RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CWC25 (Homo sapiens)

Ensembl gene IDs: ENSG00000273559, ENSG00000276761

Ensembl transcript IDs: ENST00000611845.1, ENST00000614790.5, ENST00000614868.2, ENST00000618122.4, ENST00000619299.4, ENST00000619462.4, ENST00000619818.4, ENST00000622665.1, ENST00000631509.1, ENST00000631731.1, ENST00000632717.1, ENST00000633577.1, ENST00000633741.1, ENST00000633854.1

Found 638 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCTGTTCACCTTAGAGTTGTGCAGTTTGCTGGGTCTTGGGGACCGTaGCCTTCTGCCCAGGGATCGAGACCTCCTGTCCCGGGACCCTGC +
Preference number: 1 (lower is better)
Translates to: PVHLRVVQFAGSWGP*PSAQGSRPPVPGPC
Trigger: GCAGGGTCCCGGGACAGGAGGTCTCGATCCCTGGGCAGAAGGTCACGGTCCCCAAGACCCAGCAAACTGCACAACTCTAAGGTGAACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
3UTR GCA 90 bp AACGAGAAGGGAGGCCAGTCGCCACATGCTCACCTCCCTGCACTGTaGTCATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGC +
Preference number: 1 (lower is better)
Translates to: NEKGGQSPHAHLPAL*SSSLLERSLLELLC
Trigger: GCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGTGCAGGGAGGTGAGCATGTGGCGACTGGCCTCCCTTCTCGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000622665.1
ENST00000631509.1
ENST00000632717.1
3UTR TCA 90 bp GGACCCTGCTTCCCTGGTGCTCTTCTTGCTGGCATGTCTTGGGGGTaGGTGGGAGGAGCTTCTGGATCTGGAATGGTTCTTCATCCCATG +
Preference number: 1 (lower is better)
Translates to: GPCFPGALLAGMSWG*VGGASGSGMVLHPM
Trigger: CATGGGATGAAGAACCATTCCAGATCCAGAAGCTCCTCCCACTCACCCCCAAGACATGCCAGCAAGAAGAGCACCAGGGAAGCAGGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
3UTR GCA 90 bp GTGAATGAGCAAGTGAATCAACGAGAAGGGAGGCCAGTCGCCACATaGTCACCTCCCTGCACTGTGCTCATCCTCGCTGCTGGAACGATC +
Preference number: 1 (lower is better)
Translates to: VNEQVNQREGRPVAT*SPPCTVLILAAGTI
Trigger: GATCGTTCCAGCAGCGAGGATGAGCACAGTGCAGGGAGGTGAGCATGTGGCGACTGGCCTCCCTTCTCGTTGATTCACTTGCTCATTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000622665.1
ENST00000631509.1
ENST00000632717.1
3UTR GCA 90 bp CGGTGGATGAACTTCCCATCCCGGGAGTCCAGCTTCTCTAGCCTCTaGTCCCGTTCCTCATCCTTAGCATGCCTCTTGAGGATGTTCAGT +
Preference number: 1 (lower is better)
Translates to: RWMNFPSRESSFSSL*SRSSSLACLLRMFS
Trigger: ACTGAACATCCTCAAGAGGCATGCTAAGGATGAGGAACGGGAGCAGAGGCTAGAGAAGCTGGACTCCCGGGATGGGAAGTTCATCCACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
3UTR GCA 90 bp GCCAGTCGCCACATGCTCACCTCCCTGCACTGTGCTCATCCTCGCTaGTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGT +
Preference number: 1 (lower is better)
Translates to: ASRHMLTSLHCAHPR*WNDHYSSFCAYVSC
Trigger: ACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGTGCAGGGAGGTGAGCATGTGGCGACTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000622665.1
ENST00000631509.1
ENST00000632717.1
3UTR TCA 90 bp GTCCTCCCGGATCTTGCTGGCCATGTCAAGAAGGGAATTGGCACCTaGTGGGGCAAAGATAGAGCCTGGGAGAAGTCCTGTTTCAGAAGA +
Preference number: 1 (lower is better)
Translates to: VLPDLAGHVKKGIGT*WGKDRAWEKSCFRR
Trigger: TCTTCTGAAACAGGACTTCTCCCAGGCTCTATCTTTGCCCCATCAGGTGCCAATTCCCTTCTTGACATGGCCAGCAAGATCCGGGAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
3UTR CCA 90 bp AGTCGCCACATGCTCACCTCCCTGCACTGTGCTCATCCTCGCTGCTaGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGCT +
Preference number: 1 (lower is better)
Translates to: SRHMLTSLHCAHPRC*NDHYSSFCAYVSCA
Trigger: AGCACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGTGCAGGGAGGTGAGCATGTGGCGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000622665.1
ENST00000631509.1
ENST00000632717.1
3UTR TCA 90 bp TTCTTCATCCCATGCCCTCTCTTTTGCTCTGCTGTCAGAGGACCCTaGAGACCCTGGTTACGGTCAGAGTTCCGGACCTGTAAGCCATAT +
Preference number: 1 (lower is better)
Translates to: FFIPCPLFCSAVRGP*RPWLRSEFRTCKPY
Trigger: ATATGGCTTACAGGTCCGGAACTCTGACCGTAACCAGGGTCTTCAGGGTCCTCTGACAGCAGAGCAAAAGAGAGGGCATGGGATGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
3UTR CCA 90 bp CATCTCCAAGGAACTCTAGCATTAGATGGCAAGCTCTGTGGGCACTaGGCCCATGTTCAAGTGTTCATCACTGAATGCCCAGTACCTGGC +
Preference number: 1 (lower is better)
Translates to: HLQGTLALDGKLCGH*AHVQVFITECPVPG
Trigger: GCCAGGTACTGGGCATTCAGTGATGAACACTTGAACATGGGCCCAGTGCCCACAGAGCTTGCCATCTAATGCTAGAGTTCCTTGGAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618122.4
ENST00000631509.1
3UTR TCA 90 bp TATCTGGGTGACACCAGAGAGGTTTCTGAAGGGTCTGGTGTACGCTaGGGCAGTGAAATAGGTCTGTTGGCACAGGTAAGAAGGAAGTGG +
Preference number: 1 (lower is better)
Translates to: YLGDTREVSEGSGVR*GSEIGLLAQVRRKW
Trigger: CCACTTCCTTCTTACCTGTGCCAACAGACCTATTTCACTGCCTCAGCGTACACCAGACCCTTCAGAAACCTCTCTGGTGTCACCCAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR CCA 90 bp GGTTACGGTCAGAGTTCCGGACCTGTAAGCCATATCCAGGGACTTTaGACAAAACAGGGGAGGAATTTGCCATCTTCTTCTGTGATCTCC +
Preference number: 1 (lower is better)
Translates to: GYGQSSGPVSHIQGL*TKQGRNLPSSSVIS
Trigger: GGAGATCACAGAAGAAGATGGCAAATTCCTCCCCTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCCGGAACTCTGACCGTAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
3UTR CCA 90 bp CCCAGGCTCCTCCTAAACCAGCCAGATTCAGAGAGAAAAACGAGCTaGCCTGCCTTATTGTATTACTTGCCATCAAGGTTCAATGTGGTT +
Preference number: 1 (lower is better)
Translates to: PRLLLNQPDSERKTS*PALLYYLPSRFNVV
Trigger: AACCACATTGAACCTTGATGGCAAGTAATACAATAAGGCAGGCCAGCTCGTTTTTCTCTCTGAATCTGGCTGGTTTAGGAGGAGCCTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR CCA 90 bp GGTTACGGTCAGAGTTCCGGACCTGTAAGCCATATCCAGGGACTTTaGACAAAACAGGGGAGGAATTTGCCATCTTCTTCTGTGATATTT +
Preference number: 1 (lower is better)
Translates to: GYGQSSGPVSHIQGL*TKQGRNLPSSSVIF
Trigger: AAATATCACAGAAGAAGATGGCAAATTCCTCCCCTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCCGGAACTCTGACCGTAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619462.4
ENST00000631509.1
ENST00000633854.1
3UTR GCA 90 bp GCTCCTCCTAAACCAGCCAGATTCAGAGAGAAAAACGAGCTGGCCTaGCTTATTGTATTACTTGCCATCAAGGTTCAATGTGGTTCTATT +
Preference number: 1 (lower is better)
Translates to: APPKPARFREKNELA*LIVLLAIKVQCGSI
Trigger: AATAGAACCACATTGAACCTTGATGGCAAGTAATACAATAAGGCAGGCCAGCTCGTTTTTCTCTCTGAATCTGGCTGGTTTAGGAGGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR GCA 90 bp CTGTGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTaGTTATGTTTCTTGTGCTTCTTTTTCTTCTCCTTCTTTTTCTTC +
Preference number: 1 (lower is better)
Translates to: LCSSSLLERSLLELL*LCFLCFFFFSFFFF
Trigger: GAAGAAAAAGAAGGAGAAGAAAAAGAAGCACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
3UTR CCA 90 bp ATTTTACTATACCTTTACACTGCCTACATTGGAGACTGCAAGCAGTaGAAAAGAATAGATACTCCAGATCTCGTCGATAAACCCAGGCTC +
Preference number: 1 (lower is better)
Translates to: ILLYLYTAYIGDCKQ*KRIDTPDLVDKPRL
Trigger: GAGCCTGGGTTTATCGACGAGATCTGGAGTATCTATTCTTTTCCACTGCTTGCAGTCTCCAATGTAGGCAGTGTAAAGGTATAGTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR CCA 90 bp ATAAAGCAATTTATAAGGAAAACCAGTGTTCCTCAACATGGGGTGTaGATCTTGGCTCAGAGCTTCTCGAGTCTCCTTTACAGAGTCTTT +
Preference number: 1 (lower is better)
Translates to: IKQFIRKTSVPQHGV*ILAQSFSSLLYRVF
Trigger: AAAGACTCTGTAAAGGAGACTCGAGAAGCTCTGAGCCAAGATCCACACCCCATGTTGAGGAACACTGGTTTTCCTTATAAATTGCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
3UTR GCA 90 bp CAGATTCAGAGAGAAAAACGAGCTGGCCTGCCTTATTGTATTACTTaGCATCAAGGTTCAATGTGGTTCTATTACCCAGTAAAGTCATTG +
Preference number: 1 (lower is better)
Translates to: QIQREKRAGLPYCIT*HQGSMWFYYPVKSL
Trigger: CAATGACTTTACTGGGTAATAGAACCACATTGAACCTTGATGGCAAGTAATACAATAAGGCAGGCCAGCTCGTTTTTCTCTCTGAATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR CCA 90 bp CGAGCTGGCCTGCCTTATTGTATTACTTGCCATCAAGGTTCAATGTaGTTCTATTACCCAGTAAAGTCATTGACCAAACAAGGTATTTTC +
Preference number: 1 (lower is better)
Translates to: RAGLPYCITCHQGSM*FYYPVKSLTKQGIF
Trigger: GAAAATACCTTGTTTGGTCAATGACTTTACTGGGTAATAGAACCACATTGAACCTTGATGGCAAGTAATACAATAAGGCAGGCCAGCTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR CCA 90 bp GTTACATTCTCTAGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTaGCATCATAAGTGTTCAAAAACAGAAATCCAAATACATTTTAAG +
Preference number: 1 (lower is better)
Translates to: VTFSRERSGFKHYSA*HHKCSKTEIQIHFK
Trigger: CTTAAAATGTATTTGGATTTCTGTTTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCTAGAGAATGTAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR-3UTR CCA 90 bp ACCGTGACCTTCTGCCCAGGGATCGAGACCTCCTGTCCCGGGACCCTGCTTCCCAGATGGCAAGCTCTGTaGGCACTGGGCCCATGTTCA +
Preference number: 2 (lower is better)
Translates to: TVTFCPGIETSCPGTLLPRWQAL*ALGPCS
Trigger: TGAACATGGGCCCAGTGCCCACAGAGCTTGCCATCT...GGGAAGCAGGGTCCCGGGACAGGAGGTCTCGATCCCTGGGCAGAAGGTCACGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619462.4
ENST00000631509.1
ENST00000633854.1
3UTR-3UTR GCA 90 bp GCCAGTCGCCACATGCTCACCTCCCTGCACTGTGCTCATCCTCGCTGCTGGAACGGTCCTCCCGGATCTTaGTGGCCATGTCAAGAAGGG +
Preference number: 2 (lower is better)
Translates to: ASRHMLTSLHCAHPRCWNGPPGS*WPCQEG
Trigger: CCCTTCTTGACATGGCCAGCAAGATCCGGGAGGACC...GTTCCAGCAGCGAGGATGAGCACAGTGCAGGGAGGTGAGCATGTGGCGACTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000622665.1
ENST00000631509.1
ENST00000632717.1
3UTR-3UTR GCA 90 bp TGTGCAGTTTGCTGGGTCTTGGGGACCGTGACCTTCTGCCCAGGGATCGAGACCCCTGTCCCGGGACCCTaGTTCCCTGGTGCTCTTCTT +
Preference number: 2 (lower is better)
Translates to: CAVCWVLGTVTFCPGIETPVPGP*FPGALL
Trigger: AAGAAGAGCACCAGGGAAGCAGGGTCCCGGGACAGG...GGTCTCGATCCCTGGGCAGAAGGTCACGGTCCCCAAGACCCAGCAAACTGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
3UTR-3UTR TCA 90 bp CAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAAACCCAGATCTCCTGACCTCGTaGTCCGCCCACCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: QALPPRWSSAHPLKSQNPDLLTS*SAHLSL
Trigger: GAGGCTGAGGTGGGCGGATCACGAGGTCAGGAGATC...TGGGTTTTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR-3UTR CCA 90 bp GCCAGTCGCCACATGCTCACCTCCCTGCACTGTGCTCATCCTCGCTGCTGGAACATGGGGTGTGGATCTTaGCTCAGAGCTTCTCGAGTC +
Preference number: 2 (lower is better)
Translates to: ASRHMLTSLHCAHPRCWNMGCGS*LRASRV
Trigger: GACTCGAGAAGCTCTGAGCCAAGATCCACACCCCAT...GTTCCAGCAGCGAGGATGAGCACAGTGCAGGGAGGTGAGCATGTGGCGACTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000622665.1
ENST00000631509.1
ENST00000632717.1
3UTR-3UTR CCA 90 bp TGTGCAGTTTGCTGGGTCTTGGGGACCGTGACCTTCTGCCCAGGGATCGAGACCAGTTGTGCAGTTTGCTaGGTCTTGGGGACCGTGACC +
Preference number: 2 (lower is better)
Translates to: CAVCWVLGTVTFCPGIETSCAVC*VLGTVT
Trigger: GGTCACGGTCCCCAAGACCCAGCAAACTGCACAACT...GGTCTCGATCCCTGGGCAGAAGGTCACGGTCCCCAAGACCCAGCAAACTGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
3UTR-3UTR TCA 90 bp CGCCACATGCTCACCTCCCTGCACTGTGCTCATCCTCGCTGCTGGAACGATCACAAGGGAATTGGCACCTaGTGGGGCAAAGATAGAGCC +
Preference number: 2 (lower is better)
Translates to: RHMLTSLHCAHPRCWNDHKGIGT*WGKDRA
Trigger: GGCTCTATCTTTGCCCCATCAGGTGCCAATTCCCTT...GTGATCGTTCCAGCAGCGAGGATGAGCACAGTGCAGGGAGGTGAGCATGTGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000622665.1
ENST00000631509.1
ENST00000632717.1
3UTR-3UTR GCA 90 bp GTGGCACAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAACAATCTCGGCTCACTaGAAGCTCCGCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: VAQALPPRWSSAHPLKSQTISAH*KLRLLG
Trigger: ACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGATTGT...TTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR-3UTR CCA 90 bp GACCCTGCTTCCCTGGTGCTCTTCTTGCTGGCATGTCTTGGGGGTGAGTGGGAGATGGGGTGTGGATCTTaGCTCAGAGCTTCTCGAGTC +
Preference number: 2 (lower is better)
Translates to: DPASLVLFLLACLGGEWEMGCGS*LRASRV
Trigger: GACTCGAGAAGCTCTGAGCCAAGATCCACACCCCAT...CTCCCACTCACCCCCAAGACATGCCAGCAAGAAGAGCACCAGGGAAGCAGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
3UTR-3UTR CCA 90 bp AGGGAGGCCAGTCGCCACATGCTCACCTCCCTGCACTGTGCTCATCCTCGCTGCAAACATATTTGTCAATaGGGCGCCCCAGCAGGTACT +
Preference number: 2 (lower is better)
Translates to: REASRHMLTSLHCAHPRCKHICQ*GAPAGT
Trigger: AGTACCTGCTGGGGCGCCCCATTGACAAATATGTTT...GCAGCGAGGATGAGCACAGTGCAGGGAGGTGAGCATGTGGCGACTGGCCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000622665.1
ENST00000631509.1
ENST00000632717.1
3UTR-3UTR TCA 90 bp TGTGCAGTTTGCTGGGTCTTGGGGACCGTGACCTTCTGCCCAGGGATCGAGACCTGTACGCTGAGGCAGTaGAATAGGTCTGTTGGCACA +
Preference number: 2 (lower is better)
Translates to: CAVCWVLGTVTFCPGIETCTLRQ*NRSVGT
Trigger: TGTGCCAACAGACCTATTTCACTGCCTCAGCGTACA...GGTCTCGATCCCTGGGCAGAAGGTCACGGTCCCCAAGACCCAGCAAACTGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
3UTR-3UTR TCA 90 bp GTGGCACAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAGGGTCTGGTGTACGCTaGGGCAGTGAAATAGGTCTG +
Preference number: 2 (lower is better)
Translates to: VAQALPPRWSSAHPLKSQGSGVR*GSEIGL
Trigger: CAGACCTATTTCACTGCCTCAGCGTACACCAGACCC...TTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
3UTR-3UTR GCA 90 bp CAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAAACCCAGGTCCTCCCGGATCTTaGTGGCCATGTCAAGAAGGG +
Preference number: 2 (lower is better)
Translates to: QALPPRWSSAHPLKSQNPGPPGS*WPCQEG
Trigger: CCCTTCTTGACATGGCCAGCAAGATCCGGGAGGACC...TGGGTTTTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
3UTR-3UTR CCA 90 bp GACCCTGCTTCCCTGGTGCTCTTCTTGCTGGCATGTCTTGGGGGTGAGTGGGAGATCCCACCAGGACCCTaGTACATCCAGTCCAACTTT +
Preference number: 2 (lower is better)
Translates to: DPASLVLFLLACLGGEWEIPPGP*YIQSNF
Trigger: AAAGTTGGACTGGATGTACCAGGGTCCTGGTGGGAT...CTCCCACTCACCCCCAAGACATGCCAGCAAGAAGAGCACCAGGGAAGCAGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
3UTR-3UTR TCA 90 bp CAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAAACCCAGGGTCTGGTGTACGCTaGGGCAGTGAAATAGGTCTG +
Preference number: 2 (lower is better)
Translates to: QALPPRWSSAHPLKSQNPGSGVR*GSEIGL
Trigger: CAGACCTATTTCACTGCCTCAGCGTACACCAGACCC...TGGGTTTTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
3UTR-3UTR TCA 90 bp CCTGCACTGTGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCAAGGGAATTGGCACCTaGTGGGGCAAAGATAGAGCC +
Preference number: 2 (lower is better)
Translates to: PALCSSSLLERSLLELLCKGIGT*WGKDRA
Trigger: GGCTCTATCTTTGCCCCATCAGGTGCCAATTCCCTT...GCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGTGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
3UTR-3UTR GCA 90 bp CCTGCACTGTGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCACCGAGATGGTCCAGTaGCCACCCGTTAAAGAGTCA +
Preference number: 2 (lower is better)
Translates to: PALCSSSLLERSLLELLCTEMVQ*PPVKES
Trigger: TGACTCTTTAACGGGTGGGCACTGGACCATCTCGGT...GCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGTGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
3UTR-3UTR GCA 90 bp CAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAAACCCACCATGCCCTCTCTTTTaGTCTGCTGTCAGAGGACCC +
Preference number: 2 (lower is better)
Translates to: QALPPRWSSAHPLKSQNPPCPLF*SAVRGP
Trigger: GGGTCCTCTGACAGCAGAGCAAAAGAGAGGGCATGG...TGGGTTTTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
3UTR-3UTR GCA 90 bp GACCCTGAAGACCCTGGTTACGGTCAGAGTTCCGGACCTGTAAGCCATATCCAGACCCTGCTTCCCTGGTaGTCTTCTTGCTGGCATGTC +
Preference number: 2 (lower is better)
Translates to: DPEDPGYGQSSGPVSHIQTLLPW*SSCWHV
Trigger: GACATGCCAGCAAGAAGAGCACCAGGGAAGCAGGGT...CTGGATATGGCTTACAGGTCCGGAACTCTGACCGTAACCAGGGTCTTCAGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
3UTR-3UTR CCA 90 bp GAATGCCCAGTACCTGGCAGCTTCCAGCACAGGGCAGGTGTTCATGTCTGTGGACCTCAACATGGGGTGTaGATCTTGGCTCAGAGCTTC +
Preference number: 2 (lower is better)
Translates to: ECPVPGSFQHRAGVHVCGPQHGV*ILAQSF
Trigger: GAAGCTCTGAGCCAAGATCCACACCCCATGTTGAGG...TCCACAGACATGAACACCTGCCCTGTGCTGGAAGCTGCCAGGTACTGGGCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000622665.1
ENST00000631509.1
ENST00000632717.1
3UTR-3UTR CCA 90 bp AGTTGTGCAGTTTGCTGGGTCTTGGGGACCGTGACCTTCTGCCCAGGGATCGAGATCCCACCAGGACCCTaGTACATCCAGTCCAACTTT +
Preference number: 2 (lower is better)
Translates to: SCAVCWVLGTVTFCPGIEIPPGP*YIQSNF
Trigger: AAAGTTGGACTGGATGTACCAGGGTCCTGGTGGGAT...CTCGATCCCTGGGCAGAAGGTCACGGTCCCCAAGACCCAGCAAACTGCACAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
3UTR-3UTR CCA 90 bp TGTGCAGTTTGCTGGGTCTTGGGGACCGTGACCTTCTGCCCAGGGATCGAGACCAAACATATTTGTCAATaGGGCGCCCCAGCAGGTACT +
Preference number: 2 (lower is better)
Translates to: CAVCWVLGTVTFCPGIETKHICQ*GAPAGT
Trigger: AGTACCTGCTGGGGCGCCCCATTGACAAATATGTTT...GGTCTCGATCCCTGGGCAGAAGGTCACGGTCCCCAAGACCCAGCAAACTGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
3UTR-3UTR CCA 90 bp TGTGCAGTTTGCTGGGTCTTGGGGACCGTGACCTTCTGCCCAGGGATCGAGACCCTTCTGGATCTGGAATaGTTCTTCATCCCATGCCCT +
Preference number: 2 (lower is better)
Translates to: CAVCWVLGTVTFCPGIETLLDLE*FFIPCP
Trigger: AGGGCATGGGATGAAGAACCATTCCAGATCCAGAAG...GGTCTCGATCCCTGGGCAGAAGGTCACGGTCCCCAAGACCCAGCAAACTGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
3UTR CAA 90 bp AAGAGTGGGTCCTCCCGGATCTTGCTGGCCATGTCAAGAAGGGAATaGGCACCTGATGGGGCAAAGATAGAGCCTGGGAGAAGTCCTGTT +
Preference number: 2 (lower is better)
Translates to: KSGSSRILLAMSRRE*APDGAKIEPGRSPV
Trigger: AACAGGACTTCTCCCAGGCTCTATCTTTGCCCCATCAGGTGCCAATTCCCTTCTTGACATGGCCAGCAAGATCCGGGAGGACCCACTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
3UTR-3UTR CCA 90 bp CTGGCCATGTCAAGAAGGGAATTGGCACCTGATGGGGCAAAGATAGAGCCTGGGATGGGGTGTGGATCTTaGCTCAGAGCTTCTCGAGTC +
Preference number: 2 (lower is better)
Translates to: LAMSRRELAPDGAKIEPGMGCGS*LRASRV
Trigger: GACTCGAGAAGCTCTGAGCCAAGATCCACACCCCAT...CCCAGGCTCTATCTTTGCCCCATCAGGTGCCAATTCCCTTCTTGACATGGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
3UTR-3UTR CCA 90 bp GAATCAACGAGAAGGGAGGCCAGTCGCCACATGCTCACCTCCCTGCACTGTGCTAAACATATTTGTCAATaGGGCGCCCCAGCAGGTACT +
Preference number: 2 (lower is better)
Translates to: ESTRREASRHMLTSLHCAKHICQ*GAPAGT
Trigger: AGTACCTGCTGGGGCGCCCCATTGACAAATATGTTT...AGCACAGTGCAGGGAGGTGAGCATGTGGCGACTGGCCTCCCTTCTCGTTGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000622665.1
ENST00000631509.1
ENST00000632717.1
3UTR-3UTR CCA 90 bp CCCTGCACTGTGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGTCTGATGATGAAGAGTaGGTCCTCCCGGATCTTGCT +
Preference number: 2 (lower is better)
Translates to: PCTVLILAAGTITTRASVSDDEE*VLPDLA
Trigger: AGCAAGATCCGGGAGGACCCACTCTTCATCATCAGA...CACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGTGCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622665.1
ENST00000632717.1
3UTR CAA 90 bp GGAGCTTCTGGATCTGGAATGGTTCTTCATCCCATGCCCTCTCTTTaGCTCTGCTGTCAGAGGACCCTGAAGACCCTGGTTACGGTCAGA +
Preference number: 2 (lower is better)
Translates to: GASGSGMVLHPMPSL*LCCQRTLKTLVTVR
Trigger: TCTGACCGTAACCAGGGTCTTCAGGGTCCTCTGACAGCAGAGCAAAAGAGAGGGCATGGGATGAAGAACCATTCCAGATCCAGAAGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
3UTR CAA 90 bp TTTCTCCTCCTCCTTCTGATGATGAAGAGTGGGTCCTCCCGGATCTaGCTGGCCATGTCAAGAAGGGAATTGGCACCTGATGGGGCAAAG +
Preference number: 2 (lower is better)
Translates to: FLLLLLMMKSGSSRI*LAMSRRELAPDGAK
Trigger: CTTTGCCCCATCAGGTGCCAATTCCCTTCTTGACATGGCCAGCAAGATCCGGGAGGACCCACTCTTCATCATCAGAAGGAGGAGGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622665.1
ENST00000632717.1
3UTR-3UTR TCA 90 bp CTGCAGAGAGTTTTCTGGTGTATCCGGGAGCATGTCGCCTTTGGTAGACCTCTTGGGTCTGGTGTACGCTaGGGCAGTGAAATAGGTCTG +
Preference number: 2 (lower is better)
Translates to: LQRVFWCIREHVAFGRPLGSGVR*GSEIGL
Trigger: CAGACCTATTTCACTGCCTCAGCGTACACCAGACCC...AAGAGGTCTACCAAAGGCGACATGCTCCCGGATACACCAGAAAACTCTCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
3UTR-3UTR TCA 90 bp CTCCTGTTCACCTTAGAGTTGTGCAGTTTGCTGGGTCTTGGGGACCGTGACCTTAAGGGAATTGGCACCTaGTGGGGCAAAGATAGAGCC +
Preference number: 2 (lower is better)
Translates to: LLFTLELCSLLGLGDRDLKGIGT*WGKDRA
Trigger: GGCTCTATCTTTGCCCCATCAGGTGCCAATTCCCTT...AAGGTCACGGTCCCCAAGACCCAGCAAACTGCACAACTCTAAGGTGAACAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
3UTR-3UTR TCA 90 bp TGTGCAGTTTGCTGGGTCTTGGGGACCGTGACCTTCTGCCCAGGGATCGAGACCTGCCATCTTCTTCTGTaGTATTTAGCATCTCCAAGG +
Preference number: 2 (lower is better)
Translates to: CAVCWVLGTVTFCPGIETCHLLL*YLASPR
Trigger: CCTTGGAGATGCTAAATATCACAGAAGAAGATGGCA...GGTCTCGATCCCTGGGCAGAAGGTCACGGTCCCCAAGACCCAGCAAACTGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619462.4
ENST00000631509.1
ENST00000633854.1
3UTR-3UTR CCA 90 bp GGCAAAGATAGAGCCTGGGAGAAGTCCTGTTTCAGAAGAGCAGCCTGCCTCCTTATGGGGTGTGGATCTTaGCTCAGAGCTTCTCGAGTC +
Preference number: 2 (lower is better)
Translates to: GKDRAWEKSCFRRAACLLMGCGS*LRASRV
Trigger: GACTCGAGAAGCTCTGAGCCAAGATCCACACCCCAT...AAGGAGGCAGGCTGCTCTTCTGAAACAGGACTTCTCCCAGGCTCTATCTTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
3UTR-3UTR CCA 90 bp CTCCTGTTCACCTTAGAGTTGTGCAGTTTGCTGGGTCTTGGGGACCGTGACCTTATGGGGTGTGGATCTTaGCTCAGAGCTTCTCGAGTC +
Preference number: 2 (lower is better)
Translates to: LLFTLELCSLLGLGDRDLMGCGS*LRASRV
Trigger: GACTCGAGAAGCTCTGAGCCAAGATCCACACCCCAT...AAGGTCACGGTCCCCAAGACCCAGCAAACTGCACAACTCTAAGGTGAACAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
3UTR-3UTR CCA 90 bp TTCACCTTAGAGTTGTGCAGTTTGCTGGGTCTTGGGGACCGTGACCTTCTGCCCATCCCACCAGGACCCTaGTACATCCAGTCCAACTTT +
Preference number: 2 (lower is better)
Translates to: FTLELCSLLGLGDRDLLPIPPGP*YIQSNF
Trigger: AAAGTTGGACTGGATGTACCAGGGTCCTGGTGGGAT...GGGCAGAAGGTCACGGTCCCCAAGACCCAGCAAACTGCACAACTCTAAGGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
3UTR-3UTR CCA 90 bp CCTGCACTGTGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCAAACATATTTGTCAATaGGGCGCCCCAGCAGGTACT +
Preference number: 2 (lower is better)
Translates to: PALCSSSLLERSLLELLCKHICQ*GAPAGT
Trigger: AGTACCTGCTGGGGCGCCCCATTGACAAATATGTTT...GCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGTGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
3UTR-3UTR CCA 90 bp GTGGCACAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAGGCAAAGATAGAGCCTaGGAGAAGTCCTGTTTCAGA +
Preference number: 2 (lower is better)
Translates to: VAQALPPRWSSAHPLKSQGKDRA*EKSCFR
Trigger: TCTGAAACAGGACTTCTCCCAGGCTCTATCTTTGCC...TTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
3UTR-3UTR CCA 90 bp CACATGCTCACCTCCCTGCACTGTGCTCATCCTCGCTGCTGGAACGATCACTACGGCAAAGATAGAGCCTaGGAGAAGTCCTGTTTCAGA +
Preference number: 2 (lower is better)
Translates to: HMLTSLHCAHPRCWNDHYGKDRA*EKSCFR
Trigger: TCTGAAACAGGACTTCTCCCAGGCTCTATCTTTGCC...GTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGTGCAGGGAGGTGAGCATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000622665.1
ENST00000631509.1
ENST00000632717.1
3UTR-3UTR CCA 90 bp CCCTGCACTGTGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGTGTCAAGAAGGGAATTaGCACCTGATGGGGCAAAGA +
Preference number: 2 (lower is better)
Translates to: PCTVLILAAGTITTRASVCQEGN*HLMGQR
Trigger: TCTTTGCCCCATCAGGTGCCAATTCCCTTCTTGACA...CACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGTGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
3UTR-3UTR CCA 90 bp ATGCGGTGGATGAACTTCCCATCCCGGGAGTCCAGCTTCTCTAGCCTCTGCTCCAGGAGCTTCTGGATCTaGAATGGTTCTTCATCCCAT +
Preference number: 2 (lower is better)
Translates to: MRWMNFPSRESSFSSLCSRSFWI*NGSSSH
Trigger: ATGGGATGAAGAACCATTCCAGATCCAGAAGCTCCT...GGAGCAGAGGCTAGAGAAGCTGGACTCCCGGGATGGGAAGTTCATCCACCGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
3UTR-3UTR CCA 90 bp TTGGCACCTGATGGGGCAAAGATAGAGCCTGGGAGAAGTCCTGTTTCAGAAGAGAGATGGCAAGCTCTGTaGGCACTGGGCCCATGTTCA +
Preference number: 2 (lower is better)
Translates to: LAPDGAKIEPGRSPVSEERWQAL*ALGPCS
Trigger: TGAACATGGGCCCAGTGCCCACAGAGCTTGCCATCT...CTCTTCTGAAACAGGACTTCTCCCAGGCTCTATCTTTGCCCCATCAGGTGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618122.4
ENST00000631509.1
3UTR-3UTR TCA 90 bp GTGGCACAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAATGTTTCAGGACTCAATaGAGCAGGGTCACTTTGAAC +
Preference number: 2 (lower is better)
Translates to: VAQALPPRWSSAHPLKSQCFRTQ*SRVTLN
Trigger: GTTCAAAGTGACCCTGCTTCATTGAGTCCTGAAACA...TTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
3UTR-3UTR TCA 90 bp GTGGCACAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAAGCTCTCAAAGGAAGTaGGCTGTTTCAGGACTCAAT +
Preference number: 2 (lower is better)
Translates to: VAQALPPRWSSAHPLKSQSSQRK*AVSGLN
Trigger: ATTGAGTCCTGAAACAGCTCACTTCCTTTGAGAGCT...TTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
3UTR-3UTR TCA 90 bp CTCCCGTTCCTCATCCTTAGCATGCCTCTTGAGGATGTTCAGTCTCTCCTCCTCTGTACGCTGAGGCAGTaGAATAGGTCTGTTGGCACA +
Preference number: 2 (lower is better)
Translates to: LPFLILSMPLEDVQSLLLCTLRQ*NRSVGT
Trigger: TGTGCCAACAGACCTATTTCACTGCCTCAGCGTACA...GAGGAGGAGAGACTGAACATCCTCAAGAGGCATGCTAAGGATGAGGAACGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
3UTR-3UTR TCA 90 bp CTGCAGAGAGTTTTCTGGTGTATCCGGGAGCATGTCGCCTTTGGTAGACCTCTTAAGGGAATTGGCACCTaGTGGGGCAAAGATAGAGCC +
Preference number: 2 (lower is better)
Translates to: LQRVFWCIREHVAFGRPLKGIGT*WGKDRA
Trigger: GGCTCTATCTTTGCCCCATCAGGTGCCAATTCCCTT...AAGAGGTCTACCAAAGGCGACATGCTCCCGGATACACCAGAAAACTCTCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
3UTR-3UTR TCA 90 bp GCTCACCTCCCTGCACTGTGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGTGCCATCTTCTTCTGTaGTATTTAGCATCTCCAAGG +
Preference number: 2 (lower is better)
Translates to: AHLPALCSSSLLERSLLECHLLL*YLASPR
Trigger: CCTTGGAGATGCTAAATATCACAGAAGAAGATGGCA...CTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGTGCAGGGAGGTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618122.4
ENST00000631509.1
3UTR-3UTR GCA 90 bp TTCACCTTAGAGTTGTGCAGTTTGCTGGGTCTTGGGGACCGTGACCTTCTGCCCTGGTTCTTCATCCCATaGCCTCTCTTTTGCTCTGCT +
Preference number: 2 (lower is better)
Translates to: FTLELCSLLGLGDRDLLPWFFIP*PLFCSA
Trigger: AGCAGAGCAAAAGAGAGGGCATGGGATGAAGAACCA...GGGCAGAAGGTCACGGTCCCCAAGACCCAGCAAACTGCACAACTCTAAGGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
3UTR-3UTR CCA 90 bp TTGGCACCTGATGGGGCAAAGATAGAGCCTGGGAGAAGTCCTGTTTCAGAAGAGCCTCAACATGGGGTGTaGATCTTGGCTCAGAGCTTC +
Preference number: 2 (lower is better)
Translates to: LAPDGAKIEPGRSPVSEEPQHGV*ILAQSF
Trigger: GAAGCTCTGAGCCAAGATCCACACCCCATGTTGAGG...CTCTTCTGAAACAGGACTTCTCCCAGGCTCTATCTTTGCCCCATCAGGTGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
3UTR-3UTR CCA 90 bp GTGGGAGGAGCTTCTGGATCTGGAATGGTTCTTCATCCCATGCCCTCTCTTTTGCCTCAACATGGGGTGTaGATCTTGGCTCAGAGCTTC +
Preference number: 2 (lower is better)
Translates to: VGGASGSGMVLHPMPSLLPQHGV*ILAQSF
Trigger: GAAGCTCTGAGCCAAGATCCACACCCCATGTTGAGG...CAAAAGAGAGGGCATGGGATGAAGAACCATTCCAGATCCAGAAGCTCCTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
3UTR-3UTR CCA 90 bp CTGCACTGTGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTGGCAAAGATAGAGCCTaGGAGAAGTCCTGTTTCAGA +
Preference number: 2 (lower is better)
Translates to: LHCAHPRCWNDHYSSFCAGKDRA*EKSCFR
Trigger: TCTGAAACAGGACTTCTCCCAGGCTCTATCTTTGCC...AGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
3UTR-3UTR CCA 90 bp GACCCTGAAGACCCTGGTTACGGTCAGAGTTCCGGACCTGTAAGCCATATCCAGGGCAAAGATAGAGCCTaGGAGAAGTCCTGTTTCAGA +
Preference number: 2 (lower is better)
Translates to: DPEDPGYGQSSGPVSHIQGKDRA*EKSCFR
Trigger: TCTGAAACAGGACTTCTCCCAGGCTCTATCTTTGCC...CTGGATATGGCTTACAGGTCCGGAACTCTGACCGTAACCAGGGTCTTCAGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
3UTR-3UTR CCA 90 bp CACTGTGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATCCTGATGATGAAGAGTaGGTCCTCCCGGATCTTGCT +
Preference number: 2 (lower is better)
Translates to: HCAHPRCWNDHYSSFCAYPDDEE*VLPDLA
Trigger: AGCAAGATCCGGGAGGACCCACTCTTCATCATCAGG...ATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
3UTR-3UTR CCA 90 bp GACCCTGAAGACCCTGGTTACGGTCAGAGTTCCGGACCTGTAAGCCATATCCAGAGTGGGAGGAGCTTCTaGATCTGGAATGGTTCTTCA +
Preference number: 2 (lower is better)
Translates to: DPEDPGYGQSSGPVSHIQSGRSF*IWNGSS
Trigger: TGAAGAACCATTCCAGATCCAGAAGCTCCTCCCACT...CTGGATATGGCTTACAGGTCCGGAACTCTGACCGTAACCAGGGTCTTCAGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
3UTR-3UTR CCA 90 bp CCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGCTAGATGGCAAGCTCTGTaGGCACTGGGCCCATGTTCA +
Preference number: 2 (lower is better)
Translates to: PRCWNDHYSSFCAYVSCARWQAL*ALGPCS
Trigger: TGAACATGGGCCCAGTGCCCACAGAGCTTGCCATCT...AGCACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618122.4
ENST00000631509.1
3UTR-3UTR TCA 90 bp CAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAAACCCAAGCTCTCAAAGGAAGTaGGCTGTTTCAGGACTCAAT +
Preference number: 2 (lower is better)
Translates to: QALPPRWSSAHPLKSQNPSSQRK*AVSGLN
Trigger: ATTGAGTCCTGAAACAGCTCACTTCCTTTGAGAGCT...TGGGTTTTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
3UTR-3UTR TCA 90 bp TATGTTACATTCTCTAGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATGATCTCCTGACCTCGTaGTCCGCCCACCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: YVTFSRERSGFKHYSAWHDLLTS*SAHLSL
Trigger: GAGGCTGAGGTGGGCGGATCACGAGGTCAGGAGATC...ATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCTAGAGAATGTAACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR-3UTR GCA 90 bp CTCCTCCTAAACCAGCCAGATTCAGAGAGAAAAACGAGCTGGCCTGCCTTATTGACCGAGATGGTCCAGTaGCCACCCGTTAAAGAGTCA +
Preference number: 2 (lower is better)
Translates to: LLLNQPDSERKTSWPALLTEMVQ*PPVKES
Trigger: TGACTCTTTAACGGGTGGGCACTGGACCATCTCGGT...CAATAAGGCAGGCCAGCTCGTTTTTCTCTCTGAATCTGGCTGGTTTAGGAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR-3UTR GCA 90 bp ATGCGGTGGATGAACTTCCCATCCCGGGAGTCCAGCTTCTCTAGCCTCTGCTCCTTTTCCATCATCTCTTaGCGTTTTCGCTCTAATTCC +
Preference number: 2 (lower is better)
Translates to: MRWMNFPSRESSFSSLCSFSIIS*RFRSNS
Trigger: GGAATTAGAGCGAAAACGGCAAGAGATGATGGAAAA...GGAGCAGAGGCTAGAGAAGCTGGACTCCCGGGATGGGAAGTTCATCCACCGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
3UTR-3UTR CCA 90 bp GTGGCACAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAGAGAGAAAAACGAGCTaGCCTGCCTTATTGTATTAC +
Preference number: 2 (lower is better)
Translates to: VAQALPPRWSSAHPLKSQERKTS*PALLYY
Trigger: GTAATACAATAAGGCAGGCCAGCTCGTTTTTCTCTC...TTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR-3UTR CCA 90 bp TGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCCCTCAACATGGGGTGTaGATCTTGGCTCAGAGCTTC +
Preference number: 2 (lower is better)
Translates to: CSSSLLERSLLELLCLCFPQHGV*ILAQSF
Trigger: GAAGCTCTGAGCCAAGATCCACACCCCATGTTGAGG...GAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
3UTR-3UTR CCA 90 bp CTCCTGTTCACCTTAGAGTTGTGCAGTTTGCTGGGTCTTGGGGACCGTGACCTTTGTCAAGAAGGGAATTaGCACCTGATGGGGCAAAGA +
Preference number: 2 (lower is better)
Translates to: LLFTLELCSLLGLGDRDLCQEGN*HLMGQR
Trigger: TCTTTGCCCCATCAGGTGCCAATTCCCTTCTTGACA...AAGGTCACGGTCCCCAAGACCCAGCAAACTGCACAACTCTAAGGTGAACAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
3UTR-3UTR CCA 90 bp TGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCCCTGATGATGAAGAGTaGGTCCTCCCGGATCTTGCT +
Preference number: 2 (lower is better)
Translates to: CSSSLLERSLLELLCLCFPDDEE*VLPDLA
Trigger: AGCAAGATCCGGGAGGACCCACTCTTCATCATCAGG...GAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
3UTR-3UTR CCA 90 bp CTCCCGTTCCTCATCCTTAGCATGCCTCTTGAGGATGTTCAGTCTCTCCTCCTCCTTCTGGATCTGGAATaGTTCTTCATCCCATGCCCT +
Preference number: 2 (lower is better)
Translates to: LPFLILSMPLEDVQSLLLLLDLE*FFIPCP
Trigger: AGGGCATGGGATGAAGAACCATTCCAGATCCAGAAG...GAGGAGGAGAGACTGAACATCCTCAAGAGGCATGCTAAGGATGAGGAACGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
3UTR-3UTR CCA 90 bp TTCCGGACCTGTAAGCCATATCCAGGGACTTTGGACAAAACAGGGGAGGAATTTAGATGGCAAGCTCTGTaGGCACTGGGCCCATGTTCA +
Preference number: 2 (lower is better)
Translates to: FRTCKPYPGTLDKTGEEFRWQAL*ALGPCS
Trigger: TGAACATGGGCCCAGTGCCCACAGAGCTTGCCATCT...AAATTCCTCCCCTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCCGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619462.4
ENST00000631509.1
ENST00000633854.1
3UTR-3UTR TCA 90 bp GTGGCACAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAACTACACGGTAAGAAGTaGAGCCGCAAAATAAAAACT +
Preference number: 2 (lower is better)
Translates to: VAQALPPRWSSAHPLKSQLHGKK*SRKIKT
Trigger: AGTTTTTATTTTGCGGCTTCACTTCTTACCGTGTAG...TTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR-3UTR GCA 90 bp ATGTTACATTCTCTAGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATCGCCCAGCTAATGTaGGGGTCAAGAGGGCCTAGG +
Preference number: 2 (lower is better)
Translates to: MLHSLGKDRVSSITVPGIIAQLM*GSRGPR
Trigger: CCTAGGCCCTCTTGACCCGCACATTAGCTGGGCGAT...GATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCTAGAGAATGTAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR-3UTR CCA 90 bp GTGGCACAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAACACTTTGAACACTGGTaGTTTGACATCTGTGAAAGA +
Preference number: 2 (lower is better)
Translates to: VAQALPPRWSSAHPLKSQHFEHW*FDICER
Trigger: TCTTTCACAGATGTCAAACCACCAGTGTTCAAAGTG...TTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
3UTR-3UTR CCA 90 bp TTCCTCTGCAGAGAGTTTTCTGGTGTATCCGGGAGCATGTCGCCTTTGGTAGACTGTCAAGAAGGGAATTaGCACCTGATGGGGCAAAGA +
Preference number: 2 (lower is better)
Translates to: FLCREFSGVSGSMSPLVDCQEGN*HLMGQR
Trigger: TCTTTGCCCCATCAGGTGCCAATTCCCTTCTTGACA...GTCTACCAAAGGCGACATGCTCCCGGATACACCAGAAAACTCTCTGCAGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
3UTR-3UTR TCA 90 bp CTCCTGTTCACCTTAGAGTTGTGCAGTTTGCTGGGTCTTGGGGACCGTGACCTTTGCCATCTTCTTCTGTaGTATTTAGCATCTCCAAGG +
Preference number: 2 (lower is better)
Translates to: LLFTLELCSLLGLGDRDLCHLLL*YLASPR
Trigger: CCTTGGAGATGCTAAATATCACAGAAGAAGATGGCA...AAGGTCACGGTCCCCAAGACCCAGCAAACTGCACAACTCTAAGGTGAACAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619462.4
ENST00000631509.1
ENST00000633854.1
3UTR-3UTR CCA 90 bp GCACAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAAACCACTTTGAACACTGGTaGTTTGACATCTGTGAAAGA +
Preference number: 2 (lower is better)
Translates to: AQALPPRWSSAHPLKSQNHFEHW*FDICER
Trigger: TCTTTCACAGATGTCAAACCACCAGTGTTCAAAGTG...GTTTTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
3UTR-3UTR CCA 90 bp GATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAACAGAAAGCACTCCCACCGAGATaGTCCAGTGCCCACCCGTTA +
Preference number: 2 (lower is better)
Translates to: DRVSSITVPGIISVQKQKALPPR*SSAHPL
Trigger: TAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGC...TTTCTGTTTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR-3UTR CCA 90 bp GAGTCAAAACCCAAAGTTACTGAGTGTCCCACAAAGCAAGTCACACTAGCTCTCCCTCAACATGGGGTGTaGATCTTGGCTCAGAGCTTC +
Preference number: 2 (lower is better)
Translates to: ESKPKVTECPTKQVTLALPQHGV*ILAQSF
Trigger: GAAGCTCTGAGCCAAGATCCACACCCCATGTTGAGG...GAGAGCTAGTGTGACTTGCTTTGTGGGACACTCAGTAACTTTGGGTTTTGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
3UTR-3UTR CCA 90 bp CTGCAGAGAGTTTTCTGGTGTATCCGGGAGCATGTCGCCTTTGGTAGACCTCTTCATATCCAGGGACTTTaGACAAAACAGGGGAGGAAT +
Preference number: 2 (lower is better)
Translates to: LQRVFWCIREHVAFGRPLHIQGL*TKQGRN
Trigger: ATTCCTCCCCTGTTTTGTCCAAAGTCCCTGGATATG...AAGAGGTCTACCAAAGGCGACATGCTCCCGGATACACCAGAAAACTCTCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
3UTR-3UTR TCA 90 bp AGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAACACCAGAGAGGTTTCTaGAGGGTCTGGTGTACGCTG +
Preference number: 2 (lower is better)
Translates to: RERSGFKHYSAWHHKCSKHQRGF*RVWCTL
Trigger: CAGCGTACACCAGACCCTTCAGAAACCTCTCTGGTG...TTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR-3UTR CCA 90 bp CTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGCTTCTTTATGGGGTGTGGATCTTaGCTCAGAGCTTCTCGAGTC +
Preference number: 2 (lower is better)
Translates to: LLERSLLELLCLCFLCFFMGCGS*LRASRV
Trigger: GACTCGAGAAGCTCTGAGCCAAGATCCACACCCCAT...AAAGAAGCACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
3UTR-3UTR CCA 90 bp ATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGAAACATATTTGTCAATaGGGCGCCCCAGCAGGTACT +
Preference number: 2 (lower is better)
Translates to: ILAAGTITTRASVLMFLVKHICQ*GAPAGT
Trigger: AGTACCTGCTGGGGCGCCCCATTGACAAATATGTTT...CACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
3UTR-3UTR CCA 90 bp ATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGTGTCAAGAAGGGAATTaGCACCTGATGGGGCAAAGA +
Preference number: 2 (lower is better)
Translates to: ILAAGTITTRASVLMFLVCQEGN*HLMGQR
Trigger: TCTTTGCCCCATCAGGTGCCAATTCCCTTCTTGACA...CACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
3UTR-3UTR TCA 90 bp CTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGCTTTGTTTCAGGACTCAATaGAGCAGGGTCACTTTGAAC +
Preference number: 2 (lower is better)
Translates to: LAAGTITTRASVLMFLVLCFRTQ*SRVTLN
Trigger: GTTCAAAGTGACCCTGCTTCATTGAGTCCTGAAACA...AAGCACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
3UTR-3UTR TCA 90 bp GATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAACAGAAACACCAGAGAGGTTTCTaGAGGGTCTGGTGTACGCTG +
Preference number: 2 (lower is better)
Translates to: DRVSSITVPGIISVQKQKHQRGF*RVWCTL
Trigger: CAGCGTACACCAGACCCTTCAGAAACCTCTCTGGTG...TTTCTGTTTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR-3UTR TCA 90 bp AGTGGGAGGAGCTTCTGGATCTGGAATGGTTCTTCATCCCATGCCCTCTCTTTTTGCCATCTTCTTCTGTaGTATTTAGCATCTCCAAGG +
Preference number: 2 (lower is better)
Translates to: SGRSFWIWNGSSSHALSFCHLLL*YLASPR
Trigger: CCTTGGAGATGCTAAATATCACAGAAGAAGATGGCA...AAAAGAGAGGGCATGGGATGAAGAACCATTCCAGATCCAGAAGCTCCTCCCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619462.4
ENST00000631509.1
ENST00000633854.1
3UTR-3UTR CCA 90 bp CTGCAGAGAGTTTTCTGGTGTATCCGGGAGCATGTCGCCTTTGGTAGACCTCTTCACTTTGAACACTGGTaGTTTGACATCTGTGAAAGA +
Preference number: 2 (lower is better)
Translates to: LQRVFWCIREHVAFGRPLHFEHW*FDICER
Trigger: TCTTTCACAGATGTCAAACCACCAGTGTTCAAAGTG...AAGAGGTCTACCAAAGGCGACATGCTCCCGGATACACCAGAAAACTCTCTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
3UTR-3UTR CCA 90 bp GCCATGGAGCATATTGGCAATTTGGTTCTGACTCCTAAAATCATTTTACTATACGCACTCCCACCGAGATaGTCCAGTGCCCACCCGTTA +
Preference number: 2 (lower is better)
Translates to: AMEHIGNLVLTPKIILLYALPPR*SSAHPL
Trigger: TAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGC...GTATAGTAAAATGATTTTAGGAGTCAGAACCAAATTGCCAATATGCTCCATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR-3UTR CCA 90 bp CTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGCTTCTTTTTCCCTGATGATGAAGAGTaGGTCCTCCCGGATCTTGCT +
Preference number: 2 (lower is better)
Translates to: LERSLLELLCLCFLCFFFPDDEE*VLPDLA
Trigger: AGCAAGATCCGGGAGGACCCACTCTTCATCATCAGG...GAAAAAGAAGCACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
3UTR-3UTR TCA 90 bp AGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAATGTACGCTGAGGCAGTaGAATAGGTCTGTTGGCACA +
Preference number: 2 (lower is better)
Translates to: RERSGFKHYSAWHHKCSKCTLRQ*NRSVGT
Trigger: TGTGCCAACAGACCTATTTCACTGCCTCAGCGTACA...TTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR-3UTR CCA 90 bp GAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAACAGGCCTAGGAGTTCACTaGTCAAATGAGGGCTTCTGG +
Preference number: 2 (lower is better)
Translates to: ERSGFKHYSAWHHKCSKTGLGVH*SNEGFW
Trigger: CCAGAAGCCCTCATTTGACCAGTGAACTCCTAGGCC...TGTTTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR-3UTR TCA 90 bp ATGTTACATTCTCTAGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCTGTTTCAGGACTCAATaGAGCAGGGTCACTTTGAAC +
Preference number: 2 (lower is better)
Translates to: MLHSLGKDRVSSITVPGICFRTQ*SRVTLN
Trigger: GTTCAAAGTGACCCTGCTTCATTGAGTCCTGAAACA...GATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCTAGAGAATGTAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR-3UTR TCA 90 bp GATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAACAGAAATGTACGCTGAGGCAGTaGAATAGGTCTGTTGGCACA +
Preference number: 2 (lower is better)
Translates to: DRVSSITVPGIISVQKQKCTLRQ*NRSVGT
Trigger: TGTGCCAACAGACCTATTTCACTGCCTCAGCGTACA...TTTCTGTTTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR-3UTR CCA 90 bp CTCCTCCTAAACCAGCCAGATTCAGAGAGAAAAACGAGCTGGCCTGCCTTATTGCATCAAGGTTCAATGTaGTTCTATTACCCAGTAAAG +
Preference number: 2 (lower is better)
Translates to: LLLNQPDSERKTSWPALLHQGSM*FYYPVK
Trigger: CTTTACTGGGTAATAGAACCACATTGAACCTTGATG...CAATAAGGCAGGCCAGCTCGTTTTTCTCTCTGAATCTGGCTGGTTTAGGAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR-3UTR CCA 90 bp ATGTTACATTCTCTAGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCTTACACTGCCTACATTaGAGACTGCAAGCAGTGGAA +
Preference number: 2 (lower is better)
Translates to: MLHSLGKDRVSSITVPGILHCLH*RLQAVE
Trigger: TTCCACTGCTTGCAGTCTCCAATGTAGGCAGTGTAA...GATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCTAGAGAATGTAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR-3UTR CCA 90 bp GAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAACAGTAAAGACAGGAGAGTaGCCCCTCGAGGGTTTTGTT +
Preference number: 2 (lower is better)
Translates to: ERSGFKHYSAWHHKCSKTVKTGE*PLEGFV
Trigger: AACAAAACCCTCGAGGGGCCACTCTCCTGTCTTTAC...TGTTTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR CAA 90 bp CTAAACCAGCCAGATTCAGAGAGAAAAACGAGCTGGCCTGCCTTATaGTATTACTTGCCATCAAGGTTCAATGTGGTTCTATTACCCAGT +
Preference number: 2 (lower is better)
Translates to: LNQPDSERKTSWPAL*YYLPSRFNVVLLPS
Trigger: ACTGGGTAATAGAACCACATTGAACCTTGATGGCAAGTAATACAATAAGGCAGGCCAGCTCGTTTTTCTCTCTGAATCTGGCTGGTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR-3UTR TCA 90 bp GATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAACAGAAATCACTCCCTTGGCTTTaGCCTAACCTGACATCATTC +
Preference number: 2 (lower is better)
Translates to: DRVSSITVPGIISVQKQKSLPWL*PNLTSF
Trigger: GAATGATGTCAGGTTAGGTCAAAGCCAAGGGAGTGA...TTTCTGTTTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR-3UTR CCA 90 bp TATGTTACATTCTCTAGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATAGCCATGGAGCATATTaGCAATTTGGTTCTGACTCC +
Preference number: 2 (lower is better)
Translates to: YVTFSRERSGFKHYSAWHSHGAY*QFGSDS
Trigger: GGAGTCAGAACCAAATTGCCAATATGCTCCATGGCT...ATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCTAGAGAATGTAACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR-3UTR TCA 90 bp TATGTTACATTCTCTAGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATGGCTTTGACCTAACCTaGCATCATTCTGTCACATTA +
Preference number: 2 (lower is better)
Translates to: YVTFSRERSGFKHYSAWHGFDLT*HHSVTL
Trigger: TAATGTGACAGAATGATGTCAGGTTAGGTCAAAGCC...ATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCTAGAGAATGTAACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR-3UTR GCA 90 bp AGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAAAAAACGAGCTGGCCTaGCTTATTGTATTACTTGCC +
Preference number: 2 (lower is better)
Translates to: RERSGFKHYSAWHHKCSKKNELA*LIVLLA
Trigger: GGCAAGTAATACAATAAGGCAGGCCAGCTCGTTTTT...TTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCT
42% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR-3UTR GCA 90 bp TATGTTACATTCTCTAGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATAAAAACGAGCTGGCCTaGCTTATTGTATTACTTGCC +
Preference number: 2 (lower is better)
Translates to: YVTFSRERSGFKHYSAWHKNELA*LIVLLA
Trigger: GGCAAGTAATACAATAAGGCAGGCCAGCTCGTTTTT...ATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCTAGAGAATGTAACATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR-3UTR GCA 90 bp ATGTTACATTCTCTAGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCACTATACCTTTACACTaGCTACATTGGAGACTGCAA +
Preference number: 2 (lower is better)
Translates to: MLHSLGKDRVSSITVPGITIPLH*LHWRLQ
Trigger: TTGCAGTCTCCAATGTAGGCAGTGTAAAGGTATAGT...GATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCTAGAGAATGTAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR-3UTR CCA 90 bp TATGTTACATTCTCTAGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATGGAGACTGCAAGCAGTaGAAAAGAATAGATACTCCA +
Preference number: 2 (lower is better)
Translates to: YVTFSRERSGFKHYSAWHGDCKQ*KRIDTP
Trigger: TGGAGTATCTATTCTTTTCCACTGCTTGCAGTCTCC...ATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCTAGAGAATGTAACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR-3UTR CCA 90 bp GATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAACAGAAAAGCCATGGAGCATATTaGCAATTTGGTTCTGACTCC +
Preference number: 2 (lower is better)
Translates to: DRVSSITVPGIISVQKQKSHGAY*QFGSDS
Trigger: GGAGTCAGAACCAAATTGCCAATATGCTCCATGGCT...TTTCTGTTTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR CAA 90 bp CCAGATTCAGAGAGAAAAACGAGCTGGCCTGCCTTATTGTATTACTaGCCATCAAGGTTCAATGTGGTTCTATTACCCAGTAAAGTCATT +
Preference number: 2 (lower is better)
Translates to: PDSERKTSWPALLYY*PSRFNVVLLPSKVI
Trigger: AATGACTTTACTGGGTAATAGAACCACATTGAACCTTGATGGCAAGTAATACAATAAGGCAGGCCAGCTCGTTTTTCTCTCTGAATCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR-3UTR TCA 90 bp GAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAACAGGCTTTGACCTAACCTaGCATCATTCTGTCACATTA +
Preference number: 2 (lower is better)
Translates to: ERSGFKHYSAWHHKCSKTGFDLT*HHSVTL
Trigger: TAATGTGACAGAATGATGTCAGGTTAGGTCAAAGCC...TGTTTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR-3UTR TCA 90 bp GCCATGGAGCATATTGGCAATTTGGTTCTGACTCCTAAAATCATTTTACTATACTCACTCCCTTGGCTTTaGCCTAACCTGACATCATTC +
Preference number: 2 (lower is better)
Translates to: AMEHIGNLVLTPKIILLYSLPWL*PNLTSF
Trigger: GAATGATGTCAGGTTAGGTCAAAGCCAAGGGAGTGA...GTATAGTAAAATGATTTTAGGAGTCAGAACCAAATTGCCAATATGCTCCATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR-3UTR TCA 90 bp AGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAACTACACGGTAAGAAGTaGAGCCGCAAAATAAAAACT +
Preference number: 2 (lower is better)
Translates to: RERSGFKHYSAWHHKCSKLHGKK*SRKIKT
Trigger: AGTTTTTATTTTGCGGCTTCACTTCTTACCGTGTAG...TTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR-3UTR CCA 90 bp ATGTTACATTCTCTAGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCCATCAAGGTTCAATGTaGTTCTATTACCCAGTAAAG +
Preference number: 2 (lower is better)
Translates to: MLHSLGKDRVSSITVPGIHQGSM*FYYPVK
Trigger: CTTTACTGGGTAATAGAACCACATTGAACCTTGATG...GATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCTAGAGAATGTAACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR-3UTR TCA 90 bp AGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAATTTTTAGTACCTGACTaGAAGAGACTAGCAAACAAC +
Preference number: 2 (lower is better)
Translates to: RERSGFKHYSAWHHKCSKFLVPD*KRLANN
Trigger: GTTGTTTGCTAGTCTCTTTCAGTCAGGTACTAAAAA...TTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR GCA 72 bp TGTGCAGTTTGCTGGGTCTTGGGGACCGTGACCTTCTaGCCAGGGATCGAGACCTCCTGTCCCGGGACCCTG +
Preference number: 3 (lower is better)
Translates to: CAVCWVLGTVTF*PGIETSCPGTL
Trigger: CAGGGTCCCGGGACAGGAGGTCTCGATCCCTGGGCAGAAGGTCACGGTCCCCAAGACCCAGCAAACTGCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
3UTR GCA 72 bp TCCTGTCCCGGGACCCTGCTTCCCTGGTGCTCTTCTTaGTGGCATGTCTTGGGGGTGAGTGGGAGGAGCTTC +
Preference number: 3 (lower is better)
Translates to: SCPGTLLPWCSS*WHVLGVSGRSF
Trigger: GAAGCTCCTCCCACTCACCCCCAAGACATGCCAGCAAGAAGAGCACCAGGGAAGCAGGGTCCCGGGACAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
3UTR GCA 72 bp TCTGCCCAGGGATCGAGACCTCCTGTCCCGGGACCCTaGTTCCCTGGTGCTCTTCTTGCTGGCATGTCTTGG +
Preference number: 3 (lower is better)
Translates to: SAQGSRPPVPGP*FPGALLAGMSW
Trigger: CCAAGACATGCCAGCAAGAAGAGCACCAGGGAAGCAGGGTCCCGGGACAGGAGGTCTCGATCCCTGGGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
3UTR-3UTR CAA 90 bp ACGAGAAGGGAGGCCAGTCGCCACATGCTCACCTCCCTGCACTGTGCTCATCCTGGGTCCTCCCGGATCTaGCTGGCCATGTCAAGAAGG +
Preference number: 3 (lower is better)
Translates to: TRREASRHMLTSLHCAHPGSSRI*LAMSRR
Trigger: CCTTCTTGACATGGCCAGCAAGATCCGGGAGGACCC...AGGATGAGCACAGTGCAGGGAGGTGAGCATGTGGCGACTGGCCTCCCTTCTCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000622665.1
ENST00000631509.1
ENST00000632717.1
3UTR GCA 72 bp GGAGGCCAGTCGCCACATGCTCACCTCCCTGCACTGTaGTCATCCTCGCTGCTGGAACGATCACTACTCGAG +
Preference number: 3 (lower is better)
Translates to: GGQSPHAHLPAL*SSSLLERSLLE
Trigger: CTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGTGCAGGGAGGTGAGCATGTGGCGACTGGCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000622665.1
ENST00000631509.1
ENST00000632717.1
3UTR-3UTR CAA 90 bp TGTGCAGTTTGCTGGGTCTTGGGGACCGTGACCTTCTGCCCAGGGATCGAGACCTCCCTGGTGCTCTTCTaGCTGGCATGTCTTGGGGGT +
Preference number: 3 (lower is better)
Translates to: CAVCWVLGTVTFCPGIETSLVLF*LACLGG
Trigger: ACCCCCAAGACATGCCAGCAAGAAGAGCACCAGGGA...GGTCTCGATCCCTGGGCAGAAGGTCACGGTCCCCAAGACCCAGCAAACTGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
3UTR TCA 72 bp CTTAGAGTTGTGCAGTTTGCTGGGTCTTGGGGACCGTaGCCTTCTGCCCAGGGATCGAGACCTCCTGTCCCG +
Preference number: 3 (lower is better)
Translates to: LRVVQFAGSWGP*PSAQGSRPPVP
Trigger: CGGGACAGGAGGTCTCGATCCCTGGGCAGAAGGTCACGGTCCCCAAGACCCAGCAAACTGCACAACTCTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
3UTR-3UTR CAA 90 bp CTGCACTGTGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTGGGTCCTCCCGGATCTaGCTGGCCATGTCAAGAAGG +
Preference number: 3 (lower is better)
Translates to: LHCAHPRCWNDHYSSFCAGSSRI*LAMSRR
Trigger: CCTTCTTGACATGGCCAGCAAGATCCGGGAGGACCC...AGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
3UTR TCA 72 bp CTGTGGGCACTGGGCCCATGTTCAAGTGTTCATCACTaGATGCCCAGTACCTGGCAGCTTCCAGCACAGGGC +
Preference number: 3 (lower is better)
Translates to: LWALGPCSSVHH*MPSTWQLPAQG
Trigger: GCCCTGTGCTGGAAGCTGCCAGGTACTGGGCATTCAGTGATGAACACTTGAACATGGGCCCAGTGCCCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618122.4
ENST00000631509.1
3UTR GCA 72 bp CAAGTGAATCAACGAGAAGGGAGGCCAGTCGCCACATaGTCACCTCCCTGCACTGTGCTCATCCTCGCTGCT +
Preference number: 3 (lower is better)
Translates to: QVNQREGRPVAT*SPPCTVLILAA
Trigger: AGCAGCGAGGATGAGCACAGTGCAGGGAGGTGAGCATGTGGCGACTGGCCTCCCTTCTCGTTGATTCACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000622665.1
ENST00000631509.1
ENST00000632717.1
3UTR GCA 72 bp GGGCACTGGGCCCATGTTCAAGTGTTCATCACTGAATaGCCAGTACCTGGCAGCTTCCAGCACAGGGCAGGT +
Preference number: 3 (lower is better)
Translates to: GHWAHVQVFITE*PVPGSFQHRAG
Trigger: ACCTGCCCTGTGCTGGAAGCTGCCAGGTACTGGGCATTCAGTGATGAACACTTGAACATGGGCCCAGTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618122.4
ENST00000631509.1
3UTR-3UTR CAA 90 bp CCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGCTGGGTCCTCCCGGATCTaGCTGGCCATGTCAAGAAGG +
Preference number: 3 (lower is better)
Translates to: PRCWNDHYSSFCAYVSCAGSSRI*LAMSRR
Trigger: CCTTCTTGACATGGCCAGCAAGATCCGGGAGGACCC...AGCACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
3UTR-3UTR CAA 90 bp ATGAACTTCCCATCCCGGGAGTCCAGCTTCTCTAGCCTCTGCTCCCGTTCCTCATCCTTAGCATGCCTCTaGAGGATGTTCAGTCTCTCC +
Preference number: 3 (lower is better)
Translates to: MNFPSRESSFSSLCSRSSSLACL*RMFSLS
Trigger: GGAGAGACTGAACATCCTCAAGAGGCATGCTAAGGA...TGAGGAACGGGAGCAGAGGCTAGAGAAGCTGGACTCCCGGGATGGGAAGTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
3UTR GCA 72 bp CACATGCTCACCTCCCTGCACTGTGCTCATCCTCGCTaGTGGAACGATCACTACTCGAGCTTCTGTGCTTAT +
Preference number: 3 (lower is better)
Translates to: HMLTSLHCAHPR*WNDHYSSFCAY
Trigger: ATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGTGCAGGGAGGTGAGCATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000622665.1
ENST00000631509.1
ENST00000632717.1
3UTR-3UTR CAA 90 bp GACCCTGCTTCCCTGGTGCTCTTCTTGCTGGCATGTCTTGGGGGTGAGTGGGAGTTGAACACTGGTGGTTaGACATCTGTGAAAGAAGTC +
Preference number: 3 (lower is better)
Translates to: DPASLVLFLLACLGGEWELNTGG*TSVKEV
Trigger: GACTTCTTTCACAGATGTCAAACCACCAGTGTTCAA...CTCCCACTCACCCCCAAGACATGCCAGCAAGAAGAGCACCAGGGAAGCAGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
3UTR-3UTR CAA 90 bp TGTGCAGTTTGCTGGGTCTTGGGGACCGTGACCTTCTGCCCAGGGATCGAGACCAAACAGGGGAGGAATTaGCCATCTTCTTCTGTGATA +
Preference number: 3 (lower is better)
Translates to: CAVCWVLGTVTFCPGIETKQGRN*PSSSVI
Trigger: TATCACAGAAGAAGATGGCAAATTCCTCCCCTGTTT...GGTCTCGATCCCTGGGCAGAAGGTCACGGTCCCCAAGACCCAGCAAACTGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619462.4
ENST00000631509.1
ENST00000633854.1
3UTR TCA 72 bp GATCTTGCTGGCCATGTCAAGAAGGGAATTGGCACCTaGTGGGGCAAAGATAGAGCCTGGGAGAAGTCCTGT +
Preference number: 3 (lower is better)
Translates to: DLAGHVKKGIGT*WGKDRAWEKSC
Trigger: ACAGGACTTCTCCCAGGCTCTATCTTTGCCCCATCAGGTGCCAATTCCCTTCTTGACATGGCCAGCAAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
3UTR GCA 72 bp CAGAGTGGCACAAGCACTCCCACCGAGATGGTCCAGTaGCCACCCGTTAAAGAGTCAAAACCCAAAGTTACT +
Preference number: 3 (lower is better)
Translates to: QSGTSTPTEMVQ*PPVKESKPKVT
Trigger: AGTAACTTTGGGTTTTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGCCACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
3UTR CCA 72 bp ATGCTCACCTCCCTGCACTGTGCTCATCCTCGCTGCTaGAACGATCACTACTCGAGCTTCTGTGCTTATGTT +
Preference number: 3 (lower is better)
Translates to: MLTSLHCAHPRC*NDHYSSFCAYV
Trigger: AACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGTGCAGGGAGGTGAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000622665.1
ENST00000631509.1
ENST00000632717.1
3UTR-3UTR CAA 90 bp GGTCAGAGTTCCGGACCTGTAAGCCATATCCAGGGACTTTGGACAAAACAGGGGATGTCAAGAAGGGAATaGGCACCTGATGGGGCAAAG +
Preference number: 3 (lower is better)
Translates to: GQSSGPVSHIQGLWTKQGMSRRE*APDGAK
Trigger: CTTTGCCCCATCAGGTGCCAATTCCCTTCTTGACAT...CCCCTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCCGGAACTCTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
3UTR-3UTR CAA 90 bp ACTGTGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGATGTCAAGAAGGGAATaGGCACCTGATGGGGCAAAG +
Preference number: 3 (lower is better)
Translates to: TVLILAAGTITTRASVLMMSRRE*APDGAK
Trigger: CTTTGCCCCATCAGGTGCCAATTCCCTTCTTGACAT...CATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
3UTR-3UTR CAA 90 bp CTGCAGAGAGTTTTCTGGTGTATCCGGGAGCATGTCGCCTTTGGTAGACCTCTTATGTCAAGAAGGGAATaGGCACCTGATGGGGCAAAG +
Preference number: 3 (lower is better)
Translates to: LQRVFWCIREHVAFGRPLMSRRE*APDGAK
Trigger: CTTTGCCCCATCAGGTGCCAATTCCCTTCTTGACAT...AAGAGGTCTACCAAAGGCGACATGCTCCCGGATACACCAGAAAACTCTCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
3UTR-3UTR CAA 90 bp CTGCAGAGAGTTTTCTGGTGTATCCGGGAGCATGTCGCCTTTGGTAGACCTCTTCCATATCCAGGGACTTaGGACAAAACAGGGGAGGAA +
Preference number: 3 (lower is better)
Translates to: LQRVFWCIREHVAFGRPLPYPGT*DKTGEE
Trigger: TTCCTCCCCTGTTTTGTCCAAAGTCCCTGGATATGG...AAGAGGTCTACCAAAGGCGACATGCTCCCGGATACACCAGAAAACTCTCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
3UTR TCA 72 bp GACACCAGAGAGGTTTCTGAAGGGTCTGGTGTACGCTaGGGCAGTGAAATAGGTCTGTTGGCACAGGTAAGA +
Preference number: 3 (lower is better)
Translates to: DTREVSEGSGVR*GSEIGLLAQVR
Trigger: TCTTACCTGTGCCAACAGACCTATTTCACTGCCTCAGCGTACACCAGACCCTTCAGAAACCTCTCTGGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR CCA 72 bp GGAACTCTAGCATTAGATGGCAAGCTCTGTGGGCACTaGGCCCATGTTCAAGTGTTCATCACTGAATGCCCA +
Preference number: 3 (lower is better)
Translates to: GTLALDGKLCGH*AHVQVFITECP
Trigger: TGGGCATTCAGTGATGAACACTTGAACATGGGCCCAGTGCCCACAGAGCTTGCCATCTAATGCTAGAGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618122.4
ENST00000631509.1
3UTR-3UTR CAA 90 bp TTCACCTTAGAGTTGTGCAGTTTGCTGGGTCTTGGGGACCGTGACCTTCTGCCCAAACAGGGGAGGAATTaGCCATCTTCTTCTGTGATA +
Preference number: 3 (lower is better)
Translates to: FTLELCSLLGLGDRDLLPKQGRN*PSSSVI
Trigger: TATCACAGAAGAAGATGGCAAATTCCTCCCCTGTTT...GGGCAGAAGGTCACGGTCCCCAAGACCCAGCAAACTGCACAACTCTAAGGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619462.4
ENST00000631509.1
ENST00000633854.1
3UTR-3UTR CAA 90 bp GACCCTGAAGACCCTGGTTACGGTCAGAGTTCCGGACCTGTAAGCCATATCCAGAAACAGGGGAGGAATTaGCCATCTTCTTCTGTGATA +
Preference number: 3 (lower is better)
Translates to: DPEDPGYGQSSGPVSHIQKQGRN*PSSSVI
Trigger: TATCACAGAAGAAGATGGCAAATTCCTCCCCTGTTT...CTGGATATGGCTTACAGGTCCGGAACTCTGACCGTAACCAGGGTCTTCAGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619462.4
ENST00000631509.1
ENST00000633854.1
3UTR CCA 72 bp CAGAGTTCCGGACCTGTAAGCCATATCCAGGGACTTTaGACAAAACAGGGGAGGAATTTGCCATCTTCTTCT +
Preference number: 3 (lower is better)
Translates to: QSSGPVSHIQGL*TKQGRNLPSSS
Trigger: AGAAGAAGATGGCAAATTCCTCCCCTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCCGGAACTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
3UTR-3UTR CAA 90 bp TTGGCACCTGATGGGGCAAAGATAGAGCCTGGGAGAAGTCCTGTTTCAGAAGAGTTGAACACTGGTGGTTaGACATCTGTGAAAGAAGTC +
Preference number: 3 (lower is better)
Translates to: LAPDGAKIEPGRSPVSEELNTGG*TSVKEV
Trigger: GACTTCTTTCACAGATGTCAAACCACCAGTGTTCAA...CTCTTCTGAAACAGGACTTCTCCCAGGCTCTATCTTTGCCCCATCAGGTGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
3UTR-3UTR CAA 90 bp CTCCTCCTAAACCAGCCAGATTCAGAGAGAAAAACGAGCTGGCCTGCCTTATTGTTGAACACTGGTGGTTaGACATCTGTGAAAGAAGTC +
Preference number: 3 (lower is better)
Translates to: LLLNQPDSERKTSWPALLLNTGG*TSVKEV
Trigger: GACTTCTTTCACAGATGTCAAACCACCAGTGTTCAA...CAATAAGGCAGGCCAGCTCGTTTTTCTCTCTGAATCTGGCTGGTTTAGGAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR-3UTR CAA 90 bp CTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGCTTCTTTATGTCAAGAAGGGAATaGGCACCTGATGGGGCAAAG +
Preference number: 3 (lower is better)
Translates to: LLERSLLELLCLCFLCFFMSRRE*APDGAK
Trigger: CTTTGCCCCATCAGGTGCCAATTCCCTTCTTGACAT...AAAGAAGCACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
3UTR TCA 72 bp TCCCACAAAGCAAGTCACACTAGCTCTCAAAGGAAGTaGGCTGTTTCAGGACTCAATGAAGCAGGGTCACTT +
Preference number: 3 (lower is better)
Translates to: SHKASHTSSQRK*AVSGLNEAGSL
Trigger: AAGTGACCCTGCTTCATTGAGTCCTGAAACAGCTCACTTCCTTTGAGAGCTAGTGTGACTTGCTTTGTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
3UTR-3UTR CAA 90 bp ATGTTACATTCTCTAGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCAGCTGGCCTGCCTTATaGTATTACTTGCCATCAAGG +
Preference number: 3 (lower is better)
Translates to: MLHSLGKDRVSSITVPGISWPAL*YYLPSR
Trigger: CCTTGATGGCAAGTAATACAATAAGGCAGGCCAGCT...GATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCTAGAGAATGTAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR-3UTR CAA 90 bp CTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGCTTCTTTTTCATGTCAAGAAGGGAATaGGCACCTGATGGGGCAAAG +
Preference number: 3 (lower is better)
Translates to: LERSLLELLCLCFLCFFFMSRRE*APDGAK
Trigger: CTTTGCCCCATCAGGTGCCAATTCCCTTCTTGACAT...GAAAAAGAAGCACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
3UTR-3UTR CAA 90 bp CGTTTTCGCTCTAATTCCTCTGCAGAGAGTTTTCTGGTGTATCCGGGAGCATGTAAACAGGGGAGGAATTaGCCATCTTCTTCTGTGATA +
Preference number: 3 (lower is better)
Translates to: RFRSNSSAESFLVYPGACKQGRN*PSSSVI
Trigger: TATCACAGAAGAAGATGGCAAATTCCTCCCCTGTTT...ACATGCTCCCGGATACACCAGAAAACTCTCTGCAGAGGAATTAGAGCGAAAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618122.4
ENST00000631509.1
3UTR CCA 72 bp CTCCTAAACCAGCCAGATTCAGAGAGAAAAACGAGCTaGCCTGCCTTATTGTATTACTTGCCATCAAGGTTC +
Preference number: 3 (lower is better)
Translates to: LLNQPDSERKTS*PALLYYLPSRF
Trigger: GAACCTTGATGGCAAGTAATACAATAAGGCAGGCCAGCTCGTTTTTCTCTCTGAATCTGGCTGGTTTAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR CCA 72 bp TTTATAAGGAAAACCAGTGTTCCTCAACATGGGGTGTaGATCTTGGCTCAGAGCTTCTCGAGTCTCCTTTAC +
Preference number: 3 (lower is better)
Translates to: FIRKTSVPQHGV*ILAQSFSSLLY
Trigger: GTAAAGGAGACTCGAGAAGCTCTGAGCCAAGATCCACACCCCATGTTGAGGAACACTGGTTTTCCTTATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
3UTR-3UTR CAA 90 bp AGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAATTTACACTGCCTACATaGGAGACTGCAAGCAGTGGA +
Preference number: 3 (lower is better)
Translates to: RERSGFKHYSAWHHKCSKFTLPT*ETASSG
Trigger: TCCACTGCTTGCAGTCTCCAATGTAGGCAGTGTAAA...TTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR-3UTR CAA 90 bp AGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAAGTGAAATAGGTCTGTaGGCACAGGTAAGAAGGAAG +
Preference number: 3 (lower is better)
Translates to: RERSGFKHYSAWHHKCSKSEIGL*AQVRRK
Trigger: CTTCCTTCTTACCTGTGCCAACAGACCTATTTCACT...TTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR GCA 72 bp AAACCAGCCAGATTCAGAGAGAAAAACGAGCTGGCCTaGCTTATTGTATTACTTGCCATCAAGGTTCAATGT +
Preference number: 3 (lower is better)
Translates to: KPARFREKNELA*LIVLLAIKVQC
Trigger: ACATTGAACCTTGATGGCAAGTAATACAATAAGGCAGGCCAGCTCGTTTTTCTCTCTGAATCTGGCTGGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR CCA 72 bp CAGGACTCAATGAAGCAGGGTCACTTTGAACACTGGTaGTTTGACATCTGTGAAAGAAGTCATTTGAACTCT +
Preference number: 3 (lower is better)
Translates to: QDSMKQGHFEHW*FDICERSHLNS
Trigger: AGAGTTCAAATGACTTCTTTCACAGATGTCAAACCACCAGTGTTCAAAGTGACCCTGCTTCATTGAGTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
3UTR CCA 72 bp TACCTTTACACTGCCTACATTGGAGACTGCAAGCAGTaGAAAAGAATAGATACTCCAGATCTCGTCGATAAA +
Preference number: 3 (lower is better)
Translates to: YLYTAYIGDCKQ*KRIDTPDLVDK
Trigger: TTTATCGACGAGATCTGGAGTATCTATTCTTTTCCACTGCTTGCAGTCTCCAATGTAGGCAGTGTAAAGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR-3UTR CAA 90 bp GAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAACATTGAACACTGGTGGTTaGACATCTGTGAAAGAAGTC +
Preference number: 3 (lower is better)
Translates to: ERSGFKHYSAWHHKCSKTLNTGG*TSVKEV
Trigger: GACTTCTTTCACAGATGTCAAACCACCAGTGTTCAA...TGTTTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR-3UTR CAA 90 bp TATGTTACATTCTCTAGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATTACCCAGTAAAGTCATaGACCAAACAAGGTATTTTC +
Preference number: 3 (lower is better)
Translates to: YVTFSRERSGFKHYSAWHYPVKS*TKQGIF
Trigger: GAAAATACCTTGTTTGGTCAATGACTTTACTGGGTA...ATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCTAGAGAATGTAACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR CCA 72 bp TCTAGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTaGCATCATAAGTGTTCAAAAACAGAAATCCAAATA +
Preference number: 3 (lower is better)
Translates to: SRERSGFKHYSA*HHKCSKTEIQI
Trigger: TATTTGGATTTCTGTTTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR-3UTR CAA 90 bp GCCATGGAGCATATTGGCAATTTGGTTCTGACTCCTAAAATCATTTTACTATACGCCTTATTGTATTACTaGCCATCAAGGTTCAATGTG +
Preference number: 3 (lower is better)
Translates to: AMEHIGNLVLTPKIILLYALLYY*PSRFNV
Trigger: CACATTGAACCTTGATGGCAAGTAATACAATAAGGC...GTATAGTAAAATGATTTTAGGAGTCAGAACCAAATTGCCAATATGCTCCATGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR-3UTR CAA 90 bp GCCATGGAGCATATTGGCAATTTGGTTCTGACTCCTAAAATCATTTTACTATACTACCCAGTAAAGTCATaGACCAAACAAGGTATTTTC +
Preference number: 3 (lower is better)
Translates to: AMEHIGNLVLTPKIILLYYPVKS*TKQGIF
Trigger: GAAAATACCTTGTTTGGTCAATGACTTTACTGGGTA...GTATAGTAAAATGATTTTAGGAGTCAGAACCAAATTGCCAATATGCTCCATGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR GCA 90 bp TGGGGCGCCCCAGCAGGTACTCGTCACGGTTCACCATCCCACCAGGACCCTGGTGGGACCGTGACCTTCTaGCCAGGGATCGAGACCTCC +
Preference number: 4 (lower is better)
Translates to: WGAPAGTRHGSPSHQDPGGTVTF*PGIETS
Trigger: GGAGGTCTCGATCCCTGGGCAGAAGGTCACGGTCCC...ACCAGGGTCCTGGTGGGATGGTGAACCGTGACGAGTACCTGCTGGGGCGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR TCA 90 bp ACCGTGACCTTCTGCCCAGGGATCGAGACCTCCTGTCCCGGGACCCTGCTTCCCGGCATGTCTTGGGGGTaGGTGGGAGGAGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: TVTFCPGIETSCPGTLLPGMSWG*VGGASG
Trigger: TCCAGAAGCTCCTCCCACTCACCCCCAAGACATGCC...GGGAAGCAGGGTCCCGGGACAGGAGGTCTCGATCCCTGGGCAGAAGGTCACGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR TCA 90 bp GGGCGCCCCAGCAGGTACTCGTCACGGTTCACCATCCCACCAGGACCCTGGTACGCTTCATGCGGTGGATaGACTTCCCATCCCGGGAGT +
Preference number: 4 (lower is better)
Translates to: GRPSRYSSRFTIPPGPWYASCGG*TSHPGS
Trigger: ACTCCCGGGATGGGAAGTTCATCCACCGCATGAAGC...GTACCAGGGTCCTGGTGGGATGGTGAACCGTGACGAGTACCTGCTGGGGCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR GCA 90 bp GGGCGCCCCAGCAGGTACTCGTCACGGTTCACCATCCCACCAGGACCCTGGTACCCCTGGTGCTCTTCTTaGTGGCATGTCTTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: GRPSRYSSRFTIPPGPWYPWCSS*WHVLGV
Trigger: CACCCCCAAGACATGCCAGCAAGAAGAGCACCAGGG...GTACCAGGGTCCTGGTGGGATGGTGAACCGTGACGAGTACCTGCTGGGGCGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR GCA 90 bp GCCAGTCGCCACATGCTCACCTCCCTGCACTGTGCTCATCCTCGCTGCTGGAACGGGACCGTGACCTTCTaGCCAGGGATCGAGACCTCC +
Preference number: 4 (lower is better)
Translates to: ASRHMLTSLHCAHPRCWNGTVTF*PGIETS
Trigger: GGAGGTCTCGATCCCTGGGCAGAAGGTCACGGTCCC...GTTCCAGCAGCGAGGATGAGCACAGTGCAGGGAGGTGAGCATGTGGCGACTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618122.4
ENST00000631509.1
CDS-3UTR GCA 90 bp GGGCGCCCCAGCAGGTACTCGTCACGGTTCACCATCCCACCAGGACCCTGGTACCACCTCCCTGCACTGTaGTCATCCTCGCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: GRPSRYSSRFTIPPGPWYHLPAL*SSSLLE
Trigger: TTCCAGCAGCGAGGATGAGCACAGTGCAGGGAGGTG...GTACCAGGGTCCTGGTGGGATGGTGAACCGTGACGAGTACCTGCTGGGGCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000622665.1
ENST00000631509.1
ENST00000632717.1
CDS-3UTR GCA 90 bp GGGCGCCCCAGCAGGTACTCGTCACGGTTCACCATCCCACCAGGACCCTGGTACTTCCGCTCAGCCTCATaGTTCTGCTCGGCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: GRPSRYSSRFTIPPGPWYFRSAS*FCSAFH
Trigger: GTGGAAGGCCGAGCAGAAGCATGAGGCTGAGCGGAA...GTACCAGGGTCCTGGTGGGATGGTGAACCGTGACGAGTACCTGCTGGGGCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000619299.4
ENST00000622665.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR TCA 90 bp TGGGGCGCCCCAGCAGGTACTCGTCACGGTTCACCATCCCACCAGGACCCTGGTTCTCGCAGCTCCCGCTaGAGCTCCTCAATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: WGAPAGTRHGSPSHQDPGSRSSR*SSSIFF
Trigger: GAAGAAGATTGAGGAGCTTCAGCGGGAGCTGCGAGA...ACCAGGGTCCTGGTGGGATGGTGAACCGTGACGAGTACCTGCTGGGGCGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000619299.4
ENST00000622665.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR GCA 90 bp TGGGGCGCCCCAGCAGGTACTCGTCACGGTTCACCATCCCACCAGGACCCTGGTGATCTCCCTGCACTGTaGTCATCCTCGCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: WGAPAGTRHGSPSHQDPGDLPAL*SSSLLE
Trigger: TTCCAGCAGCGAGGATGAGCACAGTGCAGGGAGATC...ACCAGGGTCCTGGTGGGATGGTGAACCGTGACGAGTACCTGCTGGGGCGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
3UTR CAA 72 bp CTCCTGTCCCGGGACCCTGCTTCCCTGGTGCTCTTCTaGCTGGCATGTCTTGGGGGTGAGTGGGAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: LLSRDPASLVLF*LACLGGEWEEL
Trigger: AAGCTCCTCCCACTCACCCCCAAGACATGCCAGCAAGAAGAGCACCAGGGAAGCAGGGTCCCGGGACAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR GCA 90 bp GCTCACCTCCCTGCACTGTGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGGGGACCGTGACCTTCTaGCCAGGGATCGAGACCTCC +
Preference number: 4 (lower is better)
Translates to: AHLPALCSSSLLERSLLEGTVTF*PGIETS
Trigger: GGAGGTCTCGATCCCTGGGCAGAAGGTCACGGTCCC...CTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGTGCAGGGAGGTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618122.4
ENST00000631509.1
CDS-3UTR GCA 90 bp GAAGGGAGGCCAGTCGCCACATGCTCACCTCCCTGCACTGTGCTCATCCTCGCTGGTCCTCCCGGATCTTaGTGGCCATGTCAAGAAGGG +
Preference number: 4 (lower is better)
Translates to: EGRPVATCSPPCTVLILAGPPGS*WPCQEG
Trigger: CCCTTCTTGACATGGCCAGCAAGATCCGGGAGGACC...AGCGAGGATGAGCACAGTGCAGGGAGGTGAGCATGTGGCGACTGGCCTCCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000622665.1
ENST00000631509.1
ENST00000632717.1
CDS-3UTR CCA 90 bp TGGGGCGCCCCAGCAGGTACTCGTCACGGTTCACCATCCCACCAGGACCCTGGTATGGGGTGTGGATCTTaGCTCAGAGCTTCTCGAGTC +
Preference number: 4 (lower is better)
Translates to: WGAPAGTRHGSPSHQDPGMGCGS*LRASRV
Trigger: GACTCGAGAAGCTCTGAGCCAAGATCCACACCCCAT...ACCAGGGTCCTGGTGGGATGGTGAACCGTGACGAGTACCTGCTGGGGCGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR TCA 90 bp GCCAGTCGCCACATGCTCACCTCCCTGCACTGTGCTCATCCTCGCTGCTGGAACTCTCGCAGCTCCCGCTaGAGCTCCTCAATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: ASRHMLTSLHCAHPRCWNSRSSR*SSSIFF
Trigger: GAAGAAGATTGAGGAGCTTCAGCGGGAGCTGCGAGA...GTTCCAGCAGCGAGGATGAGCACAGTGCAGGGAGGTGAGCATGTGGCGACTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622665.1
ENST00000632717.1
CDS-3UTR GCA 90 bp TTTGTCAATGGGGCGCCCCAGCAGGTACTCGTCACGGTTCACCATCCCACCAGGCCCTGGTGCTCTTCTTaGTGGCATGTCTTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: FVNGAPQQVLVTVHHPTRPWCSS*WHVLGV
Trigger: CACCCCCAAGACATGCCAGCAAGAAGAGCACCAGGG...CCTGGTGGGATGGTGAACCGTGACGAGTACCTGCTGGGGCGCCCCATTGACAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR GCA 90 bp TCAATGGGGCGCCCCAGCAGGTACTCGTCACGGTTCACCATCCCACCAGGACCCTGTGCTCATCCTCGCTaGTGGAACGATCACTACTCG +
Preference number: 4 (lower is better)
Translates to: SMGRPSRYSSRFTIPPGPCAHPR*WNDHYS
Trigger: CGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACA...GGGTCCTGGTGGGATGGTGAACCGTGACGAGTACCTGCTGGGGCGCCCCATTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR GCA 90 bp GAATCAACGAGAAGGGAGGCCAGTCGCCACATGCTCACCTCCCTGCACTGTGCTAGGCCAGTCGCCACATaGTCACCTCCCTGCACTGTG +
Preference number: 4 (lower is better)
Translates to: ESTRREASRHMLTSLHCARPVAT*SPPCTV
Trigger: CACAGTGCAGGGAGGTGAGCATGTGGCGACTGGCCT...AGCACAGTGCAGGGAGGTGAGCATGTGGCGACTGGCCTCCCTTCTCGTTGATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000622665.1
ENST00000631509.1
ENST00000632717.1
CDS-3UTR CCA 90 bp TCAATGGGGCGCCCCAGCAGGTACTCGTCACGGTTCACCATCCCACCAGGACCCCCTCAACATGGGGTGTaGATCTTGGCTCAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: SMGRPSRYSSRFTIPPGPPQHGV*ILAQSF
Trigger: GAAGCTCTGAGCCAAGATCCACACCCCATGTTGAGG...GGGTCCTGGTGGGATGGTGAACCGTGACGAGTACCTGCTGGGGCGCCCCATTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR CCA 90 bp GAGAAGGGAGGCCAGTCGCCACATGCTCACCTCCCTGCACTGTGCTCATCCTCGGCTCATCCTCGCTGCTaGAACGATCACTACTCGAGC +
Preference number: 4 (lower is better)
Translates to: EKGGQSPHAHLPALCSSSAHPRC*NDHYSS
Trigger: GCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGC...CGAGGATGAGCACAGTGCAGGGAGGTGAGCATGTGGCGACTGGCCTCCCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000622665.1
ENST00000631509.1
ENST00000632717.1
CDS-3UTR CCA 90 bp ACCGTGACCTTCTGCCCAGGGATCGAGACCTCCTGTCCCGGGACCCTGCTTCCCCTGCAGAGAGTTTTCTaGTGTATCCGGGAGCATGTC +
Preference number: 4 (lower is better)
Translates to: TVTFCPGIETSCPGTLLPLQRVF*CIREHV
Trigger: GACATGCTCCCGGATACACCAGAAAACTCTCTGCAG...GGGAAGCAGGGTCCCGGGACAGGAGGTCTCGATCCCTGGGCAGAAGGTCACGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR CCA 90 bp GGGCGCCCCAGCAGGTACTCGTCACGGTTCACCATCCCACCAGGACCCTGGTACCTGCAGAGAGTTTTCTaGTGTATCCGGGAGCATGTC +
Preference number: 4 (lower is better)
Translates to: GRPSRYSSRFTIPPGPWYLQRVF*CIREHV
Trigger: GACATGCTCCCGGATACACCAGAAAACTCTCTGCAG...GTACCAGGGTCCTGGTGGGATGGTGAACCGTGACGAGTACCTGCTGGGGCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR CCA 90 bp TGGGGCGCCCCAGCAGGTACTCGTCACGGTTCACCATCCCACCAGGACCCTGGTTCTGATGATGAAGAGTaGGTCCTCCCGGATCTTGCT +
Preference number: 4 (lower is better)
Translates to: WGAPAGTRHGSPSHQDPGSDDEE*VLPDLA
Trigger: AGCAAGATCCGGGAGGACCCACTCTTCATCATCAGA...ACCAGGGTCCTGGTGGGATGGTGAACCGTGACGAGTACCTGCTGGGGCGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000622665.1
ENST00000632717.1
CDS-3UTR GCA 90 bp TGTGCAGTTTGCTGGGTCTTGGGGACCGTGACCTTCTGCCCAGGGATCGAGACCCCATGCCCTCTCTTTTaGTCTGCTGTCAGAGGACCC +
Preference number: 4 (lower is better)
Translates to: CAVCWVLGTVTFCPGIETPCPLF*SAVRGP
Trigger: GGGTCCTCTGACAGCAGAGCAAAAGAGAGGGCATGG...GGTCTCGATCCCTGGGCAGAAGGTCACGGTCCCCAAGACCCAGCAAACTGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR GCA 90 bp GAAGAGTGGGTCCTCCCGGATCTTGCTGGCCATGTCAAGAAGGGAATTGGCACCCCTGTCCCGGGACCCTaGTTCCCTGGTGCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: EEWVLPDLAGHVKKGIGTPVPGP*FPGALL
Trigger: AAGAAGAGCACCAGGGAAGCAGGGTCCCGGGACAGG...GGTGCCAATTCCCTTCTTGACATGGCCAGCAAGATCCGGGAGGACCCACTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR GCA 90 bp CCCTGCACTGTGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGAGGCCAGTCGCCACATaGTCACCTCCCTGCACTGTG +
Preference number: 4 (lower is better)
Translates to: PCTVLILAAGTITTRASVRPVAT*SPPCTV
Trigger: CACAGTGCAGGGAGGTGAGCATGTGGCGACTGGCCT...CACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGTGCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000622665.1
ENST00000631509.1
ENST00000632717.1
CDS-3UTR CCA 90 bp TGGGGCGCCCCAGCAGGTACTCGTCACGGTTCACCATCCCACCAGGACCCTGGTCTTCTGGATCTGGAATaGTTCTTCATCCCATGCCCT +
Preference number: 4 (lower is better)
Translates to: WGAPAGTRHGSPSHQDPGLLDLE*FFIPCP
Trigger: AGGGCATGGGATGAAGAACCATTCCAGATCCAGAAG...ACCAGGGTCCTGGTGGGATGGTGAACCGTGACGAGTACCTGCTGGGGCGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR CCA 90 bp GGGCGCCCCAGCAGGTACTCGTCACGGTTCACCATCCCACCAGGACCCTGGTACCTTCTGGATCTGGAATaGTTCTTCATCCCATGCCCT +
Preference number: 4 (lower is better)
Translates to: GRPSRYSSRFTIPPGPWYLLDLE*FFIPCP
Trigger: AGGGCATGGGATGAAGAACCATTCCAGATCCAGAAG...GTACCAGGGTCCTGGTGGGATGGTGAACCGTGACGAGTACCTGCTGGGGCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR CCA 90 bp ACCGTGACCTTCTGCCCAGGGATCGAGACCTCCTGTCCCGGGACCCTGCTTCCCAGTGGGAGGAGCTTCTaGATCTGGAATGGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: TVTFCPGIETSCPGTLLPSGRSF*IWNGSS
Trigger: TGAAGAACCATTCCAGATCCAGAAGCTCCTCCCACT...GGGAAGCAGGGTCCCGGGACAGGAGGTCTCGATCCCTGGGCAGAAGGTCACGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR CCA 90 bp GCCAGTCGCCACATGCTCACCTCCCTGCACTGTGCTCATCCTCGCTGCTGGAACCCTCAACATGGGGTGTaGATCTTGGCTCAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: ASRHMLTSLHCAHPRCWNPQHGV*ILAQSF
Trigger: GAAGCTCTGAGCCAAGATCCACACCCCATGTTGAGG...GTTCCAGCAGCGAGGATGAGCACAGTGCAGGGAGGTGAGCATGTGGCGACTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000622665.1
ENST00000631509.1
ENST00000632717.1
CDS-3UTR CCA 90 bp TCAATGGGGCGCCCCAGCAGGTACTCGTCACGGTTCACCATCCCACCAGGACCCATCCCACCAGGACCCTaGTACATCCAGTCCAACTTT +
Preference number: 4 (lower is better)
Translates to: SMGRPSRYSSRFTIPPGPIPPGP*YIQSNF
Trigger: AAAGTTGGACTGGATGTACCAGGGTCCTGGTGGGAT...GGGTCCTGGTGGGATGGTGAACCGTGACGAGTACCTGCTGGGGCGCCCCATTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR CCA 90 bp TGGGGCGCCCCAGCAGGTACTCGTCACGGTTCACCATCCCACCAGGACCCTGGTGGCAAAGATAGAGCCTaGGAGAAGTCCTGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: WGAPAGTRHGSPSHQDPGGKDRA*EKSCFR
Trigger: TCTGAAACAGGACTTCTCCCAGGCTCTATCTTTGCC...ACCAGGGTCCTGGTGGGATGGTGAACCGTGACGAGTACCTGCTGGGGCGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR CCA 90 bp GGGCGCCCCAGCAGGTACTCGTCACGGTTCACCATCCCACCAGGACCCTGGTACTGTCAAGAAGGGAATTaGCACCTGATGGGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: GRPSRYSSRFTIPPGPWYCQEGN*HLMGQR
Trigger: TCTTTGCCCCATCAGGTGCCAATTCCCTTCTTGACA...GTACCAGGGTCCTGGTGGGATGGTGAACCGTGACGAGTACCTGCTGGGGCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR CCA 90 bp AGGGAGGCCAGTCGCCACATGCTCACCTCCCTGCACTGTGCTCATCCTCGCTGCCTCACTACGCGGATCTaGAAGATTTCGGGAGGATCA +
Preference number: 4 (lower is better)
Translates to: REASRHMLTSLHCAHPRCLTTRI*KISGGS
Trigger: TGATCCTCCCGAAATCTTCCAGATCCGCGTAGTGAG...GCAGCGAGGATGAGCACAGTGCAGGGAGGTGAGCATGTGGCGACTGGCCTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622665.1
ENST00000632717.1
CDS-3UTR TCA 90 bp GGGTCCTCCCGGATCTTGCTGGCCATGTCAAGAAGGGAATTGGCACCTGATGGGTCTCGCAGCTCCCGCTaGAGCTCCTCAATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: GSSRILLAMSRRELAPDGSRSSR*SSSIFF
Trigger: GAAGAAGATTGAGGAGCTTCAGCGGGAGCTGCGAGA...CCCATCAGGTGCCAATTCCCTTCTTGACATGGCCAGCAAGATCCGGGAGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000619299.4
ENST00000622665.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR TCA 90 bp CCAGCAGGTACTCGTCACGGTTCACCATCCCACCAGGACCCTGGTACATCCAGTTCTCGCAGCTCCCGCTaGAGCTCCTCAATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: PAGTRHGSPSHQDPGTSSSRSSR*SSSIFF
Trigger: GAAGAAGATTGAGGAGCTTCAGCGGGAGCTGCGAGA...ACTGGATGTACCAGGGTCCTGGTGGGATGGTGAACCGTGACGAGTACCTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000619299.4
ENST00000622665.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR TCA 90 bp GTGGCACAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAACTCGGTCGCGCTTTGTaGCGTTGGCGTTACTTGCAG +
Preference number: 4 (lower is better)
Translates to: VAQALPPRWSSAHPLKSQLGRAL*RWRYLQ
Trigger: CTGCAAGTAACGCCAACGTCACAAAGCGCGACCGAG...TTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614868.2
CDS-3UTR GCA 90 bp TCAATGGGGCGCCCCAGCAGGTACTCGTCACGGTTCACCATCCCACCAGGACCCTGGTTCTTCATCCCATaGCCTCTCTTTTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SMGRPSRYSSRFTIPPGPWFFIP*PLFCSA
Trigger: AGCAGAGCAAAAGAGAGGGCATGGGATGAAGAACCA...GGGTCCTGGTGGGATGGTGAACCGTGACGAGTACCTGCTGGGGCGCCCCATTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR GCA 90 bp GTGGCACAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAACCCTGGTGCTCTTCTTaGTGGCATGTCTTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: VAQALPPRWSSAHPLKSQPWCSS*WHVLGV
Trigger: CACCCCCAAGACATGCCAGCAAGAAGAGCACCAGGG...TTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
CDS-3UTR GCA 90 bp GCACAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAAACCCTGTCCCGGGACCCTaGTTCCCTGGTGCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: AQALPPRWSSAHPLKSQNPVPGP*FPGALL
Trigger: AAGAAGAGCACCAGGGAAGCAGGGTCCCGGGACAGG...GTTTTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
CDS-3UTR GCA 90 bp CTCCTGTTCACCTTAGAGTTGTGCAGTTTGCTGGGTCTTGGGGACCGTGACCTTGGGACCGTGACCTTCTaGCCAGGGATCGAGACCTCC +
Preference number: 4 (lower is better)
Translates to: LLFTLELCSLLGLGDRDLGTVTF*PGIETS
Trigger: GGAGGTCTCGATCCCTGGGCAGAAGGTCACGGTCCC...AAGGTCACGGTCCCCAAGACCCAGCAAACTGCACAACTCTAAGGTGAACAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR GCA 90 bp GAAGAGTGGGTCCTCCCGGATCTTGCTGGCCATGTCAAGAAGGGAATTGGCACCGGTCCTCCCGGATCTTaGTGGCCATGTCAAGAAGGG +
Preference number: 4 (lower is better)
Translates to: EEWVLPDLAGHVKKGIGTGPPGS*WPCQEG
Trigger: CCCTTCTTGACATGGCCAGCAAGATCCGGGAGGACC...GGTGCCAATTCCCTTCTTGACATGGCCAGCAAGATCCGGGAGGACCCACTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR GCA 90 bp TGTGCAGTTTGCTGGGTCTTGGGGACCGTGACCTTCTGCCCAGGGATCGAGACCTGTGCTCATCCTCGCTaGTGGAACGATCACTACTCG +
Preference number: 4 (lower is better)
Translates to: CAVCWVLGTVTFCPGIETCAHPR*WNDHYS
Trigger: CGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACA...GGTCTCGATCCCTGGGCAGAAGGTCACGGTCCCCAAGACCCAGCAAACTGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR GCA 90 bp GTGGCACAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAATTCCGCTCAGCCTCATaGTTCTGCTCGGCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: VAQALPPRWSSAHPLKSQFRSAS*FCSAFH
Trigger: GTGGAAGGCCGAGCAGAAGCATGAGGCTGAGCGGAA...TTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CCA 90 bp ACGAGAAGGGAGGCCAGTCGCCACATGCTCACCTCCCTGCACTGTGCTCATCCTATGGGGTGTGGATCTTaGCTCAGAGCTTCTCGAGTC +
Preference number: 4 (lower is better)
Translates to: TRREASRHMLTSLHCAHPMGCGS*LRASRV
Trigger: GACTCGAGAAGCTCTGAGCCAAGATCCACACCCCAT...AGGATGAGCACAGTGCAGGGAGGTGAGCATGTGGCGACTGGCCTCCCTTCTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000622665.1
ENST00000631509.1
ENST00000632717.1
CDS-3UTR CCA 90 bp GGGTCCTCCCGGATCTTGCTGGCCATGTCAAGAAGGGAATTGGCACCTGATGGGAGATGGCAAGCTCTGTaGGCACTGGGCCCATGTTCA +
Preference number: 4 (lower is better)
Translates to: GSSRILLAMSRRELAPDGRWQAL*ALGPCS
Trigger: TGAACATGGGCCCAGTGCCCACAGAGCTTGCCATCT...CCCATCAGGTGCCAATTCCCTTCTTGACATGGCCAGCAAGATCCGGGAGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618122.4
ENST00000631509.1
CDS-3UTR CCA 90 bp GTGGCACAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAACCGTGTTCGCCAGGATaGTCTCGATCTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: VAQALPPRWSSAHPLKSQPCSPG*SRSPDL
Trigger: GAGGTCAGGAGATCGAGACCATCCTGGCGAACACGG...TTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR TCA 90 bp ATGCGGTGGATGAACTTCCCATCCCGGGAGTCCAGCTTCTCTAGCCTCTGCTCCAAGGGAATTGGCACCTaGTGGGGCAAAGATAGAGCC +
Preference number: 4 (lower is better)
Translates to: MRWMNFPSRESSFSSLCSKGIGT*WGKDRA
Trigger: GGCTCTATCTTTGCCCCATCAGGTGCCAATTCCCTT...GGAGCAGAGGCTAGAGAAGCTGGACTCCCGGGATGGGAAGTTCATCCACCGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR TCA 90 bp CTCCCGTTCCTCATCCTTAGCATGCCTCTTGAGGATGTTCAGTCTCTCCTCCTCCTTTCTCCACATTCCTaGGGGTCTGCGGGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: LPFLILSMPLEDVQSLLLLSPHS*GSAGAS
Trigger: GCTGGCACCCGCAGACCCTCAGGAATGTGGAGAAAG...GAGGAGGAGAGACTGAACATCCTCAAGAGGCATGCTAAGGATGAGGAACGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR TCA 90 bp GGCAAAGATAGAGCCTGGGAGAAGTCCTGTTTCAGAAGAGCAGCCTGCCTCCTTCTTTCTCCACATTCCTaGGGGTCTGCGGGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: GKDRAWEKSCFRRAACLLLSPHS*GSAGAS
Trigger: GCTGGCACCCGCAGACCCTCAGGAATGTGGAGAAAG...AAGGAGGCAGGCTGCTCTTCTGAAACAGGACTTCTCCCAGGCTCTATCTTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000619299.4
ENST00000622665.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR TCA 90 bp GTGGCACAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAATCTCGCAGCTCCCGCTaGAGCTCCTCAATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: VAQALPPRWSSAHPLKSQSRSSR*SSSIFF
Trigger: GAAGAAGATTGAGGAGCTTCAGCGGGAGCTGCGAGA...TTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
CDS-3UTR TCA 90 bp CAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAAACCCAGCTTCATGCGGTGGATaGACTTCCCATCCCGGGAGT +
Preference number: 4 (lower is better)
Translates to: QALPPRWSSAHPLKSQNPASCGG*TSHPGS
Trigger: ACTCCCGGGATGGGAAGTTCATCCACCGCATGAAGC...TGGGTTTTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
CDS-3UTR TCA 90 bp GTGGCACAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAACACCAGAGAGGTTTCTaGAGGGTCTGGTGTACGCTG +
Preference number: 4 (lower is better)
Translates to: VAQALPPRWSSAHPLKSQHQRGF*RVWCTL
Trigger: CAGCGTACACCAGACCCTTCAGAAACCTCTCTGGTG...TTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR TCA 90 bp GCTCACCTCCCTGCACTGTGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGATTTCCAAGATGACTTaGCGGCCCCAACATCCTCCG +
Preference number: 4 (lower is better)
Translates to: AHLPALCSSSLLERSLLEISKMT*RPQHPP
Trigger: CGGAGGATGTTGGGGCCGTCAAGTCATCTTGGAAAT...CTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGTGCAGGGAGGTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622665.1
ENST00000632717.1
CDS-3UTR GCA 90 bp GTGGCACAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAACCCTGCTTCCCTGGTaGTCTTCTTGCTGGCATGTC +
Preference number: 4 (lower is better)
Translates to: VAQALPPRWSSAHPLKSQTLLPW*SSCWHV
Trigger: GACATGCCAGCAAGAAGAGCACCAGGGAAGCAGGGT...TTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
CDS-3UTR GCA 90 bp CTCCTGTTCACCTTAGAGTTGTGCAGTTTGCTGGGTCTTGGGGACCGTGACCTTCCTGTCCCGGGACCCTaGTTCCCTGGTGCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LLFTLELCSLLGLGDRDLPVPGP*FPGALL
Trigger: AAGAAGAGCACCAGGGAAGCAGGGTCCCGGGACAGG...AAGGTCACGGTCCCCAAGACCCAGCAAACTGCACAACTCTAAGGTGAACAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR GCA 90 bp GCCACATGCTCACCTCCCTGCACTGTGCTCATCCTCGCTGCTGGAACGATCACTTGTGCTCATCCTCGCTaGTGGAACGATCACTACTCG +
Preference number: 4 (lower is better)
Translates to: ATCSPPCTVLILAAGTITCAHPR*WNDHYS
Trigger: CGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACA...AGTGATCGTTCCAGCAGCGAGGATGAGCACAGTGCAGGGAGGTGAGCATGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000622665.1
ENST00000631509.1
ENST00000632717.1
CDS-3UTR GCA 90 bp ACATGCTCACCTCCCTGCACTGTGCTCATCCTCGCTGCTGGAACGATCACTACTCACCTCCCTGCACTGTaGTCATCCTCGCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: TCSPPCTVLILAAGTITTHLPAL*SSSLLE
Trigger: TTCCAGCAGCGAGGATGAGCACAGTGCAGGGAGGTG...AGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGTGCAGGGAGGTGAGCATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000622665.1
ENST00000631509.1
ENST00000632717.1
CDS-3UTR GCA 90 bp CTTCCTGATGATGAAGAGTGGGTCCTCCCGGATCTTGCTGGCCATGTCAAGAAGAGGCCAGTCGCCACATaGTCACCTCCCTGCACTGTG +
Preference number: 4 (lower is better)
Translates to: LPDDEEWVLPDLAGHVKKRPVAT*SPPCTV
Trigger: CACAGTGCAGGGAGGTGAGCATGTGGCGACTGGCCT...CTTCTTGACATGGCCAGCAAGATCCGGGAGGACCCACTCTTCATCATCAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618122.4
ENST00000631509.1
CDS-3UTR GCA 90 bp GAAGGGAGGCCAGTCGCCACATGCTCACCTCCCTGCACTGTGCTCATCCTCGCTTTCACCTTAGAGTTGTaGAGTTTGCTGGGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: EGRPVATCSPPCTVLILAFTLEL*SLLGLG
Trigger: CCCAAGACCCAGCAAACTGCACAACTCTAAGGTGAA...AGCGAGGATGAGCACAGTGCAGGGAGGTGAGCATGTGGCGACTGGCCTCCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618122.4
ENST00000631509.1
CDS-3UTR GCA 90 bp GCACAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAAACCCAGGAGCCGTCAACTaGCAGTTTCACCACCGCTCT +
Preference number: 4 (lower is better)
Translates to: AQALPPRWSSAHPLKSQNPGAVN*QFHHRS
Trigger: AGAGCGGTGGTGAAACTGGCAGTTGACGGCTCCTGG...GTTTTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR GCA 90 bp GTGGCACAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAGATCTCCCTGCACTGTaGTCATCCTCGCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: VAQALPPRWSSAHPLKSQDLPAL*SSSLLE
Trigger: TTCCAGCAGCGAGGATGAGCACAGTGCAGGGAGATC...TTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
CDS-3UTR GCA 90 bp GCACAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAAACACAATCTCGGCTCACTaGAAGCTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: AQALPPRWSSAHPLKSQNTISAH*KLRLLG
Trigger: ACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGATTGT...GTTTTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR GCA 90 bp GCACAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAAACATCGCCCAGCTAATGTaGGGGTCAAGAGGGCCTAGG +
Preference number: 4 (lower is better)
Translates to: AQALPPRWSSAHPLKSQNIAQLM*GSRGPR
Trigger: CCTAGGCCCTCTTGACCCGCACATTAGCTGGGCGAT...GTTTTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CCA 90 bp GGGTCCTCCCGGATCTTGCTGGCCATGTCAAGAAGGGAATTGGCACCTGATGGGATGGGGTGTGGATCTTaGCTCAGAGCTTCTCGAGTC +
Preference number: 4 (lower is better)
Translates to: GSSRILLAMSRRELAPDGMGCGS*LRASRV
Trigger: GACTCGAGAAGCTCTGAGCCAAGATCCACACCCCAT...CCCATCAGGTGCCAATTCCCTTCTTGACATGGCCAGCAAGATCCGGGAGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR CCA 90 bp ATGCGGTGGATGAACTTCCCATCCCGGGAGTCCAGCTTCTCTAGCCTCTGCTCCCCTCAACATGGGGTGTaGATCTTGGCTCAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: MRWMNFPSRESSFSSLCSPQHGV*ILAQSF
Trigger: GAAGCTCTGAGCCAAGATCCACACCCCATGTTGAGG...GGAGCAGAGGCTAGAGAAGCTGGACTCCCGGGATGGGAAGTTCATCCACCGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CCA 90 bp GAAGGGAGGCCAGTCGCCACATGCTCACCTCCCTGCACTGTGCTCATCCTCGCTAAACATATTTGTCAATaGGGCGCCCCAGCAGGTACT +
Preference number: 4 (lower is better)
Translates to: EGRPVATCSPPCTVLILAKHICQ*GAPAGT
Trigger: AGTACCTGCTGGGGCGCCCCATTGACAAATATGTTT...AGCGAGGATGAGCACAGTGCAGGGAGGTGAGCATGTGGCGACTGGCCTCCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000622665.1
ENST00000631509.1
ENST00000632717.1
CDS-3UTR CCA 90 bp GCCACATGCTCACCTCCCTGCACTGTGCTCATCCTCGCTGCTGGAACGATCACTCCTGATGATGAAGAGTaGGTCCTCCCGGATCTTGCT +
Preference number: 4 (lower is better)
Translates to: ATCSPPCTVLILAAGTITPDDEE*VLPDLA
Trigger: AGCAAGATCCGGGAGGACCCACTCTTCATCATCAGG...AGTGATCGTTCCAGCAGCGAGGATGAGCACAGTGCAGGGAGGTGAGCATGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618122.4
ENST00000631509.1
CDS-3UTR CCA 90 bp CTGGTGCTCTTCTTGCTGGCATGTCTTGGGGGTGAGTGGGAGGAGCTTCTGGATGCTCATCCTCGCTGCTaGAACGATCACTACTCGAGC +
Preference number: 4 (lower is better)
Translates to: LVLFLLACLGGEWEELLDAHPRC*NDHYSS
Trigger: GCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGC...ATCCAGAAGCTCCTCCCACTCACCCCCAAGACATGCCAGCAAGAAGAGCACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR CCA 90 bp CCCTGCACTGTGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGAGTTGTGCAGTTTGCTaGGTCTTGGGGACCGTGACC +
Preference number: 4 (lower is better)
Translates to: PCTVLILAAGTITTRASVSCAVC*VLGTVT
Trigger: GGTCACGGTCCCCAAGACCCAGCAAACTGCACAACT...CACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGTGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR CCA 90 bp GGGTCCTCCCGGATCTTGCTGGCCATGTCAAGAAGGGAATTGGCACCTGATGGGGATGGGCTCCTAGTTTaGCCTGTCTCTCTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: GSSRILLAMSRRELAPDGDGLLV*PVSLLF
Trigger: GAACAGGAGAGAGACAGGCCAAACTAGGAGCCCATC...CCCATCAGGTGCCAATTCCCTTCTTGACATGGCCAGCAAGATCCGGGAGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR CCA 90 bp CTCCCGTTCCTCATCCTTAGCATGCCTCTTGAGGATGTTCAGTCTCTCCTCCTCGCACTCCCACCGAGATaGTCCAGTGCCCACCCGTTA +
Preference number: 4 (lower is better)
Translates to: LPFLILSMPLEDVQSLLLALPPR*SSAHPL
Trigger: TAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGC...GAGGAGGAGAGACTGAACATCCTCAAGAGGCATGCTAAGGATGAGGAACGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR TCA 90 bp GTGGGAGGAGCTTCTGGATCTGGAATGGTTCTTCATCCCATGCCCTCTCTTTTGGGCATGTCTTGGGGGTaGGTGGGAGGAGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: VGGASGSGMVLHPMPSLLGMSWG*VGGASG
Trigger: TCCAGAAGCTCCTCCCACTCACCCCCAAGACATGCC...CAAAAGAGAGGGCATGGGATGAAGAACCATTCCAGATCCAGAAGCTCCTCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR TCA 90 bp CACTGTGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATCTTTCTCCACATTCCTaGGGGTCTGCGGGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: HCAHPRCWNDHYSSFCAYLSPHS*GSAGAS
Trigger: GCTGGCACCCGCAGACCCTCAGGAATGTGGAGAAAG...ATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000619299.4
ENST00000622665.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR TCA 90 bp GCACAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAAACGGGTCTGGTGTACGCTaGGGCAGTGAAATAGGTCTG +
Preference number: 4 (lower is better)
Translates to: AQALPPRWSSAHPLKSQNGSGVR*GSEIGL
Trigger: CAGACCTATTTCACTGCCTCAGCGTACACCAGACCC...GTTTTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
CDS-3UTR TCA 90 bp GAGTCAAAACCCAAAGTTACTGAGTGTCCCACAAAGCAAGTCACACTAGCTCTCGGCGTCGCGGAACGATaGCGTACAGGGCTCGGTCGC +
Preference number: 4 (lower is better)
Translates to: ESKPKVTECPTKQVTLALGVAER*RTGLGR
Trigger: GCGACCGAGCCCTGTACGTCATCGTTCCGCGACGCC...GAGAGCTAGTGTGACTTGCTTTGTGGGACACTCAGTAACTTTGGGTTTTGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614868.2
CDS-3UTR GCA 90 bp GCACAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAAACCCATGCCCTCTCTTTTaGTCTGCTGTCAGAGGACCC +
Preference number: 4 (lower is better)
Translates to: AQALPPRWSSAHPLKSQNPCPLF*SAVRGP
Trigger: GGGTCCTCTGACAGCAGAGCAAAAGAGAGGGCATGG...GTTTTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
CDS-3UTR GCA 90 bp CTGCAGAGAGTTTTCTGGTGTATCCGGGAGCATGTCGCCTTTGGTAGACCTCTTCCTGTCCCGGGACCCTaGTTCCCTGGTGCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LQRVFWCIREHVAFGRPLPVPGP*FPGALL
Trigger: AAGAAGAGCACCAGGGAAGCAGGGTCCCGGGACAGG...AAGAGGTCTACCAAAGGCGACATGCTCCCGGATACACCAGAAAACTCTCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR GCA 90 bp ACTCTAGCATTAGATGGCAAGCTCTGTGGGCACTGGGCCCATGTTCAAGTGTTCCCTGTCCCGGGACCCTaGTTCCCTGGTGCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: TLALDGKLCGHWAHVQVFPVPGP*FPGALL
Trigger: AAGAAGAGCACCAGGGAAGCAGGGTCCCGGGACAGG...GAACACTTGAACATGGGCCCAGTGCCCACAGAGCTTGCCATCTAATGCTAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619462.4
ENST00000631509.1
ENST00000633854.1
CDS-3UTR GCA 90 bp ACTGTGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGCCTGTCCCGGGACCCTaGTTCCCTGGTGCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: TVLILAAGTITTRASVLMPVPGP*FPGALL
Trigger: AAGAAGAGCACCAGGGAAGCAGGGTCCCGGGACAGG...CATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR GCA 90 bp AGTGGGAGGAGCTTCTGGATCTGGAATGGTTCTTCATCCCATGCCCTCTCTTTTGGGACCGTGACCTTCTaGCCAGGGATCGAGACCTCC +
Preference number: 4 (lower is better)
Translates to: SGRSFWIWNGSSSHALSFGTVTF*PGIETS
Trigger: GGAGGTCTCGATCCCTGGGCAGAAGGTCACGGTCCC...AAAAGAGAGGGCATGGGATGAAGAACCATTCCAGATCCAGAAGCTCCTCCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR GCA 90 bp GGCAAAGATAGAGCCTGGGAGAAGTCCTGTTTCAGAAGAGCAGCCTGCCTCCTTGGTCCTCCCGGATCTTaGTGGCCATGTCAAGAAGGG +
Preference number: 4 (lower is better)
Translates to: GKDRAWEKSCFRRAACLLGPPGS*WPCQEG
Trigger: CCCTTCTTGACATGGCCAGCAAGATCCGGGAGGACC...AAGGAGGCAGGCTGCTCTTCTGAAACAGGACTTCTCCCAGGCTCTATCTTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR GCA 90 bp CTCCTGTTCACCTTAGAGTTGTGCAGTTTGCTGGGTCTTGGGGACCGTGACCTTGGTCCTCCCGGATCTTaGTGGCCATGTCAAGAAGGG +
Preference number: 4 (lower is better)
Translates to: LLFTLELCSLLGLGDRDLGPPGS*WPCQEG
Trigger: CCCTTCTTGACATGGCCAGCAAGATCCGGGAGGACC...AAGGTCACGGTCCCCAAGACCCAGCAAACTGCACAACTCTAAGGTGAACAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR GCA 90 bp CCCTGCACTGTGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGTGTGCTCATCCTCGCTaGTGGAACGATCACTACTCG +
Preference number: 4 (lower is better)
Translates to: PCTVLILAAGTITTRASVCAHPR*WNDHYS
Trigger: CGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACA...CACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGTGCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR GCA 90 bp CTCCTGTTCACCTTAGAGTTGTGCAGTTTGCTGGGTCTTGGGGACCGTGACCTTCACCTCCCTGCACTGTaGTCATCCTCGCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: LLFTLELCSLLGLGDRDLHLPAL*SSSLLE
Trigger: TTCCAGCAGCGAGGATGAGCACAGTGCAGGGAGGTG...AAGGTCACGGTCCCCAAGACCCAGCAAACTGCACAACTCTAAGGTGAACAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618122.4
ENST00000631509.1
CDS-3UTR GCA 90 bp CCTGCACTGTGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTCAGCCTCATGCTTCTaGTCGGCCTTCCACACTTTC +
Preference number: 4 (lower is better)
Translates to: PALCSSSLLERSLLELLCSASCF*SAFHTF
Trigger: GAAAGTGTGGAAGGCCGAGCAGAAGCATGAGGCTGA...GCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGTGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000619299.4
ENST00000622665.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR GCA 90 bp GAAGAGTGGGTCCTCCCGGATCTTGCTGGCCATGTCAAGAAGGGAATTGGCACCACCGAGATGGTCCAGTaGCCACCCGTTAAAGAGTCA +
Preference number: 4 (lower is better)
Translates to: EEWVLPDLAGHVKKGIGTTEMVQ*PPVKES
Trigger: TGACTCTTTAACGGGTGGGCACTGGACCATCTCGGT...GGTGCCAATTCCCTTCTTGACATGGCCAGCAAGATCCGGGAGGACCCACTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CCA 90 bp GACCCTGCTTCCCTGGTGCTCTTCTTGCTGGCATGTCTTGGGGGTGAGTGGGAGCTTCTGGATCTGGAATaGTTCTTCATCCCATGCCCT +
Preference number: 4 (lower is better)
Translates to: DPASLVLFLLACLGGEWELLDLE*FFIPCP
Trigger: AGGGCATGGGATGAAGAACCATTCCAGATCCAGAAG...CTCCCACTCACCCCCAAGACATGCCAGCAAGAAGAGCACCAGGGAAGCAGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR CCA 90 bp GAATGCCCAGTACCTGGCAGCTTCCAGCACAGGGCAGGTGTTCATGTCTGTGGAATGGGGTGTGGATCTTaGCTCAGAGCTTCTCGAGTC +
Preference number: 4 (lower is better)
Translates to: ECPVPGSFQHRAGVHVCGMGCGS*LRASRV
Trigger: GACTCGAGAAGCTCTGAGCCAAGATCCACACCCCAT...TCCACAGACATGAACACCTGCCCTGTGCTGGAAGCTGCCAGGTACTGGGCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000622665.1
ENST00000631509.1
ENST00000632717.1
CDS-3UTR CCA 90 bp GTGGCACAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAATGGGGTGTGGATCTTaGCTCAGAGCTTCTCGAGTC +
Preference number: 4 (lower is better)
Translates to: VAQALPPRWSSAHPLKSQMGCGS*LRASRV
Trigger: GACTCGAGAAGCTCTGAGCCAAGATCCACACCCCAT...TTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CCA 90 bp CGCCACATGCTCACCTCCCTGCACTGTGCTCATCCTCGCTGCTGGAACGATCACAAACATATTTGTCAATaGGGCGCCCCAGCAGGTACT +
Preference number: 4 (lower is better)
Translates to: RHMLTSLHCAHPRCWNDHKHICQ*GAPAGT
Trigger: AGTACCTGCTGGGGCGCCCCATTGACAAATATGTTT...GTGATCGTTCCAGCAGCGAGGATGAGCACAGTGCAGGGAGGTGAGCATGTGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000622665.1
ENST00000631509.1
ENST00000632717.1
CDS-3UTR CCA 90 bp GTGGCACAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAACCTGATGATGAAGAGTaGGTCCTCCCGGATCTTGCT +
Preference number: 4 (lower is better)
Translates to: VAQALPPRWSSAHPLKSQPDDEE*VLPDLA
Trigger: AGCAAGATCCGGGAGGACCCACTCTTCATCATCAGG...TTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CCA 90 bp GACCCTGAAGACCCTGGTTACGGTCAGAGTTCCGGACCTGTAAGCCATATCCAGAGATGGCAAGCTCTGTaGGCACTGGGCCCATGTTCA +
Preference number: 4 (lower is better)
Translates to: DPEDPGYGQSSGPVSHIQRWQAL*ALGPCS
Trigger: TGAACATGGGCCCAGTGCCCACAGAGCTTGCCATCT...CTGGATATGGCTTACAGGTCCGGAACTCTGACCGTAACCAGGGTCTTCAGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619462.4
ENST00000631509.1
ENST00000633854.1
CDS-3UTR CCA 90 bp GACCCTGAAGACCCTGGTTACGGTCAGAGTTCCGGACCTGTAAGCCATATCCAGAGTTGTGCAGTTTGCTaGGTCTTGGGGACCGTGACC +
Preference number: 4 (lower is better)
Translates to: DPEDPGYGQSSGPVSHIQSCAVC*VLGTVT
Trigger: GGTCACGGTCCCCAAGACCCAGCAAACTGCACAACT...CTGGATATGGCTTACAGGTCCGGAACTCTGACCGTAACCAGGGTCTTCAGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR CCA 90 bp CAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAAACCCATCCAGCTTCATGCGGTaGATGAACTTCCCATCCCGG +
Preference number: 4 (lower is better)
Translates to: QALPPRWSSAHPLKSQNPSSFMR*MNFPSR
Trigger: CCGGGATGGGAAGTTCATCCACCGCATGAAGCTGGA...TGGGTTTTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
CDS-3UTR TCA 90 bp GGTTACGGTCAGAGTTCCGGACCTGTAAGCCATATCCAGGGACTTTGGACAAAAGGCATGTCTTGGGGGTaGGTGGGAGGAGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: GYGQSSGPVSHIQGLWTKGMSWG*VGGASG
Trigger: TCCAGAAGCTCCTCCCACTCACCCCCAAGACATGCC...TTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCCGGAACTCTGACCGTAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR TCA 90 bp CTGGCCATGTCAAGAAGGGAATTGGCACCTGATGGGGCAAAGATAGAGCCTGGGAAGGGAATTGGCACCTaGTGGGGCAAAGATAGAGCC +
Preference number: 4 (lower is better)
Translates to: LAMSRRELAPDGAKIEPGKGIGT*WGKDRA
Trigger: GGCTCTATCTTTGCCCCATCAGGTGCCAATTCCCTT...CCCAGGCTCTATCTTTGCCCCATCAGGTGCCAATTCCCTTCTTGACATGGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR TCA 90 bp CCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGCTCTTTCTCCACATTCCTaGGGGTCTGCGGGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: PRCWNDHYSSFCAYVSCALSPHS*GSAGAS
Trigger: GCTGGCACCCGCAGACCCTCAGGAATGTGGAGAAAG...AGCACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000619299.4
ENST00000622665.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR TCA 90 bp GACCCTGCTTCCCTGGTGCTCTTCTTGCTGGCATGTCTTGGGGGTGAGTGGGAGTGTTTCAGGACTCAATaGAGCAGGGTCACTTTGAAC +
Preference number: 4 (lower is better)
Translates to: DPASLVLFLLACLGGEWECFRTQ*SRVTLN
Trigger: GTTCAAAGTGACCCTGCTTCATTGAGTCCTGAAACA...CTCCCACTCACCCCCAAGACATGCCAGCAAGAAGAGCACCAGGGAAGCAGGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR TCA 90 bp GTGGCACAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAATGTACGCTGAGGCAGTaGAATAGGTCTGTTGGCACA +
Preference number: 4 (lower is better)
Translates to: VAQALPPRWSSAHPLKSQCTLRQ*NRSVGT
Trigger: TGTGCCAACAGACCTATTTCACTGCCTCAGCGTACA...TTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
CDS-3UTR GCA 90 bp TGGGAGGAGCTTCTGGATCTGGAATGGTTCTTCATCCCATGCCCTCTCTTTTGCCCCTGGTGCTCTTCTTaGTGGCATGTCTTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: WEELLDLEWFFIPCPLFCPWCSS*WHVLGV
Trigger: CACCCCCAAGACATGCCAGCAAGAAGAGCACCAGGG...GCAAAAGAGAGGGCATGGGATGAAGAACCATTCCAGATCCAGAAGCTCCTCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR GCA 90 bp GTGGGAGGAGCTTCTGGATCTGGAATGGTTCTTCATCCCATGCCCTCTCTTTTGCCCTGGTGCTCTTCTTaGTGGCATGTCTTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: VGGASGSGMVLHPMPSLLPWCSS*WHVLGV
Trigger: CACCCCCAAGACATGCCAGCAAGAAGAGCACCAGGG...CAAAAGAGAGGGCATGGGATGAAGAACCATTCCAGATCCAGAAGCTCCTCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR GCA 90 bp GGCAAAGATAGAGCCTGGGAGAAGTCCTGTTTCAGAAGAGCAGCCTGCCTCCTTACCCTGCTTCCCTGGTaGTCTTCTTGCTGGCATGTC +
Preference number: 4 (lower is better)
Translates to: GKDRAWEKSCFRRAACLLTLLPW*SSCWHV
Trigger: GACATGCCAGCAAGAAGAGCACCAGGGAAGCAGGGT...AAGGAGGCAGGCTGCTCTTCTGAAACAGGACTTCTCCCAGGCTCTATCTTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR GCA 90 bp CTCCTGTTCACCTTAGAGTTGTGCAGTTTGCTGGGTCTTGGGGACCGTGACCTTACCCTGCTTCCCTGGTaGTCTTCTTGCTGGCATGTC +
Preference number: 4 (lower is better)
Translates to: LLFTLELCSLLGLGDRDLTLLPW*SSCWHV
Trigger: GACATGCCAGCAAGAAGAGCACCAGGGAAGCAGGGT...AAGGTCACGGTCCCCAAGACCCAGCAAACTGCACAACTCTAAGGTGAACAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR GCA 90 bp CTCCTCCTAAACCAGCCAGATTCAGAGAGAAAAACGAGCTGGCCTGCCTTATTGCCTGTCCCGGGACCCTaGTTCCCTGGTGCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LLLNQPDSERKTSWPALLPVPGP*FPGALL
Trigger: AAGAAGAGCACCAGGGAAGCAGGGTCCCGGGACAGG...CAATAAGGCAGGCCAGCTCGTTTTTCTCTCTGAATCTGGCTGGTTTAGGAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR GCA 90 bp TACGGTCAGAGTTCCGGACCTGTAAGCCATATCCAGGGACTTTGGACAAAACAGCCTGTCCCGGGACCCTaGTTCCCTGGTGCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: YGQSSGPVSHIQGLWTKQPVPGP*FPGALL
Trigger: AAGAAGAGCACCAGGGAAGCAGGGTCCCGGGACAGG...CTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCCGGAACTCTGACCGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR GCA 90 bp TTCCGGACCTGTAAGCCATATCCAGGGACTTTGGACAAAACAGGGGAGGAATTTGGGACCGTGACCTTCTaGCCAGGGATCGAGACCTCC +
Preference number: 4 (lower is better)
Translates to: FRTCKPYPGTLDKTGEEFGTVTF*PGIETS
Trigger: GGAGGTCTCGATCCCTGGGCAGAAGGTCACGGTCCC...AAATTCCTCCCCTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCCGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR GCA 90 bp CACTGTGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGGTCCTCCCGGATCTTaGTGGCCATGTCAAGAAGGG +
Preference number: 4 (lower is better)
Translates to: HCAHPRCWNDHYSSFCAYGPPGS*WPCQEG
Trigger: CCCTTCTTGACATGGCCAGCAAGATCCGGGAGGACC...ATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR GCA 90 bp CAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAAACCCATGTGCTCATCCTCGCTaGTGGAACGATCACTACTCG +
Preference number: 4 (lower is better)
Translates to: QALPPRWSSAHPLKSQNPCAHPR*WNDHYS
Trigger: CGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACA...TGGGTTTTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
CDS-3UTR GCA 90 bp GCACAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAAACTGTGCTCATCCTCGCTaGTGGAACGATCACTACTCG +
Preference number: 4 (lower is better)
Translates to: AQALPPRWSSAHPLKSQNCAHPR*WNDHYS
Trigger: CGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACA...GTTTTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
CDS-3UTR GCA 90 bp CTGGCCATGTCAAGAAGGGAATTGGCACCTGATGGGGCAAAGATAGAGCCTGGGTGTGCTCATCCTCGCTaGTGGAACGATCACTACTCG +
Preference number: 4 (lower is better)
Translates to: LAMSRRELAPDGAKIEPGCAHPR*WNDHYS
Trigger: CGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACA...CCCAGGCTCTATCTTTGCCCCATCAGGTGCCAATTCCCTTCTTGACATGGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR GCA 90 bp CACGGTTCACCATCCCACCAGGACCCTGGTACATCCAGTCCAACTTTTCTTCTTTTCCGCTCAGCCTCATaGTTCTGCTCGGCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: HGSPSHQDPGTSSPTFLLFRSAS*FCSAFH
Trigger: GTGGAAGGCCGAGCAGAAGCATGAGGCTGAGCGGAA...AAGAAGAAAAGTTGGACTGGATGTACCAGGGTCCTGGTGGGATGGTGAACCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000619299.4
ENST00000622665.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR GCA 90 bp GCACAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAAACCAGGGAGGAAGTAGATaGACTCTCCAGCTTCATGCG +
Preference number: 4 (lower is better)
Translates to: AQALPPRWSSAHPLKSQNQGGSR*TLQLHA
Trigger: CGCATGAAGCTGGAGAGTGCATCTACTTCCTCCCTG...GTTTTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
CDS-3UTR GCA 90 bp CAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAAACCCAACCGAGATGGTCCAGTaGCCACCCGTTAAAGAGTCA +
Preference number: 4 (lower is better)
Translates to: QALPPRWSSAHPLKSQNPTEMVQ*PPVKES
Trigger: TGACTCTTTAACGGGTGGGCACTGGACCATCTCGGT...TGGGTTTTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CCA 90 bp CACATGCTCACCTCCCTGCACTGTGCTCATCCTCGCTGCTGGAACGATCACTACATCCCACCAGGACCCTaGTACATCCAGTCCAACTTT +
Preference number: 4 (lower is better)
Translates to: HMLTSLHCAHPRCWNDHYIPPGP*YIQSNF
Trigger: AAAGTTGGACTGGATGTACCAGGGTCCTGGTGGGAT...GTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGTGCAGGGAGGTGAGCATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000622665.1
ENST00000631509.1
ENST00000632717.1
CDS-3UTR CCA 90 bp GGTCAGAGTTCCGGACCTGTAAGCCATATCCAGGGACTTTGGACAAAACAGGGGGCTCATCCTCGCTGCTaGAACGATCACTACTCGAGC +
Preference number: 4 (lower is better)
Translates to: GQSSGPVSHIQGLWTKQGAHPRC*NDHYSS
Trigger: GCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGC...CCCCTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCCGGAACTCTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR CCA 90 bp GGTCAGAGTTCCGGACCTGTAAGCCATATCCAGGGACTTTGGACAAAACAGGGGAGTTGTGCAGTTTGCTaGGTCTTGGGGACCGTGACC +
Preference number: 4 (lower is better)
Translates to: GQSSGPVSHIQGLWTKQGSCAVC*VLGTVT
Trigger: GGTCACGGTCCCCAAGACCCAGCAAACTGCACAACT...CCCCTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCCGGAACTCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR CCA 90 bp GTGGCACAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAACTCACTACGCGGATCTaGAAGATTTCGGGAGGATCA +
Preference number: 4 (lower is better)
Translates to: VAQALPPRWSSAHPLKSQLTTRI*KISGGS
Trigger: TGATCCTCCCGAAATCTTCCAGATCCGCGTAGTGAG...TTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CCA 90 bp CTCCCGTTCCTCATCCTTAGCATGCCTCTTGAGGATGTTCAGTCTCTCCTCCTCTCCAGCTTCATGCGGTaGATGAACTTCCCATCCCGG +
Preference number: 4 (lower is better)
Translates to: LPFLILSMPLEDVQSLLLSSFMR*MNFPSR
Trigger: CCGGGATGGGAAGTTCATCCACCGCATGAAGCTGGA...GAGGAGGAGAGACTGAACATCCTCAAGAGGCATGCTAAGGATGAGGAACGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR TCA 90 bp CTCCTCCTAAACCAGCCAGATTCAGAGAGAAAAACGAGCTGGCCTGCCTTATTGGCTTCATGCGGTGGATaGACTTCCCATCCCGGGAGT +
Preference number: 4 (lower is better)
Translates to: LLLNQPDSERKTSWPALLASCGG*TSHPGS
Trigger: ACTCCCGGGATGGGAAGTTCATCCACCGCATGAAGC...CAATAAGGCAGGCCAGCTCGTTTTTCTCTCTGAATCTGGCTGGTTTAGGAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR TCA 90 bp TGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCGCTTCATGCGGTGGATaGACTTCCCATCCCGGGAGT +
Preference number: 4 (lower is better)
Translates to: CSSSLLERSLLELLCLCFASCGG*TSHPGS
Trigger: ACTCCCGGGATGGGAAGTTCATCCACCGCATGAAGC...GAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR TCA 90 bp CTGGCCATGTCAAGAAGGGAATTGGCACCTGATGGGGCAAAGATAGAGCCTGGGTGTACGCTGAGGCAGTaGAATAGGTCTGTTGGCACA +
Preference number: 4 (lower is better)
Translates to: LAMSRRELAPDGAKIEPGCTLRQ*NRSVGT
Trigger: TGTGCCAACAGACCTATTTCACTGCCTCAGCGTACA...CCCAGGCTCTATCTTTGCCCCATCAGGTGCCAATTCCCTTCTTGACATGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR TCA 90 bp TTGGCACCTGATGGGGCAAAGATAGAGCCTGGGAGAAGTCCTGTTTCAGAAGAGGGGTCTGGTGTACGCTaGGGCAGTGAAATAGGTCTG +
Preference number: 4 (lower is better)
Translates to: LAPDGAKIEPGRSPVSEEGSGVR*GSEIGL
Trigger: CAGACCTATTTCACTGCCTCAGCGTACACCAGACCC...CTCTTCTGAAACAGGACTTCTCCCAGGCTCTATCTTTGCCCCATCAGGTGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR TCA 90 bp TTCCTCTGCAGAGAGTTTTCTGGTGTATCCGGGAGCATGTCGCCTTTGGTAGACGGGTCTGGTGTACGCTaGGGCAGTGAAATAGGTCTG +
Preference number: 4 (lower is better)
Translates to: FLCREFSGVSGSMSPLVDGSGVR*GSEIGL
Trigger: CAGACCTATTTCACTGCCTCAGCGTACACCAGACCC...GTCTACCAAAGGCGACATGCTCCCGGATACACCAGAAAACTCTCTGCAGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR TCA 90 bp CTCCCGTTCCTCATCCTTAGCATGCCTCTTGAGGATGTTCAGTCTCTCCTCCTCATTTCCAAGATGACTTaGCGGCCCCAACATCCTCCG +
Preference number: 4 (lower is better)
Translates to: LPFLILSMPLEDVQSLLLISKMT*RPQHPP
Trigger: CGGAGGATGTTGGGGCCGTCAAGTCATCTTGGAAAT...GAGGAGGAGAGACTGAACATCCTCAAGAGGCATGCTAAGGATGAGGAACGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR GCA 90 bp CTGGTGCTCTTCTTGCTGGCATGTCTTGGGGGTGAGTGGGAGGAGCTTCTGGATTGGTTCTTCATCCCATaGCCTCTCTTTTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LVLFLLACLGGEWEELLDWFFIP*PLFCSA
Trigger: AGCAGAGCAAAAGAGAGGGCATGGGATGAAGAACCA...ATCCAGAAGCTCCTCCCACTCACCCCCAAGACATGCCAGCAAGAAGAGCACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR GCA 90 bp ACTCTAGCATTAGATGGCAAGCTCTGTGGGCACTGGGCCCATGTTCAAGTGTTCACCCTGCTTCCCTGGTaGTCTTCTTGCTGGCATGTC +
Preference number: 4 (lower is better)
Translates to: TLALDGKLCGHWAHVQVFTLLPW*SSCWHV
Trigger: GACATGCCAGCAAGAAGAGCACCAGGGAAGCAGGGT...GAACACTTGAACATGGGCCCAGTGCCCACAGAGCTTGCCATCTAATGCTAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619462.4
ENST00000631509.1
ENST00000633854.1
CDS-3UTR GCA 90 bp ACGGTTCACCATCCCACCAGGACCCTGGTACATCCAGTCCAACTTTTCTTCTTTCACCTCCCTGCACTGTaGTCATCCTCGCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: TVHHPTRTLVHPVQLFFFHLPAL*SSSLLE
Trigger: TTCCAGCAGCGAGGATGAGCACAGTGCAGGGAGGTG...AAAGAAGAAAAGTTGGACTGGATGTACCAGGGTCCTGGTGGGATGGTGAACCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000622665.1
ENST00000631509.1
ENST00000632717.1
CDS-3UTR GCA 90 bp TTGGCACCTGATGGGGCAAAGATAGAGCCTGGGAGAAGTCCTGTTTCAGAAGAGACATGCTCACCTCCCTaGACTGTGCTCATCCTCGCT +
Preference number: 4 (lower is better)
Translates to: LAPDGAKIEPGRSPVSEETCSPP*TVLILA
Trigger: AGCGAGGATGAGCACAGTGCAGGGAGGTGAGCATGT...CTCTTCTGAAACAGGACTTCTCCCAGGCTCTATCTTTGCCCCATCAGGTGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000622665.1
ENST00000631509.1
ENST00000632717.1
CDS-3UTR GCA 90 bp TGGGAGGAGCTTCTGGATCTGGAATGGTTCTTCATCCCATGCCCTCTCTTTTGCACATGCTCACCTCCCTaGACTGTGCTCATCCTCGCT +
Preference number: 4 (lower is better)
Translates to: WEELLDLEWFFIPCPLFCTCSPP*TVLILA
Trigger: AGCGAGGATGAGCACAGTGCAGGGAGGTGAGCATGT...GCAAAAGAGAGGGCATGGGATGAAGAACCATTCCAGATCCAGAAGCTCCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618122.4
ENST00000631509.1
CDS-3UTR GCA 90 bp GTGGCACAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAATTCACCTTAGAGTTGTaGAGTTTGCTGGGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: VAQALPPRWSSAHPLKSQFTLEL*SLLGLG
Trigger: CCCAAGACCCAGCAAACTGCACAACTCTAAGGTGAA...TTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
CDS-3UTR GCA 90 bp CGGACCTGTAAGCCATATCCAGGGACTTTGGACAAAACAGGGGAGGAATTTGCCTGTCTCCCTGCACTGTaGTCATCCTCGCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: RTCKPYPGTLDKTGEEFACLPAL*SSSLLE
Trigger: TTCCAGCAGCGAGGATGAGCACAGTGCAGGGAGACA...GGCAAATTCCTCCCCTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619462.4
ENST00000633854.1
CDS-3UTR GCA 90 bp TGGGAGGAGCTTCTGGATCTGGAATGGTTCTTCATCCCATGCCCTCTCTTTTGCTGTCTCCCTGCACTGTaGTCATCCTCGCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: WEELLDLEWFFIPCPLFCCLPAL*SSSLLE
Trigger: TTCCAGCAGCGAGGATGAGCACAGTGCAGGGAGACA...GCAAAAGAGAGGGCATGGGATGAAGAACCATTCCAGATCCAGAAGCTCCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619462.4
ENST00000633854.1
CDS-3UTR GCA 90 bp CTCCTCCTAAACCAGCCAGATTCAGAGAGAAAAACGAGCTGGCCTGCCTTATTGCCAGGAGCCGTCAACTaGCAGTTTCACCACCGCTCT +
Preference number: 4 (lower is better)
Translates to: LLLNQPDSERKTSWPALLPGAVN*QFHHRS
Trigger: AGAGCGGTGGTGAAACTGGCAGTTGACGGCTCCTGG...CAATAAGGCAGGCCAGCTCGTTTTTCTCTCTGAATCTGGCTGGTTTAGGAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CCA 90 bp GTGGCACAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAAGTGGGAGGAGCTTCTaGATCTGGAATGGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: VAQALPPRWSSAHPLKSQSGRSF*IWNGSS
Trigger: TGAAGAACCATTCCAGATCCAGAAGCTCCTCCCACT...TTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CCA 90 bp CTGGTGCTCTTCTTGCTGGCATGTCTTGGGGGTGAGTGGGAGGAGCTTCTGGATAGTGGGAGGAGCTTCTaGATCTGGAATGGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LVLFLLACLGGEWEELLDSGRSF*IWNGSS
Trigger: TGAAGAACCATTCCAGATCCAGAAGCTCCTCCCACT...ATCCAGAAGCTCCTCCCACTCACCCCCAAGACATGCCAGCAAGAAGAGCACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR CCA 90 bp CTGCACTGTGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTATCCCACCAGGACCCTaGTACATCCAGTCCAACTTT +
Preference number: 4 (lower is better)
Translates to: LHCAHPRCWNDHYSSFCAIPPGP*YIQSNF
Trigger: AAAGTTGGACTGGATGTACCAGGGTCCTGGTGGGAT...AGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR CCA 90 bp GAAGAGTGGGTCCTCCCGGATCTTGCTGGCCATGTCAAGAAGGGAATTGGCACCTGTCAAGAAGGGAATTaGCACCTGATGGGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: EEWVLPDLAGHVKKGIGTCQEGN*HLMGQR
Trigger: TCTTTGCCCCATCAGGTGCCAATTCCCTTCTTGACA...GGTGCCAATTCCCTTCTTGACATGGCCAGCAAGATCCGGGAGGACCCACTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR CCA 90 bp CACATGCTCACCTCCCTGCACTGTGCTCATCCTCGCTGCTGGAACGATCACTACTGTCAAGAAGGGAATTaGCACCTGATGGGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: HMLTSLHCAHPRCWNDHYCQEGN*HLMGQR
Trigger: TCTTTGCCCCATCAGGTGCCAATTCCCTTCTTGACA...GTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGTGCAGGGAGGTGAGCATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000622665.1
ENST00000631509.1
ENST00000632717.1
CDS-3UTR CCA 90 bp CTGGTGCTCTTCTTGCTGGCATGTCTTGGGGGTGAGTGGGAGGAGCTTCTGGATTGTCAAGAAGGGAATTaGCACCTGATGGGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: LVLFLLACLGGEWEELLDCQEGN*HLMGQR
Trigger: TCTTTGCCCCATCAGGTGCCAATTCCCTTCTTGACA...ATCCAGAAGCTCCTCCCACTCACCCCCAAGACATGCCAGCAAGAAGAGCACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR CCA 90 bp GGCAAAGATAGAGCCTGGGAGAAGTCCTGTTTCAGAAGAGCAGCCTGCCTCCTTCCTGATGATGAAGAGTaGGTCCTCCCGGATCTTGCT +
Preference number: 4 (lower is better)
Translates to: GKDRAWEKSCFRRAACLLPDDEE*VLPDLA
Trigger: AGCAAGATCCGGGAGGACCCACTCTTCATCATCAGG...AAGGAGGCAGGCTGCTCTTCTGAAACAGGACTTCTCCCAGGCTCTATCTTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR CCA 90 bp ACTGTGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGGCTCATCCTCGCTGCTaGAACGATCACTACTCGAGC +
Preference number: 4 (lower is better)
Translates to: TVLILAAGTITTRASVLMAHPRC*NDHYSS
Trigger: GCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGC...CATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR CCA 90 bp GAGTGGGAGGAGCTTCTGGATCTGGAATGGTTCTTCATCCCATGCCCTCTCTTTAGATGGCAAGCTCTGTaGGCACTGGGCCCATGTTCA +
Preference number: 4 (lower is better)
Translates to: EWEELLDLEWFFIPCPLFRWQAL*ALGPCS
Trigger: TGAACATGGGCCCAGTGCCCACAGAGCTTGCCATCT...AAAGAGAGGGCATGGGATGAAGAACCATTCCAGATCCAGAAGCTCCTCCCACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619462.4
ENST00000631509.1
ENST00000633854.1
CDS-3UTR CCA 90 bp GTGGGAGGAGCTTCTGGATCTGGAATGGTTCTTCATCCCATGCCCTCTCTTTTGAGATGGCAAGCTCTGTaGGCACTGGGCCCATGTTCA +
Preference number: 4 (lower is better)
Translates to: VGGASGSGMVLHPMPSLLRWQAL*ALGPCS
Trigger: TGAACATGGGCCCAGTGCCCACAGAGCTTGCCATCT...CAAAAGAGAGGGCATGGGATGAAGAACCATTCCAGATCCAGAAGCTCCTCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619462.4
ENST00000631509.1
ENST00000633854.1
CDS-3UTR CCA 90 bp TTGGCACCTGATGGGGCAAAGATAGAGCCTGGGAGAAGTCCTGTTTCAGAAGAGAGTTGTGCAGTTTGCTaGGTCTTGGGGACCGTGACC +
Preference number: 4 (lower is better)
Translates to: LAPDGAKIEPGRSPVSEESCAVC*VLGTVT
Trigger: GGTCACGGTCCCCAAGACCCAGCAAACTGCACAACT...CTCTTCTGAAACAGGACTTCTCCCAGGCTCTATCTTTGCCCCATCAGGTGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR CCA 90 bp ACTGTGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTCCAGCTTCATGCGGTaGATGAACTTCCCATCCCGG +
Preference number: 4 (lower is better)
Translates to: TVLILAAGTITTRASVLMSSFMR*MNFPSR
Trigger: CCGGGATGGGAAGTTCATCCACCGCATGAAGCTGGA...CATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CCA 90 bp TTCCGGACCTGTAAGCCATATCCAGGGACTTTGGACAAAACAGGGGAGGAATTTGCACTCCCACCGAGATaGTCCAGTGCCCACCCGTTA +
Preference number: 4 (lower is better)
Translates to: FRTCKPYPGTLDKTGEEFALPPR*SSAHPL
Trigger: TAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGC...AAATTCCTCCCCTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCCGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
3UTR CAA 72 bp CTCCTTCTGATGATGAAGAGTGGGTCCTCCCGGATCTaGCTGGCCATGTCAAGAAGGGAATTGGCACCTGAT +
Preference number: 4 (lower is better)
Translates to: LLLMMKSGSSRI*LAMSRRELAPD
Trigger: ATCAGGTGCCAATTCCCTTCTTGACATGGCCAGCAAGATCCGGGAGGACCCACTCTTCATCATCAGAAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622665.1
ENST00000632717.1
CDS-3UTR TCA 90 bp GAGTCAAAACCCAAAGTTACTGAGTGTCCCACAAAGCAAGTCACACTAGCTCTCCTTTCTCCACATTCCTaGGGGTCTGCGGGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: ESKPKVTECPTKQVTLALLSPHS*GSAGAS
Trigger: GCTGGCACCCGCAGACCCTCAGGAATGTGGAGAAAG...GAGAGCTAGTGTGACTTGCTTTGTGGGACACTCAGTAACTTTGGGTTTTGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
CDS-3UTR TCA 90 bp CAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAAACCCATCACTCCCTTGGCTTTaGCCTAACCTGACATCATTC +
Preference number: 4 (lower is better)
Translates to: QALPPRWSSAHPLKSQNPSLPWL*PNLTSF
Trigger: GAATGATGTCAGGTTAGGTCAAAGCCAAGGGAGTGA...TGGGTTTTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR GCA 90 bp AGTGGGAGGAGCTTCTGGATCTGGAATGGTTCTTCATCCCATGCCCTCTCTTTTCCATGCCCTCTCTTTTaGTCTGCTGTCAGAGGACCC +
Preference number: 4 (lower is better)
Translates to: SGRSFWIWNGSSSHALSFPCPLF*SAVRGP
Trigger: GGGTCCTCTGACAGCAGAGCAAAAGAGAGGGCATGG...AAAAGAGAGGGCATGGGATGAAGAACCATTCCAGATCCAGAAGCTCCTCCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR GCA 90 bp CAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAAACCCATGGTTCTTCATCCCATaGCCTCTCTTTTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: QALPPRWSSAHPLKSQNPWFFIP*PLFCSA
Trigger: AGCAGAGCAAAAGAGAGGGCATGGGATGAAGAACCA...TGGGTTTTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
CDS-3UTR GCA 90 bp ATGTTACATTCTCTAGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCGGGACCGTGACCTTCTaGCCAGGGATCGAGACCTCC +
Preference number: 4 (lower is better)
Translates to: MLHSLGKDRVSSITVPGIGTVTF*PGIETS
Trigger: GGAGGTCTCGATCCCTGGGCAGAAGGTCACGGTCCC...GATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCTAGAGAATGTAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR GCA 90 bp TGGGAGGAGCTTCTGGATCTGGAATGGTTCTTCATCCCATGCCCTCTCTTTTGCTGTGCTCATCCTCGCTaGTGGAACGATCACTACTCG +
Preference number: 4 (lower is better)
Translates to: WEELLDLEWFFIPCPLFCCAHPR*WNDHYS
Trigger: CGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACA...GCAAAAGAGAGGGCATGGGATGAAGAACCATTCCAGATCCAGAAGCTCCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR GCA 90 bp CTCCTGTTCACCTTAGAGTTGTGCAGTTTGCTGGGTCTTGGGGACCGTGACCTTGTGTTCATCACTGAATaGCCAGTACCTGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LLFTLELCSLLGLGDRDLVFITE*PVPGSF
Trigger: GAAGCTGCCAGGTACTGGGCATTCAGTGATGAACAC...AAGGTCACGGTCCCCAAGACCCAGCAAACTGCACAACTCTAAGGTGAACAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619462.4
ENST00000631509.1
ENST00000633854.1
CDS-3UTR GCA 90 bp GACCCTGAAGACCCTGGTTACGGTCAGAGTTCCGGACCTGTAAGCCATATCCAGTTCACCTTAGAGTTGTaGAGTTTGCTGGGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: DPEDPGYGQSSGPVSHIQFTLEL*SLLGLG
Trigger: CCCAAGACCCAGCAAACTGCACAACTCTAAGGTGAA...CTGGATATGGCTTACAGGTCCGGAACTCTGACCGTAACCAGGGTCTTCAGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR GCA 90 bp CGGACCTGTAAGCCATATCCAGGGACTTTGGACAAAACAGGGGAGGAATTTGCCTCAGCCTCATGCTTCTaGTCGGCCTTCCACACTTTC +
Preference number: 4 (lower is better)
Translates to: RTCKPYPGTLDKTGEEFASASCF*SAFHTF
Trigger: GAAAGTGTGGAAGGCCGAGCAGAAGCATGAGGCTGA...GGCAAATTCCTCCCCTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR GCA 90 bp TTCCGGACCTGTAAGCCATATCCAGGGACTTTGGACAAAACAGGGGAGGAATTTTTCCGCTCAGCCTCATaGTTCTGCTCGGCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: FRTCKPYPGTLDKTGEEFFRSAS*FCSAFH
Trigger: GTGGAAGGCCGAGCAGAAGCATGAGGCTGAGCGGAA...AAATTCCTCCCCTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCCGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR GCA 90 bp CTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGCTTTTCCGCTCAGCCTCATaGTTCTGCTCGGCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: LAAGTITTRASVLMFLVLFRSAS*FCSAFH
Trigger: GTGGAAGGCCGAGCAGAAGCATGAGGCTGAGCGGAA...AAGCACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000619299.4
ENST00000622665.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR GCA 90 bp CTCCTCCTAAACCAGCCAGATTCAGAGAGAAAAACGAGCTGGCCTGCCTTATTGGATCTCCCTGCACTGTaGTCATCCTCGCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: LLLNQPDSERKTSWPALLDLPAL*SSSLLE
Trigger: TTCCAGCAGCGAGGATGAGCACAGTGCAGGGAGATC...CAATAAGGCAGGCCAGCTCGTTTTTCTCTCTGAATCTGGCTGGTTTAGGAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR GCA 90 bp GGACCTGTAAGCCATATCCAGGGACTTTGGACAAAACAGGGGAGGAATTTGCCAGATCTCCCTGCACTGTaGTCATCCTCGCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: GPVSHIQGLWTKQGRNLPDLPAL*SSSLLE
Trigger: TTCCAGCAGCGAGGATGAGCACAGTGCAGGGAGATC...TGGCAAATTCCTCCCCTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR GCA 90 bp GTGGGAGGAGCTTCTGGATCTGGAATGGTTCTTCATCCCATGCCCTCTCTTTTGCAGGGAGGAAGTAGATaGACTCTCCAGCTTCATGCG +
Preference number: 4 (lower is better)
Translates to: VGGASGSGMVLHPMPSLLQGGSR*TLQLHA
Trigger: CGCATGAAGCTGGAGAGTGCATCTACTTCCTCCCTG...CAAAAGAGAGGGCATGGGATGAAGAACCATTCCAGATCCAGAAGCTCCTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CCA 90 bp ATGAACTTCCCATCCCGGGAGTCCAGCTTCTCTAGCCTCTGCTCCCGTTCCTCACATATCCAGGGACTTTaGACAAAACAGGGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: MNFPSRESSFSSLCSRSSHIQGL*TKQGRN
Trigger: ATTCCTCCCCTGTTTTGTCCAAAGTCCCTGGATATG...TGAGGAACGGGAGCAGAGGCTAGAGAAGCTGGACTCCCGGGATGGGAAGTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CCA 90 bp GCACAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAAACCTTCTGGATCTGGAATaGTTCTTCATCCCATGCCCT +
Preference number: 4 (lower is better)
Translates to: AQALPPRWSSAHPLKSQNLLDLE*FFIPCP
Trigger: AGGGCATGGGATGAAGAACCATTCCAGATCCAGAAG...GTTTTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CCA 90 bp TGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCAGTTGTGCAGTTTGCTaGGTCTTGGGGACCGTGACC +
Preference number: 4 (lower is better)
Translates to: CSSSLLERSLLELLCLCFSCAVC*VLGTVT
Trigger: GGTCACGGTCCCCAAGACCCAGCAAACTGCACAACT...GAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR CCA 90 bp AGTGGGAGGAGCTTCTGGATCTGGAATGGTTCTTCATCCCATGCCCTCTCTTTTAGTTGTGCAGTTTGCTaGGTCTTGGGGACCGTGACC +
Preference number: 4 (lower is better)
Translates to: SGRSFWIWNGSSSHALSFSCAVC*VLGTVT
Trigger: GGTCACGGTCCCCAAGACCCAGCAAACTGCACAACT...AAAAGAGAGGGCATGGGATGAAGAACCATTCCAGATCCAGAAGCTCCTCCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR CCA 90 bp TTCCTCTGCAGAGAGTTTTCTGGTGTATCCGGGAGCATGTCGCCTTTGGTAGACGATGGGCTCCTAGTTTaGCCTGTCTCTCTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: FLCREFSGVSGSMSPLVDDGLLV*PVSLLF
Trigger: GAACAGGAGAGAGACAGGCCAAACTAGGAGCCCATC...GTCTACCAAAGGCGACATGCTCCCGGATACACCAGAAAACTCTCTGCAGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR CCA 90 bp TGGGAGGAGCTTCTGGATCTGGAATGGTTCTTCATCCCATGCCCTCTCTTTTGCGATGGGCTCCTAGTTTaGCCTGTCTCTCTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: WEELLDLEWFFIPCPLFCDGLLV*PVSLLF
Trigger: GAACAGGAGAGAGACAGGCCAAACTAGGAGCCCATC...GCAAAAGAGAGGGCATGGGATGAAGAACCATTCCAGATCCAGAAGCTCCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR CCA 90 bp CTTCCTGATGATGAAGAGTGGGTCCTCCCGGATCTTGCTGGCCATGTCAAGAAGCTCACTACGCGGATCTaGAAGATTTCGGGAGGATCA +
Preference number: 4 (lower is better)
Translates to: LPDDEEWVLPDLAGHVKKLTTRI*KISGGS
Trigger: TGATCCTCCCGAAATCTTCCAGATCCGCGTAGTGAG...CTTCTTGACATGGCCAGCAAGATCCGGGAGGACCCACTCTTCATCATCAGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CCA 90 bp CCTTCTGATGATGAAGAGTGGGTCCTCCCGGATCTTGCTGGCCATGTCAAGAAGTCTGATGATGAAGAGTaGGTCCTCCCGGATCTTGCT +
Preference number: 4 (lower is better)
Translates to: PSDDEEWVLPDLAGHVKKSDDEE*VLPDLA
Trigger: AGCAAGATCCGGGAGGACCCACTCTTCATCATCAGA...CTTCTTGACATGGCCAGCAAGATCCGGGAGGACCCACTCTTCATCATCAGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000622665.1
ENST00000632717.1
CDS-3UTR TCA 90 bp GGACCTGTAAGCCATATCCAGGGACTTTGGACAAAACAGGGGAGGAATTTGCCAAAGGGAATTGGCACCTaGTGGGGCAAAGATAGAGCC +
Preference number: 4 (lower is better)
Translates to: GPVSHIQGLWTKQGRNLPKGIGT*WGKDRA
Trigger: GGCTCTATCTTTGCCCCATCAGGTGCCAATTCCCTT...TGGCAAATTCCTCCCCTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR TCA 90 bp ACTCTAGCATTAGATGGCAAGCTCTGTGGGCACTGGGCCCATGTTCAAGTGTTCTCAAGTGTTCATCACTaGATGCCCAGTACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: TLALDGKLCGHWAHVQVFSSVHH*MPSTWQ
Trigger: CTGCCAGGTACTGGGCATTCAGTGATGAACACTTGA...GAACACTTGAACATGGGCCCAGTGCCCACAGAGCTTGCCATCTAATGCTAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619462.4
ENST00000631509.1
ENST00000633854.1
CDS-3UTR TCA 90 bp CTGCAGAGAGTTTTCTGGTGTATCCGGGAGCATGTCGCCTTTGGTAGACCTCTTTCAAGTGTTCATCACTaGATGCCCAGTACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LQRVFWCIREHVAFGRPLSSVHH*MPSTWQ
Trigger: CTGCCAGGTACTGGGCATTCAGTGATGAACACTTGA...AAGAGGTCTACCAAAGGCGACATGCTCCCGGATACACCAGAAAACTCTCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619462.4
ENST00000631509.1
ENST00000633854.1
CDS-3UTR TCA 90 bp CCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGCTTGCCATCTTCTTCTGTaGTCTCCCTGCACTGTGCTC +
Preference number: 4 (lower is better)
Translates to: PRCWNDHYSSFCAYVSCACHLLL*SPCTVL
Trigger: GAGCACAGTGCAGGGAGATCACAGAAGAAGATGGCA...AGCACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR TCA 90 bp ACGGTTCACCATCCCACCAGGACCCTGGTACATCCAGTCCAACTTTTCTTCTTTTGCCATCTTCTTCTGTaGTCTCCCTGCACTGTGCTC +
Preference number: 4 (lower is better)
Translates to: TVHHPTRTLVHPVQLFFFCHLLL*SPCTVL
Trigger: GAGCACAGTGCAGGGAGATCACAGAAGAAGATGGCA...AAAGAAGAAAAGTTGGACTGGATGTACCAGGGTCCTGGTGGGATGGTGAACCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR TCA 90 bp GCACAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAAACTGTTTCAGGACTCAATaGAGCAGGGTCACTTTGAAC +
Preference number: 4 (lower is better)
Translates to: AQALPPRWSSAHPLKSQNCFRTQ*SRVTLN
Trigger: GTTCAAAGTGACCCTGCTTCATTGAGTCCTGAAACA...GTTTTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
CDS-3UTR TCA 90 bp GCACAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAAACAGCTCTCAAAGGAAGTaGGCTGTTTCAGGACTCAAT +
Preference number: 4 (lower is better)
Translates to: AQALPPRWSSAHPLKSQNSSQRK*AVSGLN
Trigger: ATTGAGTCCTGAAACAGCTCACTTCCTTTGAGAGCT...GTTTTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
CDS-3UTR TCA 90 bp TTGGCACCTGATGGGGCAAAGATAGAGCCTGGGAGAAGTCCTGTTTCAGAAGAGTGTACGCTGAGGCAGTaGAATAGGTCTGTTGGCACA +
Preference number: 4 (lower is better)
Translates to: LAPDGAKIEPGRSPVSEECTLRQ*NRSVGT
Trigger: TGTGCCAACAGACCTATTTCACTGCCTCAGCGTACA...CTCTTCTGAAACAGGACTTCTCCCAGGCTCTATCTTTGCCCCATCAGGTGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR GCA 90 bp AGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAGGGACCGTGACCTTCTaGCCAGGGATCGAGACCTCC +
Preference number: 4 (lower is better)
Translates to: RERSGFKHYSAWHHKCSKGTVTF*PGIETS
Trigger: GGAGGTCTCGATCCCTGGGCAGAAGGTCACGGTCCC...TTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR GCA 90 bp TGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTGTGCTCATCCTCGCTaGTGGAACGATCACTACTCG +
Preference number: 4 (lower is better)
Translates to: CSSSLLERSLLELLCLCFCAHPR*WNDHYS
Trigger: CGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACA...GAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR GCA 90 bp GGTCAGAGTTCCGGACCTGTAAGCCATATCCAGGGACTTTGGACAAAACAGGGGTTCACCTTAGAGTTGTaGAGTTTGCTGGGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: GQSSGPVSHIQGLWTKQGFTLEL*SLLGLG
Trigger: CCCAAGACCCAGCAAACTGCACAACTCTAAGGTGAA...CCCCTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCCGGAACTCTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR GCA 90 bp CTCCTCCTAAACCAGCCAGATTCAGAGAGAAAAACGAGCTGGCCTGCCTTATTGTCAGCCTCATGCTTCTaGTCGGCCTTCCACACTTTC +
Preference number: 4 (lower is better)
Translates to: LLLNQPDSERKTSWPALLSASCF*SAFHTF
Trigger: GAAAGTGTGGAAGGCCGAGCAGAAGCATGAGGCTGA...CAATAAGGCAGGCCAGCTCGTTTTTCTCTCTGAATCTGGCTGGTTTAGGAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR GCA 90 bp TACGGTCAGAGTTCCGGACCTGTAAGCCATATCCAGGGACTTTGGACAAAACAGTCAGCCTCATGCTTCTaGTCGGCCTTCCACACTTTC +
Preference number: 4 (lower is better)
Translates to: YGQSSGPVSHIQGLWTKQSASCF*SAFHTF
Trigger: GAAAGTGTGGAAGGCCGAGCAGAAGCATGAGGCTGA...CTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCCGGAACTCTGACCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR GCA 90 bp GAGTCAAAACCCAAAGTTACTGAGTGTCCCACAAAGCAAGTCACACTAGCTCTCATCGCCCAGCTAATGTaGGGGTCAAGAGGGCCTAGG +
Preference number: 4 (lower is better)
Translates to: ESKPKVTECPTKQVTLALIAQLM*GSRGPR
Trigger: CCTAGGCCCTCTTGACCCGCACATTAGCTGGGCGAT...GAGAGCTAGTGTGACTTGCTTTGTGGGACACTCAGTAACTTTGGGTTTTGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CCA 90 bp CTCCTGTTCACCTTAGAGTTGTGCAGTTTGCTGGGTCTTGGGGACCGTGACCTTCTTCTGGATCTGGAATaGTTCTTCATCCCATGCCCT +
Preference number: 4 (lower is better)
Translates to: LLFTLELCSLLGLGDRDLLLDLE*FFIPCP
Trigger: AGGGCATGGGATGAAGAACCATTCCAGATCCAGAAG...AAGGTCACGGTCCCCAAGACCCAGCAAACTGCACAACTCTAAGGTGAACAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR CCA 90 bp TTCACCTTAGAGTTGTGCAGTTTGCTGGGTCTTGGGGACCGTGACCTTCTGCCCAGGAGCTTCTGGATCTaGAATGGTTCTTCATCCCAT +
Preference number: 4 (lower is better)
Translates to: FTLELCSLLGLGDRDLLPRSFWI*NGSSSH
Trigger: ATGGGATGAAGAACCATTCCAGATCCAGAAGCTCCT...GGGCAGAAGGTCACGGTCCCCAAGACCCAGCAAACTGCACAACTCTAAGGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR CCA 90 bp TGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCATGGGGTGTGGATCTTaGCTCAGAGCTTCTCGAGTC +
Preference number: 4 (lower is better)
Translates to: CSSSLLERSLLELLCLCFMGCGS*LRASRV
Trigger: GACTCGAGAAGCTCTGAGCCAAGATCCACACCCCAT...GAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR CCA 90 bp TACGGTCAGAGTTCCGGACCTGTAAGCCATATCCAGGGACTTTGGACAAAACAGCCTCAACATGGGGTGTaGATCTTGGCTCAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: YGQSSGPVSHIQGLWTKQPQHGV*ILAQSF
Trigger: GAAGCTCTGAGCCAAGATCCACACCCCATGTTGAGG...CTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCCGGAACTCTGACCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR CCA 90 bp CACTGTGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATATCCCACCAGGACCCTaGTACATCCAGTCCAACTTT +
Preference number: 4 (lower is better)
Translates to: HCAHPRCWNDHYSSFCAYIPPGP*YIQSNF
Trigger: AAAGTTGGACTGGATGTACCAGGGTCCTGGTGGGAT...ATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR CCA 90 bp GGTCAGAGTTCCGGACCTGTAAGCCATATCCAGGGACTTTGGACAAAACAGGGGAAACATATTTGTCAATaGGGCGCCCCAGCAGGTACT +
Preference number: 4 (lower is better)
Translates to: GQSSGPVSHIQGLWTKQGKHICQ*GAPAGT
Trigger: AGTACCTGCTGGGGCGCCCCATTGACAAATATGTTT...CCCCTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCCGGAACTCTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR CCA 90 bp GGACCTGTAAGCCATATCCAGGGACTTTGGACAAAACAGGGGAGGAATTTGCCACCTGATGATGAAGAGTaGGTCCTCCCGGATCTTGCT +
Preference number: 4 (lower is better)
Translates to: GPVSHIQGLWTKQGRNLPPDDEE*VLPDLA
Trigger: AGCAAGATCCGGGAGGACCCACTCTTCATCATCAGG...TGGCAAATTCCTCCCCTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR CCA 90 bp CGTTTTCGCTCTAATTCCTCTGCAGAGAGTTTTCTGGTGTATCCGGGAGCATGTGCTCATCCTCGCTGCTaGAACGATCACTACTCGAGC +
Preference number: 4 (lower is better)
Translates to: RFRSNSSAESFLVYPGACAHPRC*NDHYSS
Trigger: GCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGC...ACATGCTCCCGGATACACCAGAAAACTCTCTGCAGAGGAATTAGAGCGAAAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR CCA 90 bp CTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGCTTGCTCATCCTCGCTGCTaGAACGATCACTACTCGAGC +
Preference number: 4 (lower is better)
Translates to: LAAGTITTRASVLMFLVLAHPRC*NDHYSS
Trigger: GCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGC...AAGCACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR CCA 90 bp CCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGCTGATGGGCTCCTAGTTTaGCCTGTCTCTCTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: PRCWNDHYSSFCAYVSCADGLLV*PVSLLF
Trigger: GAACAGGAGAGAGACAGGCCAAACTAGGAGCCCATC...AGCACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR CCA 90 bp TTCCTCTGCAGAGAGTTTTCTGGTGTATCCGGGAGCATGTCGCCTTTGGTAGACCTGCAGAGAGTTTTCTaGTGTATCCGGGAGCATGTC +
Preference number: 4 (lower is better)
Translates to: FLCREFSGVSGSMSPLVDLQRVF*CIREHV
Trigger: GACATGCTCCCGGATACACCAGAAAACTCTCTGCAG...GTCTACCAAAGGCGACATGCTCCCGGATACACCAGAAAACTCTCTGCAGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR CCA 90 bp GTGGGAGGAGCTTCTGGATCTGGAATGGTTCTTCATCCCATGCCCTCTCTTTTGCTGCAGAGAGTTTTCTaGTGTATCCGGGAGCATGTC +
Preference number: 4 (lower is better)
Translates to: VGGASGSGMVLHPMPSLLLQRVF*CIREHV
Trigger: GACATGCTCCCGGATACACCAGAAAACTCTCTGCAG...CAAAAGAGAGGGCATGGGATGAAGAACCATTCCAGATCCAGAAGCTCCTCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR CCA 90 bp ACTGTGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGCTCACTACGCGGATCTaGAAGATTTCGGGAGGATCA +
Preference number: 4 (lower is better)
Translates to: TVLILAAGTITTRASVLMLTTRI*KISGGS
Trigger: TGATCCTCCCGAAATCTTCCAGATCCGCGTAGTGAG...CATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000619299.4
ENST00000622665.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR CCA 90 bp AGTTGTGCAGTTTGCTGGGTCTTGGGGACCGTGACCTTCTGCCCAGGGATCGAGCACTTTGAACACTGGTaGTTTGACATCTGTGAAAGA +
Preference number: 4 (lower is better)
Translates to: SCAVCWVLGTVTFCPGIEHFEHW*FDICER
Trigger: TCTTTCACAGATGTCAAACCACCAGTGTTCAAAGTG...CTCGATCCCTGGGCAGAAGGTCACGGTCCCCAAGACCCAGCAAACTGCACAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CCA 90 bp CAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAAACCCATTACACTGCCTACATTaGAGACTGCAAGCAGTGGAA +
Preference number: 4 (lower is better)
Translates to: QALPPRWSSAHPLKSQNPLHCLH*RLQAVE
Trigger: TTCCACTGCTTGCAGTCTCCAATGTAGGCAGTGTAA...TGGGTTTTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CCA 90 bp GATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAACAGAAAAGCCTCCCGAGTAGCTaGGACTACAGGCGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: DRVSSITVPGIISVQKQKSLPSS*DYRRPP
Trigger: TGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCT...TTTCTGTTTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR CAA 72 bp TTCTTCCTGATGATGAAGAGTGGGTCCTCCCGGATCTaGCTGGCCATGTCAAGAAGGGAATTGGCACCTGAT +
Preference number: 4 (lower is better)
Translates to: FFLMMKSGSSRI*LAMSRRELAPD
Trigger: ATCAGGTGCCAATTCCCTTCTTGACATGGCCAGCAAGATCCGGGAGGACCCACTCTTCATCATCAGGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR TCA 90 bp AGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAGGCATGTCTTGGGGGTaGGTGGGAGGAGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: RERSGFKHYSAWHHKCSKGMSWG*VGGASG
Trigger: TCCAGAAGCTCCTCCCACTCACCCCCAAGACATGCC...TTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR TCA 90 bp TATGTTACATTCTCTAGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATGGCATGTCTTGGGGGTaGGTGGGAGGAGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: YVTFSRERSGFKHYSAWHGMSWG*VGGASG
Trigger: TCCAGAAGCTCCTCCCACTCACCCCCAAGACATGCC...ATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCTAGAGAATGTAACATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR TCA 90 bp TGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTCAAGTGTTCATCACTaGATGCCCAGTACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: CSSSLLERSLLELLCLCFSSVHH*MPSTWQ
Trigger: CTGCCAGGTACTGGGCATTCAGTGATGAACACTTGA...GAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618122.4
ENST00000631509.1
CDS-3UTR TCA 90 bp TTCACCTTAGAGTTGTGCAGTTTGCTGGGTCTTGGGGACCGTGACCTTCTGCCCTGCCATCTTCTTCTGTaGTATTTAGCATCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: FTLELCSLLGLGDRDLLPCHLLL*YLASPR
Trigger: CCTTGGAGATGCTAAATATCACAGAAGAAGATGGCA...GGGCAGAAGGTCACGGTCCCCAAGACCCAGCAAACTGCACAACTCTAAGGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619462.4
ENST00000631509.1
ENST00000633854.1
CDS-3UTR TCA 90 bp AGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAACTTTCTCCACATTCCTaGGGGTCTGCGGGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: RERSGFKHYSAWHHKCSKLSPHS*GSAGAS
Trigger: GCTGGCACCCGCAGACCCTCAGGAATGTGGAGAAAG...TTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR TCA 90 bp CAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAAACCCAGGCTTTGACCTAACCTaGCATCATTCTGTCACATTA +
Preference number: 4 (lower is better)
Translates to: QALPPRWSSAHPLKSQNPGFDLT*HHSVTL
Trigger: TAATGTGACAGAATGATGTCAGGTTAGGTCAAAGCC...TGGGTTTTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR TCA 90 bp ATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGATTTCCAAGATGACTTaGCGGCCCCAACATCCTCCG +
Preference number: 4 (lower is better)
Translates to: ILAAGTITTRASVLMFLVISKMT*RPQHPP
Trigger: CGGAGGATGTTGGGGCCGTCAAGTCATCTTGGAAAT...CACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000619299.4
ENST00000622665.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR TCA 90 bp CTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGCTTATTTCCAAGATGACTTaGCGGCCCCAACATCCTCCG +
Preference number: 4 (lower is better)
Translates to: LAAGTITTRASVLMFLVLISKMT*RPQHPP
Trigger: CGGAGGATGTTGGGGCCGTCAAGTCATCTTGGAAAT...AAGCACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000619299.4
ENST00000622665.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR GCA 90 bp GTGGGAGGAGCTTCTGGATCTGGAATGGTTCTTCATCCCATGCCCTCTCTTTTGTGGTTCTTCATCCCATaGCCTCTCTTTTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: VGGASGSGMVLHPMPSLLWFFIP*PLFCSA
Trigger: AGCAGAGCAAAAGAGAGGGCATGGGATGAAGAACCA...CAAAAGAGAGGGCATGGGATGAAGAACCATTCCAGATCCAGAAGCTCCTCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR GCA 90 bp CGTTTTCGCTCTAATTCCTCTGCAGAGAGTTTTCTGGTGTATCCGGGAGCATGTTGTGCTCATCCTCGCTaGTGGAACGATCACTACTCG +
Preference number: 4 (lower is better)
Translates to: RFRSNSSAESFLVYPGACCAHPR*WNDHYS
Trigger: CGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACA...ACATGCTCCCGGATACACCAGAAAACTCTCTGCAGAGGAATTAGAGCGAAAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR GCA 90 bp GCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGCTTCTTACATGCTCACCTCCCTaGACTGTGCTCATCCTCGCT +
Preference number: 4 (lower is better)
Translates to: AAGTITTRASVLMFLVLLTCSPP*TVLILA
Trigger: AGCGAGGATGAGCACAGTGCAGGGAGGTGAGCATGT...AAGAAGCACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000622665.1
ENST00000631509.1
ENST00000632717.1
CDS-3UTR GCA 90 bp GGATCTTGGCTCAGAGCTTCTCGAGTCTCCTTTACAGAGTCTTTATATTATGCTAGGCCAGTCGCCACATaGTCACCTCCCTGCACTGTG +
Preference number: 4 (lower is better)
Translates to: GSWLRASRVSFTESLYYARPVAT*SPPCTV
Trigger: CACAGTGCAGGGAGGTGAGCATGTGGCGACTGGCCT...AGCATAATATAAAGACTCTGTAAAGGAGACTCGAGAAGCTCTGAGCCAAGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000622665.1
ENST00000631509.1
ENST00000632717.1
CDS-3UTR GCA 90 bp CCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGCTGTGTTCATCACTGAATaGCCAGTACCTGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: PRCWNDHYSSFCAYVSCAVFITE*PVPGSF
Trigger: GAAGCTGCCAGGTACTGGGCATTCAGTGATGAACAC...AGCACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618122.4
ENST00000631509.1
CDS-3UTR GCA 90 bp GTGGGAGGAGCTTCTGGATCTGGAATGGTTCTTCATCCCATGCCCTCTCTTTTGTTCACCTTAGAGTTGTaGAGTTTGCTGGGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: VGGASGSGMVLHPMPSLLFTLEL*SLLGLG
Trigger: CCCAAGACCCAGCAAACTGCACAACTCTAAGGTGAA...CAAAAGAGAGGGCATGGGATGAAGAACCATTCCAGATCCAGAAGCTCCTCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR GCA 90 bp ATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGTCAGCCTCATGCTTCTaGTCGGCCTTCCACACTTTC +
Preference number: 4 (lower is better)
Translates to: ILAAGTITTRASVLMFLVSASCF*SAFHTF
Trigger: GAAAGTGTGGAAGGCCGAGCAGAAGCATGAGGCTGA...CACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000619299.4
ENST00000622665.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR GCA 90 bp CATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTACCGAGATGGTCCAGTaGCCACCCGTTAAAGAGTCA +
Preference number: 4 (lower is better)
Translates to: HPRCWNDHYSSFCAYVSCTEMVQ*PPVKES
Trigger: TGACTCTTTAACGGGTGGGCACTGGACCATCTCGGT...ACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CCA 90 bp GTGGGAGGAGCTTCTGGATCTGGAATGGTTCTTCATCCCATGCCCTCTCTTTTGCTTCTGGATCTGGAATaGTTCTTCATCCCATGCCCT +
Preference number: 4 (lower is better)
Translates to: VGGASGSGMVLHPMPSLLLLDLE*FFIPCP
Trigger: AGGGCATGGGATGAAGAACCATTCCAGATCCAGAAG...CAAAAGAGAGGGCATGGGATGAAGAACCATTCCAGATCCAGAAGCTCCTCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR CCA 90 bp CTCCTGTTCACCTTAGAGTTGTGCAGTTTGCTGGGTCTTGGGGACCGTGACCTTAGGAGCTTCTGGATCTaGAATGGTTCTTCATCCCAT +
Preference number: 4 (lower is better)
Translates to: LLFTLELCSLLGLGDRDLRSFWI*NGSSSH
Trigger: ATGGGATGAAGAACCATTCCAGATCCAGAAGCTCCT...AAGGTCACGGTCCCCAAGACCCAGCAAACTGCACAACTCTAAGGTGAACAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR CCA 90 bp CTTCCTGATGATGAAGAGTGGGTCCTCCCGGATCTTGCTGGCCATGTCAAGAAGAGGAGCTTCTGGATCTaGAATGGTTCTTCATCCCAT +
Preference number: 4 (lower is better)
Translates to: LPDDEEWVLPDLAGHVKKRSFWI*NGSSSH
Trigger: ATGGGATGAAGAACCATTCCAGATCCAGAAGCTCCT...CTTCTTGACATGGCCAGCAAGATCCGGGAGGACCCACTCTTCATCATCAGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR CCA 90 bp CGGACCTGTAAGCCATATCCAGGGACTTTGGACAAAACAGGGGAGGAATTTGCCAGTGGGAGGAGCTTCTaGATCTGGAATGGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: RTCKPYPGTLDKTGEEFASGRSF*IWNGSS
Trigger: TGAAGAACCATTCCAGATCCAGAAGCTCCTCCCACT...GGCAAATTCCTCCCCTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR CCA 90 bp TACGGTCAGAGTTCCGGACCTGTAAGCCATATCCAGGGACTTTGGACAAAACAGATCCCACCAGGACCCTaGTACATCCAGTCCAACTTT +
Preference number: 4 (lower is better)
Translates to: YGQSSGPVSHIQGLWTKQIPPGP*YIQSNF
Trigger: AAAGTTGGACTGGATGTACCAGGGTCCTGGTGGGAT...CTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCCGGAACTCTGACCGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR CCA 90 bp GGTTACGGTCAGAGTTCCGGACCTGTAAGCCATATCCAGGGACTTTGGACAAAAATCCCACCAGGACCCTaGTACATCCAGTCCAACTTT +
Preference number: 4 (lower is better)
Translates to: GYGQSSGPVSHIQGLWTKIPPGP*YIQSNF
Trigger: AAAGTTGGACTGGATGTACCAGGGTCCTGGTGGGAT...TTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCCGGAACTCTGACCGTAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR CCA 90 bp TTGGCACCTGATGGGGCAAAGATAGAGCCTGGGAGAAGTCCTGTTTCAGAAGAGAAACATATTTGTCAATaGGGCGCCCCAGCAGGTACT +
Preference number: 4 (lower is better)
Translates to: LAPDGAKIEPGRSPVSEEKHICQ*GAPAGT
Trigger: AGTACCTGCTGGGGCGCCCCATTGACAAATATGTTT...CTCTTCTGAAACAGGACTTCTCCCAGGCTCTATCTTTGCCCCATCAGGTGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR CCA 90 bp TTGGCACCTGATGGGGCAAAGATAGAGCCTGGGAGAAGTCCTGTTTCAGAAGAGGGCAAAGATAGAGCCTaGGAGAAGTCCTGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: LAPDGAKIEPGRSPVSEEGKDRA*EKSCFR
Trigger: TCTGAAACAGGACTTCTCCCAGGCTCTATCTTTGCC...CTCTTCTGAAACAGGACTTCTCCCAGGCTCTATCTTTGCCCCATCAGGTGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR CCA 90 bp ACTGTGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTGTCAAGAAGGGAATTaGCACCTGATGGGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: TVLILAAGTITTRASVLMCQEGN*HLMGQR
Trigger: TCTTTGCCCCATCAGGTGCCAATTCCCTTCTTGACA...CATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR CCA 90 bp ATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGCCTGATGATGAAGAGTaGGTCCTCCCGGATCTTGCT +
Preference number: 4 (lower is better)
Translates to: ILAAGTITTRASVLMFLVPDDEE*VLPDLA
Trigger: AGCAAGATCCGGGAGGACCCACTCTTCATCATCAGG...CACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR CCA 90 bp GAGTCAAAACCCAAAGTTACTGAGTGTCCCACAAAGCAAGTCACACTAGCTCTCAGTTGTGCAGTTTGCTaGGTCTTGGGGACCGTGACC +
Preference number: 4 (lower is better)
Translates to: ESKPKVTECPTKQVTLALSCAVC*VLGTVT
Trigger: GGTCACGGTCCCCAAGACCCAGCAAACTGCACAACT...GAGAGCTAGTGTGACTTGCTTTGTGGGACACTCAGTAACTTTGGGTTTTGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CCA 90 bp TACGGTCAGAGTTCCGGACCTGTAAGCCATATCCAGGGACTTTGGACAAAACAGCTCACTACGCGGATCTaGAAGATTTCGGGAGGATCA +
Preference number: 4 (lower is better)
Translates to: YGQSSGPVSHIQGLWTKQLTTRI*KISGGS
Trigger: TGATCCTCCCGAAATCTTCCAGATCCGCGTAGTGAG...CTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCCGGAACTCTGACCGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CCA 90 bp CACGGTTCACCATCCCACCAGGACCCTGGTACATCCAGTCCAACTTTTCTTCTTCCTCCTCCCTCCATTTaGCGTTTTCCATCATCTCTT +
Preference number: 4 (lower is better)
Translates to: HGSPSHQDPGTSSPTFLLPPPSI*RFPSSL
Trigger: AAGAGATGATGGAAAACGCCAAATGGAGGGAGGAGG...AAGAAGAAAAGTTGGACTGGATGTACCAGGGTCCTGGTGGGATGGTGAACCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CCA 90 bp CCTGCACTGTGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCCACTTTGAACACTGGTaGTTTGACATCTGTGAAAGA +
Preference number: 4 (lower is better)
Translates to: PALCSSSLLERSLLELLCHFEHW*FDICER
Trigger: TCTTTCACAGATGTCAAACCACCAGTGTTCAAAGTG...GCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGTGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CCA 90 bp TATGTTACATTCTCTAGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATGCACTCCCACCGAGATaGTCCAGTGCCCACCCGTTA +
Preference number: 4 (lower is better)
Translates to: YVTFSRERSGFKHYSAWHALPPR*SSAHPL
Trigger: TAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGC...ATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCTAGAGAATGTAACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CCA 90 bp CAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAAACCCAGAGAGAAAAACGAGCTaGCCTGCCTTATTGTATTAC +
Preference number: 4 (lower is better)
Translates to: QALPPRWSSAHPLKSQNPERKTS*PALLYY
Trigger: GTAATACAATAAGGCAGGCCAGCTCGTTTTTCTCTC...TGGGTTTTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR TCA 90 bp TTCCGGACCTGTAAGCCATATCCAGGGACTTTGGACAAAACAGGGGAGGAATTTTCAAGTGTTCATCACTaGATGCCCAGTACCTGGCAG +
Preference number: 4 (lower is better)
Translates to: FRTCKPYPGTLDKTGEEFSSVHH*MPSTWQ
Trigger: CTGCCAGGTACTGGGCATTCAGTGATGAACACTTGA...AAATTCCTCCCCTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCCGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619462.4
ENST00000631509.1
ENST00000633854.1
CDS-3UTR TCA 90 bp GGCAAAGATAGAGCCTGGGAGAAGTCCTGTTTCAGAAGAGCAGCCTGCCTCCTTTGCCATCTTCTTCTGTaGTATTTAGCATCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: GKDRAWEKSCFRRAACLLCHLLL*YLASPR
Trigger: CCTTGGAGATGCTAAATATCACAGAAGAAGATGGCA...AAGGAGGCAGGCTGCTCTTCTGAAACAGGACTTCTCCCAGGCTCTATCTTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618122.4
ENST00000631509.1
CDS-3UTR TCA 90 bp CGGACCTGTAAGCCATATCCAGGGACTTTGGACAAAACAGGGGAGGAATTTGCCAGCTCTCAAAGGAAGTaGGCTGTTTCAGGACTCAAT +
Preference number: 4 (lower is better)
Translates to: RTCKPYPGTLDKTGEEFASSQRK*AVSGLN
Trigger: ATTGAGTCCTGAAACAGCTCACTTCCTTTGAGAGCT...GGCAAATTCCTCCCCTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR TCA 90 bp CACTGTGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATAGCTCTCAAAGGAAGTaGGCTGTTTCAGGACTCAAT +
Preference number: 4 (lower is better)
Translates to: HCAHPRCWNDHYSSFCAYSSQRK*AVSGLN
Trigger: ATTGAGTCCTGAAACAGCTCACTTCCTTTGAGAGCT...ATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR GCA 90 bp TTAGATGGCAAGCTCTGTGGGCACTGGGCCCATGTTCAAGTGTTCATCACTGAATGGTTCTTCATCCCATaGCCTCTCTTTTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LDGKLCGHWAHVQVFITEWFFIP*PLFCSA
Trigger: AGCAGAGCAAAAGAGAGGGCATGGGATGAAGAACCA...TTCAGTGATGAACACTTGAACATGGGCCCAGTGCCCACAGAGCTTGCCATCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618122.4
ENST00000631509.1
CDS-3UTR GCA 90 bp AGTGGGAGGAGCTTCTGGATCTGGAATGGTTCTTCATCCCATGCCCTCTCTTTTTGGTTCTTCATCCCATaGCCTCTCTTTTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SGRSFWIWNGSSSHALSFWFFIP*PLFCSA
Trigger: AGCAGAGCAAAAGAGAGGGCATGGGATGAAGAACCA...AAAAGAGAGGGCATGGGATGAAGAACCATTCCAGATCCAGAAGCTCCTCCCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR GCA 90 bp CTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGCTTCTTTTTCCCCTGGTGCTCTTCTTaGTGGCATGTCTTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: LERSLLELLCLCFLCFFFPWCSS*WHVLGV
Trigger: CACCCCCAAGACATGCCAGCAAGAAGAGCACCAGGG...GAAAAAGAAGCACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR GCA 90 bp GGATCTTGGCTCAGAGCTTCTCGAGTCTCCTTTACAGAGTCTTTATATTATGCTCCCTGGTGCTCTTCTTaGTGGCATGTCTTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: GSWLRASRVSFTESLYYAPWCSS*WHVLGV
Trigger: CACCCCCAAGACATGCCAGCAAGAAGAGCACCAGGG...AGCATAATATAAAGACTCTGTAAAGGAGACTCGAGAAGCTCTGAGCCAAGATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR GCA 90 bp TTAGATGGCAAGCTCTGTGGGCACTGGGCCCATGTTCAAGTGTTCATCACTGAATTCACCTTAGAGTTGTaGAGTTTGCTGGGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: LDGKLCGHWAHVQVFITEFTLEL*SLLGLG
Trigger: CCCAAGACCCAGCAAACTGCACAACTCTAAGGTGAA...TTCAGTGATGAACACTTGAACATGGGCCCAGTGCCCACAGAGCTTGCCATCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618122.4
ENST00000631509.1
CDS-3UTR GCA 90 bp AGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAATTCCGCTCAGCCTCATaGTTCTGCTCGGCCTTCCAC +
Preference number: 4 (lower is better)
Translates to: RERSGFKHYSAWHHKCSKFRSAS*FCSAFH
Trigger: GTGGAAGGCCGAGCAGAAGCATGAGGCTGAGCGGAA...TTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR GCA 90 bp CTGCACTGTGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTTTTCCATCATCTCTTaGCGTTTTCGCTCTAATTCC +
Preference number: 4 (lower is better)
Translates to: LHCAHPRCWNDHYSSFCAFSIIS*RFRSNS
Trigger: GGAATTAGAGCGAAAACGGCAAGAGATGATGGAAAA...AGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGTGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR GCA 90 bp GAGTCAAAACCCAAAGTTACTGAGTGTCCCACAAAGCAAGTCACACTAGCTCTCACCGAGATGGTCCAGTaGCCACCCGTTAAAGAGTCA +
Preference number: 4 (lower is better)
Translates to: ESKPKVTECPTKQVTLALTEMVQ*PPVKES
Trigger: TGACTCTTTAACGGGTGGGCACTGGACCATCTCGGT...GAGAGCTAGTGTGACTTGCTTTGTGGGACACTCAGTAACTTTGGGTTTTGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
CDS-3UTR GCA 90 bp CAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAAACCCAACTATACCTTTACACTaGCTACATTGGAGACTGCAA +
Preference number: 4 (lower is better)
Translates to: QALPPRWSSAHPLKSQNPTIPLH*LHWRLQ
Trigger: TTGCAGTCTCCAATGTAGGCAGTGTAAAGGTATAGT...TGGGTTTTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR GCA 90 bp AGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAACAATCTCGGCTCACTaGAAGCTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: RERSGFKHYSAWHHKCSKTISAH*KLRLLG
Trigger: ACCCAGGAGGCGGAGCTTGCAGTGAGCCGAGATTGT...TTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CCA 90 bp GAGTGGGAGGAGCTTCTGGATCTGGAATGGTTCTTCATCCCATGCCCTCTCTTTAGGAGCTTCTGGATCTaGAATGGTTCTTCATCCCAT +
Preference number: 4 (lower is better)
Translates to: EWEELLDLEWFFIPCPLFRSFWI*NGSSSH
Trigger: ATGGGATGAAGAACCATTCCAGATCCAGAAGCTCCT...AAAGAGAGGGCATGGGATGAAGAACCATTCCAGATCCAGAAGCTCCTCCCACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR CCA 90 bp CTCCTCCTAAACCAGCCAGATTCAGAGAGAAAAACGAGCTGGCCTGCCTTATTGAGTGGGAGGAGCTTCTaGATCTGGAATGGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LLLNQPDSERKTSWPALLSGRSF*IWNGSS
Trigger: TGAAGAACCATTCCAGATCCAGAAGCTCCTCCCACT...CAATAAGGCAGGCCAGCTCGTTTTTCTCTCTGAATCTGGCTGGTTTAGGAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CCA 90 bp CCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGCTAGTGGGAGGAGCTTCTaGATCTGGAATGGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: PRCWNDHYSSFCAYVSCASGRSF*IWNGSS
Trigger: TGAAGAACCATTCCAGATCCAGAAGCTCCTCCCACT...AGCACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR CCA 90 bp TACGGTCAGAGTTCCGGACCTGTAAGCCATATCCAGGGACTTTGGACAAAACAGAGTGGGAGGAGCTTCTaGATCTGGAATGGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: YGQSSGPVSHIQGLWTKQSGRSF*IWNGSS
Trigger: TGAAGAACCATTCCAGATCCAGAAGCTCCTCCCACT...CTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCCGGAACTCTGACCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR CCA 90 bp CTCCTCCTAAACCAGCCAGATTCAGAGAGAAAAACGAGCTGGCCTGCCTTATTGAAACATATTTGTCAATaGGGCGCCCCAGCAGGTACT +
Preference number: 4 (lower is better)
Translates to: LLLNQPDSERKTSWPALLKHICQ*GAPAGT
Trigger: AGTACCTGCTGGGGCGCCCCATTGACAAATATGTTT...CAATAAGGCAGGCCAGCTCGTTTTTCTCTCTGAATCTGGCTGGTTTAGGAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CCA 90 bp ACGGTTCACCATCCCACCAGGACCCTGGTACATCCAGTCCAACTTTTCTTCTTTAAACATATTTGTCAATaGGGCGCCCCAGCAGGTACT +
Preference number: 4 (lower is better)
Translates to: TVHHPTRTLVHPVQLFFFKHICQ*GAPAGT
Trigger: AGTACCTGCTGGGGCGCCCCATTGACAAATATGTTT...AAAGAAGAAAAGTTGGACTGGATGTACCAGGGTCCTGGTGGGATGGTGAACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR CCA 90 bp ACGGTTCACCATCCCACCAGGACCCTGGTACATCCAGTCCAACTTTTCTTCTTTGGCAAAGATAGAGCCTaGGAGAAGTCCTGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: TVHHPTRTLVHPVQLFFFGKDRA*EKSCFR
Trigger: TCTGAAACAGGACTTCTCCCAGGCTCTATCTTTGCC...AAAGAAGAAAAGTTGGACTGGATGTACCAGGGTCCTGGTGGGATGGTGAACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR CCA 90 bp ACGGTTCACCATCCCACCAGGACCCTGGTACATCCAGTCCAACTTTTCTTCTTTTGTCAAGAAGGGAATTaGCACCTGATGGGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: TVHHPTRTLVHPVQLFFFCQEGN*HLMGQR
Trigger: TCTTTGCCCCATCAGGTGCCAATTCCCTTCTTGACA...AAAGAAGAAAAGTTGGACTGGATGTACCAGGGTCCTGGTGGGATGGTGAACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR CCA 90 bp CTCCTCCTAAACCAGCCAGATTCAGAGAGAAAAACGAGCTGGCCTGCCTTATTGCCTCCTCCCTCCATTTaGCGTTTTCCATCATCTCTT +
Preference number: 4 (lower is better)
Translates to: LLLNQPDSERKTSWPALLPPPSI*RFPSSL
Trigger: AAGAGATGATGGAAAACGCCAAATGGAGGGAGGAGG...CAATAAGGCAGGCCAGCTCGTTTTTCTCTCTGAATCTGGCTGGTTTAGGAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR CAA 72 bp TCAGAGTTCCGGACCTGTAAGCCATATCCAGGGACTTaGGACAAAACAGGGGAGGAATTTGCCATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SEFRTCKPYPGT*DKTGEEFAIFF
Trigger: GAAGAAGATGGCAAATTCCTCCCCTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCCGGAACTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR TCA 90 bp GAGTGGGAGGAGCTTCTGGATCTGGAATGGTTCTTCATCCCATGCCCTCTCTTTTGCCATCTTCTTCTGTaGTATTTAGCATCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: EWEELLDLEWFFIPCPLFCHLLL*YLASPR
Trigger: CCTTGGAGATGCTAAATATCACAGAAGAAGATGGCA...AAAGAGAGGGCATGGGATGAAGAACCATTCCAGATCCAGAAGCTCCTCCCACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619462.4
ENST00000631509.1
ENST00000633854.1
CDS-3UTR TCA 90 bp CCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGCTTGTTTCAGGACTCAATaGAGCAGGGTCACTTTGAAC +
Preference number: 4 (lower is better)
Translates to: PRCWNDHYSSFCAYVSCACFRTQ*SRVTLN
Trigger: GTTCAAAGTGACCCTGCTTCATTGAGTCCTGAAACA...AGCACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR GCA 90 bp CTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGCTTCTTTTTCCCATGCCCTCTCTTTTaGTCTGCTGTCAGAGGACCC +
Preference number: 4 (lower is better)
Translates to: LERSLLELLCLCFLCFFFPCPLF*SAVRGP
Trigger: GGGTCCTCTGACAGCAGAGCAAAAGAGAGGGCATGG...GAAAAAGAAGCACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR GCA 90 bp CTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGCTTTGGTTCTTCATCCCATaGCCTCTCTTTTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LAAGTITTRASVLMFLVLWFFIP*PLFCSA
Trigger: AGCAGAGCAAAAGAGAGGGCATGGGATGAAGAACCA...AAGCACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR GCA 90 bp GAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAACACCCTGGTGCTCTTCTTaGTGGCATGTCTTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: ERSGFKHYSAWHHKCSKTPWCSS*WHVLGV
Trigger: CACCCCCAAGACATGCCAGCAAGAAGAGCACCAGGG...TGTTTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR GCA 90 bp GGATCTTGGCTCAGAGCTTCTCGAGTCTCCTTTACAGAGTCTTTATATTATGCTACCCTGCTTCCCTGGTaGTCTTCTTGCTGGCATGTC +
Preference number: 4 (lower is better)
Translates to: GSWLRASRVSFTESLYYATLLPW*SSCWHV
Trigger: GACATGCCAGCAAGAAGAGCACCAGGGAAGCAGGGT...AGCATAATATAAAGACTCTGTAAAGGAGACTCGAGAAGCTCTGAGCCAAGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR GCA 90 bp GAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAACAGGTCCTCCCGGATCTTaGTGGCCATGTCAAGAAGGG +
Preference number: 4 (lower is better)
Translates to: ERSGFKHYSAWHHKCSKTGPPGS*WPCQEG
Trigger: CCCTTCTTGACATGGCCAGCAAGATCCGGGAGGACC...TGTTTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR GCA 90 bp GATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAACAGAAAGGTCCTCCCGGATCTTaGTGGCCATGTCAAGAAGGG +
Preference number: 4 (lower is better)
Translates to: DRVSSITVPGIISVQKQKGPPGS*WPCQEG
Trigger: CCCTTCTTGACATGGCCAGCAAGATCCGGGAGGACC...TTTCTGTTTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR GCA 90 bp CTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGCTTCTTTTTCACATGCTCACCTCCCTaGACTGTGCTCATCCTCGCT +
Preference number: 4 (lower is better)
Translates to: LERSLLELLCLCFLCFFFTCSPP*TVLILA
Trigger: AGCGAGGATGAGCACAGTGCAGGGAGGTGAGCATGT...GAAAAAGAAGCACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000622665.1
ENST00000631509.1
ENST00000632717.1
CDS-3UTR GCA 90 bp TATTTAGCATCTCCAAGGAACTCTAGCATTAGATGGCAAGCTCTGTGGGCACTGGTGTTCATCACTGAATaGCCAGTACCTGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: YLASPRNSSIRWQALWALVFITE*PVPGSF
Trigger: GAAGCTGCCAGGTACTGGGCATTCAGTGATGAACAC...CAGTGCCCACAGAGCTTGCCATCTAATGCTAGAGTTCCTTGGAGATGCTAAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619462.4
ENST00000631509.1
ENST00000633854.1
CDS-3UTR GCA 90 bp GCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGCTTCTTGTGTTCATCACTGAATaGCCAGTACCTGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: AAGTITTRASVLMFLVLLVFITE*PVPGSF
Trigger: GAAGCTGCCAGGTACTGGGCATTCAGTGATGAACAC...AAGAAGCACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618122.4
ENST00000631509.1
CDS-3UTR GCA 90 bp CTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGCTTCTTTCAGGGAGGAAGTAGATaGACTCTCCAGCTTCATGCG +
Preference number: 4 (lower is better)
Translates to: LLERSLLELLCLCFLCFFQGGSR*TLQLHA
Trigger: CGCATGAAGCTGGAGAGTGCATCTACTTCCTCCCTG...AAAGAAGCACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CCA 90 bp AGTGGGAGGAGCTTCTGGATCTGGAATGGTTCTTCATCCCATGCCCTCTCTTTTCATATCCAGGGACTTTaGACAAAACAGGGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: SGRSFWIWNGSSSHALSFHIQGL*TKQGRN
Trigger: ATTCCTCCCCTGTTTTGTCCAAAGTCCCTGGATATG...AAAAGAGAGGGCATGGGATGAAGAACCATTCCAGATCCAGAAGCTCCTCCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR CCA 90 bp GGTTACGGTCAGAGTTCCGGACCTGTAAGCCATATCCAGGGACTTTGGACAAAACATATCCAGGGACTTTaGACAAAACAGGGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: GYGQSSGPVSHIQGLWTKHIQGL*TKQGRN
Trigger: ATTCCTCCCCTGTTTTGTCCAAAGTCCCTGGATATG...TTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCCGGAACTCTGACCGTAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR CCA 90 bp CGTTTTCGCTCTAATTCCTCTGCAGAGAGTTTTCTGGTGTATCCGGGAGCATGTCTTCTGGATCTGGAATaGTTCTTCATCCCATGCCCT +
Preference number: 4 (lower is better)
Translates to: RFRSNSSAESFLVYPGACLLDLE*FFIPCP
Trigger: AGGGCATGGGATGAAGAACCATTCCAGATCCAGAAG...ACATGCTCCCGGATACACCAGAAAACTCTCTGCAGAGGAATTAGAGCGAAAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR CCA 90 bp CCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGCTAGGAGCTTCTGGATCTaGAATGGTTCTTCATCCCAT +
Preference number: 4 (lower is better)
Translates to: PRCWNDHYSSFCAYVSCARSFWI*NGSSSH
Trigger: ATGGGATGAAGAACCATTCCAGATCCAGAAGCTCCT...AGCACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR CCA 90 bp GGACCTGTAAGCCATATCCAGGGACTTTGGACAAAACAGGGGAGGAATTTGCCAAGGAGCTTCTGGATCTaGAATGGTTCTTCATCCCAT +
Preference number: 4 (lower is better)
Translates to: GPVSHIQGLWTKQGRNLPRSFWI*NGSSSH
Trigger: ATGGGATGAAGAACCATTCCAGATCCAGAAGCTCCT...TGGCAAATTCCTCCCCTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR CCA 90 bp CATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTAGTGGGAGGAGCTTCTaGATCTGGAATGGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: HPRCWNDHYSSFCAYVSCSGRSF*IWNGSS
Trigger: TGAAGAACCATTCCAGATCCAGAAGCTCCTCCCACT...ACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR CCA 90 bp GAGTCAAAACCCAAAGTTACTGAGTGTCCCACAAAGCAAGTCACACTAGCTCTCATCCCACCAGGACCCTaGTACATCCAGTCCAACTTT +
Preference number: 4 (lower is better)
Translates to: ESKPKVTECPTKQVTLALIPPGP*YIQSNF
Trigger: AAAGTTGGACTGGATGTACCAGGGTCCTGGTGGGAT...GAGAGCTAGTGTGACTTGCTTTGTGGGACACTCAGTAACTTTGGGTTTTGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CCA 90 bp ATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGGGCAAAGATAGAGCCTaGGAGAAGTCCTGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: ILAAGTITTRASVLMFLVGKDRA*EKSCFR
Trigger: TCTGAAACAGGACTTCTCCCAGGCTCTATCTTTGCC...CACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR CCA 90 bp TATGTTACATTCTCTAGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATGCTCATCCTCGCTGCTaGAACGATCACTACTCGAGC +
Preference number: 4 (lower is better)
Translates to: YVTFSRERSGFKHYSAWHAHPRC*NDHYSS
Trigger: GCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGC...ATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCTAGAGAATGTAACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CCA 90 bp GAGTCAAAACCCAAAGTTACTGAGTGTCCCACAAAGCAAGTCACACTAGCTCTCCTGCAGAGAGTTTTCTaGTGTATCCGGGAGCATGTC +
Preference number: 4 (lower is better)
Translates to: ESKPKVTECPTKQVTLALLQRVF*CIREHV
Trigger: GACATGCTCCCGGATACACCAGAAAACTCTCTGCAG...GAGAGCTAGTGTGACTTGCTTTGTGGGACACTCAGTAACTTTGGGTTTTGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CCA 90 bp GAGTCAAAACCCAAAGTTACTGAGTGTCCCACAAAGCAAGTCACACTAGCTCTCCTCACTACGCGGATCTaGAAGATTTCGGGAGGATCA +
Preference number: 4 (lower is better)
Translates to: ESKPKVTECPTKQVTLALLTTRI*KISGGS
Trigger: TGATCCTCCCGAAATCTTCCAGATCCGCGTAGTGAG...GAGAGCTAGTGTGACTTGCTTTGTGGGACACTCAGTAACTTTGGGTTTTGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CCA 90 bp CATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTCCTCCTCCCTCCATTTaGCGTTTTCCATCATCTCTT +
Preference number: 4 (lower is better)
Translates to: HPRCWNDHYSSFCAYVSCPPPSI*RFPSSL
Trigger: AAGAGATGATGGAAAACGCCAAATGGAGGGAGGAGG...ACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CCA 90 bp GAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAACACCGTGTTCGCCAGGATaGTCTCGATCTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: ERSGFKHYSAWHHKCSKTPCSPG*SRSPDL
Trigger: GAGGTCAGGAGATCGAGACCATCCTGGCGAACACGG...TGTTTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR TCA 90 bp GGATCTTGGCTCAGAGCTTCTCGAGTCTCCTTTACAGAGTCTTTATATTATGCTAAGGGAATTGGCACCTaGTGGGGCAAAGATAGAGCC +
Preference number: 4 (lower is better)
Translates to: GSWLRASRVSFTESLYYAKGIGT*WGKDRA
Trigger: GGCTCTATCTTTGCCCCATCAGGTGCCAATTCCCTT...AGCATAATATAAAGACTCTGTAAAGGAGACTCGAGAAGCTCTGAGCCAAGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR TCA 90 bp AGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAATGCCATCTTCTTCTGTaGTCTCCCTGCACTGTGCTC +
Preference number: 4 (lower is better)
Translates to: RERSGFKHYSAWHHKCSKCHLLL*SPCTVL
Trigger: GAGCACAGTGCAGGGAGATCACAGAAGAAGATGGCA...TTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR GCA 90 bp CTCCTCCTAAACCAGCCAGATTCAGAGAGAAAAACGAGCTGGCCTGCCTTATTGGCCTACATTGGAGACTaGAAGCAGTGGAAAAGAATA +
Preference number: 4 (lower is better)
Translates to: LLLNQPDSERKTSWPALLAYIGD*KQWKRI
Trigger: TATTCTTTTCCACTGCTTGCAGTCTCCAATGTAGGC...CAATAAGGCAGGCCAGCTCGTTTTTCTCTCTGAATCTGGCTGGTTTAGGAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR GCA 90 bp ATGTTACATTCTCTAGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCGTTACTTGCAGATTTTaGAAAGGTCCGGGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: MLHSLGKDRVSSITVPGIVTCRF*KGPGSA
Trigger: AGCGGAGCCCGGACCTTTGCAAAATCTGCAAGTAAC...GATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCTAGAGAATGTAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614868.2
CDS-3UTR CCA 90 bp GCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGCTTCTTGGCAAAGATAGAGCCTaGGAGAAGTCCTGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: AAGTITTRASVLMFLVLLGKDRA*EKSCFR
Trigger: TCTGAAACAGGACTTCTCCCAGGCTCTATCTTTGCC...AAGAAGCACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR CCA 90 bp TATGTTACATTCTCTAGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCCTGATGATGAAGAGTaGGTCCTCCCGGATCTTGCT +
Preference number: 4 (lower is better)
Translates to: YVTFSRERSGFKHYSAWHPDDEE*VLPDLA
Trigger: AGCAAGATCCGGGAGGACCCACTCTTCATCATCAGG...ATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCTAGAGAATGTAACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CCA 90 bp GAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAACAAGTTGTGCAGTTTGCTaGGTCTTGGGGACCGTGACC +
Preference number: 4 (lower is better)
Translates to: ERSGFKHYSAWHHKCSKTSCAVC*VLGTVT
Trigger: GGTCACGGTCCCCAAGACCCAGCAAACTGCACAACT...TGTTTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CCA 90 bp CTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGCTTCTTTTTCGATGGGCTCCTAGTTTaGCCTGTCTCTCTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: LERSLLELLCLCFLCFFFDGLLV*PVSLLF
Trigger: GAACAGGAGAGAGACAGGCCAAACTAGGAGCCCATC...GAAAAAGAAGCACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR TCA 90 bp GATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAACAGAAAAAGGGAATTGGCACCTaGTGGGGCAAAGATAGAGCC +
Preference number: 4 (lower is better)
Translates to: DRVSSITVPGIISVQKQKKGIGT*WGKDRA
Trigger: GGCTCTATCTTTGCCCCATCAGGTGCCAATTCCCTT...TTTCTGTTTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR TCA 90 bp GATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAACAGAAATGCCATCTTCTTCTGTaGTCTCCCTGCACTGTGCTC +
Preference number: 4 (lower is better)
Translates to: DRVSSITVPGIISVQKQKCHLLL*SPCTVL
Trigger: GAGCACAGTGCAGGGAGATCACAGAAGAAGATGGCA...TTTCTGTTTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CCA 90 bp ATGTTACATTCTCTAGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCCTTCTGGATCTGGAATaGTTCTTCATCCCATGCCCT +
Preference number: 4 (lower is better)
Translates to: MLHSLGKDRVSSITVPGILLDLE*FFIPCP
Trigger: AGGGCATGGGATGAAGAACCATTCCAGATCCAGAAG...GATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCTAGAGAATGTAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CCA 90 bp GAGTCAAAACCCAAAGTTACTGAGTGTCCCACAAAGCAAGTCACACTAGCTCTCAGGAGCTTCTGGATCTaGAATGGTTCTTCATCCCAT +
Preference number: 4 (lower is better)
Translates to: ESKPKVTECPTKQVTLALRSFWI*NGSSSH
Trigger: ATGGGATGAAGAACCATTCCAGATCCAGAAGCTCCT...GAGAGCTAGTGTGACTTGCTTTGTGGGACACTCAGTAACTTTGGGTTTTGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CCA 90 bp ATGTTACATTCTCTAGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCGGCAAAGATAGAGCCTaGGAGAAGTCCTGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: MLHSLGKDRVSSITVPGIGKDRA*EKSCFR
Trigger: TCTGAAACAGGACTTCTCCCAGGCTCTATCTTTGCC...GATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCTAGAGAATGTAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CCA 90 bp GAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAACAGATGGGCTCCTAGTTTaGCCTGTCTCTCTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: ERSGFKHYSAWHHKCSKTDGLLV*PVSLLF
Trigger: GAACAGGAGAGAGACAGGCCAAACTAGGAGCCCATC...TGTTTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CCA 90 bp CTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGCTTCTTTTTCCTGCAGAGAGTTTTCTaGTGTATCCGGGAGCATGTC +
Preference number: 4 (lower is better)
Translates to: LERSLLELLCLCFLCFFFLQRVF*CIREHV
Trigger: GACATGCTCCCGGATACACCAGAAAACTCTCTGCAG...GAAAAAGAAGCACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR CCA 90 bp AGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAGTAAAGACAGGAGAGTaGCCCCTCGAGGGTTTTGTT +
Preference number: 4 (lower is better)
Translates to: RERSGFKHYSAWHHKCSKVKTGE*PLEGFV
Trigger: AACAAAACCCTCGAGGGGCCACTCTCCTGTCTTTAC...TTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CCA 90 bp TATGTTACATTCTCTAGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATGTAAAGACAGGAGAGTaGCCCCTCGAGGGTTTTGTT +
Preference number: 4 (lower is better)
Translates to: YVTFSRERSGFKHYSAWHVKTGE*PLEGFV
Trigger: AACAAAACCCTCGAGGGGCCACTCTCCTGTCTTTAC...ATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCTAGAGAATGTAACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CCA 90 bp GATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAACAGAAAGGCCTAGGAGTTCACTaGTCAAATGAGGGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: DRVSSITVPGIISVQKQKGLGVH*SNEGFW
Trigger: CCAGAAGCCCTCATTTGACCAGTGAACTCCTAGGCC...TTTCTGTTTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR TCA 90 bp GCCATGGAGCATATTGGCAATTTGGTTCTGACTCCTAAAATCATTTTACTATACTCTCGCAGCTCCCGCTaGAGCTCCTCAATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: AMEHIGNLVLTPKIILLYSRSSR*SSSIFF
Trigger: GAAGAAGATTGAGGAGCTTCAGCGGGAGCTGCGAGA...GTATAGTAAAATGATTTTAGGAGTCAGAACCAAATTGCCAATATGCTCCATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR TCA 90 bp TATGTTACATTCTCTAGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATTCACTCCCTTGGCTTTaGCCTAACCTGACATCATTC +
Preference number: 4 (lower is better)
Translates to: YVTFSRERSGFKHYSAWHSLPWL*PNLTSF
Trigger: GAATGATGTCAGGTTAGGTCAAAGCCAAGGGAGTGA...ATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCTAGAGAATGTAACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR GCA 90 bp GCCATGGAGCATATTGGCAATTTGGTTCTGACTCCTAAAATCATTTTACTATACACCCTGCTTCCCTGGTaGTCTTCTTGCTGGCATGTC +
Preference number: 4 (lower is better)
Translates to: AMEHIGNLVLTPKIILLYTLLPW*SSCWHV
Trigger: GACATGCCAGCAAGAAGAGCACCAGGGAAGCAGGGT...GTATAGTAAAATGATTTTAGGAGTCAGAACCAAATTGCCAATATGCTCCATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR GCA 90 bp CTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGCTTTTTTCCATCATCTCTTaGCGTTTTCGCTCTAATTCC +
Preference number: 4 (lower is better)
Translates to: LAAGTITTRASVLMFLVLFSIIS*RFRSNS
Trigger: GGAATTAGAGCGAAAACGGCAAGAGATGATGGAAAA...AAGCACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR GCA 90 bp AGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAGACGTTGGCGTTACTTaGAGATTTTGCAAAGGTCCG +
Preference number: 4 (lower is better)
Translates to: RERSGFKHYSAWHHKCSKDVGVT*RFCKGP
Trigger: CGGACCTTTGCAAAATCTGCAAGTAACGCCAACGTC...TTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614868.2
CDS-3UTR CCA 90 bp ATGTTACATTCTCTAGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCAGGAGCTTCTGGATCTaGAATGGTTCTTCATCCCAT +
Preference number: 4 (lower is better)
Translates to: MLHSLGKDRVSSITVPGIRSFWI*NGSSSH
Trigger: ATGGGATGAAGAACCATTCCAGATCCAGAAGCTCCT...GATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCTAGAGAATGTAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CCA 90 bp GAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAACAATCCCACCAGGACCCTaGTACATCCAGTCCAACTTT +
Preference number: 4 (lower is better)
Translates to: ERSGFKHYSAWHHKCSKTIPPGP*YIQSNF
Trigger: AAAGTTGGACTGGATGTACCAGGGTCCTGGTGGGAT...TGTTTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CCA 90 bp AGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAAAACATATTTGTCAATaGGGCGCCCCAGCAGGTACT +
Preference number: 4 (lower is better)
Translates to: RERSGFKHYSAWHHKCSKKHICQ*GAPAGT
Trigger: AGTACCTGCTGGGGCGCCCCATTGACAAATATGTTT...TTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CCA 90 bp CTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGCTTCTTTTTCAAACATATTTGTCAATaGGGCGCCCCAGCAGGTACT +
Preference number: 4 (lower is better)
Translates to: LERSLLELLCLCFLCFFFKHICQ*GAPAGT
Trigger: AGTACCTGCTGGGGCGCCCCATTGACAAATATGTTT...GAAAAAGAAGCACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR CCA 90 bp GATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAACAGAAACTGCAGAGAGTTTTCTaGTGTATCCGGGAGCATGTC +
Preference number: 4 (lower is better)
Translates to: DRVSSITVPGIISVQKQKLQRVF*CIREHV
Trigger: GACATGCTCCCGGATACACCAGAAAACTCTCTGCAG...TTTCTGTTTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CCA 90 bp GCCATGGAGCATATTGGCAATTTGGTTCTGACTCCTAAAATCATTTTACTATACTCCAGCTTCATGCGGTaGATGAACTTCCCATCCCGG +
Preference number: 4 (lower is better)
Translates to: AMEHIGNLVLTPKIILLYSSFMR*MNFPSR
Trigger: CCGGGATGGGAAGTTCATCCACCGCATGAAGCTGGA...GTATAGTAAAATGATTTTAGGAGTCAGAACCAAATTGCCAATATGCTCCATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CCA 90 bp ATGTTACATTCTCTAGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCAGCCATGGAGCATATTaGCAATTTGGTTCTGACTCC +
Preference number: 4 (lower is better)
Translates to: MLHSLGKDRVSSITVPGISHGAY*QFGSDS
Trigger: GGAGTCAGAACCAAATTGCCAATATGCTCCATGGCT...GATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCTAGAGAATGTAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR TCA 90 bp GCCATGGAGCATATTGGCAATTTGGTTCTGACTCCTAAAATCATTTTACTATACAAGGGAATTGGCACCTaGTGGGGCAAAGATAGAGCC +
Preference number: 4 (lower is better)
Translates to: AMEHIGNLVLTPKIILLYKGIGT*WGKDRA
Trigger: GGCTCTATCTTTGCCCCATCAGGTGCCAATTCCCTT...GTATAGTAAAATGATTTTAGGAGTCAGAACCAAATTGCCAATATGCTCCATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR TCA 90 bp CTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGCTTCTTTTGCCATCTTCTTCTGTaGTATTTAGCATCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: LLERSLLELLCLCFLCFFCHLLL*YLASPR
Trigger: CCTTGGAGATGCTAAATATCACAGAAGAAGATGGCA...AAAGAAGCACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618122.4
ENST00000631509.1
CDS-3UTR GCA 90 bp GATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAACAGAAATTCACCTTAGAGTTGTaGAGTTTGCTGGGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: DRVSSITVPGIISVQKQKFTLEL*SLLGLG
Trigger: CCCAAGACCCAGCAAACTGCACAACTCTAAGGTGAA...TTTCTGTTTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR GCA 90 bp GCCATGGAGCATATTGGCAATTTGGTTCTGACTCCTAAAATCATTTTACTATACTCAGCCTCATGCTTCTaGTCGGCCTTCCACACTTTC +
Preference number: 4 (lower is better)
Translates to: AMEHIGNLVLTPKIILLYSASCF*SAFHTF
Trigger: GAAAGTGTGGAAGGCCGAGCAGAAGCATGAGGCTGA...GTATAGTAAAATGATTTTAGGAGTCAGAACCAAATTGCCAATATGCTCCATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR GCA 90 bp GCCATGGAGCATATTGGCAATTTGGTTCTGACTCCTAAAATCATTTTACTATACCAGGGAGGAAGTAGATaGACTCTCCAGCTTCATGCG +
Preference number: 4 (lower is better)
Translates to: AMEHIGNLVLTPKIILLYQGGSR*TLQLHA
Trigger: CGCATGAAGCTGGAGAGTGCATCTACTTCCTCCCTG...GTATAGTAAAATGATTTTAGGAGTCAGAACCAAATTGCCAATATGCTCCATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR GCA 90 bp GCCATGGAGCATATTGGCAATTTGGTTCTGACTCCTAAAATCATTTTACTATACCGCTGTCGAGGCCTTTaGTGTCGAGGTCTCATTTTG +
Preference number: 4 (lower is better)
Translates to: AMEHIGNLVLTPKIILLYRCRGL*CRGLIL
Trigger: CAAAATGAGACCTCGACAGCAAAGGCCTCGACAGCG...GTATAGTAAAATGATTTTAGGAGTCAGAACCAAATTGCCAATATGCTCCATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614868.2
CDS-3UTR CCA 90 bp TATGTTACATTCTCTAGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATATCCAGGGACTTTaGACAAAACAGGGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: YVTFSRERSGFKHYSAWHHIQGL*TKQGRN
Trigger: ATTCCTCCCCTGTTTTGTCCAAAGTCCCTGGATATG...ATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCTAGAGAATGTAACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CCA 90 bp GATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAACAGAAATGTCAAGAAGGGAATTaGCACCTGATGGGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: DRVSSITVPGIISVQKQKCQEGN*HLMGQR
Trigger: TCTTTGCCCCATCAGGTGCCAATTCCCTTCTTGACA...TTTCTGTTTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CCA 90 bp GAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAACACCTCCTCCCTCCATTTaGCGTTTTCCATCATCTCTT +
Preference number: 4 (lower is better)
Translates to: ERSGFKHYSAWHHKCSKTPPPSI*RFPSSL
Trigger: AAGAGATGATGGAAAACGCCAAATGGAGGGAGGAGG...TGTTTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CCA 90 bp GAGTCAAAACCCAAAGTTACTGAGTGTCCCACAAAGCAAGTCACACTAGCTCTCCACTTTGAACACTGGTaGTTTGACATCTGTGAAAGA +
Preference number: 4 (lower is better)
Translates to: ESKPKVTECPTKQVTLALHFEHW*FDICER
Trigger: TCTTTCACAGATGTCAAACCACCAGTGTTCAAAGTG...GAGAGCTAGTGTGACTTGCTTTGTGGGACACTCAGTAACTTTGGGTTTTGACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CCA 90 bp TATGTTACATTCTCTAGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATTTACACTGCCTACATTaGAGACTGCAAGCAGTGGAA +
Preference number: 4 (lower is better)
Translates to: YVTFSRERSGFKHYSAWHLHCLH*RLQAVE
Trigger: TTCCACTGCTTGCAGTCTCCAATGTAGGCAGTGTAA...ATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCTAGAGAATGTAACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR CAA 72 bp GAGAGAAAAACGAGCTGGCCTGCCTTATTGTATTACTaGCCATCAAGGTTCAATGTGGTTCTATTACCCAGT +
Preference number: 4 (lower is better)
Translates to: ERKTSWPALLYY*PSRFNVVLLPS
Trigger: ACTGGGTAATAGAACCACATTGAACCTTGATGGCAAGTAATACAATAAGGCAGGCCAGCTCGTTTTTCTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR CAA 72 bp CCAGATTCAGAGAGAAAAACGAGCTGGCCTGCCTTATaGTATTACTTGCCATCAAGGTTCAATGTGGTTCTA +
Preference number: 4 (lower is better)
Translates to: PDSERKTSWPAL*YYLPSRFNVVL
Trigger: TAGAACCACATTGAACCTTGATGGCAAGTAATACAATAAGGCAGGCCAGCTCGTTTTTCTCTCTGAATCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
3UTR CAA 72 bp CATATCCAGGGACTTTGGACAAAACAGGGGAGGAATTaGCCATCTTCTTCTGTGATATTTAGCATCTCCAAG +
Preference number: 4 (lower is better)
Translates to: HIQGLWTKQGRN*PSSSVIFSISK
Trigger: CTTGGAGATGCTAAATATCACAGAAGAAGATGGCAAATTCCTCCCCTGTTTTGTCCAAAGTCCCTGGATATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619462.4
ENST00000631509.1
ENST00000633854.1
CDS-3UTR TCA 90 bp GAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAACATGTTTCAGGACTCAATaGAGCAGGGTCACTTTGAAC +
Preference number: 4 (lower is better)
Translates to: ERSGFKHYSAWHHKCSKTCFRTQ*SRVTLN
Trigger: GTTCAAAGTGACCCTGCTTCATTGAGTCCTGAAACA...TGTTTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR TCA 90 bp GAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAACAAGCTCTCAAAGGAAGTaGGCTGTTTCAGGACTCAAT +
Preference number: 4 (lower is better)
Translates to: ERSGFKHYSAWHHKCSKTSSQRK*AVSGLN
Trigger: ATTGAGTCCTGAAACAGCTCACTTCCTTTGAGAGCT...TGTTTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR GCA 90 bp ATGTTACATTCTCTAGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCTTTTCCATCATCTCTTaGCGTTTTCGCTCTAATTCC +
Preference number: 4 (lower is better)
Translates to: MLHSLGKDRVSSITVPGIFSIIS*RFRSNS
Trigger: GGAATTAGAGCGAAAACGGCAAGAGATGATGGAAAA...GATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCTAGAGAATGTAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CCA 90 bp GATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAACAGAAACATATCCAGGGACTTTaGACAAAACAGGGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: DRVSSITVPGIISVQKQKHIQGL*TKQGRN
Trigger: ATTCCTCCCCTGTTTTGTCCAAAGTCCCTGGATATG...TTTCTGTTTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CCA 90 bp AGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAGAGAGAAAAACGAGCTaGCCTGCCTTATTGTATTAC +
Preference number: 4 (lower is better)
Translates to: RERSGFKHYSAWHHKCSKERKTS*PALLYY
Trigger: GTAATACAATAAGGCAGGCCAGCTCGTTTTTCTCTC...TTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CCA 90 bp AGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAGGAGACTGCAAGCAGTaGAAAAGAATAGATACTCCA +
Preference number: 4 (lower is better)
Translates to: RERSGFKHYSAWHHKCSKGDCKQ*KRIDTP
Trigger: TGGAGTATCTATTCTTTTCCACTGCTTGCAGTCTCC...TTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR TCA 90 bp GATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAACAGAAAGGCTTTGACCTAACCTaGCATCATTCTGTCACATTA +
Preference number: 4 (lower is better)
Translates to: DRVSSITVPGIISVQKQKGFDLT*HHSVTL
Trigger: TAATGTGACAGAATGATGTCAGGTTAGGTCAAAGCC...TTTCTGTTTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR TCA 90 bp TATGTTACATTCTCTAGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCTACACGGTAAGAAGTaGAGCCGCAAAATAAAAACT +
Preference number: 4 (lower is better)
Translates to: YVTFSRERSGFKHYSAWHLHGKK*SRKIKT
Trigger: AGTTTTTATTTTGCGGCTTCACTTCTTACCGTGTAG...ATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCTAGAGAATGTAACATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR GCA 90 bp GCCATGGAGCATATTGGCAATTTGGTTCTGACTCCTAAAATCATTTTACTATACTGGTTCTTCATCCCATaGCCTCTCTTTTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: AMEHIGNLVLTPKIILLYWFFIP*PLFCSA
Trigger: AGCAGAGCAAAAGAGAGGGCATGGGATGAAGAACCA...GTATAGTAAAATGATTTTAGGAGTCAGAACCAAATTGCCAATATGCTCCATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR GCA 90 bp GCCATGGAGCATATTGGCAATTTGGTTCTGACTCCTAAAATCATTTTACTATACTTCACCTTAGAGTTGTaGAGTTTGCTGGGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: AMEHIGNLVLTPKIILLYFTLEL*SLLGLG
Trigger: CCCAAGACCCAGCAAACTGCACAACTCTAAGGTGAA...GTATAGTAAAATGATTTTAGGAGTCAGAACCAAATTGCCAATATGCTCCATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR GCA 90 bp TATGTTACATTCTCTAGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATTTTTCCATCATCTCTTaGCGTTTTCGCTCTAATTCC +
Preference number: 4 (lower is better)
Translates to: YVTFSRERSGFKHYSAWHFSIIS*RFRSNS
Trigger: GGAATTAGAGCGAAAACGGCAAGAGATGATGGAAAA...ATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCTAGAGAATGTAACATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CCA 90 bp GCCATGGAGCATATTGGCAATTTGGTTCTGACTCCTAAAATCATTTTACTATACTGTCAAGAAGGGAATTaGCACCTGATGGGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: AMEHIGNLVLTPKIILLYCQEGN*HLMGQR
Trigger: TCTTTGCCCCATCAGGTGCCAATTCCCTTCTTGACA...GTATAGTAAAATGATTTTAGGAGTCAGAACCAAATTGCCAATATGCTCCATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CCA 90 bp AGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAACATCAAGGTTCAATGTaGTTCTATTACCCAGTAAAG +
Preference number: 4 (lower is better)
Translates to: RERSGFKHYSAWHHKCSKHQGSM*FYYPVK
Trigger: CTTTACTGGGTAATAGAACCACATTGAACCTTGATG...TTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CCA 90 bp GCCATGGAGCATATTGGCAATTTGGTTCTGACTCCTAAAATCATTTTACTATACAGCCATGGAGCATATTaGCAATTTGGTTCTGACTCC +
Preference number: 4 (lower is better)
Translates to: AMEHIGNLVLTPKIILLYSHGAY*QFGSDS
Trigger: GGAGTCAGAACCAAATTGCCAATATGCTCCATGGCT...GTATAGTAAAATGATTTTAGGAGTCAGAACCAAATTGCCAATATGCTCCATGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR TCA 90 bp GAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAACATTTTTAGTACCTGACTaGAAGAGACTAGCAAACAAC +
Preference number: 4 (lower is better)
Translates to: ERSGFKHYSAWHHKCSKTFLVPD*KRLANN
Trigger: GTTGTTTGCTAGTCTCTTTCAGTCAGGTACTAAAAA...TGTTTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR GCA 90 bp GCCATGGAGCATATTGGCAATTTGGTTCTGACTCCTAAAATCATTTTACTATACAAAAACGAGCTGGCCTaGCTTATTGTATTACTTGCC +
Preference number: 4 (lower is better)
Translates to: AMEHIGNLVLTPKIILLYKNELA*LIVLLA
Trigger: GGCAAGTAATACAATAAGGCAGGCCAGCTCGTTTTT...GTATAGTAAAATGATTTTAGGAGTCAGAACCAAATTGCCAATATGCTCCATGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR GCA 90 bp GCCATGGAGCATATTGGCAATTTGGTTCTGACTCCTAAAATCATTTTACTATACGCCTACATTGGAGACTaGAAGCAGTGGAAAAGAATA +
Preference number: 4 (lower is better)
Translates to: AMEHIGNLVLTPKIILLYAYIGD*KQWKRI
Trigger: TATTCTTTTCCACTGCTTGCAGTCTCCAATGTAGGC...GTATAGTAAAATGATTTTAGGAGTCAGAACCAAATTGCCAATATGCTCCATGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CCA 90 bp GAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAACACATCAAGGTTCAATGTaGTTCTATTACCCAGTAAAG +
Preference number: 4 (lower is better)
Translates to: ERSGFKHYSAWHHKCSKTHQGSM*FYYPVK
Trigger: CTTTACTGGGTAATAGAACCACATTGAACCTTGATG...TGTTTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CCA 90 bp GCCATGGAGCATATTGGCAATTTGGTTCTGACTCCTAAAATCATTTTACTATACGGAGACTGCAAGCAGTaGAAAAGAATAGATACTCCA +
Preference number: 4 (lower is better)
Translates to: AMEHIGNLVLTPKIILLYGDCKQ*KRIDTP
Trigger: TGGAGTATCTATTCTTTTCCACTGCTTGCAGTCTCC...GTATAGTAAAATGATTTTAGGAGTCAGAACCAAATTGCCAATATGCTCCATGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CCA 90 bp GAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAACAAAGCATTACAGTGCCTaGCATCATAAGTGTTCAAAA +
Preference number: 4 (lower is better)
Translates to: ERSGFKHYSAWHHKCSKTKHYSA*HHKCSK
Trigger: TTTTGAACACTTATGATGCCAGGCACTGTAATGCTT...TGTTTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR GCA 90 bp GCCATGGAGCATATTGGCAATTTGGTTCTGACTCCTAAAATCATTTTACTATACACTATACCTTTACACTaGCTACATTGGAGACTGCAA +
Preference number: 4 (lower is better)
Translates to: AMEHIGNLVLTPKIILLYTIPLH*LHWRLQ
Trigger: TTGCAGTCTCCAATGTAGGCAGTGTAAAGGTATAGT...GTATAGTAAAATGATTTTAGGAGTCAGAACCAAATTGCCAATATGCTCCATGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CCA 90 bp GCCATGGAGCATATTGGCAATTTGGTTCTGACTCCTAAAATCATTTTACTATACCACTTTGAACACTGGTaGTTTGACATCTGTGAAAGA +
Preference number: 4 (lower is better)
Translates to: AMEHIGNLVLTPKIILLYHFEHW*FDICER
Trigger: TCTTTCACAGATGTCAAACCACCAGTGTTCAAAGTG...GTATAGTAAAATGATTTTAGGAGTCAGAACCAAATTGCCAATATGCTCCATGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR TCA 90 bp GCCATGGAGCATATTGGCAATTTGGTTCTGACTCCTAAAATCATTTTACTATACTTTTTAGTACCTGACTaGAAGAGACTAGCAAACAAC +
Preference number: 4 (lower is better)
Translates to: AMEHIGNLVLTPKIILLYFLVPD*KRLANN
Trigger: GTTGTTTGCTAGTCTCTTTCAGTCAGGTACTAAAAA...GTATAGTAAAATGATTTTAGGAGTCAGAACCAAATTGCCAATATGCTCCATGGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS GCA 90 bp AGTTCGGGGGCTACCTCGCGGGATCTAGTCCCAGGAGCCGTCAACTaGCAGTTTCACCACCGCTCTAGAGGTCACTTCCGGGAGGGCGTC +
Preference number: 5 (lower is better)
Translates to: SSGATSRDLVPGAVN*QFHHRSRGHFREGV
Trigger: GACGCCCTCCCGGAAGTGACCTCTAGAGCGGTGGTGAAACTGGCAGTTGACGGCTCCTGGGACTAGATCCCGCGAGGTAGCCCCCGAACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614868.2
CDS-3UTR CAA 90 bp TCAATGGGGCGCCCCAGCAGGTACTCGTCACGGTTCACCATCCCACCAGGACCCGGGTCCTCCCGGATCTaGCTGGCCATGTCAAGAAGG +
Preference number: 5 (lower is better)
Translates to: SMGRPSRYSSRFTIPPGPGSSRI*LAMSRR
Trigger: CCTTCTTGACATGGCCAGCAAGATCCGGGAGGACCC...GGGTCCTGGTGGGATGGTGAACCGTGACGAGTACCTGCTGGGGCGCCCCATTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR CAA 90 bp GACCCTGCTTCCCTGGTGCTCTTCTTGCTGGCATGTCTTGGGGGTGAGTGGGAGGGGTCCTCCCGGATCTaGCTGGCCATGTCAAGAAGG +
Preference number: 5 (lower is better)
Translates to: DPASLVLFLLACLGGEWEGSSRI*LAMSRR
Trigger: CCTTCTTGACATGGCCAGCAAGATCCGGGAGGACCC...CTCCCACTCACCCCCAAGACATGCCAGCAAGAAGAGCACCAGGGAAGCAGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR CAA 90 bp ACCGTGACCTTCTGCCCAGGGATCGAGACCTCCTGTCCCGGGACCCTGCTTCCCTTAGAGTTGTGCAGTTaGCTGGGTCTTGGGGACCGT +
Preference number: 5 (lower is better)
Translates to: TVTFCPGIETSCPGTLLPLELCS*LGLGDR
Trigger: ACGGTCCCCAAGACCCAGCAAACTGCACAACTCTAA...GGGAAGCAGGGTCCCGGGACAGGAGGTCTCGATCCCTGGGCAGAAGGTCACGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR CAA 90 bp TGTGCAGTTTGCTGGGTCTTGGGGACCGTGACCTTCTGCCCAGGGATCGAGACCCCCATGCCCTCTCTTTaGCTCTGCTGTCAGAGGACC +
Preference number: 5 (lower is better)
Translates to: CAVCWVLGTVTFCPGIETPMPSL*LCCQRT
Trigger: GGTCCTCTGACAGCAGAGCAAAAGAGAGGGCATGGG...GGTCTCGATCCCTGGGCAGAAGGTCACGGTCCCCAAGACCCAGCAAACTGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR CAA 90 bp AGTTGTGCAGTTTGCTGGGTCTTGGGGACCGTGACCTTCTGCCCAGGGATCGAGTCTTGCTGGCATGTCTaGGGGGTGAGTGGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: SCAVCWVLGTVTFCPGIESCWHV*GVSGRS
Trigger: GCTCCTCCCACTCACCCCCAAGACATGCCAGCAAGA...CTCGATCCCTGGGCAGAAGGTCACGGTCCCCAAGACCCAGCAAACTGCACAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR CAA 90 bp CCAGCAGGTACTCGTCACGGTTCACCATCCCACCAGGACCCTGGTACATCCAGTGGGTCCTCCCGGATCTaGCTGGCCATGTCAAGAAGG +
Preference number: 5 (lower is better)
Translates to: PAGTRHGSPSHQDPGTSSGSSRI*LAMSRR
Trigger: CCTTCTTGACATGGCCAGCAAGATCCGGGAGGACCC...ACTGGATGTACCAGGGTCCTGGTGGGATGGTGAACCGTGACGAGTACCTGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR CAA 90 bp CCAGCAGGTACTCGTCACGGTTCACCATCCCACCAGGACCCTGGTACATCCAGTGCAGTTTGCTGGGTCTaGGGGACCGTGACCTTCTGC +
Preference number: 5 (lower is better)
Translates to: PAGTRHGSPSHQDPGTSSAVCWV*GTVTFC
Trigger: GCAGAAGGTCACGGTCCCCAAGACCCAGCAAACTGC...ACTGGATGTACCAGGGTCCTGGTGGGATGGTGAACCGTGACGAGTACCTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS GCA 90 bp CTCTTCTTCAGATTCTCGCGGGATCTAGTCCCAGGAGCCGTCAACTaGCAGTTTCACCACCGCTCTAGAGGTCACTTCCGGGAGGGCGTC +
Preference number: 5 (lower is better)
Translates to: LFFRFSRDLVPGAVN*QFHHRSRGHFREGV
Trigger: GACGCCCTCCCGGAAGTGACCTCTAGAGCGGTGGTGAAACTGGCAGTTGACGGCTCCTGGGACTAGATCCCGCGAGAATCTGAAGAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619818.4
ENST00000633741.1
CDS-3UTR CAA 90 bp GGGTCCTCCCGGATCTTGCTGGCCATGTCAAGAAGGGAATTGGCACCTGATGGGTCCCTGGTGCTCTTCTaGCTGGCATGTCTTGGGGGT +
Preference number: 5 (lower is better)
Translates to: GSSRILLAMSRRELAPDGSLVLF*LACLGG
Trigger: ACCCCCAAGACATGCCAGCAAGAAGAGCACCAGGGA...CCCATCAGGTGCCAATTCCCTTCTTGACATGGCCAGCAAGATCCGGGAGGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR CAA 90 bp GAATGCCCAGTACCTGGCAGCTTCCAGCACAGGGCAGGTGTTCATGTCTGTGGAGGGTCCTCCCGGATCTaGCTGGCCATGTCAAGAAGG +
Preference number: 5 (lower is better)
Translates to: ECPVPGSFQHRAGVHVCGGSSRI*LAMSRR
Trigger: CCTTCTTGACATGGCCAGCAAGATCCGGGAGGACCC...TCCACAGACATGAACACCTGCCCTGTGCTGGAAGCTGCCAGGTACTGGGCATTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000622665.1
ENST00000631509.1
ENST00000632717.1
CDS GCA 90 bp GATGACGTACAGGGCTCGGTCGCGCTTTGTGACGTTGGCGTTACTTaGAGATTTTGCAAAGGTCCGGGCTCCGCTGTCGAGGCCTTTGCT +
Preference number: 5 (lower is better)
Translates to: DDVQGSVALCDVGVT*RFCKGPGSAVEAFA
Trigger: AGCAAAGGCCTCGACAGCGGAGCCCGGACCTTTGCAAAATCTGCAAGTAACGCCAACGTCACAAAGCGCGACCGAGCCCTGTACGTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614868.2
CDS-3UTR CAA 90 bp ATGAACTTCCCATCCCGGGAGTCCAGCTTCTCTAGCCTCTGCTCCCGTTCCTCACCCATGCCCTCTCTTTaGCTCTGCTGTCAGAGGACC +
Preference number: 5 (lower is better)
Translates to: MNFPSRESSFSSLCSRSSPMPSL*LCCQRT
Trigger: GGTCCTCTGACAGCAGAGCAAAAGAGAGGGCATGGG...TGAGGAACGGGAGCAGAGGCTAGAGAAGCTGGACTCCCGGGATGGGAAGTTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CAA 90 bp CTGCACTGTGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTCTTGCTGGCATGTCTaGGGGGTGAGTGGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: LHCAHPRCWNDHYSSFCASCWHV*GVSGRS
Trigger: GCTCCTCCCACTCACCCCCAAGACATGCCAGCAAGA...AGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGTGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR CAA 90 bp GTGGCACAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAATCCCTGGTGCTCTTCTaGCTGGCATGTCTTGGGGGT +
Preference number: 5 (lower is better)
Translates to: VAQALPPRWSSAHPLKSQSLVLF*LACLGG
Trigger: ACCCCCAAGACATGCCAGCAAGAAGAGCACCAGGGA...TTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CAA 90 bp CAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAAACCCAGGGTCCTCCCGGATCTaGCTGGCCATGTCAAGAAGG +
Preference number: 5 (lower is better)
Translates to: QALPPRWSSAHPLKSQNPGSSRI*LAMSRR
Trigger: CCTTCTTGACATGGCCAGCAAGATCCGGGAGGACCC...TGGGTTTTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CAA 90 bp ACATGCTCACCTCCCTGCACTGTGCTCATCCTCGCTGCTGGAACGATCACTACTGGGTCCTCCCGGATCTaGCTGGCCATGTCAAGAAGG +
Preference number: 5 (lower is better)
Translates to: TCSPPCTVLILAAGTITTGSSRI*LAMSRR
Trigger: CCTTCTTGACATGGCCAGCAAGATCCGGGAGGACCC...AGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGTGCAGGGAGGTGAGCATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000622665.1
ENST00000631509.1
ENST00000632717.1
CDS-3UTR CAA 90 bp CAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAAACCCAGCAGTTTGCTGGGTCTaGGGGACCGTGACCTTCTGC +
Preference number: 5 (lower is better)
Translates to: QALPPRWSSAHPLKSQNPAVCWV*GTVTFC
Trigger: GCAGAAGGTCACGGTCCCCAAGACCCAGCAAACTGC...TGGGTTTTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CAA 90 bp TTCACCTTAGAGTTGTGCAGTTTGCTGGGTCTTGGGGACCGTGACCTTCTGCCCGCAGTTTGCTGGGTCTaGGGGACCGTGACCTTCTGC +
Preference number: 5 (lower is better)
Translates to: FTLELCSLLGLGDRDLLPAVCWV*GTVTFC
Trigger: GCAGAAGGTCACGGTCCCCAAGACCCAGCAAACTGC...GGGCAGAAGGTCACGGTCCCCAAGACCCAGCAAACTGCACAACTCTAAGGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR CAA 90 bp TGGGGCGCCCCAGCAGGTACTCGTCACGGTTCACCATCCCACCAGGACCCTGGTAGTGAAATAGGTCTGTaGGCACAGGTAAGAAGGAAG +
Preference number: 5 (lower is better)
Translates to: WGAPAGTRHGSPSHQDPGSEIGL*AQVRRK
Trigger: CTTCCTTCTTACCTGTGCCAACAGACCTATTTCACT...ACCAGGGTCCTGGTGGGATGGTGAACCGTGACGAGTACCTGCTGGGGCGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS GCA 90 bp CCCACAGTCACAGGTTATTTCCCAGTGAATCCCACACTCACAGTTTaGTGGGTCTTGGGGACCGTGACCTTCTGCCCAGGGATCGAGACC +
Preference number: 5 (lower is better)
Translates to: PTVTGYFPVNPTLTV*WVLGTVTFCPGIET
Trigger: GGTCTCGATCCCTGGGCAGAAGGTCACGGTCCCCAAGACCCAGCAAACTGTGAGTGTGGGATTCACTGGGAAATAACCTGTGACTGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611845.1
ENST00000633577.1
CDS GCA 90 bp TGCTTCTGCTCGGCCTTCCACACTTTCTCCACATTCCTGAGGGTCTaGGGGTGCCAGCTCTTCTTCAGATTCTCGCGGGATCTAGTCCCA +
Preference number: 5 (lower is better)
Translates to: CFCSAFHTFSTFLRV*GCQLFFRFSRDLVP
Trigger: TGGGACTAGATCCCGCGAGAATCTGAAGAAGAGCTGGCACCCGCAGACCCTCAGGAATGTGGAGAAAGTGTGGAAGGCCGAGCAGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619818.4
ENST00000633741.1
CDS-3UTR CAA 90 bp GCACAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAAACCCCATGCCCTCTCTTTaGCTCTGCTGTCAGAGGACC +
Preference number: 5 (lower is better)
Translates to: AQALPPRWSSAHPLKSQNPMPSL*LCCQRT
Trigger: GGTCCTCTGACAGCAGAGCAAAAGAGAGGGCATGGG...GTTTTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CAA 90 bp GGTCAGAGTTCCGGACCTGTAAGCCATATCCAGGGACTTTGGACAAAACAGGGGTCTTGCTGGCATGTCTaGGGGGTGAGTGGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: GQSSGPVSHIQGLWTKQGSCWHV*GVSGRS
Trigger: GCTCCTCCCACTCACCCCCAAGACATGCCAGCAAGA...CCCCTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCCGGAACTCTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR CAA 90 bp CTGCACTGTGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTCCCTGGTGCTCTTCTaGCTGGCATGTCTTGGGGGT +
Preference number: 5 (lower is better)
Translates to: LHCAHPRCWNDHYSSFCASLVLF*LACLGG
Trigger: ACCCCCAAGACATGCCAGCAAGAAGAGCACCAGGGA...AGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR CAA 90 bp GGGTCCTCCCGGATCTTGCTGGCCATGTCAAGAAGGGAATTGGCACCTGATGGGCATTTCCAAGATGACTaGACGGCCCCAACATCCTCC +
Preference number: 5 (lower is better)
Translates to: GSSRILLAMSRRELAPDGHFQDD*TAPTSS
Trigger: GGAGGATGTTGGGGCCGTCAAGTCATCTTGGAAATG...CCCATCAGGTGCCAATTCCCTTCTTGACATGGCCAGCAAGATCCGGGAGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000619299.4
ENST00000622665.1
ENST00000631731.1
ENST00000632717.1
CDS CCA 90 bp ACAGTCACAGGTTATTTCCCAGTGAATCCCACACTCACAGTTTGCTaGGTCTTGGGGACCGTGACCTTCTGCCCAGGGATCGAGACCTCC +
Preference number: 5 (lower is better)
Translates to: TVTGYFPVNPTLTVC*VLGTVTFCPGIETS
Trigger: GGAGGTCTCGATCCCTGGGCAGAAGGTCACGGTCCCCAAGACCCAGCAAACTGTGAGTGTGGGATTCACTGGGAAATAACCTGTGACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611845.1
ENST00000633577.1
CDS-3UTR CAA 90 bp CGGACCTGTAAGCCATATCCAGGGACTTTGGACAAAACAGGGGAGGAATTTGCCTCTTGCTGGCATGTCTaGGGGGTGAGTGGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: RTCKPYPGTLDKTGEEFASCWHV*GVSGRS
Trigger: GCTCCTCCCACTCACCCCCAAGACATGCCAGCAAGA...GGCAAATTCCTCCCCTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR CAA 90 bp GCTCACCTCCCTGCACTGTGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGATGTCAAGAAGGGAATaGGCACCTGATGGGGCAAAG +
Preference number: 5 (lower is better)
Translates to: AHLPALCSSSLLERSLLEMSRRE*APDGAK
Trigger: CTTTGCCCCATCAGGTGCCAATTCCCTTCTTGACAT...CTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGTGCAGGGAGGTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000622665.1
ENST00000631509.1
ENST00000632717.1
CDS-3UTR CAA 90 bp CACGGTTCACCATCCCACCAGGACCCTGGTACATCCAGTCCAACTTTTCTTCTTGGGTCCTCCCGGATCTaGCTGGCCATGTCAAGAAGG +
Preference number: 5 (lower is better)
Translates to: HGSPSHQDPGTSSPTFLLGSSRI*LAMSRR
Trigger: CCTTCTTGACATGGCCAGCAAGATCCGGGAGGACCC...AAGAAGAAAAGTTGGACTGGATGTACCAGGGTCCTGGTGGGATGGTGAACCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR CAA 90 bp TTCCTCTGCAGAGAGTTTTCTGGTGTATCCGGGAGCATGTCGCCTTTGGTAGACGCAGTTTGCTGGGTCTaGGGGACCGTGACCTTCTGC +
Preference number: 5 (lower is better)
Translates to: FLCREFSGVSGSMSPLVDAVCWV*GTVTFC
Trigger: GCAGAAGGTCACGGTCCCCAAGACCCAGCAAACTGC...GTCTACCAAAGGCGACATGCTCCCGGATACACCAGAAAACTCTCTGCAGAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR CAA 90 bp CGGACCTGTAAGCCATATCCAGGGACTTTGGACAAAACAGGGGAGGAATTTGCCGCAGTTTGCTGGGTCTaGGGGACCGTGACCTTCTGC +
Preference number: 5 (lower is better)
Translates to: RTCKPYPGTLDKTGEEFAAVCWV*GTVTFC
Trigger: GCAGAAGGTCACGGTCCCCAAGACCCAGCAAACTGC...GGCAAATTCCTCCCCTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR CAA 90 bp TGGGAGGAGCTTCTGGATCTGGAATGGTTCTTCATCCCATGCCCTCTCTTTTGCGCAGTTTGCTGGGTCTaGGGGACCGTGACCTTCTGC +
Preference number: 5 (lower is better)
Translates to: WEELLDLEWFFIPCPLFCAVCWV*GTVTFC
Trigger: GCAGAAGGTCACGGTCCCCAAGACCCAGCAAACTGC...GCAAAAGAGAGGGCATGGGATGAAGAACCATTCCAGATCCAGAAGCTCCTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR CAA 90 bp GAGTGGGAGGAGCTTCTGGATCTGGAATGGTTCTTCATCCCATGCCCTCTCTTTCCCATGCCCTCTCTTTaGCTCTGCTGTCAGAGGACC +
Preference number: 5 (lower is better)
Translates to: EWEELLDLEWFFIPCPLFPMPSL*LCCQRT
Trigger: GGTCCTCTGACAGCAGAGCAAAAGAGAGGGCATGGG...AAAGAGAGGGCATGGGATGAAGAACCATTCCAGATCCAGAAGCTCCTCCCACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR CAA 90 bp TGGGAGGAGCTTCTGGATCTGGAATGGTTCTTCATCCCATGCCCTCTCTTTTGCCCCATGCCCTCTCTTTaGCTCTGCTGTCAGAGGACC +
Preference number: 5 (lower is better)
Translates to: WEELLDLEWFFIPCPLFCPMPSL*LCCQRT
Trigger: GGTCCTCTGACAGCAGAGCAAAAGAGAGGGCATGGG...GCAAAAGAGAGGGCATGGGATGAAGAACCATTCCAGATCCAGAAGCTCCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR CAA 90 bp CTGCAGAGAGTTTTCTGGTGTATCCGGGAGCATGTCGCCTTTGGTAGACCTCTTCCCATGCCCTCTCTTTaGCTCTGCTGTCAGAGGACC +
Preference number: 5 (lower is better)
Translates to: LQRVFWCIREHVAFGRPLPMPSL*LCCQRT
Trigger: GGTCCTCTGACAGCAGAGCAAAAGAGAGGGCATGGG...AAGAGGTCTACCAAAGGCGACATGCTCCCGGATACACCAGAAAACTCTCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR CAA 90 bp GTGGCACAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAATGTCAAGAAGGGAATaGGCACCTGATGGGGCAAAG +
Preference number: 5 (lower is better)
Translates to: VAQALPPRWSSAHPLKSQMSRRE*APDGAK
Trigger: CTTTGCCCCATCAGGTGCCAATTCCCTTCTTGACAT...TTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CAA 90 bp AGTGGGAGGAGCTTCTGGATCTGGAATGGTTCTTCATCCCATGCCCTCTCTTTTGCAGTTTGCTGGGTCTaGGGGACCGTGACCTTCTGC +
Preference number: 5 (lower is better)
Translates to: SGRSFWIWNGSSSHALSFAVCWV*GTVTFC
Trigger: GCAGAAGGTCACGGTCCCCAAGACCCAGCAAACTGC...AAAAGAGAGGGCATGGGATGAAGAACCATTCCAGATCCAGAAGCTCCTCCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR CAA 90 bp ATGAACTTCCCATCCCGGGAGTCCAGCTTCTCTAGCCTCTGCTCCCGTTCCTCATCCTCCTCCCTCCATTaGGCGTTTTCCATCATCTCT +
Preference number: 5 (lower is better)
Translates to: MNFPSRESSFSSLCSRSSSSSLH*AFSIIS
Trigger: AGAGATGATGGAAAACGCCAAATGGAGGGAGGAGGA...TGAGGAACGGGAGCAGAGGCTAGAGAAGCTGGACTCCCGGGATGGGAAGTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CAA 90 bp TTCACCTTAGAGTTGTGCAGTTTGCTGGGTCTTGGGGACCGTGACCTTCTGCCCCATTTCCAAGATGACTaGACGGCCCCAACATCCTCC +
Preference number: 5 (lower is better)
Translates to: FTLELCSLLGLGDRDLLPHFQDD*TAPTSS
Trigger: GGAGGATGTTGGGGCCGTCAAGTCATCTTGGAAATG...GGGCAGAAGGTCACGGTCCCCAAGACCCAGCAAACTGCACAACTCTAAGGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CAA 90 bp CTCCTCCTAAACCAGCCAGATTCAGAGAGAAAAACGAGCTGGCCTGCCTTATTGTCCCTGGTGCTCTTCTaGCTGGCATGTCTTGGGGGT +
Preference number: 5 (lower is better)
Translates to: LLLNQPDSERKTSWPALLSLVLF*LACLGG
Trigger: ACCCCCAAGACATGCCAGCAAGAAGAGCACCAGGGA...CAATAAGGCAGGCCAGCTCGTTTTTCTCTCTGAATCTGGCTGGTTTAGGAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CAA 90 bp CTGCACTGTGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTATGTCAAGAAGGGAATaGGCACCTGATGGGGCAAAG +
Preference number: 5 (lower is better)
Translates to: LHCAHPRCWNDHYSSFCAMSRRE*APDGAK
Trigger: CTTTGCCCCATCAGGTGCCAATTCCCTTCTTGACAT...AGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR CAA 90 bp ACATGCTCACCTCCCTGCACTGTGCTCATCCTCGCTGCTGGAACGATCACTACTATGTCAAGAAGGGAATaGGCACCTGATGGGGCAAAG +
Preference number: 5 (lower is better)
Translates to: TCSPPCTVLILAAGTITTMSRRE*APDGAK
Trigger: CTTTGCCCCATCAGGTGCCAATTCCCTTCTTGACAT...AGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGTGCAGGGAGGTGAGCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000622665.1
ENST00000631509.1
ENST00000632717.1
CDS-3UTR CAA 90 bp GGTCAGAGTTCCGGACCTGTAAGCCATATCCAGGGACTTTGGACAAAACAGGGGTTAGAGTTGTGCAGTTaGCTGGGTCTTGGGGACCGT +
Preference number: 5 (lower is better)
Translates to: GQSSGPVSHIQGLWTKQGLELCS*LGLGDR
Trigger: ACGGTCCCCAAGACCCAGCAAACTGCACAACTCTAA...CCCCTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCCGGAACTCTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR CAA 90 bp CAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAAACCCATCCTTAGCATGCCTCTaGAGGATGTTCAGTCTCTCC +
Preference number: 5 (lower is better)
Translates to: QALPPRWSSAHPLKSQNPSLACL*RMFSLS
Trigger: GGAGAGACTGAACATCCTCAAGAGGCATGCTAAGGA...TGGGTTTTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CAA 90 bp CTGGCCATGTCAAGAAGGGAATTGGCACCTGATGGGGCAAAGATAGAGCCTGGGTCCTTAGCATGCCTCTaGAGGATGTTCAGTCTCTCC +
Preference number: 5 (lower is better)
Translates to: LAMSRRELAPDGAKIEPGSLACL*RMFSLS
Trigger: GGAGAGACTGAACATCCTCAAGAGGCATGCTAAGGA...CCCAGGCTCTATCTTTGCCCCATCAGGTGCCAATTCCCTTCTTGACATGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CAA 90 bp GTGGCACAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAATTTACACTGCCTACATaGGAGACTGCAAGCAGTGGA +
Preference number: 5 (lower is better)
Translates to: VAQALPPRWSSAHPLKSQFTLPT*ETASSG
Trigger: TCCACTGCTTGCAGTCTCCAATGTAGGCAGTGTAAA...TTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CAA 90 bp CCTTCTGATGATGAAGAGTGGGTCCTCCCGGATCTTGCTGGCCATGTCAAGAAGCATTTCCAAGATGACTaGACGGCCCCAACATCCTCC +
Preference number: 5 (lower is better)
Translates to: PSDDEEWVLPDLAGHVKKHFQDD*TAPTSS
Trigger: GGAGGATGTTGGGGCCGTCAAGTCATCTTGGAAATG...CTTCTTGACATGGCCAGCAAGATCCGGGAGGACCCACTCTTCATCATCAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000622665.1
ENST00000632717.1
CDS GCA 90 bp CACAGGGCAGGTGTTCATGTCTCCCTGCACTGTGCTCATCCTCGCTaGTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGT +
Preference number: 5 (lower is better)
Translates to: HRAGVHVSLHCAHPR*WNDHYSSFCAYVSC
Trigger: ACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGTGCAGGGAGACATGAACACCTGCCCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619462.4
ENST00000633854.1
CDS-3UTR CAA 90 bp CATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTCCCATGCCCTCTCTTTaGCTCTGCTGTCAGAGGACC +
Preference number: 5 (lower is better)
Translates to: HPRCWNDHYSSFCAYVSCPMPSL*LCCQRT
Trigger: GGTCCTCTGACAGCAGAGCAAAAGAGAGGGCATGGG...ACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR CAA 90 bp GAGTCAAAACCCAAAGTTACTGAGTGTCCCACAAAGCAAGTCACACTAGCTCTCTCTTGCTGGCATGTCTaGGGGGTGAGTGGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: ESKPKVTECPTKQVTLALSCWHV*GVSGRS
Trigger: GCTCCTCCCACTCACCCCCAAGACATGCCAGCAAGA...GAGAGCTAGTGTGACTTGCTTTGTGGGACACTCAGTAACTTTGGGTTTTGACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CAA 90 bp TTCCGGACCTGTAAGCCATATCCAGGGACTTTGGACAAAACAGGGGAGGAATTTTCCCTGGTGCTCTTCTaGCTGGCATGTCTTGGGGGT +
Preference number: 5 (lower is better)
Translates to: FRTCKPYPGTLDKTGEEFSLVLF*LACLGG
Trigger: ACCCCCAAGACATGCCAGCAAGAAGAGCACCAGGGA...AAATTCCTCCCCTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCCGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR CAA 90 bp CTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGCTTTCCCTGGTGCTCTTCTaGCTGGCATGTCTTGGGGGT +
Preference number: 5 (lower is better)
Translates to: LAAGTITTRASVLMFLVLSLVLF*LACLGG
Trigger: ACCCCCAAGACATGCCAGCAAGAAGAGCACCAGGGA...AAGCACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR CAA 90 bp TGGGAGGAGCTTCTGGATCTGGAATGGTTCTTCATCCCATGCCCTCTCTTTTGCTTAGAGTTGTGCAGTTaGCTGGGTCTTGGGGACCGT +
Preference number: 5 (lower is better)
Translates to: WEELLDLEWFFIPCPLFCLELCS*LGLGDR
Trigger: ACGGTCCCCAAGACCCAGCAAACTGCACAACTCTAA...GCAAAAGAGAGGGCATGGGATGAAGAACCATTCCAGATCCAGAAGCTCCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR CAA 90 bp CCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGCTTTAGAGTTGTGCAGTTaGCTGGGTCTTGGGGACCGT +
Preference number: 5 (lower is better)
Translates to: PRCWNDHYSSFCAYVSCALELCS*LGLGDR
Trigger: ACGGTCCCCAAGACCCAGCAAACTGCACAACTCTAA...AGCACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR CAA 90 bp CACTGTGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATTCCTCCTCCCTCCATTaGGCGTTTTCCATCATCTCT +
Preference number: 5 (lower is better)
Translates to: HCAHPRCWNDHYSSFCAYSSSLH*AFSIIS
Trigger: AGAGATGATGGAAAACGCCAAATGGAGGGAGGAGGA...ATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CAA 90 bp CGGACCTGTAAGCCATATCCAGGGACTTTGGACAAAACAGGGGAGGAATTTGCCTCCTTAGCATGCCTCTaGAGGATGTTCAGTCTCTCC +
Preference number: 5 (lower is better)
Translates to: RTCKPYPGTLDKTGEEFASLACL*RMFSLS
Trigger: GGAGAGACTGAACATCCTCAAGAGGCATGCTAAGGA...GGCAAATTCCTCCCCTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CAA 90 bp ATGTTACATTCTCTAGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCCCCATGCCCTCTCTTTaGCTCTGCTGTCAGAGGACC +
Preference number: 5 (lower is better)
Translates to: MLHSLGKDRVSSITVPGIPMPSL*LCCQRT
Trigger: GGTCCTCTGACAGCAGAGCAAAAGAGAGGGCATGGG...GATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCTAGAGAATGTAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CAA 90 bp AGTGGGAGGAGCTTCTGGATCTGGAATGGTTCTTCATCCCATGCCCTCTCTTTTATGTCAAGAAGGGAATaGGCACCTGATGGGGCAAAG +
Preference number: 5 (lower is better)
Translates to: SGRSFWIWNGSSSHALSFMSRRE*APDGAK
Trigger: CTTTGCCCCATCAGGTGCCAATTCCCTTCTTGACAT...AAAAGAGAGGGCATGGGATGAAGAACCATTCCAGATCCAGAAGCTCCTCCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR CAA 90 bp ACGGTTCACCATCCCACCAGGACCCTGGTACATCCAGTCCAACTTTTCTTCTTTATGTCAAGAAGGGAATaGGCACCTGATGGGGCAAAG +
Preference number: 5 (lower is better)
Translates to: TVHHPTRTLVHPVQLFFFMSRRE*APDGAK
Trigger: CTTTGCCCCATCAGGTGCCAATTCCCTTCTTGACAT...AAAGAAGAAAAGTTGGACTGGATGTACCAGGGTCCTGGTGGGATGGTGAACCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR CAA 90 bp TATGTTACATTCTCTAGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATGGGTCCTCCCGGATCTaGCTGGCCATGTCAAGAAGG +
Preference number: 5 (lower is better)
Translates to: YVTFSRERSGFKHYSAWHGSSRI*LAMSRR
Trigger: CCTTCTTGACATGGCCAGCAAGATCCGGGAGGACCC...ATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCTAGAGAATGTAACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CAA 90 bp AGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAGCAGTTTGCTGGGTCTaGGGGACCGTGACCTTCTGC +
Preference number: 5 (lower is better)
Translates to: RERSGFKHYSAWHHKCSKAVCWV*GTVTFC
Trigger: GCAGAAGGTCACGGTCCCCAAGACCCAGCAAACTGC...TTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CAA 90 bp CTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGCTTTTAGAGTTGTGCAGTTaGCTGGGTCTTGGGGACCGT +
Preference number: 5 (lower is better)
Translates to: LAAGTITTRASVLMFLVLLELCS*LGLGDR
Trigger: ACGGTCCCCAAGACCCAGCAAACTGCACAACTCTAA...AAGCACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000631509.1
ENST00000631731.1
CDS-3UTR CAA 90 bp TTCCGGACCTGTAAGCCATATCCAGGGACTTTGGACAAAACAGGGGAGGAATTTTTAGAGTTGTGCAGTTaGCTGGGTCTTGGGGACCGT +
Preference number: 5 (lower is better)
Translates to: FRTCKPYPGTLDKTGEEFLELCS*LGLGDR
Trigger: ACGGTCCCCAAGACCCAGCAAACTGCACAACTCTAA...AAATTCCTCCCCTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCCGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000619462.4
ENST00000631509.1
ENST00000631731.1
ENST00000633854.1
CDS-3UTR CAA 90 bp GCACAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAAACTTGAACACTGGTGGTTaGACATCTGTGAAAGAAGTC +
Preference number: 5 (lower is better)
Translates to: AQALPPRWSSAHPLKSQNLNTGG*TSVKEV
Trigger: GACTTCTTTCACAGATGTCAAACCACCAGTGTTCAA...GTTTTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CAA 90 bp TTGGCACCTGATGGGGCAAAGATAGAGCCTGGGAGAAGTCCTGTTTCAGAAGAGAAACAGGGGAGGAATTaGCCATCTTCTTCTGTGATC +
Preference number: 5 (lower is better)
Translates to: LAPDGAKIEPGRSPVSEEKQGRN*PSSSVI
Trigger: GATCACAGAAGAAGATGGCAAATTCCTCCCCTGTTT...CTCTTCTGAAACAGGACTTCTCCCAGGCTCTATCTTTGCCCCATCAGGTGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CAA 90 bp GAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAACATCTTGCTGGCATGTCTaGGGGGTGAGTGGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: ERSGFKHYSAWHHKCSKTSCWHV*GVSGRS
Trigger: GCTCCTCCCACTCACCCCCAAGACATGCCAGCAAGA...TGTTTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CAA 90 bp AGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAATCCCTGGTGCTCTTCTaGCTGGCATGTCTTGGGGGT +
Preference number: 5 (lower is better)
Translates to: RERSGFKHYSAWHHKCSKSLVLF*LACLGG
Trigger: ACCCCCAAGACATGCCAGCAAGAAGAGCACCAGGGA...TTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CAA 90 bp GGTCAGAGTTCCGGACCTGTAAGCCATATCCAGGGACTTTGGACAAAACAGGGGTTGAACACTGGTGGTTaGACATCTGTGAAAGAAGTC +
Preference number: 5 (lower is better)
Translates to: GQSSGPVSHIQGLWTKQGLNTGG*TSVKEV
Trigger: GACTTCTTTCACAGATGTCAAACCACCAGTGTTCAA...CCCCTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCCGGAACTCTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CAA 90 bp GCACAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAAACGCCTTATTGTATTACTaGCCATCAAGGTTCAATGTG +
Preference number: 5 (lower is better)
Translates to: AQALPPRWSSAHPLKSQNALLYY*PSRFNV
Trigger: CACATTGAACCTTGATGGCAAGTAATACAATAAGGC...GTTTTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS TCA 90 bp TCCTTTACAGAGTCTTTATATTATGCTTTCATTTCCAAGATGACTTaGCGGCCCCAACATCCTCCGCATAGCGCTGCATCTCTTCCCGGG +
Preference number: 5 (lower is better)
Translates to: SFTESLYYAFISKMT*RPQHPPHSAASLPG
Trigger: CCCGGGAAGAGATGCAGCGCTATGCGGAGGATGTTGGGGCCGTCAAGTCATCTTGGAAATGAAAGCATAATATAAAGACTCTGTAAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000619299.4
ENST00000622665.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR CAA 90 bp TGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCAAACAGGGGAGGAATTaGCCATCTTCTTCTGTGATC +
Preference number: 5 (lower is better)
Translates to: CSSSLLERSLLELLCLCFKQGRN*PSSSVI
Trigger: GATCACAGAAGAAGATGGCAAATTCCTCCCCTGTTT...GAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CAA 90 bp GCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGCTTCTTATGTCAAGAAGGGAATaGGCACCTGATGGGGCAAAG +
Preference number: 5 (lower is better)
Translates to: AAGTITTRASVLMFLVLLMSRRE*APDGAK
Trigger: CTTTGCCCCATCAGGTGCCAATTCCCTTCTTGACAT...AAGAAGCACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000618122.4
ENST00000619299.4
ENST00000622665.1
ENST00000631509.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR CAA 90 bp GAGTCAAAACCCAAAGTTACTGAGTGTCCCACAAAGCAAGTCACACTAGCTCTCTCCTCCTCCCTCCATTaGGCGTTTTCCATCATCTCT +
Preference number: 5 (lower is better)
Translates to: ESKPKVTECPTKQVTLALSSSLH*AFSIIS
Trigger: AGAGATGATGGAAAACGCCAAATGGAGGGAGGAGGA...GAGAGCTAGTGTGACTTGCTTTGTGGGACACTCAGTAACTTTGGGTTTTGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CAA 90 bp ACTGTGCTCATCCTCGCTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTGAACACTGGTGGTTaGACATCTGTGAAAGAAGTC +
Preference number: 5 (lower is better)
Translates to: TVLILAAGTITTRASVLMLNTGG*TSVKEV
Trigger: GACTTCTTTCACAGATGTCAAACCACCAGTGTTCAA...CATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAGCGAGGATGAGCACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CAA 90 bp CTCCTCCTAAACCAGCCAGATTCAGAGAGAAAAACGAGCTGGCCTGCCTTATTGAGTGAAATAGGTCTGTaGGCACAGGTAAGAAGGAAG +
Preference number: 5 (lower is better)
Translates to: LLLNQPDSERKTSWPALLSEIGL*AQVRRK
Trigger: CTTCCTTCTTACCTGTGCCAACAGACCTATTTCACT...CAATAAGGCAGGCCAGCTCGTTTTTCTCTCTGAATCTGGCTGGTTTAGGAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CAA 90 bp GCACAAGCACTCCCACCGAGATGGTCCAGTGCCCACCCGTTAAAGAGTCAAAACTACCCAGTAAAGTCATaGACCAAACAAGGTATTTTC +
Preference number: 5 (lower is better)
Translates to: AQALPPRWSSAHPLKSQNYPVKS*TKQGIF
Trigger: GAAAATACCTTGTTTGGTCAATGACTTTACTGGGTA...GTTTTGACTCTTTAACGGGTGGGCACTGGACCATCTCGGTGGGAGTGCTTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CAA 90 bp CTGCTGGAACGATCACTACTCGAGCTTCTGTGCTTATGTTTCTTGTGCTTCTTTCATTTCCAAGATGACTaGACGGCCCCAACATCCTCC +
Preference number: 5 (lower is better)
Translates to: LLERSLLELLCLCFLCFFHFQDD*TAPTSS
Trigger: GGAGGATGTTGGGGCCGTCAAGTCATCTTGGAAATG...AAAGAAGCACAAGAAACATAAGCACAGAAGCTCGAGTAGTGATCGTTCCAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000619299.4
ENST00000622665.1
ENST00000631731.1
ENST00000632717.1
CDS-3UTR CAA 90 bp TATGTTACATTCTCTAGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCGTTACTTGCAGATTTaGCAAAGGTCCGGGCTCCGC +
Preference number: 5 (lower is better)
Translates to: YVTFSRERSGFKHYSAWHRYLQI*QRSGLR
Trigger: GCGGAGCCCGGACCTTTGCAAAATCTGCAAGTAACG...ATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCTAGAGAATGTAACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614868.2
CDS-3UTR CAA 90 bp GCCATGGAGCATATTGGCAATTTGGTTCTGACTCCTAAAATCATTTTACTATACTCTTGCTGGCATGTCTaGGGGGTGAGTGGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: AMEHIGNLVLTPKIILLYSCWHV*GVSGRS
Trigger: GCTCCTCCCACTCACCCCCAAGACATGCCAGCAAGA...GTATAGTAAAATGATTTTAGGAGTCAGAACCAAATTGCCAATATGCTCCATGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CAA 90 bp GGACCTGTAAGCCATATCCAGGGACTTTGGACAAAACAGGGGAGGAATTTGCCAAAACAGGGGAGGAATTaGCCATCTTCTTCTGTGATA +
Preference number: 5 (lower is better)
Translates to: GPVSHIQGLWTKQGRNLPKQGRN*PSSSVI
Trigger: TATCACAGAAGAAGATGGCAAATTCCTCCCCTGTTT...TGGCAAATTCCTCCCCTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619462.4
ENST00000631509.1
ENST00000633854.1
CDS-3UTR CAA 90 bp TACGGTCAGAGTTCCGGACCTGTAAGCCATATCCAGGGACTTTGGACAAAACAGAAACAGGGGAGGAATTaGCCATCTTCTTCTGTGATA +
Preference number: 5 (lower is better)
Translates to: YGQSSGPVSHIQGLWTKQKQGRN*PSSSVI
Trigger: TATCACAGAAGAAGATGGCAAATTCCTCCCCTGTTT...CTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCCGGAACTCTGACCGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619462.4
ENST00000631509.1
ENST00000633854.1
CDS-3UTR CAA 90 bp AGTGGGAGGAGCTTCTGGATCTGGAATGGTTCTTCATCCCATGCCCTCTCTTTTAAACAGGGGAGGAATTaGCCATCTTCTTCTGTGATA +
Preference number: 5 (lower is better)
Translates to: SGRSFWIWNGSSSHALSFKQGRN*PSSSVI
Trigger: TATCACAGAAGAAGATGGCAAATTCCTCCCCTGTTT...AAAAGAGAGGGCATGGGATGAAGAACCATTCCAGATCCAGAAGCTCCTCCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000618122.4
ENST00000619462.4
ENST00000631509.1
ENST00000633854.1
CDS-3UTR CAA 90 bp AGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAATTAGAGTTGTGCAGTTaGCTGGGTCTTGGGGACCGT +
Preference number: 5 (lower is better)
Translates to: RERSGFKHYSAWHHKCSKLELCS*LGLGDR
Trigger: ACGGTCCCCAAGACCCAGCAAACTGCACAACTCTAA...TTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CAA 90 bp ATGTTACATTCTCTAGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCTCCTCCTCCCTCCATTaGGCGTTTTCCATCATCTCT +
Preference number: 5 (lower is better)
Translates to: MLHSLGKDRVSSITVPGISSSLH*AFSIIS
Trigger: AGAGATGATGGAAAACGCCAAATGGAGGGAGGAGGA...GATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCTAGAGAATGTAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CAA 90 bp TTCCGGACCTGTAAGCCATATCCAGGGACTTTGGACAAAACAGGGGAGGAATTTAGTGAAATAGGTCTGTaGGCACAGGTAAGAAGGAAG +
Preference number: 5 (lower is better)
Translates to: FRTCKPYPGTLDKTGEEFSEIGL*AQVRRK
Trigger: CTTCCTTCTTACCTGTGCCAACAGACCTATTTCACT...AAATTCCTCCCCTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTCCGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619299.4
ENST00000631731.1
CDS-3UTR CAA 90 bp TATGTTACATTCTCTAGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATATGTCAAGAAGGGAATaGGCACCTGATGGGGCAAAG +
Preference number: 5 (lower is better)
Translates to: YVTFSRERSGFKHYSAWHMSRRE*APDGAK
Trigger: CTTTGCCCCATCAGGTGCCAATTCCCTTCTTGACAT...ATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCTAGAGAATGTAACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CAA 90 bp GATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAACAGAAATTAGAGTTGTGCAGTTaGCTGGGTCTTGGGGACCGT +
Preference number: 5 (lower is better)
Translates to: DRVSSITVPGIISVQKQKLELCS*LGLGDR
Trigger: ACGGTCCCCAAGACCCAGCAAACTGCACAACTCTAA...TTTCTGTTTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CAA 90 bp AGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAATCCTTAGCATGCCTCTaGAGGATGTTCAGTCTCTCC +
Preference number: 5 (lower is better)
Translates to: RERSGFKHYSAWHHKCSKSLACL*RMFSLS
Trigger: GGAGAGACTGAACATCCTCAAGAGGCATGCTAAGGA...TTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CAA 90 bp GAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAACACCATATCCAGGGACTTaGGACAAAACAGGGGAGGAA +
Preference number: 5 (lower is better)
Translates to: ERSGFKHYSAWHHKCSKTPYPGT*DKTGEE
Trigger: TTCCTCCCCTGTTTTGTCCAAAGTCCCTGGATATGG...TGTTTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CAA 90 bp GATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAACAGAAACCATATCCAGGGACTTaGGACAAAACAGGGGAGGAA +
Preference number: 5 (lower is better)
Translates to: DRVSSITVPGIISVQKQKPYPGT*DKTGEE
Trigger: TTCCTCCCCTGTTTTGTCCAAAGTCCCTGGATATGG...TTTCTGTTTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CAA 90 bp GCCATGGAGCATATTGGCAATTTGGTTCTGACTCCTAAAATCATTTTACTATACCCGCTGTCGAGGCCTTaGCTGTCGAGGTCTCATTTT +
Preference number: 5 (lower is better)
Translates to: AMEHIGNLVLTPKIILLYPLSRP*LSRSHF
Trigger: AAAATGAGACCTCGACAGCAAAGGCCTCGACAGCGG...GTATAGTAAAATGATTTTAGGAGTCAGAACCAAATTGCCAATATGCTCCATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614868.2
CDS-3UTR CAA 90 bp AGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAATCGCGCTTTGTGACGTaGGCGTTACTTGCAGATTTT +
Preference number: 5 (lower is better)
Translates to: RERSGFKHYSAWHHKCSKSRFVT*ALLADF
Trigger: AAAATCTGCAAGTAACGCCAACGTCACAAAGCGCGA...TTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614868.2
CDS-3UTR CAA 90 bp AGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAATTGAACACTGGTGGTTaGACATCTGTGAAAGAAGTC +
Preference number: 5 (lower is better)
Translates to: RERSGFKHYSAWHHKCSKLNTGG*TSVKEV
Trigger: GACTTCTTTCACAGATGTCAAACCACCAGTGTTCAA...TTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CAA 90 bp AGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAGCCTTATTGTATTACTaGCCATCAAGGTTCAATGTG +
Preference number: 5 (lower is better)
Translates to: RERSGFKHYSAWHHKCSKALLYY*PSRFNV
Trigger: CACATTGAACCTTGATGGCAAGTAATACAATAAGGC...TTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CAA 90 bp GCCATGGAGCATATTGGCAATTTGGTTCTGACTCCTAAAATCATTTTACTATACTTTACACTGCCTACATaGGAGACTGCAAGCAGTGGA +
Preference number: 5 (lower is better)
Translates to: AMEHIGNLVLTPKIILLYFTLPT*ETASSG
Trigger: TCCACTGCTTGCAGTCTCCAATGTAGGCAGTGTAAA...GTATAGTAAAATGATTTTAGGAGTCAGAACCAAATTGCCAATATGCTCCATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CAA 90 bp TATGTTACATTCTCTAGGGAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATGAGCATATTGGCAATTaGGTTCTGACTCCTAAAATC +
Preference number: 5 (lower is better)
Translates to: YVTFSRERSGFKHYSAWHEHIGN*VLTPKI
Trigger: GATTTTAGGAGTCAGAACCAAATTGCCAATATGCTC...ATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTCCCTAGAGAATGTAACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CAA 90 bp GCCATGGAGCATATTGGCAATTTGGTTCTGACTCCTAAAATCATTTTACTATACAAACAGGGGAGGAATTaGCCATCTTCTTCTGTGATC +
Preference number: 5 (lower is better)
Translates to: AMEHIGNLVLTPKIILLYKQGRN*PSSSVI
Trigger: GATCACAGAAGAAGATGGCAAATTCCTCCCCTGTTT...GTATAGTAAAATGATTTTAGGAGTCAGAACCAAATTGCCAATATGCTCCATGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CAA 90 bp GCCATGGAGCATATTGGCAATTTGGTTCTGACTCCTAAAATCATTTTACTATACAGTGAAATAGGTCTGTaGGCACAGGTAAGAAGGAAG +
Preference number: 5 (lower is better)
Translates to: AMEHIGNLVLTPKIILLYSEIGL*AQVRRK
Trigger: CTTCCTTCTTACCTGTGCCAACAGACCTATTTCACT...GTATAGTAAAATGATTTTAGGAGTCAGAACCAAATTGCCAATATGCTCCATGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CAA 90 bp GATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAACAGAAAGAGCATATTGGCAATTaGGTTCTGACTCCTAAAATC +
Preference number: 5 (lower is better)
Translates to: DRVSSITVPGIISVQKQKEHIGN*VLTPKI
Trigger: GATTTTAGGAGTCAGAACCAAATTGCCAATATGCTC...TTTCTGTTTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS-3UTR CAA 90 bp GAAAGATCGGGTTTCAAGCATTACAGTGCCTGGCATCATAAGTGTTCAAAAACATACCCAGTAAAGTCATaGACCAAACAAGGTATTTTC +
Preference number: 5 (lower is better)
Translates to: ERSGFKHYSAWHHKCSKTYPVKS*TKQGIF
Trigger: GAAAATACCTTGTTTGGTCAATGACTTTACTGGGTA...TGTTTTTGAACACTTATGATGCCAGGCACTGTAATGCTTGAAACCCGATCTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614790.5
ENST00000614868.2
CDS GCA 72 bp CTCACAGTTTGCTGGGTCTTGGGGACCGTGACCTTCTaGCCAGGGATCGAGACCTCCTGTCCCGGGACCCTG +
Preference number: 6 (lower is better)
Translates to: LTVCWVLGTVTF*PGIETSCPGTL
Trigger: CAGGGTCCCGGGACAGGAGGTCTCGATCCCTGGGCAGAAGGTCACGGTCCCCAAGACCCAGCAAACTGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611845.1
ENST00000633577.1
CDS TCA 72 bp ATCCCACACTCACAGTTTGCTGGGTCTTGGGGACCGTaGCCTTCTGCCCAGGGATCGAGACCTCCTGTCCCG +
Preference number: 6 (lower is better)
Translates to: IPHSQFAGSWGP*PSAQGSRPPVP
Trigger: CGGGACAGGAGGTCTCGATCCCTGGGCAGAAGGTCACGGTCCCCAAGACCCAGCAAACTGTGAGTGTGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611845.1
ENST00000633577.1
CDS GCA 72 bp GCTACCTCGCGGGATCTAGTCCCAGGAGCCGTCAACTaGCAGTTTCACCACCGCTCTAGAGGTCACTTCCGG +
Preference number: 6 (lower is better)
Translates to: ATSRDLVPGAVN*QFHHRSRGHFR
Trigger: CCGGAAGTGACCTCTAGAGCGGTGGTGAAACTGGCAGTTGACGGCTCCTGGGACTAGATCCCGCGAGGTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614868.2
CDS CAA 90 bp CGTCGCGGAACGATGACGTACAGGGCTCGGTCGCGCTTTGTGACGTaGGCGTTACTTGCAGATTTTGCAAAGGTCCGGGCTCCGCTGTCG +
Preference number: 6 (lower is better)
Translates to: RRGTMTYRARSRFVT*ALLADFAKVRAPLS
Trigger: CGACAGCGGAGCCCGGACCTTTGCAAAATCTGCAAGTAACGCCAACGTCACAAAGCGCGACCGAGCCCTGTACGTCATCGTTCCGCGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614868.2
CDS GCA 72 bp CAGGGCTCGGTCGCGCTTTGTGACGTTGGCGTTACTTaGAGATTTTGCAAAGGTCCGGGCTCCGCTGTCGAG +
Preference number: 6 (lower is better)
Translates to: QGSVALCDVGVT*RFCKGPGSAVE
Trigger: CTCGACAGCGGAGCCCGGACCTTTGCAAAATCTGCAAGTAACGCCAACGTCACAAAGCGCGACCGAGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614868.2
CDS TCA 72 bp ATCTCTTCCCGGGCTCTCTCTTCTCGCAGCTCCCGCTaGAGCTCCTCAATCTTCTTCCGCTCAGCCTCATGC +
Preference number: 6 (lower is better)
Translates to: ISSRALSSRSSR*SSSIFFRSASC
Trigger: GCATGAGGCTGAGCGGAAGAAGATTGAGGAGCTTCAGCGGGAGCTGCGAGAAGAGAGAGCCCGGGAAGAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000619818.4
ENST00000622665.1
ENST00000631731.1
ENST00000632717.1
ENST00000633741.1
CDS GCA 72 bp AGATTCTCGCGGGATCTAGTCCCAGGAGCCGTCAACTaGCAGTTTCACCACCGCTCTAGAGGTCACTTCCGG +
Preference number: 6 (lower is better)
Translates to: RFSRDLVPGAVN*QFHHRSRGHFR
Trigger: CCGGAAGTGACCTCTAGAGCGGTGGTGAAACTGGCAGTTGACGGCTCCTGGGACTAGATCCCGCGAGAATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619818.4
ENST00000633741.1
CDS CAA 72 bp TTCCCAGTGAATCCCACACTCACAGTTTGCTGGGTCTaGGGGACCGTGACCTTCTGCCCAGGGATCGAGACC +
Preference number: 6 (lower is better)
Translates to: FPVNPTLTVCWV*GTVTFCPGIET
Trigger: GGTCTCGATCCCTGGGCAGAAGGTCACGGTCCCCAAGACCCAGCAAACTGTGAGTGTGGGATTCACTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611845.1
ENST00000633577.1
CDS CAA 90 bp ACAGGTTATTTCCCAGTGAATCCCACACTCACAGTTTGCTGGGTCTaGGGGACCGTGACCTTCTGCCCAGGGATCGAGACCTCCTGTCCC +
Preference number: 6 (lower is better)
Translates to: TGYFPVNPTLTVCWV*GTVTFCPGIETSCP
Trigger: GGGACAGGAGGTCTCGATCCCTGGGCAGAAGGTCACGGTCCCCAAGACCCAGCAAACTGTGAGTGTGGGATTCACTGGGAAATAACCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611845.1
ENST00000633577.1
CDS CAA 90 bp CCCCACAGTCACAGGTTATTTCCCAGTGAATCCCACACTCACAGTTaGCTGGGTCTTGGGGACCGTGACCTTCTGCCCAGGGATCGAGAC +
Preference number: 6 (lower is better)
Translates to: PHSHRLFPSESHTHS*LGLGDRDLLPRDRD
Trigger: GTCTCGATCCCTGGGCAGAAGGTCACGGTCCCCAAGACCCAGCAAACTGTGAGTGTGGGATTCACTGGGAAATAACCTGTGACTGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000611845.1
ENST00000633577.1
CDS CCA 72 bp GGTTATTTCCCAGTGAATCCCACACTCACAGTTTGCTaGGTCTTGGGGACCGTGACCTTCTGCCCAGGGATC +
Preference number: 6 (lower is better)
Translates to: GYFPVNPTLTVC*VLGTVTFCPGI
Trigger: GATCCCTGGGCAGAAGGTCACGGTCCCCAAGACCCAGCAAACTGTGAGTGTGGGATTCACTGGGAAATAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611845.1
ENST00000633577.1
CDS CAA 72 bp ACGATGACGTACAGGGCTCGGTCGCGCTTTGTGACGTaGGCGTTACTTGCAGATTTTGCAAAGGTCCGGGCT +
Preference number: 6 (lower is better)
Translates to: TMTYRARSRFVT*ALLADFAKVRA
Trigger: AGCCCGGACCTTTGCAAAATCTGCAAGTAACGCCAACGTCACAAAGCGCGACCGAGCCCTGTACGTCATCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614868.2
CDS GCA 72 bp AGCTCCTCAATCTTCTTCCGCTCAGCCTCATGCTTCTaGTCGGCCTTCCACACTTTCTCCACATTCCTGAGG +
Preference number: 6 (lower is better)
Translates to: SSSIFFRSASCF*SAFHTFSTFLR
Trigger: CCTCAGGAATGTGGAGAAAGTGTGGAAGGCCGAGCAGAAGCATGAGGCTGAGCGGAAGAAGATTGAGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000614790.5
ENST00000614868.2
ENST00000619299.4
ENST00000619818.4
ENST00000622665.1
ENST00000631731.1
ENST00000632717.1
ENST00000633741.1
CDS TCA 72 bp GAGTCTTTATATTATGCTTTCATTTCCAAGATGACTTaGCGGCCCCAACATCCTCCGCATAGCGCTGCATCT +
Preference number: 6 (lower is better)
Translates to: ESLYYAFISKMT*RPQHPPHSAAS
Trigger: AGATGCAGCGCTATGCGGAGGATGTTGGGGCCGTCAAGTCATCTTGGAAATGAAAGCATAATATAAAGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000619299.4
ENST00000622665.1
ENST00000631731.1
ENST00000632717.1
CDS CCA 72 bp AGAGCTCCCAAAGCACAGAATACACCTACAGATATGTaGCTTTGGATGCCTGAGCTTTACATTGAGGTGGAA +
Preference number: 6 (lower is better)
Translates to: RAPKAQNTPTDM*LWMPELYIEVE
Trigger: TTCCACCTCAATGTAAAGCTCAGGCATCCAAAGCCACATATCTGTAGGTGTATTCTGTGCTTTGGGAGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611845.1
ENST00000633577.1
CDS CCA 72 bp AGGAAATACCAAAGCAAAGACATTTGGGAAAGTCAATaGACGGACATCACCAAAAGCAAAAACAAATGCCTG +
Preference number: 6 (lower is better)
Translates to: RKYQSKDIWESQ*TDITKSKNKCL
Trigger: CAGGCATTTGTTTTTGCTTTTGGTGATGTCCGTCCATTGACTTTCCCAAATGTCTTTGCTTTGGTATTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000611845.1
ENST00000633577.1