Pregenerated sensors for CWC15 (Homo sapiens)
Ensembl gene IDs: ENSG00000150316Ensembl transcript IDs: ENST00000279839.8, ENST00000539856.5, ENST00000542165.1, ENST00000542907.5, ENST00000616442.4, ENST00000621358.4
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATCTCTTTCAAAGGAAACATGGCAGTTGAGTATCCAGAACACAAGTaGGTACCGTATACTTTAAAAGAATGCTTACAGAGCTCTCCTCTT | + |
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Preference number: 1 (lower is better) Translates to: ISFKGNMAVEYPEHK*VPYTLKECLQSSPL Trigger: AAGAGGAGAGCTCTGTAAGCATTCTTTTAAAGTATACGGTACTCACTTGTGTTCTGGATACTCAACTGCCATGTTTCCTTTGAAAGAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| 3UTR TCA 90 bp | CATGTCAGGTGCATATTCAATCTCTTTCAAAGGAAACATGGCAGTTaGGTATCCAGAACACAAGTGAGTACCGTATACTTTAAAAGAATG | + |
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Preference number: 1 (lower is better) Translates to: HVRCIFNLFQRKHGS*VSRTQVSTVYFKRM Trigger: CATTCTTTTAAAGTATACGGTACTCACTTGTGTTCTGGATACTCAACTGCCATGTTTCCTTTGAAAGAGATTGAATATGCACCTGACATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| 3UTR-3UTR CCA 90 bp | ACGCCTGGGGTGCTTACTGTCAATGACACTCCTCCACACCAACATGTGGTCCAATTGGAGAATGCAAACTaGGTTAAACCTATTCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: TPGVLTVNDTPPHQHVVQLENAN*VKPIPK Trigger: CTTGGGAATAGGTTTAACCCAGTTTGCATTCTCCAA...TTGGACCACATGTTGGTGTGGAGGAGTGTCATTGACAGTAAGCACCCCAGGCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| 3UTR-3UTR CCA 90 bp | GTGCTTACTGTCAATGACACTCCTCCACACCAACATGTGGTCCAAAATAGAATCATTCCAACAAAAAGTTaGGCACCCAGATTTGGTTAT | + |
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Preference number: 2 (lower is better) Translates to: VLTVNDTPPHQHVVQNRIIPTKS*APRFGY Trigger: ATAACCAAATCTGGGTGCCCAACTTTTTGTTGGAAT...GATTCTATTTTGGACCACATGTTGGTGTGGAGGAGTGTCATTGACAGTAAGCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| 3UTR GCA 72 bp | GCGATACCCAATGCTCTCCCAGACACACGCCTGGGGTaGTTACTGTCAATGACACTCCTCCACACCAACATG | + |
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Preference number: 3 (lower is better) Translates to: AIPNALPDTRLG*LLSMTLLHTNM Trigger: CATGTTGGTGTGGAGGAGTGTCATTGACAGTAAGCACCCCAGGCGTGTGTCTGGGAGAGCATTGGGTATCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| 3UTR-3UTR CAA 90 bp | CGCCTGGGGTGCTTACTGTCAATGACACTCCTCCACACCAACATGTGGTCCAAAAATTCCAACAAAAAGTaGGGCACCCAGATTTGGTTA | + |
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Preference number: 3 (lower is better) Translates to: RLGCLLSMTLLHTNMWSKNSNKK*GTQIWL Trigger: TAACCAAATCTGGGTGCCCAACTTTTTGTTGGAATT...TTTGGACCACATGTTGGTGTGGAGGAGTGTCATTGACAGTAAGCACCCCAGGCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| 3UTR CCA 72 bp | TGCTTACTGTCAATGACACTCCTCCACACCAACATGTaGTCCAAAATAGAATCCCTCTCATCTTCCATTACA | + |
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Preference number: 3 (lower is better) Translates to: CLLSMTLLHTNM*SKIESLSSSIT Trigger: TGTAATGGAAGATGAGAGGGATTCTATTTTGGACCACATGTTGGTGTGGAGGAGTGTCATTGACAGTAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| 3UTR-3UTR CAA 90 bp | CTGTCAATGACACTCCTCCACACCAACATGTGGTCCAAAATAGAATCCCTCTCATTATTACAGGCAGATTaGCTTTTCCCAGGAAAACAT | + |
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Preference number: 3 (lower is better) Translates to: LSMTLLHTNMWSKIESLSLLQAD*LFPGKH Trigger: ATGTTTTCCTGGGAAAAGCAAATCTGCCTGTAATAA...TGAGAGGGATTCTATTTTGGACCACATGTTGGTGTGGAGGAGTGTCATTGACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| 3UTR TCA 72 bp | AAAGGAAACATGGCAGTTGAGTATCCAGAACACAAGTaGGTACCGTATACTTTAAAAGAATGCTTACAGAGC | + |
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Preference number: 3 (lower is better) Translates to: KGNMAVEYPEHK*VPYTLKECLQS Trigger: GCTCTGTAAGCATTCTTTTAAAGTATACGGTACTCACTTGTGTTCTGGATACTCAACTGCCATGTTTCCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| CDS-3UTR TCA 90 bp | GAAGTGAGCGATACCCAATGCTCTCCCAGACACACGCCTGGGGTGCTTACTGTCACTTTGAAGTTGGCCTaGGGCTGGGATGGGCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: EVSDTQCSPRHTPGVLTVTLKLA*GWDGPV Trigger: CACTGGCCCATCCCAGCCTCAGGCCAACTTCAAAGT...GACAGTAAGCACCCCAGGCGTGTGTCTGGGAGAGCATTGGGTATCGCTCACTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| CDS-3UTR GCA 90 bp | CGCCTGGGGTGCTTACTGTCAATGACACTCCTCCACACCAACATGTGGTCCAAAGTGAGCGATACCCAATaGTCTCCCAGACACACGCCT | + |
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Preference number: 4 (lower is better) Translates to: RLGCLLSMTLLHTNMWSKVSDTQ*SPRHTP Trigger: AGGCGTGTGTCTGGGAGAGCATTGGGTATCGCTCAC...TTTGGACCACATGTTGGTGTGGAGGAGTGTCATTGACAGTAAGCACCCCAGGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| CDS-3UTR CCA 90 bp | AATGCTCTCCCAGACACACGCCTGGGGTGCTTACTGTCAATGACACTCCTCCACGGCAGGTTCAAAGGTTaGCCTGGCTGCTGTTGTCAT | + |
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Preference number: 4 (lower is better) Translates to: NALPDTRLGCLLSMTLLHGRFKG*PGCCCH Trigger: ATGACAACAGCAGCCAGGCCAACCTTTGAACCTGCC...GTGGAGGAGTGTCATTGACAGTAAGCACCCCAGGCGTGTGTCTGGGAGAGCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| CDS-3UTR GCA 90 bp | ACGCCTGGGGTGCTTACTGTCAATGACACTCCTCCACACCAACATGTGGTCCAAGACACACGCCTGGGGTaGTTACTGTCAATGACACTC | + |
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Preference number: 4 (lower is better) Translates to: TPGVLTVNDTPPHQHVVQDTRLG*LLSMTL Trigger: GAGTGTCATTGACAGTAAGCACCCCAGGCGTGTGTC...TTGGACCACATGTTGGTGTGGAGGAGTGTCATTGACAGTAAGCACCCCAGGCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| CDS-3UTR GCA 90 bp | CTGTCAATGACACTCCTCCACACCAACATGTGGTCCAAAATAGAATCCCTCTCACTGGCCGAGGTCCGATaGAGCAGGCTCCGAAGATCA | + |
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Preference number: 4 (lower is better) Translates to: LSMTLLHTNMWSKIESLSLAEVR*SRLRRS Trigger: TGATCTTCGGAGCCTGCTGCATCGGACCTCGGCCAG...TGAGAGGGATTCTATTTTGGACCACATGTTGGTGTGGAGGAGTGTCATTGACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| CDS-3UTR CCA 90 bp | ACGCCTGGGGTGCTTACTGTCAATGACACTCCTCCACACCAACATGTGGTCCAAGTCATCTTTTATGACTaGCCGAGGTCCGATGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: TPGVLTVNDTPPHQHVVQVIFYD*PRSDAA Trigger: TGCTGCATCGGACCTCGGCCAGTCATAAAAGATGAC...TTGGACCACATGTTGGTGTGGAGGAGTGTCATTGACAGTAAGCACCCCAGGCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| CDS-3UTR TCA 90 bp | CCCAGACACACGCCTGGGGTGCTTACTGTCAATGACACTCCTCCACACCAACATCTTTTGCACAGTTCTTaGAGACAACGTCATCATCCC | + |
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Preference number: 4 (lower is better) Translates to: PRHTPGVLTVNDTPPHQHLLHSS*RQRHHP Trigger: GGGATGATGACGTTGTCTTCAAGAACTGTGCAAAAG...ATGTTGGTGTGGAGGAGTGTCATTGACAGTAAGCACCCCAGGCGTGTGTCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| CDS-3UTR CCA 90 bp | CTGTCAATGACACTCCTCCACACCAACATGTGGTCCAAAATAGAATCCCTCTCATTCCCCTTCCACCTCTaGCAGGTTCAAAGGTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: LSMTLLHTNMWSKIESLSFPFHL*QVQRLA Trigger: GGCCAACCTTTGAACCTGCCAGAGGTGGAAGGGGAA...TGAGAGGGATTCTATTTTGGACCACATGTTGGTGTGGAGGAGTGTCATTGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| CDS-3UTR CCA 90 bp | AATGACACTCCTCCACACCAACATGTGGTCCAAAATAGAATCCCTCTCATCTTCGGCCTGAGGCTGGGATaGGCCAGTGAGATTAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: NDTPPHQHVVQNRIPLIFGLRLG*ASEIKE Trigger: CTCCTTAATCTCACTGGCCCATCCCAGCCTCAGGCC...GAAGATGAGAGGGATTCTATTTTGGACCACATGTTGGTGTGGAGGAGTGTCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| CDS-3UTR TCA 90 bp | AATGCTCTCCCAGACACACGCCTGGGGTGCTTACTGTCAATGACACTCCTCCACTCCATGAACTTTTTGTaGAATTCAGATCGCAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: NALPDTRLGCLLSMTLLHSMNFL*NSDRSV Trigger: CACACTGCGATCTGAATTTCACAAAAAGTTCATGGA...GTGGAGGAGTGTCATTGACAGTAAGCACCCCAGGCGTGTGTCTGGGAGAGCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| CDS-3UTR GCA 90 bp | AATGCTCTCCCAGACACACGCCTGGGGTGCTTACTGTCAATGACACTCCTCCACGTCATCTACACCTTTTaGACAGTTCTTGAAGACAAC | + |
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Preference number: 4 (lower is better) Translates to: NALPDTRLGCLLSMTLLHVIYTF*TVLEDN Trigger: GTTGTCTTCAAGAACTGTGCAAAAGGTGTAGATGAC...GTGGAGGAGTGTCATTGACAGTAAGCACCCCAGGCGTGTGTCTGGGAGAGCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| CDS-3UTR GCA 90 bp | CCCAGACACACGCCTGGGGTGCTTACTGTCAATGACACTCCTCCACACCAACATAGGCTTTGCACTAAATaGATGTCAGGTGCATATTCA | + |
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Preference number: 4 (lower is better) Translates to: PRHTPGVLTVNDTPPHQHRLCTK*MSGAYS Trigger: TGAATATGCACCTGACATGCATTTAGTGCAAAGCCT...ATGTTGGTGTGGAGGAGTGTCATTGACAGTAAGCACCCCAGGCGTGTGTCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| CDS-3UTR CCA 90 bp | CCCAGACACACGCCTGGGGTGCTTACTGTCAATGACACTCCTCCACACCAACATTTGGAGAATGCAAACTaGGTTAAACCTATTCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: PRHTPGVLTVNDTPPHQHLENAN*VKPIPK Trigger: CTTGGGAATAGGTTTAACCCAGTTTGCATTCTCCAA...ATGTTGGTGTGGAGGAGTGTCATTGACAGTAAGCACCCCAGGCGTGTGTCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| CDS-3UTR TCA 90 bp | CTGTCAATGACACTCCTCCACACCAACATGTGGTCCAAAATAGAATCCCTCTCAAAGTACCTGCAGAAGTaGGCGATACCCAATGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: LSMTLLHTNMWSKIESLSKYLQK*AIPNAL Trigger: GAGAGCATTGGGTATCGCTCACTTCTGCAGGTACTT...TGAGAGGGATTCTATTTTGGACCACATGTTGGTGTGGAGGAGTGTCATTGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| CDS-3UTR GCA 90 bp | ACGCCTGGGGTGCTTACTGTCAATGACACTCCTCCACACCAACATGTGGTCCAATTCTGCAAGAAGAGCTaGAGTATCATCATCATCACT | + |
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Preference number: 4 (lower is better) Translates to: TPGVLTVNDTPPHQHVVQFCKKS*SIIIIT Trigger: AGTGATGATGATGATACTGCAGCTCTTCTTGCAGAA...TTGGACCACATGTTGGTGTGGAGGAGTGTCATTGACAGTAAGCACCCCAGGCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| CDS-3UTR TCA 90 bp | AATGACACTCCTCCACACCAACATGTGGTCCAAAATAGAATCCCTCTCATCTTCCTTCCAACTCTCTCCTaGAGTCACGGTTACGAACCT | + |
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Preference number: 4 (lower is better) Translates to: NDTPPHQHVVQNRIPLIFLPTLS*SHGYEP Trigger: AGGTTCGTAACCGTGACTTCAGGAGAGAGTTGGAAG...GAAGATGAGAGGGATTCTATTTTGGACCACATGTTGGTGTGGAGGAGTGTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| CDS-3UTR CCA 90 bp | AATGACACTCCTCCACACCAACATGTGGTCCAAAATAGAATCCCTCTCATCTTCCATCTGCATCAAGGTTaGCGGCAGGAATCTGGTCTA | + |
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Preference number: 4 (lower is better) Translates to: NDTPPHQHVVQNRIPLIFHLHQG*RQESGL Trigger: TAGACCAGATTCCTGCCGCCAACCTTGATGCAGATG...GAAGATGAGAGGGATTCTATTTTGGACCACATGTTGGTGTGGAGGAGTGTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| CDS-3UTR TCA 90 bp | CTGTCAATGACACTCCTCCACACCAACATGTGGTCCAAAATAGAATCCCTCTCATCTTCAGGGGCATCCTaGGTAGTCTGTCTGTATTTT | + |
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Preference number: 4 (lower is better) Translates to: LSMTLLHTNMWSKIESLSSSGAS*VVCLYF Trigger: AAAATACAGACAGACTACTCAGGATGCCCCTGAAGA...TGAGAGGGATTCTATTTTGGACCACATGTTGGTGTGGAGGAGTGTCATTGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| CDS-3UTR CCA 90 bp | CTGTCAATGACACTCCTCCACACCAACATGTGGTCCAAAATAGAATCCCTCTCACTCCACACCAACATGTaGTCCAAAATAGAATCCCTC | + |
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Preference number: 4 (lower is better) Translates to: LSMTLLHTNMWSKIESLSLHTNM*SKIESL Trigger: GAGGGATTCTATTTTGGACCACATGTTGGTGTGGAG...TGAGAGGGATTCTATTTTGGACCACATGTTGGTGTGGAGGAGTGTCATTGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| CDS-3UTR TCA 90 bp | GTGCTTACTGTCAATGACACTCCTCCACACCAACATGTGGTCCAAAATAGAATCAGGAAACATGGCAGTTaGGTATCCAGAACACAAGTG | + |
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Preference number: 4 (lower is better) Translates to: VLTVNDTPPHQHVVQNRIRKHGS*VSRTQV Trigger: CACTTGTGTTCTGGATACTCAACTGCCATGTTTCCT...GATTCTATTTTGGACCACATGTTGGTGTGGAGGAGTGTCATTGACAGTAAGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| CDS-3UTR GCA 90 bp | CTGTCAATGACACTCCTCCACACCAACATGTGGTCCAAAATAGAATCCCTCTCAAGCTTTCTCAGGCTTTaGACTAAATGCATGTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: LSMTLLHTNMWSKIESLSSFLRL*TKCMSG Trigger: ACCTGACATGCATTTAGTGCAAAGCCTGAGAAAGCT...TGAGAGGGATTCTATTTTGGACCACATGTTGGTGTGGAGGAGTGTCATTGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| CDS-3UTR CCA 90 bp | CTGTCAATGACACTCCTCCACACCAACATGTGGTCCAAAATAGAATCCCTCTCATGTATGTTCTCGGGTTaGACGATCCCTATTTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: LSMTLLHTNMWSKIESLSCMFSG*TIPIFL Trigger: GAGAAAAATAGGGATCGTCCAACCCGAGAACATACA...TGAGAGGGATTCTATTTTGGACCACATGTTGGTGTGGAGGAGTGTCATTGACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| CDS-3UTR GCA 90 bp | GTGCTTACTGTCAATGACACTCCTCCACACCAACATGTGGTCCAAAATAGAATCGAGAGGGTAGGTCTCTaGTTGAATACTGCTTTGAAA | + |
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Preference number: 4 (lower is better) Translates to: VLTVNDTPPHQHVVQNRIERVGL*LNTALK Trigger: TTTCAAAGCAGTATTCAAGCAGAGACCTACCCTCTC...GATTCTATTTTGGACCACATGTTGGTGTGGAGGAGTGTCATTGACAGTAAGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| CDS-3UTR CCA 90 bp | TTTGCACTAAATGCATGTCAGGTGCATATTCAATCTCTTTCAAAGGAAACATGGGTTCTTGTTCCTTCCTaGCCTGCTCTTCAGCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: FALNACQVHIQSLSKETWVLVPS*PALQLF Trigger: AAAGAGCTGAAGAGCAGGCCAGGAAGGAACAAGAAC...CCATGTTTCCTTTGAAAGAGATTGAATATGCACCTGACATGCATTTAGTGCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| CDS-3UTR CCA 90 bp | TTTGCACTAAATGCATGTCAGGTGCATATTCAATCTCTTTCAAAGGAAACATGGGTTCAAAGGTTGGCCTaGCTGCTGTTGTCATCTTTT | + |
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Preference number: 4 (lower is better) Translates to: FALNACQVHIQSLSKETWVQRLA*LLLSSF Trigger: AAAAGATGACAACAGCAGCCAGGCCAACCTTTGAAC...CCATGTTTCCTTTGAAAGAGATTGAATATGCACCTGACATGCATTTAGTGCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| CDS-3UTR GCA 90 bp | GTATCCAGAACACAAGTGAGTACCGTATACTTTAAAAGAATGCTTACAGAGCTCTCTCTGCTTGAATACTaGTTTGAAAGTTGGCTCAAA | + |
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Preference number: 4 (lower is better) Translates to: VSRTQVSTVYFKRMLTELSLLEY*FESWLK Trigger: TTTGAGCCAACTTTCAAAGCAGTATTCAAGCAGAGA...GAGCTCTGTAAGCATTCTTTTAAAGTATACGGTACTCACTTGTGTTCTGGATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| CDS-3UTR TCA 90 bp | TTTGCACTAAATGCATGTCAGGTGCATATTCAATCTCTTTCAAAGGAAACATGGTATTTTATCTTTGTATaGGAGGGTAGGTCTCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: FALNACQVHIQSLSKETWYFIFV*EGRSLL Trigger: AAGCAGAGACCTACCCTCTCATACAAAGATAAAATA...CCATGTTTCCTTTGAAAGAGATTGAATATGCACCTGACATGCATTTAGTGCAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| CDS-3UTR CCA 90 bp | TTTGCACTAAATGCATGTCAGGTGCATATTCAATCTCTTTCAAAGGAAACATGGATTCCAACAAAAAGTTaGGCACCCAGATTTGGTTAT | + |
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Preference number: 4 (lower is better) Translates to: FALNACQVHIQSLSKETWIPTKS*APRFGY Trigger: ATAACCAAATCTGGGTGCCCAACTTTTTGTTGGAAT...CCATGTTTCCTTTGAAAGAGATTGAATATGCACCTGACATGCATTTAGTGCAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| CDS GCA 90 bp | GCTCCAGACGCGCCTGACAGGCACTCGGTTCCGCCCCTAGCCCGCTaGTCCAGGGCCTCCACCGCCCGCGCTCTGCACTCTGCCGCCGAC | + |
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Preference number: 5 (lower is better) Translates to: APDAPDRHSVPPLAR*SRASTARALHSAAD Trigger: GTCGGCGGCAGAGTGCAGAGCGCGGGCGGTGGAGGCCCTGGAGCAGCGGGCTAGGGGCGGAACCGAGTGCCTGTCAGGCGCGTCTGGAGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000542165.1 ENST00000542907.5 |
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| CDS GCA 90 bp | CCTAGCCCGCTGCTCCAGGGCCTCCACCGCCCGCGCTCTGCACTCTaGCGCCGACTCCGACCCCAACTGCCCTTTCCCGTCCCATCGCGA | + |
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Preference number: 5 (lower is better) Translates to: PSPLLQGLHRPRSAL*RRLRPQLPFPVPSR Trigger: TCGCGATGGGACGGGAAAGGGCAGTTGGGGTCGGAGTCGGCGGCAGAGTGCAGAGCGCGGGCGGTGGAGGCCCTGGAGCAGCGGGCTAGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000542165.1 ENST00000542907.5 |
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| CDS TCA 90 bp | GTACGCTGCGATCTCCTCGGCGGGCCCAAGAGCTCCAGACGCGCCTaGCAGGCACTCGGTTCCGCCCCTAGCCCGCTGCTCCAGGGCCTC | + |
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Preference number: 5 (lower is better) Translates to: VRCDLLGGPKSSRRA*QALGSAPSPLLQGL Trigger: GAGGCCCTGGAGCAGCGGGCTAGGGGCGGAACCGAGTGCCTGTCAGGCGCGTCTGGAGCTCTTGGGCCCGCCGAGGAGATCGCAGCGTAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000542165.1 ENST00000542907.5 |
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| CDS GCA 90 bp | CCTTTCCCGTCCCATCGCGATAAGAAAGATAATCTCCTATCCTCTTaGCGCTCACACTGGCCGAGGTCCGATGCAGCAGGCTCCGAAGAT | + |
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Preference number: 5 (lower is better) Translates to: PFPSHRDKKDNLLSS*RSHWPRSDAAGSED Trigger: ATCTTCGGAGCCTGCTGCATCGGACCTCGGCCAGTGTGAGCGGCAAGAGGATAGGAGATTATCTTTCTTATCGCGATGGGACGGGAAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000542165.1 ENST00000542907.5 |
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| CDS CCA 90 bp | CATCGCGATAAGAAAGATAATCTCCTATCCTCTTGCCGCTCACACTaGCCGAGGTCCGATGCAGCAGGCTCCGAAGATCATACAGACGCC | + |
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Preference number: 5 (lower is better) Translates to: HRDKKDNLLSSCRSH*PRSDAAGSEDHTDA Trigger: GGCGTCTGTATGATCTTCGGAGCCTGCTGCATCGGACCTCGGCCAGTGTGAGCGGCAAGAGGATAGGAGATTATCTTTCTTATCGCGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542165.1 |
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| CDS-3UTR CAA 90 bp | AATGCTCTCCCAGACACACGCCTGGGGTGCTTACTGTCAATGACACTCCTCCACTCATCTGCATCAAGGTaGGCGGCAGGAATCTGGTCT | + |
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Preference number: 5 (lower is better) Translates to: NALPDTRLGCLLSMTLLHSSASR*AAGIWS Trigger: AGACCAGATTCCTGCCGCCAACCTTGATGCAGATGA...GTGGAGGAGTGTCATTGACAGTAAGCACCCCAGGCGTGTGTCTGGGAGAGCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| CDS-3UTR CAA 90 bp | GAAGTGAGCGATACCCAATGCTCTCCCAGACACACGCCTGGGGTGCTTACTGTCTTCAGCTTTTTGTTCTaGTTCCTTCCTGGCCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: EVSDTQCSPRHTPGVLTVFSFLF*FLPGLL Trigger: GAGCAGGCCAGGAAGGAACAAGAACAAAAAGCTGAA...GACAGTAAGCACCCCAGGCGTGTGTCTGGGAGAGCATTGGGTATCGCTCACTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| CDS-3UTR CAA 90 bp | CCCAGACACACGCCTGGGGTGCTTACTGTCAATGACACTCCTCCACACCAACATCCTTTTGCACAGTTCTaGAAGACAACGTCATCATCC | + |
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Preference number: 5 (lower is better) Translates to: PRHTPGVLTVNDTPPHQHPFAQF*KTTSSS Trigger: GGATGATGACGTTGTCTTCAAGAACTGTGCAAAAGG...ATGTTGGTGTGGAGGAGTGTCATTGACAGTAAGCACCCCAGGCGTGTGTCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| CDS-3UTR CAA 90 bp | AATGCTCTCCCAGACACACGCCTGGGGTGCTTACTGTCAATGACACTCCTCCACAAGGAAACATGGCAGTaGAGTATCCAGAACACAAGT | + |
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Preference number: 5 (lower is better) Translates to: NALPDTRLGCLLSMTLLHKETWQ*SIQNTS Trigger: ACTTGTGTTCTGGATACTCAACTGCCATGTTTCCTT...GTGGAGGAGTGTCATTGACAGTAAGCACCCCAGGCGTGTGTCTGGGAGAGCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| CDS GCA 90 bp | GGAGGTTGTATGTTCTCGGGTTGGACGATCCCTATTTTTCTCTCTTaGAGCAGCTCTCTCTCTTTCTTCCAACTCTCTCCTGAAGTCACG | + |
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Preference number: 5 (lower is better) Translates to: GGCMFSGWTIPIFLS*SSSLSFFQLSPEVT Trigger: CGTGACTTCAGGAGAGAGTTGGAAGAAAGAGAGAGAGCTGCTGCAAGAGAGAAAAATAGGGATCGTCCAACCCGAGAACATACAACCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000279839.8 ENST00000539856.5 ENST00000542907.5 |
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| CDS GCA 90 bp | GATAGTGTTGGTACCTCGGGTTGGACGATCCCTATTTTTCTCTCTTaGAGCAGCTCTCTCTCTTTCTTCCAACTCTCTCCTGAAGTCACG | + |
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Preference number: 5 (lower is better) Translates to: DSVGTSGWTIPIFLS*SSSLSFFQLSPEVT Trigger: CGTGACTTCAGGAGAGAGTTGGAAGAAAGAGAGAGAGCTGCTGCAAGAGAGAAAAATAGGGATCGTCCAACCCGAGGTACCAACACTATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000542165.1 ENST00000621358.4 |
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| CDS-3UTR CAA 90 bp | ACGCCTGGGGTGCTTACTGTCAATGACACTCCTCCACACCAACATGTGGTCCAATTGTATGTTCTCGGGTaGGACGATCCCTATTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: TPGVLTVNDTPPHQHVVQLYVLG*DDPYFS Trigger: AGAAAAATAGGGATCGTCCAACCCGAGAACATACAA...TTGGACCACATGTTGGTGTGGAGGAGTGTCATTGACAGTAAGCACCCCAGGCGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| CDS-3UTR CAA 90 bp | AATGCTCTCCCAGACACACGCCTGGGGTGCTTACTGTCAATGACACTCCTCCACAATTCCAACAAAAAGTaGGGCACCCAGATTTGGTTA | + |
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Preference number: 5 (lower is better) Translates to: NALPDTRLGCLLSMTLLHNSNKK*GTQIWL Trigger: TAACCAAATCTGGGTGCCCAACTTTTTGTTGGAATT...GTGGAGGAGTGTCATTGACAGTAAGCACCCCAGGCGTGTGTCTGGGAGAGCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| CDS-3UTR CAA 90 bp | GTGCTTACTGTCAATGACACTCCTCCACACCAACATGTGGTCCAAAATAGAATCACACTGAAGAGGAGGTaGTATGTTCTCGGGTTGGAC | + |
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Preference number: 5 (lower is better) Translates to: VLTVNDTPPHQHVVQNRITLKRR*YVLGLD Trigger: GTCCAACCCGAGAACATACAACCTCCTCTTCAGTGT...GATTCTATTTTGGACCACATGTTGGTGTGGAGGAGTGTCATTGACAGTAAGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| CDS-3UTR CAA 90 bp | GTATCCAGAACACAAGTGAGTACCGTATACTTTAAAAGAATGCTTACAGAGCTCTTGGCCTGGCTGCTGTaGTCATCTTTTATGACTGGC | + |
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Preference number: 5 (lower is better) Translates to: VSRTQVSTVYFKRMLTELLAWLL*SSFMTG Trigger: GCCAGTCATAAAAGATGACAACAGCAGCCAGGCCAA...GAGCTCTGTAAGCATTCTTTTAAAGTATACGGTACTCACTTGTGTTCTGGATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| CDS-3UTR CAA 90 bp | AATGACACTCCTCCACACCAACATGTGGTCCAAAATAGAATCCCTCTCATCTTCGTCTGTATTTTATCTTaGTATGAGAGGGTAGGTCTC | + |
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Preference number: 5 (lower is better) Translates to: NDTPPHQHVVQNRIPLIFVCILS*YERVGL Trigger: GAGACCTACCCTCTCATACAAAGATAAAATACAGAC...GAAGATGAGAGGGATTCTATTTTGGACCACATGTTGGTGTGGAGGAGTGTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| CDS-3UTR CAA 90 bp | AATGACACTCCTCCACACCAACATGTGGTCCAAAATAGAATCCCTCTCATCTTCTTATTACAGGCAGATTaGCTTTTCCCAGGAAAACAT | + |
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Preference number: 5 (lower is better) Translates to: NDTPPHQHVVQNRIPLIFLLQAD*LFPGKH Trigger: ATGTTTTCCTGGGAAAAGCAAATCTGCCTGTAATAA...GAAGATGAGAGGGATTCTATTTTGGACCACATGTTGGTGTGGAGGAGTGTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000279839.8 |
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| CDS GCA 72 bp | GCGCCTGACAGGCACTCGGTTCCGCCCCTAGCCCGCTaGTCCAGGGCCTCCACCGCCCGCGCTCTGCACTCT | + |
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Preference number: 6 (lower is better) Translates to: APDRHSVPPLAR*SRASTARALHS Trigger: AGAGTGCAGAGCGCGGGCGGTGGAGGCCCTGGAGCAGCGGGCTAGGGGCGGAACCGAGTGCCTGTCAGGCGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000542165.1 ENST00000542907.5 |
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| CDS TCA 72 bp | GATCTCCTCGGCGGGCCCAAGAGCTCCAGACGCGCCTaGCAGGCACTCGGTTCCGCCCCTAGCCCGCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: DLLGGPKSSRRA*QALGSAPSPLL Trigger: GAGCAGCGGGCTAGGGGCGGAACCGAGTGCCTGTCAGGCGCGTCTGGAGCTCTTGGGCCCGCCGAGGAGATC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000542165.1 ENST00000542907.5 |
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| CDS GCA 72 bp | GGTTCGCTTTACGCAGTAGGCGAGCTGCCTGTACGCTaGGATCTCCTCGGCGGGCCCAAGAGCTCCAGACGC | + |
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Preference number: 6 (lower is better) Translates to: GSLYAVGELPVR*DLLGGPKSSRR Trigger: GCGTCTGGAGCTCTTGGGCCCGCCGAGGAGATCGCAGCGTACAGGCAGCTCGCCTACTGCGTAAAGCGAACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542907.5 |
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| CDS GCA 72 bp | TCATCTTTTATGGCAGTAGGCGAGCTGCCTGTACGCTaGGATCTCCTCGGCGGGCCCAAGAGCTCCAGACGC | + |
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Preference number: 6 (lower is better) Translates to: SSFMAVGELPVR*DLLGGPKSSRR Trigger: GCGTCTGGAGCTCTTGGGCCCGCCGAGGAGATCGCAGCGTACAGGCAGCTCGCCTACTGCCATAAAAGATGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542165.1 |
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| CDS GCA 72 bp | TCCCATCGCGATAAGAAAGATAATCTCCTATCCTCTTaGCGCTCACACTGGCCGAGGTCCGATGCAGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: SHRDKKDNLLSS*RSHWPRSDAAG Trigger: GCCTGCTGCATCGGACCTCGGCCAGTGTGAGCGGCAAGAGGATAGGAGATTATCTTTCTTATCGCGATGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000542165.1 ENST00000542907.5 |
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| CDS CCA 72 bp | TTCCCCTTCCACCTCTGGCAGGTTCAAAGGTTGGCCTaGCTGCTGTTGTCATCTTTTATGACTGGCCGAGGT | + |
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Preference number: 6 (lower is better) Translates to: FPFHLWQVQRLA*LLLSSFMTGRG Trigger: ACCTCGGCCAGTCATAAAAGATGACAACAGCAGCCAGGCCAACCTTTGAACCTGCCAGAGGTGGAAGGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000279839.8 ENST00000539856.5 ENST00000621358.4 |
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| CDS CCA 72 bp | TTCCCCTTCCACCTCTGGCAGGTTCAAAGGTTGGCCTaGCTGCTGTTGTCATCTTTTATGGCAGTAGGCGAG | + |
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Preference number: 6 (lower is better) Translates to: FPFHLWQVQRLA*LLLSSFMAVGE Trigger: CTCGCCTACTGCCATAAAAGATGACAACAGCAGCCAGGCCAACCTTTGAACCTGCCAGAGGTGGAAGGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000542165.1 |
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| CDS CAA 72 bp | CACCTCTGGCAGGTTCAAAGGTTGGCCTGGCTGCTGTaGTCATCTTTTATGGCAGTAGGCGAGCTGCCTGTA | + |
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Preference number: 6 (lower is better) Translates to: HLWQVQRLAWLL*SSFMAVGELPV Trigger: TACAGGCAGCTCGCCTACTGCCATAAAAGATGACAACAGCAGCCAGGCCAACCTTTGAACCTGCCAGAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542165.1 |
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| CDS CCA 72 bp | AAGAAAGATAATCTCCTATCCTCTTGCCGCTCACACTaGCCGAGGTCCGATGCAGCAGGCTCCGAAGATCAT | + |
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Preference number: 6 (lower is better) Translates to: KKDNLLSSCRSH*PRSDAAGSEDH Trigger: ATGATCTTCGGAGCCTGCTGCATCGGACCTCGGCCAGTGTGAGCGGCAAGAGGATAGGAGATTATCTTTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542165.1 |
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| CDS CAA 72 bp | CACCTCTGGCAGGTTCAAAGGTTGGCCTGGCTGCTGTaGTCATCTTTTATGCTGGGGTTCGCTTTACGCAGT | + |
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Preference number: 6 (lower is better) Translates to: HLWQVQRLAWLL*SSFMLGFALRS Trigger: ACTGCGTAAAGCGAACCCCAGCATAAAAGATGACAACAGCAGCCAGGCCAACCTTTGAACCTGCCAGAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000542907.5 |
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| CDS CAA 90 bp | CTGCATCAAGGTTGGCGGCAGGAATCTGGTCTAACCGTGGCTTTTTaGACACTGAAGAGGAGGTTGTATGTTCTCGGGTTGGACGATCCC | + |
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Preference number: 6 (lower is better) Translates to: LHQGWRQESGLTVAF*TLKRRLYVLGLDDP Trigger: GGGATCGTCCAACCCGAGAACATACAACCTCCTCTTCAGTGTCAAAAAAGCCACGGTTAGACCAGATTCCTGCCGCCAACCTTGATGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000279839.8 ENST00000539856.5 ENST00000542907.5 |
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| CDS GCA 72 bp | GGTACCTCGGGTTGGACGATCCCTATTTTTCTCTCTTaGAGCAGCTCTCTCTCTTTCTTCCAACTCTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: GTSGWTIPIFLS*SSSLSFFQLSP Trigger: AGGAGAGAGTTGGAAGAAAGAGAGAGAGCTGCTGCAAGAGAGAAAAATAGGGATCGTCCAACCCGAGGTACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000542165.1 ENST00000621358.4 |
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| CDS CAA 72 bp | TGGTACCTCGGGTTGGACGATCCCTATTTTTCTCTCTaGCAGCAGCTCTCTCTCTTTCTTCCAACTCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: WYLGLDDPYFSL*QQLSLFLPTLS Trigger: GGAGAGAGTTGGAAGAAAGAGAGAGAGCTGCTGCAAGAGAGAAAAATAGGGATCGTCCAACCCGAGGTACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000542165.1 ENST00000621358.4 |
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| CDS GCA 72 bp | ATGTTCTCGGGTTGGACGATCCCTATTTTTCTCTCTTaGAGCAGCTCTCTCTCTTTCTTCCAACTCTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: MFSGWTIPIFLS*SSSLSFFQLSP Trigger: AGGAGAGAGTTGGAAGAAAGAGAGAGAGCTGCTGCAAGAGAGAAAAATAGGGATCGTCCAACCCGAGAACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000279839.8 ENST00000539856.5 ENST00000542907.5 |
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| CDS CCA 72 bp | GAGACAAATGTCTTGGATAGTGTTGGTACCTCGGGTTaGACGATCCCTATTTTTCTCTCTTGCAGCAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: ETNVLDSVGTSG*TIPIFLSCSSS Trigger: AGAGCTGCTGCAAGAGAGAAAAATAGGGATCGTCCAACCCGAGGTACCAACACTATCCAAGACATTTGTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000542165.1 ENST00000621358.4 |
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| CDS CAA 72 bp | TATGTTCTCGGGTTGGACGATCCCTATTTTTCTCTCTaGCAGCAGCTCTCTCTCTTTCTTCCAACTCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: YVLGLDDPYFSL*QQLSLFLPTLS Trigger: GGAGAGAGTTGGAAGAAAGAGAGAGAGCTGCTGCAAGAGAGAAAAATAGGGATCGTCCAACCCGAGAACATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000279839.8 ENST00000539856.5 ENST00000542907.5 |
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| CDS CAA 72 bp | TCTTTCTTCTGGTCATCTACACCTTTTGCACAGTTCTaGAAGACAACGTCATCATCCCACCTTCTTTTAACT | + |
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Preference number: 6 (lower is better) Translates to: SFFWSSTPFAQF*KTTSSSHLLLT Trigger: AGTTAAAAGAAGGTGGGATGATGACGTTGTCTTCAAGAACTGTGCAAAAGGTGTAGATGACCAGAAGAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000279839.8 ENST00000616442.4 ENST00000621358.4 |
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| CDS CAA 90 bp | AACTATCAACAACATAATTTTATGAGACAAATGTCTTGGATAGTGTaGGTACCTCGGGTTGGACGATCCCTATTTTTCTCTCTTGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: NYQQHNFMRQMSWIV*VPRVGRSLFFSLAA Trigger: TGCTGCAAGAGAGAAAAATAGGGATCGTCCAACCCGAGGTACCAACACTATCCAAGACATTTGTCTCATAAAATTATGTTGTTGATAGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000542165.1 ENST00000621358.4 |
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| CDS GCA 72 bp | GTCTGTATTTTATCTTTGTATGAGAGGGTAGGTCTCTaGTTGAATACTGCTTTGAAAGTTGGCTCAAATCAC | + |
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Preference number: 6 (lower is better) Translates to: VCILSLYERVGL*LNTALKVGSNH Trigger: GTGATTTGAGCCAACTTTCAAAGCAGTATTCAAGCAGAGACCTACCCTCTCATACAAAGATAAAATACAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000279839.8 ENST00000539856.5 ENST00000542165.1 ENST00000542907.5 ENST00000621358.4 |
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| CDS CAA 72 bp | CAACATAATTTTATGAGACAAATGTCTTGGATAGTGTaGGTACCTCGGGTTGGACGATCCCTATTTTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: QHNFMRQMSWIV*VPRVGRSLFFS Trigger: AGAGAAAAATAGGGATCGTCCAACCCGAGGTACCAACACTATCCAAGACATTTGTCTCATAAAATTATGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000542165.1 ENST00000621358.4 |
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