAAGAAGGAGTCGGCTCC +
Preference number: 4 (lower is better)
Translates to: SLRNQSRPSAALGRSPGPALCAS*EEGVGS
Trigger: GGAGCCGACTCCTTCTTCCCAGGAAGCACAGAGGGC...GGGCCCTGGGGACCTCCCCAGAGCTGCCGACGGGCGTGACTGGTTCCTCAGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564948.1
CDS-3UTR CCA 90 bp TGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGGCCTGGCTGCCTGCAGGAGCCTCAGCCCAGAGGCTaGGCCCAGGTTGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: WRVWGGTTRVLWPGCLQEPQPRG*AQVGGE
Trigger: CTCCCCACCAACCTGGGCCCAGCCTCTGGGCTGAGG...CTCCTGCAGGCAGCCAGGCCACAAGACCCTTGTGGTCCCACCCCACACACGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp CCATGGAAGGGGGACCAACTGGCCCCAGCGGCTTCCTCACAAAGGAGGCAGGGCTGGGTGGAGGGGTCCTaGGTGGACGGGGCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: PWKGDQLAPAASSQRRQGWVEGS*VDGASE
Trigger: CTCTGAGGCCCCGTCCACCCAGGACCCCTCCACCCA...GCCCTGCCTCCTTTGTGAGGAAGCCGCTGGGGCCAGTTGGTCCCCCTTCCATGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GCCAGGCCAGCCGGTGCAGCCCCATCCAGGCATGCTCGAGCCTTCAGCAGCCAACCAGGCCCCCAGTCCTaGAAGGCATCCGTGTGCGCT +
Preference number: 4 (lower is better)
Translates to: ARPAGAAPSRHARAFSSQPGPQS*KASVCA
Trigger: AGCGCACACGGATGCCTTCCAGGACTGGGGGCCTGG...TTGGCTGCTGAAGGCTCGAGCATGCCTGGATGGGGCTGCACCGGCTGGCCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGAGAAGGGCCCGCCTGCCTCCGGGTaGCAGCCTGGGCGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: GALLVRTVRLHPGAGEKGPPASG*QPGRQG
Trigger: TCCCTGACGCCCAGGCTGCCACCCGGAGGCAGGCGG...GCCCTTCTCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp AGGGAGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGCCGCCTGCCTCCGGGTaGCAGCCTGGGCGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: REPSLRKESGVCGVGPQGPPASG*QPGRQG
Trigger: TCCCTGACGCCCAGGCTGCCACCCGGAGGCAGGCGG...CCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCTCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp ACCACAGACTCGTCCATTCCCCCGGCGGCAGGGGTGGTCCTGGGCTTCACCTCGTATCGGAGCCATGGCTaGGGGTGGGCAAGAGTCCCG +
Preference number: 4 (lower is better)
Translates to: TTDSSIPPAAGVVLGFTSYRSHG*GWARVP
Trigger: CGGGACTCTTGCCCACCCTCAGCCATGGCTCCGATA...CGAGGTGAAGCCCAGGACCACCCCTGCCGCCGGGGGAATGGACGAGTCTGTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000564948.1
CDS-3UTR TCA 90 bp AGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACCAGGGACCCTGGGGCTCTGTCCCTaGCCCCACACACGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: RRQGSGTIQGRGELPPGTLGLCP*PHTRWP
Trigger: AGGCCAGCGTGTGTGGGGTCAGGGACAGAGCCCCAG...GGTCCCTGGTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp CCATGGAAGGGGGACCAACTGGCCCCAGCGGCTTCCTCACAAAGGAGGCAGGGCAGGGGTCCAGCTGCCTaGAGCCACTGGCTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: PWKGDQLAPAASSQRRQGRGPAA*SHWLPA
Trigger: AGCAGGGAGCCAGTGGCTTCAGGCAGCTGGACCCCT...GCCCTGCCTCCTTTGTGAGGAAGCCGCTGGGGCCAGTTGGTCCCCCTTCCATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp CCTCAGGTAGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACCCCGGGCTGTCTCAGTaGCTAAGCCTGGGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: PQVDGKGRGQSKGEVSCHPGLSQ*LSLGGA
Trigger: GGCCCCGCCCAGGCTTAGTCACTGAGACAGCCCGGG...GTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCTACCTGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp GCCAGGCCAGCCGGTGCAGCCCCATCCAGGCATGCTCGAGCCTTCAGCAGCCAACACTCCCACCCTCTCTaGGCTGCCAGAGTGACCCCA +
Preference number: 4 (lower is better)
Translates to: ARPAGAAPSRHARAFSSQHSHPL*AARVTP
Trigger: TGGGGTCACTCTGGCAGCTCAGAGAGGGTGGGAGTG...TTGGCTGCTGAAGGCTCGAGCATGCCTGGATGGGGCTGCACCGGCTGGCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp TGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGGCCTGGCTGCCTGCAGGAGAGACGTGGGCCATGCTaGCAGGCCCCCAGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: WRVWGGTTRVLWPGCLQERRGPC*QAPSPG
Trigger: TCCAGGACTGGGGGCCTGGCAGCATGGCCCACGTCT...CTCCTGCAGGCAGCCAGGCCACAAGACCCTTGTGGTCCCACCCCACACACGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TGGGCCCAGGTTGGTGGGGAGCAGAACTCTGCCACGTGGCGGCAGTGGAGACGGCAGAACTCTGCCACGTaGCGGCAGTGGAGACGGGAG +
Preference number: 4 (lower is better)
Translates to: WAQVGGEQNSATWRQWRRQNSAT*RQWRRE
Trigger: CTCCCGTCTCCACTGCCGCCACGTGGCAGAGTTCTG...CCGTCTCCACTGCCGCCACGTGGCAGAGTTCTGCTCCCCACCAACCTGGGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564948.1
CDS-3UTR CCA 90 bp ACCACAGACTCGTCCATTCCCCCGGCGGCAGGGGTGGTCCTGGGCTTCACCTCGCTGGGCCCAGGTTGGTaGGGAGCAGAACTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: TTDSSIPPAAGVVLGFTSLGPGW*GAELCH
Trigger: GTGGCAGAGTTCTGCTCCCCACCAACCTGGGCCCAG...CGAGGTGAAGCCCAGGACCACCCCTGCCGCCGGGGGAATGGACGAGTCTGTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564948.1
CDS-3UTR CCA 90 bp CCATGGAAGGGGGACCAACTGGCCCCAGCGGCTTCCTCACAAAGGAGGCAGGGCGGCATCCGTGTGCGCTaGCACGGGACCCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: PWKGDQLAPAASSQRRQGGIRVR*HGTHLL
Trigger: GAGGAGATGGGTCCCGTGCCAGCGCACACGGATGCC...GCCCTGCCTCCTTTGTGAGGAAGCCGCTGGGGCCAGTTGGTCCCCCTTCCATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp CCATGGAAGGGGGACCAACTGGCCCCAGCGGCTTCCTCACAAAGGAGGCAGGGCCTCAGGCCAGGCCCTTaGGTGGGGGTGGGTATGAGG +
Preference number: 4 (lower is better)
Translates to: PWKGDQLAPAASSQRRQGLRPGP*VGVGMR
Trigger: CCTCATACCCACCCCCACCCAAGGGCCTGGCCTGAG...GCCCTGCCTCCTTTGTGAGGAAGCCGCTGGGGCCAGTTGGTCCCCCTTCCATGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp CTGCCACGTGGCGGCAGTGGAGACGGGAGGCACTCGGAAAAGCTCCGTGCCCACGCTGCATCGCGTCCTTaGCCCATTGCTCCTTCGGGT +
Preference number: 4 (lower is better)
Translates to: LPRGGSGDGRHSEKLRAHAASRP*PIAPSG
Trigger: ACCCGAAGGAGCAATGGGTCAAGGACGCGATGCAGC...GTGGGCACGGAGCTTTTCCGAGTGCCTCCCGTCTCCACTGCCGCCACGTGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564948.1
CDS-3UTR TCA 90 bp AGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACCAGGGACCAGGGGTCCAGCTGCCTaGAGCCACTGGCTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: RRQGSGTIQGRGELPPGTRGPAA*SHWLPA
Trigger: AGCAGGGAGCCAGTGGCTTCAGGCAGCTGGACCCCT...GGTCCCTGGTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp GGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGAGAAGGGCCGCAGGTGGCCGGGGTaGCTGGCAACTGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: GALLVRTVRLHPGAGEKGRRWPG*LATAAG
Trigger: TCCTGCTGCAGTTGCCAGTCACCCCGGCCACCTGCG...GCCCTTCTCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp CCTCAGGTAGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACCTCCCTCTTAGCGGGTaGTGGGAGGCAGAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: PQVDGKGRGQSKGEVSCHLPLSG*WEAEPG
Trigger: CCCGGGCTCTGCCTCCCATCACCCGCTAAGAGGGAG...GTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCTACCTGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp CCCGGCGGCAGGGGTGGTCCTGGGCTTCACCTCGCCGATCTGCTTCTCGAAGGTTCGGCTCCAGGCTACTaGTTTCGCCTGTGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: PGGRGGPGLHLADLLLEGSAPGY*FRLWLR
Trigger: CCGAAGCCACAGGCGAAAGCAGTAGCCTGGAGCCGA...ACCTTCGAGAAGCAGATCGGCGAGGTGAAGCCCAGGACCACCCCTGCCGCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564948.1
CDS-3UTR GCA 90 bp TGGGCCCAGGTTGGTGGGGAGCAGAACTCTGCCACGTGGCGGCAGTGGAGACGGCTCGGAAAAGCTCCGTaGCCACAGGCCCTCCATCCT +
Preference number: 4 (lower is better)
Translates to: WAQVGGEQNSATWRQWRRLGKAP*PQALHP
Trigger: AGGATGGAGGGCCTGTGGGCACGGAGCTTTTCCGAG...CCGTCTCCACTGCCGCCACGTGGCAGAGTTCTGCTCCCCACCAACCTGGGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564948.1
CDS-3UTR GCA 90 bp TGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGGCCTGGCTGCCTGCAGGAGTGGGGAGCAGAACTCTaGCACGTGGCGGCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: WRVWGGTTRVLWPGCLQEWGAEL*HVAAVE
Trigger: CTCCACTGCCGCCACGTGGCAGAGTTCTGCTCCCCA...CTCCTGCAGGCAGCCAGGCCACAAGACCCTTGTGGTCCCACCCCACACACGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp AGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTAGCAGCCCCACCGCCTaGCTCCGGGTGGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: SPASGKNLACVGWDHKGLSSPTA*LRVAAW
Trigger: CCAGGCTGCCACCCGGAGGCAGGCGGTGGGGCTGCT...AAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp GCCAGGCCAGCCGGTGCAGCCCCATCCAGGCATGCTCGAGCCTTCAGCAGCCAACTCCGCCATCTCTCCTaGCATCTTTCGAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: ARPAGAAPSRHARAFSSQLRHLS*HLSRAA
Trigger: GGCTGCCCTCGAAAGATGGCAGGAGAGATGGCGGAG...TTGGCTGCTGAAGGCTCGAGCATGCCTGGATGGGGCTGCACCGGCTGGCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp GCCAGGCCAGCCGGTGCAGCCCCATCCAGGCATGCTCGAGCCTTCAGCAGCCAAAGCCCCATCCAGGCATaGTCGAGCCTTCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: ARPAGAAPSRHARAFSSQSPIQA*SSLQQP
Trigger: TGGCTGCTGAAGGCTCGAGCATGCCTGGATGGGGCT...TTGGCTGCTGAAGGCTCGAGCATGCCTGGATGGGGCTGCACCGGCTGGCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp CCATGGAAGGGGGACCAACTGGCCCCAGCGGCTTCCTCACAAAGGAGGCAGGGCGGCTTCCCAACCCCGTaGCAGATTGTCCCGGCCACA +
Preference number: 4 (lower is better)
Translates to: PWKGDQLAPAASSQRRQGGFPTP*QIVPAT
Trigger: TGTGGCCGGGACAATCTGGCACGGGGTTGGGAAGCC...GCCCTGCCTCCTTTGTGAGGAAGCCGCTGGGGCCAGTTGGTCCCCCTTCCATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR CCA 90 bp TCCCTGAGGAACCAGTCACGCCCGTCGGCAGCTCTGGGGAGGTCCCCAGGGCCCGAGATATCGGAGCCATaGCTGAGGGTGGGCAAGAGT +
Preference number: 4 (lower is better)
Translates to: SLRNQSRPSAALGRSPGPEISEP*LRVGKS
Trigger: ACTCTTGCCCACCCTCAGCCATGGCTCCGATATCTC...GGGCCCTGGGGACCTCCCCAGAGCTGCCGACGGGCGTGACTGGTTCCTCAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564948.1
CDS-3UTR CCA 90 bp TCCAGGACCACAGACTCGTCCATTCCCCCGGCGGCAGGGGTGGTCCTGGGCTTCGTTAGGGCAGCAGCCTaGCGGTCCAGATGCTGCATC +
Preference number: 4 (lower is better)
Translates to: SRTTDSSIPPAAGVVLGFVRAAA*RSRCCI
Trigger: GATGCAGCATCTGGACCGCCAGGCTGCTGCCCTAAC...GAAGCCCAGGACCACCCCTGCCGCCGGGGGAATGGACGAGTCTGTGGTCCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564948.1
CDS-3UTR CCA 90 bp AGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTCCCCGGCGGCAGGGGTaGTCCTGGGCTTCACCTCGC +
Preference number: 4 (lower is better)
Translates to: SPASGKNLACVGWDHKGLPRRQG*SWASPR
Trigger: GCGAGGTGAAGCCCAGGACCACCCCTGCCGCCGGGG...AAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp CAGGCCCTGAGCTTCCTGAATATGCTGCGCCACACCCAGCAGGGGAGTGCAGAGGCCACGTGGCGGCAGTaGAGACGGGAGGCACTCGGA +
Preference number: 4 (lower is better)
Translates to: QALSFLNMLRHTQQGSAEATWRQ*RREALG
Trigger: TCCGAGTGCCTCCCGTCTCCACTGCCGCCACGTGGC...CTCTGCACTCCCCTGCTGGGTGTGGCGCAGCATATTCAGGAAGCTCAGGGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGGCCTGGCTGCCTGCAGGAGCAGAACTCTGCCACGTaGCGGCAGTGGAGACGGGAG +
Preference number: 4 (lower is better)
Translates to: WRVWGGTTRVLWPGCLQEQNSAT*RQWRRE
Trigger: CTCCCGTCTCCACTGCCGCCACGTGGCAGAGTTCTG...CTCCTGCAGGCAGCCAGGCCACAAGACCCTTGTGGTCCCACCCCACACACGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp CAGGCCCTGAGCTTCCTGAATATGCTGCGCCACACCCAGCAGGGGAGTGCAGAGTGGGTGGAGGGGTCCTaGGTGGACGGGGCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: QALSFLNMLRHTQQGSAEWVEGS*VDGASE
Trigger: CTCTGAGGCCCCGTCCACCCAGGACCCCTCCACCCA...CTCTGCACTCCCCTGCTGGGTGTGGCGCAGCATATTCAGGAAGCTCAGGGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp CAGGCCCTGAGCTTCCTGAATATGCTGCGCCACACCCAGCAGGGGAGTGCAGAGCTCCGGGTGGCAGCCTaGGCGTCAGGGACAGGAGTG +
Preference number: 4 (lower is better)
Translates to: QALSFLNMLRHTQQGSAELRVAA*ASGTGV
Trigger: CACTCCTGTCCCTGACGCCCAGGCTGCCACCCGGAG...CTCTGCACTCCCCTGCTGGGTGTGGCGCAGCATATTCAGGAAGCTCAGGGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GCCAGGCCAGCCGGTGCAGCCCCATCCAGGCATGCTCGAGCCTTCAGCAGCCAAACTCACAGGGCAGCATaGGTCAGAAGGGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: ARPAGAAPSRHARAFSSQTHRAA*VRRGWA
Trigger: TGCCCAGCCCCTTCTGACCCATGCTGCCCTGTGAGT...TTGGCTGCTGAAGGCTCGAGCATGCCTGGATGGGGCTGCACCGGCTGGCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp CCATGGAAGGGGGACCAACTGGCCCCAGCGGCTTCCTCACAAAGGAGGCAGGGCCCCCCAGGGCATCCCTaGGCTCCACCAGAACACGAA +
Preference number: 4 (lower is better)
Translates to: PWKGDQLAPAASSQRRQGPPGHP*APPEHE
Trigger: TTCGTGTTCTGGTGGAGCCCAGGGATGCCCTGGGGG...GCCCTGCCTCCTTTGTGAGGAAGCCGCTGGGGCCAGTTGGTCCCCCTTCCATGG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR CCA 90 bp CAAGGCTGGCCTCCTGGGGAATGCCTGGGAGCTTGGAGCTTGTGCACCTGGAGGTCCCCACCGGGCCTGTaGCCTTGCCTATCCCCTCAC +
Preference number: 4 (lower is better)
Translates to: QGWPPGECLGAWSLCTWRSPPGL*PCLSPH
Trigger: GTGAGGGGATAGGCAAGGCCACAGGCCCGGTGGGGA...CCTCCAGGTGCACAAGCTCCAAGCTCCCAGGCATTCCCCAGGAGGCCAGCCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000565912.1
3UTR CAA 72 bp TGGTCAAGGCTGGCCTCCTGGGGAATGCCTGGGAGCTaGGAGCTTGTGCACCTGGAGGATCCCACCTCCCCC +
Preference number: 4 (lower is better)
Translates to: WSRLASWGMPGS*ELVHLEDPTSP
Trigger: GGGGGAGGTGGGATCCTCCAGGTGCACAAGCTCCAAGCTCCCAGGCATTCCCCAGGAGGCCAGCCTTGACCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp CCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGCCCGGGCTGTCTCAGTaGCTAAGCCTGGGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: PASGKNLACVGWDHKGLVPGLSQ*LSLGGA
Trigger: GGCCCCGCCCAGGCTTAGTCACTGAGACAGCCCGGG...CACAAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp GCCAGGCCAGCCGGTGCAGCCCCATCCAGGCATGCTCGAGCCTTCAGCAGCCAACCGGCAGGTCTGGGTTaGGTCATCAAGGAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: ARPAGAAPSRHARAFSSQPAGLG*VIKEKH
Trigger: GTGCTTCTCCTTGATGACTCAACCCAGACCTGCCGG...TTGGCTGCTGAAGGCTCGAGCATGCCTGGATGGGGCTGCACCGGCTGGCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR GCA 90 bp TGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGGCCTGGCTGCCTGCAGGAGGCGTCCTTGACCCATTaGTCCTTCGGGTCGGCACAG +
Preference number: 4 (lower is better)
Translates to: WRVWGGTTRVLWPGCLQEASLTH*SFGSAQ
Trigger: CTGTGCCGACCCGAAGGAGCAATGGGTCAAGGACGC...CTCCTGCAGGCAGCCAGGCCACAAGACCCTTGTGGTCCCACCCCACACACGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp AGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACCAGGGACCGCCTGGCGGTCCAGATaGTGCATCGCGTCCTTGACC +
Preference number: 4 (lower is better)
Translates to: RRQGSGTIQGRGELPPGTAWRSR*CIASLT
Trigger: GGTCAAGGACGCGATGCAGCATCTGGACCGCCAGGC...GGTCCCTGGTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp CCATGGAAGGGGGACCAACTGGCCCCAGCGGCTTCCTCACAAAGGAGGCAGGGCTCAGATGGCAGAAGGTaGCCAAGCGGAGCAGCCACG +
Preference number: 4 (lower is better)
Translates to: PWKGDQLAPAASSQRRQGSDGRR*PSGAAT
Trigger: CGTGGCTGCTCCGCTTGGCCACCTTCTGCCATCTGA...GCCCTGCCTCCTTTGTGAGGAAGCCGCTGGGGCCAGTTGGTCCCCCTTCCATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000006053.7
ENST00000563383.1
CDS-3UTR CCA 90 bp CAGGCCCTGAGCTTCCTGAATATGCTGCGCCACACCCAGCAGGGGAGTGCAGAGCGGCAGGGGTGGTCCTaGGCTTCACCTCGCCGATCT +
Preference number: 4 (lower is better)
Translates to: QALSFLNMLRHTQQGSAERQGWS*ASPRRS
Trigger: AGATCGGCGAGGTGAAGCCCAGGACCACCCCTGCCG...CTCTGCACTCCCCTGCTGGGTGTGGCGCAGCATATTCAGGAAGCTCAGGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp AGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACCAGGGACCCAGAACTCTGCCACGTaGCGGCAGTGGAGACGGGAG +
Preference number: 4 (lower is better)
Translates to: RRQGSGTIQGRGELPPGTQNSAT*RQWRRE
Trigger: CTCCCGTCTCCACTGCCGCCACGTGGCAGAGTTCTG...GGTCCCTGGTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GGGAGCAGAACTCTGCCACGTGGCGGCAGTGGAGACGGGAGGCACTCGGAAAAGAGGCTGGGCCCAGGTTaGTGGGGAGCAGAACTCTGC +
Preference number: 4 (lower is better)
Translates to: GSRTLPRGGSGDGRHSEKRLGPG*WGAELC
Trigger: GCAGAGTTCTGCTCCCCACCAACCTGGGCCCAGCCT...CTTTTCCGAGTGCCTCCCGTCTCCACTGCCGCCACGTGGCAGAGTTCTGCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564948.1
CDS-3UTR CCA 90 bp AGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACCAGGGACCATTCTCCTCTGGGGCTaGGGAGGACGCAGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: RRQGSGTIQGRGELPPGTILLWG*GGRSGG
Trigger: GCCTCCACTGCGTCCTCCCCAGCCCCAGAGGAGAAT...GGTCCCTGGTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GGGAGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTGGCATCCGTGTGCGCTaGCACGGGACCCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: GSPASGKNLACVGWDHKGGIRVR*HGTHLL
Trigger: GAGGAGATGGGTCCCGTGCCAGCGCACACGGATGCC...ACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GCCAGGCCAGCCGGTGCAGCCCCATCCAGGCATGCTCGAGCCTTCAGCAGCCAATCTGGGGGTCCATGGTaGCATGGATGGGTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: ARPAGAAPSRHARAFSSQSGGPW*HGWVPQ
Trigger: CTGAGGAACCCATCCATGCCACCATGGACCCCCAGA...TTGGCTGCTGAAGGCTCGAGCATGCCTGGATGGGGCTGCACCGGCTGGCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp CCATGGAAGGGGGACCAACTGGCCCCAGCGGCTTCCTCACAAAGGAGGCAGGGCGCCTCTGGGGGTCCATaGTGGCATGGATGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: PWKGDQLAPAASSQRRQGASGGP*WHGWVP
Trigger: AGGAACCCATCCATGCCACCATGGACCCCCAGAGGC...GCCCTGCCTCCTTTGTGAGGAAGCCGCTGGGGCCAGTTGGTCCCCCTTCCATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp ACCCAGCCCATAAGAGGCCCCTCAGGTAGACGGCAAGGGTCGGGGACAATCCAACTCCGGGTGGCAGCCTaGGCGTCAGGGACAGGAGTG +
Preference number: 4 (lower is better)
Translates to: TQPIRGPSGRRQGSGTIQLRVAA*ASGTGV
Trigger: CACTCCTGTCCCTGACGCCCAGGCTGCCACCCGGAG...TTGGATTGTCCCCGACCCTTGCCGTCTACCTGAGGGGCCTCTTATGGGCTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp CCTCAGGTAGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACCTCAGGCCAGGCCCTTaGGTGGGGGTGGGTATGAGG +
Preference number: 4 (lower is better)
Translates to: PQVDGKGRGQSKGEVSCHLRPGP*VGVGMR
Trigger: CCTCATACCCACCCCCACCCAAGGGCCTGGCCTGAG...GTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCTACCTGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GGGAGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTGGAAGGGGGACCAACTaGCCCCAGCGGCTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: GSPASGKNLACVGWDHKGGRGTN*PQRLPH
Trigger: GTGAGGAAGCCGCTGGGGCCAGTTGGTCCCCCTTCC...ACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp CCTCAGGTAGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACGGAAGGGGGACCAACTaGCCCCAGCGGCTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: PQVDGKGRGQSKGEVSCHGRGTN*PQRLPH
Trigger: GTGAGGAAGCCGCTGGGGCCAGTTGGTCCCCCTTCC...GTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCTACCTGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp AGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACCAGGGACCGCCACGGTCCCTGAATaGTCCTGGCCCGGCTCAGTT +
Preference number: 4 (lower is better)
Translates to: RRQGSGTIQGRGELPPGTATVPE*SWPGSV
Trigger: AACTGAGCCGGGCCAGGACCATTCAGGGACCGTGGC...GGTCCCTGGTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR CCA 90 bp CAAGGCTGGCCTCCTGGGGAATGCCTGGGAGCTTGGAGCTTGTGCACCTGGAGGCCAGGCCCTATTGAGTaGAGCCAGGTGGCAGTCCCC +
Preference number: 4 (lower is better)
Translates to: QGWPPGECLGAWSLCTWRPGPIE*SQVAVP
Trigger: GGGGACTGCCACCTGGCTCCACTCAATAGGGCCTGG...CCTCCAGGTGCACAAGCTCCAAGCTCCCAGGCATTCCCCAGGAGGCCAGCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR TCA 90 bp CAGGCCCTGAGCTTCCTGAATATGCTGCGCCACACCCAGCAGGGGAGTGCAGAGGCTGGGGGTCCCTTCTaGGGAGACAGGGACCACAGA +
Preference number: 4 (lower is better)
Translates to: QALSFLNMLRHTQQGSAEAGGPF*GDRDHR
Trigger: TCTGTGGTCCCTGTCTCCTCAGAAGGGACCCCCAGC...CTCTGCACTCCCCTGCTGGGTGTGGCGCAGCATATTCAGGAAGCTCAGGGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp TGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGGCCTGGCTGCCTGCAGGAGCACACAGCCAGCAAGTaGTGGAGCAGGTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: WRVWGGTTRVLWPGCLQEHTASK*WSRFSC
Trigger: GCAGGAGAACCTGCTCCATCACTTGCTGGCTGTGTG...CTCCTGCAGGCAGCCAGGCCACAAGACCCTTGTGGTCCCACCCCACACACGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR TCA 90 bp GGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGAGAAGGGCACTCCCGACCTCAGGTaGTCTGCCCTCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: GALLVRTVRLHPGAGEKGTPDLR*SALLGL
Trigger: GAGGCCAAGGAGGGCAGATCACCTGAGGTCGGGAGT...GCCCTTCTCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR GCA 90 bp GGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGAGAAGGGCGCCTGGCGGTCCAGATaGTGCATCGCGTCCTTGACC +
Preference number: 4 (lower is better)
Translates to: GALLVRTVRLHPGAGEKGAWRSR*CIASLT
Trigger: GGTCAAGGACGCGATGCAGCATCTGGACCGCCAGGC...GCCCTTCTCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp AGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACCAGGGACCCTCGGAAAAGCTCCGTaGCCACAGGCCCTCCATCCT +
Preference number: 4 (lower is better)
Translates to: RRQGSGTIQGRGELPPGTLGKAP*PQALHP
Trigger: AGGATGGAGGGCCTGTGGGCACGGAGCTTTTCCGAG...GGTCCCTGGTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp AGGGAGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTGGAAGGCATCCGTGTaGGCTGGCACGGGACCCATC +
Preference number: 4 (lower is better)
Translates to: REPSLRKESGVCGVGPQGWKASV*AGTGPI
Trigger: GATGGGTCCCGTGCCAGCGCACACGGATGCCTTCCA...CCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp CAGGCCCTGAGCTTCCTGAATATGCTGCGCCACACCCAGCAGGGGAGTGCAGAGTGGAAGGCATCCGTGTaGGCTGGCACGGGACCCATC +
Preference number: 4 (lower is better)
Translates to: QALSFLNMLRHTQQGSAEWKASV*AGTGPI
Trigger: GATGGGTCCCGTGCCAGCGCACACGGATGCCTTCCA...CTCTGCACTCCCCTGCTGGGTGTGGCGCAGCATATTCAGGAAGCTCAGGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp ACCCAGCCCATAAGAGGCCCCTCAGGTAGACGGCAAGGGTCGGGGACAATCCAACAGAGACGTGGGCCATaGTGCCAGGCCCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: TQPIRGPSGRRQGSGTIQQRRGP*CQAPSP
Trigger: AGGACTGGGGGCCTGGCAGCATGGCCCACGTCTCTG...TTGGATTGTCCCCGACCCTTGCCGTCTACCTGAGGGGCCTCTTATGGGCTGGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp GCCAGGCCAGCCGGTGCAGCCCCATCCAGGCATGCTCGAGCCTTCAGCAGCCAAGGCAGCACAGCGTCTTaGTCTCTATGGACCAGAGCT +
Preference number: 4 (lower is better)
Translates to: ARPAGAAPSRHARAFSSQGSTAS*SLWTRA
Trigger: AGCTCTGGTCCATAGAGAGCAAGACGCTGTGCTGCC...TTGGCTGCTGAAGGCTCGAGCATGCCTGGATGGGGCTGCACCGGCTGGCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp GCGGCAGTGGAGACGGGAGGCACTCGGAAAAGCTCCGTGCCCACAGGCCCTCCAGCACAGAACAGCCTGTaGTGTCTCGTCTCCAAGCAG +
Preference number: 4 (lower is better)
Translates to: AAVETGGTRKSSVPTGPPAQNSL*CLVSKQ
Trigger: CTGCTTGGAGACGAGACAGCACAGGCTGTTCTGTGC...TGGAGGGCCTGTGGGCACGGAGCTTTTCCGAGTGCCTCCCGTCTCCACTGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564948.1
CDS-3UTR CCA 90 bp AGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACCAGGGACCTCAGATGGCAGAAGGTaGCCAAGCGGAGCAGCCACG +
Preference number: 4 (lower is better)
Translates to: RRQGSGTIQGRGELPPGTSDGRR*PSGAAT
Trigger: CGTGGCTGCTCCGCTTGGCCACCTTCTGCCATCTGA...GGTCCCTGGTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006053.7
ENST00000563383.1
CDS-3UTR CCA 90 bp CCTCAGGTAGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACCGGAGCATTCTCCTCTaGGGCTGGGGAGGACGCAGT +
Preference number: 4 (lower is better)
Translates to: PQVDGKGRGQSKGEVSCHRSILL*GWGGRS
Trigger: ACTGCGTCCTCCCCAGCCCCAGAGGAGAATGCTCCG...GTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCTACCTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GGGAGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCCACTGGCTCCCTGCTaGGGGTCCCTTCTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: GSPASGKNLACVGWDHKGPLAPC*GSLLRR
Trigger: TCTCCTCAGAAGGGACCCCCAGCAGGGAGCCAGTGG...ACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGAGAAGGGCCCACTGGCTCCCTGCTaGGGGTCCCTTCTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: GALLVRTVRLHPGAGEKGPLAPC*GSLLRR
Trigger: TCTCCTCAGAAGGGACCCCCAGCAGGGAGCCAGTGG...GCCCTTCTCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp CCATGGAAGGGGGACCAACTGGCCCCAGCGGCTTCCTCACAAAGGAGGCAGGGCCTCCTGGGGAATGCCTaGGAGCTTGGAGCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: PWKGDQLAPAASSQRRQGLLGNA*ELGACA
Trigger: TGCACAAGCTCCAAGCTCCCAGGCATTCCCCAGGAG...GCCCTGCCTCCTTTGTGAGGAAGCCGCTGGGGCCAGTTGGTCCCCCTTCCATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp CAAGGCTGGCCTCCTGGGGAATGCCTGGGAGCTTGGAGCTTGTGCACCTGGAGGCTGGCAGGTGGAGAATaGTCAAGGCTGGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: QGWPPGECLGAWSLCTWRLAGGE*SRLASW
Trigger: CCAGGAGGCCAGCCTTGACCATTCTCCACCTGCCAG...CCTCCAGGTGCACAAGCTCCAAGCTCCCAGGCATTCCCCAGGAGGCCAGCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp CAGGCCCTGAGCTTCCTGAATATGCTGCGCCACACCCAGCAGGGGAGTGCAGAGCCCTTGCAGGCCCTCTaGGCCTCAGGGTCCAAAGAC +
Preference number: 4 (lower is better)
Translates to: QALSFLNMLRHTQQGSAEPLQAL*ASGSKD
Trigger: GTCTTTGGACCCTGAGGCCCAGAGGGCCTGCAAGGG...CTCTGCACTCCCCTGCTGGGTGTGGCGCAGCATATTCAGGAAGCTCAGGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGGCCTGGCTGCCTGCAGGAGAAGGGTCTTGTGGCCTaGCTGCCTGCAGGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: WRVWGGTTRVLWPGCLQEKGLVA*LPAGVS
Trigger: AGAGACTCCTGCAGGCAGCCAGGCCACAAGACCCTT...CTCCTGCAGGCAGCCAGGCCACAAGACCCTTGTGGTCCCACCCCACACACGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp CCATGGAAGGGGGACCAACTGGCCCCAGCGGCTTCCTCACAAAGGAGGCAGGGCAAGGGTCTTGTGGCCTaGCTGCCTGCAGGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: PWKGDQLAPAASSQRRQGKGLVA*LPAGVS
Trigger: AGAGACTCCTGCAGGCAGCCAGGCCACAAGACCCTT...GCCCTGCCTCCTTTGTGAGGAAGCCGCTGGGGCCAGTTGGTCCCCCTTCCATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GCCAGGCCAGCCGGTGCAGCCCCATCCAGGCATGCTCGAGCCTTCAGCAGCCAAAGTCACTGTGTGGGCTaGCCACCCTCCTTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: ARPAGAAPSRHARAFSSQSHCVG*PPSFCN
Trigger: ATTGCAGAAGGAGGGTGGCCAGCCCACACAGTGACT...TTGGCTGCTGAAGGCTCGAGCATGCCTGGATGGGGCTGCACCGGCTGGCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR CCA 90 bp CCATGGAAGGGGGACCAACTGGCCCCAGCGGCTTCCTCACAAAGGAGGCAGGGCCAGGCTGGAGTGCAATaGCATGATCTCGGCTCACCG +
Preference number: 4 (lower is better)
Translates to: PWKGDQLAPAASSQRRQGQAGVQ*HDLGSP
Trigger: CGGTGAGCCGAGATCATGCCATTGCACTCCAGCCTG...GCCCTGCCTCCTTTGTGAGGAAGCCGCTGGGGCCAGTTGGTCCCCCTTCCATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR TCA 90 bp ACCCAGCCCATAAGAGGCCCCTCAGGTAGACGGCAAGGGTCGGGGACAATCCAATATCGGAGCCATGGCTaGGGGTGGGCAAGAGTCCCG +
Preference number: 4 (lower is better)
Translates to: TQPIRGPSGRRQGSGTIQYRSHG*GWARVP
Trigger: CGGGACTCTTGCCCACCCTCAGCCATGGCTCCGATA...TTGGATTGTCCCCGACCCTTGCCGTCTACCTGAGGGGCCTCTTATGGGCTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000006053.7
ENST00000563383.1
CDS-3UTR TCA 90 bp GCCAGGCCAGCCGGTGCAGCCCCATCCAGGCATGCTCGAGCCTTCAGCAGCCAATGCGCGTTTGCCGCATaGTGCCTGGTTCTGTTGATA +
Preference number: 4 (lower is better)
Translates to: ARPAGAAPSRHARAFSSQCAFAA*CLVLLI
Trigger: TATCAACAGAACCAGGCATCATGCGGCAAACGCGCA...TTGGCTGCTGAAGGCTCGAGCATGCCTGGATGGGGCTGCACCGGCTGGCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp GGGAGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTGCTGCATCGCGTCCTTaGCCCATTGCTCCTTCGGGT +
Preference number: 4 (lower is better)
Translates to: GSPASGKNLACVGWDHKGAASRP*PIAPSG
Trigger: ACCCGAAGGAGCAATGGGTCAAGGACGCGATGCAGC...ACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp GGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGAGAAGGGCGCTGCATCGCGTCCTTaGCCCATTGCTCCTTCGGGT +
Preference number: 4 (lower is better)
Translates to: GALLVRTVRLHPGAGEKGAASRP*PIAPSG
Trigger: ACCCGAAGGAGCAATGGGTCAAGGACGCGATGCAGC...GCCCTTCTCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp AGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTAGGGGTCCAGCTGCCTaGAGCCACTGGCTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: SPASGKNLACVGWDHKGLRGPAA*SHWLPA
Trigger: AGCAGGGAGCCAGTGGCTTCAGGCAGCTGGACCCCT...AAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp GCCAGGCCAGCCGGTGCAGCCCCATCCAGGCATGCTCGAGCCTTCAGCAGCCAAGGGCACCAGGACATATaGATTACTACCACAGCTCCG +
Preference number: 4 (lower is better)
Translates to: ARPAGAAPSRHARAFSSQGHQDI*ITTTAP
Trigger: CGGAGCTGTGGTAGTAATTCATATGTCCTGGTGCCC...TTGGCTGCTGAAGGCTCGAGCATGCCTGGATGGGGCTGCACCGGCTGGCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp TGTGTGAGATGGGAGGACTGTAGTACTCACAGGGCAGCATGGGTCAGAAGGGGCCGCAGGTGGCCGGGGTaGCTGGCAACTGCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: CVRWEDCSTHRAAWVRRGRRWPG*LATAAG
Trigger: TCCTGCTGCAGTTGCCAGTCACCCCGGCCACCTGCG...GCCCCTTCTGACCCATGCTGCCCTGTGAGTACTACAGTCCTCCCATCTCACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp CAAGGCTGGCCTCCTGGGGAATGCCTGGGAGCTTGGAGCTTGTGCACCTGGAGGAGGGCCTCAGGTCAATaGGTGTTGTCAGGGGGACAG +
Preference number: 4 (lower is better)
Translates to: QGWPPGECLGAWSLCTWRRASGQ*VLSGGQ
Trigger: CTGTCCCCCTGACAACACTCATTGACCTGAGGCCCT...CCTCCAGGTGCACAAGCTCCAAGCTCCCAGGCATTCCCCAGGAGGCCAGCCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp TGTCTAAGGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGACTCCCTCTTAGCGGGTaGTGGGAGGCAGAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: CLRCSAGKDCEAASRGWRLPLSG*WEAEPG
Trigger: CCCGGGCTCTGCCTCCCATCACCCGCTAAGAGGGAG...TCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACCTTAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp CAAGGCTGGCCTCCTGGGGAATGCCTGGGAGCTTGGAGCTTGTGCACCTGGAGGCGGTGGGGACAAAGGTaGAGGAGAAGGTCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: QGWPPGECLGAWSLCTWRRWGQR*RRRSWR
Trigger: CCTCCAAGACCTTCTCCTTCACCTTTGTCCCCACCG...CCTCCAGGTGCACAAGCTCCAAGCTCCCAGGCATTCCCCAGGAGGCCAGCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp AGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACCAGGGACCTGGCGGTCCAGATGCTaGATCGCGTCCTTGACCCAT +
Preference number: 4 (lower is better)
Translates to: RRQGSGTIQGRGELPPGTWRSRC*IASLTH
Trigger: ATGGGTCAAGGACGCGATGCAGCATCTGGACCGCCA...GGTCCCTGGTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp TGGCGGCAGTGGAGACGGGAGGCACTCGGAAAAGCTCCGTGCCCACAGGCCCTCTCTGCTTCTCGAAGGTaGCGCCATTTCGAGTTAGGG +
Preference number: 4 (lower is better)
Translates to: WRQWRREALGKAPCPQALSASRR*RHFELG
Trigger: CCCTAACTCGAAATGGCGGCACCTTCGAGAAGCAGA...GAGGGCCTGTGGGCACGGAGCTTTTCCGAGTGCCTCCCGTCTCCACTGCCGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564948.1
CDS-3UTR GCA 90 bp AGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACCAGGGACCTTCACCTCGCCGATCTaGTTCTCGAAGGTGCCGCCA +
Preference number: 4 (lower is better)
Translates to: RRQGSGTIQGRGELPPGTFTSPI*FSKVPP
Trigger: TGGCGGCACCTTCGAGAAGCAGATCGGCGAGGTGAA...GGTCCCTGGTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp GGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGAGAAGGGCTCGGCTCCAGGCTACTaGTTTCGCCTGTGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: GALLVRTVRLHPGAGEKGSAPGY*FRLWLR
Trigger: CCGAAGCCACAGGCGAAAGCAGTAGCCTGGAGCCGA...GCCCTTCTCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp AGGGAGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCGGCTCCAGGCTACTaGTTTCGCCTGTGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: REPSLRKESGVCGVGPQGSAPGY*FRLWLR
Trigger: CCGAAGCCACAGGCGAAAGCAGTAGCCTGGAGCCGA...CCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp AAGAAGGAGTCGGCTCCAGGCTACTGCTTTCGCCTGTGGCTTCGGGCTCCAGGATGGGGAGCAGAACTCTaGCACGTGGCGGCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: KKESAPGYCFRLWLRAPGWGAEL*HVAAVE
Trigger: CTCCACTGCCGCCACGTGGCAGAGTTCTGCTCCCCA...TCCTGGAGCCCGAAGCCACAGGCGAAAGCAGTAGCCTGGAGCCGACTCCTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564948.1
CDS-3UTR GCA 90 bp ACCCAGCCCATAAGAGGCCCCTCAGGTAGACGGCAAGGGTCGGGGACAATCCAAGGCCTCAGAGGTCTTTaGCTCAGCCCAGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: TQPIRGPSGRRQGSGTIQGLRGL*LSPEAG
Trigger: CCCAGCCTCTGGGCTGAGGCAAAGACCTCTGAGGCC...TTGGATTGTCCCCGACCCTTGCCGTCTACCTGAGGGGCCTCTTATGGGCTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp CCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGAGACGTGGGCCATGCTaGCAGGCCCCCAGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: PASGKNLACVGWDHKGLVRRGPC*QAPSPG
Trigger: TCCAGGACTGGGGGCCTGGCAGCATGGCCCACGTCT...CACAAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp GGGAGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTTGGCCTCCTGGGGAATaGCTGGGAGCTTGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: GSPASGKNLACVGWDHKGWPPGE*LGAWSL
Trigger: CAAGCTCCAAGCTCCCAGGCATTCCCCAGGAGGCCA...ACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp CAAGGCTGGCCTCCTGGGGAATGCCTGGGAGCTTGGAGCTTGTGCACCTGGAGGGAGACACAATCAGGTTaGAGGGAGTGGGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: QGWPPGECLGAWSLCTWRETQSG*REWAEG
Trigger: GCCCTCTGCCCACTCCCTGCAACCTGATTGTGTCTC...CCTCCAGGTGCACAAGCTCCAAGCTCCCAGGCATTCCCCAGGAGGCCAGCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp CCATGGAAGGGGGACCAACTGGCCCCAGCGGCTTCCTCACAAAGGAGGCAGGGCGGATGGTCTCTGCTCTaGCCATTTCCATTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: PWKGDQLAPAASSQRRQGGWSLL*PFPFGG
Trigger: GCCCCCAAATGGAAATGGGCAGAGCAGAGACCATCC...GCCCTGCCTCCTTTGTGAGGAAGCCGCTGGGGCCAGTTGGTCCCCCTTCCATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp TGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGGCCTGGCTGCCTGCAGGAGCATCAGGAATGTGGCTaGTCCTGGAGCCTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: WRVWGGTTRVLWPGCLQEHQECG*SWSLSW
Trigger: CCAGGAAAGGCTCCAGGAGCAGCCACATTCCTGATG...CTCCTGCAGGCAGCCAGGCCACAAGACCCTTGTGGTCCCACCCCACACACGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp TGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGGCCTGGCTGCCTGCAGGAGGGCAGCACAGCGTCTTaGTCTCTATGGACCAGAGCT +
Preference number: 4 (lower is better)
Translates to: WRVWGGTTRVLWPGCLQEGSTAS*SLWTRA
Trigger: AGCTCTGGTCCATAGAGAGCAAGACGCTGTGCTGCC...CTCCTGCAGGCAGCCAGGCCACAAGACCCTTGTGGTCCCACCCCACACACGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp CCATGGAAGGGGGACCAACTGGCCCCAGCGGCTTCCTCACAAAGGAGGCAGGGCTCAGCCTCCCTCCCCTaGCAAACTTCTCTATGCCTC +
Preference number: 4 (lower is better)
Translates to: PWKGDQLAPAASSQRRQGSASLP*QTSLCL
Trigger: GAGGCATAGAGAAGTTTGGCAGGGGAGGGAGGCTGA...GCCCTGCCTCCTTTGTGAGGAAGCCGCTGGGGCCAGTTGGTCCCCCTTCCATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR CCA 90 bp CCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGCGGCAGGGGTGGTCCTaGGCTTCACCTCGCCGATCT +
Preference number: 4 (lower is better)
Translates to: PASGKNLACVGWDHKGLVRQGWS*ASPRRS
Trigger: AGATCGGCGAGGTGAAGCCCAGGACCACCCCTGCCG...CACAAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp CAGGCCCTGAGCTTCCTGAATATGCTGCGCCACACCCAGCAGGGGAGTGCAGAGGCCCTCTGTGCTTCCTaGGAAGAAGGAGTCGGCTCC +
Preference number: 4 (lower is better)
Translates to: QALSFLNMLRHTQQGSAEALCAS*EEGVGS
Trigger: GGAGCCGACTCCTTCTTCCCAGGAAGCACAGAGGGC...CTCTGCACTCCCCTGCTGGGTGTGGCGCAGCATATTCAGGAAGCTCAGGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TGTCTAAGGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGACCTCAGCCCAGAGGCTaGGCCCAGGTTGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: CLRCSAGKDCEAASRGWRPQPRG*AQVGGE
Trigger: CTCCCCACCAACCTGGGCCCAGCCTCTGGGCTGAGG...TCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACCTTAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp CCTCAGGTAGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACCTCCAGAGAGTTCTCTaGCCTGGGGCTCTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: PQVDGKGRGQSKGEVSCHLQRVL*PGALSL
Trigger: CAGGGACAGAGCCCCAGGCCAGAGAACTCTCTGGAG...GTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCTACCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp AGGGAGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGCTCCAGAGAGTTCTCTaGCCTGGGGCTCTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: REPSLRKESGVCGVGPQGLQRVL*PGALSL
Trigger: CAGGGACAGAGCCCCAGGCCAGAGAACTCTCTGGAG...CCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp AGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGGCATCCGTGTGCGCTaGCACGGGACCCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: SPASGKNLACVGWDHKGLGIRVR*HGTHLL
Trigger: GAGGAGATGGGTCCCGTGCCAGCGCACACGGATGCC...AAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TGTCTAAGGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGAGGGACCACAGAGACGTaGGCCATGCTGCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: CLRCSAGKDCEAASRGWRGTTET*AMLPGP
Trigger: GGGGCCTGGCAGCATGGCCCACGTCTCTGTGGTCCC...TCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACCTTAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGAGAAGGGCGCCTCTGGGGGTCCATaGTGGCATGGATGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: GALLVRTVRLHPGAGEKGASGGP*WHGWVP
Trigger: AGGAACCCATCCATGCCACCATGGACCCCCAGAGGC...GCCCTTCTCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp AGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACCAGGGACCCTCCTGGGGAATGCCTaGGAGCTTGGAGCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: RRQGSGTIQGRGELPPGTLLGNA*ELGACA
Trigger: TGCACAAGCTCCAAGCTCCCAGGCATTCCCCAGGAG...GGTCCCTGGTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGAGAAGGGCGGAGAGTTTTGGGGCTaGGGTGAGTTGGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: GALLVRTVRLHPGAGEKGGEFWG*GELGGH
Trigger: GTGGCCTCCCAACTCACCCCAGCCCCAAAACTCTCC...GCCCTTCTCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp CAGGCCCTGAGCTTCCTGAATATGCTGCGCCACACCCAGCAGGGGAGTGCAGAGACTCACAGGGCAGCATaGGTCAGAAGGGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: QALSFLNMLRHTQQGSAETHRAA*VRRGWA
Trigger: TGCCCAGCCCCTTCTGACCCATGCTGCCCTGTGAGT...CTCTGCACTCCCCTGCTGGGTGTGGCGCAGCATATTCAGGAAGCTCAGGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GGGAGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTTCACCAGTGGGGGCGTaGGCTCTGTACAGAGGATGG +
Preference number: 4 (lower is better)
Translates to: GSPASGKNLACVGWDHKGSPVGA*ALYRGW
Trigger: CCATCCTCTGTACAGAGCCCACGCCCCCACTGGTGA...ACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp CCTCAGGTAGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACTCACCAGTGGGGGCGTaGGCTCTGTACAGAGGATGG +
Preference number: 4 (lower is better)
Translates to: PQVDGKGRGQSKGEVSCHSPVGA*ALYRGW
Trigger: CCATCCTCTGTACAGAGCCCACGCCCCCACTGGTGA...GTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCTACCTGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGGCCTGGCTGCCTGCAGGAGAAGACATGTCACCAGTaGGGGCGTGGGCTCTGTACA +
Preference number: 4 (lower is better)
Translates to: WRVWGGTTRVLWPGCLQEKTCHQ*GRGLCT
Trigger: TGTACAGAGCCCACGCCCCCACTGGTGACATGTCTT...CTCCTGCAGGCAGCCAGGCCACAAGACCCTTGTGGTCCCACCCCACACACGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GCCAGGCCAGCCGGTGCAGCCCCATCCAGGCATGCTCGAGCCTTCAGCAGCCAACTTTCCTGGGCTTCTTaGACATGTGTCTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: ARPAGAAPSRHARAFSSQLSWAS*TCVWSP
Trigger: AGGGCTCCAGACACATGTCCAAGAAGCCCAGGAAAG...TTGGCTGCTGAAGGCTCGAGCATGCCTGGATGGGGCTGCACCGGCTGGCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp CCATGGAAGGGGGACCAACTGGCCCCAGCGGCTTCCTCACAAAGGAGGCAGGGCCATCATGGAAATCCCTaGTCCTGTCTGCGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: PWKGDQLAPAASSQRRQGHHGNP*SCLRWG
Trigger: TCCCCACCGCAGACAGGACCAGGGATTTCCATGATG...GCCCTGCCTCCTTTGTGAGGAAGCCGCTGGGGCCAGTTGGTCCCCCTTCCATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GCCAGGCCAGCCGGTGCAGCCCCATCCAGGCATGCTCGAGCCTTCAGCAGCCAAGCGTCTTGCTCTCTATaGACCAGAGCTGGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: ARPAGAAPSRHARAFSSQASCSL*TRAGFP
Trigger: AGGAAACCCAGCTCTGGTCCATAGAGAGCAAGACGC...TTGGCTGCTGAAGGCTCGAGCATGCCTGGATGGGGCTGCACCGGCTGGCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp AGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTTATCGGAGCCATGGCTaGGGGTGGGCAAGAGTCCCG +
Preference number: 4 (lower is better)
Translates to: SPASGKNLACVGWDHKGLYRSHG*GWARVP
Trigger: CGGGACTCTTGCCCACCCTCAGCCATGGCTCCGATA...AAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000006053.7
ENST00000563383.1
CDS-3UTR TCA 90 bp GTGGGGGTGGGTATGAGGATGAGGGATCCCAGGCAGCTGTCTGAATCAAACAACCTGGGGCTCTGTCCCTaGCCCCACACACGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: VGVGMRMRDPRQLSESNNLGLCP*PHTRWP
Trigger: AGGCCAGCGTGTGTGGGGTCAGGGACAGAGCCCCAG...GTTGTTTGATTCAGACAGCTGCCTGGGATCCCTCATCCTCATACCCACCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp TTGCAGGCCCTCTGGGCCTCAGGGTCCAAAGACAAGTTAGTCCATTGGCAGGGAGGAGGCTCTGGTAGGTaGACATGGCCACCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: LQALWASGSKDKLVHWQGGGSGR*TWPPPG
Trigger: GCCTGGGGGTGGCCATGTTCACCTACCAGAGCCTCC...TCCCTGCCAATGGACTAACTTGTCTTTGGACCCTGAGGCCCAGAGGGCCTGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp CCATGGAAGGGGGACCAACTGGCCCCAGCGGCTTCCTCACAAAGGAGGCAGGGCAGTGTTTTCAAGGAGTaGGAGAGGTGGGAAGGGAGC +
Preference number: 4 (lower is better)
Translates to: PWKGDQLAPAASSQRRQGSVFKE*ERWEGS
Trigger: GCTCCCTTCCCACCTCTCTCACTCCTTGAAAACACT...GCCCTGCCTCCTTTGTGAGGAAGCCGCTGGGGCCAGTTGGTCCCCCTTCCATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp GGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGAGAAGGGCCGGTGGGGACAAAGGTaGAGGAGAAGGTCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: GALLVRTVRLHPGAGEKGRWGQR*RRRSWR
Trigger: CCTCCAAGACCTTCTCCTTCACCTTTGTCCCCACCG...GCCCTTCTCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp TTGCAGGCCCTCTGGGCCTCAGGGTCCAAAGACAAGTTAGTCCATTGGCAGGGATCTGAGCTGCCAGAGTaGCCCCACCTGAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LQALWASGSKDKLVHWQGSELPE*PHLSQA
Trigger: GGCCTGGCTCAGGTGGGGTCACTCTGGCAGCTCAGA...TCCCTGCCAATGGACTAACTTGTCTTTGGACCCTGAGGCCCAGAGGGCCTGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp ACCCAGCCCATAAGAGGCCCCTCAGGTAGACGGCAAGGGTCGGGGACAATCCAAGGGGCAGGCAGTAGCTaGGTGTCACGTGGAACCAGA +
Preference number: 4 (lower is better)
Translates to: TQPIRGPSGRRQGSGTIQGAGSS*VSRGTR
Trigger: TCTGGTTCCACGTGACACTCAGCTACTGCCTGCCCC...TTGGATTGTCCCCGACCCTTGCCGTCTACCTGAGGGGCCTCTTATGGGCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR GCA 90 bp GTGCTTCCTGGGAAGAAGGAGTCGGCTCCAGGCTACTGCTTTCGCCTGTGGCTTGCCTGGCGGTCCAGATaGTGCATCGCGTCCTTGACC +
Preference number: 4 (lower is better)
Translates to: VLPGKKESAPGYCFRLWLAWRSR*CIASLT
Trigger: GGTCAAGGACGCGATGCAGCATCTGGACCGCCAGGC...AAGCCACAGGCGAAAGCAGTAGCCTGGAGCCGACTCCTTCTTCCCAGGAAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564948.1
CDS-3UTR GCA 90 bp AGAACTCTGCCACGTGGCGGCAGTGGAGACGGGAGGCACTCGGAAAAGCTCCGTTTCACCTCGCCGATCTaGTTCTCGAAGGTGCCGCCA +
Preference number: 4 (lower is better)
Translates to: RTLPRGGSGDGRHSEKLRFTSPI*FSKVPP
Trigger: TGGCGGCACCTTCGAGAAGCAGATCGGCGAGGTGAA...ACGGAGCTTTTCCGAGTGCCTCCCGTCTCCACTGCCGCCACGTGGCAGAGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564948.1
CDS-3UTR GCA 90 bp CCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGGGCCTCAGAGGTCTTTaGCTCAGCCCAGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PASGKNLACVGWDHKGLVGLRGL*LSPEAG
Trigger: CCCAGCCTCTGGGCTGAGGCAAAGACCTCTGAGGCC...CACAAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp AGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGGCCTCAGAGGTCTTTaGCTCAGCCCAGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SPASGKNLACVGWDHKGLGLRGL*LSPEAG
Trigger: CCCAGCCTCTGGGCTGAGGCAAAGACCTCTGAGGCC...AAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp TGTGTGAGATGGGAGGACTGTAGTACTCACAGGGCAGCATGGGTCAGAAGGGGCAGACGTGGGCCATGCTaGCAGGCCCCCAGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: CVRWEDCSTHRAAWVRRGRRGPC*QAPSPG
Trigger: TCCAGGACTGGGGGCCTGGCAGCATGGCCCACGTCT...GCCCCTTCTGACCCATGCTGCCCTGTGAGTACTACAGTCCTCCCATCTCACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp TGTGTGAGATGGGAGGACTGTAGTACTCACAGGGCAGCATGGGTCAGAAGGGGCCAGAGACGTGGGCCATaGTGCCAGGCCCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: CVRWEDCSTHRAAWVRRGQRRGP*CQAPSP
Trigger: AGGACTGGGGGCCTGGCAGCATGGCCCACGTCTCTG...GCCCCTTCTGACCCATGCTGCCCTGTGAGTACTACAGTCCTCCCATCTCACACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp TGGAAAACATCATGGAAATCCCTGGTCCTGTCTGCGGTGGGGACAAAGGTGAAGAGCAGCCCCACCGCCTaGCTCCGGGTGGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: WKTSWKSLVLSAVGTKVKSSPTA*LRVAAW
Trigger: CCAGGCTGCCACCCGGAGGCAGGCGGTGGGGCTGCT...CTTCACCTTTGTCCCCACCGCAGACAGGACCAGGGATTTCCATGATGTTTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp AGGGAGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGGGAGCTTGGAGCTTGTaGACCTGGAGGATCCCACCT +
Preference number: 4 (lower is better)
Translates to: REPSLRKESGVCGVGPQGGAWSL*TWRIPP
Trigger: AGGTGGGATCCTCCAGGTGCACAAGCTCCAAGCTCC...CCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp GGGAGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTGAGACACAATCAGGTTaGAGGGAGTGGGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: GSPASGKNLACVGWDHKGETQSG*REWAEG
Trigger: GCCCTCTGCCCACTCCCTGCAACCTGATTGTGTCTC...ACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp TGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGGCCTGGCTGCCTGCAGGAGACAGGGCAGGGTCTGTaGTATCAACTCACTCCCTTG +
Preference number: 4 (lower is better)
Translates to: WRVWGGTTRVLWPGCLQETGQGL*YQLTPL
Trigger: CAAGGGAGTGAGTTGATAGCACAGACCCTGCCCTGT...CTCCTGCAGGCAGCCAGGCCACAAGACCCTTGTGGTCCCACCCCACACACGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp GGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGAGAAGGGCGTCTTGTGGCCTGGCTaGCTGCAGGAGTCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: GALLVRTVRLHPGAGEKGVLWPG*LQESLK
Trigger: CTTCAGAGACTCCTGCAGGCAGCCAGGCCACAAGAC...GCCCTTCTCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp CCATGGAAGGGGGACCAACTGGCCCCAGCGGCTTCCTCACAAAGGAGGCAGGGCCTATCCCCTCACCTCTaGCTTATTTCTTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: PWKGDQLAPAASSQRRQGLSPHL*LISSRC
Trigger: GCAGCGGGAAGAAATAAGGCAGAGGTGAGGGGATAG...GCCCTGCCTCCTTTGTGAGGAAGCCGCTGGGGCCAGTTGGTCCCCCTTCCATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR CCA 90 bp CAGGCCCTGAGCTTCCTGAATATGCTGCGCCACACCCAGCAGGGGAGTGCAGAGAGCAGGACAGTCAGATaGCAGAAGGTGGCCAAGCGG +
Preference number: 4 (lower is better)
Translates to: QALSFLNMLRHTQQGSAESRTVR*QKVAKR
Trigger: CCGCTTGGCCACCTTCTGCCATCTGACTGTCCTGCT...CTCTGCACTCCCCTGCTGGGTGTGGCGCAGCATATTCAGGAAGCTCAGGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006053.7
ENST00000563383.1
CDS-3UTR CCA 90 bp GAAGAAGGAGTCGGCTCCAGGCTACTGCTTTCGCCTGTGGCTTCGGGCTCCAGGAGCAGGACAGTCAGATaGCAGAAGGTGGCCAAGCGG +
Preference number: 4 (lower is better)
Translates to: EEGVGSRLLLSPVASGSRSRTVR*QKVAKR
Trigger: CCGCTTGGCCACCTTCTGCCATCTGACTGTCCTGCT...CCTGGAGCCCGAAGCCACAGGCGAAAGCAGTAGCCTGGAGCCGACTCCTTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564948.1
CDS-3UTR CCA 90 bp TTGCAGGCCCTCTGGGCCTCAGGGTCCAAAGACAAGTTAGTCCATTGGCAGGGACGGCAGGGGTGGTCCTaGGCTTCACCTCGCCGATCT +
Preference number: 4 (lower is better)
Translates to: LQALWASGSKDKLVHWQGRQGWS*ASPRRS
Trigger: AGATCGGCGAGGTGAAGCCCAGGACCACCCCTGCCG...TCCCTGCCAATGGACTAACTTGTCTTTGGACCCTGAGGCCCAGAGGGCCTGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp AGAACTCTGCCACGTGGCGGCAGTGGAGACGGGAGGCACTCGGAAAAGCTCCGTTACTGCTTTCGCCTGTaGCTTCGGGCTCCAGGACCA +
Preference number: 4 (lower is better)
Translates to: RTLPRGGSGDGRHSEKLRYCFRL*LRAPGP
Trigger: TGGTCCTGGAGCCCGAAGCCACAGGCGAAAGCAGTA...ACGGAGCTTTTCCGAGTGCCTCCCGTCTCCACTGCCGCCACGTGGCAGAGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564948.1
CDS-3UTR CCA 90 bp GTGGGGGTGGGTATGAGGATGAGGGATCCCAGGCAGCTGTCTGAATCAAACAACGCCACGTGGCGGCAGTaGAGACGGGAGGCACTCGGA +
Preference number: 4 (lower is better)
Translates to: VGVGMRMRDPRQLSESNNATWRQ*RREALG
Trigger: TCCGAGTGCCTCCCGTCTCCACTGCCGCCACGTGGC...GTTGTTTGATTCAGACAGCTGCCTGGGATCCCTCATCCTCATACCCACCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp CCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGCTGGGCCCAGGTTGGTaGGGAGCAGAACTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: PASGKNLACVGWDHKGLVLGPGW*GAELCH
Trigger: GTGGCAGAGTTCTGCTCCCCACCAACCTGGGCCCAG...CACAAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp AGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTATTCTCCTCTGGGGCTaGGGAGGACGCAGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: SPASGKNLACVGWDHKGLILLWG*GGRSGG
Trigger: GCCTCCACTGCGTCCTCCCCAGCCCCAGAGGAGAAT...AAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TGTCTAAGGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGACCAGGCCCCCAGTCCTaGAAGGCATCCGTGTGCGCT +
Preference number: 4 (lower is better)
Translates to: CLRCSAGKDCEAASRGWRPGPQS*KASVCA
Trigger: AGCGCACACGGATGCCTTCCAGGACTGGGGGCCTGG...TCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACCTTAGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp AGGGAGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTGGGGGTCCATGGTaGCATGGATGGGTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: REPSLRKESGVCGVGPQGSGGPW*HGWVPQ
Trigger: CTGAGGAACCCATCCATGCCACCATGGACCCCCAGA...CCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GTGGGGGTGGGTATGAGGATGAGGGATCCCAGGCAGCTGTCTGAATCAAACAACCTCCGGGTGGCAGCCTaGGCGTCAGGGACAGGAGTG +
Preference number: 4 (lower is better)
Translates to: VGVGMRMRDPRQLSESNNLRVAA*ASGTGV
Trigger: CACTCCTGTCCCTGACGCCCAGGCTGCCACCCGGAG...GTTGTTTGATTCAGACAGCTGCCTGGGATCCCTCATCCTCATACCCACCCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GTGTTGTCAGGGGGACAGGTATTCCTTACCTCCCTCTTTCCTTTCACAGATGGGCCGCCTGCCTCCGGGTaGCAGCCTGGGCGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: VLSGGQVFLTSLFPFTDGPPASG*QPGRQG
Trigger: TCCCTGACGCCCAGGCTGCCACCCGGAGGCAGGCGG...CCCATCTGTGAAAGGAAAGAGGGAGGTAAGGAATACCTGTCCCCCTGACAACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp CAGGCCCTGAGCTTCCTGAATATGCTGCGCCACACCCAGCAGGGGAGTGCAGAGGAATGCCTGGGAGCTTaGAGCTTGTGCACCTGGAGG +
Preference number: 4 (lower is better)
Translates to: QALSFLNMLRHTQQGSAEECLGA*SLCTWR
Trigger: CCTCCAGGTGCACAAGCTCCAAGCTCCCAGGCATTC...CTCTGCACTCCCCTGCTGGGTGTGGCGCAGCATATTCAGGAAGCTCAGGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGAGAAGGGCCTCCTGGGGAATGCCTaGGAGCTTGGAGCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: GALLVRTVRLHPGAGEKGLLGNA*ELGACA
Trigger: TGCACAAGCTCCAAGCTCCCAGGCATTCCCCAGGAG...GCCCTTCTCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp ACCCAGCCCATAAGAGGCCCCTCAGGTAGACGGCAAGGGTCGGGGACAATCCAACTGGCAGGTGGAGAATaGTCAAGGCTGGCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: TQPIRGPSGRRQGSGTIQLAGGE*SRLASW
Trigger: CCAGGAGGCCAGCCTTGACCATTCTCCACCTGCCAG...TTGGATTGTCCCCGACCCTTGCCGTCTACCTGAGGGGCCTCTTATGGGCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGGCCTGGCTGCCTGCAGGAGTCATTGGGGCTGGGATaGCGTCAAAGGGAACCTCTA +
Preference number: 4 (lower is better)
Translates to: WRVWGGTTRVLWPGCLQESLGLG*RQREPL
Trigger: TAGAGGTTCCCTTTGACGCCATCCCAGCCCCAATGA...CTCCTGCAGGCAGCCAGGCCACAAGACCCTTGTGGTCCCACCCCACACACGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp AGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACCAGGGACCAAGACATGTCACCAGTaGGGGCGTGGGCTCTGTACA +
Preference number: 4 (lower is better)
Translates to: RRQGSGTIQGRGELPPGTKTCHQ*GRGLCT
Trigger: TGTACAGAGCCCACGCCCCCACTGGTGACATGTCTT...GGTCCCTGGTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGAGAAGGGCCGGGGCCTTCAGGGATaGTCTCTGCTCTGCCCATTT +
Preference number: 4 (lower is better)
Translates to: GALLVRTVRLHPGAGEKGRGLQG*SLLCPF
Trigger: AAATGGGCAGAGCAGAGACCATCCCTGAAGGCCCCG...GCCCTTCTCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp CCATGGAAGGGGGACCAACTGGCCCCAGCGGCTTCCTCACAAAGGAGGCAGGGCTCCTGGAGCCTTTCCTaGGCTTCTTGGACATGTGTC +
Preference number: 4 (lower is better)
Translates to: PWKGDQLAPAASSQRRQGSWSLS*ASWTCV
Trigger: GACACATGTCCAAGAAGCCCAGGAAAGGCTCCAGGA...GCCCTGCCTCCTTTGTGAGGAAGCCGCTGGGGCCAGTTGGTCCCCCTTCCATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp CCATGGAAGGGGGACCAACTGGCCCCAGCGGCTTCCTCACAAAGGAGGCAGGGCGAAGCATCAGGAATGTaGCTGCTCCTGGAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: PWKGDQLAPAASSQRRQGEASGM*LLLEPF
Trigger: GAAAGGCTCCAGGAGCAGCCACATTCCTGATGCTTC...GCCCTGCCTCCTTTGTGAGGAAGCCGCTGGGGCCAGTTGGTCCCCCTTCCATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp AGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACCAGGGACCCAGAACAAAGTGCATTaGGCCCACTCCCACCCTCTC +
Preference number: 4 (lower is better)
Translates to: RRQGSGTIQGRGELPPGTQNKVH*AHSHPL
Trigger: GAGAGGGTGGGAGTGGGCCCAATGCACTTTGTTCTG...GGTCCCTGGTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TGTCTAAGGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGAGGAAGGGGGACCAACTaGCCCCAGCGGCTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: CLRCSAGKDCEAASRGWRGRGTN*PQRLPH
Trigger: GTGAGGAAGCCGCTGGGGCCAGTTGGTCCCCCTTCC...TCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACCTTAGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp AGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTAGCTTCAGGGGGTTaGGGGCTGTGTGCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: SPASGKNLACVGWDHKGLVASGG*GLCAGG
Trigger: CCCTCCTGCACACAGCCCCCAACCCCCTGAAGCTAC...AAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR TCA 90 bp TGTCTAAGGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGAGCTGGGGGTCCCTTCTaGGGAGACAGGGACCACAGA +
Preference number: 4 (lower is better)
Translates to: CLRCSAGKDCEAASRGWRAGGPF*GDRDHR
Trigger: TCTGTGGTCCCTGTCTCCTCAGAAGGGACCCCCAGC...TCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACCTTAGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp GTGGGGGTGGGTATGAGGATGAGGGATCCCAGGCAGCTGTCTGAATCAAACAACGGAGGCTCTGGTAGGTaGACATGGCCACCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: VGVGMRMRDPRQLSESNNGGSGR*TWPPPG
Trigger: GCCTGGGGGTGGCCATGTTCACCTACCAGAGCCTCC...GTTGTTTGATTCAGACAGCTGCCTGGGATCCCTCATCCTCATACCCACCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp CAAGGCTGGCCTCCTGGGGAATGCCTGGGAGCTTGGAGCTTGTGCACCTGGAGGGGGCACCAGGACATATaGATTACTACCACAGCTCCG +
Preference number: 4 (lower is better)
Translates to: QGWPPGECLGAWSLCTWRGHQDI*ITTTAP
Trigger: CGGAGCTGTGGTAGTAATTCATATGTCCTGGTGCCC...CCTCCAGGTGCACAAGCTCCAAGCTCCCAGGCATTCCCCAGGAGGCCAGCCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp CAGGCCCTGAGCTTCCTGAATATGCTGCGCCACACCCAGCAGGGGAGTGCAGAGCCAAGCACCCATCTGTaGAGGAGTGTTCCTAGCACC +
Preference number: 4 (lower is better)
Translates to: QALSFLNMLRHTQQGSAEPSTHL*RSVPST
Trigger: GGTGCTAGGAACACTCCTTCACAGATGGGTGCTTGG...CTCTGCACTCCCCTGCTGGGTGTGGCGCAGCATATTCAGGAAGCTCAGGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp GGGAGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTAAAATACGGTGCCCCTaGGTGACCAGAGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: GSPASGKNLACVGWDHKGKIRCP*VTRDRR
Trigger: CCTCCTGTCTCTGGTCACTCAGGGGCACCGTATTTT...ACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR TCA 90 bp CCTCAGGTAGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACAACCCCGACCGCAAGTaGTTCTCCCACTTCAACCTC +
Preference number: 4 (lower is better)
Translates to: PQVDGKGRGQSKGEVSCHNPDRK*FSHFNL
Trigger: GAGGTTGAAGTGGGAGAATCACTTGCGGTCGGGGTT...GTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCTACCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR GCA 90 bp CAAGGCTGGCCTCCTGGGGAATGCCTGGGAGCTTGGAGCTTGTGCACCTGGAGGGCACAGAACAGCCTGTaGTGTCTCGTCTCCAAGATG +
Preference number: 4 (lower is better)
Translates to: QGWPPGECLGAWSLCTWRAQNSL*CLVSKM
Trigger: CATCTTGGAGACGAGACAGCACAGGCTGTTCTGTGC...CCTCCAGGTGCACAAGCTCCAAGCTCCCAGGCATTCCCCAGGAGGCCAGCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp AGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGCGTCCTTGACCCATTaGTCCTTCGGGTCGGCACAG +
Preference number: 4 (lower is better)
Translates to: SPASGKNLACVGWDHKGLASLTH*SFGSAQ
Trigger: CTGTGCCGACCCGAAGGAGCAATGGGTCAAGGACGC...AAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp ACCCAGCCCATAAGAGGCCCCTCAGGTAGACGGCAAGGGTCGGGGACAATCCAATGGCGGTCCAGATGCTaGATCGCGTCCTTGACCCAT +
Preference number: 4 (lower is better)
Translates to: TQPIRGPSGRRQGSGTIQWRSRC*IASLTH
Trigger: ATGGGTCAAGGACGCGATGCAGCATCTGGACCGCCA...TTGGATTGTCCCCGACCCTTGCCGTCTACCTGAGGGGCCTCTTATGGGCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp CCATGGAAGGGGGACCAACTGGCCCCAGCGGCTTCCTCACAAAGGAGGCAGGGCAGGGACTGTCTAAGGTaGTCTGCTGGTAAGGACTGT +
Preference number: 4 (lower is better)
Translates to: PWKGDQLAPAASSQRRQGRDCLR*SAGKDC
Trigger: ACAGTCCTTACCAGCAGAGCACCTTAGACAGTCCCT...GCCCTGCCTCCTTTGTGAGGAAGCCGCTGGGGCCAGTTGGTCCCCCTTCCATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp GCCAGGCCAGCCGGTGCAGCCCCATCCAGGCATGCTCGAGCCTTCAGCAGCCAATTCAGGGATGGTCTCTaGTCTGCCCATTTCCATTTG +
Preference number: 4 (lower is better)
Translates to: ARPAGAAPSRHARAFSSQFRDGL*SAHFHL
Trigger: CAAATGGAAATGGGCAGAGCAGAGACCATCCCTGAA...TTGGCTGCTGAAGGCTCGAGCATGCCTGGATGGGGCTGCACCGGCTGGCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp AGGGAGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGCATCAGGAATGTGGCTaGTCCTGGAGCCTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: REPSLRKESGVCGVGPQGHQECG*SWSLSW
Trigger: CCAGGAAAGGCTCCAGGAGCAGCCACATTCCTGATG...CCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp ACCCAGCCCATAAGAGGCCCCTCAGGTAGACGGCAAGGGTCGGGGACAATCCAAGTCTTGTGGCCTGGCTaGCTGCAGGAGTCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: TQPIRGPSGRRQGSGTIQVLWPG*LQESLK
Trigger: CTTCAGAGACTCCTGCAGGCAGCCAGGCCACAAGAC...TTGGATTGTCCCCGACCCTTGCCGTCTACCTGAGGGGCCTCTTATGGGCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp CCATGGAAGGGGGACCAACTGGCCCCAGCGGCTTCCTCACAAAGGAGGCAGGGCCTTTGTAGAGTCTGCTaGTTCCTCTCTCCATCGCTC +
Preference number: 4 (lower is better)
Translates to: PWKGDQLAPAASSQRRQGLCRVC*FLSPSL
Trigger: GAGCGATGGAGAGAGGAAGCAGCAGACTCTACAAAG...GCCCTGCCTCCTTTGTGAGGAAGCCGCTGGGGCCAGTTGGTCCCCCTTCCATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR GCA 90 bp GCCAGGCCAGCCGGTGCAGCCCCATCCAGGCATGCTCGAGCCTTCAGCAGCCAAAGACTTTGTAGAGTCTaGTGCTTCCTCTCTCCATCG +
Preference number: 4 (lower is better)
Translates to: ARPAGAAPSRHARAFSSQRLCRV*CFLSPS
Trigger: CGATGGAGAGAGGAAGCAGCAGACTCTACAAAGTCT...TTGGCTGCTGAAGGCTCGAGCATGCCTGGATGGGGCTGCACCGGCTGGCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR CCA 90 bp GGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGAGAAGGGCGAGATATCGGAGCCATaGCTGAGGGTGGGCAAGAGT +
Preference number: 4 (lower is better)
Translates to: GALLVRTVRLHPGAGEKGEISEP*LRVGKS
Trigger: ACTCTTGCCCACCCTCAGCCATGGCTCCGATATCTC...GCCCTTCTCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006053.7
ENST00000563383.1
CDS-3UTR CCA 90 bp CCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGGTTAGGGCAGCAGCCTaGCGGTCCAGATGCTGCATC +
Preference number: 4 (lower is better)
Translates to: PASGKNLACVGWDHKGLVVRAAA*RSRCCI
Trigger: GATGCAGCATCTGGACCGCCAGGCTGCTGCCCTAAC...CACAAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TGTCTAAGGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGAAGGCTGGGCCCAGGTTaGTGGGGAGCAGAACTCTGC +
Preference number: 4 (lower is better)
Translates to: CLRCSAGKDCEAASRGWRRLGPG*WGAELC
Trigger: GCAGAGTTCTGCTCCCCACCAACCTGGGCCCAGCCT...TCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACCTTAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TGTGTGAGATGGGAGGACTGTAGTACTCACAGGGCAGCATGGGTCAGAAGGGGCAGGCTGGGCCCAGGTTaGTGGGGAGCAGAACTCTGC +
Preference number: 4 (lower is better)
Translates to: CVRWEDCSTHRAAWVRRGRLGPG*WGAELC
Trigger: GCAGAGTTCTGCTCCCCACCAACCTGGGCCCAGCCT...GCCCCTTCTGACCCATGCTGCCCTGTGAGTACTACAGTCCTCCCATCTCACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TTGCAGGCCCTCTGGGCCTCAGGGTCCAAAGACAAGTTAGTCCATTGGCAGGGAATTCTCCTCTGGGGCTaGGGAGGACGCAGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: LQALWASGSKDKLVHWQGILLWG*GGRSGG
Trigger: GCCTCCACTGCGTCCTCCCCAGCCCCAGAGGAGAAT...TCCCTGCCAATGGACTAACTTGTCTTTGGACCCTGAGGCCCAGAGGGCCTGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TGTCTAAGGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGACGGAGCATTCTCCTCTaGGGCTGGGGAGGACGCAGT +
Preference number: 4 (lower is better)
Translates to: CLRCSAGKDCEAASRGWRRSILL*GWGGRS
Trigger: ACTGCGTCCTCCCCAGCCCCAGAGGAGAATGCTCCG...TCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACCTTAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TGTCTAAGGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGACCACTGGCTCCCTGCTaGGGGTCCCTTCTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: CLRCSAGKDCEAASRGWRPLAPC*GSLLRR
Trigger: TCTCCTCAGAAGGGACCCCCAGCAGGGAGCCAGTGG...TCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACCTTAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp AGGGAGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGGGGTCCATGGTGGCATaGATGGGTTCCTCAGCCTTA +
Preference number: 4 (lower is better)
Translates to: REPSLRKESGVCGVGPQGGSMVA*MGSSAL
Trigger: TAAGGCTGAGGAACCCATCCATGCCACCATGGACCC...CCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCTCCCT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp ACCCAGCCCATAAGAGGCCCCTCAGGTAGACGGCAAGGGTCGGGGACAATCCAAGAATGCCTGGGAGCTTaGAGCTTGTGCACCTGGAGG +
Preference number: 4 (lower is better)
Translates to: TQPIRGPSGRRQGSGTIQECLGA*SLCTWR
Trigger: CCTCCAGGTGCACAAGCTCCAAGCTCCCAGGCATTC...TTGGATTGTCCCCGACCCTTGCCGTCTACCTGAGGGGCCTCTTATGGGCTGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp AGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTACTCACAGGGCAGCATaGGTCAGAAGGGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: SPASGKNLACVGWDHKGLTHRAA*VRRGWA
Trigger: TGCCCAGCCCCTTCTGACCCATGCTGCCCTGTGAGT...AAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp AGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACCAGGGACCTCCTGGAGCCTTTCCTaGGCTTCTTGGACATGTGTC +
Preference number: 4 (lower is better)
Translates to: RRQGSGTIQGRGELPPGTSWSLS*ASWTCV
Trigger: GACACATGTCCAAGAAGCCCAGGAAAGGCTCCAGGA...GGTCCCTGGTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp CAAGGCTGGCCTCCTGGGGAATGCCTGGGAGCTTGGAGCTTGTGCACCTGGAGGTCCTGGAGCCTTTCCTaGGCTTCTTGGACATGTGTC +
Preference number: 4 (lower is better)
Translates to: QGWPPGECLGAWSLCTWRSWSLS*ASWTCV
Trigger: GACACATGTCCAAGAAGCCCAGGAAAGGCTCCAGGA...CCTCCAGGTGCACAAGCTCCAAGCTCCCAGGCATTCCCCAGGAGGCCAGCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp AGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTCTGGCGTGTGTGGGGTaGGACCACAAGGGTCTTGTG +
Preference number: 4 (lower is better)
Translates to: SPASGKNLACVGWDHKGLLACVG*DHKGLV
Trigger: CACAAGACCCTTGTGGTCCCACCCCACACACGCCAG...AAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGAGAAGGGCCATCATGGAAATCCCTaGTCCTGTCTGCGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: GALLVRTVRLHPGAGEKGHHGNP*SCLRWG
Trigger: TCCCCACCGCAGACAGGACCAGGGATTTCCATGATG...GCCCTTCTCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GGGAGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCATCATGGAAATCCCTaGTCCTGTCTGCGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: GSPASGKNLACVGWDHKGHHGNP*SCLRWG
Trigger: TCCCCACCGCAGACAGGACCAGGGATTTCCATGATG...ACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGAGAAGGGCCAGAACAAAGTGCATTaGGCCCACTCCCACCCTCTC +
Preference number: 4 (lower is better)
Translates to: GALLVRTVRLHPGAGEKGQNKVH*AHSHPL
Trigger: GAGAGGGTGGGAGTGGGCCCAATGCACTTTGTTCTG...GCCCTTCTCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGGCCTGGCTGCCTGCAGGAGGGCAGTCCCCTAAAATaGCCTGCAGGTGTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: WRVWGGTTRVLWPGCLQEGSPLK*PAGVFF
Trigger: AAAGAAGACACCTGCAGGCCATTTTAGGGGACTGCC...CTCCTGCAGGCAGCCAGGCCACAAGACCCTTGTGGTCCCACCCCACACACGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR CCA 90 bp AGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGCCCACCCTGCTTTGTaGGAAGGTGGTTTAGGGCCG +
Preference number: 4 (lower is better)
Translates to: SPASGKNLACVGWDHKGLAHPAL*EGGLGP
Trigger: CGGCCCTAAACCACCTTCCCACAAAGCAGGGTGGGC...AAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565912.1
3UTR CAA 72 bp GGAATGTGGCTGCTCCTGGAGCCTTTCCTGGGCTTCTaGGACATGTGTCTGGAGCCCTCCCTCCCTCTTAGC +
Preference number: 4 (lower is better)
Translates to: GMWLLLEPFLGF*DMCLEPSLPLS
Trigger: GCTAAGAGGGAGGGAGGGCTCCAGACACATGTCCAAGAAGCCCAGGAAAGGCTCCAGGAGCAGCCACATTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp GTGTTGTCAGGGGGACAGGTATTCCTTACCTCCCTCTTTCCTTTCACAGATGGGCTGGGGCTCTGTCCCTaGCCCCACACACGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: VLSGGQVFLTSLFPFTDGLGLCP*PHTRWP
Trigger: AGGCCAGCGTGTGTGGGGTCAGGGACAGAGCCCCAG...CCCATCTGTGAAAGGAAAGAGGGAGGTAAGGAATACCTGTCCCCCTGACAACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp AGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACCAGGGACCCCTGATGCTCATGTGTaGGATGGGAGGACTGTAGTA +
Preference number: 4 (lower is better)
Translates to: RRQGSGTIQGRGELPPGTPDAHV*DGRTVV
Trigger: TACTACAGTCCTCCCATCTCACACATGAGCATCAGG...GGTCCCTGGTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp AGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTAGGGCCTCAGGTCAATaGGTGTTGTCAGGGGGACAG +
Preference number: 4 (lower is better)
Translates to: SPASGKNLACVGWDHKGLRASGQ*VLSGGQ
Trigger: CTGTCCCCCTGACAACACTCATTGACCTGAGGCCCT...AAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp CAGGCCCTGAGCTTCCTGAATATGCTGCGCCACACCCAGCAGGGGAGTGCAGAGAGTGTTTTCAAGGAGTaGGAGAGGTGGGAAGGGAGC +
Preference number: 4 (lower is better)
Translates to: QALSFLNMLRHTQQGSAESVFKE*ERWEGS
Trigger: GCTCCCTTCCCACCTCTCTCACTCCTTGAAAACACT...CTCTGCACTCCCCTGCTGGGTGTGGCGCAGCATATTCAGGAAGCTCAGGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp AGGGAGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTGGAGATGGACGGTATaGATAAGGTGGGGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: REPSLRKESGVCGVGPQGWRWTV*IRWGQS
Trigger: ACTCTGCCCCCACCTTATTCATACCGTCCATCTCCA...CCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR TCA 90 bp TGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGGCCTGGCTGCCTGCAGGAGGAAGGTGGGGTCTGCTaGATAGATGATCCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: WRVWGGTTRVLWPGCLQEEGGVC*IDDPLF
Trigger: GAACAAAGGATCATCTATTCAGCAGACCCCACCTTC...CTCCTGCAGGCAGCCAGGCCACAAGACCCTTGTGGTCCCACCCCACACACGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR GCA 90 bp GGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGAGAAGGGCGCACAGAACAGCCTGTaGTGTCTCGTCTCCAAGATG +
Preference number: 4 (lower is better)
Translates to: GALLVRTVRLHPGAGEKGAQNSL*CLVSKM
Trigger: CATCTTGGAGACGAGACAGCACAGGCTGTTCTGTGC...GCCCTTCTCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp CAGGCCCTGAGCTTCCTGAATATGCTGCGCCACACCCAGCAGGGGAGTGCAGAGGCACAGAACAGCCTGTaGTGTCTCGTCTCCAAGATG +
Preference number: 4 (lower is better)
Translates to: QALSFLNMLRHTQQGSAEAQNSL*CLVSKM
Trigger: CATCTTGGAGACGAGACAGCACAGGCTGTTCTGTGC...CTCTGCACTCCCCTGCTGGGTGTGGCGCAGCATATTCAGGAAGCTCAGGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp CCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGTGGCGGTCCAGATGCTaGATCGCGTCCTTGACCCAT +
Preference number: 4 (lower is better)
Translates to: PASGKNLACVGWDHKGLVWRSRC*IASLTH
Trigger: ATGGGTCAAGGACGCGATGCAGCATCTGGACCGCCA...CACAAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp GTGCTTCCTGGGAAGAAGGAGTCGGCTCCAGGCTACTGCTTTCGCCTGTGGCTTTGGCGGTCCAGATGCTaGATCGCGTCCTTGACCCAT +
Preference number: 4 (lower is better)
Translates to: VLPGKKESAPGYCFRLWLWRSRC*IASLTH
Trigger: ATGGGTCAAGGACGCGATGCAGCATCTGGACCGCCA...AAGCCACAGGCGAAAGCAGTAGCCTGGAGCCGACTCCTTCTTCCCAGGAAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564948.1
CDS-3UTR GCA 90 bp GGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGAGAAGGGCTCTGCTTCTCGAAGGTaGCGCCATTTCGAGTTAGGG +
Preference number: 4 (lower is better)
Translates to: GALLVRTVRLHPGAGEKGSASRR*RHFELG
Trigger: CCCTAACTCGAAATGGCGGCACCTTCGAGAAGCAGA...GCCCTTCTCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp CCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGTTCACCTCGCCGATCTaGTTCTCGAAGGTGCCGCCA +
Preference number: 4 (lower is better)
Translates to: PASGKNLACVGWDHKGLVFTSPI*FSKVPP
Trigger: TGGCGGCACCTTCGAGAAGCAGATCGGCGAGGTGAA...CACAAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp GTGGGGGTGGGTATGAGGATGAGGGATCCCAGGCAGCTGTCTGAATCAAACAACTGGGGAGCAGAACTCTaGCACGTGGCGGCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: VGVGMRMRDPRQLSESNNWGAEL*HVAAVE
Trigger: CTCCACTGCCGCCACGTGGCAGAGTTCTGCTCCCCA...GTTGTTTGATTCAGACAGCTGCCTGGGATCCCTCATCCTCATACCCACCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp TGTGTGAGATGGGAGGACTGTAGTACTCACAGGGCAGCATGGGTCAGAAGGGGCCTCCGCCATCTCTCCTaGCATCTTTCGAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: CVRWEDCSTHRAAWVRRGLRHLS*HLSRAA
Trigger: GGCTGCCCTCGAAAGATGGCAGGAGAGATGGCGGAG...GCCCCTTCTGACCCATGCTGCCCTGTGAGTACTACAGTCCTCCCATCTCACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp CCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGGGAGCTTGGAGCTTGTaGACCTGGAGGATCCCACCT +
Preference number: 4 (lower is better)
Translates to: PASGKNLACVGWDHKGLVGAWSL*TWRIPP
Trigger: AGGTGGGATCCTCCAGGTGCACAAGCTCCAAGCTCC...CACAAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp TGTGTGAGATGGGAGGACTGTAGTACTCACAGGGCAGCATGGGTCAGAAGGGGCTGGCCTCCTGGGGAATaGCTGGGAGCTTGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: CVRWEDCSTHRAAWVRRGWPPGE*LGAWSL
Trigger: CAAGCTCCAAGCTCCCAGGCATTCCCCAGGAGGCCA...GCCCCTTCTGACCCATGCTGCCCTGTGAGTACTACAGTCCTCCCATCTCACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp AGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTCTCCCCTTCCCACAATaGCTAACCAAGGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: SPASGKNLACVGWDHKGLLPFPQ*LTKGRA
Trigger: GGCTCTGCCCTTGGTTAGGCATTGTGGGAAGGGGAG...AAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp AGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACCAGGGACCAGGGACTGTCTAAGGTaGTCTGCTGGTAAGGACTGT +
Preference number: 4 (lower is better)
Translates to: RRQGSGTIQGRGELPPGTRDCLR*SAGKDC
Trigger: ACAGTCCTTACCAGCAGAGCACCTTAGACAGTCCCT...GGTCCCTGGTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp TGTCTAAGGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGAAGCCCCATCCAGGCATaGTCGAGCCTTCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: CLRCSAGKDCEAASRGWRSPIQA*SSLQQP
Trigger: TGGCTGCTGAAGGCTCGAGCATGCCTGGATGGGGCT...TCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACCTTAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp TATGTTGGTGGCTTGATGGTGGAACTAGGATCAGAACCCAGCCTTCAGACTCAGGGCGGCAGAGCTCAGTaGTGTCCCCTTGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: YVGGLMVELGSEPSLQTQGGRAQ*CPLAAA
Trigger: GGCGGCGGCAAGGGGACAGCACTGAGCTCTGCCGCC...CTGAGTCTGAAGGCTGGGTTCTGATCCTAGTTCCACCATCAAGCCACCAACATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563383.1
CDS-3UTR GCA 90 bp GGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGAGAAGGGCGGTACTGAGTCATCCTaGCTAGGAGGGAAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: GALLVRTVRLHPGAGEKGGTESS*LGGKRH
Trigger: ATGCCTCTTCCCTCCTAGGCAGGATGACTCAGTACC...GCCCTTCTCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR CCA 90 bp AGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTTACTGCTTTCGCCTGTaGCTTCGGGCTCCAGGACCA +
Preference number: 4 (lower is better)
Translates to: SPASGKNLACVGWDHKGLYCFRL*LRAPGP
Trigger: TGGTCCTGGAGCCCGAAGCCACAGGCGAAAGCAGTA...AAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TGTGTGAGATGGGAGGACTGTAGTACTCACAGGGCAGCATGGGTCAGAAGGGGCGCCCTCTGTGCTTCCTaGGAAGAAGGAGTCGGCTCC +
Preference number: 4 (lower is better)
Translates to: CVRWEDCSTHRAAWVRRGALCAS*EEGVGS
Trigger: GGAGCCGACTCCTTCTTCCCAGGAAGCACAGAGGGC...GCCCCTTCTGACCCATGCTGCCCTGTGAGTACTACAGTCCTCCCATCTCACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GTGTTGTCAGGGGGACAGGTATTCCTTACCTCCCTCTTTCCTTTCACAGATGGGCCTCAGCCCAGAGGCTaGGCCCAGGTTGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: VLSGGQVFLTSLFPFTDGPQPRG*AQVGGE
Trigger: CTCCCCACCAACCTGGGCCCAGCCTCTGGGCTGAGG...CCCATCTGTGAAAGGAAAGAGGGAGGTAAGGAATACCTGTCCCCCTGACAACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp CAGATACCCTTATCTCCCCTTCCCACAATGCCTAACCAAGGGCAGAGCCTCACTCCAGGCCCCCAGTCCTaGAAGGCATCCGTGTGCGCT +
Preference number: 4 (lower is better)
Translates to: QIPLSPLPTMPNQGQSLTPGPQS*KASVCA
Trigger: AGCGCACACGGATGCCTTCCAGGACTGGGGGCCTGG...AGTGAGGCTCTGCCCTTGGTTAGGCATTGTGGGAAGGGGAGATAAGGGTATCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TTGCAGGCCCTCTGGGCCTCAGGGTCCAAAGACAAGTTAGTCCATTGGCAGGGATCAAGGCTGGCCTCCTaGGGAATGCCTGGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: LQALWASGSKDKLVHWQGSRLAS*GMPGSL
Trigger: CAAGCTCCCAGGCATTCCCCAGGAGGCCAGCCTTGA...TCCCTGCCAATGGACTAACTTGTCTTTGGACCCTGAGGCCCAGAGGGCCTGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TGTCTAAGGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGATCAAGGCTGGCCTCCTaGGGAATGCCTGGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: CLRCSAGKDCEAASRGWRSRLAS*GMPGSL
Trigger: CAAGCTCCCAGGCATTCCCCAGGAGGCCAGCCTTGA...TCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACCTTAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TGTGTGAGATGGGAGGACTGTAGTACTCACAGGGCAGCATGGGTCAGAAGGGGCGGAGAGTTTTGGGGCTaGGGTGAGTTGGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: CVRWEDCSTHRAAWVRRGGEFWG*GELGGH
Trigger: GTGGCCTCCCAACTCACCCCAGCCCCAAAACTCTCC...GCCCCTTCTGACCCATGCTGCCCTGTGAGTACTACAGTCCTCCCATCTCACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp CCATGGAAGGGGGACCAACTGGCCCCAGCGGCTTCCTCACAAAGGAGGCAGGGCTGCTCATGTGTGAGATaGGAGGACTGTAGTACTCAC +
Preference number: 4 (lower is better)
Translates to: PWKGDQLAPAASSQRRQGCSCVR*EDCSTH
Trigger: GTGAGTACTACAGTCCTCCCATCTCACACATGAGCA...GCCCTGCCTCCTTTGTGAGGAAGCCGCTGGGGCCAGTTGGTCCCCCTTCCATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGGCCTGGCTGCCTGCAGGAGTGCTCATGTGTGAGATaGGAGGACTGTAGTACTCAC +
Preference number: 4 (lower is better)
Translates to: WRVWGGTTRVLWPGCLQECSCVR*EDCSTH
Trigger: GTGAGTACTACAGTCCTCCCATCTCACACATGAGCA...CTCCTGCAGGCAGCCAGGCCACAAGACCCTTGTGGTCCCACCCCACACACGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp AGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTCGGGGCCTTCAGGGATaGTCTCTGCTCTGCCCATTT +
Preference number: 4 (lower is better)
Translates to: SPASGKNLACVGWDHKGLRGLQG*SLLCPF
Trigger: AAATGGGCAGAGCAGAGACCATCCCTGAAGGCCCCG...AAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp CAGGCCCTGAGCTTCCTGAATATGCTGCGCCACACCCAGCAGGGGAGTGCAGAGCTTTCCTGGGCTTCTTaGACATGTGTCTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: QALSFLNMLRHTQQGSAELSWAS*TCVWSP
Trigger: AGGGCTCCAGACACATGTCCAAGAAGCCCAGGAAAG...CTCTGCACTCCCCTGCTGGGTGTGGCGCAGCATATTCAGGAAGCTCAGGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TTGCAGGCCCTCTGGGCCTCAGGGTCCAAAGACAAGTTAGTCCATTGGCAGGGACTGGCGTGTGTGGGGTaGGACCACAAGGGTCTTGTG +
Preference number: 4 (lower is better)
Translates to: LQALWASGSKDKLVHWQGLACVG*DHKGLV
Trigger: CACAAGACCCTTGTGGTCCCACCCCACACACGCCAG...TCCCTGCCAATGGACTAACTTGTCTTTGGACCCTGAGGCCCAGAGGGCCTGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TGTCTAAGGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGACTGGCGTGTGTGGGGTaGGACCACAAGGGTCTTGTG +
Preference number: 4 (lower is better)
Translates to: CLRCSAGKDCEAASRGWRLACVG*DHKGLV
Trigger: CACAAGACCCTTGTGGTCCCACCCCACACACGCCAG...TCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACCTTAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp AGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACCAGGGACCTCTATGGACCAGAGCTaGGTTTCCTTCCTCCAAGCA +
Preference number: 4 (lower is better)
Translates to: RRQGSGTIQGRGELPPGTSMDQS*VSFLQA
Trigger: TGCTTGGAGGAAGGAAACCCAGCTCTGGTCCATAGA...GGTCCCTGGTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GGGAGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTGCGTCTTGCTCTCTATaGACCAGAGCTGGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: GSPASGKNLACVGWDHKGASCSL*TRAGFP
Trigger: AGGAAACCCAGCTCTGGTCCATAGAGAGCAAGACGC...ACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TGTCTAAGGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGACTCAAGAAATCCTCCTaGCCGGGTGCGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: CLRCSAGKDCEAASRGWRLKKSS*PGAVAH
Trigger: GTGAGCCACCGCACCCGGCCAGGAGGATTTCTTGAG...TCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACCTTAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR CCA 90 bp CCATGGAAGGGGGACCAACTGGCCCCAGCGGCTTCCTCACAAAGGAGGCAGGGCGCAACCTCAAAATCCTaGGCTCAAGAAATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: PWKGDQLAPAASSQRRQGATSKS*AQEILL
Trigger: CAGGAGGATTTCTTGAGCCCAGGATTTTGAGGTTGC...GCCCTGCCTCCTTTGTGAGGAAGCCGCTGGGGCCAGTTGGTCCCCCTTCCATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR CCA 90 bp GGGAGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTATCCCCTGTACACCCTaGCCTTCAAGGCCTTTGACT +
Preference number: 4 (lower is better)
Translates to: GSPASGKNLACVGWDHKGIPCTP*PSRPLT
Trigger: AGTCAAAGGCCTTGAAGGCCAGGGTGTACAGGGGAT...ACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR TCA 90 bp CAAGGCTGGCCTCCTGGGGAATGCCTGGGAGCTTGGAGCTTGTGCACCTGGAGGTCATCTTGCTGCACGTaGTGTTGCATTTCGTCACAC +
Preference number: 4 (lower is better)
Translates to: QGWPPGECLGAWSLCTWRSSCCT*CCISSH
Trigger: GTGTGACGAAATGCAACATCACGTGCAGCAAGATGA...CCTCCAGGTGCACAAGCTCCAAGCTCCCAGGCATTCCCCAGGAGGCCAGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp GTGGGGGTGGGTATGAGGATGAGGGATCCCAGGCAGCTGTCTGAATCAAACAACGCTGCATCGCGTCCTTaGCCCATTGCTCCTTCGGGT +
Preference number: 4 (lower is better)
Translates to: VGVGMRMRDPRQLSESNNAASRP*PIAPSG
Trigger: ACCCGAAGGAGCAATGGGTCAAGGACGCGATGCAGC...GTTGTTTGATTCAGACAGCTGCCTGGGATCCCTCATCCTCATACCCACCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp TGTGTGAGATGGGAGGACTGTAGTACTCACAGGGCAGCATGGGTCAGAAGGGGCAGGGCCTCAGGTCAATaGGTGTTGTCAGGGGGACAG +
Preference number: 4 (lower is better)
Translates to: CVRWEDCSTHRAAWVRRGRASGQ*VLSGGQ
Trigger: CTGTCCCCCTGACAACACTCATTGACCTGAGGCCCT...GCCCCTTCTGACCCATGCTGCCCTGTGAGTACTACAGTCCTCCCATCTCACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp GGAAGCAGTGCCAGGAAACACCACACTAGCCTCATGCAAGAAAAGACATGTCACCTCCCTCTTAGCGGGTaGTGGGAGGCAGAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: GSSARKHHTSLMQEKTCHLPLSG*WEAEPG
Trigger: CCCGGGCTCTGCCTCCCATCACCCGCTAAGAGGGAG...GTGACATGTCTTTTCTTGCATGAGGCTAGTGTGGTGTTTCCTGGCACTGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp GTCCCTTTCAGAAACAAACAGGGGACTCATGGAAAACATCATGGAAATCCCTGGTGCCACCAGGGACCCTaGGGGGCCAGGCCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: VPFRNKQGTHGKHHGNPWCHQGP*GARPAG
Trigger: ACCGGCTGGCCTGGCCCCTCAGGGTCCCTGGTGGCA...CCAGGGATTTCCATGATGTTTTCCATGAGTCCCCTGTTTGTTTCTGAAAGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp TGTCTAAGGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGAGGAGCTTGGAGCTTGTaGACCTGGAGGATCCCACCT +
Preference number: 4 (lower is better)
Translates to: CLRCSAGKDCEAASRGWRGAWSL*TWRIPP
Trigger: AGGTGGGATCCTCCAGGTGCACAAGCTCCAAGCTCC...TCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACCTTAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp AGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACCAGGGACCGAACCCCTGACTTTATaGCTACAACTTCCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: RRQGSGTIQGRGELPPGTEPLTL*LQLPLS
Trigger: GGAAAGGGGAAGTTGTAGGCATAAAGTCAGGGGTTC...GGTCCCTGGTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TGTCTAAGGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGAAGCAGGACAGTCAGATaGCAGAAGGTGGCCAAGCGG +
Preference number: 4 (lower is better)
Translates to: CLRCSAGKDCEAASRGWRSRTVR*QKVAKR
Trigger: CCGCTTGGCCACCTTCTGCCATCTGACTGTCCTGCT...TCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACCTTAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000006053.7
ENST00000563383.1
CDS-3UTR CCA 90 bp TGTCTAAGGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGATACTGCTTTCGCCTGTaGCTTCGGGCTCCAGGACCA +
Preference number: 4 (lower is better)
Translates to: CLRCSAGKDCEAASRGWRYCFRL*LRAPGP
Trigger: TGGTCCTGGAGCCCGAAGCCACAGGCGAAAGCAGTA...TCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACCTTAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TATGTTGGTGGCTTGATGGTGGAACTAGGATCAGAACCCAGCCTTCAGACTCAGGCCACGTGGCGGCAGTaGAGACGGGAGGCACTCGGA +
Preference number: 4 (lower is better)
Translates to: YVGGLMVELGSEPSLQTQATWRQ*RREALG
Trigger: TCCGAGTGCCTCCCGTCTCCACTGCCGCCACGTGGC...CTGAGTCTGAAGGCTGGGTTCTGATCCTAGTTCCACCATCAAGCCACCAACATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GGAAGCAGTGCCAGGAAACACCACACTAGCCTCATGCAAGAAAAGACATGTCACGGGACCACAGAGACGTaGGCCATGCTGCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: GSSARKHHTSLMQEKTCHGTTET*AMLPGP
Trigger: GGGGCCTGGCAGCATGGCCCACGTCTCTGTGGTCCC...GTGACATGTCTTTTCTTGCATGAGGCTAGTGTGGTGTTTCCTGGCACTGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TGTGTGAGATGGGAGGACTGTAGTACTCACAGGGCAGCATGGGTCAGAAGGGGCTCTGGGGGTCCATGGTaGCATGGATGGGTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: CVRWEDCSTHRAAWVRRGSGGPW*HGWVPQ
Trigger: CTGAGGAACCCATCCATGCCACCATGGACCCCCAGA...GCCCCTTCTGACCCATGCTGCCCTGTGAGTACTACAGTCCTCCCATCTCACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp CCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGAAGACATGTCACCAGTaGGGGCGTGGGCTCTGTACA +
Preference number: 4 (lower is better)
Translates to: PASGKNLACVGWDHKGLVKTCHQ*GRGLCT
Trigger: TGTACAGAGCCCACGCCCCCACTGGTGACATGTCTT...CACAAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp ACCCAGCCCATAAGAGGCCCCTCAGGTAGACGGCAAGGGTCGGGGACAATCCAACTTTCCTGGGCTTCTTaGACATGTGTCTGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: TQPIRGPSGRRQGSGTIQLSWAS*TCVWSP
Trigger: AGGGCTCCAGACACATGTCCAAGAAGCCCAGGAAAG...TTGGATTGTCCCCGACCCTTGCCGTCTACCTGAGGGGCCTCTTATGGGCTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TGTCTAAGGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGAAAGGGTCTTGTGGCCTaGCTGCCTGCAGGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: CLRCSAGKDCEAASRGWRKGLVA*LPAGVS
Trigger: AGAGACTCCTGCAGGCAGCCAGGCCACAAGACCCTT...TCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACCTTAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GTGGGGGTGGGTATGAGGATGAGGGATCCCAGGCAGCTGTCTGAATCAAACAACACCACAAGGGTCTTGTaGCCTGGCTGCCTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: VGVGMRMRDPRQLSESNNTTRVL*PGCLQE
Trigger: CTCCTGCAGGCAGCCAGGCCACAAGACCCTTGTGGT...GTTGTTTGATTCAGACAGCTGCCTGGGATCCCTCATCCTCATACCCACCCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TTGCAGGCCCTCTGGGCCTCAGGGTCCAAAGACAAGTTAGTCCATTGGCAGGGAAGAATCTGGCGTGTGTaGGGTGGGACCACAAGGGTC +
Preference number: 4 (lower is better)
Translates to: LQALWASGSKDKLVHWQGRIWRV*GGTTRV
Trigger: GACCCTTGTGGTCCCACCCCACACACGCCAGATTCT...TCCCTGCCAATGGACTAACTTGTCTTTGGACCCTGAGGCCCAGAGGGCCTGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp CAGGCCCTGAGCTTCCTGAATATGCTGCGCCACACCCAGCAGGGGAGTGCAGAGTCTATGGACCAGAGCTaGGTTTCCTTCCTCCAAGCA +
Preference number: 4 (lower is better)
Translates to: QALSFLNMLRHTQQGSAESMDQS*VSFLQA
Trigger: TGCTTGGAGGAAGGAAACCCAGCTCTGGTCCATAGA...CTCTGCACTCCCCTGCTGGGTGTGGCGCAGCATATTCAGGAAGCTCAGGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GCCAGGCCAGCCGGTGCAGCCCCATCCAGGCATGCTCGAGCCTTCAGCAGCCAAGTTGGTGATGAGGGTTaGAAAAGTCTTTCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: ARPAGAAPSRHARAFSSQVGDEG*KSLSKV
Trigger: GACTTTGGAAAGACTTTTCCAACCCTCATCACCAAC...TTGGCTGCTGAAGGCTCGAGCATGCCTGGATGGGGCTGCACCGGCTGGCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGAGAAGGGCTCCCCAAATCCAAGATaGGAAAAGCCATTGCCCACC +
Preference number: 4 (lower is better)
Translates to: GALLVRTVRLHPGAGEKGSPNPR*EKPLPT
Trigger: GGTGGGCAATGGCTTTTCCCATCTTGGATTTGGGGA...GCCCTTCTCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR CCA 90 bp GGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGAGAAGGGCACCCTCCTTCTGCAATaGAACCTCAGACTGACTCAC +
Preference number: 4 (lower is better)
Translates to: GALLVRTVRLHPGAGEKGTLLLQ*NLRLTH
Trigger: GTGAGTCAGTCTGAGGTTCCATTGCAGAAGGAGGGT...GCCCTTCTCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR CCA 90 bp GCCAGGCCAGCCGGTGCAGCCCCATCCAGGCATGCTCGAGCCTTCAGCAGCCAAATACACAAATTAGCCTaGCATGATGGTGTGCACCTT +
Preference number: 4 (lower is better)
Translates to: ARPAGAAPSRHARAFSSQIHKLA*HDGVHL
Trigger: AAGGTGCACACCATCATGCCAGGCTAATTTGTGTAT...TTGGCTGCTGAAGGCTCGAGCATGCCTGGATGGGGCTGCACCGGCTGGCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR CCA 90 bp TTGCAGGCCCTCTGGGCCTCAGGGTCCAAAGACAAGTTAGTCCATTGGCAGGGAATGTCTGTGGGCATCTaGCTTCCCAACCCCGTGCCA +
Preference number: 4 (lower is better)
Translates to: LQALWASGSKDKLVHWQGMSVGI*LPNPVP
Trigger: TGGCACGGGGTTGGGAAGCCAGATGCCCACAGACAT...TCCCTGCCAATGGACTAACTTGTCTTTGGACCCTGAGGCCCAGAGGGCCTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR TCA 90 bp CCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGTGCGCGTTTGCCGCATaGTGCCTGGTTCTGTTGATA +
Preference number: 4 (lower is better)
Translates to: PASGKNLACVGWDHKGLVCAFAA*CLVLLI
Trigger: TATCAACAGAACCAGGCATCATGCGGCAAACGCGCA...CACAAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp CCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGGGGCACCAGGACATATaGATTACTACCACAGCTCCG +
Preference number: 4 (lower is better)
Translates to: PASGKNLACVGWDHKGLVGHQDI*ITTTAP
Trigger: CGGAGCTGTGGTAGTAATTCATATGTCCTGGTGCCC...CACAAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp GTGGGGGTGGGTATGAGGATGAGGGATCCCAGGCAGCTGTCTGAATCAAACAACCGGTGGGGACAAAGGTaGAGGAGAAGGTCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: VGVGMRMRDPRQLSESNNRWGQR*RRRSWR
Trigger: CCTCCAAGACCTTCTCCTTCACCTTTGTCCCCACCG...GTTGTTTGATTCAGACAGCTGCCTGGGATCCCTCATCCTCATACCCACCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp GGAAGCAGTGCCAGGAAACACCACACTAGCCTCATGCAAGAAAAGACATGTCACTCTGAGCTGCCAGAGTaGCCCCACCTGAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: GSSARKHHTSLMQEKTCHSELPE*PHLSQA
Trigger: GGCCTGGCTCAGGTGGGGTCACTCTGGCAGCTCAGA...GTGACATGTCTTTTCTTGCATGAGGCTAGTGTGGTGTTTCCTGGCACTGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp TATGTTGGTGGCTTGATGGTGGAACTAGGATCAGAACCCAGCCTTCAGACTCAGTCTGAGCTGCCAGAGTaGCCCCACCTGAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: YVGGLMVELGSEPSLQTQSELPE*PHLSQA
Trigger: GGCCTGGCTCAGGTGGGGTCACTCTGGCAGCTCAGA...CTGAGTCTGAAGGCTGGGTTCTGATCCTAGTTCCACCATCAAGCCACCAACATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp TGGAAAACATCATGGAAATCCCTGGTCCTGTCTGCGGTGGGGACAAAGGTGAAGCACTCCCACCCTCTCTaGGCTGCCAGAGTGACCCCA +
Preference number: 4 (lower is better)
Translates to: WKTSWKSLVLSAVGTKVKHSHPL*AARVTP
Trigger: TGGGGTCACTCTGGCAGCTCAGAGAGGGTGGGAGTG...CTTCACCTTTGTCCCCACCGCAGACAGGACCAGGGATTTCCATGATGTTTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp TGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGGCCTGGCTGCCTGCAGGAGCTTGAGTTTCAGATCTaGGTCAAGGTTATATGCAGC +
Preference number: 4 (lower is better)
Translates to: WRVWGGTTRVLWPGCLQELEFQI*VKVICS
Trigger: GCTGCATATAACCTTGACTCAGATCTGAAACTCAAG...CTCCTGCAGGCAGCCAGGCCACAAGACCCTTGTGGTCCCACCCCACACACGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR TCA 90 bp CCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGGTTGCTGAAAGGTACTaGGTCATCCTGCCTAGGAGG +
Preference number: 4 (lower is better)
Translates to: PASGKNLACVGWDHKGLVVAERY*VILPRR
Trigger: CCTCCTAGGCAGGATGACTCAGTACCTTTCAGCAAC...CACAAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR GCA 90 bp TGGAAAACATCATGGAAATCCCTGGTCCTGTCTGCGGTGGGGACAAAGGTGAAGGCCTGGCGGTCCAGATaGTGCATCGCGTCCTTGACC +
Preference number: 4 (lower is better)
Translates to: WKTSWKSLVLSAVGTKVKAWRSR*CIASLT
Trigger: GGTCAAGGACGCGATGCAGCATCTGGACCGCCAGGC...CTTCACCTTTGTCCCCACCGCAGACAGGACCAGGGATTTCCATGATGTTTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp CAGATACCCTTATCTCCCCTTCCCACAATGCCTAACCAAGGGCAGAGCCTCACTCTCGGAAAAGCTCCGTaGCCACAGGCCCTCCATCCT +
Preference number: 4 (lower is better)
Translates to: QIPLSPLPTMPNQGQSLTLGKAP*PQALHP
Trigger: AGGATGGAGGGCCTGTGGGCACGGAGCTTTTCCGAG...AGTGAGGCTCTGCCCTTGGTTAGGCATTGTGGGAAGGGGAGATAAGGGTATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp CAGATACCCTTATCTCCCCTTCCCACAATGCCTAACCAAGGGCAGAGCCTCACTGTTAGGGCAGCAGCCTaGCGGTCCAGATGCTGCATC +
Preference number: 4 (lower is better)
Translates to: QIPLSPLPTMPNQGQSLTVRAAA*RSRCCI
Trigger: GATGCAGCATCTGGACCGCCAGGCTGCTGCCCTAAC...AGTGAGGCTCTGCCCTTGGTTAGGCATTGTGGGAAGGGGAGATAAGGGTATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TGGAAAACATCATGGAAATCCCTGGTCCTGTCTGCGGTGGGGACAAAGGTGAAGCAGAACTCTGCCACGTaGCGGCAGTGGAGACGGGAG +
Preference number: 4 (lower is better)
Translates to: WKTSWKSLVLSAVGTKVKQNSAT*RQWRRE
Trigger: CTCCCGTCTCCACTGCCGCCACGTGGCAGAGTTCTG...CTTCACCTTTGTCCCCACCGCAGACAGGACCAGGGATTTCCATGATGTTTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TGGAAAACATCATGGAAATCCCTGGTCCTGTCTGCGGTGGGGACAAAGGTGAAGCTGGGCCCAGGTTGGTaGGGAGCAGAACTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: WKTSWKSLVLSAVGTKVKLGPGW*GAELCH
Trigger: GTGGCAGAGTTCTGCTCCCCACCAACCTGGGCCCAG...CTTCACCTTTGTCCCCACCGCAGACAGGACCAGGGATTTCCATGATGTTTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TATGTTGGTGGCTTGATGGTGGAACTAGGATCAGAACCCAGCCTTCAGACTCAGCTCAGGCCAGGCCCTTaGGTGGGGGTGGGTATGAGG +
Preference number: 4 (lower is better)
Translates to: YVGGLMVELGSEPSLQTQLRPGP*VGVGMR
Trigger: CCTCATACCCACCCCCACCCAAGGGCCTGGCCTGAG...CTGAGTCTGAAGGCTGGGTTCTGATCCTAGTTCCACCATCAAGCCACCAACATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp CCTCAGGTAGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACTGCTCATGTGTGAGATaGGAGGACTGTAGTACTCAC +
Preference number: 4 (lower is better)
Translates to: PQVDGKGRGQSKGEVSCHCSCVR*EDCSTH
Trigger: GTGAGTACTACAGTCCTCCCATCTCACACATGAGCA...GTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCTACCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TGTGTGAGATGGGAGGACTGTAGTACTCACAGGGCAGCATGGGTCAGAAGGGGCAGGGCAGAGCCTCACTaGAAGCAGTGCCAGGAAACA +
Preference number: 4 (lower is better)
Translates to: CVRWEDCSTHRAAWVRRGRAEPH*KQCQET
Trigger: TGTTTCCTGGCACTGCTTCCAGTGAGGCTCTGCCCT...GCCCCTTCTGACCCATGCTGCCCTGTGAGTACTACAGTCCTCCCATCTCACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TGTCTAAGGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGAAGGGCAGAGCCTCACTaGAAGCAGTGCCAGGAAACA +
Preference number: 4 (lower is better)
Translates to: CLRCSAGKDCEAASRGWRRAEPH*KQCQET
Trigger: TGTTTCCTGGCACTGCTTCCAGTGAGGCTCTGCCCT...TCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACCTTAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp CAGGCCCTGAGCTTCCTGAATATGCTGCGCCACACCCAGCAGGGGAGTGCAGAGGACAAGTTAGTCCATTaGCAGGGACTGTCTAAGGTG +
Preference number: 4 (lower is better)
Translates to: QALSFLNMLRHTQQGSAEDKLVH*QGLSKV
Trigger: CACCTTAGACAGTCCCTGCCAATGGACTAACTTGTC...CTCTGCACTCCCCTGCTGGGTGTGGCGCAGCATATTCAGGAAGCTCAGGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp CCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGGAAGCATCAGGAATGTaGCTGCTCCTGGAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: PASGKNLACVGWDHKGLVEASGM*LLLEPF
Trigger: GAAAGGCTCCAGGAGCAGCCACATTCCTGATGCTTC...CACAAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GTGGGGGTGGGTATGAGGATGAGGGATCCCAGGCAGCTGTCTGAATCAAACAACAGAATCTGGCGTGTGTaGGGTGGGACCACAAGGGTC +
Preference number: 4 (lower is better)
Translates to: VGVGMRMRDPRQLSESNNRIWRV*GGTTRV
Trigger: GACCCTTGTGGTCCCACCCCACACACGCCAGATTCT...GTTGTTTGATTCAGACAGCTGCCTGGGATCCCTCATCCTCATACCCACCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp GGAAGCAGTGCCAGGAAACACCACACTAGCCTCATGCAAGAAAAGACATGTCACGCTGGGGGTCCCTTCTaGGGAGACAGGGACCACAGA +
Preference number: 4 (lower is better)
Translates to: GSSARKHHTSLMQEKTCHAGGPF*GDRDHR
Trigger: TCTGTGGTCCCTGTCTCCTCAGAAGGGACCCCCAGC...GTGACATGTCTTTTCTTGCATGAGGCTAGTGTGGTGTTTCCTGGCACTGCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp CCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGCCTGATGCTCATGTGTaGGATGGGAGGACTGTAGTA +
Preference number: 4 (lower is better)
Translates to: PASGKNLACVGWDHKGLVPDAHV*DGRTVV
Trigger: TACTACAGTCCTCCCATCTCACACATGAGCATCAGG...CACAAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp GTGGGGGTGGGTATGAGGATGAGGGATCCCAGGCAGCTGTCTGAATCAAACAACCCAAGCACCCATCTGTaGAGGAGTGTTCCTAGCACC +
Preference number: 4 (lower is better)
Translates to: VGVGMRMRDPRQLSESNNPSTHL*RSVPST
Trigger: GGTGCTAGGAACACTCCTTCACAGATGGGTGCTTGG...GTTGTTTGATTCAGACAGCTGCCTGGGATCCCTCATCCTCATACCCACCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp GGAAGCAGTGCCAGGAAACACCACACTAGCCTCATGCAAGAAAAGACATGTCACCACTCCCACCCTCTCTaGGCTGCCAGAGTGACCCCA +
Preference number: 4 (lower is better)
Translates to: GSSARKHHTSLMQEKTCHHSHPL*AARVTP
Trigger: TGGGGTCACTCTGGCAGCTCAGAGAGGGTGGGAGTG...GTGACATGTCTTTTCTTGCATGAGGCTAGTGTGGTGTTTCCTGGCACTGCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp TATGTTGGTGGCTTGATGGTGGAACTAGGATCAGAACCCAGCCTTCAGACTCAGCTCCCCAGGCCCTATTaGGTGGAGCCAGGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: YVGGLMVELGSEPSLQTQLPRPY*VEPGGS
Trigger: ACTGCCACCTGGCTCCACTCAATAGGGCCTGGGGAG...CTGAGTCTGAAGGCTGGGTTCTGATCCTAGTTCCACCATCAAGCCACCAACATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR TCA 90 bp TGTGTGAGATGGGAGGACTGTAGTACTCACAGGGCAGCATGGGTCAGAAGGGGCGACAGGAGAATTGCTTaGATCCGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: CVRWEDCSTHRAAWVRRGDRRIA*IREAEV
Trigger: AACCTCTGCCTCCCGGATTCAAGCAATTCTCCTGTC...GCCCCTTCTGACCCATGCTGCCCTGTGAGTACTACAGTCCTCCCATCTCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR TCA 90 bp CAGATACCCTTATCTCCCCTTCCCACAATGCCTAACCAAGGGCAGAGCCTCACTCACCCAAGCCAAAACTaGTCCCCTGTACACCCTGGC +
Preference number: 4 (lower is better)
Translates to: QIPLSPLPTMPNQGQSLTHPSQN*SPVHPG
Trigger: GCCAGGGTGTACAGGGGATCAGTTTTGGCTTGGGTG...AGTGAGGCTCTGCCCTTGGTTAGGCATTGTGGGAAGGGGAGATAAGGGTATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR GCA 90 bp TTGCAGGCCCTCTGGGCCTCAGGGTCCAAAGACAAGTTAGTCCATTGGCAGGGATCTGCTTCTCGAAGGTaGCGCCATTTCGAGTTAGGG +
Preference number: 4 (lower is better)
Translates to: LQALWASGSKDKLVHWQGSASRR*RHFELG
Trigger: CCCTAACTCGAAATGGCGGCACCTTCGAGAAGCAGA...TCCCTGCCAATGGACTAACTTGTCTTTGGACCCTGAGGCCCAGAGGGCCTGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp GTGTTGTCAGGGGGACAGGTATTCCTTACCTCCCTCTTTCCTTTCACAGATGGGTCGGCTCCAGGCTACTaGTTTCGCCTGTGGCTTCGG +
Preference number: 4 (lower is better)
Translates to: VLSGGQVFLTSLFPFTDGSAPGY*FRLWLR
Trigger: CCGAAGCCACAGGCGAAAGCAGTAGCCTGGAGCCGA...CCCATCTGTGAAAGGAAAGAGGGAGGTAAGGAATACCTGTCCCCCTGACAACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp GGAAGCAGTGCCAGGAAACACCACACTAGCCTCATGCAAGAAAAGACATGTCACTGGAAGGCATCCGTGTaGGCTGGCACGGGACCCATC +
Preference number: 4 (lower is better)
Translates to: GSSARKHHTSLMQEKTCHWKASV*AGTGPI
Trigger: GATGGGTCCCGTGCCAGCGCACACGGATGCCTTCCA...GTGACATGTCTTTTCTTGCATGAGGCTAGTGTGGTGTTTCCTGGCACTGCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp CAGGCCCTGAGCTTCCTGAATATGCTGCGCCACACCCAGCAGGGGAGTGCAGAGACCACACTAGCCTCATaGAAGAAAAGACATGTCACC +
Preference number: 4 (lower is better)
Translates to: QALSFLNMLRHTQQGSAETTLAS*KKRHVT
Trigger: GGTGACATGTCTTTTCTTGCATGAGGCTAGTGTGGT...CTCTGCACTCCCCTGCTGGGTGTGGCGCAGCATATTCAGGAAGCTCAGGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp TTGCAGGCCCTCTGGGCCTCAGGGTCCAAAGACAAGTTAGTCCATTGGCAGGGAACAGGGCAGGGTCTGTaGTATCAACTCACTCCCTTG +
Preference number: 4 (lower is better)
Translates to: LQALWASGSKDKLVHWQGTGQGL*YQLTPL
Trigger: CAAGGGAGTGAGTTGATAGCACAGACCCTGCCCTGT...TCCCTGCCAATGGACTAACTTGTCTTTGGACCCTGAGGCCCAGAGGGCCTGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp GTGTTGTCAGGGGGACAGGTATTCCTTACCTCCCTCTTTCCTTTCACAGATGGGAGCCCCATCCAGGCATaGTCGAGCCTTCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: VLSGGQVFLTSLFPFTDGSPIQA*SSLQQP
Trigger: TGGCTGCTGAAGGCTCGAGCATGCCTGGATGGGGCT...CCCATCTGTGAAAGGAAAGAGGGAGGTAAGGAATACCTGTCCCCCTGACAACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp AGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACCAGGGACCTCCTTGTCCATGTCCTaGTTGGAGAAACTAACAAAG +
Preference number: 4 (lower is better)
Translates to: RRQGSGTIQGRGELPPGTSLSMS*LEKLTK
Trigger: CTTTGTTAGTTTCTCCAAGCAGGACATGGACAAGGA...GGTCCCTGGTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp AGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTTTCAAGCGATTCTCCTaGCTCAGACTCCCGAATAGC +
Preference number: 4 (lower is better)
Translates to: SPASGKNLACVGWDHKGLFKRFS*LRLPNS
Trigger: GCTATTCGGGAGTCTGAGGCAGGAGAATCGCTTGAA...AAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR CCA 90 bp TGGAAAACATCATGGAAATCCCTGGTCCTGTCTGCGGTGGGGACAAAGGTGAAGGTTAGGGCAGCAGCCTaGCGGTCCAGATGCTGCATC +
Preference number: 4 (lower is better)
Translates to: WKTSWKSLVLSAVGTKVKVRAAA*RSRCCI
Trigger: GATGCAGCATCTGGACCGCCAGGCTGCTGCCCTAAC...CTTCACCTTTGTCCCCACCGCAGACAGGACCAGGGATTTCCATGATGTTTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp CAGATACCCTTATCTCCCCTTCCCACAATGCCTAACCAAGGGCAGAGCCTCACTTACTGCTTTCGCCTGTaGCTTCGGGCTCCAGGACCA +
Preference number: 4 (lower is better)
Translates to: QIPLSPLPTMPNQGQSLTYCFRL*LRAPGP
Trigger: TGGTCCTGGAGCCCGAAGCCACAGGCGAAAGCAGTA...AGTGAGGCTCTGCCCTTGGTTAGGCATTGTGGGAAGGGGAGATAAGGGTATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TATGTTGGTGGCTTGATGGTGGAACTAGGATCAGAACCCAGCCTTCAGACTCAGCTGGGCCCAGGTTGGTaGGGAGCAGAACTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: YVGGLMVELGSEPSLQTQLGPGW*GAELCH
Trigger: GTGGCAGAGTTCTGCTCCCCACCAACCTGGGCCCAG...CTGAGTCTGAAGGCTGGGTTCTGATCCTAGTTCCACCATCAAGCCACCAACATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GTCCCTTTCAGAAACAAACAGGGGACTCATGGAAAACATCATGGAAATCCCTGGTGGGTGGAGGGGTCCTaGGTGGACGGGGCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: VPFRNKQGTHGKHHGNPWWVEGS*VDGASE
Trigger: CTCTGAGGCCCCGTCCACCCAGGACCCCTCCACCCA...CCAGGGATTTCCATGATGTTTTCCATGAGTCCCCTGTTTGTTTCTGAAAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GTGTTGTCAGGGGGACAGGTATTCCTTACCTCCCTCTTTCCTTTCACAGATGGGGCCTCTGGGGGTCCATaGTGGCATGGATGGGTTCCT +
Preference number: 4 (lower is better)
Translates to: VLSGGQVFLTSLFPFTDGASGGP*WHGWVP
Trigger: AGGAACCCATCCATGCCACCATGGACCCCCAGAGGC...CCCATCTGTGAAAGGAAAGAGGGAGGTAAGGAATACCTGTCCCCCTGACAACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GTGTTGTCAGGGGGACAGGTATTCCTTACCTCCCTCTTTCCTTTCACAGATGGGGGAGAGTTTTGGGGCTaGGGTGAGTTGGGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: VLSGGQVFLTSLFPFTDGGEFWG*GELGGH
Trigger: GTGGCCTCCCAACTCACCCCAGCCCCAAAACTCTCC...CCCATCTGTGAAAGGAAAGAGGGAGGTAAGGAATACCTGTCCCCCTGACAACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TGTCTAAGGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGATCATTGGGGCTGGGATaGCGTCAAAGGGAACCTCTA +
Preference number: 4 (lower is better)
Translates to: CLRCSAGKDCEAASRGWRSLGLG*RQREPL
Trigger: TAGAGGTTCCCTTTGACGCCATCCCAGCCCCAATGA...TCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACCTTAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GGAAGCAGTGCCAGGAAACACCACACTAGCCTCATGCAAGAAAAGACATGTCACCCCTTGCAGGCCCTCTaGGCCTCAGGGTCCAAAGAC +
Preference number: 4 (lower is better)
Translates to: GSSARKHHTSLMQEKTCHPLQAL*ASGSKD
Trigger: GTCTTTGGACCCTGAGGCCCAGAGGGCCTGCAAGGG...GTGACATGTCTTTTCTTGCATGAGGCTAGTGTGGTGTTTCCTGGCACTGCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp CCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGTCATCTTGCTGCACGTaGTGTTGCATTTCGTCACAC +
Preference number: 4 (lower is better)
Translates to: PASGKNLACVGWDHKGLVSSCCT*CCISSH
Trigger: GTGTGACGAAATGCAACATCACGTGCAGCAAGATGA...CACAAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp GGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGAGAAGGGCTCTGTTGATAGTGGATaGGCAAAGCTACAGGTATCT +
Preference number: 4 (lower is better)
Translates to: GALLVRTVRLHPGAGEKGSVDSG*AKLQVS
Trigger: AGATACCTGTAGCTTTGCTCATCCACTATCAACAGA...GCCCTTCTCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp GGGAGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTTCTGTTGATAGTGGATaGGCAAAGCTACAGGTATCT +
Preference number: 4 (lower is better)
Translates to: GSPASGKNLACVGWDHKGSVDSG*AKLQVS
Trigger: AGATACCTGTAGCTTTGCTCATCCACTATCAACAGA...ACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp GTCCCTTTCAGAAACAAACAGGGGACTCATGGAAAACATCATGGAAATCCCTGGCAGAGACGTGGGCCATaGTGCCAGGCCCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: VPFRNKQGTHGKHHGNPWQRRGP*CQAPSP
Trigger: AGGACTGGGGGCCTGGCAGCATGGCCCACGTCTCTG...CCAGGGATTTCCATGATGTTTTCCATGAGTCCCCTGTTTGTTTCTGAAAGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp TATGTTGGTGGCTTGATGGTGGAACTAGGATCAGAACCCAGCCTTCAGACTCAGCTCCGCCATCTCTCCTaGCATCTTTCGAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: YVGGLMVELGSEPSLQTQLRHLS*HLSRAA
Trigger: GGCTGCCCTCGAAAGATGGCAGGAGAGATGGCGGAG...CTGAGTCTGAAGGCTGGGTTCTGATCCTAGTTCCACCATCAAGCCACCAACATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp TTGCAGGCCCTCTGGGCCTCAGGGTCCAAAGACAAGTTAGTCCATTGGCAGGGAAGGGACTGTCTAAGGTaGTCTGCTGGTAAGGACTGT +
Preference number: 4 (lower is better)
Translates to: LQALWASGSKDKLVHWQGRDCLR*SAGKDC
Trigger: ACAGTCCTTACCAGCAGAGCACCTTAGACAGTCCCT...TCCCTGCCAATGGACTAACTTGTCTTTGGACCCTGAGGCCCAGAGGGCCTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp CAGATACCCTTATCTCCCCTTCCCACAATGCCTAACCAAGGGCAGAGCCTCACTGGATGGTCTCTGCTCTaGCCATTTCCATTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: QIPLSPLPTMPNQGQSLTGWSLL*PFPFGG
Trigger: GCCCCCAAATGGAAATGGGCAGAGCAGAGACCATCC...AGTGAGGCTCTGCCCTTGGTTAGGCATTGTGGGAAGGGGAGATAAGGGTATCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp TGGAAAACATCATGGAAATCCCTGGTCCTGTCTGCGGTGGGGACAAAGGTGAAGGTCTTGTGGCCTGGCTaGCTGCAGGAGTCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: WKTSWKSLVLSAVGTKVKVLWPG*LQESLK
Trigger: CTTCAGAGACTCCTGCAGGCAGCCAGGCCACAAGAC...CTTCACCTTTGTCCCCACCGCAGACAGGACCAGGGATTTCCATGATGTTTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GGAAGCAGTGCCAGGAAACACCACACTAGCCTCATGCAAGAAAAGACATGTCACCTCCAGAGAGTTCTCTaGCCTGGGGCTCTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: GSSARKHHTSLMQEKTCHLQRVL*PGALSL
Trigger: CAGGGACAGAGCCCCAGGCCAGAGAACTCTCTGGAG...GTGACATGTCTTTTCTTGCATGAGGCTAGTGTGGTGTTTCCTGGCACTGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp CAGATACCCTTATCTCCCCTTCCCACAATGCCTAACCAAGGGCAGAGCCTCACTGGGTCCATGGTGGCATaGATGGGTTCCTCAGCCTTA +
Preference number: 4 (lower is better)
Translates to: QIPLSPLPTMPNQGQSLTGSMVA*MGSSAL
Trigger: TAAGGCTGAGGAACCCATCCATGCCACCATGGACCC...AGTGAGGCTCTGCCCTTGGTTAGGCATTGTGGGAAGGGGAGATAAGGGTATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TATGTTGGTGGCTTGATGGTGGAACTAGGATCAGAACCCAGCCTTCAGACTCAGTCACCAGTGGGGGCGTaGGCTCTGTACAGAGGATGG +
Preference number: 4 (lower is better)
Translates to: YVGGLMVELGSEPSLQTQSPVGA*ALYRGW
Trigger: CCATCCTCTGTACAGAGCCCACGCCCCCACTGGTGA...CTGAGTCTGAAGGCTGGGTTCTGATCCTAGTTCCACCATCAAGCCACCAACATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GGAAGCAGTGCCAGGAAACACCACACTAGCCTCATGCAAGAAAAGACATGTCACACCACAAGGGTCTTGTaGCCTGGCTGCCTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: GSSARKHHTSLMQEKTCHTTRVL*PGCLQE
Trigger: CTCCTGCAGGCAGCCAGGCCACAAGACCCTTGTGGT...GTGACATGTCTTTTCTTGCATGAGGCTAGTGTGGTGTTTCCTGGCACTGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GTGGGGGTGGGTATGAGGATGAGGGATCCCAGGCAGCTGTCTGAATCAAACAACAAGGCTCTCCCAGCCTaGAAGAGCCAGAACAAAGTG +
Preference number: 4 (lower is better)
Translates to: VGVGMRMRDPRQLSESNNKALPA*KSQNKV
Trigger: CACTTTGTTCTGGCTCTTCCAGGCTGGGAGAGCCTT...GTTGTTTGATTCAGACAGCTGCCTGGGATCCCTCATCCTCATACCCACCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp CCTCAGGTAGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACGTTGGTGATGAGGGTTaGAAAAGTCTTTCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: PQVDGKGRGQSKGEVSCHVGDEG*KSLSKV
Trigger: GACTTTGGAAAGACTTTTCCAACCCTCATCACCAAC...GTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCTACCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp ACCCAGCCCATAAGAGGCCCCTCAGGTAGACGGCAAGGGTCGGGGACAATCCAAAACCTCCGGAATAGCTaGGATTACAGATGTAAGCCA +
Preference number: 4 (lower is better)
Translates to: TQPIRGPSGRRQGSGTIQNLRNS*DYRCKP
Trigger: TGGCTTACATCTGTAATCCCAGCTATTCCGGAGGTT...TTGGATTGTCCCCGACCCTTGCCGTCTACCTGAGGGGCCTCTTATGGGCTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR TCA 90 bp TGTCTAAGGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGATCCCAGGCAGCTGTCTaGATCAAACAACTAGACACA +
Preference number: 4 (lower is better)
Translates to: CLRCSAGKDCEAASRGWRSQAAV*IKQLDT
Trigger: TGTGTCTAGTTGTTTGATTCAGACAGCTGCCTGGGA...TCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACCTTAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp TTGCAGGCCCTCTGGGCCTCAGGGTCCAAAGACAAGTTAGTCCATTGGCAGGGATCCCAGGCAGCTGTCTaGATCAAACAACTAGACACA +
Preference number: 4 (lower is better)
Translates to: LQALWASGSKDKLVHWQGSQAAV*IKQLDT
Trigger: TGTGTCTAGTTGTTTGATTCAGACAGCTGCCTGGGA...TCCCTGCCAATGGACTAACTTGTCTTTGGACCCTGAGGCCCAGAGGGCCTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp CAGATACCCTTATCTCCCCTTCCCACAATGCCTAACCAAGGGCAGAGCCTCACTCCCGAGAGCAGTTGCTaGAAGGTACTGAGTCATCCT +
Preference number: 4 (lower is better)
Translates to: QIPLSPLPTMPNQGQSLTPESSC*KVLSHP
Trigger: AGGATGACTCAGTACCTTTCAGCAACTGCTCTCGGG...AGTGAGGCTCTGCCCTTGGTTAGGCATTGTGGGAAGGGGAGATAAGGGTATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR TCA 90 bp TTGCAGGCCCTCTGGGCCTCAGGGTCCAAAGACAAGTTAGTCCATTGGCAGGGACTGAGGTCAGGAGTTTaGGACCAGCCTGATCAATAT +
Preference number: 4 (lower is better)
Translates to: LQALWASGSKDKLVHWQGLRSGV*DQPDQY
Trigger: ATATTGATCAGGCTGGTCTCAAACTCCTGACCTCAG...TCCCTGCCAATGGACTAACTTGTCTTTGGACCCTGAGGCCCAGAGGGCCTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR GCA 90 bp CAGATACCCTTATCTCCCCTTCCCACAATGCCTAACCAAGGGCAGAGCCTCACTTCTGCTTCTCGAAGGTaGCGCCATTTCGAGTTAGGG +
Preference number: 4 (lower is better)
Translates to: QIPLSPLPTMPNQGQSLTSASRR*RHFELG
Trigger: CCCTAACTCGAAATGGCGGCACCTTCGAGAAGCAGA...AGTGAGGCTCTGCCCTTGGTTAGGCATTGTGGGAAGGGGAGATAAGGGTATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp GGAAGCAGTGCCAGGAAACACCACACTAGCCTCATGCAAGAAAAGACATGTCACGAGACACAATCAGGTTaGAGGGAGTGGGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: GSSARKHHTSLMQEKTCHETQSG*REWAEG
Trigger: GCCCTCTGCCCACTCCCTGCAACCTGATTGTGTCTC...GTGACATGTCTTTTCTTGCATGAGGCTAGTGTGGTGTTTCCTGGCACTGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp TATGTTGGTGGCTTGATGGTGGAACTAGGATCAGAACCCAGCCTTCAGACTCAGCTCCCCTTCCCACAATaGCTAACCAAGGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: YVGGLMVELGSEPSLQTQLPFPQ*LTKGRA
Trigger: GGCTCTGCCCTTGGTTAGGCATTGTGGGAAGGGGAG...CTGAGTCTGAAGGCTGGGTTCTGATCCTAGTTCCACCATCAAGCCACCAACATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp TGTGTGAGATGGGAGGACTGTAGTACTCACAGGGCAGCATGGGTCAGAAGGGGCGAACCCCTGACTTTATaGCTACAACTTCCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: CVRWEDCSTHRAAWVRRGEPLTL*LQLPLS
Trigger: GGAAAGGGGAAGTTGTAGGCATAAAGTCAGGGGTTC...GCCCCTTCTGACCCATGCTGCCCTGTGAGTACTACAGTCCTCCCATCTCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp GTGGGGGTGGGTATGAGGATGAGGGATCCCAGGCAGCTGTCTGAATCAAACAACAGGCACATGCACGCTTaGACACACAGAGAGACTTTG +
Preference number: 4 (lower is better)
Translates to: VGVGMRMRDPRQLSESNNRHMHA*THRETL
Trigger: CAAAGTCTCTCTGTGTGTGCAAGCGTGCATGTGCCT...GTTGTTTGATTCAGACAGCTGCCTGGGATCCCTCATCCTCATACCCACCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR GCA 90 bp GGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGAGAAGGGCACATATATGTGGCCATaGAAACATACACCACTTTCC +
Preference number: 4 (lower is better)
Translates to: GALLVRTVRLHPGAGEKGTYMWP*KHTPLS
Trigger: GGAAAGTGGTGTATGTTTGCATGGCCACATATATGT...GCCCTTCTCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR GCA 90 bp CAAGGCTGGCCTCCTGGGGAATGCCTGGGAGCTTGGAGCTTGTGCACCTGGAGGCACCAGAACACGAACTaGTCATGCATAAATATTTAC +
Preference number: 4 (lower is better)
Translates to: QGWPPGECLGAWSLCTWRHQNTN*SCINIY
Trigger: GTAAATATTTATGCATGAGCAGTTCGTGTTCTGGTG...CCTCCAGGTGCACAAGCTCCAAGCTCCCAGGCATTCCCCAGGAGGCCAGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR CCA 90 bp GTCCCTTTCAGAAACAAACAGGGGACTCATGGAAAACATCATGGAAATCCCTGGAGGCTGGGCCCAGGTTaGTGGGGAGCAGAACTCTGC +
Preference number: 4 (lower is better)
Translates to: VPFRNKQGTHGKHHGNPWRLGPG*WGAELC
Trigger: GCAGAGTTCTGCTCCCCACCAACCTGGGCCCAGCCT...CCAGGGATTTCCATGATGTTTTCCATGAGTCCCCTGTTTGTTTCTGAAAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GTCCCTTTCAGAAACAAACAGGGGACTCATGGAAAACATCATGGAAATCCCTGGCCCTTGCAGGCCCTCTaGGCCTCAGGGTCCAAAGAC +
Preference number: 4 (lower is better)
Translates to: VPFRNKQGTHGKHHGNPWPLQAL*ASGSKD
Trigger: GTCTTTGGACCCTGAGGCCCAGAGGGCCTGCAAGGG...CCAGGGATTTCCATGATGTTTTCCATGAGTCCCCTGTTTGTTTCTGAAAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TATGTTGGTGGCTTGATGGTGGAACTAGGATCAGAACCCAGCCTTCAGACTCAGAGAATCTGGCGTGTGTaGGGTGGGACCACAAGGGTC +
Preference number: 4 (lower is better)
Translates to: YVGGLMVELGSEPSLQTQRIWRV*GGTTRV
Trigger: GACCCTTGTGGTCCCACCCCACACACGCCAGATTCT...CTGAGTCTGAAGGCTGGGTTCTGATCCTAGTTCCACCATCAAGCCACCAACATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp ACCCAGCCCATAAGAGGCCCCTCAGGTAGACGGCAAGGGTCGGGGACAATCCAACAAACAGGGGACTCATaGAAAACATCATGGAAATCC +
Preference number: 4 (lower is better)
Translates to: TQPIRGPSGRRQGSGTIQQTGDS*KTSWKS
Trigger: GGATTTCCATGATGTTTTCCATGAGTCCCCTGTTTG...TTGGATTGTCCCCGACCCTTGCCGTCTACCTGAGGGGCCTCTTATGGGCTGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GTGGGGGTGGGTATGAGGATGAGGGATCCCAGGCAGCTGTCTGAATCAAACAACTCTATGGACCAGAGCTaGGTTTCCTTCCTCCAAGCA +
Preference number: 4 (lower is better)
Translates to: VGVGMRMRDPRQLSESNNSMDQS*VSFLQA
Trigger: TGCTTGGAGGAAGGAAACCCAGCTCTGGTCCATAGA...GTTGTTTGATTCAGACAGCTGCCTGGGATCCCTCATCCTCATACCCACCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TGGAAAACATCATGGAAATCCCTGGTCCTGTCTGCGGTGGGGACAAAGGTGAAGTTGAGTGGAGCCAGGTaGCAGTCCCCTAAAATGGCC +
Preference number: 4 (lower is better)
Translates to: WKTSWKSLVLSAVGTKVKLSGAR*QSPKMA
Trigger: GGCCATTTTAGGGGACTGCCACCTGGCTCCACTCAA...CTTCACCTTTGTCCCCACCGCAGACAGGACCAGGGATTTCCATGATGTTTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR CCA 90 bp GTGTTGTCAGGGGGACAGGTATTCCTTACCTCCCTCTTTCCTTTCACAGATGGGTGCTTTGTGGGAAGGTaGTTTAGGGCCGGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: VLSGGQVFLTSLFPFTDGCFVGR*FRAGRS
Trigger: AGACCTGCCGGCCCTAAACCACCTTCCCACAAAGCA...CCCATCTGTGAAAGGAAAGAGGGAGGTAAGGAATACCTGTCCCCCTGACAACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR CCA 90 bp TGTGTGAGATGGGAGGACTGTAGTACTCACAGGGCAGCATGGGTCAGAAGGGGCGGTTTTGCAAACATCTaGAGACCAGGGCAGTCAAGA +
Preference number: 4 (lower is better)
Translates to: CVRWEDCSTHRAAWVRRGGFANI*RPGQSR
Trigger: TCTTGACTGCCCTGGTCTCCAGATGTTTGCAAAACC...GCCCCTTCTGACCCATGCTGCCCTGTGAGTACTACAGTCCTCCCATCTCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR TCA 90 bp GTGTTGTCAGGGGGACAGGTATTCCTTACCTCCCTCTTTCCTTTCACAGATGGGTGCGCGTTTGCCGCATaGTGCCTGGTTCTGTTGATA +
Preference number: 4 (lower is better)
Translates to: VLSGGQVFLTSLFPFTDGCAFAA*CLVLLI
Trigger: TATCAACAGAACCAGGCATCATGCGGCAAACGCGCA...CCCATCTGTGAAAGGAAAGAGGGAGGTAAGGAATACCTGTCCCCCTGACAACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp GGAAGCAGTGCCAGGAAACACCACACTAGCCTCATGCAAGAAAAGACATGTCACCCAAGCACCCATCTGTaGAGGAGTGTTCCTAGCACC +
Preference number: 4 (lower is better)
Translates to: GSSARKHHTSLMQEKTCHPSTHL*RSVPST
Trigger: GGTGCTAGGAACACTCCTTCACAGATGGGTGCTTGG...GTGACATGTCTTTTCTTGCATGAGGCTAGTGTGGTGTTTCCTGGCACTGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp GTCCCTTTCAGAAACAAACAGGGGACTCATGGAAAACATCATGGAAATCCCTGGCTCGGAAAAGCTCCGTaGCCACAGGCCCTCCATCCT +
Preference number: 4 (lower is better)
Translates to: VPFRNKQGTHGKHHGNPWLGKAP*PQALHP
Trigger: AGGATGGAGGGCCTGTGGGCACGGAGCTTTTCCGAG...CCAGGGATTTCCATGATGTTTTCCATGAGTCCCCTGTTTGTTTCTGAAAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp TGTCTAAGGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGAACCACACTAGCCTCATaGAAGAAAAGACATGTCACC +
Preference number: 4 (lower is better)
Translates to: CLRCSAGKDCEAASRGWRTTLAS*KKRHVT
Trigger: GGTGACATGTCTTTTCTTGCATGAGGCTAGTGTGGT...TCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACCTTAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp GTGTTGTCAGGGGGACAGGTATTCCTTACCTCCCTCTTTCCTTTCACAGATGGGACAGGGCAGGGTCTGTaGTATCAACTCACTCCCTTG +
Preference number: 4 (lower is better)
Translates to: VLSGGQVFLTSLFPFTDGTGQGL*YQLTPL
Trigger: CAAGGGAGTGAGTTGATAGCACAGACCCTGCCCTGT...CCCATCTGTGAAAGGAAAGAGGGAGGTAAGGAATACCTGTCCCCCTGACAACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp TATGTTGGTGGCTTGATGGTGGAACTAGGATCAGAACCCAGCCTTCAGACTCAGGGATGGTCTCTGCTCTaGCCATTTCCATTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: YVGGLMVELGSEPSLQTQGWSLL*PFPFGG
Trigger: GCCCCCAAATGGAAATGGGCAGAGCAGAGACCATCC...CTGAGTCTGAAGGCTGGGTTCTGATCCTAGTTCCACCATCAAGCCACCAACATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp GTGGGGGTGGGTATGAGGATGAGGGATCCCAGGCAGCTGTCTGAATCAAACAACTTCAGGGATGGTCTCTaGTCTGCCCATTTCCATTTG +
Preference number: 4 (lower is better)
Translates to: VGVGMRMRDPRQLSESNNFRDGL*SAHFHL
Trigger: CAAATGGAAATGGGCAGAGCAGAGACCATCCCTGAA...GTTGTTTGATTCAGACAGCTGCCTGGGATCCCTCATCCTCATACCCACCCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp TATGTTGGTGGCTTGATGGTGGAACTAGGATCAGAACCCAGCCTTCAGACTCAGATCCCTGGTCCTGTCTaGGGTGGGGACAAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: YVGGLMVELGSEPSLQTQIPGPV*GGDKGE
Trigger: TTCACCTTTGTCCCCACCGCAGACAGGACCAGGGAT...CTGAGTCTGAAGGCTGGGTTCTGATCCTAGTTCCACCATCAAGCCACCAACATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp GGAAGCAGTGCCAGGAAACACCACACTAGCCTCATGCAAGAAAAGACATGTCACATCCCTGGTCCTGTCTaGGGTGGGGACAAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: GSSARKHHTSLMQEKTCHIPGPV*GGDKGE
Trigger: TTCACCTTTGTCCCCACCGCAGACAGGACCAGGGAT...GTGACATGTCTTTTCTTGCATGAGGCTAGTGTGGTGTTTCCTGGCACTGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp GTGGGGGTGGGTATGAGGATGAGGGATCCCAGGCAGCTGTCTGAATCAAACAACGAACCCCTGACTTTATaGCTACAACTTCCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: VGVGMRMRDPRQLSESNNEPLTL*LQLPLS
Trigger: GGAAAGGGGAAGTTGTAGGCATAAAGTCAGGGGTTC...GTTGTTTGATTCAGACAGCTGCCTGGGATCCCTCATCCTCATACCCACCCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp GGAAGCAGTGCCAGGAAACACCACACTAGCCTCATGCAAGAAAAGACATGTCACGGCAGCACAGCGTCTTaGTCTCTATGGACCAGAGCT +
Preference number: 4 (lower is better)
Translates to: GSSARKHHTSLMQEKTCHGSTAS*SLWTRA
Trigger: AGCTCTGGTCCATAGAGAGCAAGACGCTGTGCTGCC...GTGACATGTCTTTTCTTGCATGAGGCTAGTGTGGTGTTTCCTGGCACTGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp TGGAAAACATCATGGAAATCCCTGGTCCTGTCTGCGGTGGGGACAAAGGTGAAGGGAGGCAAGGGAGGCTaGCCAATGGATAGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: WKTSWKSLVLSAVGTKVKGGKGG*PMDRKE
Trigger: TTCTTTCCTATCCATTGGGCAGCCTCCCTTGCCTCC...CTTCACCTTTGTCCCCACCGCAGACAGGACCAGGGATTTCCATGATGTTTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR GCA 90 bp TGGAAAACATCATGGAAATCCCTGGTCCTGTCTGCGGTGGGGACAAAGGTGAAGGACCCCAGAGGGTTTTaGAAACATCTGGAGACCAGG +
Preference number: 4 (lower is better)
Translates to: WKTSWKSLVLSAVGTKVKDPRGF*KHLETR
Trigger: CCTGGTCTCCAGATGTTTGCAAAACCCTCTGGGGTC...CTTCACCTTTGTCCCCACCGCAGACAGGACCAGGGATTTCCATGATGTTTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR CCA 90 bp TATGTTGGTGGCTTGATGGTGGAACTAGGATCAGAACCCAGCCTTCAGACTCAGAGGGCAGAGCCTCACTaGAAGCAGTGCCAGGAAACA +
Preference number: 4 (lower is better)
Translates to: YVGGLMVELGSEPSLQTQRAEPH*KQCQET
Trigger: TGTTTCCTGGCACTGCTTCCAGTGAGGCTCTGCCCT...CTGAGTCTGAAGGCTGGGTTCTGATCCTAGTTCCACCATCAAGCCACCAACATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GTGGGGGTGGGTATGAGGATGAGGGATCCCAGGCAGCTGTCTGAATCAAACAACGACAAGTTAGTCCATTaGCAGGGACTGTCTAAGGTG +
Preference number: 4 (lower is better)
Translates to: VGVGMRMRDPRQLSESNNDKLVH*QGLSKV
Trigger: CACCTTAGACAGTCCCTGCCAATGGACTAACTTGTC...GTTGTTTGATTCAGACAGCTGCCTGGGATCCCTCATCCTCATACCCACCCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GTCCCTTTCAGAAACAAACAGGGGACTCATGGAAAACATCATGGAAATCCCTGGACCACAAGGGTCTTGTaGCCTGGCTGCCTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: VPFRNKQGTHGKHHGNPWTTRVL*PGCLQE
Trigger: CTCCTGCAGGCAGCCAGGCCACAAGACCCTTGTGGT...CCAGGGATTTCCATGATGTTTTCCATGAGTCCCCTGTTTGTTTCTGAAAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TGGAAAACATCATGGAAATCCCTGGTCCTGTCTGCGGTGGGGACAAAGGTGAAGAAGGCTCTCCCAGCCTaGAAGAGCCAGAACAAAGTG +
Preference number: 4 (lower is better)
Translates to: WKTSWKSLVLSAVGTKVKKALPA*KSQNKV
Trigger: CACTTTGTTCTGGCTCTTCCAGGCTGGGAGAGCCTT...CTTCACCTTTGTCCCCACCGCAGACAGGACCAGGGATTTCCATGATGTTTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp GTGTTGTCAGGGGGACAGGTATTCCTTACCTCCCTCTTTCCTTTCACAGATGGGCCTGATGCTCATGTGTaGGATGGGAGGACTGTAGTA +
Preference number: 4 (lower is better)
Translates to: VLSGGQVFLTSLFPFTDGPDAHV*DGRTVV
Trigger: TACTACAGTCCTCCCATCTCACACATGAGCATCAGG...CCCATCTGTGAAAGGAAAGAGGGAGGTAAGGAATACCTGTCCCCCTGACAACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp GGAAGCAGTGCCAGGAAACACCACACTAGCCTCATGCAAGAAAAGACATGTCACAGTGTTTTCAAGGAGTaGGAGAGGTGGGAAGGGAGC +
Preference number: 4 (lower is better)
Translates to: GSSARKHHTSLMQEKTCHSVFKE*ERWEGS
Trigger: GCTCCCTTCCCACCTCTCTCACTCCTTGAAAACACT...GTGACATGTCTTTTCTTGCATGAGGCTAGTGTGGTGTTTCCTGGCACTGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp GGAAGCAGTGCCAGGAAACACCACACTAGCCTCATGCAAGAAAAGACATGTCACAGGCAGAGGTTGCAGTaGGCTGAGATCATACCACTG +
Preference number: 4 (lower is better)
Translates to: GSSARKHHTSLMQEKTCHRQRLQ*AEIIPL
Trigger: CAGTGGTATGATCTCAGCTCACTGCAACCTCTGCCT...GTGACATGTCTTTTCTTGCATGAGGCTAGTGTGGTGTTTCCTGGCACTGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR GCA 90 bp GTCCCTTTCAGAAACAAACAGGGGACTCATGGAAAACATCATGGAAATCCCTGGTTCACCTCGCCGATCTaGTTCTCGAAGGTGCCGCCA +
Preference number: 4 (lower is better)
Translates to: VPFRNKQGTHGKHHGNPWFTSPI*FSKVPP
Trigger: TGGCGGCACCTTCGAGAAGCAGATCGGCGAGGTGAA...CCAGGGATTTCCATGATGTTTTCCATGAGTCCCCTGTTTGTTTCTGAAAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp GTCCCTTTCAGAAACAAACAGGGGACTCATGGAAAACATCATGGAAATCCCTGGCTCCCCTTCCCACAATaGCTAACCAAGGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: VPFRNKQGTHGKHHGNPWLPFPQ*LTKGRA
Trigger: GGCTCTGCCCTTGGTTAGGCATTGTGGGAAGGGGAG...CCAGGGATTTCCATGATGTTTTCCATGAGTCCCCTGTTTGTTTCTGAAAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp TGTCTAAGGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGATCCTTGTCCATGTCCTaGTTGGAGAAACTAACAAAG +
Preference number: 4 (lower is better)
Translates to: CLRCSAGKDCEAASRGWRSLSMS*LEKLTK
Trigger: CTTTGTTAGTTTCTCCAAGCAGGACATGGACAAGGA...TCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACCTTAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp TTGCAGGCCCTCTGGGCCTCAGGGTCCAAAGACAAGTTAGTCCATTGGCAGGGATCCTTGTCCATGTCCTaGTTGGAGAAACTAACAAAG +
Preference number: 4 (lower is better)
Translates to: LQALWASGSKDKLVHWQGSLSMS*LEKLTK
Trigger: CTTTGTTAGTTTCTCCAAGCAGGACATGGACAAGGA...TCCCTGCCAATGGACTAACTTGTCTTTGGACCCTGAGGCCCAGAGGGCCTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp CAGATACCCTTATCTCCCCTTCCCACAATGCCTAACCAAGGGCAGAGCCTCACTCTGAGATCATACCACTaGACTAAAGCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: QIPLSPLPTMPNQGQSLTLRSYH*TKAWVT
Trigger: TGTCACCCAGGCTTTAGTGCAGTGGTATGATCTCAG...AGTGAGGCTCTGCCCTTGGTTAGGCATTGTGGGAAGGGGAGATAAGGGTATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR GCA 90 bp GTGTTGTCAGGGGGACAGGTATTCCTTACCTCCCTCTTTCCTTTCACAGATGGGCTGAGACAGGAGAATTaGTTGAATCCGGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: VLSGGQVFLTSLFPFTDGLRQEN*LNPGGR
Trigger: TCTGCCTCCCGGATTCAAGCAATTCTCCTGTCTCAG...CCCATCTGTGAAAGGAAAGAGGGAGGTAAGGAATACCTGTCCCCCTGACAACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR GCA 90 bp TATGTTGGTGGCTTGATGGTGGAACTAGGATCAGAACCCAGCCTTCAGACTCAGCCTGGCATGATGGTGTaGACCTTTAGTCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: YVGGLMVELGSEPSLQTQPGMMV*TFSPSY
Trigger: GTAGCTGGGACTAAAGGTGCACACCATCATGCCAGG...CTGAGTCTGAAGGCTGGGTTCTGATCCTAGTTCCACCATCAAGCCACCAACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR CCA 90 bp TGGAAAACATCATGGAAATCCCTGGTCCTGTCTGCGGTGGGGACAAAGGTGAAGATTGTTCATTGGGGCTaGGATGGCGTCAAAGGGAAC +
Preference number: 4 (lower is better)
Translates to: WKTSWKSLVLSAVGTKVKIVHWG*DGVKGN
Trigger: GTTCCCTTTGACGCCATCCCAGCCCCAATGAACAAT...CTTCACCTTTGTCCCCACCGCAGACAGGACCAGGGATTTCCATGATGTTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GTGTTGTCAGGGGGACAGGTATTCCTTACCTCCCTCTTTCCTTTCACAGATGGGATTGTTCATTGGGGCTaGGATGGCGTCAAAGGGAAC +
Preference number: 4 (lower is better)
Translates to: VLSGGQVFLTSLFPFTDGIVHWG*DGVKGN
Trigger: GTTCCCTTTGACGCCATCCCAGCCCCAATGAACAAT...CCCATCTGTGAAAGGAAAGAGGGAGGTAAGGAATACCTGTCCCCCTGACAACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp CAGATACCCTTATCTCCCCTTCCCACAATGCCTAACCAAGGGCAGAGCCTCACTCAGATGGGAGTATGTTaGTGGCTTGATGGTGGAACT +
Preference number: 4 (lower is better)
Translates to: QIPLSPLPTMPNQGQSLTQMGVC*WLDGGT
Trigger: AGTTCCACCATCAAGCCACCAACATACTCCCATCTG...AGTGAGGCTCTGCCCTTGGTTAGGCATTGTGGGAAGGGGAGATAAGGGTATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TGTCTAAGGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGACAAACAGGGGACTCATaGAAAACATCATGGAAATCC +
Preference number: 4 (lower is better)
Translates to: CLRCSAGKDCEAASRGWRQTGDS*KTSWKS
Trigger: GGATTTCCATGATGTTTTCCATGAGTCCCCTGTTTG...TCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACCTTAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GGAAGCAGTGCCAGGAAACACCACACTAGCCTCATGCAAGAAAAGACATGTCACGCGTCTTGCTCTCTATaGACCAGAGCTGGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: GSSARKHHTSLMQEKTCHASCSL*TRAGFP
Trigger: AGGAAACCCAGCTCTGGTCCATAGAGAGCAAGACGC...GTGACATGTCTTTTCTTGCATGAGGCTAGTGTGGTGTTTCCTGGCACTGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TATGTTGGTGGCTTGATGGTGGAACTAGGATCAGAACCCAGCCTTCAGACTCAGAAGGCTCTCCCAGCCTaGAAGAGCCAGAACAAAGTG +
Preference number: 4 (lower is better)
Translates to: YVGGLMVELGSEPSLQTQKALPA*KSQNKV
Trigger: CACTTTGTTCTGGCTCTTCCAGGCTGGGAGAGCCTT...CTGAGTCTGAAGGCTGGGTTCTGATCCTAGTTCCACCATCAAGCCACCAACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GGAAGCAGTGCCAGGAAACACCACACTAGCCTCATGCAAGAAAAGACATGTCACGCCCGGCTCAGTTCTTaGTTCTGCCAGGAAGATTGT +
Preference number: 4 (lower is better)
Translates to: GSSARKHHTSLMQEKTCHARLSS*FCQEDC
Trigger: ACAATCTTCCTGGCAGAACCAAGAACTGAGCCGGGC...GTGACATGTCTTTTCTTGCATGAGGCTAGTGTGGTGTTTCCTGGCACTGCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR CCA 90 bp TGGAAAACATCATGGAAATCCCTGGTCCTGTCTGCGGTGGGGACAAAGGTGAAGCACTGCACTAAAGCCTaGGTGACAGAACAAGACTCC +
Preference number: 4 (lower is better)
Translates to: WKTSWKSLVLSAVGTKVKHCTKA*VTEQDS
Trigger: GGAGTCTTGTTCTGTCACCCAGGCTTTAGTGCAGTG...CTTCACCTTTGTCCCCACCGCAGACAGGACCAGGGATTTCCATGATGTTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR CCA 90 bp GTCCCTTTCAGAAACAAACAGGGGACTCATGGAAAACATCATGGAAATCCCTGGCAGCAGGGATGTCTGTaGGCATCTGGCTTCCCAACC +
Preference number: 4 (lower is better)
Translates to: VPFRNKQGTHGKHHGNPWQQGCL*ASGFPT
Trigger: GGTTGGGAAGCCAGATGCCCACAGACATCCCTGCTG...CCAGGGATTTCCATGATGTTTTCCATGAGTCCCCTGTTTGTTTCTGAAAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR CCA 90 bp GTGTTGTCAGGGGGACAGGTATTCCTTACCTCCCTCTTTCCTTTCACAGATGGGGTTCAAAGAGGTTCCTaGTCAGCAGGGATGTCTGTG +
Preference number: 4 (lower is better)
Translates to: VLSGGQVFLTSLFPFTDGVQRGS*SAGMSV
Trigger: CACAGACATCCCTGCTGACCAGGAACCTCTTTGAAC...CCCATCTGTGAAAGGAAAGAGGGAGGTAAGGAATACCTGTCCCCCTGACAACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR GCA 90 bp GTGTTGTCAGGGGGACAGGTATTCCTTACCTCCCTCTTTCCTTTCACAGATGGGTTCAGGGATGGTCTCTaGTCTGCCCATTTCCATTTG +
Preference number: 4 (lower is better)
Translates to: VLSGGQVFLTSLFPFTDGFRDGL*SAHFHL
Trigger: CAAATGGAAATGGGCAGAGCAGAGACCATCCCTGAA...CCCATCTGTGAAAGGAAAGAGGGAGGTAAGGAATACCTGTCCCCCTGACAACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp GTGTTGTCAGGGGGACAGGTATTCCTTACCTCCCTCTTTCCTTTCACAGATGGGTCCCCTAAAATGGCCTaGAGGTGTCTTCTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: VLSGGQVFLTSLFPFTDGSPKMA*RCLLWE
Trigger: TTCCCAAAGAAGACACCTGCAGGCCATTTTAGGGGA...CCCATCTGTGAAAGGAAAGAGGGAGGTAAGGAATACCTGTCCCCCTGACAACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR CCA 90 bp GTCCCTTTCAGAAACAAACAGGGGACTCATGGAAAACATCATGGAAATCCCTGGGAGATATCGGAGCCATaGCTGAGGGTGGGCAAGAGT +
Preference number: 4 (lower is better)
Translates to: VPFRNKQGTHGKHHGNPWEISEP*LRVGKS
Trigger: ACTCTTGCCCACCCTCAGCCATGGCTCCGATATCTC...CCAGGGATTTCCATGATGTTTTCCATGAGTCCCCTGTTTGTTTCTGAAAGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000006053.7
ENST00000563383.1
CDS-3UTR CCA 90 bp GTCCCTTTCAGAAACAAACAGGGGACTCATGGAAAACATCATGGAAATCCCTGGGGGTCCATGGTGGCATaGATGGGTTCCTCAGCCTTA +
Preference number: 4 (lower is better)
Translates to: VPFRNKQGTHGKHHGNPWGSMVA*MGSSAL
Trigger: TAAGGCTGAGGAACCCATCCATGCCACCATGGACCC...CCAGGGATTTCCATGATGTTTTCCATGAGTCCCCTGTTTGTTTCTGAAAGGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GTGGGGGTGGGTATGAGGATGAGGGATCCCAGGCAGCTGTCTGAATCAAACAACTCATGGAAAACATCATaGAAATCCCTGGTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: VGVGMRMRDPRQLSESNNSWKTS*KSLVLS
Trigger: AGACAGGACCAGGGATTTCCATGATGTTTTCCATGA...GTTGTTTGATTCAGACAGCTGCCTGGGATCCCTCATCCTCATACCCACCCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GGAAGCAGTGCCAGGAAACACCACACTAGCCTCATGCAAGAAAAGACATGTCACAGGGAGGCTGCCCAATaGATAGGAAAGAAGGTCCAT +
Preference number: 4 (lower is better)
Translates to: GSSARKHHTSLMQEKTCHREAAQ*IGKKVH
Trigger: ATGGACCTTCTTTCCTATCCATTGGGCAGCCTCCCT...GTGACATGTCTTTTCTTGCATGAGGCTAGTGTGGTGTTTCCTGGCACTGCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR CCA 90 bp GTGTTGTCAGGGGGACAGGTATTCCTTACCTCCCTCTTTCCTTTCACAGATGGGTGCAGGTGTCTTCTTTaGGAAGCCCCAGAAAATACG +
Preference number: 4 (lower is better)
Translates to: VLSGGQVFLTSLFPFTDGCRCLL*EAPENT
Trigger: CGTATTTTCTGGGGCTTCCCAAAGAAGACACCTGCA...CCCATCTGTGAAAGGAAAGAGGGAGGTAAGGAATACCTGTCCCCCTGACAACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR TCA 90 bp CAGATACCCTTATCTCCCCTTCCCACAATGCCTAACCAAGGGCAGAGCCTCACTTCTGTTGATAGTGGATaGGCAAAGCTACAGGTATCT +
Preference number: 4 (lower is better)
Translates to: QIPLSPLPTMPNQGQSLTSVDSG*AKLQVS
Trigger: AGATACCTGTAGCTTTGCTCATCCACTATCAACAGA...AGTGAGGCTCTGCCCTTGGTTAGGCATTGTGGGAAGGGGAGATAAGGGTATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp GGAAGCAGTGCCAGGAAACACCACACTAGCCTCATGCAAGAAAAGACATGTCACTCCCAGGCAGCTGTCTaGATCAAACAACTAGACACA +
Preference number: 4 (lower is better)
Translates to: GSSARKHHTSLMQEKTCHSQAAV*IKQLDT
Trigger: TGTGTCTAGTTGTTTGATTCAGACAGCTGCCTGGGA...GTGACATGTCTTTTCTTGCATGAGGCTAGTGTGGTGTTTCCTGGCACTGCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp GGAAGCAGTGCCAGGAAACACCACACTAGCCTCATGCAAGAAAAGACATGTCACGTCAAGAGAGCAAGCTaGTCTTATCTAGCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: GSSARKHHTSLMQEKTCHVKRAS*SYLALQ
Trigger: CTGAAGGGCTAGATAAGATCAGCTTGCTCTCTTGAC...GTGACATGTCTTTTCTTGCATGAGGCTAGTGTGGTGTTTCCTGGCACTGCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR GCA 90 bp GGAAGCAGTGCCAGGAAACACCACACTAGCCTCATGCAAGAAAAGACATGTCACTGCCAAACTTCTCTATaGCTCAGTTTCCCCACCTGT +
Preference number: 4 (lower is better)
Translates to: GSSARKHHTSLMQEKTCHCQTSL*LSFPTC
Trigger: ACAGGTGGGGAAACTGAGGCATAGAGAAGTTTGGCA...GTGACATGTCTTTTCTTGCATGAGGCTAGTGTGGTGTTTCCTGGCACTGCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR CCA 90 bp GGAAGCAGTGCCAGGAAACACCACACTAGCCTCATGCAAGAAAAGACATGTCACCAGATGGGAGTATGTTaGTGGCTTGATGGTGGAACT +
Preference number: 4 (lower is better)
Translates to: GSSARKHHTSLMQEKTCHQMGVC*WLDGGT
Trigger: AGTTCCACCATCAAGCCACCAACATACTCCCATCTG...GTGACATGTCTTTTCTTGCATGAGGCTAGTGTGGTGTTTCCTGGCACTGCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TGGAAAACATCATGGAAATCCCTGGTCCTGTCTGCGGTGGGGACAAAGGTGAAGCAAACAGGGGACTCATaGAAAACATCATGGAAATCC +
Preference number: 4 (lower is better)
Translates to: WKTSWKSLVLSAVGTKVKQTGDS*KTSWKS
Trigger: GGATTTCCATGATGTTTTCCATGAGTCCCCTGTTTG...CTTCACCTTTGTCCCCACCGCAGACAGGACCAGGGATTTCCATGATGTTTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp GTGGGGGTGGGTATGAGGATGAGGGATCCCAGGCAGCTGTCTGAATCAAACAACATTTTTAAAATTAAGTaGTCCATTGTGCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: VGVGMRMRDPRQLSESNNIFKIK*SIVQQG
Trigger: CCCCTGCTGCACAATGGACCACTTAATTTTAAAAAT...GTTGTTTGATTCAGACAGCTGCCTGGGATCCCTCATCCTCATACCCACCCCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR CCA 90 bp GTCCCTTTCAGAAACAAACAGGGGACTCATGGAAAACATCATGGAAATCCCTGGGACAAGTTAGTCCATTaGCAGGGACTGTCTAAGGTG +
Preference number: 4 (lower is better)
Translates to: VPFRNKQGTHGKHHGNPWDKLVH*QGLSKV
Trigger: CACCTTAGACAGTCCCTGCCAATGGACTAACTTGTC...CCAGGGATTTCCATGATGTTTTCCATGAGTCCCCTGTTTGTTTCTGAAAGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CCA 90 bp TATGTTGGTGGCTTGATGGTGGAACTAGGATCAGAACCCAGCCTTCAGACTCAGGTTGGTGATGAGGGTTaGAAAAGTCTTTCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: YVGGLMVELGSEPSLQTQVGDEG*KSLSKV
Trigger: GACTTTGGAAAGACTTTTCCAACCCTCATCACCAAC...CTGAGTCTGAAGGCTGGGTTCTGATCCTAGTTCCACCATCAAGCCACCAACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR TCA 90 bp TATGTTGGTGGCTTGATGGTGGAACTAGGATCAGAACCCAGCCTTCAGACTCAGAAACAAGGAAGAGCTTaGGTTTCAGATCTGAGTCAA +
Preference number: 4 (lower is better)
Translates to: YVGGLMVELGSEPSLQTQKQGRA*VSDLSQ
Trigger: TTGACTCAGATCTGAAACTCAAGCTCTTCCTTGTTT...CTGAGTCTGAAGGCTGGGTTCTGATCCTAGTTCCACCATCAAGCCACCAACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR GCA 90 bp GTCCCTTTCAGAAACAAACAGGGGACTCATGGAAAACATCATGGAAATCCCTGGACCACACTAGCCTCATaGAAGAAAAGACATGTCACC +
Preference number: 4 (lower is better)
Translates to: VPFRNKQGTHGKHHGNPWTTLAS*KKRHVT
Trigger: GGTGACATGTCTTTTCTTGCATGAGGCTAGTGTGGT...CCAGGGATTTCCATGATGTTTTCCATGAGTCCCCTGTTTGTTTCTGAAAGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR GCA 90 bp GGAAGCAGTGCCAGGAAACACCACACTAGCCTCATGCAAGAAAAGACATGTCACCTCAGTTCTTGGTTCTaGCAGGAAGATTGTTTAACT +
Preference number: 4 (lower is better)
Translates to: GSSARKHHTSLMQEKTCHLSSWF*QEDCLT
Trigger: AGTTAAACAATCTTCCTGGCAGAACCAAGAACTGAG...GTGACATGTCTTTTCTTGCATGAGGCTAGTGTGGTGTTTCCTGGCACTGCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR CCA 90 bp GTCCCTTTCAGAAACAAACAGGGGACTCATGGAAAACATCATGGAAATCCCTGGTCATGGAAAACATCATaGAAATCCCTGGTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: VPFRNKQGTHGKHHGNPWSWKTS*KSLVLS
Trigger: AGACAGGACCAGGGATTTCCATGATGTTTTCCATGA...CCAGGGATTTCCATGATGTTTTCCATGAGTCCCCTGTTTGTTTCTGAAAGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS TCA 90 bp GGTGGCCAAGCGGAGCAGCCACGACAGAGATATCGGAGCCATGGCTaGGGGTGGGCAAGAGTCCCGGCGGGGGCCAGGCAGGCGGCTAGA +
Preference number: 5 (lower is better)
Translates to: GGQAEQPRQRYRSHG*GWARVPAGARQAAR
Trigger: TCTAGCCGCCTGCCTGGCCCCCGCCGGGACTCTTGCCCACCCTCAGCCATGGCTCCGATATCTCTGTCGTGGCTGCTCCGCTTGGCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000006053.7
ENST00000563383.1
CDS CCA 90 bp AGAAGGTGGCCAAGCGGAGCAGCCACGACAGAGATATCGGAGCCATaGCTGAGGGTGGGCAAGAGTCCCGGCGGGGGCCAGGCAGGCGGC +
Preference number: 5 (lower is better)
Translates to: RRWPSGAATTEISEP*LRVGKSPGGGQAGG
Trigger: GCCGCCTGCCTGGCCCCCGCCGGGACTCTTGCCCACCCTCAGCCATGGCTCCGATATCTCTGTCGTGGCTGCTCCGCTTGGCCACCTTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000564948.1
CDS CCA 90 bp ACAGGGACCACAGAGACGTGGGCCATGCTGCCAGGCCCCCAGTCCTaGAAGGCATCCGTGTGCGCTGGCACGGGACCCATCTCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: TGTTETWAMLPGPQS*KASVCAGTGPISSR
Trigger: GCGGGAGGAGATGGGTCCCGTGCCAGCGCACACGGATGCCTTCCAGGACTGGGGGCCTGGCAGCATGGCCCACGTCTCTGTGGTCCCTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS CCA 90 bp GGCCATGCTGCCAGGCCCCCAGTCCTGGAAGGCATCCGTGTGCGCTaGCACGGGACCCATCTCCTCCCGCTCCAGAGAGTTCTCTGGCCT +
Preference number: 5 (lower is better)
Translates to: GHAARPPVLEGIRVR*HGTHLLPLQRVLWP
Trigger: AGGCCAGAGAACTCTCTGGAGCGGGAGGAGATGGGTCCCGTGCCAGCGCACACGGATGCCTTCCAGGACTGGGGGCCTGGCAGCATGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp CTGTGGCTTCGGGCTCCAGGACCACAGACTCGTCCATTCCCCCGGCGGCAGGGGCGCGTCCTTGACCCATaGCTCCTTCGGGTCGGCACA +
Preference number: 5 (lower is better)
Translates to: LWLRAPGPQTRPFPRRQGRVLDP*LLRVGT
Trigger: TGTGCCGACCCGAAGGAGCAATGGGTCAAGGACGCG...CCCCTGCCGCCGGGGGAATGGACGAGTCTGTGGTCCTGGAGCCCGAAGCCACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564948.1
CDS-3UTR CAA 90 bp ACCACAGACTCGTCCATTCCCCCGGCGGCAGGGGTGGTCCTGGGCTTCACCTCGGAGGCTGGGCCCAGGTaGGTGGGGAGCAGAACTCTG +
Preference number: 5 (lower is better)
Translates to: TTDSSIPPAAGVVLGFTSEAGPR*VGSRTL
Trigger: CAGAGTTCTGCTCCCCACCAACCTGGGCCCAGCCTC...CGAGGTGAAGCCCAGGACCACCCCTGCCGCCGGGGGAATGGACGAGTCTGTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000564948.1
CDS-3UTR CAA 90 bp GCCAGGCCAGCCGGTGCAGCCCCATCCAGGCATGCTCGAGCCTTCAGCAGCCAAGAGGCTGGGCCCAGGTaGGTGGGGAGCAGAACTCTG +
Preference number: 5 (lower is better)
Translates to: ARPAGAAPSRHARAFSSQEAGPR*VGSRTL
Trigger: CAGAGTTCTGCTCCCCACCAACCTGGGCCCAGCCTC...TTGGCTGCTGAAGGCTCGAGCATGCCTGGATGGGGCTGCACCGGCTGGCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS GCA 90 bp ACGTGGGCCATGCTGCCAGGCCCCCAGTCCTGGAAGGCATCCGTGTaGGCTGGCACGGGACCCATCTCCTCCCGCTCCAGAGAGTTCTCT +
Preference number: 5 (lower is better)
Translates to: TWAMLPGPQSWKASV*AGTGPISSRSREFS
Trigger: AGAGAACTCTCTGGAGCGGGAGGAGATGGGTCCCGTGCCAGCGCACACGGATGCCTTCCAGGACTGGGGGCCTGGCAGCATGGCCCACGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS CCA 90 bp TCCCTGCTGGGGGTCCCTTCTGAGGAGACAGGGACCACAGAGACGTaGGCCATGCTGCCAGGCCCCCAGTCCTGGAAGGCATCCGTGTGC +
Preference number: 5 (lower is better)
Translates to: SLLGVPSEETGTTET*AMLPGPQSWKASVC
Trigger: GCACACGGATGCCTTCCAGGACTGGGGGCCTGGCAGCATGGCCCACGTCTCTGTGGTCCCTGTCTCCTCAGAAGGGACCCCCAGCAGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS GCA 90 bp ATTCCCCCGGCGGCAGGGGTGGTCCTGGGCTTCACCTCGCCGATCTaGTTCTCGAAGGTGCCGCCATTTCGAGTTAGGGCAGCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: IPPAAGVVLGFTSPI*FSKVPPFRVRAAAW
Trigger: CCAGGCTGCTGCCCTAACTCGAAATGGCGGCACCTTCGAGAAGCAGATCGGCGAGGTGAAGCCCAGGACCACCCCTGCCGCCGGGGGAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000564948.1
ENST00000565912.1
CDS-3UTR CAA 90 bp CTGCCACGTGGCGGCAGTGGAGACGGGAGGCACTCGGAAAAGCTCCGTGCCCACTGCTGCATCGCGTCCTaGACCCATTGCTCCTTCGGG +
Preference number: 5 (lower is better)
Translates to: LPRGGSGDGRHSEKLRAHCCIAS*THCSFG
Trigger: CCCGAAGGAGCAATGGGTCAAGGACGCGATGCAGCA...GTGGGCACGGAGCTTTTCCGAGTGCCTCCCGTCTCCACTGCCGCCACGTGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564948.1
CDS-3UTR CAA 90 bp AGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACCAGGGACCGGGACCACAAGGGTCTaGTGGCCTGGCTGCCTGCAG +
Preference number: 5 (lower is better)
Translates to: RRQGSGTIQGRGELPPGTGTTRV*WPGCLQ
Trigger: CTGCAGGCAGCCAGGCCACAAGACCCTTGTGGTCCC...GGTCCCTGGTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp GCCAGGCCAGCCGGTGCAGCCCCATCCAGGCATGCTCGAGCCTTCAGCAGCCAAGGGCAGCACAGCGTCTaGCTCTCTATGGACCAGAGC +
Preference number: 5 (lower is better)
Translates to: ARPAGAAPSRHARAFSSQGQHSV*LSMDQS
Trigger: GCTCTGGTCCATAGAGAGCAAGACGCTGTGCTGCCC...TTGGCTGCTGAAGGCTCGAGCATGCCTGGATGGGGCTGCACCGGCTGGCCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp CAAGGCTGGCCTCCTGGGGAATGCCTGGGAGCTTGGAGCTTGTGCACCTGGAGGCCTCCCCAGGCCCTATaGAGTGGAGCCAGGTGGCAG +
Preference number: 5 (lower is better)
Translates to: QGWPPGECLGAWSLCTWRPPQAL*SGARWQ
Trigger: CTGCCACCTGGCTCCACTCAATAGGGCCTGGGGAGG...CCTCCAGGTGCACAAGCTCCAAGCTCCCAGGCATTCCCCAGGAGGCCAGCCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR CAA 90 bp CAAGGCTGGCCTCCTGGGGAATGCCTGGGAGCTTGGAGCTTGTGCACCTGGAGGCGCGTCCTTGACCCATaGCTCCTTCGGGTCGGCACA +
Preference number: 5 (lower is better)
Translates to: QGWPPGECLGAWSLCTWRRVLDP*LLRVGT
Trigger: TGTGCCGACCCGAAGGAGCAATGGGTCAAGGACGCG...CCTCCAGGTGCACAAGCTCCAAGCTCCCAGGCATTCCCCAGGAGGCCAGCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp TGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGGCCTGGCTGCCTGCAGGAGTGCTGCATCGCGTCCTaGACCCATTGCTCCTTCGGG +
Preference number: 5 (lower is better)
Translates to: WRVWGGTTRVLWPGCLQECCIAS*THCSFG
Trigger: CCCGAAGGAGCAATGGGTCAAGGACGCGATGCAGCA...CTCCTGCAGGCAGCCAGGCCACAAGACCCTTGTGGTCCCACCCCACACACGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp AGGGAGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGGGGACCACAAGGGTCTaGTGGCCTGGCTGCCTGCAG +
Preference number: 5 (lower is better)
Translates to: REPSLRKESGVCGVGPQGGTTRV*WPGCLQ
Trigger: CTGCAGGCAGCCAGGCCACAAGACCCTTGTGGTCCC...CCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCTCCCT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS GCA 90 bp CAGGGGTGGTCCTGGGCTTCACCTCGCCGATCTGCTTCTCGAAGGTaGCGCCATTTCGAGTTAGGGCAGCAGCCTGGCGGTCCAGATGCT +
Preference number: 5 (lower is better)
Translates to: QGWSWASPRRSASRR*RHFELGQQPGGPDA
Trigger: AGCATCTGGACCGCCAGGCTGCTGCCCTAACTCGAAATGGCGGCACCTTCGAGAAGCAGATCGGCGAGGTGAAGCCCAGGACCACCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000564948.1
ENST00000565912.1
CDS-3UTR CAA 90 bp CAAGGCTGGCCTCCTGGGGAATGCCTGGGAGCTTGGAGCTTGTGCACCTGGAGGTGCTGCATCGCGTCCTaGACCCATTGCTCCTTCGGG +
Preference number: 5 (lower is better)
Translates to: QGWPPGECLGAWSLCTWRCCIAS*THCSFG
Trigger: CCCGAAGGAGCAATGGGTCAAGGACGCGATGCAGCA...CCTCCAGGTGCACAAGCTCCAAGCTCCCAGGCATTCCCCAGGAGGCCAGCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp ACCCAGCCCATAAGAGGCCCCTCAGGTAGACGGCAAGGGTCGGGGACAATCCAAGAGGCTGGGCCCAGGTaGGTGGGGAGCAGAACTCTG +
Preference number: 5 (lower is better)
Translates to: TQPIRGPSGRRQGSGTIQEAGPR*VGSRTL
Trigger: CAGAGTTCTGCTCCCCACCAACCTGGGCCCAGCCTC...TTGGATTGTCCCCGACCCTTGCCGTCTACCTGAGGGGCCTCTTATGGGCTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp CCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGGCTCAGGCCAGGCCCTaGGGTGGGGGTGGGTATGAG +
Preference number: 5 (lower is better)
Translates to: PASGKNLACVGWDHKGLVAQARP*GGGGYE
Trigger: CTCATACCCACCCCCACCCAAGGGCCTGGCCTGAGC...CACAAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp TGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGGCCTGGCTGCCTGCAGGAGCCAGAACAAAGTGCATaGGGCCCACTCCCACCCTCT +
Preference number: 5 (lower is better)
Translates to: WRVWGGTTRVLWPGCLQEPEQSA*GPLPPS
Trigger: AGAGGGTGGGAGTGGGCCCAATGCACTTTGTTCTGG...CTCCTGCAGGCAGCCAGGCCACAAGACCCTTGTGGTCCCACCCCACACACGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS GCA 90 bp ACCACAGCTCCGGGGGATGTAGCGAAGGCCCTCCGCCATCTCTCCTaGCATCTTTCGAGGGCAGCCCTGGAGGCTCTGGTAGGTGAACAT +
Preference number: 5 (lower is better)
Translates to: TTAPGDVAKALRHLS*HLSRAALEALVGEH
Trigger: ATGTTCACCTACCAGAGCCTCCAGGGCTGCCCTCGAAAGATGGCAGGAGAGATGGCGGAGGGCCTTCGCTACATCCCCCGGAGCTGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS GCA 90 bp CCTGGTCAGCAGGGATGTCTGTGGGCATCTGGCTTCCCAACCCCGTaGCAGATTGTCCCGGCCACACCACCCAAGCCAAAACTGATCCCC +
Preference number: 5 (lower is better)
Translates to: PGQQGCLWASGFPTP*QIVPATPPKPKLIP
Trigger: GGGGATCAGTTTTGGCTTGGGTGGTGTGGCCGGGACAATCTGGCACGGGGTTGGGAAGCCAGATGCCCACAGACATCCCTGCTGACCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR CAA 90 bp GCCAGGCCAGCCGGTGCAGCCCCATCCAGGCATGCTCGAGCCTTCAGCAGCCAATTGCTGCACGTGATGTaGCATTTCGTCACACCGTGG +
Preference number: 5 (lower is better)
Translates to: ARPAGAAPSRHARAFSSQLLHVM*HFVTPW
Trigger: CCACGGTGTGACGAAATGCAACATCACGTGCAGCAA...TTGGCTGCTGAAGGCTCGAGCATGCCTGGATGGGGCTGCACCGGCTGGCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp TGTGTGAGATGGGAGGACTGTAGTACTCACAGGGCAGCATGGGTCAGAAGGGGCGCTCAGGCCAGGCCCTaGGGTGGGGGTGGGTATGAG +
Preference number: 5 (lower is better)
Translates to: CVRWEDCSTHRAAWVRRGAQARP*GGGGYE
Trigger: CTCATACCCACCCCCACCCAAGGGCCTGGCCTGAGC...GCCCCTTCTGACCCATGCTGCCCTGTGAGTACTACAGTCCTCCCATCTCACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp GGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGAGAAGGGCGGAATGCCTGGGAGCTaGGAGCTTGTGCACCTGGAG +
Preference number: 5 (lower is better)
Translates to: GALLVRTVRLHPGAGEKGGMPGS*ELVHLE
Trigger: CTCCAGGTGCACAAGCTCCAAGCTCCCAGGCATTCC...GCCCTTCTCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp CCTCAGGTAGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACGGAATGCCTGGGAGCTaGGAGCTTGTGCACCTGGAG +
Preference number: 5 (lower is better)
Translates to: PQVDGKGRGQSKGEVSCHGMPGS*ELVHLE
Trigger: CTCCAGGTGCACAAGCTCCAAGCTCCCAGGCATTCC...GTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCTACCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp CAAGGCTGGCCTCCTGGGGAATGCCTGGGAGCTTGGAGCTTGTGCACCTGGAGGCCTTTCCTGGGCTTCTaGGACATGTGTCTGGAGCCC +
Preference number: 5 (lower is better)
Translates to: QGWPPGECLGAWSLCTWRPFLGF*DMCLEP
Trigger: GGGCTCCAGACACATGTCCAAGAAGCCCAGGAAAGG...CCTCCAGGTGCACAAGCTCCAAGCTCCCAGGCATTCCCCAGGAGGCCAGCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp GGGAGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCCAGAACAAAGTGCATaGGGCCCACTCCCACCCTCT +
Preference number: 5 (lower is better)
Translates to: GSPASGKNLACVGWDHKGPEQSA*GPLPPS
Trigger: AGAGGGTGGGAGTGGGCCCAATGCACTTTGTTCTGG...ACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp AGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTCGCTCCCCCTTAGCTTaGGCCCACCCTGCTTTGTGG +
Preference number: 5 (lower is better)
Translates to: SPASGKNLACVGWDHKGLRSPLA*AHPALW
Trigger: CCACAAAGCAGGGTGGGCCAAAGCTAAGGGGGAGCG...AAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR CAA 90 bp TGTCTAAGGTGCTCTGCTGGTAAGGACTGTGAGGCTGCATCCAGGGGCTGGAGACAACCCCGTGCCAGATaGTCCCGGCCACACCACCCA +
Preference number: 5 (lower is better)
Translates to: CLRCSAGKDCEAASRGWRQPRAR*SRPHHP
Trigger: TGGGTGGTGTGGCCGGGACAATCTGGCACGGGGTTG...TCTCCAGCCCCTGGATGCAGCCTCACAGTCCTTACCAGCAGAGCACCTTAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS GCA 90 bp TGCTGCTTCCTCTCTCCATCGCTCCCCCTTAGCTTTGGCCCACCCTaGTTTGTGGGAAGGTGGTTTAGGGCCGGCAGGTCTGGGTTGAGT +
Preference number: 5 (lower is better)
Translates to: CCFLSPSLPLSFGPP*FVGRWFRAGRSGLS
Trigger: ACTCAACCCAGACCTGCCGGCCCTAAACCACCTTCCCACAAAGCAGGGTGGGCCAAAGCTAAGGGGGAGCGATGGAGAGAGGAAGCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR CAA 90 bp CAAGGCTGGCCTCCTGGGGAATGCCTGGGAGCTTGGAGCTTGTGCACCTGGAGGTTGCTGCACGTGATGTaGCATTTCGTCACACCGTGG +
Preference number: 5 (lower is better)
Translates to: QGWPPGECLGAWSLCTWRLLHVM*HFVTPW
Trigger: CCACGGTGTGACGAAATGCAACATCACGTGCAGCAA...CCTCCAGGTGCACAAGCTCCAAGCTCCCAGGCATTCCCCAGGAGGCCAGCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp CAAGGCTGGCCTCCTGGGGAATGCCTGGGAGCTTGGAGCTTGTGCACCTGGAGGAAGATGATTGCGCGTTaGCCGCATGATGCCTGGTTC +
Preference number: 5 (lower is better)
Translates to: QGWPPGECLGAWSLCTWRKMIAR*PHDAWF
Trigger: GAACCAGGCATCATGCGGCAAACGCGCAATCATCTT...CCTCCAGGTGCACAAGCTCCAAGCTCCCAGGCATTCCCCAGGAGGCCAGCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp AGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTCTGGGAGCTTGGAGCTaGTGCACCTGGAGGATCCCA +
Preference number: 5 (lower is better)
Translates to: SPASGKNLACVGWDHKGLLGAWS*CTWRIP
Trigger: TGGGATCCTCCAGGTGCACAAGCTCCAAGCTCCCAG...AAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp CCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGGGGCAGCACAGCGTCTaGCTCTCTATGGACCAGAGC +
Preference number: 5 (lower is better)
Translates to: PASGKNLACVGWDHKGLVGQHSV*LSMDQS
Trigger: GCTCTGGTCCATAGAGAGCAAGACGCTGTGCTGCCC...CACAAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp GTGGGGGTGGGTATGAGGATGAGGGATCCCAGGCAGCTGTCTGAATCAAACAACACCGGGCCTGTGGCCTaGCCTATCCCCTCACCTCTG +
Preference number: 5 (lower is better)
Translates to: VGVGMRMRDPRQLSESNNTGPVA*PIPSPL
Trigger: CAGAGGTGAGGGGATAGGCAAGGCCACAGGCCCGGT...GTTGTTTGATTCAGACAGCTGCCTGGGATCCCTCATCCTCATACCCACCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS CCA 90 bp CATTTCGTCACACCGTGGTGCTGTCCAGCCAGCAGGACAGTCAGATaGCAGAAGGTGGCCAAGCGGAGCAGCCACGACAGAGATATCGGA +
Preference number: 5 (lower is better)
Translates to: HFVTPWCCPASRTVR*QKVAKRSSHDRDIG
Trigger: TCCGATATCTCTGTCGTGGCTGCTCCGCTTGGCCACCTTCTGCCATCTGACTGTCCTGCTGGCTGGACAGCACCACGGTGTGACGAAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000006053.7
CDS CCA 90 bp CCATCGCTCCCCCTTAGCTTTGGCCCACCCTGCTTTGTGGGAAGGTaGTTTAGGGCCGGCAGGTCTGGGTTGAGTCATCAAGGAGAAGCA +
Preference number: 5 (lower is better)
Translates to: PSLPLSFGPPCFVGR*FRAGRSGLSHQGEA
Trigger: TGCTTCTCCTTGATGACTCAACCCAGACCTGCCGGCCCTAAACCACCTTCCCACAAAGCAGGGTGGGCCAAAGCTAAGGGGGAGCGATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS CCA 90 bp TGCTGTCCTGAGTTCAAAGAGGTTCCTGGTCAGCAGGGATGTCTGTaGGCATCTGGCTTCCCAACCCCGTGCCAGATTGTCCCGGCCACA +
Preference number: 5 (lower is better)
Translates to: CCPEFKEVPGQQGCL*ASGFPTPCQIVPAT
Trigger: TGTGGCCGGGACAATCTGGCACGGGGTTGGGAAGCCAGATGCCCACAGACATCCCTGCTGACCAGGAACCTCTTTGAACTCAGGACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR CAA 90 bp CAGGCCCTGAGCTTCCTGAATATGCTGCGCCACACCCAGCAGGGGAGTGCAGAGTTGCTGCACGTGATGTaGCATTTCGTCACACCGTGG +
Preference number: 5 (lower is better)
Translates to: QALSFLNMLRHTQQGSAELLHVM*HFVTPW
Trigger: CCACGGTGTGACGAAATGCAACATCACGTGCAGCAA...CTCTGCACTCCCCTGCTGGGTGTGGCGCAGCATATTCAGGAAGCTCAGGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp GTGGGGGTGGGTATGAGGATGAGGGATCCCAGGCAGCTGTCTGAATCAAACAACCGCGTCCTTGACCCATaGCTCCTTCGGGTCGGCACA +
Preference number: 5 (lower is better)
Translates to: VGVGMRMRDPRQLSESNNRVLDP*LLRVGT
Trigger: TGTGCCGACCCGAAGGAGCAATGGGTCAAGGACGCG...GTTGTTTGATTCAGACAGCTGCCTGGGATCCCTCATCCTCATACCCACCCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp CAGGCCCTGAGCTTCCTGAATATGCTGCGCCACACCCAGCAGGGGAGTGCAGAGAGACCCCAGAGGGTTTaGCAAACATCTGGAGACCAG +
Preference number: 5 (lower is better)
Translates to: QALSFLNMLRHTQQGSAERPQRV*QTSGDQ
Trigger: CTGGTCTCCAGATGTTTGCAAAACCCTCTGGGGTCT...CTCTGCACTCCCCTGCTGGGTGTGGCGCAGCATATTCAGGAAGCTCAGGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS TCA 90 bp CAACTAGACACAGGCCAGAGGAGTTCACACGGGCACCAGGACATATaGATTACTACCACAGCTCCGGGGGATGTAGCGAAGGCCCTCCGC +
Preference number: 5 (lower is better)
Translates to: QLDTGQRSSHGHQDI*ITTTAPGDVAKALR
Trigger: GCGGAGGGCCTTCGCTACATCCCCCGGAGCTGTGGTAGTAATTCATATGTCCTGGTGCCCGTGTGAACTCCTCTGGCCTGTGTCTAGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS GCA 90 bp GGCACATGCACGCTTGCACACACAGAGAGACTTTGTAGAGTCTGCTaGTTCCTCTCTCCATCGCTCCCCCTTAGCTTTGGCCCACCCTGC +
Preference number: 5 (lower is better)
Translates to: GTCTLAHTERLCRVC*FLSPSLPLSFGPPC
Trigger: GCAGGGTGGGCCAAAGCTAAGGGGGAGCGATGGAGAGAGGAAGCAGCAGACTCTACAAAGTCTCTCTGTGTGTGCAAGCGTGCATGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS CCA 90 bp GTCATCCTGTCTCCAAAGTCCCCACCCTCTGCCACGGTCCCTGAATaGTCCTGGCCCGGCTCAGTTCTTGGTTCTGCCAGGAAGATTGTT +
Preference number: 5 (lower is better)
Translates to: VILSPKSPPSATVPE*SWPGSVLGSARKIV
Trigger: AACAATCTTCCTGGCAGAACCAAGAACTGAGCCGGGCCAGGACCATTCAGGGACCGTGGCAGAGGGTGGGGACTTTGGAGACAGGATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR CAA 90 bp CAGATACCCTTATCTCCCCTTCCCACAATGCCTAACCAAGGGCAGAGCCTCACTCGCGTCCTTGACCCATaGCTCCTTCGGGTCGGCACA +
Preference number: 5 (lower is better)
Translates to: QIPLSPLPTMPNQGQSLTRVLDP*LLRVGT
Trigger: TGTGCCGACCCGAAGGAGCAATGGGTCAAGGACGCG...AGTGAGGCTCTGCCCTTGGTTAGGCATTGTGGGAAGGGGAGATAAGGGTATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp GGAAGCAGTGCCAGGAAACACCACACTAGCCTCATGCAAGAAAAGACATGTCACGCTCAGGCCAGGCCCTaGGGTGGGGGTGGGTATGAG +
Preference number: 5 (lower is better)
Translates to: GSSARKHHTSLMQEKTCHAQARP*GGGGYE
Trigger: CTCATACCCACCCCCACCCAAGGGCCTGGCCTGAGC...GTGACATGTCTTTTCTTGCATGAGGCTAGTGTGGTGTTTCCTGGCACTGCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp TGTGTGAGATGGGAGGACTGTAGTACTCACAGGGCAGCATGGGTCAGAAGGGGCCCTTTCCTGGGCTTCTaGGACATGTGTCTGGAGCCC +
Preference number: 5 (lower is better)
Translates to: CVRWEDCSTHRAAWVRRGPFLGF*DMCLEP
Trigger: GGGCTCCAGACACATGTCCAAGAAGCCCAGGAAAGG...GCCCCTTCTGACCCATGCTGCCCTGTGAGTACTACAGTCCTCCCATCTCACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp TGGAAAACATCATGGAAATCCCTGGTCCTGTCTGCGGTGGGGACAAAGGTGAAGGGGACCACAAGGGTCTaGTGGCCTGGCTGCCTGCAG +
Preference number: 5 (lower is better)
Translates to: WKTSWKSLVLSAVGTKVKGTTRV*WPGCLQ
Trigger: CTGCAGGCAGCCAGGCCACAAGACCCTTGTGGTCCC...CTTCACCTTTGTCCCCACCGCAGACAGGACCAGGGATTTCCATGATGTTTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp CAGGCCCTGAGCTTCCTGAATATGCTGCGCCACACCCAGCAGGGGAGTGCAGAGCTTCCTAGATCATCCTaGTCCATGTCCTGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: QALSFLNMLRHTQQGSAELPRSS*SMSCLE
Trigger: CTCCAAGCAGGACATGGACAAGGATGATCTAGGAAG...CTCTGCACTCCCCTGCTGGGTGTGGCGCAGCATATTCAGGAAGCTCAGGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS TCA 90 bp TTGGGTGGGGGTGGGTATGAGGATGAGGGATCCCAGGCAGCTGTCTaGATCAAACAACTAGACACAGGCCAGAGGAGTTCACACGGGCAC +
Preference number: 5 (lower is better)
Translates to: LGGGGYEDEGSQAAV*IKQLDTGQRSSHGH
Trigger: GTGCCCGTGTGAACTCCTCTGGCCTGTGTCTAGTTGTTTGATTCAGACAGCTGCCTGGGATCCCTCATCCTCATACCCACCCCCACCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp AGACGGCAAGGGTCGGGGACAATCCAAGGGAGAGGTGAGCTGCCACCAGGGACCAAAATGGCACAGACGTaGGTGATGAGGGTTGGAAAA +
Preference number: 5 (lower is better)
Translates to: RRQGSGTIQGRGELPPGTKMAQT*VMRVGK
Trigger: TTTTCCAACCCTCATCACCAACGTCTGTGCCATTTT...GGTCCCTGGTGGCAGCTCACCTCTCCCTTGGATTGTCCCCGACCCTTGCCGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp AGGGAGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGGGAGGGAAGAGGCATTaGAAATTCCTGGAGCAAGAA +
Preference number: 5 (lower is better)
Translates to: REPSLRKESGVCGVGPQGGGKRH*KFLEQE
Trigger: TTCTTGCTCCAGGAATTTCAAATGCCTCTTCCCTCC...CCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS CCA 90 bp CCCCTGAGTGACCAGAGACAGGAGGAGGCAAGGGAGGCTGCCCAATaGATAGGAAAGAAGGTCCATTCTGTGCTCCCCAAATCCAAGATG +
Preference number: 5 (lower is better)
Translates to: PLSDQRQEEAREAAQ*IGKKVHSVLPKSKM
Trigger: CATCTTGGATTTGGGGAGCACAGAATGGACCTTCTTTCCTATCCATTGGGCAGCCTCCCTTGCCTCCTCCTGTCTCTGGTCACTCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR CAA 90 bp GGGAGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTAAGCTACAGGTATCTTaGATGTCATCTTGCTGCACG +
Preference number: 5 (lower is better)
Translates to: GSPASGKNLACVGWDHKGKLQVS*MSSCCT
Trigger: CGTGCAGCAAGATGACATCAAAGATACCTGTAGCTT...ACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp CCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTCTTGTGCTTCCTAGATCATCCTaGTCCATGTCCTGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: PASGKNLACVGWDHKGLVLPRSS*SMSCLE
Trigger: CTCCAAGCAGGACATGGACAAGGATGATCTAGGAAG...CACAAGACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp CAGGCCCTGAGCTTCCTGAATATGCTGCGCCACACCCAGCAGGGGAGTGCAGAGAAAATGGCACAGACGTaGGTGATGAGGGTTGGAAAA +
Preference number: 5 (lower is better)
Translates to: QALSFLNMLRHTQQGSAEKMAQT*VMRVGK
Trigger: TTTTCCAACCCTCATCACCAACGTCTGTGCCATTTT...CTCTGCACTCCCCTGCTGGGTGTGGCGCAGCATATTCAGGAAGCTCAGGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp GGGAGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTAAAATGGCACAGACGTaGGTGATGAGGGTTGGAAAA +
Preference number: 5 (lower is better)
Translates to: GSPASGKNLACVGWDHKGKMAQT*VMRVGK
Trigger: TTTTCCAACCCTCATCACCAACGTCTGTGCCATTTT...ACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp GTGTTGTCAGGGGGACAGGTATTCCTTACCTCCCTCTTTCCTTTCACAGATGGGTGGCCTTCAAGGCCTTaGACTCAGCCTCCCTCCCCT +
Preference number: 5 (lower is better)
Translates to: VLSGGQVFLTSLFPFTDGWPSRP*TQPPSP
Trigger: AGGGGAGGGAGGCTGAGTCAAAGGCCTTGAAGGCCA...CCCATCTGTGAAAGGAAAGAGGGAGGTAAGGAATACCTGTCCCCCTGACAACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS TCA 90 bp GGGTTTTGCAAACATCTGGAGACCAGGGCAGTCAAGAGAGCAAGCTaGTCTTATCTAGCCCTTCAGAGCCTGGGAAACCCCCAGGGCATC +
Preference number: 5 (lower is better)
Translates to: GFCKHLETRAVKRAS*SYLALQSLGNPQGI
Trigger: GATGCCCTGGGGGTTTCCCAGGCTCTGAAGGGCTAGATAAGATCAGCTTGCTCTCTTGACTGCCCTGGTCTCCAGATGTTTGCAAAACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS TCA 90 bp CTTGCTGCACGTGATGTTGCATTTCGTCACACCGTGGTGCTGTCCTaGGTTCAAAGAGGTTCCTGGTCAGCAGGGATGTCTGTGGGCATC +
Preference number: 5 (lower is better)
Translates to: LAARDVAFRHTVVLS*VQRGSWSAGMSVGI
Trigger: GATGCCCACAGACATCCCTGCTGACCAGGAACCTCTTTGAACTCAGGACAGCACCACGGTGTGACGAAATGCAACATCACGTGCAGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR CAA 90 bp GGGAGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGTATCTTTGATGTCATCTaGCTGCACGTGATGTTGCAT +
Preference number: 5 (lower is better)
Translates to: GSPASGKNLACVGWDHKGIFDVI*LHVMLH
Trigger: ATGCAACATCACGTGCAGCAAGATGACATCAAAGAT...ACCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp GTGGGGGTGGGTATGAGGATGAGGGATCCCAGGCAGCTGTCTGAATCAAACAACAAGATGATTGCGCGTTaGCCGCATGATGCCTGGTTC +
Preference number: 5 (lower is better)
Translates to: VGVGMRMRDPRQLSESNNKMIAR*PHDAWF
Trigger: GAACCAGGCATCATGCGGCAAACGCGCAATCATCTT...GTTGTTTGATTCAGACAGCTGCCTGGGATCCCTCATCCTCATACCCACCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp GGAAGCAGTGCCAGGAAACACCACACTAGCCTCATGCAAGAAAAGACATGTCACTGCTGCATCGCGTCCTaGACCCATTGCTCCTTCGGG +
Preference number: 5 (lower is better)
Translates to: GSSARKHHTSLMQEKTCHCCIAS*THCSFG
Trigger: CCCGAAGGAGCAATGGGTCAAGGACGCGATGCAGCA...GTGACATGTCTTTTCTTGCATGAGGCTAGTGTGGTGTTTCCTGGCACTGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp AGGGAGCCCAGCCTCAGGAAAGAATCTGGCGTGTGTGGGGTGGGACCACAAGGGATAAATAATTGTTCATaGGGGCTGGGATGGCGTCAA +
Preference number: 5 (lower is better)
Translates to: REPSLRKESGVCGVGPQGINNCS*GLGWRQ
Trigger: TTGACGCCATCCCAGCCCCAATGAACAATTATTTAT...CCCTTGTGGTCCCACCCCACACACGCCAGATTCTTTCCTGAGGCTGGGCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp CAGGCCCTGAGCTTCCTGAATATGCTGCGCCACACCCAGCAGGGGAGTGCAGAGATAAATAATTGTTCATaGGGGCTGGGATGGCGTCAA +
Preference number: 5 (lower is better)
Translates to: QALSFLNMLRHTQQGSAEINNCS*GLGWRQ
Trigger: TTGACGCCATCCCAGCCCCAATGAACAATTATTTAT...CTCTGCACTCCCCTGCTGGGTGTGGCGCAGCATATTCAGGAAGCTCAGGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp TGGAAAACATCATGGAAATCCCTGGTCCTGTCTGCGGTGGGGACAAAGGTGAAGCCAGAACAAAGTGCATaGGGCCCACTCCCACCCTCT +
Preference number: 5 (lower is better)
Translates to: WKTSWKSLVLSAVGTKVKPEQSA*GPLPPS
Trigger: AGAGGGTGGGAGTGGGCCCAATGCACTTTGTTCTGG...CTTCACCTTTGTCCCCACCGCAGACAGGACCAGGGATTTCCATGATGTTTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp TGTGTGAGATGGGAGGACTGTAGTACTCACAGGGCAGCATGGGTCAGAAGGGGCCTTCCTAGATCATCCTaGTCCATGTCCTGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: CVRWEDCSTHRAAWVRRGLPRSS*SMSCLE
Trigger: CTCCAAGCAGGACATGGACAAGGATGATCTAGGAAG...GCCCCTTCTGACCCATGCTGCCCTGTGAGTACTACAGTCCTCCCATCTCACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS TCA 90 bp CTTGCTGCACGTGATGTTGCATTTCGTCACACCGTGGTGCTGTCCTaGGTTCAAAGAGGTTCCAGCCAGCAGGACAGTCAGATGGCAGAA +
Preference number: 5 (lower is better)
Translates to: LAARDVAFRHTVVLS*VQRGSSQQDSQMAE
Trigger: TTCTGCCATCTGACTGTCCTGCTGGCTGGAACCTCTTTGAACTCAGGACAGCACCACGGTGTGACGAAATGCAACATCACGTGCAGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563383.1
CDS GCA 90 bp GATGTCATCTTGCTGCACGTGATGTTGCATTTCGTCACACCGTGGTaGTGTCCTGAGTTCAAAGAGGTTCCTGGTCAGCAGGGATGTCTG +
Preference number: 5 (lower is better)
Translates to: DVILLHVMLHFVTPW*CPEFKEVPGQQGCL
Trigger: CAGACATCCCTGCTGACCAGGAACCTCTTTGAACTCAGGACAGCACCACGGTGTGACGAAATGCAACATCACGTGCAGCAAGATGACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR CAA 90 bp TGTGTGAGATGGGAGGACTGTAGTACTCACAGGGCAGCATGGGTCAGAAGGGGCAAGCTACAGGTATCTTaGATGTCATCTTGCTGCACG +
Preference number: 5 (lower is better)
Translates to: CVRWEDCSTHRAAWVRRGKLQVS*MSSCCT
Trigger: CGTGCAGCAAGATGACATCAAAGATACCTGTAGCTT...GCCCCTTCTGACCCATGCTGCCCTGTGAGTACTACAGTCCTCCCATCTCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp GTCCCTTTCAGAAACAAACAGGGGACTCATGGAAAACATCATGGAAATCCCTGGCTGGGAGCTTGGAGCTaGTGCACCTGGAGGATCCCA +
Preference number: 5 (lower is better)
Translates to: VPFRNKQGTHGKHHGNPWLGAWS*CTWRIP
Trigger: TGGGATCCTCCAGGTGCACAAGCTCCAAGCTCCCAG...CCAGGGATTTCCATGATGTTTTCCATGAGTCCCCTGTTTGTTTCTGAAAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp TGGAAAACATCATGGAAATCCCTGGTCCTGTCTGCGGTGGGGACAAAGGTGAAGAGATGGGAAAAGCCATaGCCCACCTCCAGGGCTTTA +
Preference number: 5 (lower is better)
Translates to: WKTSWKSLVLSAVGTKVKRWEKP*PTSRAL
Trigger: TAAAGCCCTGGAGGTGGGCAATGGCTTTTCCCATCT...CTTCACCTTTGTCCCCACCGCAGACAGGACCAGGGATTTCCATGATGTTTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS CCA 90 bp GGCTGTCCTTTCTCTCTGAGTAACCAGGATATAAAAGTCACTGTGTaGGCTGGCCACCCTCCTTCTGCAATGGAACCTCAGACTGACTCA +
Preference number: 5 (lower is better)
Translates to: GCPFSLSNQDIKVTV*AGHPPSAMEPQTDS
Trigger: TGAGTCAGTCTGAGGTTCCATTGCAGAAGGAGGGTGGCCAGCCCACACAGTGACTTTTATATCCTGGTTACTCAGAGAGAAAGGACAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR CAA 90 bp GTGGGGGTGGGTATGAGGATGAGGGATCCCAGGCAGCTGTCTGAATCAAACAACAAGCTACAGGTATCTTaGATGTCATCTTGCTGCACG +
Preference number: 5 (lower is better)
Translates to: VGVGMRMRDPRQLSESNNKLQVS*MSSCCT
Trigger: CGTGCAGCAAGATGACATCAAAGATACCTGTAGCTT...GTTGTTTGATTCAGACAGCTGCCTGGGATCCCTCATCCTCATACCCACCCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp TATGTTGGTGGCTTGATGGTGGAACTAGGATCAGAACCCAGCCTTCAGACTCAGAAGATGATTGCGCGTTaGCCGCATGATGCCTGGTTC +
Preference number: 5 (lower is better)
Translates to: YVGGLMVELGSEPSLQTQKMIAR*PHDAWF
Trigger: GAACCAGGCATCATGCGGCAAACGCGCAATCATCTT...CTGAGTCTGAAGGCTGGGTTCTGATCCTAGTTCCACCATCAAGCCACCAACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp TGTGTGAGATGGGAGGACTGTAGTACTCACAGGGCAGCATGGGTCAGAAGGGGCATAAATAATTGTTCATaGGGGCTGGGATGGCGTCAA +
Preference number: 5 (lower is better)
Translates to: CVRWEDCSTHRAAWVRRGINNCS*GLGWRQ
Trigger: TTGACGCCATCCCAGCCCCAATGAACAATTATTTAT...GCCCCTTCTGACCCATGCTGCCCTGTGAGTACTACAGTCCTCCCATCTCACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp GTCCCTTTCAGAAACAAACAGGGGACTCATGGAAAACATCATGGAAATCCCTGGGCCGGCAGGTCTGGGTaGAGTCATCAAGGAGAAGCA +
Preference number: 5 (lower is better)
Translates to: VPFRNKQGTHGKHHGNPWAGRSG*SHQGEA
Trigger: TGCTTCTCCTTGATGACTCAACCCAGACCTGCCGGC...CCAGGGATTTCCATGATGTTTTCCATGAGTCCCCTGTTTGTTTCTGAAAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS CCA 90 bp ATCTTATCTAGCCCTTCAGAGCCTGGGAAACCCCCAGGGCATCCCTaGGCTCCACCAGAACACGAACTGCTCATGCATAAATATTTACAT +
Preference number: 5 (lower is better)
Translates to: ILSSPSEPGKPPGHP*APPEHELLMHKYLH
Trigger: ATGTAAATATTTATGCATGAGCAGTTCGTGTTCTGGTGGAGCCCAGGGATGCCCTGGGGGTTTCCCAGGCTCTGAAGGGCTAGATAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS CCA 90 bp TTTGATGTCATCTTGCTGCACGTGATGTTGCATTTCGTCACACCGTaGTGCTGTCCTGAGTTCAAAGAGGTTCCTGGTCAGCAGGGATGT +
Preference number: 5 (lower is better)
Translates to: FDVILLHVMLHFVTP*CCPEFKEVPGQQGC
Trigger: ACATCCCTGCTGACCAGGAACCTCTTTGAACTCAGGACAGCACCACGGTGTGACGAAATGCAACATCACGTGCAGCAAGATGACATCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS GCA 90 bp CTGGGAAACCCCCAGGGCATCCCTGGGCTCCACCAGAACACGAACTaGTCATGCATAAATATTTACATATATGTGGCCATGCAAACATAC +
Preference number: 5 (lower is better)
Translates to: LGNPQGIPGLHQNTN*SCINIYIYVAMQTY
Trigger: GTATGTTTGCATGGCCACATATATGTAAATATTTATGCATGAGCAGTTCGTGTTCTGGTGGAGCCCAGGGATGCCCTGGGGGTTTCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS-3UTR CAA 90 bp CAGATACCCTTATCTCCCCTTCCCACAATGCCTAACCAAGGGCAGAGCCTCACTATCTTTGATGTCATCTaGCTGCACGTGATGTTGCAT +
Preference number: 5 (lower is better)
Translates to: QIPLSPLPTMPNQGQSLTIFDVI*LHVMLH
Trigger: ATGCAACATCACGTGCAGCAAGATGACATCAAAGAT...AGTGAGGCTCTGCCCTTGGTTAGGCATTGTGGGAAGGGGAGATAAGGGTATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS-3UTR CAA 90 bp GGAAGCAGTGCCAGGAAACACCACACTAGCCTCATGCAAGAAAAGACATGTCACTTTCTTCTGCTTAGCTaGAGCTCAAGGAGGATGAGT +
Preference number: 5 (lower is better)
Translates to: GSSARKHHTSLMQEKTCHFLLLS*SSRRMS
Trigger: ACTCATCCTCCTTGAGCTCAAGCTAAGCAGAAGAAA...GTGACATGTCTTTTCTTGCATGAGGCTAGTGTGGTGTTTCCTGGCACTGCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS TCA 90 bp GAACCAGAGAGAAACCCCGGGACAGGACAAATAAACCCAACTATTTaGTATAAACATTTGAAGTTGTTTACATTGAATTTCCACCTTTTC +
Preference number: 5 (lower is better)
Translates to: EPERNPGTGQINPTI*YKHLKLFTLNFHLF
Trigger: GAAAAGGTGGAAATTCAATGTAAACAACTTCAAATGTTTATATCAAATAGTTGGGTTTATTTGTCCTGTCCCGGGGTTTCTCTCTGGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS GCA 72 bp AAGAGGAGGCCAAGGAAGGCCAGCAGCCCCACCGCCTaGCTCCGGGTGGCAGCCTGGGCGTCAGGGACAGGA +
Preference number: 6 (lower is better)
Translates to: KRRPRKASSPTA*LRVAAWASGTG
Trigger: TCCTGTCCCTGACGCCCAGGCTGCCACCCGGAGGCAGGCGGTGGGGCTGCTGGCCTTCCTTGGCCTCCTCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS TCA 72 bp GCGGAGCAGCCACGACAGAGATATCGGAGCCATGGCTaGGGGTGGGCAAGAGTCCCGGCGGGGGCCAGGCAG +
Preference number: 6 (lower is better)
Translates to: AEQPRQRYRSHG*GWARVPAGARQ
Trigger: CTGCCTGGCCCCCGCCGGGACTCTTGCCCACCCTCAGCCATGGCTCCGATATCTCTGTCGTGGCTGCTCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000564948.1
CDS CCA 72 bp CCAAGCGGAGCAGCCACGACAGAGATATCGGAGCCATaGCTGAGGGTGGGCAAGAGTCCCGGCGGGGGCCAG +
Preference number: 6 (lower is better)
Translates to: PSGAATTEISEP*LRVGKSPGGGQ
Trigger: CTGGCCCCCGCCGGGACTCTTGCCCACCCTCAGCCATGGCTCCGATATCTCTGTCGTGGCTGCTCCGCTTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000564948.1
CDS CCA 72 bp GCCAGGCCCCCAGTCCTGGAAGGCATCCGTGTGCGCTaGCACGGGACCCATCTCCTCCCGCTCCAGAGAGTT +
Preference number: 6 (lower is better)
Translates to: ARPPVLEGIRVR*HGTHLLPLQRV
Trigger: AACTCTCTGGAGCGGGAGGAGATGGGTCCCGTGCCAGCGCACACGGATGCCTTCCAGGACTGGGGGCCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS CCA 72 bp ACAGAGACGTGGGCCATGCTGCCAGGCCCCCAGTCCTaGAAGGCATCCGTGTGCGCTGGCACGGGACCCATC +
Preference number: 6 (lower is better)
Translates to: TETWAMLPGPQS*KASVCAGTGPI
Trigger: GATGGGTCCCGTGCCAGCGCACACGGATGCCTTCCAGGACTGGGGGCCTGGCAGCATGGCCCACGTCTCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS CCA 72 bp GGGGTCCCTTCTGAGGAGACAGGGACCACAGAGACGTaGGCCATGCTGCCAGGCCCCCAGTCCTGGAAGGCA +
Preference number: 6 (lower is better)
Translates to: GVPSEETGTTET*AMLPGPQSWKA
Trigger: TGCCTTCCAGGACTGGGGGCCTGGCAGCATGGCCCACGTCTCTGTGGTCCCTGTCTCCTCAGAAGGGACCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS GCA 72 bp CCGGGGGATGTAGCGAAGGCCCTCCGCCATCTCTCCTaGCATCTTTCGAGGGCAGCCCTGGAGGCTCTGGTA +
Preference number: 6 (lower is better)
Translates to: PGDVAKALRHLS*HLSRAALEALV
Trigger: TACCAGAGCCTCCAGGGCTGCCCTCGAAAGATGGCAGGAGAGATGGCGGAGGGCCTTCGCTACATCCCCCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS GCA 72 bp GCGGCAGGGGTGGTCCTGGGCTTCACCTCGCCGATCTaGTTCTCGAAGGTGCCGCCATTTCGAGTTAGGGCA +
Preference number: 6 (lower is better)
Translates to: AAGVVLGFTSPI*FSKVPPFRVRA
Trigger: TGCCCTAACTCGAAATGGCGGCACCTTCGAGAAGCAGATCGGCGAGGTGAAGCCCAGGACCACCCCTGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000564948.1
ENST00000565912.1
CDS GCA 72 bp CTTCTGAGGAGACAGGGACCACAGAGACGTGGGCCATaGTGCCAGGCCCCCAGTCCTGGAAGGCATCCGTGT +
Preference number: 6 (lower is better)
Translates to: LLRRQGPQRRGP*CQAPSPGRHPC
Trigger: ACACGGATGCCTTCCAGGACTGGGGGCCTGGCAGCATGGCCCACGTCTCTGTGGTCCCTGTCTCCTCAGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS GCA 72 bp TCCTGGGCTTCACCTCGCCGATCTGCTTCTCGAAGGTaGCGCCATTTCGAGTTAGGGCAGCAGCCTGGCGGT +
Preference number: 6 (lower is better)
Translates to: SWASPRRSASRR*RHFELGQQPGG
Trigger: ACCGCCAGGCTGCTGCCCTAACTCGAAATGGCGGCACCTTCGAGAAGCAGATCGGCGAGGTGAAGCCCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000564948.1
ENST00000565912.1
CDS CCA 72 bp ACACCGTGGTGCTGTCCAGCCAGCAGGACAGTCAGATaGCAGAAGGTGGCCAAGCGGAGCAGCCACGACAGA +
Preference number: 6 (lower is better)
Translates to: TPWCCPASRTVR*QKVAKRSSHDR
Trigger: TCTGTCGTGGCTGCTCCGCTTGGCCACCTTCTGCCATCTGACTGTCCTGCTGGCTGGACAGCACCACGGTGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000006053.7
CDS CCA 72 bp TCTCCAAAGTCCCCACCCTCTGCCACGGTCCCTGAATaGTCCTGGCCCGGCTCAGTTCTTGGTTCTGCCAGG +
Preference number: 6 (lower is better)
Translates to: SPKSPPSATVPE*SWPGSVLGSAR
Trigger: CCTGGCAGAACCAAGAACTGAGCCGGGCCAGGACCATTCAGGGACCGTGGCAGAGGGTGGGGACTTTGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS CCA 72 bp AGAGGTTCCTGGTCAGCAGGGATGTCTGTGGGCATCTaGCTTCCCAACCCCGTGCCAGATTGTCCCGGCCAC +
Preference number: 6 (lower is better)
Translates to: RGSWSAGMSVGI*LPNPVPDCPGH
Trigger: GTGGCCGGGACAATCTGGCACGGGGTTGGGAAGCCAGATGCCCACAGACATCCCTGCTGACCAGGAACCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS GCA 72 bp CCATTTCGAGTTAGGGCAGCAGCCTGGCGGTCCAGATaGTGCATCGCGTCCTTGACCCATTGCTCCTTCGGG +
Preference number: 6 (lower is better)
Translates to: PFRVRAAAWRSR*CIASLTHCSFG
Trigger: CCCGAAGGAGCAATGGGTCAAGGACGCGATGCAGCATCTGGACCGCCAGGCTGCTGCCCTAACTCGAAATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000564948.1
ENST00000565912.1
CDS CCA 72 bp TCGAAGGTGCCGCCATTTCGAGTTAGGGCAGCAGCCTaGCGGTCCAGATGCTGCATCGCGTCCTTGACCCAT +
Preference number: 6 (lower is better)
Translates to: SKVPPFRVRAAA*RSRCCIASLTH
Trigger: ATGGGTCAAGGACGCGATGCAGCATCTGGACCGCCAGGCTGCTGCCCTAACTCGAAATGGCGGCACCTTCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000564948.1
ENST00000565912.1
CDS CCA 72 bp CTGTCTCGTCTCCAAGCAGCCAGCAGGACAGTCAGATaGCAGAAGGTGGCCAAGCGGAGCAGCCACGACAGA +
Preference number: 6 (lower is better)
Translates to: LSRLQAASRTVR*QKVAKRSSHDR
Trigger: TCTGTCGTGGCTGCTCCGCTTGGCCACCTTCTGCCATCTGACTGTCCTGCTGGCTGCTTGGAGACGAGACAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564948.1
CDS GCA 72 bp ACCCATTGCTCCTTCGGGTCGGCACAGAACAGCCTGTaGTGTCTCGTCTCCAAGCAGCCAGCAGGACAGTCA +
Preference number: 6 (lower is better)
Translates to: THCSFGSAQNSL*CLVSKQPAGQS
Trigger: TGACTGTCCTGCTGGCTGCTTGGAGACGAGACAGCACAGGCTGTTCTGTGCCGACCCGAAGGAGCAATGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564948.1
CDS CCA 72 bp AAGTCACTGTGTGGGCTGGCCACCCTCCTTCTGCAATaGAACCTCAGACTGACTCACCTGCAGCCTCCCCAG +
Preference number: 6 (lower is better)
Translates to: KSLCGLATLLLQ*NLRLTHLQPPQ
Trigger: CTGGGGAGGCTGCAGGTGAGTCAGTCTGAGGTTCCATTGCAGAAGGAGGGTGGCCAGCCCACACAGTGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS CAA 90 bp CCACCCTGCTTTGTGGGAAGGTGGTTTAGGGCCGGCAGGTCTGGGTaGAGTCATCAAGGAGAAGCACTAGTAGCTTCAGGGGGTTGGGGG +
Preference number: 6 (lower is better)
Translates to: PPCFVGRWFRAGRSG*SHQGEALVASGGWG
Trigger: CCCCCAACCCCCTGAAGCTACTAGTGCTTCTCCTTGATGACTCAACCCAGACCTGCCGGCCCTAAACCACCTTCCCACAAAGCAGGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS CAA 90 bp GATGGAGCAGGTTCTCCTGCTCTAGTCCCCACCGGGCCTGTGGCCTaGCCTATCCCCTCACCTCTGCCTTATTTCTTCCCGCTGCCATTT +
Preference number: 6 (lower is better)
Translates to: DGAGSPALVPTGPVA*PIPSPLPYFFPLPF
Trigger: AAATGGCAGCGGGAAGAAATAAGGCAGAGGTGAGGGGATAGGCAAGGCCACAGGCCCGGTGGGGACTAGAGCAGGAGAACCTGCTCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS GCA 72 bp ACCCATTGCTCCTTCGGGTCGGCACAGAACAGCCTGTaGTGTCTCGTCTCCAAGATGATTGCGCGTTTGCCG +
Preference number: 6 (lower is better)
Translates to: THCSFGSAQNSL*CLVSKMIARLP
Trigger: CGGCAAACGCGCAATCATCTTGGAGACGAGACAGCACAGGCTGTTCTGTGCCGACCCGAAGGAGCAATGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS CCA 72 bp GAGTTCAAAGAGGTTCCAGCCAGCAGGACAGTCAGATaGCAGAAGGTGGCCAAGCGGAGCAGCCACGACAGA +
Preference number: 6 (lower is better)
Translates to: EFKEVPASRTVR*QKVAKRSSHDR
Trigger: TCTGTCGTGGCTGCTCCGCTTGGCCACCTTCTGCCATCTGACTGTCCTGCTGGCTGGAACCTCTTTGAACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563383.1
CDS CAA 72 bp TCTGCTGCTTCCTCTCTCCATCGCTCCCCCTTAGCTTaGGCCCACCCTGCTTTGTGGGAAGGTGGTTTAGGG +
Preference number: 6 (lower is better)
Translates to: SAASSLHRSPLA*AHPALWEGGLG
Trigger: CCCTAAACCACCTTCCCACAAAGCAGGGTGGGCCAAAGCTAAGGGGGAGCGATGGAGAGAGGAAGCAGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS CCA 72 bp GAGTTCAAAGAGGTTCCTGGTCAGCAGGGATGTCTGTaGGCATCTGGCTTCCCAACCCCGTGCCAGATTGTC +
Preference number: 6 (lower is better)
Translates to: EFKEVPGQQGCL*ASGFPTPCQIV
Trigger: GACAATCTGGCACGGGGTTGGGAAGCCAGATGCCCACAGACATCCCTGCTGACCAGGAACCTCTTTGAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS TCA 72 bp ACAGGCCAGAGGAGTTCACACGGGCACCAGGACATATaGATTACTACCACAGCTCCGGGGGATGTAGCGAAG +
Preference number: 6 (lower is better)
Translates to: TGQRSSHGHQDI*ITTTAPGDVAK
Trigger: CTTCGCTACATCCCCCGGAGCTGTGGTAGTAATTCATATGTCCTGGTGCCCGTGTGAACTCCTCTGGCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS TCA 72 bp CGTGATGTTGCATTTCGTCACACCGTGGTGCTGTCCTaGGTTCAAAGAGGTTCCAGCCAGCAGGACAGTCAG +
Preference number: 6 (lower is better)
Translates to: RDVAFRHTVVLS*VQRGSSQQDSQ
Trigger: CTGACTGTCCTGCTGGCTGGAACCTCTTTGAACTCAGGACAGCACCACGGTGTGACGAAATGCAACATCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563383.1
CDS GCA 72 bp TTGCTGCACGTGATGTTGCATTTCGTCACACCGTGGTaGTGTCCTGAGTTCAAAGAGGTTCCAGCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: LLHVMLHFVTPW*CPEFKEVPASR
Trigger: CCTGCTGGCTGGAACCTCTTTGAACTCAGGACAGCACCACGGTGTGACGAAATGCAACATCACGTGCAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563383.1
CDS GCA 72 bp ACGCTTGCACACACAGAGAGACTTTGTAGAGTCTGCTaGTTCCTCTCTCCATCGCTCCCCCTTAGCTTTGGC +
Preference number: 6 (lower is better)
Translates to: TLAHTERLCRVC*FLSPSLPLSFG
Trigger: GCCAAAGCTAAGGGGGAGCGATGGAGAGAGGAAGCAGCAGACTCTACAAAGTCTCTCTGTGTGTGCAAGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS TCA 72 bp GGTGGGTATGAGGATGAGGGATCCCAGGCAGCTGTCTaGATCAAACAACTAGACACAGGCCAGAGGAGTTCA +
Preference number: 6 (lower is better)
Translates to: GGYEDEGSQAAV*IKQLDTGQRSS
Trigger: TGAACTCCTCTGGCCTGTGTCTAGTTGTTTGATTCAGACAGCTGCCTGGGATCCCTCATCCTCATACCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS TCA 72 bp AAACATCTGGAGACCAGGGCAGTCAAGAGAGCAAGCTaGTCTTATCTAGCCCTTCAGAGCCTGGGAAACCCC +
Preference number: 6 (lower is better)
Translates to: KHLETRAVKRAS*SYLALQSLGNP
Trigger: GGGGTTTCCCAGGCTCTGAAGGGCTAGATAAGATCAGCTTGCTCTCTTGACTGCCCTGGTCTCCAGATGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS TCA 72 bp GCCAGAATGAGCCCGAGAGCAGTTGCTGAAAGGTACTaGGTCATCCTGCCTAGGAGGGAAGAGGCATTTGAA +
Preference number: 6 (lower is better)
Translates to: ARMSPRAVAERY*VILPRREEAFE
Trigger: TTCAAATGCCTCTTCCCTCCTAGGCAGGATGACTCAGTACCTTTCAGCAACTGCTCTCGGGCTCATTCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS TCA 72 bp CGTGATGTTGCATTTCGTCACACCGTGGTGCTGTCCTaGGTTCAAAGAGGTTCCTGGTCAGCAGGGATGTCT +
Preference number: 6 (lower is better)
Translates to: RDVAFRHTVVLS*VQRGSWSAGMS
Trigger: AGACATCCCTGCTGACCAGGAACCTCTTTGAACTCAGGACAGCACCACGGTGTGACGAAATGCAACATCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS GCA 72 bp TGCACGCTTGCACACACAGAGAGACTTTGTAGAGTCTaGTGCTTCCTCTCTCCATCGCTCCCCCTTAGCTTT +
Preference number: 6 (lower is better)
Translates to: CTLAHTERLCRV*CFLSPSLPLSF
Trigger: AAAGCTAAGGGGGAGCGATGGAGAGAGGAAGCAGCAGACTCTACAAAGTCTCTCTGTGTGTGCAAGCGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS GCA 72 bp GCCCGAGAGCAGTTGCTGAAAGGTACTGAGTCATCCTaGCTAGGAGGGAAGAGGCATTTGAAATTCCTGGAG +
Preference number: 6 (lower is better)
Translates to: AREQLLKGTESS*LGGKRHLKFLE
Trigger: CTCCAGGAATTTCAAATGCCTCTTCCCTCCTAGGCAGGATGACTCAGTACCTTTCAGCAACTGCTCTCGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS GCA 72 bp TTGCTGCACGTGATGTTGCATTTCGTCACACCGTGGTaGTGTCCTGAGTTCAAAGAGGTTCCTGGTCAGCAG +
Preference number: 6 (lower is better)
Translates to: LLHVMLHFVTPW*CPEFKEVPGQQ
Trigger: CTGCTGACCAGGAACCTCTTTGAACTCAGGACAGCACCACGGTGTGACGAAATGCAACATCACGTGCAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS CCA 72 bp ATCTTGCTGCACGTGATGTTGCATTTCGTCACACCGTaGTGCTGTCCTGAGTTCAAAGAGGTTCCAGCCAGC +
Preference number: 6 (lower is better)
Translates to: ILLHVMLHFVTP*CCPEFKEVPAS
Trigger: GCTGGCTGGAACCTCTTTGAACTCAGGACAGCACCACGGTGTGACGAAATGCAACATCACGTGCAGCAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563383.1
CDS CAA 90 bp AGCAAAGCTACAGGTATCTTTGATGTCATCTTGCTGCACGTGATGTaGCATTTCGTCACACCGTGGTGCTGTCCAGCCAGCAGGACAGTC +
Preference number: 6 (lower is better)
Translates to: SKATGIFDVILLHVM*HFVTPWCCPASRTV
Trigger: GACTGTCCTGCTGGCTGGACAGCACCACGGTGTGACGAAATGCAACATCACGTGCAGCAAGATGACATCAAAGATACCTGTAGCTTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000006053.7
CDS CAA 90 bp AGAAGGTCCATTCTGTGCTCCCCAAATCCAAGATGGGAAAAGCCATaGCCCACCTCCAGGGCTTTAAAGAGCCACAGAGTCATCCTGTCT +
Preference number: 6 (lower is better)
Translates to: RRSILCSPNPRWEKP*PTSRALKSHRVILS
Trigger: AGACAGGATGACTCTGTGGCTCTTTAAAGCCCTGGAGGTGGGCAATGGCTTTTCCCATCTTGGATTTGGGGAGCACAGAATGGACCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS TCA 72 bp CTGTCTCGTCTCCAAGATGATTGCGCGTTTGCCGCATaGTGCCTGGTTCTGTTGATAGTGGATGAGCAAAGC +
Preference number: 6 (lower is better)
Translates to: LSRLQDDCAFAA*CLVLLIVDEQS
Trigger: GCTTTGCTCATCCACTATCAACAGAACCAGGCATCATGCGGCAAACGCGCAATCATCTTGGAGACGAGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS CCA 72 bp ATCTTGCTGCACGTGATGTTGCATTTCGTCACACCGTaGTGCTGTCCTGAGTTCAAAGAGGTTCCTGGTCAG +
Preference number: 6 (lower is better)
Translates to: ILLHVMLHFVTP*CCPEFKEVPGQ
Trigger: CTGACCAGGAACCTCTTTGAACTCAGGACAGCACCACGGTGTGACGAAATGCAACATCACGTGCAGCAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS CAA 72 bp ACAGGTATCTTTGATGTCATCTTGCTGCACGTGATGTaGCATTTCGTCACACCGTGGTGCTGTCCAGCCAGC +
Preference number: 6 (lower is better)
Translates to: TGIFDVILLHVM*HFVTPWCCPAS
Trigger: GCTGGCTGGACAGCACCACGGTGTGACGAAATGCAACATCACGTGCAGCAAGATGACATCAAAGATACCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000006053.7
CDS CAA 72 bp ATTCTGTGCTCCCCAAATCCAAGATGGGAAAAGCCATaGCCCACCTCCAGGGCTTTAAAGAGCCACAGAGTC +
Preference number: 6 (lower is better)
Translates to: ILCSPNPRWEKP*PTSRALKSHRV
Trigger: GACTCTGTGGCTCTTTAAAGCCCTGGAGGTGGGCAATGGCTTTTCCCATCTTGGATTTGGGGAGCACAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS GCA 72 bp CCCCAGGGCATCCCTGGGCTCCACCAGAACACGAACTaGTCATGCATAAATATTTACATATATGTGGCCATG +
Preference number: 6 (lower is better)
Translates to: PQGIPGLHQNTN*SCINIYIYVAM
Trigger: CATGGCCACATATATGTAAATATTTATGCATGAGCAGTTCGTGTTCTGGTGGAGCCCAGGGATGCCCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS CCA 72 bp TTCTCTCTGAGTAACCAGGATATAAAAGTCACTGTGTaGGCTGGCCACCCTCCTTCTGCAATGGAACCTCAG +
Preference number: 6 (lower is better)
Translates to: FSLSNQDIKVTV*AGHPPSAMEPQ
Trigger: CTGAGGTTCCATTGCAGAAGGAGGGTGGCCAGCCCACACAGTGACTTTTATATCCTGGTTACTCAGAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS CAA 72 bp AGGTTATATGCAGCAAAAGCAAGACCCCAGAGGGTTTaGCAAACATCTGGAGACCAGGGCAGTCAAGAGAGC +
Preference number: 6 (lower is better)
Translates to: RLYAAKARPQRV*QTSGDQGSQES
Trigger: GCTCTCTTGACTGCCCTGGTCTCCAGATGTTTGCAAAACCCTCTGGGGTCTTGCTTTTGCTGCATATAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS CAA 90 bp CCATGCAAACATACACCACTTTCCCAAATACAGGCACATGCACGCTaGCACACACAGAGAGACTTTGTAGAGTCTGCTGCTTCCTCTCTC +
Preference number: 6 (lower is better)
Translates to: PCKHTPLSQIQAHAR*HTQRDFVESAASSL
Trigger: GAGAGAGGAAGCAGCAGACTCTACAAAGTCTCTCTGTGTGTGCAAGCGTGCATGTGCCTGTATTTGGGAAAGTGGTGTATGTTTGCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS CAA 90 bp TCTGAGTCAAGGTTATATGCAGCAAAAGCAAGACCCCAGAGGGTTTaGCAAACATCTGGAGACCAGGGCAGTCAAGAGAGCAAGCTGATC +
Preference number: 6 (lower is better)
Translates to: SESRLYAAKARPQRV*QTSGDQGSQESKLI
Trigger: GATCAGCTTGCTCTCTTGACTGCCCTGGTCTCCAGATGTTTGCAAAACCCTCTGGGGTCTTGCTTTTGCTGCATATAACCTTGACTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565912.1
CDS TCA 72 bp AAGCTACAGGTATCTTTGATGTCATCTTGCTGCACGTaGTGTTGCATTTCGTCACACCGTGGTGCTGTCCAG +
Preference number: 6 (lower is better)
Translates to: KLQVSLMSSCCT*CCISSHRGAVQ
Trigger: CTGGACAGCACCACGGTGTGACGAAATGCAACATCACGTGCAGCAAGATGACATCAAAGATACCTGTAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000006053.7
CDS TCA 72 bp AAGCTACAGGTATCTTTGATGTCATCTTGCTGCACGTaGTGTTGCATTTCGTCACACCGTGGTGCTGTCCTG +
Preference number: 6 (lower is better)
Translates to: KLQVSLMSSCCT*CCISSHRGAVL
Trigger: CAGGACAGCACCACGGTGTGACGAAATGCAACATCACGTGCAGCAAGATGACATCAAAGATACCTGTAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563383.1
ENST00000565912.1
CDS CAA 72 bp ACAGGTATCTTTGATGTCATCTTGCTGCACGTGATGTaGCATTTCGTCACACCGTGGTGCTGTCCTGAGTTC +
Preference number: 6 (lower is better)
Translates to: TGIFDVILLHVM*HFVTPWCCPEF
Trigger: GAACTCAGGACAGCACCACGGTGTGACGAAATGCAACATCACGTGCAGCAAGATGACATCAAAGATACCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563383.1
ENST00000565912.1
CDS CAA 90 bp AGCAAAGCTACAGGTATCTTTGATGTCATCTTGCTGCACGTGATGTaGCATTTCGTCACACCGTGGTGCTGTCCTGAGTTCAAAGAGGTT +
Preference number: 6 (lower is better)
Translates to: SKATGIFDVILLHVM*HFVTPWCCPEFKEV
Trigger: AACCTCTTTGAACTCAGGACAGCACCACGGTGTGACGAAATGCAACATCACGTGCAGCAAGATGACATCAAAGATACCTGTAGCTTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563383.1
ENST00000565912.1
CDS CAA 72 bp TGGATGAGCAAAGCTACAGGTATCTTTGATGTCATCTaGCTGCACGTGATGTTGCATTTCGTCACACCGTGG +
Preference number: 6 (lower is better)
Translates to: WMSKATGIFDVI*LHVMLHFVTPW
Trigger: CCACGGTGTGACGAAATGCAACATCACGTGCAGCAAGATGACATCAAAGATACCTGTAGCTTTGCTCATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1
CDS TCA 72 bp GTTTGCCGCATGATGCCTGGTTCTGTTGATAGTGGATaGGCAAAGCTACAGGTATCTTTGATGTCATCTTGC +
Preference number: 6 (lower is better)
Translates to: VCRMMPGSVDSG*AKLQVSLMSSC
Trigger: GCAAGATGACATCAAAGATACCTGTAGCTTTGCTCATCCACTATCAACAGAACCAGGCATCATGCGGCAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000006053.7
ENST00000563383.1
ENST00000565912.1