RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CWF19L1 (Homo sapiens)

Ensembl gene IDs: ENSG00000095485

Ensembl transcript IDs: ENST00000354105.10, ENST00000466955.5, ENST00000468709.5, ENST00000473842.1, ENST00000478047.1, ENST00000482452.5, ENST00000496796.5

Found 259 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTCCGGAAGCGGCGAGCCAGGGTCTCCTCGTCTTCCTTGCTGATCTaGCACTGCCTCCAGTCAGACTTATCAGGAACATTAAGGATGGCT +
Preference number: 1 (lower is better)
Translates to: FRKRRARVSSSSLLI*HCLQSDLSGTLRMA
Trigger: AGCCATCCTTAATGTTCCTGATAAGTCTGACTGGAGGCAGTGTCAGATCAGCAAGGAAGACGAGGAGACCCTGGCTCGCCGCTTCCGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
3UTR GCA 90 bp GAGGCTGAGGAGGTTTGCGAGGCTGCTTTGGATGAGGAGAAGATTTaGTATCTCTACCTGTGGATGAACGCTTCCTTCCCTGCTTTTCAT +
Preference number: 1 (lower is better)
Translates to: EAEEVCEAALDEEKI*YLYLWMNASFPAFH
Trigger: ATGAAAAGCAGGGAAGGAAGCGTTCATCCACAGGTAGAGATAGCAAATCTTCTCCTCATCCAAAGCAGCCTCGCAAACCTCCTCAGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468709.5
3UTR GCA 90 bp TCCTGGAGGGAGGTTTGCGAGGCTGCTTTGGATGAGGAGAAGATTTaGTATCTCTACCTGTGGATGAACGCTTCCTTCCCTGCTTTTCAT +
Preference number: 1 (lower is better)
Translates to: SWREVCEAALDEEKI*YLYLWMNASFPAFH
Trigger: ATGAAAAGCAGGGAAGGAAGCGTTCATCCACAGGTAGAGATAGCAAATCTTCTCCTCATCCAAAGCAGCCTCGCAAACCTCCCTCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482452.5
3UTR CCA 90 bp GAGTGCTCTGGGATTTCCAACAGCTCTATCTGCTGCTCCTGTGCCTaGGTAATGAAGGCATCTTTAATGTCATCAGTAGTAGAGCAGCTG +
Preference number: 1 (lower is better)
Translates to: ECSGISNSSICCSCA*VMKASLMSSVVEQL
Trigger: CAGCTGCTCTACTACTGATGACATTAAAGATGCCTTCATTACCCAGGCACAGGAGCAGCAGATAGAGCTGTTGGAAATCCCAGAGCACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
3UTR GCA 90 bp GTCAGAGTGCTCTGGGATTTCCAACAGCTCTATCTGCTGCTCCTGTaGCTGGGTAATGAAGGCATCTTTAATGTCATCAGTAGTAGAGCA +
Preference number: 1 (lower is better)
Translates to: VRVLWDFQQLYLLLL*LGNEGIFNVISSRA
Trigger: TGCTCTACTACTGATGACATTAAAGATGCCTTCATTACCCAGGCACAGGAGCAGCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
3UTR GCA 90 bp TGCTTGATGTCAGAGTGCTCTGGGATTTCCAACAGCTCTATCTGCTaGTCCTGTGCCTGGGTAATGAAGGCATCTTTAATGTCATCAGTA +
Preference number: 1 (lower is better)
Translates to: CLMSECSGISNSSIC*SCAWVMKASLMSSV
Trigger: TACTGATGACATTAAAGATGCCTTCATTACCCAGGCACAGGAGCAGCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGACATCAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
3UTR GCA 90 bp ATCTGCTTGATGTCAGAGTGCTCTGGGATTTCCAACAGCTCTATCTaGTGCTCCTGTGCCTGGGTAATGAAGGCATCTTTAATGTCATCA +
Preference number: 1 (lower is better)
Translates to: ICLMSECSGISNSSI*CSCAWVMKASLMSS
Trigger: TGATGACATTAAAGATGCCTTCATTACCCAGGCACAGGAGCAGCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGACATCAAGCAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
3UTR CCA 90 bp AAGCCTCTCATAATAGGTCTTTTCCAAAGCAGCAAAATGGTATCTTaGTTTCAAGCCCGTGGCAAGACTGGAAACCAAAGCAGAACCACA +
Preference number: 1 (lower is better)
Translates to: KPLIIGLFQSSKMVS*FQARGKTGNQSRTT
Trigger: TGTGGTTCTGCTTTGGTTTCCAGTCTTGCCACGGGCTTGAAACCAAGATACCATTTTGCTGCTTTGGAAAAGACCTATTATGAGAGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468709.5
3UTR CCA 90 bp TGCGAGGCTGCTTTGGATGAGGAGAAGATTTGCTATCTCTACCTGTaGATGAACGCTTCCTTCCCTGCTTTTCATTTAAATCAAAGAAAA +
Preference number: 1 (lower is better)
Translates to: CEAALDEEKICYLYL*MNASFPAFHLNQRK
Trigger: TTTTCTTTGATTTAAATGAAAAGCAGGGAAGGAAGCGTTCATCCACAGGTAGAGATAGCAAATCTTCTCCTCATCCAAAGCAGCCTCGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
3UTR-3UTR CCA 90 bp TGGAGTGCAATGGAGCGATCTTGGCTCATGCAATCCTGCTTGGGTGACAGAGCGAAACCAGCAGGGTCCTaGAGGGAGGTTTGCGAGGCT +
Preference number: 2 (lower is better)
Translates to: WSAMERSWLMQSCLGDRAKPAGS*REVCEA
Trigger: AGCCTCGCAAACCTCCCTCCAGGACCCTGCTGGTTT...CGCTCTGTCACCCAAGCAGGATTGCATGAGCCAAGATCGCTCCATTGCACTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482452.5
3UTR-3UTR TCA 90 bp CCATTTCCCTCGACTCTTAAAGAACCGTCTCAGAGTGGCCTTATACTTCTCCACCAGGGTCCTGGAGGCTaGGGAGGTTTGCGAGGCTGC +
Preference number: 2 (lower is better)
Translates to: PFPSTLKEPSQSGLILLHQGPGG*GGLRGC
Trigger: GCAGCCTCGCAAACCTCCTCAGCCTCCAGGACCCTG...GTGGAGAAGTATAAGGCCACTCTGAGACGGTTCTTTAAGAGTCGAGGGAAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468709.5
3UTR-3UTR GCA 90 bp GTCATAGGGCTCAAAGTCTTTCCGGAAGCGGCGAGCCAGGGTCTCCTCGTCTTCTGCTTGATGTCAGAGTaGTCTGGGATTTCCAACAGC +
Preference number: 2 (lower is better)
Translates to: VIGLKVFPEAASQGLLVFCLMSE*SGISNS
Trigger: GCTGTTGGAAATCCCAGAGCACTCTGACATCAAGCA...GAAGACGAGGAGACCCTGGCTCGCCGCTTCCGGAAAGACTTTGAGCCCTATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
3UTR-3UTR GCA 90 bp CCTCCAGTCAGACTTATCAGGAACATTAAGGATGGCTTCACTGGCCAGGACCTCTCACCCAGGCTGGAGTaGAATGGAGCGATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: PPVRLIRNIKDGFTGQDLSPRLE*NGAILA
Trigger: AGCCAAGATCGCTCCATTGCACTCCAGCCTGGGTGA...GAGGTCCTGGCCAGTGAAGCCATCCTTAATGTTCCTGATAAGTCTGACTGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
3UTR-3UTR GCA 90 bp CCTCCAGTCAGACTTATCAGGAACATTAAGGATGGCTTCACTGGCCAGGACCTCGAGGCTGAGGAGGTTTaGGAGGCTGCTTTGGATGAG +
Preference number: 2 (lower is better)
Translates to: PPVRLIRNIKDGFTGQDLEAEEV*EAALDE
Trigger: CTCATCCAAAGCAGCCTCGCAAACCTCCTCAGCCTC...GAGGTCCTGGCCAGTGAAGCCATCCTTAATGTTCCTGATAAGTCTGACTGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468709.5
3UTR-3UTR TCA 90 bp ATGTCAGAGTGCTCTGGGATTTCCAACAGCTCTATCTGCTGCTCCTGTGCCTGGGAAAAACTGACAGGCTaGTTCTTCCACAGGGGCAAG +
Preference number: 2 (lower is better)
Translates to: MSECSGISNSSICCSCAWEKLTG*FFHRGK
Trigger: CTTGCCCCTGTGGAAGAATCAGCCTGTCAGTTTTTC...CCAGGCACAGGAGCAGCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
3UTR-3UTR GCA 90 bp TCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCCATGGGAGATTGTAGTCCACAGTTATGCCACTaGAATCCTGCTTGGGTGACA +
Preference number: 2 (lower is better)
Translates to: SMGLHKRGRETVPMGDCSPQLCH*NPAWVT
Trigger: TGTCACCCAAGCAGGATTGCAGTGGCATAACTGTGG...ACTACAATCTCCCATGGGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
3UTR-3UTR CCA 90 bp TCAGAGTGCTCTGGGATTTCCAACAGCTCTATCTGCTGCTCCTGTGCCTGGGTATGTAGGCAAGTTCCATaGGACTGCACAAAAGAGGCA +
Preference number: 2 (lower is better)
Translates to: SECSGISNSSICCSCAWVCRQVP*DCTKEA
Trigger: TGCCTCTTTTGTGCAGTCCCATGGAACTTGCCTACA...TACCCAGGCACAGGAGCAGCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468709.5
3UTR-3UTR CCA 90 bp TCAGAGTGCTCTGGGATTTCCAACAGCTCTATCTGCTGCTCCTGTGCCTGGGTATGCTATCTCTACCTGTaGATGAACGCTTCCTTCCCT +
Preference number: 2 (lower is better)
Translates to: SECSGISNSSICCSCAWVCYLYL*MNASFP
Trigger: AGGGAAGGAAGCGTTCATCCACAGGTAGAGATAGCA...TACCCAGGCACAGGAGCAGCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
3UTR-3UTR TCA 90 bp TGTCAGAGTGCTCTGGGATTTCCAACAGCTCTATCTGCTGCTCCTGTGCCTGGGAATGTGTGCCGATGTTaGCCACCAAATGTTTTTCCA +
Preference number: 2 (lower is better)
Translates to: CQSALGFPTALSAAPVPGNVCRC*PPNVFP
Trigger: TGGAAAAACATTTGGTGGTCAACATCGGCACACATT...CCCAGGCACAGGAGCAGCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
3UTR-3UTR CCA 90 bp TGTCAGAGTGCTCTGGGATTTCCAACAGCTCTATCTGCTGCTCCTGTGCCTGGGGGGAAACAGTCCCCATaGGAGATTGTAGTTTCTTTA +
Preference number: 2 (lower is better)
Translates to: CQSALGFPTALSAAPVPGGKQSP*EIVVSL
Trigger: TAAAGAAACTACAATCTCCCATGGGGACTGTTTCCC...CCCAGGCACAGGAGCAGCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGACA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000468709.5
3UTR-3UTR CCA 90 bp CCATTTCCCTCGACTCTTAAAGAACCGTCTCAGAGTGGCCTTATACTTCTCCACAGCCCGTGGCAAGACTaGAAACCAAAGCAGAACCAC +
Preference number: 2 (lower is better)
Translates to: PFPSTLKEPSQSGLILLHSPWQD*KPKQNH
Trigger: GTGGTTCTGCTTTGGTTTCCAGTCTTGCCACGGGCT...GTGGAGAAGTATAAGGCCACTCTGAGACGGTTCTTTAAGAGTCGAGGGAAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468709.5
3UTR-3UTR CCA 90 bp CACTGCCTCCAGTCAGACTTATCAGGAACATTAAGGATGGCTTCACTGGCCAGGTTGGTTTCAAGCCCGTaGCAAGACTGGAAACCAAAG +
Preference number: 2 (lower is better)
Translates to: HCLQSDLSGTLRMASLARLVSSP*QDWKPK
Trigger: CTTTGGTTTCCAGTCTTGCCACGGGCTTGAAACCAA...CCTGGCCAGTGAAGCCATCCTTAATGTTCCTGATAAGTCTGACTGGAGGCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468709.5
3UTR-3UTR CCA 90 bp CTGCTTGATGTCAGAGTGCTCTGGGATTTCCAACAGCTCTATCTGCTGCTCCTGAGAACCGTCTCAGAGTaGCCTTATACTTCTCCACCT +
Preference number: 2 (lower is better)
Translates to: LLDVRVLWDFQQLYLLLLRTVSE*PYTSPP
Trigger: AGGTGGAGAAGTATAAGGCCACTCTGAGACGGTTCT...CAGGAGCAGCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGACATCAAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
3UTR-3UTR TCA 90 bp CCATTTCCCTCGACTCTTAAAGAACCGTCTCAGAGTGGCCTTATACTTCTCCACGAAAAACTGACAGGCTaGTTCTTCCACAGGGGCAAG +
Preference number: 2 (lower is better)
Translates to: PFPSTLKEPSQSGLILLHEKLTG*FFHRGK
Trigger: CTTGCCCCTGTGGAAGAATCAGCCTGTCAGTTTTTC...GTGGAGAAGTATAAGGCCACTCTGAGACGGTTCTTTAAGAGTCGAGGGAAATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
3UTR-3UTR GCA 90 bp TCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCCATGGGAGATTGTAGTATAAACCGGGTGGCATaGTGTGCATTTTCCTGTAGA +
Preference number: 2 (lower is better)
Translates to: SMGLHKRGRETVPMGDCSINRVA*CAFSCR
Trigger: TCTACAGGAAAATGCACAGCATGCCACCCGGTTTAT...ACTACAATCTCCCATGGGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000468709.5
3UTR-3UTR GCA 90 bp GAAGGCATCTTTAATGTCATCAGTAGTAGAGCAGCTGATTGGGACAGGAATGACTCCTGGAGGGAGGTTTaGGAGGCTGCTTTGGATGAG +
Preference number: 2 (lower is better)
Translates to: EGIFNVISSRAADWDRNDSWREV*EAALDE
Trigger: CTCATCCAAAGCAGCCTCGCAAACCTCCCTCCAGGA...GTCATTCCTGTCCCAATCAGCTGCTCTACTACTGATGACATTAAAGATGCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482452.5
3UTR-3UTR CCA 90 bp TGGGATTTCCAACAGCTCTATCTGCTGCTCCTGTGCCTGGGTAATGAAGGCATCAGCAAAATGGTATCTTaGTTTCAAGCCCGTGGCAAG +
Preference number: 2 (lower is better)
Translates to: WDFQQLYLLLLCLGNEGISKMVS*FQARGK
Trigger: CTTGCCACGGGCTTGAAACCAAGATACCATTTTGCT...GATGCCTTCATTACCCAGGCACAGGAGCAGCAGATAGAGCTGTTGGAAATCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468709.5
3UTR-3UTR CCA 90 bp TGGAGTGCAATGGAGCGATCTTGGCTCATGCAATCCTGCTTGGGTGACAGAGCGTCCTGTAGAATGATATaGTTTCGATATGGAAGCCTC +
Preference number: 2 (lower is better)
Translates to: WSAMERSWLMQSCLGDRASCRMI*FRYGSL
Trigger: GAGGCTTCCATATCGAAACCATATCATTCTACAGGA...CGCTCTGTCACCCAAGCAGGATTGCATGAGCCAAGATCGCTCCATTGCACTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482452.5
3UTR-3UTR CCA 90 bp CACTGCCTCCAGTCAGACTTATCAGGAACATTAAGGATGGCTTCACTGGCCAGGTTTGCGAGGCTGCTTTaGATGAGGAGAAGATTTGCT +
Preference number: 2 (lower is better)
Translates to: HCLQSDLSGTLRMASLARFARLL*MRRRFA
Trigger: AGCAAATCTTCTCCTCATCCAAAGCAGCCTCGCAAA...CCTGGCCAGTGAAGCCATCCTTAATGTTCCTGATAAGTCTGACTGGAGGCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
3UTR-3UTR CCA 90 bp CCATTTCCCTCGACTCTTAAAGAACCGTCTCAGAGTGGCCTTATACTTCTCCACCAGATAAGCCTCCTTTaGCCAGGGCAAGGTAGCAAT +
Preference number: 2 (lower is better)
Translates to: PFPSTLKEPSQSGLILLHQISLL*PGQGSN
Trigger: ATTGCTACCTTGCCCTGGCCAAAGGAGGCTTATCTG...GTGGAGAAGTATAAGGCCACTCTGAGACGGTTCTTTAAGAGTCGAGGGAAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
3UTR-3UTR GCA 90 bp CTGCTTGATGTCAGAGTGCTCTGGGATTTCCAACAGCTCTATCTGCTGCTCCTGTGGATTTCCAACATTTaGCAGAGCTATAAACCGGGT +
Preference number: 2 (lower is better)
Translates to: LLDVRVLWDFQQLYLLLLWISNI*QSYKPG
Trigger: ACCCGGTTTATAGCTCTGGCAAATGTTGGAAATCCA...CAGGAGCAGCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGACATCAAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
3UTR-3UTR CCA 90 bp CACTGCCTCCAGTCAGACTTATCAGGAACATTAAGGATGGCTTCACTGGCCAGGTCCAAAGCAGCAAAATaGTATCTTGGTTTCAAGCCC +
Preference number: 2 (lower is better)
Translates to: HCLQSDLSGTLRMASLARSKAAK*YLGFKP
Trigger: GGGCTTGAAACCAAGATACCATTTTGCTGCTTTGGA...CCTGGCCAGTGAAGCCATCCTTAATGTTCCTGATAAGTCTGACTGGAGGCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468709.5
3UTR-3UTR TCA 90 bp TTTGAAAATGTTGATATACACAAGCTGTACTTGGAGCTGGATAACAGACATAGGACTCCTCACCTCAGGTaGTCCACCTGCCTCGGCTTC +
Preference number: 2 (lower is better)
Translates to: FENVDIHKLYLELDNRHRTPHLR*STCLGF
Trigger: GAAGCCGAGGCAGGTGGATCACCTGAGGTGAGGAGT...CCTATGTCTGTTATCCAGCTCCAAGTACAGCTTGTGTATATCAACATTTTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
3UTR CAA 90 bp GAAGCCTCTCATAATAGGTCTTTTCCAAAGCAGCAAAATGGTATCTaGGTTTCAAGCCCGTGGCAAGACTGGAAACCAAAGCAGAACCAC +
Preference number: 2 (lower is better)
Translates to: EASHNRSFPKQQNGI*VSSPWQDWKPKQNH
Trigger: GTGGTTCTGCTTTGGTTTCCAGTCTTGCCACGGGCTTGAAACCAAGATACCATTTTGCTGCTTTGGAAAAGACCTATTATGAGAGGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468709.5
3UTR-3UTR TCA 90 bp CCTCCAGTCAGACTTATCAGGAACATTAAGGATGGCTTCACTGGCCAGGACCTCTCATGGGAACAATACTaGACGCGTAAAGATACTTTT +
Preference number: 2 (lower is better)
Translates to: PPVRLIRNIKDGFTGQDLSWEQY*TRKDTF
Trigger: AAAAGTATCTTTACGCGTTCAGTATTGTTCCCATGA...GAGGTCCTGGCCAGTGAAGCCATCCTTAATGTTCCTGATAAGTCTGACTGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
3UTR-3UTR CCA 90 bp TGTGCAATCTGCTTGATGTCAGAGTGCTCTGGGATTTCCAACAGCTCTATCTGCGAATTTGCTTTCCTATaGATGCTTCCTGCCCAGATT +
Preference number: 2 (lower is better)
Translates to: CAICLMSECSGISNSSICEFAFL*MLPAQI
Trigger: AATCTGGGCAGGAAGCATCCATAGGAAAGCAAATTC...GCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGACATCAAGCAGATTGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
3UTR-3UTR CCA 90 bp TGTGCAATCTGCTTGATGTCAGAGTGCTCTGGGATTTCCAACAGCTCTATCTGCTCCTGTAGAATGATATaGTTTCGATATGGAAGCCTC +
Preference number: 2 (lower is better)
Translates to: CAICLMSECSGISNSSICSCRMI*FRYGSL
Trigger: GAGGCTTCCATATCGAAACCATATCATTCTACAGGA...GCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGACATCAAGCAGATTGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
3UTR-3UTR TCA 90 bp TTTGAAAATGTTGATATACACAAGCTGTACTTGGAGCTGGATAACAGACATAGGGCAATCCTGCTTGGGTaGCAGAGCGAGACTTTGTCT +
Preference number: 2 (lower is better)
Translates to: FENVDIHKLYLELDNRHRAILLG*QSETLS
Trigger: AGACAAAGTCTCGCTCTGTCACCCAAGCAGGATTGC...CCTATGTCTGTTATCCAGCTCCAAGTACAGCTTGTGTATATCAACATTTTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354105.10
ENST00000468709.5
ENST00000482452.5
3UTR-3UTR TCA 90 bp TCCTTCCCTGCTTTTCATTTAAATCAAAGAAAAACTGACAGGCTGATTCTTCCAGCAATCCTGCTTGGGTaGCAGAGCGAGACTTTGTCT +
Preference number: 2 (lower is better)
Translates to: SFPAFHLNQRKTDRLILPAILLG*QSETLS
Trigger: AGACAAAGTCTCGCTCTGTCACCCAAGCAGGATTGC...TGGAAGAATCAGCCTGTCAGTTTTTCTTTGATTTAAATGAAAAGCAGGGAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
3UTR-3UTR GCA 90 bp TTAAATCAAAGAAAAACTGACAGGCTGATTCTTCCACAGGGGCAAGAATTTGCTCCACAGTTATGCCACTaGAATCCTGCTTGGGTGACA +
Preference number: 2 (lower is better)
Translates to: LNQRKTDRLILPQGQEFAPQLCH*NPAWVT
Trigger: TGTCACCCAAGCAGGATTGCAGTGGCATAACTGTGG...AGCAAATTCTTGCCCCTGTGGAAGAATCAGCCTGTCAGTTTTTCTTTGATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468709.5
3UTR-3UTR CCA 90 bp GAAGGCATCTTTAATGTCATCAGTAGTAGAGCAGCTGATTGGGACAGGAATGACGATATGGTTTCGATATaGAAGCCTCTCATAATAGGT +
Preference number: 2 (lower is better)
Translates to: EGIFNVISSRAADWDRNDDMVSI*KPLIIG
Trigger: ACCTATTATGAGAGGCTTCCATATCGAAACCATATC...GTCATTCCTGTCCCAATCAGCTGCTCTACTACTGATGACATTAAAGATGCCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468709.5
3UTR-3UTR CCA 90 bp TTTGAAAATGTTGATATACACAAGCTGTACTTGGAGCTGGATAACAGACATAGGAGAACCGTCTCAGAGTaGCCTTATACTTCTCCACCT +
Preference number: 2 (lower is better)
Translates to: FENVDIHKLYLELDNRHRRTVSE*PYTSPP
Trigger: AGGTGGAGAAGTATAAGGCCACTCTGAGACGGTTCT...CCTATGTCTGTTATCCAGCTCCAAGTACAGCTTGTGTATATCAACATTTTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
3UTR-3UTR TCA 90 bp TTTGAAAATGTTGATATACACAAGCTGTACTTGGAGCTGGATAACAGACATAGGTGTAAGGGTTTTCAGTaGCATCCGGAGGCTGTTTTA +
Preference number: 2 (lower is better)
Translates to: FENVDIHKLYLELDNRHRCKGFQ*HPEAVL
Trigger: TAAAACAGCCTCCGGATGTCACTGAAAACCCTTACA...CCTATGTCTGTTATCCAGCTCCAAGTACAGCTTGTGTATATCAACATTTTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
3UTR-3UTR CCA 90 bp TTTGAAAATGTTGATATACACAAGCTGTACTTGGAGCTGGATAACAGACATAGGTTTGCGAGGCTGCTTTaGATGAGGAGAAGATTTGCT +
Preference number: 2 (lower is better)
Translates to: FENVDIHKLYLELDNRHRFARLL*MRRRFA
Trigger: AGCAAATCTTCTCCTCATCCAAAGCAGCCTCGCAAA...CCTATGTCTGTTATCCAGCTCCAAGTACAGCTTGTGTATATCAACATTTTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
3UTR-3UTR GCA 90 bp TTTGAAAATGTTGATATACACAAGCTGTACTTGGAGCTGGATAACAGACATAGGTTGCTTTCCTATGGATaGTTCCTGCCCAGATTTTCT +
Preference number: 2 (lower is better)
Translates to: FENVDIHKLYLELDNRHRLLSYG*FLPRFS
Trigger: AGAAAATCTGGGCAGGAAGCATCCATAGGAAAGCAA...CCTATGTCTGTTATCCAGCTCCAAGTACAGCTTGTGTATATCAACATTTTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
3UTR-3UTR TCA 90 bp TTTGAAAATGTTGATATACACAAGCTGTACTTGGAGCTGGATAACAGACATAGGTCATGGGAACAATACTaGACGCGTAAAGATACTTTT +
Preference number: 2 (lower is better)
Translates to: FENVDIHKLYLELDNRHRSWEQY*TRKDTF
Trigger: AAAAGTATCTTTACGCGTTCAGTATTGTTCCCATGA...CCTATGTCTGTTATCCAGCTCCAAGTACAGCTTGTGTATATCAACATTTTCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
3UTR TCA 72 bp GGAAGCGGCGAGCCAGGGTCTCCTCGTCTTCCTTGCTaGTCTGACACTGCCTCCAGTCAGACTTATCAGGAA +
Preference number: 3 (lower is better)
Translates to: GSGEPGSPRLPC*SDTASSQTYQE
Trigger: TTCCTGATAAGTCTGACTGGAGGCAGTGTCAGATCAGCAAGGAAGACGAGGAGACCCTGGCTCGCCGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
3UTR TCA 72 bp CGGCGAGCCAGGGTCTCCTCGTCTTCCTTGCTGATCTaGCACTGCCTCCAGTCAGACTTATCAGGAACATTA +
Preference number: 3 (lower is better)
Translates to: RRARVSSSSLLI*HCLQSDLSGTL
Trigger: TAATGTTCCTGATAAGTCTGACTGGAGGCAGTGTCAGATCAGCAAGGAAGACGAGGAGACCCTGGCTCGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
3UTR GCA 72 bp GCTGCTCCTGGCTGTGCAATCTGCTTGATGTCAGAGTaGTCTGGGATTTCCAACAGCTCTATCTGCTGCTCC +
Preference number: 3 (lower is better)
Translates to: AAPGCAICLMSE*SGISNSSICCS
Trigger: GGAGCAGCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGACATCAAGCAGATTGCACAGCCAGGAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
3UTR CCA 72 bp TCCTGGCTGTGCAATCTGCTTGATGTCAGAGTGCTCTaGGATTTCCAACAGCTCTATCTGCTGCTCCTGTGC +
Preference number: 3 (lower is better)
Translates to: SWLCNLLDVRVL*DFQQLYLLLLC
Trigger: GCACAGGAGCAGCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGACATCAAGCAGATTGCACAGCCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
3UTR-3UTR CAA 90 bp GTCATAGGGCTCAAAGTCTTTCCGGAAGCGGCGAGCCAGGGTCTCCTCGTCTTCATACACAAGCTGTACTaGGAGCTGGATAACAGACAT +
Preference number: 3 (lower is better)
Translates to: VIGLKVFPEAASQGLLVFIHKLY*ELDNRH
Trigger: ATGTCTGTTATCCAGCTCCAAGTACAGCTTGTGTAT...GAAGACGAGGAGACCCTGGCTCGCCGCTTCCGGAAAGACTTTGAGCCCTATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
3UTR-3UTR CAA 90 bp ATGTCAGAGTGCTCTGGGATTTCCAACAGCTCTATCTGCTGCTCCTGTGCCTGGGTTTGCGAGGCTGCTTaGGATGAGGAGAAGATTTGC +
Preference number: 3 (lower is better)
Translates to: MSECSGISNSSICCSCAWVCEAA*DEEKIC
Trigger: GCAAATCTTCTCCTCATCCAAAGCAGCCTCGCAAAC...CCAGGCACAGGAGCAGCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
3UTR-3UTR CAA 90 bp ATGTCAGAGTGCTCTGGGATTTCCAACAGCTCTATCTGCTGCTCCTGTGCCTGGGCAGAACCACATTTTTaGGTATCCACTTCTCCCCAG +
Preference number: 3 (lower is better)
Translates to: MSECSGISNSSICCSCAWAEPHF*VSTSPQ
Trigger: CTGGGGAGAAGTGGATACCAAAAAATGTGGTTCTGC...CCAGGCACAGGAGCAGCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468709.5
3UTR-3UTR CAA 90 bp ATGTCAGAGTGCTCTGGGATTTCCAACAGCTCTATCTGCTGCTCCTGTGCCTGGCAGCAAAATGGTATCTaGGTTTCAAGCCCGTGGCAA +
Preference number: 3 (lower is better)
Translates to: MSECSGISNSSICCSCAWQQNGI*VSSPWQ
Trigger: TTGCCACGGGCTTGAAACCAAGATACCATTTTGCTG...CCAGGCACAGGAGCAGCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468709.5
3UTR TCA 72 bp AGGGTCCTGGAGGGAGGTTTGCGAGGCTGCTTTGGATaGGGAGAAGATTTGCTATCTCTACCTGTGGATGAA +
Preference number: 3 (lower is better)
Translates to: RVLEGGLRGCFG*GEDLLSLPVDE
Trigger: TTCATCCACAGGTAGAGATAGCAAATCTTCTCCTCATCCAAAGCAGCCTCGCAAACCTCCCTCCAGGACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482452.5
3UTR-3UTR CAA 90 bp CACTGCCTCCAGTCAGACTTATCAGGAACATTAAGGATGGCTTCACTGGCCAGGCACAGGGGCAAGAATTaGCTTTCCTATGGATGCTTC +
Preference number: 3 (lower is better)
Translates to: HCLQSDLSGTLRMASLARHRGKN*LSYGCF
Trigger: GAAGCATCCATAGGAAAGCAAATTCTTGCCCCTGTG...CCTGGCCAGTGAAGCCATCCTTAATGTTCCTGATAAGTCTGACTGGAGGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
3UTR-3UTR CAA 90 bp ATGTCATCAGTAGTAGAGCAGCTGATTGGGACAGGAATGACCTGTAGCTGGAGGGTTTGCGAGGCTGCTTaGGATGAGGAGAAGATTTGC +
Preference number: 3 (lower is better)
Translates to: MSSVVEQLIGTGMTCSWRVCEAA*DEEKIC
Trigger: GCAAATCTTCTCCTCATCCAAAGCAGCCTCGCAAAC...CCTCCAGCTACAGGTCATTCCTGTCCCAATCAGCTGCTCTACTACTGATGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
3UTR-3UTR CAA 90 bp CTGCTTGATGTCAGAGTGCTCTGGGATTTCCAACAGCTCTATCTGCTGCTCCTGCAATGTGTGCCGATGTaGACCACCAAATGTTTTTCC +
Preference number: 3 (lower is better)
Translates to: LLDVRVLWDFQQLYLLLLQCVPM*TTKCFS
Trigger: GGAAAAACATTTGGTGGTCAACATCGGCACACATTG...CAGGAGCAGCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGACATCAAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
3UTR GCA 72 bp TCAGAGTGCTCTGGGATTTCCAACAGCTCTATCTGCTaGTCCTGTGCCTGGGTAATGAAGGCATCTTTAATG +
Preference number: 3 (lower is better)
Translates to: SECSGISNSSIC*SCAWVMKASLM
Trigger: CATTAAAGATGCCTTCATTACCCAGGCACAGGAGCAGCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
3UTR GCA 72 bp ATGTCAGAGTGCTCTGGGATTTCCAACAGCTCTATCTaGTGCTCCTGTGCCTGGGTAATGAAGGCATCTTTA +
Preference number: 3 (lower is better)
Translates to: MSECSGISNSSI*CSCAWVMKASL
Trigger: TAAAGATGCCTTCATTACCCAGGCACAGGAGCAGCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
3UTR GCA 72 bp CTCTGGGATTTCCAACAGCTCTATCTGCTGCTCCTGTaGCTGGGTAATGAAGGCATCTTTAATGTCATCAGT +
Preference number: 3 (lower is better)
Translates to: LWDFQQLYLLLL*LGNEGIFNVIS
Trigger: ACTGATGACATTAAAGATGCCTTCATTACCCAGGCACAGGAGCAGCAGATAGAGCTGTTGGAAATCCCAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
3UTR CCA 72 bp CCAAAGCAGCAAAATGGTATCTTGGTTTCAAGCCCGTaGCAAGACTGGAAACCAAAGCAGAACCACATTTTT +
Preference number: 3 (lower is better)
Translates to: PKQQNGILVSSP*QDWKPKQNHIF
Trigger: AAAAATGTGGTTCTGCTTTGGTTTCCAGTCTTGCCACGGGCTTGAAACCAAGATACCATTTTGCTGCTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468709.5
3UTR-3UTR CAA 90 bp TTTGAAAATGTTGATATACACAAGCTGTACTTGGAGCTGGATAACAGACATAGGAAGGCAGAGGATCCCTaGAGCCTAGGCATTACAGAC +
Preference number: 3 (lower is better)
Translates to: FENVDIHKLYLELDNRHRKAEDP*SLGITD
Trigger: GTCTGTAATGCCTAGGCTCAAGGGATCCTCTGCCTT...CCTATGTCTGTTATCCAGCTCCAAGTACAGCTTGTGTATATCAACATTTTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
3UTR GCA 72 bp TTTCCAACATTTGCCAGAGCTATAAACCGGGTGGCATaGTGTGCATTTTCCTGTAGAATGATATGGTTTCGA +
Preference number: 3 (lower is better)
Translates to: FPTFARAINRVA*CAFSCRMIWFR
Trigger: TCGAAACCATATCATTCTACAGGAAAATGCACAGCATGCCACCCGGTTTATAGCTCTGGCAAATGTTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
3UTR GCA 72 bp CTTTTCTCCTGTGTCAAGTTCAACATAAAAATATGCTaGTCCTGGCTGTGCAATCTGCTTGATGTCAGAGTG +
Preference number: 3 (lower is better)
Translates to: LFSCVKFNIKIC*SWLCNLLDVRV
Trigger: CACTCTGACATCAAGCAGATTGCACAGCCAGGAGCAGCATATTTTTATGTTGAACTTGACACAGGAGAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
3UTR CCA 72 bp ATAATAGGTCTTTTCCAAAGCAGCAAAATGGTATCTTaGTTTCAAGCCCGTGGCAAGACTGGAAACCAAAGC +
Preference number: 3 (lower is better)
Translates to: IIGLFQSSKMVS*FQARGKTGNQS
Trigger: GCTTTGGTTTCCAGTCTTGCCACGGGCTTGAAACCAAGATACCATTTTGCTGCTTTGGAAAAGACCTATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468709.5
3UTR CCA 72 bp GCTTTGGATGAGGAGAAGATTTGCTATCTCTACCTGTaGATGAACGCTTCCTTCCCTGCTTTTCATTTAAAT +
Preference number: 3 (lower is better)
Translates to: ALDEEKICYLYL*MNASFPAFHLN
Trigger: ATTTAAATGAAAAGCAGGGAAGGAAGCGTTCATCCACAGGTAGAGATAGCAAATCTTCTCCTCATCCAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR TCA 90 bp GTCATAGGGCTCAAAGTCTTTCCGGAAGCGGCGAGCCAGGGTCTCCTCGTCTTCCAGGGTCCTGGAGGCTaGGGAGGTTTGCGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: VIGLKVFPEAASQGLLVFQGPGG*GGLRGC
Trigger: GCAGCCTCGCAAACCTCCTCAGCCTCCAGGACCCTG...GAAGACGAGGAGACCCTGGCTCGCCGCTTCCGGAAAGACTTTGAGCCCTATGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468709.5
CDS-3UTR TCA 90 bp TCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCCATGGGAGATTGTAGTCAGGGTCCTGGAGGCTaGGGAGGTTTGCGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SMGLHKRGRETVPMGDCSQGPGG*GGLRGC
Trigger: GCAGCCTCGCAAACCTCCTCAGCCTCCAGGACCCTG...ACTACAATCTCCCATGGGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR CCA 90 bp GTCATAGGGCTCAAAGTCTTTCCGGAAGCGGCGAGCCAGGGTCTCCTCGTCTTCCAGGCTGGAGTGCAATaGAGCGATCTTGGCTCATGC +
Preference number: 4 (lower is better)
Translates to: VIGLKVFPEAASQGLLVFQAGVQ*SDLGSC
Trigger: GCATGAGCCAAGATCGCTCCATTGCACTCCAGCCTG...GAAGACGAGGAGACCCTGGCTCGCCGCTTCCGGAAAGACTTTGAGCCCTATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482452.5
CDS-3UTR TCA 90 bp GTCATAGGGCTCAAAGTCTTTCCGGAAGCGGCGAGCCAGGGTCTCCTCGTCTTCGCTGTGCAATCTGCTTaGTGTCAGAGTGCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: VIGLKVFPEAASQGLLVFAVQSA*CQSALG
Trigger: TCCCAGAGCACTCTGACATCAAGCAGATTGCACAGC...GAAGACGAGGAGACCCTGGCTCGCCGCTTCCGGAAAGACTTTGAGCCCTATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR TCA 90 bp TCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCCATGGGAGATTGTAGTACTCCTCACCTCAGGTaGTCCACCTGCCTCGGCTTC +
Preference number: 4 (lower is better)
Translates to: SMGLHKRGRETVPMGDCSTPHLR*STCLGF
Trigger: GAAGCCGAGGCAGGTGGATCACCTGAGGTGAGGAGT...ACTACAATCTCCCATGGGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR CCA 90 bp AAGTTCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCCATGGGAGATTGAAACCAGCAGGGTCCTaGAGGCTGAGGAGGTTTGCG +
Preference number: 4 (lower is better)
Translates to: KFHGTAQKRQGNSPHGRLKPAGS*RLRRFA
Trigger: CGCAAACCTCCTCAGCCTCCAGGACCCTGCTGGTTT...CAATCTCCCATGGGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR TCA 90 bp AAGTTCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCCATGGGAGATTGGCCCCGAGCTTCCAGTaGAGATACCTTTACGACCCA +
Preference number: 4 (lower is better)
Translates to: KFHGTAQKRQGNSPHGRLAPSFQ*RYLYDP
Trigger: TGGGTCGTAAAGGTATCTTCACTGGAAGCTCGGGGC...CAATCTCCCATGGGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354105.10
CDS-3UTR TCA 90 bp AAGTTCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCCATGGGAGATTGCCTCGTCTTCCTTGCTaGTCTGACACTGCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: KFHGTAQKRQGNSPHGRLPRLPC*SDTASS
Trigger: ACTGGAGGCAGTGTCAGATCAGCAAGGAAGACGAGG...CAATCTCCCATGGGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR TCA 90 bp CTTGCTGTAGGCAAGTTCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCGCAATCCTGCTTGGGTaGCAGAGCGAGACTTTGTCT +
Preference number: 4 (lower is better)
Translates to: LAVGKFHGTAQKRQGNSPAILLG*QSETLS
Trigger: AGACAAAGTCTCGCTCTGTCACCCAAGCAGGATTGC...GGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGAACTTGCCTACAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR GCA 90 bp TCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCCATGGGAGATTGTAGTCTGAGGTACACAATCTaGAGCCCCGAGCTTCCAGTG +
Preference number: 4 (lower is better)
Translates to: SMGLHKRGRETVPMGDCSLRYTI*SPELPV
Trigger: CACTGGAAGCTCGGGGCTGCAGATTGTGTACCTCAG...ACTACAATCTCCCATGGGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354105.10
CDS-3UTR GCA 90 bp AAGTTCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCCATGGGAGATTGGAGGCTGAGGAGGTTTaGGAGGCTGCTTTGGATGAG +
Preference number: 4 (lower is better)
Translates to: KFHGTAQKRQGNSPHGRLEAEEV*EAALDE
Trigger: CTCATCCAAAGCAGCCTCGCAAACCTCCTCAGCCTC...CAATCTCCCATGGGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR GCA 90 bp CTTGCTGTAGGCAAGTTCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCTCCAACAGCTCTATCTaGTGCTCCTGTGCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: LAVGKFHGTAQKRQGNSPSNSSI*CSCAWV
Trigger: TACCCAGGCACAGGAGCAGCAGATAGAGCTGTTGGA...GGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGAACTTGCCTACAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR GCA 90 bp CTGCTTGATGTCAGAGTGCTCTGGGATTTCCAACAGCTCTATCTGCTGCTCCTGTCCTGGAGGGAGGTTTaGGAGGCTGCTTTGGATGAG +
Preference number: 4 (lower is better)
Translates to: LLDVRVLWDFQQLYLLLLSWREV*EAALDE
Trigger: CTCATCCAAAGCAGCCTCGCAAACCTCCCTCCAGGA...CAGGAGCAGCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGACATCAAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482452.5
CDS-3UTR CCA 90 bp ATGTCAGAGTGCTCTGGGATTTCCAACAGCTCTATCTGCTGCTCCTGTGCCTGGAGCCCGTGGCAAGACTaGAAACCAAAGCAGAACCAC +
Preference number: 4 (lower is better)
Translates to: MSECSGISNSSICCSCAWSPWQD*KPKQNH
Trigger: GTGGTTCTGCTTTGGTTTCCAGTCTTGCCACGGGCT...CCAGGCACAGGAGCAGCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR TCA 90 bp TCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCCATGGGAGATTGTAGTAGGATTCTGTCCCACTaGGGTACACAATCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: SMGLHKRGRETVPMGDCSRILSH*GTQSAA
Trigger: GGCTGCAGATTGTGTACCTCAGTGGGACAGAATCCT...ACTACAATCTCCCATGGGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354105.10
CDS-3UTR TCA 90 bp GTTCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCCATGGGAGATTGTATGGGCCATGGGGATGTaGGCAAGATATCAACACCCT +
Preference number: 4 (lower is better)
Translates to: VPWDCTKEAGKQSPWEIVWAMGM*ARYQHP
Trigger: AGGGTGTTGATATCTTGCTCACATCCCCATGGCCCA...TACAATCTCCCATGGGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354105.10
CDS-3UTR TCA 90 bp CTTGCTGTAGGCAAGTTCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCGAAAAACTGACAGGCTaGTTCTTCCACAGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: LAVGKFHGTAQKRQGNSPEKLTG*FFHRGK
Trigger: CTTGCCCCTGTGGAAGAATCAGCCTGTCAGTTTTTC...GGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGAACTTGCCTACAGCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR TCA 90 bp GTTCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCCATGGGAGATTGTAGCTGTGCAATCTGCTTaGTGTCAGAGTGCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: VPWDCTKEAGKQSPWEIVAVQSA*CQSALG
Trigger: TCCCAGAGCACTCTGACATCAAGCAGATTGCACAGC...TACAATCTCCCATGGGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR TCA 90 bp CTGCTTGATGTCAGAGTGCTCTGGGATTTCCAACAGCTCTATCTGCTGCTCCTGGCTGTGCAATCTGCTTaGTGTCAGAGTGCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: LLDVRVLWDFQQLYLLLLAVQSA*CQSALG
Trigger: TCCCAGAGCACTCTGACATCAAGCAGATTGCACAGC...CAGGAGCAGCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGACATCAAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR TCA 90 bp CAGGCTGATTCTTCCACAGGGGCAAGAATTTGCTTTCCTATGGATGCTTCCTGCCCTCGTCTTCCTTGCTaGTCTGACACTGCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: QADSSTGARICFPMDASCPRLPC*SDTASS
Trigger: ACTGGAGGCAGTGTCAGATCAGCAAGGAAGACGAGG...GCAGGAAGCATCCATAGGAAAGCAAATTCTTGCCCCTGTGGAAGAATCAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR TCA 90 bp ATGTCATCAGTAGTAGAGCAGCTGATTGGGACAGGAATGACCTGTAGCTGGAGGCCTCGTCTTCCTTGCTaGTCTGACACTGCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: MSSVVEQLIGTGMTCSWRPRLPC*SDTASS
Trigger: ACTGGAGGCAGTGTCAGATCAGCAAGGAAGACGAGG...CCTCCAGCTACAGGTCATTCCTGTCCCAATCAGCTGCTCTACTACTGATGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR GCA 90 bp TGGGATTTCCAACAGCTCTATCTGCTGCTCCTGTGCCTGGGTAATGAAGGCATCTCCAACAGCTCTATCTaGTGCTCCTGTGCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: WDFQQLYLLLLCLGNEGISNSSI*CSCAWV
Trigger: TACCCAGGCACAGGAGCAGCAGATAGAGCTGTTGGA...GATGCCTTCATTACCCAGGCACAGGAGCAGCAGATAGAGCTGTTGGAAATCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR GCA 90 bp CTTGCTGTAGGCAAGTTCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCCCACAGTTATGCCACTaGAATCCTGCTTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: LAVGKFHGTAQKRQGNSPPQLCH*NPAWVT
Trigger: TGTCACCCAAGCAGGATTGCAGTGGCATAACTGTGG...GGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGAACTTGCCTACAGCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR GCA 90 bp AATCTTAGGCCTCTTGCTGTAGGCAAGTTCCATGGGACTGCACAAAAGAGGCAGTCACCCAGGCTGGAGTaGAATGGAGCGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: NLRPLAVGKFHGTAQKRQSPRLE*NGAILA
Trigger: AGCCAAGATCGCTCCATTGCACTCCAGCCTGGGTGA...CTGCCTCTTTTGTGCAGTCCCATGGAACTTGCCTACAGCAAGAGGCCTAAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR CCA 90 bp GTCATAGGGCTCAAAGTCTTTCCGGAAGCGGCGAGCCAGGGTCTCCTCGTCTTCGAATTTGCTTTCCTATaGATGCTTCCTGCCCAGATT +
Preference number: 4 (lower is better)
Translates to: VIGLKVFPEAASQGLLVFEFAFL*MLPAQI
Trigger: AATCTGGGCAGGAAGCATCCATAGGAAAGCAAATTC...GAAGACGAGGAGACCCTGGCTCGCCGCTTCCGGAAAGACTTTGAGCCCTATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CCA 90 bp CCATTTCCCTCGACTCTTAAAGAACCGTCTCAGAGTGGCCTTATACTTCTCCACAAACCAGCAGGGTCCTaGAGGCTGAGGAGGTTTGCG +
Preference number: 4 (lower is better)
Translates to: PFPSTLKEPSQSGLILLHKPAGS*RLRRFA
Trigger: CGCAAACCTCCTCAGCCTCCAGGACCCTGCTGGTTT...GTGGAGAAGTATAAGGCCACTCTGAGACGGTTCTTTAAGAGTCGAGGGAAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468709.5
CDS-3UTR CCA 90 bp TGTCAGAGTGCTCTGGGATTTCCAACAGCTCTATCTGCTGCTCCTGTGCCTGGGTGCTGCTCCTGTGCCTaGGTAATGAAGGCATCTTTA +
Preference number: 4 (lower is better)
Translates to: CQSALGFPTALSAAPVPGCCSCA*VMKASL
Trigger: TAAAGATGCCTTCATTACCCAGGCACAGGAGCAGCA...CCCAGGCACAGGAGCAGCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CCA 90 bp TGTGCAATCTGCTTGATGTCAGAGTGCTCTGGGATTTCCAACAGCTCTATCTGCAAACCAGCAGGGTCCTaGAGGGAGGTTTGCGAGGCT +
Preference number: 4 (lower is better)
Translates to: CAICLMSECSGISNSSICKPAGS*REVCEA
Trigger: AGCCTCGCAAACCTCCCTCCAGGACCCTGCTGGTTT...GCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGACATCAAGCAGATTGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482452.5
CDS-3UTR TCA 90 bp TGGGATTTCCAACAGCTCTATCTGCTGCTCCTGTGCCTGGGTAATGAAGGCATCGAAAAACTGACAGGCTaGTTCTTCCACAGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: WDFQQLYLLLLCLGNEGIEKLTG*FFHRGK
Trigger: CTTGCCCCTGTGGAAGAATCAGCCTGTCAGTTTTTC...GATGCCTTCATTACCCAGGCACAGGAGCAGCAGATAGAGCTGTTGGAAATCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR GCA 90 bp TGGCTGTGCAATCTGCTTGATGTCAGAGTGCTCTGGGATTTCCAACAGCTCTATGAGGCTGAGGAGGTTTaGGAGGCTGCTTTGGATGAG +
Preference number: 4 (lower is better)
Translates to: WLCNLLDVRVLWDFQQLYEAEEV*EAALDE
Trigger: CTCATCCAAAGCAGCCTCGCAAACCTCCTCAGCCTC...ATAGAGCTGTTGGAAATCCCAGAGCACTCTGACATCAAGCAGATTGCACAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468709.5
CDS-3UTR GCA 90 bp GTTCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCCATGGGAGATTGTATATCTGCTGCTCCTGTaGCTGGGTAATGAAGGCATC +
Preference number: 4 (lower is better)
Translates to: VPWDCTKEAGKQSPWEIVYLLLL*LGNEGI
Trigger: GATGCCTTCATTACCCAGGCACAGGAGCAGCAGATA...TACAATCTCCCATGGGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR GCA 90 bp GTTCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCCATGGGAGATTGTAAACAGCTCTATCTGCTaGTCCTGTGCCTGGGTAATG +
Preference number: 4 (lower is better)
Translates to: VPWDCTKEAGKQSPWEIVNSSIC*SCAWVM
Trigger: CATTACCCAGGCACAGGAGCAGCAGATAGAGCTGTT...TACAATCTCCCATGGGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR GCA 90 bp CTGCTTGATGTCAGAGTGCTCTGGGATTTCCAACAGCTCTATCTGCTGCTCCTGTGCTGCTCCTGGCTGTaGAATCTGCTTGATGTCAGA +
Preference number: 4 (lower is better)
Translates to: LLDVRVLWDFQQLYLLLLCCSWL*NLLDVR
Trigger: TCTGACATCAAGCAGATTGCACAGCCAGGAGCAGCA...CAGGAGCAGCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGACATCAAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR GCA 90 bp CCTCCAGTCAGACTTATCAGGAACATTAAGGATGGCTTCACTGGCCAGGACCTCTGCTGCTCCTGGCTGTaGAATCTGCTTGATGTCAGA +
Preference number: 4 (lower is better)
Translates to: PPVRLIRNIKDGFTGQDLCCSWL*NLLDVR
Trigger: TCTGACATCAAGCAGATTGCACAGCCAGGAGCAGCA...GAGGTCCTGGCCAGTGAAGCCATCCTTAATGTTCCTGATAAGTCTGACTGGAGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR GCA 90 bp TGGGATTTCCAACAGCTCTATCTGCTGCTCCTGTGCCTGGGTAATGAAGGCATCCCACAGTTATGCCACTaGAATCCTGCTTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: WDFQQLYLLLLCLGNEGIPQLCH*NPAWVT
Trigger: TGTCACCCAAGCAGGATTGCAGTGGCATAACTGTGG...GATGCCTTCATTACCCAGGCACAGGAGCAGCAGATAGAGCTGTTGGAAATCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468709.5
CDS-3UTR GCA 90 bp CTTGCTGTAGGCAAGTTCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCCAAGTTCCATGGGACTaGACAAAAGAGGCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: LAVGKFHGTAQKRQGNSPQVPWD*TKEAGK
Trigger: TTTCCCTGCCTCTTTTGTGCAGTCCCATGGAACTTG...GGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGAACTTGCCTACAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR GCA 90 bp CCATTTCCCTCGACTCTTAAAGAACCGTCTCAGAGTGGCCTTATACTTCTCCACTCACCCAGGCTGGAGTaGAATGGAGCGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: PFPSTLKEPSQSGLILLHSPRLE*NGAILA
Trigger: AGCCAAGATCGCTCCATTGCACTCCAGCCTGGGTGA...GTGGAGAAGTATAAGGCCACTCTGAGACGGTTCTTTAAGAGTCGAGGGAAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CCA 90 bp ATGTCAGAGTGCTCTGGGATTTCCAACAGCTCTATCTGCTGCTCCTGTGCCTGGTTGGTTTCAAGCCCGTaGCAAGACTGGAAACCAAAG +
Preference number: 4 (lower is better)
Translates to: MSECSGISNSSICCSCAWLVSSP*QDWKPK
Trigger: CTTTGGTTTCCAGTCTTGCCACGGGCTTGAAACCAA...CCAGGCACAGGAGCAGCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CCA 90 bp CTGCTTGATGTCAGAGTGCTCTGGGATTTCCAACAGCTCTATCTGCTGCTCCTGCAGATAAGCCTCCTTTaGCCAGGGCAAGGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: LLDVRVLWDFQQLYLLLLQISLL*PGQGSN
Trigger: ATTGCTACCTTGCCCTGGCCAAAGGAGGCTTATCTG...CAGGAGCAGCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGACATCAAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CCA 90 bp CTTGCTGTAGGCAAGTTCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCAGAACCGTCTCAGAGTaGCCTTATACTTCTCCACCT +
Preference number: 4 (lower is better)
Translates to: LAVGKFHGTAQKRQGNSPRTVSE*PYTSPP
Trigger: AGGTGGAGAAGTATAAGGCCACTCTGAGACGGTTCT...GGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGAACTTGCCTACAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR CCA 90 bp CTTGCTGTAGGCAAGTTCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCTGCTGCTCCTGTGCCTaGGTAATGAAGGCATCTTTA +
Preference number: 4 (lower is better)
Translates to: LAVGKFHGTAQKRQGNSPCCSCA*VMKASL
Trigger: TAAAGATGCCTTCATTACCCAGGCACAGGAGCAGCA...GGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGAACTTGCCTACAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR TCA 90 bp GTCATAGGGCTCAAAGTCTTTCCGGAAGCGGCGAGCCAGGGTCTCCTCGTCTTCTCATGGGAACAATACTaGACGCGTAAAGATACTTTT +
Preference number: 4 (lower is better)
Translates to: VIGLKVFPEAASQGLLVFSWEQY*TRKDTF
Trigger: AAAAGTATCTTTACGCGTTCAGTATTGTTCCCATGA...GAAGACGAGGAGACCCTGGCTCGCCGCTTCCGGAAAGACTTTGAGCCCTATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR TCA 90 bp CTTGCTGTAGGCAAGTTCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCTGTAAGGGTTTTCAGTaGCATCCGGAGGCTGTTTTA +
Preference number: 4 (lower is better)
Translates to: LAVGKFHGTAQKRQGNSPCKGFQ*HPEAVL
Trigger: TAAAACAGCCTCCGGATGTCACTGAAAACCCTTACA...GGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGAACTTGCCTACAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR GCA 90 bp CTTGCTGTAGGCAAGTTCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCACAGGGGCAAGAATTTaGTTTCCTATGGATGCTTCC +
Preference number: 4 (lower is better)
Translates to: LAVGKFHGTAQKRQGNSPTGARI*FPMDAS
Trigger: GGAAGCATCCATAGGAAAGCAAATTCTTGCCCCTGT...GGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGAACTTGCCTACAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR GCA 90 bp ATGTCATCAGTAGTAGAGCAGCTGATTGGGACAGGAATGACCTGTAGCTGGAGGTATCTGCTGCTCCTGTaGCTGGGTAATGAAGGCATC +
Preference number: 4 (lower is better)
Translates to: MSSVVEQLIGTGMTCSWRYLLLL*LGNEGI
Trigger: GATGCCTTCATTACCCAGGCACAGGAGCAGCAGATA...CCTCCAGCTACAGGTCATTCCTGTCCCAATCAGCTGCTCTACTACTGATGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR GCA 90 bp CAGGCTGATTCTTCCACAGGGGCAAGAATTTGCTTTCCTATGGATGCTTCCTGCAACAGCTCTATCTGCTaGTCCTGTGCCTGGGTAATG +
Preference number: 4 (lower is better)
Translates to: QADSSTGARICFPMDASCNSSIC*SCAWVM
Trigger: CATTACCCAGGCACAGGAGCAGCAGATAGAGCTGTT...GCAGGAAGCATCCATAGGAAAGCAAATTCTTGCCCCTGTGGAAGAATCAGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR GCA 90 bp TCCTATGGATGCTTCCTGCCCAGATTTTCTGTAAGGGTTTTCAGTGACATCCGGTCCAACAGCTCTATCTaGTGCTCCTGTGCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: SYGCFLPRFSVRVFSDIRSNSSI*CSCAWV
Trigger: TACCCAGGCACAGGAGCAGCAGATAGAGCTGTTGGA...CCGGATGTCACTGAAAACCCTTACAGAAAATCTGGGCAGGAAGCATCCATAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR GCA 90 bp TCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCCATGGGAGATTGTAGTTGCTTGATGTCAGAGTaGTCTGGGATTTCCAACAGC +
Preference number: 4 (lower is better)
Translates to: SMGLHKRGRETVPMGDCSCLMSE*SGISNS
Trigger: GCTGTTGGAAATCCCAGAGCACTCTGACATCAAGCA...ACTACAATCTCCCATGGGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR GCA 90 bp TGGGATTTCCAACAGCTCTATCTGCTGCTCCTGTGCCTGGGTAATGAAGGCATCTGCTTGATGTCAGAGTaGTCTGGGATTTCCAACAGC +
Preference number: 4 (lower is better)
Translates to: WDFQQLYLLLLCLGNEGICLMSE*SGISNS
Trigger: GCTGTTGGAAATCCCAGAGCACTCTGACATCAAGCA...GATGCCTTCATTACCCAGGCACAGGAGCAGCAGATAGAGCTGTTGGAAATCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CCA 90 bp AAGTTCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCCATGGGAGATTGTTGGTTTCAAGCCCGTaGCAAGACTGGAAACCAAAG +
Preference number: 4 (lower is better)
Translates to: KFHGTAQKRQGNSPHGRLLVSSP*QDWKPK
Trigger: CTTTGGTTTCCAGTCTTGCCACGGGCTTGAAACCAA...CAATCTCCCATGGGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR CCA 90 bp ATGTCAGAGTGCTCTGGGATTTCCAACAGCTCTATCTGCTGCTCCTGTGCCTGGAGCAAAATGGTATCTTaGTTTCAAGCCCGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: MSECSGISNSSICCSCAWSKMVS*FQARGK
Trigger: CTTGCCACGGGCTTGAAACCAAGATACCATTTTGCT...CCAGGCACAGGAGCAGCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CCA 90 bp TCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCCATGGGAGATTGTAGTTGCTATCTCTACCTGTaGATGAACGCTTCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: SMGLHKRGRETVPMGDCSCYLYL*MNASFP
Trigger: AGGGAAGGAAGCGTTCATCCACAGGTAGAGATAGCA...ACTACAATCTCCCATGGGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR CCA 90 bp TGGGATTTCCAACAGCTCTATCTGCTGCTCCTGTGCCTGGGTAATGAAGGCATCTGCTATCTCTACCTGTaGATGAACGCTTCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: WDFQQLYLLLLCLGNEGICYLYL*MNASFP
Trigger: AGGGAAGGAAGCGTTCATCCACAGGTAGAGATAGCA...GATGCCTTCATTACCCAGGCACAGGAGCAGCAGATAGAGCTGTTGGAAATCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CCA 90 bp TCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCCATGGGAGATTGTAGTTGTAGGCAAGTTCCATaGGACTGCACAAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: SMGLHKRGRETVPMGDCSCRQVP*DCTKEA
Trigger: TGCCTCTTTTGTGCAGTCCCATGGAACTTGCCTACA...ACTACAATCTCCCATGGGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR CCA 90 bp CTTGCTGTAGGCAAGTTCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCAGCTGTACTTGGAGCTaGATAACAGACATAGGAGCT +
Preference number: 4 (lower is better)
Translates to: LAVGKFHGTAQKRQGNSPSCTWS*ITDIGA
Trigger: AGCTCCTATGTCTGTTATCCAGCTCCAAGTACAGCT...GGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGAACTTGCCTACAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR TCA 90 bp CTTGCTGTAGGCAAGTTCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCCCAAGCACATATGTCTaGATAGGAGCTTTCTTGATG +
Preference number: 4 (lower is better)
Translates to: LAVGKFHGTAQKRQGNSPPSTYV*IGAFLM
Trigger: CATCAAGAAAGCTCCTATTCAGACATATGTGCTTGG...GGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGAACTTGCCTACAGCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR TCA 90 bp GTTCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCCATGGGAGATTGTATGTAAGGGTTTTCAGTaGCATCCGGAGGCTGTTTTA +
Preference number: 4 (lower is better)
Translates to: VPWDCTKEAGKQSPWEIVCKGFQ*HPEAVL
Trigger: TAAAACAGCCTCCGGATGTCACTGAAAACCCTTACA...TACAATCTCCCATGGGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR TCA 90 bp TGTGCAATCTGCTTGATGTCAGAGTGCTCTGGGATTTCCAACAGCTCTATCTGCGAAAAACTGACAGGCTaGTTCTTCCACAGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: CAICLMSECSGISNSSICEKLTG*FFHRGK
Trigger: CTTGCCCCTGTGGAAGAATCAGCCTGTCAGTTTTTC...GCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGACATCAAGCAGATTGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR TCA 90 bp ATTTCCAACATTTGCCAGAGCTATAAACCGGGTGGCATGCTGTGCATTTTCCTGGCAATCCTGCTTGGGTaGCAGAGCGAGACTTTGTCT +
Preference number: 4 (lower is better)
Translates to: ISNICQSYKPGGMLCIFLAILLG*QSETLS
Trigger: AGACAAAGTCTCGCTCTGTCACCCAAGCAGGATTGC...CAGGAAAATGCACAGCATGCCACCCGGTTTATAGCTCTGGCAAATGTTGGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR GCA 90 bp TCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCCATGGGAGATTGTAGTCCGAATAGTATGGGTTaGGACTGCCACCTAAAATTG +
Preference number: 4 (lower is better)
Translates to: SMGLHKRGRETVPMGDCSPNSMG*DCHLKL
Trigger: CAATTTTAGGTGGCAGTCGCAACCCATACTATTCGG...ACTACAATCTCCCATGGGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR GCA 90 bp CACTGCCTCCAGTCAGACTTATCAGGAACATTAAGGATGGCTTCACTGGCCAGGCCGAATAGTATGGGTTaGGACTGCCACCTAAAATTG +
Preference number: 4 (lower is better)
Translates to: HCLQSDLSGTLRMASLARPNSMG*DCHLKL
Trigger: CAATTTTAGGTGGCAGTCGCAACCCATACTATTCGG...CCTGGCCAGTGAAGCCATCCTTAATGTTCCTGATAAGTCTGACTGGAGGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468709.5
CDS-3UTR GCA 90 bp CCTCCAGTCAGACTTATCAGGAACATTAAGGATGGCTTCACTGGCCAGGACCTCATAAACCGGGTGGCATaGTGTGCATTTTCCTGTAGA +
Preference number: 4 (lower is better)
Translates to: PPVRLIRNIKDGFTGQDLINRVA*CAFSCR
Trigger: TCTACAGGAAAATGCACAGCATGCCACCCGGTTTAT...GAGGTCCTGGCCAGTGAAGCCATCCTTAATGTTCCTGATAAGTCTGACTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR GCA 90 bp CTTGCTGTAGGCAAGTTCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCTGGATTTCCAACATTTaGCAGAGCTATAAACCGGGT +
Preference number: 4 (lower is better)
Translates to: LAVGKFHGTAQKRQGNSPWISNI*QSYKPG
Trigger: ACCCGGTTTATAGCTCTGGCAAATGTTGGAAATCCA...GGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGAACTTGCCTACAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR GCA 90 bp ATGTCAGAGTGCTCTGGGATTTCCAACAGCTCTATCTGCTGCTCCTGTGCCTGGTGGATTTCCAACATTTaGCAGAGCTATAAACCGGGT +
Preference number: 4 (lower is better)
Translates to: MSECSGISNSSICCSCAWWISNI*QSYKPG
Trigger: ACCCGGTTTATAGCTCTGGCAAATGTTGGAAATCCA...CCAGGCACAGGAGCAGCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR GCA 90 bp TCAGAGTGCTCTGGGATTTCCAACAGCTCTATCTGCTGCTCCTGTGCCTGGGTAGATGAGGAGAAGATTTaGTATCTCTACCTGTGGATG +
Preference number: 4 (lower is better)
Translates to: SECSGISNSSICCSCAWVDEEKI*YLYLWM
Trigger: CATCCACAGGTAGAGATAGCAAATCTTCTCCTCATC...TACCCAGGCACAGGAGCAGCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CCA 90 bp TCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCCATGGGAGATTGTAGTTCAACACCCTTAAACTaGGAGGTTGTACACAGCATC +
Preference number: 4 (lower is better)
Translates to: SMGLHKRGRETVPMGDCSSTPLN*EVVHSI
Trigger: GATGCTGTGTACAACCTCCCAGTTTAAGGGTGTTGA...ACTACAATCTCCCATGGGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354105.10
CDS-3UTR CCA 90 bp TGGATTTCCAACATTTGCCAGAGCTATAAACCGGGTGGCATGCTGTGCATTTTCAGCCCGTGGCAAGACTaGAAACCAAAGCAGAACCAC +
Preference number: 4 (lower is better)
Translates to: WISNICQSYKPGGMLCIFSPWQD*KPKQNH
Trigger: GTGGTTCTGCTTTGGTTTCCAGTCTTGCCACGGGCT...GAAAATGCACAGCATGCCACCCGGTTTATAGCTCTGGCAAATGTTGGAAATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CCA 90 bp GTTCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCCATGGGAGATTGTAGATGTCAGAGTGCTCTaGGATTTCCAACAGCTCTAT +
Preference number: 4 (lower is better)
Translates to: VPWDCTKEAGKQSPWEIVDVRVL*DFQQLY
Trigger: ATAGAGCTGTTGGAAATCCCAGAGCACTCTGACATC...TACAATCTCCCATGGGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR CCA 90 bp TGTCAGAGTGCTCTGGGATTTCCAACAGCTCTATCTGCTGCTCCTGTGCCTGGGATTCAGCATCTTGGGTaGAGCCAAAGAAATTTCATC +
Preference number: 4 (lower is better)
Translates to: CQSALGFPTALSAAPVPGIQHLG*SQRNFI
Trigger: GATGAAATTTCTTTGGCTCCACCCAAGATGCTGAAT...CCCAGGCACAGGAGCAGCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468709.5
CDS-3UTR TCA 90 bp TGTCAGAGTGCTCTGGGATTTCCAACAGCTCTATCTGCTGCTCCTGTGCCTGGGTCATGGGAACAATACTaGACGCGTAAAGATACTTTT +
Preference number: 4 (lower is better)
Translates to: CQSALGFPTALSAAPVPGSWEQY*TRKDTF
Trigger: AAAAGTATCTTTACGCGTTCAGTATTGTTCCCATGA...CCCAGGCACAGGAGCAGCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR TCA 90 bp GTTCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCCATGGGAGATTGTAAATGTGTGCCGATGTTaGCCACCAAATGTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: VPWDCTKEAGKQSPWEIVNVCRC*PPNVFP
Trigger: TGGAAAAACATTTGGTGGTCAACATCGGCACACATT...TACAATCTCCCATGGGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR TCA 90 bp GAAGGCATCTTTAATGTCATCAGTAGTAGAGCAGCTGATTGGGACAGGAATGACGCAATCCTGCTTGGGTaGCAGAGCGAGACTTTGTCT +
Preference number: 4 (lower is better)
Translates to: EGIFNVISSRAADWDRNDAILLG*QSETLS
Trigger: AGACAAAGTCTCGCTCTGTCACCCAAGCAGGATTGC...GTCATTCCTGTCCCAATCAGCTGCTCTACTACTGATGACATTAAAGATGCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR GCA 90 bp TCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCCATGGGAGATTGTAGTTTGCTTTCCTATGGATaGTTCCTGCCCAGATTTTCT +
Preference number: 4 (lower is better)
Translates to: SMGLHKRGRETVPMGDCSLLSYG*FLPRFS
Trigger: AGAAAATCTGGGCAGGAAGCATCCATAGGAAAGCAA...ACTACAATCTCCCATGGGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR GCA 90 bp GTTCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCCATGGGAGATTGTAGATGAGGAGAAGATTTaGTATCTCTACCTGTGGATG +
Preference number: 4 (lower is better)
Translates to: VPWDCTKEAGKQSPWEIVDEEKI*YLYLWM
Trigger: CATCCACAGGTAGAGATAGCAAATCTTCTCCTCATC...TACAATCTCCCATGGGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR CCA 90 bp AATCTTAGGCCTCTTGCTGTAGGCAAGTTCCATGGGACTGCACAAAAGAGGCAGAGCAAAATGGTATCTTaGTTTCAAGCCCGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: NLRPLAVGKFHGTAQKRQSKMVS*FQARGK
Trigger: CTTGCCACGGGCTTGAAACCAAGATACCATTTTGCT...CTGCCTCTTTTGTGCAGTCCCATGGAACTTGCCTACAGCAAGAGGCCTAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR CCA 90 bp TCAGAGTGCTCTGGGATTTCCAACAGCTCTATCTGCTGCTCCTGTGCCTGGGTATCCTGTAGAATGATATaGTTTCGATATGGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: SECSGISNSSICCSCAWVSCRMI*FRYGSL
Trigger: GAGGCTTCCATATCGAAACCATATCATTCTACAGGA...TACCCAGGCACAGGAGCAGCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CCA 90 bp AAGTTCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCCATGGGAGATTGGAATTTGCTTTCCTATaGATGCTTCCTGCCCAGATT +
Preference number: 4 (lower is better)
Translates to: KFHGTAQKRQGNSPHGRLEFAFL*MLPAQI
Trigger: AATCTGGGCAGGAAGCATCCATAGGAAAGCAAATTC...CAATCTCCCATGGGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR CCA 90 bp CTGCTTGATGTCAGAGTGCTCTGGGATTTCCAACAGCTCTATCTGCTGCTCCTGGAATTTGCTTTCCTATaGATGCTTCCTGCCCAGATT +
Preference number: 4 (lower is better)
Translates to: LLDVRVLWDFQQLYLLLLEFAFL*MLPAQI
Trigger: AATCTGGGCAGGAAGCATCCATAGGAAAGCAAATTC...CAGGAGCAGCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGACATCAAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CCA 90 bp AAGTTCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCCATGGGAGATTGGGGAAACAGTCCCCATaGGAGATTGTAGTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: KFHGTAQKRQGNSPHGRLGKQSP*EIVVSL
Trigger: TAAAGAAACTACAATCTCCCATGGGGACTGTTTCCC...CAATCTCCCATGGGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR CCA 90 bp TCCTATGGATGCTTCCTGCCCAGATTTTCTGTAAGGGTTTTCAGTGACATCCGGTGTAGGCAAGTTCCATaGGACTGCACAAAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: SYGCFLPRFSVRVFSDIRCRQVP*DCTKEA
Trigger: TGCCTCTTTTGTGCAGTCCCATGGAACTTGCCTACA...CCGGATGTCACTGAAAACCCTTACAGAAAATCTGGGCAGGAAGCATCCATAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000468709.5
CDS-3UTR CCA 90 bp CTTGCTGTAGGCAAGTTCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCTACACAAGCTGTACTTaGAGCTGGATAACAGACATA +
Preference number: 4 (lower is better)
Translates to: LAVGKFHGTAQKRQGNSPYTSCT*SWITDI
Trigger: TATGTCTGTTATCCAGCTCCAAGTACAGCTTGTGTA...GGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGAACTTGCCTACAGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR CCA 90 bp TCAGAGTGCTCTGGGATTTCCAACAGCTCTATCTGCTGCTCCTGTGCCTGGGTATACACAAGCTGTACTTaGAGCTGGATAACAGACATA +
Preference number: 4 (lower is better)
Translates to: SECSGISNSSICCSCAWVYTSCT*SWITDI
Trigger: TATGTCTGTTATCCAGCTCCAAGTACAGCTTGTGTA...TACCCAGGCACAGGAGCAGCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR TCA 90 bp AATCTTAGGCCTCTTGCTGTAGGCAAGTTCCATGGGACTGCACAAAAGAGGCAGAATGTGTGCCGATGTTaGCCACCAAATGTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: NLRPLAVGKFHGTAQKRQNVCRC*PPNVFP
Trigger: TGGAAAAACATTTGGTGGTCAACATCGGCACACATT...CTGCCTCTTTTGTGCAGTCCCATGGAACTTGCCTACAGCAAGAGGCCTAAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR TCA 90 bp ATGTCATCAGTAGTAGAGCAGCTGATTGGGACAGGAATGACCTGTAGCTGGAGGAATGTGTGCCGATGTTaGCCACCAAATGTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: MSSVVEQLIGTGMTCSWRNVCRC*PPNVFP
Trigger: TGGAAAAACATTTGGTGGTCAACATCGGCACACATT...CCTCCAGCTACAGGTCATTCCTGTCCCAATCAGCTGCTCTACTACTGATGACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR GCA 90 bp TCCTATGGATGCTTCCTGCCCAGATTTTCTGTAAGGGTTTTCAGTGACATCCGGACAGGGGCAAGAATTTaGTTTCCTATGGATGCTTCC +
Preference number: 4 (lower is better)
Translates to: SYGCFLPRFSVRVFSDIRTGARI*FPMDAS
Trigger: GGAAGCATCCATAGGAAAGCAAATTCTTGCCCCTGT...CCGGATGTCACTGAAAACCCTTACAGAAAATCTGGGCAGGAAGCATCCATAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR GCA 90 bp CCATTTCCCTCGACTCTTAAAGAACCGTCTCAGAGTGGCCTTATACTTCTCCACAGTATGGGTTGCGACTaGCACCTAAAATTGGGAATG +
Preference number: 4 (lower is better)
Translates to: PFPSTLKEPSQSGLILLHSMGCD*HLKLGM
Trigger: CATTCCCAATTTTAGGTGGCAGTCGCAACCCATACT...GTGGAGAAGTATAAGGCCACTCTGAGACGGTTCTTTAAGAGTCGAGGGAAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468709.5
CDS-3UTR CCA 90 bp GTTCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCCATGGGAGATTGTAATTCAGCATCTTGGGTaGAGCCAAAGAAATTTCCTA +
Preference number: 4 (lower is better)
Translates to: VPWDCTKEAGKQSPWEIVIQHLG*SQRNFL
Trigger: TAGGAAATTTCTTTGGCTCCACCCAAGATGCTGAAT...TACAATCTCCCATGGGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354105.10
CDS-3UTR CCA 90 bp AATCTTAGGCCTCTTGCTGTAGGCAAGTTCCATGGGACTGCACAAAAGAGGCAGTCCCATTCAGCATCTTaGGTGGAGCCAAAGAAATTT +
Preference number: 4 (lower is better)
Translates to: NLRPLAVGKFHGTAQKRQSHSAS*VEPKKF
Trigger: AAATTTCTTTGGCTCCACCCAAGATGCTGAATGGGA...CTGCCTCTTTTGTGCAGTCCCATGGAACTTGCCTACAGCAAGAGGCCTAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR CCA 90 bp AATCTTAGGCCTCTTGCTGTAGGCAAGTTCCATGGGACTGCACAAAAGAGGCAGTCCAAAGCAGCAAAATaGTATCTTGGTTTCAAGCCC +
Preference number: 4 (lower is better)
Translates to: NLRPLAVGKFHGTAQKRQSKAAK*YLGFKP
Trigger: GGGCTTGAAACCAAGATACCATTTTGCTGCTTTGGA...CTGCCTCTTTTGTGCAGTCCCATGGAACTTGCCTACAGCAAGAGGCCTAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR CCA 90 bp CTTGCTGTAGGCAAGTTCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCGATATGGTTTCGATATaGAAGCCTCTCATAATAGGT +
Preference number: 4 (lower is better)
Translates to: LAVGKFHGTAQKRQGNSPDMVSI*KPLIIG
Trigger: ACCTATTATGAGAGGCTTCCATATCGAAACCATATC...GGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGAACTTGCCTACAGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR CCA 90 bp TGGATTTCCAACATTTGCCAGAGCTATAAACCGGGTGGCATGCTGTGCATTTTCAGAACCGTCTCAGAGTaGCCTTATACTTCTCCACCT +
Preference number: 4 (lower is better)
Translates to: WISNICQSYKPGGMLCIFRTVSE*PYTSPP
Trigger: AGGTGGAGAAGTATAAGGCCACTCTGAGACGGTTCT...GAAAATGCACAGCATGCCACCCGGTTTATAGCTCTGGCAAATGTTGGAAATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CCA 90 bp ATTTCCAACATTTGCCAGAGCTATAAACCGGGTGGCATGCTGTGCATTTTCCTGTGCTGCTCCTGTGCCTaGGTAATGAAGGCATCTTTA +
Preference number: 4 (lower is better)
Translates to: ISNICQSYKPGGMLCIFLCCSCA*VMKASL
Trigger: TAAAGATGCCTTCATTACCCAGGCACAGGAGCAGCA...CAGGAAAATGCACAGCATGCCACCCGGTTTATAGCTCTGGCAAATGTTGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR TCA 90 bp TGGATTTCCAACATTTGCCAGAGCTATAAACCGGGTGGCATGCTGTGCATTTTCTGTAAGGGTTTTCAGTaGCATCCGGAGGCTGTTTTA +
Preference number: 4 (lower is better)
Translates to: WISNICQSYKPGGMLCIFCKGFQ*HPEAVL
Trigger: TAAAACAGCCTCCGGATGTCACTGAAAACCCTTACA...GAAAATGCACAGCATGCCACCCGGTTTATAGCTCTGGCAAATGTTGGAAATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR TCA 90 bp AATCTTAGGCCTCTTGCTGTAGGCAAGTTCCATGGGACTGCACAAAAGAGGCAGGACATAGGAGCTGGATaGCAGACATACTTTTATTCT +
Preference number: 4 (lower is better)
Translates to: NLRPLAVGKFHGTAQKRQDIGAG*QTYFYS
Trigger: AGAATAAAAGTATGTCTGTCATCCAGCTCCTATGTC...CTGCCTCTTTTGTGCAGTCCCATGGAACTTGCCTACAGCAAGAGGCCTAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR GCA 90 bp TGTGCAATCTGCTTGATGTCAGAGTGCTCTGGGATTTCCAACAGCTCTATCTGCTTGCTTTCCTATGGATaGTTCCTGCCCAGATTTTCT +
Preference number: 4 (lower is better)
Translates to: CAICLMSECSGISNSSICLLSYG*FLPRFS
Trigger: AGAAAATCTGGGCAGGAAGCATCCATAGGAAAGCAA...GCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGACATCAAGCAGATTGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR GCA 90 bp TGGCTGTGCAATCTGCTTGATGTCAGAGTGCTCTGGGATTTCCAACAGCTCTATTTGCTTTCCTATGGATaGTTCCTGCCCAGATTTTCT +
Preference number: 4 (lower is better)
Translates to: WLCNLLDVRVLWDFQQLYLLSYG*FLPRFS
Trigger: AGAAAATCTGGGCAGGAAGCATCCATAGGAAAGCAA...ATAGAGCTGTTGGAAATCCCAGAGCACTCTGACATCAAGCAGATTGCACAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR GCA 90 bp TGGATTTCCAACATTTGCCAGAGCTATAAACCGGGTGGCATGCTGTGCATTTTCACAGGGGCAAGAATTTaGTTTCCTATGGATGCTTCC +
Preference number: 4 (lower is better)
Translates to: WISNICQSYKPGGMLCIFTGARI*FPMDAS
Trigger: GGAAGCATCCATAGGAAAGCAAATTCTTGCCCCTGT...GAAAATGCACAGCATGCCACCCGGTTTATAGCTCTGGCAAATGTTGGAAATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR GCA 90 bp TGTGCAATCTGCTTGATGTCAGAGTGCTCTGGGATTTCCAACAGCTCTATCTGCGATGAGGAGAAGATTTaGTATCTCTACCTGTGGATG +
Preference number: 4 (lower is better)
Translates to: CAICLMSECSGISNSSICDEEKI*YLYLWM
Trigger: CATCCACAGGTAGAGATAGCAAATCTTCTCCTCATC...GCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGACATCAAGCAGATTGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CCA 90 bp TGTGCAATCTGCTTGATGTCAGAGTGCTCTGGGATTTCCAACAGCTCTATCTGCTCCCATTCAGCATCTTaGGTGGAGCCAAAGAAATTT +
Preference number: 4 (lower is better)
Translates to: CAICLMSECSGISNSSICSHSAS*VEPKKF
Trigger: AAATTTCTTTGGCTCCACCCAAGATGCTGAATGGGA...GCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGACATCAAGCAGATTGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CCA 90 bp CCATTTCCCTCGACTCTTAAAGAACCGTCTCAGAGTGGCCTTATACTTCTCCACTCCCATTCAGCATCTTaGGTGGAGCCAAAGAAATTT +
Preference number: 4 (lower is better)
Translates to: PFPSTLKEPSQSGLILLHSHSAS*VEPKKF
Trigger: AAATTTCTTTGGCTCCACCCAAGATGCTGAATGGGA...GTGGAGAAGTATAAGGCCACTCTGAGACGGTTCTTTAAGAGTCGAGGGAAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CCA 90 bp GAAGGCATCTTTAATGTCATCAGTAGTAGAGCAGCTGATTGGGACAGGAATGACTTGGTTTCAAGCCCGTaGCAAGACTGGAAACCAAAG +
Preference number: 4 (lower is better)
Translates to: EGIFNVISSRAADWDRNDLVSSP*QDWKPK
Trigger: CTTTGGTTTCCAGTCTTGCCACGGGCTTGAAACCAA...GTCATTCCTGTCCCAATCAGCTGCTCTACTACTGATGACATTAAAGATGCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CCA 90 bp TGGCTGTGCAATCTGCTTGATGTCAGAGTGCTCTGGGATTTCCAACAGCTCTATTCCAAAGCAGCAAAATaGTATCTTGGTTTCAAGCCC +
Preference number: 4 (lower is better)
Translates to: WLCNLLDVRVLWDFQQLYSKAAK*YLGFKP
Trigger: GGGCTTGAAACCAAGATACCATTTTGCTGCTTTGGA...ATAGAGCTGTTGGAAATCCCAGAGCACTCTGACATCAAGCAGATTGCACAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CCA 90 bp TCCTATGGATGCTTCCTGCCCAGATTTTCTGTAAGGGTTTTCAGTGACATCCGGTCCAAAGCAGCAAAATaGTATCTTGGTTTCAAGCCC +
Preference number: 4 (lower is better)
Translates to: SYGCFLPRFSVRVFSDIRSKAAK*YLGFKP
Trigger: GGGCTTGAAACCAAGATACCATTTTGCTGCTTTGGA...CCGGATGTCACTGAAAACCCTTACAGAAAATCTGGGCAGGAAGCATCCATAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CCA 90 bp TGGATTTCCAACATTTGCCAGAGCTATAAACCGGGTGGCATGCTGTGCATTTTCTTTGCGAGGCTGCTTTaGATGAGGAGAAGATTTGCT +
Preference number: 4 (lower is better)
Translates to: WISNICQSYKPGGMLCIFFARLL*MRRRFA
Trigger: AGCAAATCTTCTCCTCATCCAAAGCAGCCTCGCAAA...GAAAATGCACAGCATGCCACCCGGTTTATAGCTCTGGCAAATGTTGGAAATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CCA 90 bp TGGATTTCCAACATTTGCCAGAGCTATAAACCGGGTGGCATGCTGTGCATTTTCGATGTCAGAGTGCTCTaGGATTTCCAACAGCTCTAT +
Preference number: 4 (lower is better)
Translates to: WISNICQSYKPGGMLCIFDVRVL*DFQQLY
Trigger: ATAGAGCTGTTGGAAATCCCAGAGCACTCTGACATC...GAAAATGCACAGCATGCCACCCGGTTTATAGCTCTGGCAAATGTTGGAAATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CCA 90 bp TGGATTTCCAACATTTGCCAGAGCTATAAACCGGGTGGCATGCTGTGCATTTTCAGCTGTACTTGGAGCTaGATAACAGACATAGGAGCT +
Preference number: 4 (lower is better)
Translates to: WISNICQSYKPGGMLCIFSCTWS*ITDIGA
Trigger: AGCTCCTATGTCTGTTATCCAGCTCCAAGTACAGCT...GAAAATGCACAGCATGCCACCCGGTTTATAGCTCTGGCAAATGTTGGAAATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR TCA 90 bp AATCTTAGGCCTCTTGCTGTAGGCAAGTTCCATGGGACTGCACAAAAGAGGCAGTCATGGGAACAATACTaGACGCGTAAAGATACTTTT +
Preference number: 4 (lower is better)
Translates to: NLRPLAVGKFHGTAQKRQSWEQY*TRKDTF
Trigger: AAAAGTATCTTTACGCGTTCAGTATTGTTCCCATGA...CTGCCTCTTTTGTGCAGTCCCATGGAACTTGCCTACAGCAAGAGGCCTAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR TCA 90 bp TTAAATCAAAGAAAAACTGACAGGCTGATTCTTCCACAGGGGCAAGAATTTGCTTCTTCCTTGCTGATCTaGCACTGCCTCCAGTCAGAC +
Preference number: 4 (lower is better)
Translates to: LNQRKTDRLILPQGQEFASSLLI*HCLQSD
Trigger: GTCTGACTGGAGGCAGTGTCAGATCAGCAAGGAAGA...AGCAAATTCTTGCCCCTGTGGAAGAATCAGCCTGTCAGTTTTTCTTTGATTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR TCA 90 bp CCATTTCCCTCGACTCTTAAAGAACCGTCTCAGAGTGGCCTTATACTTCTCCACGACATAGGAGCTGGATaGCAGACATACTTTTATTCT +
Preference number: 4 (lower is better)
Translates to: PFPSTLKEPSQSGLILLHDIGAG*QTYFYS
Trigger: AGAATAAAAGTATGTCTGTCATCCAGCTCCTATGTC...GTGGAGAAGTATAAGGCCACTCTGAGACGGTTCTTTAAGAGTCGAGGGAAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CCA 90 bp GTTCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCCATGGGAGATTGTATATTTTACTGTTTCCTaGTTATTAGCACCAAGCACA +
Preference number: 4 (lower is better)
Translates to: VPWDCTKEAGKQSPWEIVYFTVS*LLAPST
Trigger: TGTGCTTGGTGCTAATAACCAGGAAACAGTAAAATA...TACAATCTCCCATGGGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR CCA 90 bp CAGGCTGATTCTTCCACAGGGGCAAGAATTTGCTTTCCTATGGATGCTTCCTGCGATATGGTTTCGATATaGAAGCCTCTCATAATAGGT +
Preference number: 4 (lower is better)
Translates to: QADSSTGARICFPMDASCDMVSI*KPLIIG
Trigger: ACCTATTATGAGAGGCTTCCATATCGAAACCATATC...GCAGGAAGCATCCATAGGAAAGCAAATTCTTGCCCCTGTGGAAGAATCAGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CCA 90 bp TTTGCCAGAGCTATAAACCGGGTGGCATGCTGTGCATTTTCCTGTAGAATGATAGATGTCAGAGTGCTCTaGGATTTCCAACAGCTCTAT +
Preference number: 4 (lower is better)
Translates to: FARAINRVACCAFSCRMIDVRVL*DFQQLY
Trigger: ATAGAGCTGTTGGAAATCCCAGAGCACTCTGACATC...TATCATTCTACAGGAAAATGCACAGCATGCCACCCGGTTTATAGCTCTGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CCA 90 bp CGGGTGGCATGCTGTGCATTTTCCTGTAGAATGATATGGTTTCGATATGGAAGCGGGAAACAGTCCCCATaGGAGATTGTAGTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: RVACCAFSCRMIWFRYGSGKQSP*EIVVSL
Trigger: TAAAGAAACTACAATCTCCCATGGGGACTGTTTCCC...GCTTCCATATCGAAACCATATCATTCTACAGGAAAATGCACAGCATGCCACCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468709.5
CDS-3UTR CCA 90 bp TTTGCCAGAGCTATAAACCGGGTGGCATGCTGTGCATTTTCCTGTAGAATGATAAGCTGTACTTGGAGCTaGATAACAGACATAGGAGCT +
Preference number: 4 (lower is better)
Translates to: FARAINRVACCAFSCRMISCTWS*ITDIGA
Trigger: AGCTCCTATGTCTGTTATCCAGCTCCAAGTACAGCT...TATCATTCTACAGGAAAATGCACAGCATGCCACCCGGTTTATAGCTCTGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR TCA 90 bp TTTGAAAATGTTGATATACACAAGCTGTACTTGGAGCTGGATAACAGACATAGGTCTTCCTTGCTGATCTaGCACTGCCTCCAGTCAGAC +
Preference number: 4 (lower is better)
Translates to: FENVDIHKLYLELDNRHRSSLLI*HCLQSD
Trigger: GTCTGACTGGAGGCAGTGTCAGATCAGCAAGGAAGA...CCTATGTCTGTTATCCAGCTCCAAGTACAGCTTGTGTATATCAACATTTTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354105.10
ENST00000468709.5
ENST00000482452.5
CDS-3UTR TCA 90 bp TCCTTCCCTGCTTTTCATTTAAATCAAAGAAAAACTGACAGGCTGATTCTTCCATCTTCCTTGCTGATCTaGCACTGCCTCCAGTCAGAC +
Preference number: 4 (lower is better)
Translates to: SFPAFHLNQRKTDRLILPSSLLI*HCLQSD
Trigger: GTCTGACTGGAGGCAGTGTCAGATCAGCAAGGAAGA...TGGAAGAATCAGCCTGTCAGTTTTTCTTTGATTTAAATGAAAAGCAGGGAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR TCA 90 bp ATTTCCAACATTTGCCAGAGCTATAAACCGGGTGGCATGCTGTGCATTTTCCTGGACATAGGAGCTGGATaGCAGACATACTTTTATTCT +
Preference number: 4 (lower is better)
Translates to: ISNICQSYKPGGMLCIFLDIGAG*QTYFYS
Trigger: AGAATAAAAGTATGTCTGTCATCCAGCTCCTATGTC...CAGGAAAATGCACAGCATGCCACCCGGTTTATAGCTCTGGCAAATGTTGGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR GCA 90 bp TTAAATCAAAGAAAAACTGACAGGCTGATTCTTCCACAGGGGCAAGAATTTGCTTATCTGCTGCTCCTGTaGCTGGGTAATGAAGGCATC +
Preference number: 4 (lower is better)
Translates to: LNQRKTDRLILPQGQEFAYLLLL*LGNEGI
Trigger: GATGCCTTCATTACCCAGGCACAGGAGCAGCAGATA...AGCAAATTCTTGCCCCTGTGGAAGAATCAGCCTGTCAGTTTTTCTTTGATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CCA 90 bp TGGATTTCCAACATTTGCCAGAGCTATAAACCGGGTGGCATGCTGTGCATTTTCATTCAGCATCTTGGGTaGAGCCAAAGAAATTTCCTA +
Preference number: 4 (lower is better)
Translates to: WISNICQSYKPGGMLCIFIQHLG*SQRNFL
Trigger: TAGGAAATTTCTTTGGCTCCACCCAAGATGCTGAAT...GAAAATGCACAGCATGCCACCCGGTTTATAGCTCTGGCAAATGTTGGAAATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482452.5
CDS-3UTR CCA 90 bp TTTGAAAATGTTGATATACACAAGCTGTACTTGGAGCTGGATAACAGACATAGGAGCCCGTGGCAAGACTaGAAACCAAAGCAGAACCAC +
Preference number: 4 (lower is better)
Translates to: FENVDIHKLYLELDNRHRSPWQD*KPKQNH
Trigger: GTGGTTCTGCTTTGGTTTCCAGTCTTGCCACGGGCT...CCTATGTCTGTTATCCAGCTCCAAGTACAGCTTGTGTATATCAACATTTTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354105.10
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CCA 90 bp CGGGTGGCATGCTGTGCATTTTCCTGTAGAATGATATGGTTTCGATATGGAAGCTCCTGTAGAATGATATaGTTTCGATATGGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: RVACCAFSCRMIWFRYGSSCRMI*FRYGSL
Trigger: GAGGCTTCCATATCGAAACCATATCATTCTACAGGA...GCTTCCATATCGAAACCATATCATTCTACAGGAAAATGCACAGCATGCCACCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
3UTR CAA 72 bp CATAATAGGTCTTTTCCAAAGCAGCAAAATGGTATCTaGGTTTCAAGCCCGTGGCAAGACTGGAAACCAAAG +
Preference number: 4 (lower is better)
Translates to: HNRSFPKQQNGI*VSSPWQDWKPK
Trigger: CTTTGGTTTCCAGTCTTGCCACGGGCTTGAAACCAAGATACCATTTTGCTGCTTTGGAAAAGACCTATTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468709.5
CDS-3UTR TCA 90 bp CCTGCTTTTCATTTAAATCAAAGAAAAACTGACAGGCTGATTCTTCCACAGGGGCACTTCTCCCTTTCTTaGTGCCAGTCTTATACTCCT +
Preference number: 4 (lower is better)
Translates to: PAFHLNQRKTDRLILPQGHFSLS*CQSYTP
Trigger: AGGAGTATAAGACTGGCATCAAGAAAGGGAGAAGTG...CCCCTGTGGAAGAATCAGCCTGTCAGTTTTTCTTTGATTTAAATGAAAAGCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000482452.5
CDS-3UTR GCA 90 bp TCCTTCCCTGCTTTTCATTTAAATCAAAGAAAAACTGACAGGCTGATTCTTCCAAACAGCTCTATCTGCTaGTCCTGTGCCTGGGTAATG +
Preference number: 4 (lower is better)
Translates to: SFPAFHLNQRKTDRLILPNSSIC*SCAWVM
Trigger: CATTACCCAGGCACAGGAGCAGCAGATAGAGCTGTT...TGGAAGAATCAGCCTGTCAGTTTTTCTTTGATTTAAATGAAAAGCAGGGAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR GCA 90 bp TTAAATCAAAGAAAAACTGACAGGCTGATTCTTCCACAGGGGCAAGAATTTGCTTGCTTGATGTCAGAGTaGTCTGGGATTTCCAACAGC +
Preference number: 4 (lower is better)
Translates to: LNQRKTDRLILPQGQEFACLMSE*SGISNS
Trigger: GCTGTTGGAAATCCCAGAGCACTCTGACATCAAGCA...AGCAAATTCTTGCCCCTGTGGAAGAATCAGCCTGTCAGTTTTTCTTTGATTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR GCA 90 bp TTTGAAAATGTTGATATACACAAGCTGTACTTGGAGCTGGATAACAGACATAGGTGCTGCTCCTGGCTGTaGAATCTGCTTGATGTCAGA +
Preference number: 4 (lower is better)
Translates to: FENVDIHKLYLELDNRHRCCSWL*NLLDVR
Trigger: TCTGACATCAAGCAGATTGCACAGCCAGGAGCAGCA...CCTATGTCTGTTATCCAGCTCCAAGTACAGCTTGTGTATATCAACATTTTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354105.10
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CCA 90 bp TCCTATGGATGCTTCCTGCCCAGATTTTCTGTAAGGGTTTTCAGTGACATCCGGTATTTTACTGTTTCCTaGTTATTAGCACCAAGCACA +
Preference number: 4 (lower is better)
Translates to: SYGCFLPRFSVRVFSDIRYFTVS*LLAPST
Trigger: TGTGCTTGGTGCTAATAACCAGGAAACAGTAAAATA...CCGGATGTCACTGAAAACCCTTACAGAAAATCTGGGCAGGAAGCATCCATAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000468709.5
CDS-3UTR CCA 90 bp TTTGAAAATGTTGATATACACAAGCTGTACTTGGAGCTGGATAACAGACATAGGCACACACTTGGGCCATaGGGATGTGAGCAAGATATC +
Preference number: 4 (lower is better)
Translates to: FENVDIHKLYLELDNRHRHTLGP*GCEQDI
Trigger: GATATCTTGCTCACATCCCCATGGCCCAAGTGTGTG...CCTATGTCTGTTATCCAGCTCCAAGTACAGCTTGTGTATATCAACATTTTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354105.10
CDS-3UTR CCA 90 bp TTTGAAAATGTTGATATACACAAGCTGTACTTGGAGCTGGATAACAGACATAGGCAGATAAGCCTCCTTTaGCCAGGGCAAGGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: FENVDIHKLYLELDNRHRQISLL*PGQGSN
Trigger: ATTGCTACCTTGCCCTGGCCAAAGGAGGCTTATCTG...CCTATGTCTGTTATCCAGCTCCAAGTACAGCTTGTGTATATCAACATTTTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354105.10
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CCA 90 bp TTAAATCAAAGAAAAACTGACAGGCTGATTCTTCCACAGGGGCAAGAATTTGCTTCATGCAATCCTGCTTaGGTGACAGAGCGAGACTTT +
Preference number: 4 (lower is better)
Translates to: LNQRKTDRLILPQGQEFASCNPA*VTERDF
Trigger: AAAGTCTCGCTCTGTCACCCAAGCAGGATTGCATGA...AGCAAATTCTTGCCCCTGTGGAAGAATCAGCCTGTCAGTTTTTCTTTGATTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482452.5
CDS-3UTR GCA 90 bp TTTGAAAATGTTGATATACACAAGCTGTACTTGGAGCTGGATAACAGACATAGGCAAGTTCCATGGGACTaGACAAAAGAGGCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: FENVDIHKLYLELDNRHRQVPWD*TKEAGK
Trigger: TTTCCCTGCCTCTTTTGTGCAGTCCCATGGAACTTG...CCTATGTCTGTTATCCAGCTCCAAGTACAGCTTGTGTATATCAACATTTTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR CCA 90 bp TTTGAAAATGTTGATATACACAAGCTGTACTTGGAGCTGGATAACAGACATAGGTGCTATCTCTACCTGTaGATGAACGCTTCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: FENVDIHKLYLELDNRHRCYLYL*MNASFP
Trigger: AGGGAAGGAAGCGTTCATCCACAGGTAGAGATAGCA...CCTATGTCTGTTATCCAGCTCCAAGTACAGCTTGTGTATATCAACATTTTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354105.10
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CCA 90 bp TTAAATCAAAGAAAAACTGACAGGCTGATTCTTCCACAGGGGCAAGAATTTGCTTTTGCGAGGCTGCTTTaGATGAGGAGAAGATTTGCT +
Preference number: 4 (lower is better)
Translates to: LNQRKTDRLILPQGQEFAFARLL*MRRRFA
Trigger: AGCAAATCTTCTCCTCATCCAAAGCAGCCTCGCAAA...AGCAAATTCTTGCCCCTGTGGAAGAATCAGCCTGTCAGTTTTTCTTTGATTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR TCA 90 bp TTTGAAAATGTTGATATACACAAGCTGTACTTGGAGCTGGATAACAGACATAGGCCAAGCACATATGTCTaGATAGGAGCTTTCTTGATG +
Preference number: 4 (lower is better)
Translates to: FENVDIHKLYLELDNRHRPSTYV*IGAFLM
Trigger: CATCAAGAAAGCTCCTATTCAGACATATGTGCTTGG...CCTATGTCTGTTATCCAGCTCCAAGTACAGCTTGTGTATATCAACATTTTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR GCA 90 bp TTTGAAAATGTTGATATACACAAGCTGTACTTGGAGCTGGATAACAGACATAGGTGGATTTCCAACATTTaGCAGAGCTATAAACCGGGT +
Preference number: 4 (lower is better)
Translates to: FENVDIHKLYLELDNRHRWISNI*QSYKPG
Trigger: ACCCGGTTTATAGCTCTGGCAAATGTTGGAAATCCA...CCTATGTCTGTTATCCAGCTCCAAGTACAGCTTGTGTATATCAACATTTTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354105.10
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CCA 90 bp TTTGAAAATGTTGATATACACAAGCTGTACTTGGAGCTGGATAACAGACATAGGTCCTGTAGAATGATATaGTTTCGATATGGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: FENVDIHKLYLELDNRHRSCRMI*FRYGSL
Trigger: GAGGCTTCCATATCGAAACCATATCATTCTACAGGA...CCTATGTCTGTTATCCAGCTCCAAGTACAGCTTGTGTATATCAACATTTTCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354105.10
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CCA 90 bp TTTGAAAATGTTGATATACACAAGCTGTACTTGGAGCTGGATAACAGACATAGGTACACAAGCTGTACTTaGAGCTGGATAACAGACATA +
Preference number: 4 (lower is better)
Translates to: FENVDIHKLYLELDNRHRYTSCT*SWITDI
Trigger: TATGTCTGTTATCCAGCTCCAAGTACAGCTTGTGTA...CCTATGTCTGTTATCCAGCTCCAAGTACAGCTTGTGTATATCAACATTTTCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354105.10
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CCA 90 bp TTTGAAAATGTTGATATACACAAGCTGTACTTGGAGCTGGATAACAGACATAGGGATATGGTTTCGATATaGAAGCCTCTCATAATAGGT +
Preference number: 4 (lower is better)
Translates to: FENVDIHKLYLELDNRHRDMVSI*KPLIIG
Trigger: ACCTATTATGAGAGGCTTCCATATCGAAACCATATC...CCTATGTCTGTTATCCAGCTCCAAGTACAGCTTGTGTATATCAACATTTTCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354105.10
ENST00000468709.5
ENST00000482452.5
CDS GCA 90 bp AAGAGGCGCAGCGGTTTCTGTGCCATCTGTCCGAATAGTATGGGTTaGGACTGCCACCTAAAATTGGGAATGCGAATCCGCGCTCCCCGG +
Preference number: 5 (lower is better)
Translates to: KRRSGFCAICPNSMG*DCHLKLGMRIRAPR
Trigger: CCGGGGAGCGCGGATTCGCATTCCCAATTTTAGGTGGCAGTCGCAACCCATACTATTCGGACAGATGGCACAGAAACCGCTGCGCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000473842.1
CDS-3UTR CAA 90 bp TGTCAGAGTGCTCTGGGATTTCCAACAGCTCTATCTGCTGCTCCTGTGCCTGGGGGCTGTGCAATCTGCTaGATGTCAGAGTGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: CQSALGFPTALSAAPVPGGCAIC*MSECSG
Trigger: CCCAGAGCACTCTGACATCAAGCAGATTGCACAGCC...CCCAGGCACAGGAGCAGCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CAA 90 bp TCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCCATGGGAGATTGTAGTAAGTTCCCCACACACTaGGGCCATGGGGATGTGAGC +
Preference number: 5 (lower is better)
Translates to: SMGLHKRGRETVPMGDCSKFPTH*GHGDVS
Trigger: GCTCACATCCCCATGGCCCAAGTGTGTGGGGAACTT...ACTACAATCTCCCATGGGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000354105.10
CDS-3UTR CAA 90 bp GTCATAGGGCTCAAAGTCTTTCCGGAAGCGGCGAGCCAGGGTCTCCTCGTCTTCCAATGTGTGCCGATGTaGACCACCAAATGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: VIGLKVFPEAASQGLLVFQCVPM*TTKCFS
Trigger: GGAAAAACATTTGGTGGTCAACATCGGCACACATTG...GAAGACGAGGAGACCCTGGCTCGCCGCTTCCGGAAAGACTTTGAGCCCTATGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CAA 90 bp TGGGATTTCCAACAGCTCTATCTGCTGCTCCTGTGCCTGGGTAATGAAGGCATCGGCTGTGCAATCTGCTaGATGTCAGAGTGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: WDFQQLYLLLLCLGNEGIGCAIC*MSECSG
Trigger: CCCAGAGCACTCTGACATCAAGCAGATTGCACAGCC...GATGCCTTCATTACCCAGGCACAGGAGCAGCAGATAGAGCTGTTGGAAATCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS GCA 90 bp GGTACTGGCTCATTTAAGGATTCTGTCCCACTGAGGTACACAATCTaGAGCCCCGAGCTTCCAGTGAAGATACCTTTACGACAGGCGCAG +
Preference number: 5 (lower is better)
Translates to: GTGSFKDSVPLRYTI*SPELPVKIPLRQAQ
Trigger: CTGCGCCTGTCGTAAAGGTATCTTCACTGGAAGCTCGGGGCTGCAGATTGTGTACCTCAGTGGGACAGAATCCTTAAATGAGCCAGTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496796.5
CDS-3UTR CAA 90 bp GTTCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCCATGGGAGATTGTAAAGGCAGAGGATCCCTaGAGCCTAGGCATTACAGAC +
Preference number: 5 (lower is better)
Translates to: VPWDCTKEAGKQSPWEIVKAEDP*SLGITD
Trigger: GTCTGTAATGCCTAGGCTCAAGGGATCCTCTGCCTT...TACAATCTCCCATGGGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR CAA 90 bp TGTCAGAGTGCTCTGGGATTTCCAACAGCTCTATCTGCTGCTCCTGTGCCTGGGCCACTTCTCCCTTTCTaGATGCCAGTCTTATACTCC +
Preference number: 5 (lower is better)
Translates to: CQSALGFPTALSAAPVPGPLLPF*MPVLYS
Trigger: GGAGTATAAGACTGGCATCAAGAAAGGGAGAAGTGG...CCCAGGCACAGGAGCAGCAGATAGAGCTGTTGGAAATCCCAGAGCACTCTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482452.5
CDS-3UTR CAA 90 bp AAGTTCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCCATGGGAGATTGGTTTGCGAGGCTGCTTaGGATGAGGAGAAGATTTGC +
Preference number: 5 (lower is better)
Translates to: KFHGTAQKRQGNSPHGRLVCEAA*DEEKIC
Trigger: GCAAATCTTCTCCTCATCCAAAGCAGCCTCGCAAAC...CAATCTCCCATGGGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR CAA 90 bp CACTGCCTCCAGTCAGACTTATCAGGAACATTAAGGATGGCTTCACTGGCCAGGGTTTGCGAGGCTGCTTaGGATGAGGAGAAGATTTGC +
Preference number: 5 (lower is better)
Translates to: HCLQSDLSGTLRMASLARVCEAA*DEEKIC
Trigger: GCAAATCTTCTCCTCATCCAAAGCAGCCTCGCAAAC...CCTGGCCAGTGAAGCCATCCTTAATGTTCCTGATAAGTCTGACTGGAGGCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CAA 90 bp AAGTTCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCCATGGGAGATTGCTCCCATTCAGCATCTaGGGTGGAGCCAAAGAAATT +
Preference number: 5 (lower is better)
Translates to: KFHGTAQKRQGNSPHGRLLPFSI*GGAKEI
Trigger: AATTTCTTTGGCTCCACCCAAGATGCTGAATGGGAG...CAATCTCCCATGGGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR CAA 90 bp TGGGATTTCCAACAGCTCTATCTGCTGCTCCTGTGCCTGGGTAATGAAGGCATCCTCCCATTCAGCATCTaGGGTGGAGCCAAAGAAATT +
Preference number: 5 (lower is better)
Translates to: WDFQQLYLLLLCLGNEGILPFSI*GGAKEI
Trigger: AATTTCTTTGGCTCCACCCAAGATGCTGAATGGGAG...GATGCCTTCATTACCCAGGCACAGGAGCAGCAGATAGAGCTGTTGGAAATCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CAA 90 bp CCTCCAGTCAGACTTATCAGGAACATTAAGGATGGCTTCACTGGCCAGGACCTCCAGCAAAATGGTATCTaGGTTTCAAGCCCGTGGCAA +
Preference number: 5 (lower is better)
Translates to: PPVRLIRNIKDGFTGQDLQQNGI*VSSPWQ
Trigger: TTGCCACGGGCTTGAAACCAAGATACCATTTTGCTG...GAGGTCCTGGCCAGTGAAGCCATCCTTAATGTTCCTGATAAGTCTGACTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CAA 90 bp GTTCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCCATGGGAGATTGTACACAGGGGCAAGAATTaGCTTTCCTATGGATGCTTC +
Preference number: 5 (lower is better)
Translates to: VPWDCTKEAGKQSPWEIVHRGKN*LSYGCF
Trigger: GAAGCATCCATAGGAAAGCAAATTCTTGCCCCTGTG...TACAATCTCCCATGGGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS-3UTR CAA 90 bp CCTCCAGTCAGACTTATCAGGAACATTAAGGATGGCTTCACTGGCCAGGACCTCCACAGGGGCAAGAATTaGCTTTCCTATGGATGCTTC +
Preference number: 5 (lower is better)
Translates to: PPVRLIRNIKDGFTGQDLHRGKN*LSYGCF
Trigger: GAAGCATCCATAGGAAAGCAAATTCTTGCCCCTGTG...GAGGTCCTGGCCAGTGAAGCCATCCTTAATGTTCCTGATAAGTCTGACTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CAA 90 bp TGGCTGTGCAATCTGCTTGATGTCAGAGTGCTCTGGGATTTCCAACAGCTCTATGACTGCCACCTAAAATaGGGAATGCGAATCCGCGCT +
Preference number: 5 (lower is better)
Translates to: WLCNLLDVRVLWDFQQLYDCHLK*GMRIRA
Trigger: AGCGCGGATTCGCATTCCCAATTTTAGGTGGCAGTC...ATAGAGCTGTTGGAAATCCCAGAGCACTCTGACATCAAGCAGATTGCACAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468709.5
CDS-3UTR CAA 90 bp CCTCCAGTCAGACTTATCAGGAACATTAAGGATGGCTTCACTGGCCAGGACCTCGCAGAACCACATTTTTaGGTATCCACTTCTCCCCAG +
Preference number: 5 (lower is better)
Translates to: PPVRLIRNIKDGFTGQDLAEPHF*VSTSPQ
Trigger: CTGGGGAGAAGTGGATACCAAAAAATGTGGTTCTGC...GAGGTCCTGGCCAGTGAAGCCATCCTTAATGTTCCTGATAAGTCTGACTGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468709.5
CDS GCA 90 bp GGTACTGGCTCATTTAAGGATTCTGTCCCACTGAGGTACACAATCTaGAGCCCCGAGCTTCCAGTGAAGATACCTTTACGACCTTTCTTG +
Preference number: 5 (lower is better)
Translates to: GTGSFKDSVPLRYTI*SPELPVKIPLRPFL
Trigger: CAAGAAAGGTCGTAAAGGTATCTTCACTGGAAGCTCGGGGCTGCAGATTGTGTACCTCAGTGGGACAGAATCCTTAAATGAGCCAGTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473842.1
CDS CCA 90 bp CACTTCTCCAGAAGAATTCCCAAAGTTCCCCACACACTTGGGCCATaGGGATGTGAGCAAGATATCAACACCCTTAAACTGGGAGGTTGT +
Preference number: 5 (lower is better)
Translates to: HFSRRIPKVPHTLGP*GCEQDINTLKLGGC
Trigger: ACAACCTCCCAGTTTAAGGGTGTTGATATCTTGCTCACATCCCCATGGCCCAAGTGTGTGGGGAACTTTGGGAATTCTTCTGGAGAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354105.10
ENST00000473842.1
ENST00000496796.5
CDS-3UTR CAA 90 bp AAGTTCCATGGGACTGCACAAAAGAGGCAGGGAAACAGTCCCCATGGGAGATTGCAATGTGTGCCGATGTaGACCACCAAATGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: KFHGTAQKRQGNSPHGRLQCVPM*TTKCFS
Trigger: GGAAAAACATTTGGTGGTCAACATCGGCACACATTG...CAATCTCCCATGGGGACTGTTTCCCTGCCTCTTTTGTGCAGTCCCATGGAACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000354105.10
ENST00000468709.5
CDS CCA 90 bp CACTTGGGCCATGGGGATGTGAGCAAGATATCAACACCCTTAAACTaGGAGGTTGTACACAGCATCATTCTCAGAGAAGACACATCCTTG +
Preference number: 5 (lower is better)
Translates to: HLGHGDVSKISTPLN*EVVHSIILREDTSL
Trigger: CAAGGATGTGTCTTCTCTGAGAATGATGCTGTGTACAACCTCCCAGTTTAAGGGTGTTGATATCTTGCTCACATCCCCATGGCCCAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354105.10
ENST00000473842.1
ENST00000496796.5
CDS-3UTR CAA 90 bp ATTTCCAACATTTGCCAGAGCTATAAACCGGGTGGCATGCTGTGCATTTTCCTGGTTTGCGAGGCTGCTTaGGATGAGGAGAAGATTTGC +
Preference number: 5 (lower is better)
Translates to: ISNICQSYKPGGMLCIFLVCEAA*DEEKIC
Trigger: GCAAATCTTCTCCTCATCCAAAGCAGCCTCGCAAAC...CAGGAAAATGCACAGCATGCCACCCGGTTTATAGCTCTGGCAAATGTTGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CAA 90 bp TGGATTTCCAACATTTGCCAGAGCTATAAACCGGGTGGCATGCTGTGCATTTTCCTCCCATTCAGCATCTaGGGTGGAGCCAAAGAAATT +
Preference number: 5 (lower is better)
Translates to: WISNICQSYKPGGMLCIFLPFSI*GGAKEI
Trigger: AATTTCTTTGGCTCCACCCAAGATGCTGAATGGGAG...GAAAATGCACAGCATGCCACCCGGTTTATAGCTCTGGCAAATGTTGGAAATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CAA 90 bp AATCTTAGGCCTCTTGCTGTAGGCAAGTTCCATGGGACTGCACAAAAGAGGCAGGCAGAACCACATTTTTaGGTATCCACTTCTCCAGAA +
Preference number: 5 (lower is better)
Translates to: NLRPLAVGKFHGTAQKRQAEPHF*VSTSPE
Trigger: TTCTGGAGAAGTGGATACCAAAAAATGTGGTTCTGC...CTGCCTCTTTTGTGCAGTCCCATGGAACTTGCCTACAGCAAGAGGCCTAAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354105.10
CDS-3UTR CAA 90 bp CAGGCTGATTCTTCCACAGGGGCAAGAATTTGCTTTCCTATGGATGCTTCCTGCATACACAAGCTGTACTaGGAGCTGGATAACAGACAT +
Preference number: 5 (lower is better)
Translates to: QADSSTGARICFPMDASCIHKLY*ELDNRH
Trigger: ATGTCTGTTATCCAGCTCCAAGTACAGCTTGTGTAT...GCAGGAAGCATCCATAGGAAAGCAAATTCTTGCCCCTGTGGAAGAATCAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS CCA 90 bp GGAGCTTTCTTGATGCCAGTCTTATACTCCTCCCATTCAGCATCTTaGGTGGAGCCAAAGAAATTTCCTACACACAACAGCAGATCAAAG +
Preference number: 5 (lower is better)
Translates to: GAFLMPVLYSSHSAS*VEPKKFPTHNSRSK
Trigger: CTTTGATCTGCTGTTGTGTGTAGGAAATTTCTTTGGCTCCACCCAAGATGCTGAATGGGAGGAGTATAAGACTGGCATCAAGAAAGCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354105.10
CDS CCA 90 bp CTCCCTTTCTTGATGCCAGTCTTATACTCCTCCCATTCAGCATCTTaGGTGGAGCCAAAGAAATTTCCTACACACAACAGCAGATCAAAG +
Preference number: 5 (lower is better)
Translates to: LPFLMPVLYSSHSAS*VEPKKFPTHNSRSK
Trigger: CTTTGATCTGCTGTTGTGTGTAGGAAATTTCTTTGGCTCCACCCAAGATGCTGAATGGGAGGAGTATAAGACTGGCATCAAGAAAGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482452.5
CDS CCA 90 bp CGACCTTTCTTGATGCCAGTCTTATACTCCTCCCATTCAGCATCTTaGGTGGAGCCAAAGAAATTTCCTACACACAACAGCAGATCAAAG +
Preference number: 5 (lower is better)
Translates to: RPFLMPVLYSSHSAS*VEPKKFPTHNSRSK
Trigger: CTTTGATCTGCTGTTGTGTGTAGGAAATTTCTTTGGCTCCACCCAAGATGCTGAATGGGAGGAGTATAAGACTGGCATCAAGAAAGGTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473842.1
CDS-3UTR CAA 90 bp GAAGGCATCTTTAATGTCATCAGTAGTAGAGCAGCTGATTGGGACAGGAATGACCACAGGGGCAAGAATTaGCTTTCCTATGGATGCTTC +
Preference number: 5 (lower is better)
Translates to: EGIFNVISSRAADWDRNDHRGKN*LSYGCF
Trigger: GAAGCATCCATAGGAAAGCAAATTCTTGCCCCTGTG...GTCATTCCTGTCCCAATCAGCTGCTCTACTACTGATGACATTAAAGATGCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CAA 90 bp TTTGAAAATGTTGATATACACAAGCTGTACTTGGAGCTGGATAACAGACATAGGGGCTGTGCAATCTGCTaGATGTCAGAGTGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: FENVDIHKLYLELDNRHRGCAIC*MSECSG
Trigger: CCCAGAGCACTCTGACATCAAGCAGATTGCACAGCC...CCTATGTCTGTTATCCAGCTCCAAGTACAGCTTGTGTATATCAACATTTTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354105.10
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CAA 90 bp TTAAATCAAAGAAAAACTGACAGGCTGATTCTTCCACAGGGGCAAGAATTTGCTAAGGCAGAGGATCCCTaGAGCCTAGGCATTACAGAC +
Preference number: 5 (lower is better)
Translates to: LNQRKTDRLILPQGQEFAKAEDP*SLGITD
Trigger: GTCTGTAATGCCTAGGCTCAAGGGATCCTCTGCCTT...AGCAAATTCTTGCCCCTGTGGAAGAATCAGCCTGTCAGTTTTTCTTTGATTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468709.5
CDS-3UTR CAA 90 bp GAAGGCATCTTTAATGTCATCAGTAGTAGAGCAGCTGATTGGGACAGGAATGACGCAGAACCACATTTTTaGGTATCCACTTCTCCCTTT +
Preference number: 5 (lower is better)
Translates to: EGIFNVISSRAADWDRNDAEPHF*VSTSPF
Trigger: AAAGGGAGAAGTGGATACCAAAAAATGTGGTTCTGC...GTCATTCCTGTCCCAATCAGCTGCTCTACTACTGATGACATTAAAGATGCCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482452.5
CDS-3UTR CAA 90 bp TCCTTCCCTGCTTTTCATTTAAATCAAAGAAAAACTGACAGGCTGATTCTTCCACTCATGCAATCCTGCTaGGGTGACAGAGCGAGACTT +
Preference number: 5 (lower is better)
Translates to: SFPAFHLNQRKTDRLILPLMQSC*GDRARL
Trigger: AAGTCTCGCTCTGTCACCCAAGCAGGATTGCATGAG...TGGAAGAATCAGCCTGTCAGTTTTTCTTTGATTTAAATGAAAAGCAGGGAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482452.5
CDS-3UTR CAA 90 bp CCTGCTTTTCATTTAAATCAAAGAAAAACTGACAGGCTGATTCTTCCACAGGGGCAATGTGTGCCGATGTaGACCACCAAATGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: PAFHLNQRKTDRLILPQGQCVPM*TTKCFS
Trigger: GGAAAAACATTTGGTGGTCAACATCGGCACACATTG...CCCCTGTGGAAGAATCAGCCTGTCAGTTTTTCTTTGATTTAAATGAAAAGCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000482452.5
CDS-3UTR CAA 90 bp TTTGAAAATGTTGATATACACAAGCTGTACTTGGAGCTGGATAACAGACATAGGCAGCAAAATGGTATCTaGGTTTCAAGCCCGTGGCAA +
Preference number: 5 (lower is better)
Translates to: FENVDIHKLYLELDNRHRQQNGI*VSSPWQ
Trigger: TTGCCACGGGCTTGAAACCAAGATACCATTTTGCTG...CCTATGTCTGTTATCCAGCTCCAAGTACAGCTTGTGTATATCAACATTTTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354105.10
ENST00000468709.5
ENST00000482452.5
CDS GCA 90 bp ATAGAGTATTCAAGGACTTCATCACCAGCATATAATCCTTTATTTTaGTTCAGTCAAGGAAGTGGCAGTTTGAGGAAGGGCATAACCACA +
Preference number: 5 (lower is better)
Translates to: IEYSRTSSPAYNPLF*FSQGSGSLRKGITT
Trigger: TGTGGTTATGCCCTTCCTCAAACTGCCACTTCCTTGACTGAAGCAAAATAAAGGATTATATGCTGGTGATGAAGTCCTTGAATACTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478047.1
CDS-3UTR CAA 90 bp TTTGAAAATGTTGATATACACAAGCTGTACTTGGAGCTGGATAACAGACATAGGATACACAAGCTGTACTaGGAGCTGGATAACAGACAT +
Preference number: 5 (lower is better)
Translates to: FENVDIHKLYLELDNRHRIHKLY*ELDNRH
Trigger: ATGTCTGTTATCCAGCTCCAAGTACAGCTTGTGTAT...CCTATGTCTGTTATCCAGCTCCAAGTACAGCTTGTGTATATCAACATTTTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354105.10
ENST00000468709.5
ENST00000482452.5
CDS GCA 72 bp TTCTGTGCCATCTGTCCGAATAGTATGGGTTGCGACTaGCACCTAAAATTGGGAATGCGAATCCGCGCTCCC +
Preference number: 6 (lower is better)
Translates to: FCAICPNSMGCD*HLKLGMRIRAP
Trigger: GGGAGCGCGGATTCGCATTCCCAATTTTAGGTGGCAGTCGCAACCCATACTATTCGGACAGATGGCACAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000473842.1
CDS GCA 72 bp AGCGGTTTCTGTGCCATCTGTCCGAATAGTATGGGTTaGGACTGCCACCTAAAATTGGGAATGCGAATCCGC +
Preference number: 6 (lower is better)
Translates to: SGFCAICPNSMG*DCHLKLGMRIR
Trigger: GCGGATTCGCATTCCCAATTTTAGGTGGCAGTCGCAACCCATACTATTCGGACAGATGGCACAGAAACCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468709.5
ENST00000473842.1
CDS CAA 72 bp ACTTCTCCAGAAGAATTCCCAAAGTTCCCCACACACTaGGGCCATGGGGATGTGAGCAAGATATCAACACCC +
Preference number: 6 (lower is better)
Translates to: TSPEEFPKFPTH*GHGDVSKISTP
Trigger: GGGTGTTGATATCTTGCTCACATCCCCATGGCCCAAGTGTGTGGGGAACTTTGGGAATTCTTCTGGAGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354105.10
ENST00000473842.1
ENST00000496796.5
CDS CAA 72 bp GTGGCAAGACTGGAAACCAAAGCAGAACCACATTTTTaGGTATCCACTTCTCCAGGCGCAGCGGTTTCTGTG +
Preference number: 6 (lower is better)
Translates to: VARLETKAEPHF*VSTSPGAAVSV
Trigger: CACAGAAACCGCTGCGCCTGGAGAAGTGGATACCAAAAAATGTGGTTCTGCTTTGGTTTCCAGTCTTGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466955.5
CDS CAA 90 bp TTGGTATCCACTTCTCCAGAAGAATTCCCAAAGTTCCCCACACACTaGGGCCATGGGGATGTGAGCAAGATATCAACACCCTTAAACTGG +
Preference number: 6 (lower is better)
Translates to: LVSTSPEEFPKFPTH*GHGDVSKISTPLNW
Trigger: CCAGTTTAAGGGTGTTGATATCTTGCTCACATCCCCATGGCCCAAGTGTGTGGGGAACTTTGGGAATTCTTCTGGAGAAGTGGATACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354105.10
ENST00000473842.1
ENST00000496796.5
CDS GCA 72 bp TCATTTAAGGATTCTGTCCCACTGAGGTACACAATCTaGAGCCCCGAGCTTCCAGTGAAGATACCTTTACGA +
Preference number: 6 (lower is better)
Translates to: SFKDSVPLRYTI*SPELPVKIPLR
Trigger: TCGTAAAGGTATCTTCACTGGAAGCTCGGGGCTGCAGATTGTGTACCTCAGTGGGACAGAATCCTTAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354105.10
ENST00000473842.1
ENST00000496796.5
CDS CCA 72 bp TTGATGCCAGTCTTATACTCCTCCCATTCAGCATCTTaGGTGGAGCCAAAGAAATTTCCTACACACAACAGC +
Preference number: 6 (lower is better)
Translates to: LMPVLYSSHSAS*VEPKKFPTHNS
Trigger: GCTGTTGTGTGTAGGAAATTTCTTTGGCTCCACCCAAGATGCTGAATGGGAGGAGTATAAGACTGGCATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354105.10
ENST00000473842.1
ENST00000482452.5
CDS CAA 72 bp CTTGATGCCAGTCTTATACTCCTCCCATTCAGCATCTaGGGTGGAGCCAAAGAAATTTCCTACACACAACAG +
Preference number: 6 (lower is better)
Translates to: LDASLILLPFSI*GGAKEISYTQQ
Trigger: CTGTTGTGTGTAGGAAATTTCTTTGGCTCCACCCAAGATGCTGAATGGGAGGAGTATAAGACTGGCATCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354105.10
ENST00000473842.1
ENST00000482452.5
CDS CAA 90 bp AGGAGCTTTCTTGATGCCAGTCTTATACTCCTCCCATTCAGCATCTaGGGTGGAGCCAAAGAAATTTCCTACACACAACAGCAGATCAAA +
Preference number: 6 (lower is better)
Translates to: RSFLDASLILLPFSI*GGAKEISYTQQQIK
Trigger: TTTGATCTGCTGTTGTGTGTAGGAAATTTCTTTGGCTCCACCCAAGATGCTGAATGGGAGGAGTATAAGACTGGCATCAAGAAAGCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354105.10
CDS CAA 90 bp CGCGTAAAGATACTTTACAAAGGAGTCTCCGAAACTGCTGAGACCTaGCAGTCAGGGAGAAGAGAAGATCTGAATGCTAAACGATATGGA +
Preference number: 6 (lower is better)
Translates to: RVKILYKGVSETAET*QSGRREDLNAKRYG
Trigger: TCCATATCGTTTAGCATTCAGATCTTCTCTTCTCCCTGACTGCAAGGTCTCAGCAGTTTCGGAGACTCCTTTGTAAAGTATCTTTACGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466955.5
CDS CAA 90 bp TCTCCCTTTCTTGATGCCAGTCTTATACTCCTCCCATTCAGCATCTaGGGTGGAGCCAAAGAAATTTCCTACACACAACAGCAGATCAAA +
Preference number: 6 (lower is better)
Translates to: SPFLDASLILLPFSI*GGAKEISYTQQQIK
Trigger: TTTGATCTGCTGTTGTGTGTAGGAAATTTCTTTGGCTCCACCCAAGATGCTGAATGGGAGGAGTATAAGACTGGCATCAAGAAAGGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482452.5
CDS CAA 90 bp ACGACCTTTCTTGATGCCAGTCTTATACTCCTCCCATTCAGCATCTaGGGTGGAGCCAAAGAAATTTCCTACACACAACAGCAGATCAAA +
Preference number: 6 (lower is better)
Translates to: TTFLDASLILLPFSI*GGAKEISYTQQQIK
Trigger: TTTGATCTGCTGTTGTGTGTAGGAAATTTCTTTGGCTCCACCCAAGATGCTGAATGGGAGGAGTATAAGACTGGCATCAAGAAAGGTCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473842.1
CDS TCA 72 bp CGTAAAGATACTTTACAAAGGAGTCTCCGAAACTGCTaGGACCTTGCAGTCAGGGAGAAGAGAAGATCTGAA +
Preference number: 6 (lower is better)
Translates to: RKDTLQRSLRNC*DLAVREKRRSE
Trigger: TTCAGATCTTCTCTTCTCCCTGACTGCAAGGTCTCAGCAGTTTCGGAGACTCCTTTGTAAAGTATCTTTACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466955.5
CDS CAA 72 bp GTGGCAAGACTGGAAACCAAAGCAGAACCACATTTTTaGGTATCCACTTCTCCCTTTCTTGATGCCAGTCTT +
Preference number: 6 (lower is better)
Translates to: VARLETKAEPHF*VSTSPFLDASL
Trigger: AAGACTGGCATCAAGAAAGGGAGAAGTGGATACCAAAAAATGTGGTTCTGCTTTGGTTTCCAGTCTTGCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482452.5
CDS TCA 72 bp GTTCTGCTGCATCCATTAGCTTCATGGGAACAATACTaGACGCGTAAAGATACTTTACAAAGGAGTCTCCGA +
Preference number: 6 (lower is better)
Translates to: VLLHPLASWEQY*TRKDTLQRSLR
Trigger: TCGGAGACTCCTTTGTAAAGTATCTTTACGCGTTCAGTATTGTTCCCATGAAGCTAATGGATGCAGCAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466955.5
CDS CAA 72 bp AATCCTTTATTTTGCTTCAGTCAAGGAAGTGGCAGTTaGAGGAAGGGCATAACCACACCCTTCTTAAGTAAT +
Preference number: 6 (lower is better)
Translates to: NPLFCFSQGSGS*RKGITTPFLSN
Trigger: ATTACTTAAGAAGGGTGTGGTTATGCCCTTCCTCAAACTGCCACTTCCTTGACTGAAGCAAAATAAAGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478047.1
CDS CAA 90 bp CCAGCATATAATCCTTTATTTTGCTTCAGTCAAGGAAGTGGCAGTTaGAGGAAGGGCATAACCACACCCTTCTTAAGTAATATGAAGTTT +
Preference number: 6 (lower is better)
Translates to: PAYNPLFCFSQGSGS*RKGITTPFLSNMKF
Trigger: AAACTTCATATTACTTAAGAAGGGTGTGGTTATGCCCTTCCTCAAACTGCCACTTCCTTGACTGAAGCAAAATAAAGGATTATATGCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478047.1