RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CUZD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000138161

Ensembl transcript IDs: ENST00000338948.3, ENST00000368899.5, ENST00000368900.5, ENST00000368901.5, ENST00000392790.6

Found 376 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CACAATAAGCCAGCTCAGGATGCGGCTTTGGGTAATTGGGGCTGGTaGAGGATCCTTCCAAGGTATCCAGGTAACCGCCACAGTTTGGAA +
Preference number: 1 (lower is better)
Translates to: HNKPAQDAALGNWGW*RILPRYPGNRHSLE
Trigger: TTCCAAACTGTGGCGGTTACCTGGATACCTTGGAAGGATCCTTCACCAGCCCCAATTACCCAAAGCCGCATCCTGAGCTGGCTTATTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
3UTR CCA 90 bp AGGTGGGAGTCACACGGCCACAGACTTGTCCAATCAGGCCAGAGTTaGTGGAGGGGCCATCATAGATGGCAAGAAAATCAAATTTGCACT +
Preference number: 1 (lower is better)
Translates to: RWESHGHRLVQSGQS*WRGHHRWQENQICT
Trigger: AGTGCAAATTTGATTTTCTTGCCATCTATGATGGCCCCTCCACCAACTCTGGCCTGATTGGACAAGTCTGTGGCCGTGTGACTCCCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368901.5
3UTR CCA 90 bp TGGGAGTCACACGGCCACAGACTTGTCCAATCAGGCCAGAGTTGGTaGAGGGGCCATCATAGATGGCAAGAAAATCAAATTTGCACTGTT +
Preference number: 1 (lower is better)
Translates to: WESHGHRLVQSGQSW*RGHHRWQENQICTV
Trigger: AACAGTGCAAATTTGATTTTCTTGCCATCTATGATGGCCCCTCCACCAACTCTGGCCTGATTGGACAAGTCTGTGGCCGTGTGACTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368901.5
3UTR GCA 90 bp TGCTTCTGGAGACACAACCTTGATTGCAGCGAGACTGGTGGTCACTaGTATCACATATCAAAACTTTACACTGCAGATACACAGAGCTCA +
Preference number: 1 (lower is better)
Translates to: CFWRHNLDCSETGGH*YHISKLYTADTQSS
Trigger: TGAGCTCTGTGTATCTGCAGTGTAAAGTTTTGATATGTGATAGCAGTGACCACCAGTCTCGCTGCAATCAAGGTTGTGTCTCCAGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR GCA 90 bp GCTACAGTCACCACATTCAGAGCTAGAACCATGAAGGAAAACAGATaGACACTGTTGAAAGGCTGGTTTGGAGTTTCTTCCGCATGTGTT +
Preference number: 1 (lower is better)
Translates to: ATVTTFRARTMKENR*TLLKGWFGVSSACV
Trigger: AACACATGCGGAAGAAACTCCAAACCAGCCTTTCAACAGTGTGCATCTGTTTTCCTTCATGGTTCTAGCTCTGAATGTGGTGACTGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR TCA 90 bp GGGAGAGGCTCTACAGGTATCAAGAAACACCACCAAATTTGGATCTaGGGTGTGCAGACTAACTTGAACAAAAAGAGTTTGGTTCAAATC +
Preference number: 1 (lower is better)
Translates to: GRGSTGIKKHHQIWI*GVQTNLNKKSLVQI
Trigger: GATTTGAACCAAACTCTTTTTGTTCAAGTTAGTCTGCACACCTCAGATCCAAATTTGGTGGTGTTTCTTGATACCTGTAGAGCCTCTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR CCA 90 bp TGGAATCTGTTTTCCATTTATATGAAGAAATGTCTCGTTTGCTTCTaGAGACACAACCTTGATTGCAGCGAGACTGGTGGTCACTGCTAT +
Preference number: 1 (lower is better)
Translates to: WNLFSIYMKKCLVCF*RHNLDCSETGGHCY
Trigger: ATAGCAGTGACCACCAGTCTCGCTGCAATCAAGGTTGTGTCTCCAGAAGCAAACGAGACATTTCTTCATATAAATGGAAAACAGATTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR CCA 90 bp AGACTTGTCCAATCAGGCCAGAGTTGGTGGAGGGGCCATCATAGATaGCAAGAAAATCAAATTTGCACTGTTTGTCTATTTCTAGGAAAA +
Preference number: 1 (lower is better)
Translates to: RLVQSGQSWWRGHHR*QENQICTVCLFLGK
Trigger: TTTTCCTAGAAATAGACAAACAGTGCAAATTTGATTTTCTTGCCATCTATGATGGCCCCTCCACCAACTCTGGCCTGATTGGACAAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368901.5
3UTR TCA 90 bp CATTTATATGAAGAAATGTCTCGTTTGCTTCTGGAGACACAACCTTaGTTGCAGCGAGACTGGTGGTCACTGCTATCACATATCAAAACT +
Preference number: 1 (lower is better)
Translates to: HLYEEMSRLLLETQP*LQRDWWSLLSHIKT
Trigger: AGTTTTGATATGTGATAGCAGTGACCACCAGTCTCGCTGCAATCAAGGTTGTGTCTCCAGAAGCAAACGAGACATTTCTTCATATAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR GCA 90 bp TATATGAAGAAATGTCTCGTTTGCTTCTGGAGACACAACCTTGATTaGAGCGAGACTGGTGGTCACTGCTATCACATATCAAAACTTTAC +
Preference number: 1 (lower is better)
Translates to: YMKKCLVCFWRHNLD*SETGGHCYHISKLY
Trigger: GTAAAGTTTTGATATGTGATAGCAGTGACCACCAGTCTCGCTGCAATCAAGGTTGTGTCTCCAGAAGCAAACGAGACATTTCTTCATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR CCA 90 bp ATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTTTGGCATCCTaGAGAAACATGTCTCACTTAGGGTTGGACCTGTTAGTTAATAGT +
Preference number: 1 (lower is better)
Translates to: IHNMCSHEVAFPLAS*RNMSHLGLDLLVNS
Trigger: ACTATTAACTAACAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTCGTGGCTACACATATTATGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR TCA 90 bp GAATTATGTCCCATTTCACACTTCACAATAATCTGGAGTTGTTTCTaGCGGGTGATCACTTCAGAAGTTGAGGATGCAGAAAAGGTGATT +
Preference number: 1 (lower is better)
Translates to: ELCPISHFTIIWSCF*RVITSEVEDAEKVI
Trigger: AATCACCTTTTCTGCATCCTCAACTTCTGAAGTGATCACCCGTCAGAAACAACTCCAGATTATTGTGAAGTGTGAAATGGGACATAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR CCA 90 bp CACGGCCACAGACTTGTCCAATCAGGCCAGAGTTGGTGGAGGGGCCATCATAGACTCAGGATGCGGCTTTaGGTAATTGGGGCTGGTGAA +
Preference number: 2 (lower is better)
Translates to: HGHRLVQSGQSWWRGHHRLRMRL*VIGAGE
Trigger: TTCACCAGCCCCAATTACCCAAAGCCGCATCCTGAG...TCTATGATGGCCCCTCCACCAACTCTGGCCTGATTGGACAAGTCTGTGGCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368901.5
3UTR-3UTR GCA 90 bp GGTCGTAGGTTGGAGATGCAAAGTCAGAGGTGGGAGAGGCTCTACAGGTATCAAGCTGAAATCCTGAATTaGCACTTGCACTTCGATCCC +
Preference number: 2 (lower is better)
Translates to: GRRLEMQSQRWERLYRYQAEILN*HLHFDP
Trigger: GGGATCGAAGTGCAAGTGGCAATTCAGGATTTCAGC...TTGATACCTGTAGAGCCTCTCCCACCTCTGACTTTGCATCTCCAACCTACGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR CCA 90 bp TGCTTCTGGAGACACAACCTTGATTGCAGCGAGACTGGTGGTCACTGCTATCACATGCAAAGTCAGAGGTaGGAGAGGCTCTACAGGTAT +
Preference number: 2 (lower is better)
Translates to: CFWRHNLDCSETGGHCYHMQSQR*ERLYRY
Trigger: ATACCTGTAGAGCCTCTCCCACCTCTGACTTTGCAT...GTGATAGCAGTGACCACCAGTCTCGCTGCAATCAAGGTTGTGTCTCCAGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR TCA 90 bp TTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGTTAGTTCTGGAGACACAACCTTaGTTGCAGCGAGACTGGTGG +
Preference number: 2 (lower is better)
Translates to: FPLASWRNMSHLGLDLLVLETQP*LQRDWW
Trigger: CCACCAGTCTCGCTGCAATCAAGGTTGTGTCTCCAG...AACTAACAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR CCA 90 bp GGTCGTAGGTTGGAGATGCAAAGTCAGAGGTGGGAGAGGCTCTACAGGTATCAATGTCTCGTTTGCTTCTaGAGACACAACCTTGATTGC +
Preference number: 2 (lower is better)
Translates to: GRRLEMQSQRWERLYRYQCLVCF*RHNLDC
Trigger: GCAATCAAGGTTGTGTCTCCAGAAGCAAACGAGACA...TTGATACCTGTAGAGCCTCTCCCACCTCTGACTTTGCATCTCCAACCTACGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR TCA 90 bp CACGAGGTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGCAAAATGCCTCACTGTaGTTGTCGCTACAGTCACCA +
Preference number: 2 (lower is better)
Translates to: HEVAFPLASWRNMSHLGLQNASL*LSLQSP
Trigger: TGGTGACTGTAGCGACAATCACAGTGAGGCATTTTG...CAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR TCA 90 bp AAATGCCTCACTGTGATTGTCGCTACAGTCACCACATTCAGAGCTAGAACCATGGGTAATTGGGGCTGGTaGAGGATCCTTCCAAGGTAT +
Preference number: 2 (lower is better)
Translates to: KCLTVIVATVTTFRARTMGNWGW*RILPRY
Trigger: ATACCTTGGAAGGATCCTTCACCAGCCCCAATTACC...CATGGTTCTAGCTCTGAATGTGGTGACTGTAGCGACAATCACAGTGAGGCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR GCA 90 bp AAATGCCTCACTGTGATTGTCGCTACAGTCACCACATTCAGAGCTAGAACCATGGTCGTAGGTTGGAGATaGAAAGTCAGAGGTGGGAGA +
Preference number: 2 (lower is better)
Translates to: KCLTVIVATVTTFRARTMVVGWR*KVRGGR
Trigger: TCTCCCACCTCTGACTTTGCATCTCCAACCTACGAC...CATGGTTCTAGCTCTGAATGTGGTGACTGTAGCGACAATCACAGTGAGGCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR GCA 90 bp GCTACAGTCACCACATTCAGAGCTAGAACCATGAAGGAAAACAGATGCACACTGAGACACAACCTTGATTaGAGCGAGACTGGTGGTCAC +
Preference number: 2 (lower is better)
Translates to: ATVTTFRARTMKENRCTLRHNLD*SETGGH
Trigger: GTGACCACCAGTCTCGCTGCAATCAAGGTTGTGTCT...CAGTGTGCATCTGTTTTCCTTCATGGTTCTAGCTCTGAATGTGGTGACTGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR CCA 90 bp CACGAGGTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGTTGCAGCGAGACTGGTaGTCACTGCTATCACATATC +
Preference number: 2 (lower is better)
Translates to: HEVAFPLASWRNMSHLGLLQRDW*SLLSHI
Trigger: GATATGTGATAGCAGTGACCACCAGTCTCGCTGCAA...CAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR CCA 90 bp ACCATGAAGGAAAACAGATGCACACTGTTGAAAGGCTGGTTTGGAGTTTCTTCCCTCAGGATGCGGCTTTaGGTAATTGGGGCTGGTGAA +
Preference number: 2 (lower is better)
Translates to: TMKENRCTLLKGWFGVSSLRMRL*VIGAGE
Trigger: TTCACCAGCCCCAATTACCCAAAGCCGCATCCTGAG...GGAAGAAACTCCAAACCAGCCTTTCAACAGTGTGCATCTGTTTTCCTTCATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR CCA 90 bp CTACAGGTATCAAGAAACACCACCAAATTTGGATCTGAGGTGTGCAGACTAACTTCAGGCCAGAGTTGGTaGAGGGGCCATCATAGATGG +
Preference number: 2 (lower is better)
Translates to: LQVSRNTTKFGSEVCRLTSGQSW*RGHHRW
Trigger: CCATCTATGATGGCCCCTCCACCAACTCTGGCCTGA...AGTTAGTCTGCACACCTCAGATCCAAATTTGGTGGTGTTTCTTGATACCTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368901.5
3UTR-3UTR TCA 90 bp ATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGTTAGTGGTAATTGGGGCTGGTaGAGGATCCTTCCAAGGTAT +
Preference number: 2 (lower is better)
Translates to: ISFGILEKHVSLRVGPVSGNWGW*RILPRY
Trigger: ATACCTTGGAAGGATCCTTCACCAGCCCCAATTACC...ACTAACAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR GCA 90 bp ATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGTTAGTGTCGTAGGTTGGAGATaGAAAGTCAGAGGTGGGAGA +
Preference number: 2 (lower is better)
Translates to: ISFGILEKHVSLRVGPVSVVGWR*KVRGGR
Trigger: TCTCCCACCTCTGACTTTGCATCTCCAACCTACGAC...ACTAACAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR CCA 90 bp GTCCAATCAGGCCAGAGTTGGTGGAGGGGCCATCATAGATGGCAAGAAAATCAAGTAACCGCCACAGTTTaGAATAGAGATGTTAGGAGA +
Preference number: 2 (lower is better)
Translates to: VQSGQSWWRGHHRWQENQVTATV*NRDVRR
Trigger: TCTCCTAACATCTCTATTCCAAACTGTGGCGGTTAC...TTGATTTTCTTGCCATCTATGATGGCCCCTCCACCAACTCTGGCCTGATTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368901.5
3UTR-3UTR CCA 90 bp CTACAGGTATCAAGAAACACCACCAAATTTGGATCTGAGGTGTGCAGACTAACTATGACGATTCGAAGGTaGGAGTCACACGGCCACAGA +
Preference number: 2 (lower is better)
Translates to: LQVSRNTTKFGSEVCRLTMTIRR*ESHGHR
Trigger: TCTGTGGCCGTGTGACTCCCACCTTCGAATCGTCAT...AGTTAGTCTGCACACCTCAGATCCAAATTTGGTGGTGTTTCTTGATACCTGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368901.5
3UTR-3UTR TCA 90 bp GCTACAGTCACCACATTCAGAGCTAGAACCATGAAGGAAAACAGATGCACACTGTCAGAGCTAGAACCATaGAGGAAAACAGATGCACAC +
Preference number: 2 (lower is better)
Translates to: ATVTTFRARTMKENRCTLSELEP*RKTDAH
Trigger: GTGTGCATCTGTTTTCCTTCATGGTTCTAGCTCTGA...CAGTGTGCATCTGTTTTCCTTCATGGTTCTAGCTCTGAATGTGGTGACTGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR TCA 90 bp CCACTTGCACTTCGATCCCTTTTCAGACGAATGGGTCCTATGATGGAATCTGTTATCTGGAGTTGTTTCTaGCGGGTGATCACTTCAGAA +
Preference number: 2 (lower is better)
Translates to: PLALRSLFRRMGPMMESVIWSCF*RVITSE
Trigger: TTCTGAAGTGATCACCCGTCAGAAACAACTCCAGAT...AACAGATTCCATCATAGGACCCATTCGTCTGAAAAGGGATCGAAGTGCAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR GCA 90 bp CCGTTGATTTACAAAATGCCTCACTGTGATTGTCGCTACAGTCACCACATTCAGGCTGAAATCCTGAATTaGCACTTGCACTTCGATCCC +
Preference number: 2 (lower is better)
Translates to: PLIYKMPHCDCRYSHHIQAEILN*HLHFDP
Trigger: GGGATCGAAGTGCAAGTGGCAATTCAGGATTTCAGC...CTGAATGTGGTGACTGTAGCGACAATCACAGTGAGGCATTTTGTAAATCAACGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR GCA 90 bp GGTCGTAGGTTGGAGATGCAAAGTCAGAGGTGGGAGAGGCTCTACAGGTATCAACTGGTATTTGTAGTCTaGCCGTTGATTTACAAAATG +
Preference number: 2 (lower is better)
Translates to: GRRLEMQSQRWERLYRYQLVFVV*PLIYKM
Trigger: CATTTTGTAAATCAACGGGCAGACTACAAATACCAG...TTGATACCTGTAGAGCCTCTCCCACCTCTGACTTTGCATCTCCAACCTACGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR CCA 90 bp ATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGTTAGTATGCAAAGTCAGAGGTaGGAGAGGCTCTACAGGTAT +
Preference number: 2 (lower is better)
Translates to: ISFGILEKHVSLRVGPVSMQSQR*ERLYRY
Trigger: ATACCTGTAGAGCCTCTCCCACCTCTGACTTTGCAT...ACTAACAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR CCA 90 bp TGGAGATGCAAAGTCAGAGGTGGGAGAGGCTCTACAGGTATCAAGAAACACCACTTTCCTTTGGCATCCTaGAGAAACATGTCTCACTTA +
Preference number: 2 (lower is better)
Translates to: WRCKVRGGRGSTGIKKHHFPLAS*RNMSHL
Trigger: TAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAA...GTGGTGTTTCTTGATACCTGTAGAGCCTCTCCCACCTCTGACTTTGCATCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR TCA 90 bp ACCATGAAGGAAAACAGATGCACACTGTTGAAAGGCTGGTTTGGAGTTTCTTCCCACCAAATTTGGATCTaGGGTGTGCAGACTAACTTG +
Preference number: 2 (lower is better)
Translates to: TMKENRCTLLKGWFGVSSHQIWI*GVQTNL
Trigger: CAAGTTAGTCTGCACACCTCAGATCCAAATTTGGTG...GGAAGAAACTCCAAACCAGCCTTTCAACAGTGTGCATCTGTTTTCCTTCATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR TCA 90 bp TTGCAGCGAGACTGGTGGTCACTGCTATCACATATCAAAACTTTACACTGCAGACACCAAATTTGGATCTaGGGTGTGCAGACTAACTTG +
Preference number: 2 (lower is better)
Translates to: LQRDWWSLLSHIKTLHCRHQIWI*GVQTNL
Trigger: CAAGTTAGTCTGCACACCTCAGATCCAAATTTGGTG...TCTGCAGTGTAAAGTTTTGATATGTGATAGCAGTGACCACCAGTCTCGCTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR TCA 90 bp AACCATGAAGGAAAACAGATGCACACTGTTGAAAGGCTGGTTTGGAGTTTCTTCCAAAATGCCTCACTGTaGTTGTCGCTACAGTCACCA +
Preference number: 2 (lower is better)
Translates to: NHEGKQMHTVERLVWSFFQNASL*LSLQSP
Trigger: TGGTGACTGTAGCGACAATCACAGTGAGGCATTTTG...GAAGAAACTCCAAACCAGCCTTTCAACAGTGTGCATCTGTTTTCCTTCATGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR TCA 90 bp GTTTGCTTCTGGAGACACAACCTTGATTGCAGCGAGACTGGTGGTCACTGCTATGAGTCAGTAACTATTTaGAACGTCAATGTACTGGAT +
Preference number: 2 (lower is better)
Translates to: VCFWRHNLDCSETGGHCYESVTI*NVNVLD
Trigger: ATCCAGTACATTGACGTTTCAAATAGTTACTGACTC...ATAGCAGTGACCACCAGTCTCGCTGCAATCAAGGTTGTGTCTCCAGAAGCAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR GCA 90 bp CACGAGGTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGAAGAAATGTCTCGTTTaGTTCTGGAGACACAACCTT +
Preference number: 2 (lower is better)
Translates to: HEVAFPLASWRNMSHLGLKKCLV*FWRHNL
Trigger: AAGGTTGTGTCTCCAGAAGCAAACGAGACATTTCTT...CAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTCGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR CCA 90 bp TTTCATGCTGAAATCCTGAATTGCCACTTGCACTTCGATCCCTTTTCAGACGAAATGCAAAGTCAGAGGTaGGAGAGGCTCTACAGGTAT +
Preference number: 2 (lower is better)
Translates to: FHAEILNCHLHFDPFSDEMQSQR*ERLYRY
Trigger: ATACCTGTAGAGCCTCTCCCACCTCTGACTTTGCAT...TTCGTCTGAAAAGGGATCGAAGTGCAAGTGGCAATTCAGGATTTCAGCATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR CCA 90 bp ACAACCTTGATTGCAGCGAGACTGGTGGTCACTGCTATCACATATCAAAACTTTTTGCAGCGAGACTGGTaGTCACTGCTATCACATATC +
Preference number: 2 (lower is better)
Translates to: TTLIAARLVVTAITYQNFLQRDW*SLLSHI
Trigger: GATATGTGATAGCAGTGACCACCAGTCTCGCTGCAA...AAAGTTTTGATATGTGATAGCAGTGACCACCAGTCTCGCTGCAATCAAGGTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR CCA 90 bp CTGCAGCTTCTGGTATTTGTAGTCTGCCCGTTGATTTACAAAATGCCTCACTGTACACTGTTGAAAGGCTaGTTTGGAGTTTCTTCCGCA +
Preference number: 2 (lower is better)
Translates to: LQLLVFVVCPLIYKMPHCTLLKG*FGVSSA
Trigger: TGCGGAAGAAACTCCAAACCAGCCTTTCAACAGTGT...ACAGTGAGGCATTTTGTAAATCAACGGGCAGACTACAAATACCAGAAGCTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR TCA 90 bp AACCATGAAGGAAAACAGATGCACACTGTTGAAAGGCTGGTTTGGAGTTTCTTCCACCAAATTTGGATCTaGGGTGTGCAGACTAACTTG +
Preference number: 2 (lower is better)
Translates to: NHEGKQMHTVERLVWSFFHQIWI*GVQTNL
Trigger: CAAGTTAGTCTGCACACCTCAGATCCAAATTTGGTG...GAAGAAACTCCAAACCAGCCTTTCAACAGTGTGCATCTGTTTTCCTTCATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR TCA 90 bp AAGGCTGGTTTGGAGTTTCTTCCGCATGTGTTTCATGCTGAAATCCTGAATTGCGACGAATGGGTCCTATaGTGGAATCTGTTTTCCATT +
Preference number: 2 (lower is better)
Translates to: KAGLEFLPHVFHAEILNCDEWVL*WNLFSI
Trigger: AATGGAAAACAGATTCCATCATAGGACCCATTCGTC...GCAATTCAGGATTTCAGCATGAAACACATGCGGAAGAAACTCCAAACCAGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR TCA 90 bp ACAACCTTGATTGCAGCGAGACTGGTGGTCACTGCTATCACATATCAAAACTTTTTCATGCTGAAATCCTaGATTGCCACTTGCACTTCG +
Preference number: 2 (lower is better)
Translates to: TTLIAARLVVTAITYQNFFMLKS*IATCTS
Trigger: CGAAGTGCAAGTGGCAATTCAGGATTTCAGCATGAA...AAAGTTTTGATATGTGATAGCAGTGACCACCAGTCTCGCTGCAATCAAGGTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR TCA 90 bp GACTGGTGGTCACTGCTATCACATATCAAAACTTTACACTGCAGATACACAGAGTTCATGCTGAAATCCTaGATTGCCACTTGCACTTCG +
Preference number: 2 (lower is better)
Translates to: DWWSLLSHIKTLHCRYTEFMLKS*IATCTS
Trigger: CGAAGTGCAAGTGGCAATTCAGGATTTCAGCATGAA...CTCTGTGTATCTGCAGTGTAAAGTTTTGATATGTGATAGCAGTGACCACCAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR TCA 90 bp ATTGTCGCTACAGTCACCACATTCAGAGCTAGAACCATGAAGGAAAACAGATGCGCATGTGTTTCATGCTaGAATCCTGAATTGCCACTT +
Preference number: 2 (lower is better)
Translates to: IVATVTTFRARTMKENRCACVSC*NPELPL
Trigger: AAGTGGCAATTCAGGATTTCAGCATGAAACACATGC...GCATCTGTTTTCCTTCATGGTTCTAGCTCTGAATGTGGTGACTGTAGCGACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR TCA 90 bp TTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGTTAGTTGCATGTGTTTCATGCTaGAATCCTGAATTGCCACTT +
Preference number: 2 (lower is better)
Translates to: FPLASWRNMSHLGLDLLVACVSC*NPELPL
Trigger: AAGTGGCAATTCAGGATTTCAGCATGAAACACATGC...AACTAACAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR TCA 90 bp AGCGAGACTGGTGGTCACTGCTATCACATATCAAAACTTTACACTGCAGATACATCAGAGCTAGAACCATaGAGGAAAACAGATGCACAC +
Preference number: 2 (lower is better)
Translates to: SETGGHCYHISKLYTADTSELEP*RKTDAH
Trigger: GTGTGCATCTGTTTTCCTTCATGGTTCTAGCTCTGA...TGTATCTGCAGTGTAAAGTTTTGATATGTGATAGCAGTGACCACCAGTCTCGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR TCA 90 bp TTTATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTTTGGCATCCTGGAGAGTTGTTTCTGACGGGTaGTCACTTCAGAAGTTGAGG +
Preference number: 2 (lower is better)
Translates to: FIHNMCSHEVAFPLASWRVVSDG*SLQKLR
Trigger: CCTCAACTTCTGAAGTGATCACCCGTCAGAAACAAC...TCTCCAGGATGCCAAAGGAAATGCTACCTCGTGGCTACACATATTATGAATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR TCA 90 bp GGCCCTTCCTCATTTATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTTTGATCTGGAGTTGTTTCTaGCGGGTGATCACTTCAGAA +
Preference number: 2 (lower is better)
Translates to: GPSSFIHNMCSHEVAFPLIWSCF*RVITSE
Trigger: TTCTGAAGTGATCACCCGTCAGAAACAACTCCAGAT...CAAAGGAAATGCTACCTCGTGGCTACACATATTATGAATAAATGAGGAAGGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR GCA 90 bp CTCACTGTGATTGTCGCTACAGTCACCACATTCAGAGCTAGAACCATGAAGGAAGAGACTGGTGGTCACTaGTATCACATATCAAAACTT +
Preference number: 2 (lower is better)
Translates to: LTVIVATVTTFRARTMKEETGGH*YHISKL
Trigger: AAGTTTTGATATGTGATAGCAGTGACCACCAGTCTC...TTCCTTCATGGTTCTAGCTCTGAATGTGGTGACTGTAGCGACAATCACAGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR CCA 90 bp TCAGGCCCTTCCTCATTTATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTACACTGTTGAAAGGCTaGTTTGGAGTTTCTTCCGCA +
Preference number: 2 (lower is better)
Translates to: SGPSSFIHNMCSHEVAFPTLLKG*FGVSSA
Trigger: TGCGGAAGAAACTCCAAACCAGCCTTTCAACAGTGT...AGGAAATGCTACCTCGTGGCTACACATATTATGAATAAATGAGGAAGGGCCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR CCA 90 bp CTGCAGCTTCTGGTATTTGTAGTCTGCCCGTTGATTTACAAAATGCCTCACTGTGTAACCGCCACAGTTTaGAATAGAGATGTTAGGAGA +
Preference number: 2 (lower is better)
Translates to: LQLLVFVVCPLIYKMPHCVTATV*NRDVRR
Trigger: TCTCCTAACATCTCTATTCCAAACTGTGGCGGTTAC...ACAGTGAGGCATTTTGTAAATCAACGGGCAGACTACAAATACCAGAAGCTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR TCA 90 bp TTTATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTTTGGCATCCTGGAGATTCATGCTGAAATCCTaGATTGCCACTTGCACTTCG +
Preference number: 2 (lower is better)
Translates to: FIHNMCSHEVAFPLASWRFMLKS*IATCTS
Trigger: CGAAGTGCAAGTGGCAATTCAGGATTTCAGCATGAA...TCTCCAGGATGCCAAAGGAAATGCTACCTCGTGGCTACACATATTATGAATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR TCA 90 bp CTACAGGTATCAAGAAACACCACCAAATTTGGATCTGAGGTGTGCAGACTAACTGATCACTTCAGAAGTTaGGGATGCAGAAAAGGTGAT +
Preference number: 2 (lower is better)
Translates to: LQVSRNTTKFGSEVCRLTDHFRS*GCRKGD
Trigger: ATCACCTTTTCTGCATCCTCAACTTCTGAAGTGATC...AGTTAGTCTGCACACCTCAGATCCAAATTTGGTGGTGTTTCTTGATACCTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR GCA 90 bp CTCACTGTGATTGTCGCTACAGTCACCACATTCAGAGCTAGAACCATGAAGGAATGCTGGTGTTATATTTaGCCAGTGCATTTTGACTTT +
Preference number: 2 (lower is better)
Translates to: LTVIVATVTTFRARTMKECWCYI*PVHFDF
Trigger: AAAGTCAAAATGCACTGGGCAAATATAACACCAGCA...TTCCTTCATGGTTCTAGCTCTGAATGTGGTGACTGTAGCGACAATCACAGTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR GCA 90 bp CCACTTGCACTTCGATCCCTTTTCAGACGAATGGGTCCTATGATGGAATCTGTTATTCAAAAAGAGCCATaGTGGTGTTATATTTGCCCA +
Preference number: 2 (lower is better)
Translates to: PLALRSLFRRMGPMMESVIQKEP*WCYICP
Trigger: TGGGCAAATATAACACCAGCATGGCTCTTTTTGAAT...AACAGATTCCATCATAGGACCCATTCGTCTGAAAAGGGATCGAAGTGCAAGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR GCA 90 bp CTGGTATTTGTAGTCTGCCCGTTGATTTACAAAATGCCTCACTGTGATTGTCGCGAGACTGGTGGTCACTaGTATCACATATCAAAACTT +
Preference number: 2 (lower is better)
Translates to: LVFVVCPLIYKMPHCDCRETGGH*YHISKL
Trigger: AAGTTTTGATATGTGATAGCAGTGACCACCAGTCTC...GCGACAATCACAGTGAGGCATTTTGTAAATCAACGGGCAGACTACAAATACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR GCA 90 bp GGCCCTTCCTCATTTATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTTTGATGAAGGAAAACAGATaGACACTGTTGAAAGGCTGG +
Preference number: 2 (lower is better)
Translates to: GPSSFIHNMCSHEVAFPLMKENR*TLLKGW
Trigger: CCAGCCTTTCAACAGTGTGCATCTGTTTTCCTTCAT...CAAAGGAAATGCTACCTCGTGGCTACACATATTATGAATAAATGAGGAAGGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR GCA 90 bp CCACTTGCACTTCGATCCCTTTTCAGACGAATGGGTCCTATGATGGAATCTGTTCTGGTATTTGTAGTCTaGCCGTTGATTTACAAAATG +
Preference number: 2 (lower is better)
Translates to: PLALRSLFRRMGPMMESVLVFVV*PLIYKM
Trigger: CATTTTGTAAATCAACGGGCAGACTACAAATACCAG...AACAGATTCCATCATAGGACCCATTCGTCTGAAAAGGGATCGAAGTGCAAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR TCA 90 bp AACCATGAAGGAAAACAGATGCACACTGTTGAAAGGCTGGTTTGGAGTTTCTTCGTGTGCAGACTAACTTaGACAAAAAGAGTTTGGTTC +
Preference number: 2 (lower is better)
Translates to: NHEGKQMHTVERLVWSFFVCRLT*TKRVWF
Trigger: GAACCAAACTCTTTTTGTTCAAGTTAGTCTGCACAC...GAAGAAACTCCAAACCAGCCTTTCAACAGTGTGCATCTGTTTTCCTTCATGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR TCA 90 bp ACTGCTATCACATATCAAAACTTTACACTGCAGATACACAGAGCTCATACTTCTGACTACATCCACTCTTaGTTAGGTCGTAGGTTGGAG +
Preference number: 2 (lower is better)
Translates to: TAITYQNFTLQIHRAHTSDYIHS*LGRRLE
Trigger: CTCCAACCTACGACCTAATCAAGAGTGGATGTAGTC...AGAAGTATGAGCTCTGTGTATCTGCAGTGTAAAGTTTTGATATGTGATAGCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR GCA 90 bp CCACTTGCACTTCGATCCCTTTTCAGACGAATGGGTCCTATGATGGAATCTGTTATCAAAACTTTACACTaGAGATACACAGAGCTCATA +
Preference number: 2 (lower is better)
Translates to: PLALRSLFRRMGPMMESVIKTLH*RYTELI
Trigger: TATGAGCTCTGTGTATCTGCAGTGTAAAGTTTTGAT...AACAGATTCCATCATAGGACCCATTCGTCTGAAAAGGGATCGAAGTGCAAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR GCA 90 bp AAGGCTGGTTTGGAGTTTCTTCCGCATGTGTTTCATGCTGAAATCCTGAATTGCGTTGGGTCTTTTAGTTaGAAGTTATTCCCATTAGAG +
Preference number: 2 (lower is better)
Translates to: KAGLEFLPHVFHAEILNCVGSFS*KLFPLE
Trigger: CTCTAATGGGAATAACTTGCAACTAAAAGACCCAAC...GCAATTCAGGATTTCAGCATGAAACACATGCGGAAGAAACTCCAAACCAGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR CCA 90 bp CGATCCCTTTTCAGACGAATGGGTCCTATGATGGAATCTGTTTTCCATTTATATGTTGAAAGGCTGGTTTaGAGTTTCTTCCGCATGTGT +
Preference number: 2 (lower is better)
Translates to: RSLFRRMGPMMESVFHLYVERLV*SFFRMC
Trigger: ACACATGCGGAAGAAACTCCAAACCAGCCTTTCAAC...ATATAAATGGAAAACAGATTCCATCATAGGACCCATTCGTCTGAAAAGGGATCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR CCA 90 bp GCTACAGTCACCACATTCAGAGCTAGAACCATGAAGGAAAACAGATGCACACTGATCCCCGGTAAGAATTaGCATAATAAAATCTCTTTG +
Preference number: 2 (lower is better)
Translates to: ATVTTFRARTMKENRCTLIPGKN*HNKISL
Trigger: CAAAGAGATTTTATTATGCCAATTCTTACCGGGGAT...CAGTGTGCATCTGTTTTCCTTCATGGTTCTAGCTCTGAATGTGGTGACTGTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368900.5
3UTR-3UTR TCA 90 bp ACTGCTATCACATATCAAAACTTTACACTGCAGATACACAGAGCTCATACTTCTTCAGAGCTAGAACCATaGAGGAAAACAGATGCACAC +
Preference number: 2 (lower is better)
Translates to: TAITYQNFTLQIHRAHTSSELEP*RKTDAH
Trigger: GTGTGCATCTGTTTTCCTTCATGGTTCTAGCTCTGA...AGAAGTATGAGCTCTGTGTATCTGCAGTGTAAAGTTTTGATATGTGATAGCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR GCA 90 bp ACAACCTTGATTGCAGCGAGACTGGTGGTCACTGCTATCACATATCAAAACTTTTGCTGGTGTTATATTTaGCCAGTGCATTTTGACTTT +
Preference number: 2 (lower is better)
Translates to: TTLIAARLVVTAITYQNFCWCYI*PVHFDF
Trigger: AAAGTCAAAATGCACTGGGCAAATATAACACCAGCA...AAAGTTTTGATATGTGATAGCAGTGACCACCAGTCTCGCTGCAATCAAGGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR GCA 90 bp GCTAGAACCATGAAGGAAAACAGATGCACACTGTTGAAAGGCTGGTTTGGAGTTATCAAAACTTTACACTaGAGATACACAGAGCTCATA +
Preference number: 2 (lower is better)
Translates to: ARTMKENRCTLLKGWFGVIKTLH*RYTELI
Trigger: TATGAGCTCTGTGTATCTGCAGTGTAAAGTTTTGAT...AACTCCAAACCAGCCTTTCAACAGTGTGCATCTGTTTTCCTTCATGGTTCTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR GCA 90 bp AGCGAGACTGGTGGTCACTGCTATCACATATCAAAACTTTACACTGCAGATACACTGGTATTTGTAGTCTaGCCGTTGATTTACAAAATG +
Preference number: 2 (lower is better)
Translates to: SETGGHCYHISKLYTADTLVFVV*PLIYKM
Trigger: CATTTTGTAAATCAACGGGCAGACTACAAATACCAG...TGTATCTGCAGTGTAAAGTTTTGATATGTGATAGCAGTGACCACCAGTCTCGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR CCA 90 bp TTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGTTAGTTGAAACGTCAATGTACTaGATGATGATTCAAATACAG +
Preference number: 2 (lower is better)
Translates to: FPLASWRNMSHLGLDLLVETSMY*MMIQIQ
Trigger: CTGTATTTGAATCATCATCCAGTACATTGACGTTTC...AACTAACAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR CCA 90 bp CTGCAGCTTCTGGTATTTGTAGTCTGCCCGTTGATTTACAAAATGCCTCACTGTGAAACGTCAATGTACTaGATGATGATTCAAATACAG +
Preference number: 2 (lower is better)
Translates to: LQLLVFVVCPLIYKMPHCETSMY*MMIQIQ
Trigger: CTGTATTTGAATCATCATCCAGTACATTGACGTTTC...ACAGTGAGGCATTTTGTAAATCAACGGGCAGACTACAAATACCAGAAGCTGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR CCA 90 bp CGATCCCTTTTCAGACGAATGGGTCCTATGATGGAATCTGTTTTCCATTTATATTTTCCTTTGGCATCCTaGAGAAACATGTCTCACTTA +
Preference number: 2 (lower is better)
Translates to: RSLFRRMGPMMESVFHLYFPLAS*RNMSHL
Trigger: TAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAA...ATATAAATGGAAAACAGATTCCATCATAGGACCCATTCGTCTGAAAAGGGATCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR TCA 90 bp TTTTCAAATGAATTGGATTCAAAAAGAGCCATGCTGGTGTTATATTTGCCCAGTGCATGTGTTTCATGCTaGAATCCTGAATTGCCACTT +
Preference number: 2 (lower is better)
Translates to: FSNELDSKRAMLVLYLPSACVSC*NPELPL
Trigger: AAGTGGCAATTCAGGATTTCAGCATGAAACACATGC...ACTGGGCAAATATAACACCAGCATGGCTCTTTTTGAATCCAATTCATTTGAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR GCA 90 bp TTTTCAAATGAATTGGATTCAAAAAGAGCCATGCTGGTGTTATATTTGCCCAGTATGAAGGAAAACAGATaGACACTGTTGAAAGGCTGG +
Preference number: 2 (lower is better)
Translates to: FSNELDSKRAMLVLYLPSMKENR*TLLKGW
Trigger: CCAGCCTTTCAACAGTGTGCATCTGTTTTCCTTCAT...ACTGGGCAAATATAACACCAGCATGGCTCTTTTTGAATCCAATTCATTTGAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR TCA 72 bp CCAGCTCAGGATGCGGCTTTGGGTAATTGGGGCTGGTaGAGGATCCTTCCAAGGTATCCAGGTAACCGCCAC +
Preference number: 3 (lower is better)
Translates to: PAQDAALGNWGW*RILPRYPGNRH
Trigger: GTGGCGGTTACCTGGATACCTTGGAAGGATCCTTCACCAGCCCCAATTACCCAAAGCCGCATCCTGAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
3UTR CCA 72 bp GTGCCACACACAATAAGCCAGCTCAGGATGCGGCTTTaGGTAATTGGGGCTGGTGAAGGATCCTTCCAAGGT +
Preference number: 3 (lower is better)
Translates to: VPHTISQLRMRL*VIGAGEGSFQG
Trigger: ACCTTGGAAGGATCCTTCACCAGCCCCAATTACCCAAAGCCGCATCCTGAGCTGGCTTATTGTGTGTGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
3UTR CCA 72 bp TCACACGGCCACAGACTTGTCCAATCAGGCCAGAGTTaGTGGAGGGGCCATCATAGATGGCAAGAAAATCAA +
Preference number: 3 (lower is better)
Translates to: SHGHRLVQSGQS*WRGHHRWQENQ
Trigger: TTGATTTTCTTGCCATCTATGATGGCCCCTCCACCAACTCTGGCCTGATTGGACAAGTCTGTGGCCGTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368901.5
3UTR-3UTR CAA 90 bp GTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGTCTGGAGACACAACCTaGATTGCAGCGAGACTGGTG +
Preference number: 3 (lower is better)
Translates to: VAFPLASWRNMSHLGLDLSGDTT*IAARLV
Trigger: CACCAGTCTCGCTGCAATCAAGGTTGTGTCTCCAGA...CAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR CAA 90 bp GGTCGTAGGTTGGAGATGCAAAGTCAGAGGTGGGAGAGGCTCTACAGGTATCAAGAAGAAATGTCTCGTTaGCTTCTGGAGACACAACCT +
Preference number: 3 (lower is better)
Translates to: GRRLEMQSQRWERLYRYQEEMSR*LLETQP
Trigger: AGGTTGTGTCTCCAGAAGCAAACGAGACATTTCTTC...TTGATACCTGTAGAGCCTCTCCCACCTCTGACTTTGCATCTCCAACCTACGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR CAA 90 bp GGTCGTAGGTTGGAGATGCAAAGTCAGAGGTGGGAGAGGCTCTACAGGTATCAAAACAGATGCACACTGTaGAAAGGCTGGTTTGGAGTT +
Preference number: 3 (lower is better)
Translates to: GRRLEMQSQRWERLYRYQNRCTL*KGWFGV
Trigger: AACTCCAAACCAGCCTTTCAACAGTGTGCATCTGTT...TTGATACCTGTAGAGCCTCTCCCACCTCTGACTTTGCATCTCCAACCTACGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR CAA 90 bp CATAATATGTGTAGCCACGAGGTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTGGAGACACAACCTaGATTGCAGCGAGACTGGTG +
Preference number: 3 (lower is better)
Translates to: HNMCSHEVAFPLASWRNMSGDTT*IAARLV
Trigger: CACCAGTCTCGCTGCAATCAAGGTTGTGTCTCCAGA...CATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTCGTGGCTACACATATTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR CAA 90 bp TCTGGAGACACAACCTTGATTGCAGCGAGACTGGTGGTCACTGCTATCACATATGAGGTAGCATTTCCTTaGGCATCCTGGAGAAACATG +
Preference number: 3 (lower is better)
Translates to: SGDTTLIAARLVVTAITYEVAFP*ASWRNM
Trigger: CATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTC...ATATGTGATAGCAGTGACCACCAGTCTCGCTGCAATCAAGGTTGTGTCTCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR CAA 90 bp GGCCCTTCCTCATTTATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTTTGCACACGGCCACAGACTaGTCCAATCAGGCCAGAGTT +
Preference number: 3 (lower is better)
Translates to: GPSSFIHNMCSHEVAFPLHTATD*SNQARV
Trigger: AACTCTGGCCTGATTGGACAAGTCTGTGGCCGTGTG...CAAAGGAAATGCTACCTCGTGGCTACACATATTATGAATAAATGAGGAAGGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368901.5
3UTR-3UTR CAA 90 bp TCTGGAGACACAACCTTGATTGCAGCGAGACTGGTGGTCACTGCTATCACATATCACAATAATCTGGAGTaGTTTCTGACGGGTGATCAC +
Preference number: 3 (lower is better)
Translates to: SGDTTLIAARLVVTAITYHNNLE*FLTGDH
Trigger: GTGATCACCCGTCAGAAACAACTCCAGATTATTGTG...ATATGTGATAGCAGTGACCACCAGTCTCGCTGCAATCAAGGTTGTGTCTCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR CCA 72 bp ATGTGTAGCCACGAGGTAGCATTTCCTTTGGCATCCTaGAGAAACATGTCTCACTTAGGGTTGGACCTGTTA +
Preference number: 3 (lower is better)
Translates to: MCSHEVAFPLAS*RNMSHLGLDLL
Trigger: TAACAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTCGTGGCTACACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
3UTR-3UTR CAA 90 bp ACAGTCACCACATTCAGAGCTAGAACCATGAAGGAAAACAGATGCACACTGTTGGAAACACCACCAAATTaGGATCTGAGGTGTGCAGAC +
Preference number: 3 (lower is better)
Translates to: TVTTFRARTMKENRCTLLETPPN*DLRCAD
Trigger: GTCTGCACACCTCAGATCCAAATTTGGTGGTGTTTC...CAACAGTGTGCATCTGTTTTCCTTCATGGTTCTAGCTCTGAATGTGGTGACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR CAA 90 bp AAGGCTGGTTTGGAGTTTCTTCCGCATGTGTTTCATGCTGAAATCCTGAATTGCGAAACACCACCAAATTaGGATCTGAGGTGTGCAGAC +
Preference number: 3 (lower is better)
Translates to: KAGLEFLPHVFHAEILNCETPPN*DLRCAD
Trigger: GTCTGCACACCTCAGATCCAAATTTGGTGGTGTTTC...GCAATTCAGGATTTCAGCATGAAACACATGCGGAAGAAACTCCAAACCAGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR CAA 90 bp CTGCAGCTTCTGGTATTTGTAGTCTGCCCGTTGATTTACAAAATGCCTCACTGTGAAGAAATGTCTCGTTaGCTTCTGGAGACACAACCT +
Preference number: 3 (lower is better)
Translates to: LQLLVFVVCPLIYKMPHCEEMSR*LLETQP
Trigger: AGGTTGTGTCTCCAGAAGCAAACGAGACATTTCTTC...ACAGTGAGGCATTTTGTAAATCAACGGGCAGACTACAAATACCAGAAGCTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR CAA 90 bp CCGTTGATTTACAAAATGCCTCACTGTGATTGTCGCTACAGTCACCACATTCAGATCCTGAATTGCCACTaGCACTTCGATCCCTTTTCA +
Preference number: 3 (lower is better)
Translates to: PLIYKMPHCDCRYSHHIQILNCH*HFDPFS
Trigger: TGAAAAGGGATCGAAGTGCAAGTGGCAATTCAGGAT...CTGAATGTGGTGACTGTAGCGACAATCACAGTGAGGCATTTTGTAAATCAACGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR CAA 90 bp CTGGTATTTGTAGTCTGCCCGTTGATTTACAAAATGCCTCACTGTGATTGTCGCATCCTGAATTGCCACTaGCACTTCGATCCCTTTTCA +
Preference number: 3 (lower is better)
Translates to: LVFVVCPLIYKMPHCDCRILNCH*HFDPFS
Trigger: TGAAAAGGGATCGAAGTGCAAGTGGCAATTCAGGAT...GCGACAATCACAGTGAGGCATTTTGTAAATCAACGGGCAGACTACAAATACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR TCA 72 bp TGTAGTCTGCCCGTTGATTTACAAAATGCCTCACTGTaGTTGTCGCTACAGTCACCACATTCAGAGCTAGAA +
Preference number: 3 (lower is better)
Translates to: CSLPVDLQNASL*LSLQSPHSELE
Trigger: TTCTAGCTCTGAATGTGGTGACTGTAGCGACAATCACAGTGAGGCATTTTGTAAATCAACGGGCAGACTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR GCA 72 bp ACCACATTCAGAGCTAGAACCATGAAGGAAAACAGATaGACACTGTTGAAAGGCTGGTTTGGAGTTTCTTCC +
Preference number: 3 (lower is better)
Translates to: TTFRARTMKENR*TLLKGWFGVSS
Trigger: GGAAGAAACTCCAAACCAGCCTTTCAACAGTGTGCATCTGTTTTCCTTCATGGTTCTAGCTCTGAATGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR CCA 72 bp GAAGGAAAACAGATGCACACTGTTGAAAGGCTGGTTTaGAGTTTCTTCCGCATGTGTTTCATGCTGAAATCC +
Preference number: 3 (lower is better)
Translates to: EGKQMHTVERLV*SFFRMCFMLKS
Trigger: GGATTTCAGCATGAAACACATGCGGAAGAAACTCCAAACCAGCCTTTCAACAGTGTGCATCTGTTTTCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR CAA 90 bp AAATGCCTCACTGTGATTGTCGCTACAGTCACCACATTCAGAGCTAGAACCATGGGTGTGCAGACTAACTaGAACAAAAAGAGTTTGGTT +
Preference number: 3 (lower is better)
Translates to: KCLTVIVATVTTFRARTMGVQTN*NKKSLV
Trigger: AACCAAACTCTTTTTGTTCAAGTTAGTCTGCACACC...CATGGTTCTAGCTCTGAATGTGGTGACTGTAGCGACAATCACAGTGAGGCATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR CAA 90 bp GACTGGTGGTCACTGCTATCACATATCAAAACTTTACACTGCAGATACACAGAGAACAGATGCACACTGTaGAAAGGCTGGTTTGGAGTT +
Preference number: 3 (lower is better)
Translates to: DWWSLLSHIKTLHCRYTENRCTL*KGWFGV
Trigger: AACTCCAAACCAGCCTTTCAACAGTGTGCATCTGTT...CTCTGTGTATCTGCAGTGTAAAGTTTTGATATGTGATAGCAGTGACCACCAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR CAA 90 bp TTTATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTTTGGCATCCTGGAGAGAGGTAGCATTTCCTTaGGCATCCTGGAGAAACATG +
Preference number: 3 (lower is better)
Translates to: FIHNMCSHEVAFPLASWREVAFP*ASWRNM
Trigger: CATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTC...TCTCCAGGATGCCAAAGGAAATGCTACCTCGTGGCTACACATATTATGAATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
3UTR TCA 72 bp CCCATTTCACACTTCACAATAATCTGGAGTTGTTTCTaGCGGGTGATCACTTCAGAAGTTGAGGATGCAGAA +
Preference number: 3 (lower is better)
Translates to: PISHFTIIWSCF*RVITSEVEDAE
Trigger: TTCTGCATCCTCAACTTCTGAAGTGATCACCCGTCAGAAACAACTCCAGATTATTGTGAAGTGTGAAATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
3UTR GCA 72 bp AGACACAACCTTGATTGCAGCGAGACTGGTGGTCACTaGTATCACATATCAAAACTTTACACTGCAGATACA +
Preference number: 3 (lower is better)
Translates to: RHNLDCSETGGH*YHISKLYTADT
Trigger: TGTATCTGCAGTGTAAAGTTTTGATATGTGATAGCAGTGACCACCAGTCTCGCTGCAATCAAGGTTGTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR CAA 90 bp ATTGTCGCTACAGTCACCACATTCAGAGCTAGAACCATGAAGGAAAACAGATGCGGTGTGCAGACTAACTaGAACAAAAAGAGTTTGGTT +
Preference number: 3 (lower is better)
Translates to: IVATVTTFRARTMKENRCGVQTN*NKKSLV
Trigger: AACCAAACTCTTTTTGTTCAAGTTAGTCTGCACACC...GCATCTGTTTTCCTTCATGGTTCTAGCTCTGAATGTGGTGACTGTAGCGACAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR CAA 90 bp AGCGAGACTGGTGGTCACTGCTATCACATATCAAAACTTTACACTGCAGATACATTTGTAGTCTGCCCGTaGATTTACAAAATGCCTCAC +
Preference number: 3 (lower is better)
Translates to: SETGGHCYHISKLYTADTFVVCP*IYKMPH
Trigger: GTGAGGCATTTTGTAAATCAACGGGCAGACTACAAA...TGTATCTGCAGTGTAAAGTTTTGATATGTGATAGCAGTGACCACCAGTCTCGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR CAA 90 bp AAGGCTGGTTTGGAGTTTCTTCCGCATGTGTTTCATGCTGAAATCCTGAATTGCGTAATCTTTCTCCACTaGTATGTGCCACACACAATA +
Preference number: 3 (lower is better)
Translates to: KAGLEFLPHVFHAEILNCVIFLH*YVPHTI
Trigger: TATTGTGTGTGGCACATACAAGTGGAGAAAGATTAC...GCAATTCAGGATTTCAGCATGAAACACATGCGGAAGAAACTCCAAACCAGCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR CAA 90 bp ATTGTCGCTACAGTCACCACATTCAGAGCTAGAACCATGAAGGAAAACAGATGCATTTTGGTCTGCAAGTaGGGTCTTTTAGTTGCAAGT +
Preference number: 3 (lower is better)
Translates to: IVATVTTFRARTMKENRCILVCK*GLLVAS
Trigger: ACTTGCAACTAAAAGACCCAACTTGCAGACCAAAAT...GCATCTGTTTTCCTTCATGGTTCTAGCTCTGAATGTGGTGACTGTAGCGACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
3UTR TCA 72 bp CTGGAGTTGTTTCTGACGGGTGATCACTTCAGAAGTTaGGGATGCAGAAAAGGTGATTATATTGGTGTAAGT +
Preference number: 3 (lower is better)
Translates to: LELFLTGDHFRS*GCRKGDYIGVS
Trigger: ACTTACACCAATATAATCACCTTTTCTGCATCCTCAACTTCTGAAGTGATCACCCGTCAGAAACAACTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR CAA 90 bp CACTGCTATCACATATCAAAACTTTACACTGCAGATACACAGAGCTCATACTTCCACAATAATCTGGAGTaGTTTCTGACGGGTGATCAC +
Preference number: 3 (lower is better)
Translates to: HCYHISKLYTADTQSSYFHNNLE*FLTGDH
Trigger: GTGATCACCCGTCAGAAACAACTCCAGATTATTGTG...GAAGTATGAGCTCTGTGTATCTGCAGTGTAAAGTTTTGATATGTGATAGCAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR CAA 90 bp ACTGCTATCACATATCAAAACTTTACACTGCAGATACACAGAGCTCATACTTCTGAAACACCACCAAATTaGGATCTGAGGTGTGCAGAC +
Preference number: 3 (lower is better)
Translates to: TAITYQNFTLQIHRAHTSETPPN*DLRCAD
Trigger: GTCTGCACACCTCAGATCCAAATTTGGTGGTGTTTC...AGAAGTATGAGCTCTGTGTATCTGCAGTGTAAAGTTTTGATATGTGATAGCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR CAA 90 bp ACAGTCACCACATTCAGAGCTAGAACCATGAAGGAAAACAGATGCACACTGTTGCAACATTTGATAATTTaGGTCTGCAAGTTGGGTCTT +
Preference number: 3 (lower is better)
Translates to: TVTTFRARTMKENRCTLLQHLII*VCKLGL
Trigger: AAGACCCAACTTGCAGACCAAAATTATCAAATGTTG...CAACAGTGTGCATCTGTTTTCCTTCATGGTTCTAGCTCTGAATGTGGTGACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR CAA 90 bp ACTGCTATCACATATCAAAACTTTACACTGCAGATACACAGAGCTCATACTTCTCACAATAATCTGGAGTaGTTTCTGACGGGTGATCAC +
Preference number: 3 (lower is better)
Translates to: TAITYQNFTLQIHRAHTSHNNLE*FLTGDH
Trigger: GTGATCACCCGTCAGAAACAACTCCAGATTATTGTG...AGAAGTATGAGCTCTGTGTATCTGCAGTGTAAAGTTTTGATATGTGATAGCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR CAA 90 bp TTTATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTTTGGCATCCTGGAGAATGTCTCACTTAGGGTaGGACCTGTTAGTTAATAGT +
Preference number: 3 (lower is better)
Translates to: FIHNMCSHEVAFPLASWRMSHLG*DLLVNS
Trigger: ACTATTAACTAACAGGTCCAACCCTAAGTGAGACAT...TCTCCAGGATGCCAAAGGAAATGCTACCTCGTGGCTACACATATTATGAATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR TCA 72 bp TCTACAGGTATCAAGAAACACCACCAAATTTGGATCTaGGGTGTGCAGACTAACTTGAACAAAAAGAGTTTG +
Preference number: 3 (lower is better)
Translates to: STGIKKHHQIWI*GVQTNLNKKSL
Trigger: CAAACTCTTTTTGTTCAAGTTAGTCTGCACACCTCAGATCCAAATTTGGTGGTGTTTCTTGATACCTGTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR GCA 72 bp AATCTGTTTTCCATTTATATGAAGAAATGTCTCGTTTaGTTCTGGAGACACAACCTTGATTGCAGCGAGACT +
Preference number: 3 (lower is better)
Translates to: NLFSIYMKKCLV*FWRHNLDCSET
Trigger: AGTCTCGCTGCAATCAAGGTTGTGTCTCCAGAAGCAAACGAGACATTTCTTCATATAAATGGAAAACAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR-3UTR CAA 90 bp TCTGTTTTCCATTTATATGAAGAAATGTCTCGTTTGCTTCTGGAGACACAACCTATGTCTCACTTAGGGTaGGACCTGTTAGTTAATAGT +
Preference number: 3 (lower is better)
Translates to: SVFHLYEEMSRLLLETQPMSHLG*DLLVNS
Trigger: ACTATTAACTAACAGGTCCAACCCTAAGTGAGACAT...AGGTTGTGTCTCCAGAAGCAAACGAGACATTTCTTCATATAAATGGAAAACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR GCA 72 bp TGGTGGTCACTGCTATCACATATCAAAACTTTACACTaGAGATACACAGAGCTCATACTTCTCAAGAATTTA +
Preference number: 3 (lower is better)
Translates to: WWSLLSHIKTLH*RYTELILLKNL
Trigger: TAAATTCTTGAGAAGTATGAGCTCTGTGTATCTGCAGTGTAAAGTTTTGATATGTGATAGCAGTGACCACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp GTATGTGCCACACACAATAAGCCAGCTCAGGATGCGGCTTTGGGTAATTGGGGCCCTTCCTGGAAGGGTTaGCCCCAGTGGAAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: VCATHNKPAQDAALGNWGPSWKG*PQWKLS
Trigger: AGAGAGCTTCCACTGGGGGCAACCCTTCCAGGAAGG...GCCCCAATTACCCAAAGCCGCATCCTGAGCTGGCTTATTGTGTGTGGCACATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp GGAGATGCAAAGTCAGAGGTGGGAGAGGCTCTACAGGTATCAAGAAACACCACCCCTTCCTGGAAGGGTTaGCCCCAGTGGAAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: GDAKSEVGEALQVSRNTTPSWKG*PQWKLS
Trigger: AGAGAGCTTCCACTGGGGGCAACCCTTCCAGGAAGG...GGTGGTGTTTCTTGATACCTGTAGAGCCTCTCCCACCTCTGACTTTGCATCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CCA 90 bp AGGATGCGGCTTTGGGTAATTGGGGCTGGTGAAGGATCCTTCCAAGGTATCCAGAAGGGTTGCCCCCAGTaGAAGCTCTCTGTAGGGATC +
Preference number: 4 (lower is better)
Translates to: RMRLWVIGAGEGSFQGIQKGCPQ*KLSVGI
Trigger: GATCCCTACAGAGAGCTTCCACTGGGGGCAACCCTT...CTGGATACCTTGGAAGGATCCTTCACCAGCCCCAATTACCCAAAGCCGCATCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
CDS-3UTR TCA 90 bp AGCCACGAGGTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTGGCACCCCCTAGACTaGCTGTGCAGCTTGCATTGC +
Preference number: 4 (lower is better)
Translates to: SHEVAFPLASWRNMSHLGWHPLD*LCSLHC
Trigger: GCAATGCAAGCTGCACAGTCAGTCTAGGGGGTGCCA...CCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTCGTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392790.6
CDS-3UTR GCA 90 bp GTATGTGCCACACACAATAAGCCAGCTCAGGATGCGGCTTTGGGTAATTGGGGCCTAGCAGAGGCCCATTaGTGGAGGTTCCGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: VCATHNKPAQDAALGNWGLAEAH*WRFRQR
Trigger: TCTTTGACGGAACCTCCAGCAATGGGCCTCTGCTAG...GCCCCAATTACCCAAAGCCGCATCCTGAGCTGGCTTATTGTGTGTGGCACATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CCA 90 bp GGTCGTAGGTTGGAGATGCAAAGTCAGAGGTGGGAGAGGCTCTACAGGTATCAATCAGGCCAGAGTTGGTaGAGGGGCCATCATAGATGG +
Preference number: 4 (lower is better)
Translates to: GRRLEMQSQRWERLYRYQSGQSW*RGHHRW
Trigger: CCATCTATGATGGCCCCTCCACCAACTCTGGCCTGA...TTGATACCTGTAGAGCCTCTCCCACCTCTGACTTTGCATCTCCAACCTACGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368901.5
CDS-3UTR TCA 90 bp GTATGTGCCACACACAATAAGCCAGCTCAGGATGCGGCTTTGGGTAATTGGGGCGGTAATTGGGGCTGGTaGAGGATCCTTCCAAGGTAT +
Preference number: 4 (lower is better)
Translates to: VCATHNKPAQDAALGNWGGNWGW*RILPRY
Trigger: ATACCTTGGAAGGATCCTTCACCAGCCCCAATTACC...GCCCCAATTACCCAAAGCCGCATCCTGAGCTGGCTTATTGTGTGTGGCACATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CCA 90 bp GCTTCTGGAGACACAACCTTGATTGCAGCGAGACTGGTGGTCACTGCTATCACACAATCAGGCCAGAGTTaGTGGAGGGGCCATCATAGA +
Preference number: 4 (lower is better)
Translates to: ASGDTTLIAARLVVTAITQSGQS*WRGHHR
Trigger: TCTATGATGGCCCCTCCACCAACTCTGGCCTGATTG...TGTGATAGCAGTGACCACCAGTCTCGCTGCAATCAAGGTTGTGTCTCCAGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368901.5
CDS-3UTR TCA 90 bp TCTGGAGACACAACCTTGATTGCAGCGAGACTGGTGGTCACTGCTATCACATATCTGGAGACACAACCTTaGTTGCAGCGAGACTGGTGG +
Preference number: 4 (lower is better)
Translates to: SGDTTLIAARLVVTAITYLETQP*LQRDWW
Trigger: CCACCAGTCTCGCTGCAATCAAGGTTGTGTCTCCAG...ATATGTGATAGCAGTGACCACCAGTCTCGCTGCAATCAAGGTTGTGTCTCCAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp GGTCGTAGGTTGGAGATGCAAAGTCAGAGGTGGGAGAGGCTCTACAGGTATCAAAGACACAACCTTGATTaGAGCGAGACTGGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: GRRLEMQSQRWERLYRYQRHNLD*SETGGH
Trigger: GTGACCACCAGTCTCGCTGCAATCAAGGTTGTGTCT...TTGATACCTGTAGAGCCTCTCCCACCTCTGACTTTGCATCTCCAACCTACGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp CACGAGGTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGACTGACTGTGCAGCTTaGATTGCCTTCAGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: HEVAFPLASWRNMSHLGLTDCAA*IAFSLR
Trigger: GCGGAGGCTGAAGGCAATGCAAGCTGCACAGTCAGT...CAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392790.6
CDS-3UTR CCA 90 bp CGAGGTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGATCAGGCCAGAGTTGGTaGAGGGGCCATCATAGATGG +
Preference number: 4 (lower is better)
Translates to: RGSISFGILEKHVSLRVGSGQSW*RGHHRW
Trigger: CCATCTATGATGGCCCCTCCACCAACTCTGGCCTGA...TCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CCA 90 bp AGCCACGAGGTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGCAATCAGGCCAGAGTTaGTGGAGGGGCCATCATAGA +
Preference number: 4 (lower is better)
Translates to: SHEVAFPLASWRNMSHLGQSGQS*WRGHHR
Trigger: TCTATGATGGCCCCTCCACCAACTCTGGCCTGATTG...CCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTCGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368901.5
ENST00000392790.6
CDS-3UTR TCA 90 bp AGGATGCGGCTTTGGGTAATTGGGGCTGGTGAAGGATCCTTCCAAGGTATCCAGGTTCCCAGCAGGCACTaGGTTATTTTCCATGAAACT +
Preference number: 4 (lower is better)
Translates to: RMRLWVIGAGEGSFQGIQVPSRH*VIFHET
Trigger: AGTTTCATGGAAAATAACTCAGTGCCTGCTGGGAAC...CTGGATACCTTGGAAGGATCCTTCACCAGCCCCAATTACCCAAAGCCGCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
CDS-3UTR TCA 90 bp GCTTCTGGAGACACAACCTTGATTGCAGCGAGACTGGTGGTCACTGCTATCACAGTTGTTTCTGACGGGTaGTCACTTCAGAAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: ASGDTTLIAARLVVTAITVVSDG*SLQKLR
Trigger: CCTCAACTTCTGAAGTGATCACCCGTCAGAAACAAC...TGTGATAGCAGTGACCACCAGTCTCGCTGCAATCAAGGTTGTGTCTCCAGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR TCA 90 bp AGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGTTCTGGAGACACAACCTTaGTTGCAGCGAGACTGGTGG +
Preference number: 4 (lower is better)
Translates to: SISFGILEKHVSLRVGPVLETQP*LQRDWW
Trigger: CCACCAGTCTCGCTGCAATCAAGGTTGTGTCTCCAG...AACAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR TCA 90 bp AAGTCAGAGGTGGGAGAGGCTCTACAGGTATCAAGAAACACCACCAAATTTGGACTGGAGACACAACCTTaGTTGCAGCGAGACTGGTGG +
Preference number: 4 (lower is better)
Translates to: KSEVGEALQVSRNTTKFGLETQP*LQRDWW
Trigger: CCACCAGTCTCGCTGCAATCAAGGTTGTGTCTCCAG...TCCAAATTTGGTGGTGTTTCTTGATACCTGTAGAGCCTCTCCCACCTCTGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR TCA 90 bp GCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGTTACTGGAGACACAACCTTaGTTGCAGCGAGACTGGTGG +
Preference number: 4 (lower is better)
Translates to: AFPLASWRNMSHLGLDLLLETQP*LQRDWW
Trigger: CCACCAGTCTCGCTGCAATCAAGGTTGTGTCTCCAG...TAACAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR TCA 90 bp GTATGTGCCACACACAATAAGCCAGCTCAGGATGCGGCTTTGGGTAATTGGGGCTCAGAGCTAGAACCATaGAGGAAAACAGATGCACAC +
Preference number: 4 (lower is better)
Translates to: VCATHNKPAQDAALGNWGSELEP*RKTDAH
Trigger: GTGTGCATCTGTTTTCCTTCATGGTTCTAGCTCTGA...GCCCCAATTACCCAAAGCCGCATCCTGAGCTGGCTTATTGTGTGTGGCACATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp CGAGGTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACTAGCAGAGGCCCATTaGTGGAGGTTCCGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: RGSISFGILEKHVSLRVGLAEAH*WRFRQR
Trigger: TCTTTGACGGAACCTCCAGCAATGGGCCTCTGCTAG...TCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR GCA 90 bp GCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGTTACTGTGCAGCTTGCATTaGCTTCAGCCTCCGCCATTG +
Preference number: 4 (lower is better)
Translates to: AFPLASWRNMSHLGLDLLLCSLH*LQPPPL
Trigger: CAATGGCGGAGGCTGAAGGCAATGCAAGCTGCACAG...TAACAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392790.6
CDS-3UTR CCA 90 bp GCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGTTAAAGGGTTGCCCCCAGTaGAAGCTCTCTGTAGGGATC +
Preference number: 4 (lower is better)
Translates to: AFPLASWRNMSHLGLDLLKGCPQ*KLSVGI
Trigger: GATCCCTACAGAGAGCTTCCACTGGGGGCAACCCTT...TAACAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CCA 90 bp GCTTCTGGAGACACAACCTTGATTGCAGCGAGACTGGTGGTCACTGCTATCACATTGCAGCGAGACTGGTaGTCACTGCTATCACATATC +
Preference number: 4 (lower is better)
Translates to: ASGDTTLIAARLVVTAITLQRDW*SLLSHI
Trigger: GATATGTGATAGCAGTGACCACCAGTCTCGCTGCAA...TGTGATAGCAGTGACCACCAGTCTCGCTGCAATCAAGGTTGTGTCTCCAGAAGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR TCA 90 bp AGCCACGAGGTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGGACTACATCCACTCTTaGTTAGGTCGTAGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: SHEVAFPLASWRNMSHLGDYIHS*LGRRLE
Trigger: CTCCAACCTACGACCTAATCAAGAGTGGATGTAGTC...CCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTCGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR TCA 90 bp GCTTCTGGAGACACAACCTTGATTGCAGCGAGACTGGTGGTCACTGCTATCACATTCATGCTGAAATCCTaGATTGCCACTTGCACTTCG +
Preference number: 4 (lower is better)
Translates to: ASGDTTLIAARLVVTAITFMLKS*IATCTS
Trigger: CGAAGTGCAAGTGGCAATTCAGGATTTCAGCATGAA...TGTGATAGCAGTGACCACCAGTCTCGCTGCAATCAAGGTTGTGTCTCCAGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR TCA 90 bp GTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGGGTAATTGGGGCTGGTaGAGGATCCTTCCAAGGTAT +
Preference number: 4 (lower is better)
Translates to: VAFPLASWRNMSHLGLDLGNWGW*RILPRY
Trigger: ATACCTTGGAAGGATCCTTCACCAGCCCCAATTACC...CAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR GCA 90 bp CTCACTGTGATTGTCGCTACAGTCACCACATTCAGAGCTAGAACCATGAAGGAAACTGATGGGGAGCTGTaGCTTTCTTCTGTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LTVIVATVTTFRARTMKETDGEL*LSSVPA
Trigger: TGCAGGCACAGAAGAAAGGCACAGCTCCCCATCAGT...TTCCTTCATGGTTCTAGCTCTGAATGTGGTGACTGTAGCGACAATCACAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp AACCATGAAGGAAAACAGATGCACACTGTTGAAAGGCTGGTTTGGAGTTTCTTCCCTTCCTGGAAGGGTTaGCCCCAGTGGAAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: NHEGKQMHTVERLVWSFFPSWKG*PQWKLS
Trigger: AGAGAGCTTCCACTGGGGGCAACCCTTCCAGGAAGG...GAAGAAACTCCAAACCAGCCTTTCAACAGTGTGCATCTGTTTTCCTTCATGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp GTCAGAGGTGGGAGAGGCTCTACAGGTATCAAGAAACACCACCAAATTTGGATCAGACACAACCTTGATTaGAGCGAGACTGGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: VRGGRGSTGIKKHHQIWIRHNLD*SETGGH
Trigger: GTGACCACCAGTCTCGCTGCAATCAAGGTTGTGTCT...GATCCAAATTTGGTGGTGTTTCTTGATACCTGTAGAGCCTCTCCCACCTCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp GGTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTAGACACAACCTTGATTaGAGCGAGACTGGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: GSISFGILEKHVSLRVGPRHNLD*SETGGH
Trigger: GTGACCACCAGTCTCGCTGCAATCAAGGTTGTGTCT...AGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR GCA 90 bp GGTCGTAGGTTGGAGATGCAAAGTCAGAGGTGGGAGAGGCTCTACAGGTATCAACATAGTCGTTTTTACTaGAGACTTGCCCTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: GRRLEMQSQRWERLYRYQHSRFY*RLALAE
Trigger: CTCTGCTAGGGCAAGTCTGCAGTAAAAACGACTATG...TTGATACCTGTAGAGCCTCTCCCACCTCTGACTTTGCATCTCCAACCTACGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp AGCCACGAGGTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTCACTGGGATTGAGTTaGAGGATCATGGCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: SHEVAFPLASWRNMSHLGSLGLS*RIMALW
Trigger: CCACAAAGCCATGATCCTGCAACTCAATCCCAGTGA...CCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTCGTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392790.6
CDS-3UTR CCA 90 bp TTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGTTAGTTAAGGGTTGCCCCCAGTaGAAGCTCTCTGTAGGGATC +
Preference number: 4 (lower is better)
Translates to: FPLASWRNMSHLGLDLLVKGCPQ*KLSVGI
Trigger: GATCCCTACAGAGAGCTTCCACTGGGGGCAACCCTT...AACTAACAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CCA 90 bp GTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGGAGCAGCTGTGTGACTaGTTTATCAGCATTCCCCAC +
Preference number: 4 (lower is better)
Translates to: VAFPLASWRNMSHLGLDLEQLCD*FISIPH
Trigger: GTGGGGAATGCTGATAAACCAGTCACACAGCTGCTC...CAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CCA 90 bp AAGTCAGAGGTGGGAGAGGCTCTACAGGTATCAAGAAACACCACCAAATTTGGAGCAGAGGCCCATTGCTaGAGGTTCCGTCAAAGACTT +
Preference number: 4 (lower is better)
Translates to: KSEVGEALQVSRNTTKFGAEAHC*RFRQRL
Trigger: AAGTCTTTGACGGAACCTCCAGCAATGGGCCTCTGC...TCCAAATTTGGTGGTGTTTCTTGATACCTGTAGAGCCTCTCCCACCTCTGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CCA 90 bp TGCAAAGTCAGAGGTGGGAGAGGCTCTACAGGTATCAAGAAACACCACCAAATTCTCAGGATGCGGCTTTaGGTAATTGGGGCTGGTGAA +
Preference number: 4 (lower is better)
Translates to: CKVRGGRGSTGIKKHHQILRMRL*VIGAGE
Trigger: TTCACCAGCCCCAATTACCCAAAGCCGCATCCTGAG...AATTTGGTGGTGTTTCTTGATACCTGTAGAGCCTCTCCCACCTCTGACTTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CCA 90 bp AGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGTTATGACGATTCGAAGGTaGGAGTCACACGGCCACAGA +
Preference number: 4 (lower is better)
Translates to: SISFGILEKHVSLRVGPVMTIRR*ESHGHR
Trigger: TCTGTGGCCGTGTGACTCCCACCTTCGAATCGTCAT...AACAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368901.5
ENST00000392790.6
CDS-3UTR TCA 90 bp GCTTCTGGAGACACAACCTTGATTGCAGCGAGACTGGTGGTCACTGCTATCACAGATCACTTCAGAAGTTaGGGATGCAGAAAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: ASGDTTLIAARLVVTAITDHFRS*GCRKGD
Trigger: ATCACCTTTTCTGCATCCTCAACTTCTGAAGTGATC...TGTGATAGCAGTGACCACCAGTCTCGCTGCAATCAAGGTTGTGTCTCCAGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR TCA 90 bp GGAGATGCAAAGTCAGAGGTGGGAGAGGCTCTACAGGTATCAAGAAACACCACCGATCACTTCAGAAGTTaGGGATGCAGAAAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: GDAKSEVGEALQVSRNTTDHFRS*GCRKGD
Trigger: ATCACCTTTTCTGCATCCTCAACTTCTGAAGTGATC...GGTGGTGTTTCTTGATACCTGTAGAGCCTCTCCCACCTCTGACTTTGCATCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp TGCAAAGTCAGAGGTGGGAGAGGCTCTACAGGTATCAAGAAACACCACCAAATTCCTTTCTTCTGTGCCTaGACATCACAAACAGGTGGC +
Preference number: 4 (lower is better)
Translates to: CKVRGGRGSTGIKKHHQIPFFCA*TSQTGG
Trigger: GCCACCTGTTTGTGATGTGCAGGCACAGAAGAAAGG...AATTTGGTGGTGTTTCTTGATACCTGTAGAGCCTCTCCCACCTCTGACTTTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp CTCACTGTGATTGTCGCTACAGTCACCACATTCAGAGCTAGAACCATGAAGGAACCTTTCTTCTGTGCCTaGACATCACAAACAGGTGGC +
Preference number: 4 (lower is better)
Translates to: LTVIVATVTTFRARTMKEPFFCA*TSQTGG
Trigger: GCCACCTGTTTGTGATGTGCAGGCACAGAAGAAAGG...TTCCTTCATGGTTCTAGCTCTGAATGTGGTGACTGTAGCGACAATCACAGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp TCTGGAGACACAACCTTGATTGCAGCGAGACTGGTGGTCACTGCTATCACATATTGTGCCTTTCTTCTGTaGCTGCACATCACAAACAGG +
Preference number: 4 (lower is better)
Translates to: SGDTTLIAARLVVTAITYCAFLL*LHITNR
Trigger: CCTGTTTGTGATGTGCAGGCACAGAAGAAAGGCACA...ATATGTGATAGCAGTGACCACCAGTCTCGCTGCAATCAAGGTTGTGTCTCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp AGGATGCGGCTTTGGGTAATTGGGGCTGGTGAAGGATCCTTCCAAGGTATCCAGAAGAAATGTCTCGTTTaGTTCTGGAGACACAACCTT +
Preference number: 4 (lower is better)
Translates to: RMRLWVIGAGEGSFQGIQKKCLV*FWRHNL
Trigger: AAGGTTGTGTCTCCAGAAGCAAACGAGACATTTCTT...CTGGATACCTTGGAAGGATCCTTCACCAGCCCCAATTACCCAAAGCCGCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp AAGGCTGGTTTGGAGTTTCTTCCGCATGTGTTTCATGCTGAAATCCTGAATTGCCTAGCAGAGGCCCATTaGTGGAGGTTCCGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: KAGLEFLPHVFHAEILNCLAEAH*WRFRQR
Trigger: TCTTTGACGGAACCTCCAGCAATGGGCCTCTGCTAG...GCAATTCAGGATTTCAGCATGAAACACATGCGGAAGAAACTCCAAACCAGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CCA 90 bp GCTACAGTCACCACATTCAGAGCTAGAACCATGAAGGAAAACAGATGCACACTGGAGCAGCTGTGTGACTaGTTTATCAGCATTCCCCAC +
Preference number: 4 (lower is better)
Translates to: ATVTTFRARTMKENRCTLEQLCD*FISIPH
Trigger: GTGGGGAATGCTGATAAACCAGTCACACAGCTGCTC...CAGTGTGCATCTGTTTTCCTTCATGGTTCTAGCTCTGAATGTGGTGACTGTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CCA 90 bp CACGAGGTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGATGCAAAGTCAGAGGTaGGAGAGGCTCTACAGGTAT +
Preference number: 4 (lower is better)
Translates to: HEVAFPLASWRNMSHLGLMQSQR*ERLYRY
Trigger: ATACCTGTAGAGCCTCTCCCACCTCTGACTTTGCAT...CAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTCGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CCA 90 bp TCTGGAGACACAACCTTGATTGCAGCGAGACTGGTGGTCACTGCTATCACATATTTGCAGCGAGACTGGTaGTCACTGCTATCACATATC +
Preference number: 4 (lower is better)
Translates to: SGDTTLIAARLVVTAITYLQRDW*SLLSHI
Trigger: GATATGTGATAGCAGTGACCACCAGTCTCGCTGCAA...ATATGTGATAGCAGTGACCACCAGTCTCGCTGCAATCAAGGTTGTGTCTCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CCA 90 bp CGAGGTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGATTGCAGCGAGACTGGTaGTCACTGCTATCACATATC +
Preference number: 4 (lower is better)
Translates to: RGSISFGILEKHVSLRVGLQRDW*SLLSHI
Trigger: GATATGTGATAGCAGTGACCACCAGTCTCGCTGCAA...TCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CCA 90 bp AGCCACGAGGTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTGTCTCGTTTGCTTCTaGAGACACAACCTTGATTGC +
Preference number: 4 (lower is better)
Translates to: SHEVAFPLASWRNMSHLGCLVCF*RHNLDC
Trigger: GCAATCAAGGTTGTGTCTCCAGAAGCAAACGAGACA...CCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTCGTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CCA 90 bp GTTTGCTTCTGGAGACACAACCTTGATTGCAGCGAGACTGGTGGTCACTGCTATACACTGTTGAAAGGCTaGTTTGGAGTTTCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: VCFWRHNLDCSETGGHCYTLLKG*FGVSSA
Trigger: TGCGGAAGAAACTCCAAACCAGCCTTTCAACAGTGT...ATAGCAGTGACCACCAGTCTCGCTGCAATCAAGGTTGTGTCTCCAGAAGCAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CCA 90 bp CTCACTGTGATTGTCGCTACAGTCACCACATTCAGAGCTAGAACCATGAAGGAATTCACAGCTTCCATCTaGATCAAGCCTTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: LTVIVATVTTFRARTMKEFTASI*IKPSAS
Trigger: GGAGGCTGAAGGCTTGATCCAGATGGAAGCTGTGAA...TTCCTTCATGGTTCTAGCTCTGAATGTGGTGACTGTAGCGACAATCACAGTGAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CCA 90 bp CATAATATGTGTAGCCACGAGGTAGCATTTCCTTTGGCATCCTGGAGAAACATGGCAGAGGCCCATTGCTaGAGGTTCCGTCAAAGACTT +
Preference number: 4 (lower is better)
Translates to: HNMCSHEVAFPLASWRNMAEAHC*RFRQRL
Trigger: AAGTCTTTGACGGAACCTCCAGCAATGGGCCTCTGC...CATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTCGTGGCTACACATATTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CCA 90 bp ACAGTCACCACATTCAGAGCTAGAACCATGAAGGAAAACAGATGCACACTGTTGCTCAGGATGCGGCTTTaGGTAATTGGGGCTGGTGAA +
Preference number: 4 (lower is better)
Translates to: TVTTFRARTMKENRCTLLLRMRL*VIGAGE
Trigger: TTCACCAGCCCCAATTACCCAAAGCCGCATCCTGAG...CAACAGTGTGCATCTGTTTTCCTTCATGGTTCTAGCTCTGAATGTGGTGACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CCA 90 bp TTGCAGCGAGACTGGTGGTCACTGCTATCACATATCAAAACTTTACACTGCAGAATGACGATTCGAAGGTaGGAGTCACACGGCCACAGA +
Preference number: 4 (lower is better)
Translates to: LQRDWWSLLSHIKTLHCRMTIRR*ESHGHR
Trigger: TCTGTGGCCGTGTGACTCCCACCTTCGAATCGTCAT...TCTGCAGTGTAAAGTTTTGATATGTGATAGCAGTGACCACCAGTCTCGCTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368901.5
CDS-3UTR TCA 90 bp AAATGCCTCACTGTGATTGTCGCTACAGTCACCACATTCAGAGCTAGAACCATGGTTGTTTCTGACGGGTaGTCACTTCAGAAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: KCLTVIVATVTTFRARTMVVSDG*SLQKLR
Trigger: CCTCAACTTCTGAAGTGATCACCCGTCAGAAACAAC...CATGGTTCTAGCTCTGAATGTGGTGACTGTAGCGACAATCACAGTGAGGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR TCA 90 bp TCTGGAGACACAACCTTGATTGCAGCGAGACTGGTGGTCACTGCTATCACATATATCTGGAGTTGTTTCTaGCGGGTGATCACTTCAGAA +
Preference number: 4 (lower is better)
Translates to: SGDTTLIAARLVVTAITYIWSCF*RVITSE
Trigger: TTCTGAAGTGATCACCCGTCAGAAACAACTCCAGAT...ATATGTGATAGCAGTGACCACCAGTCTCGCTGCAATCAAGGTTGTGTCTCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR TCA 90 bp TGCTTCTGGAGACACAACCTTGATTGCAGCGAGACTGGTGGTCACTGCTATCACGTGTGCAGACTAACTTaGACAAAAAGAGTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: CFWRHNLDCSETGGHCYHVCRLT*TKRVWF
Trigger: GAACCAAACTCTTTTTGTTCAAGTTAGTCTGCACAC...GTGATAGCAGTGACCACCAGTCTCGCTGCAATCAAGGTTGTGTCTCCAGAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp AACCATGAAGGAAAACAGATGCACACTGTTGAAAGGCTGGTTTGGAGTTTCTTCACTGATGGGGAGCTGTaGCTTTCTTCTGTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: NHEGKQMHTVERLVWSFFTDGEL*LSSVPA
Trigger: TGCAGGCACAGAAGAAAGGCACAGCTCCCCATCAGT...GAAGAAACTCCAAACCAGCCTTTCAACAGTGTGCATCTGTTTTCCTTCATGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp TTGCAGCGAGACTGGTGGTCACTGCTATCACATATCAAAACTTTACACTGCAGAGTCGTAGGTTGGAGATaGAAAGTCAGAGGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: LQRDWWSLLSHIKTLHCRVVGWR*KVRGGR
Trigger: TCTCCCACCTCTGACTTTGCATCTCCAACCTACGAC...TCTGCAGTGTAAAGTTTTGATATGTGATAGCAGTGACCACCAGTCTCGCTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp AAGGCTGGTTTGGAGTTTCTTCCGCATGTGTTTCATGCTGAAATCCTGAATTGCGTCGTAGGTTGGAGATaGAAAGTCAGAGGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: KAGLEFLPHVFHAEILNCVVGWR*KVRGGR
Trigger: TCTCCCACCTCTGACTTTGCATCTCCAACCTACGAC...GCAATTCAGGATTTCAGCATGAAACACATGCGGAAGAAACTCCAAACCAGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp CATAATATGTGTAGCCACGAGGTAGCATTTCCTTTGGCATCCTGGAGAAACATGGTCGTAGGTTGGAGATaGAAAGTCAGAGGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: HNMCSHEVAFPLASWRNMVVGWR*KVRGGR
Trigger: TCTCCCACCTCTGACTTTGCATCTCCAACCTACGAC...CATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTCGTGGCTACACATATTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR GCA 90 bp CATAATATGTGTAGCCACGAGGTAGCATTTCCTTTGGCATCCTGGAGAAACATGAGACACAACCTTGATTaGAGCGAGACTGGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: HNMCSHEVAFPLASWRNMRHNLD*SETGGH
Trigger: GTGACCACCAGTCTCGCTGCAATCAAGGTTGTGTCT...CATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTCGTGGCTACACATATTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR GCA 90 bp AGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGTTTTTTTACTGCAGACTTaGCCTAGCAGAGGCCCATTG +
Preference number: 4 (lower is better)
Translates to: SISFGILEKHVSLRVGPVFLLQT*PSRGPL
Trigger: CAATGGGCCTCTGCTAGGGCAAGTCTGCAGTAAAAA...AACAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCT
47% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CCA 90 bp AGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGTTATGCAAAGTCAGAGGTaGGAGAGGCTCTACAGGTAT +
Preference number: 4 (lower is better)
Translates to: SISFGILEKHVSLRVGPVMQSQR*ERLYRY
Trigger: ATACCTGTAGAGCCTCTCCCACCTCTGACTTTGCAT...AACAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CCA 90 bp CACGAGGTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGTGTCTCGTTTGCTTCTaGAGACACAACCTTGATTGC +
Preference number: 4 (lower is better)
Translates to: HEVAFPLASWRNMSHLGLCLVCF*RHNLDC
Trigger: GCAATCAAGGTTGTGTCTCCAGAAGCAAACGAGACA...CAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTCGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CCA 90 bp GAGGTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACGTTGAAAGGCTGGTTTaGAGTTTCTTCCGCATGTGT +
Preference number: 4 (lower is better)
Translates to: EVAFPLASWRNMSHLGLDVERLV*SFFRMC
Trigger: ACACATGCGGAAGAAACTCCAAACCAGCCTTTCAAC...GTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CCA 90 bp GGTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTACACTGTTGAAAGGCTaGTTTGGAGTTTCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: GSISFGILEKHVSLRVGPTLLKG*FGVSSA
Trigger: TGCGGAAGAAACTCCAAACCAGCCTTTCAACAGTGT...AGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CCA 90 bp TTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGTTAGTTTTCACAGCTTCCATCTaGATCAAGCCTTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: FPLASWRNMSHLGLDLLVFTASI*IKPSAS
Trigger: GGAGGCTGAAGGCTTGATCCAGATGGAAGCTGTGAA...AACTAACAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CCA 90 bp AGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGTTAGGATCATGGCTTTGTaGGTCTCTGCCATATTGGCA +
Preference number: 4 (lower is better)
Translates to: SISFGILEKHVSLRVGPVRIMAL*VSAILA
Trigger: TGCCAATATGGCAGAGACCCACAAAGCCATGATCCT...AACAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392790.6
CDS-3UTR CCA 90 bp CGAGGTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGATTCACAGCTTCCATCTaGATCAAGCTGGACATAGGA +
Preference number: 4 (lower is better)
Translates to: RGSISFGILEKHVSLRVGFTASI*IKLDIG
Trigger: TCCTATGTCCAGCTTGATCCAGATGGAAGCTGTGAA...TCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392790.6
CDS-3UTR TCA 90 bp AAATGCCTCACTGTGATTGTCGCTACAGTCACCACATTCAGAGCTAGAACCATGATCTGGAGTTGTTTCTaGCGGGTGATCACTTCAGAA +
Preference number: 4 (lower is better)
Translates to: KCLTVIVATVTTFRARTMIWSCF*RVITSE
Trigger: TTCTGAAGTGATCACCCGTCAGAAACAACTCCAGAT...CATGGTTCTAGCTCTGAATGTGGTGACTGTAGCGACAATCACAGTGAGGCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR TCA 90 bp GCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGTTAATCTGGAGTTGTTTCTaGCGGGTGATCACTTCAGAA +
Preference number: 4 (lower is better)
Translates to: AFPLASWRNMSHLGLDLLIWSCF*RVITSE
Trigger: TTCTGAAGTGATCACCCGTCAGAAACAACTCCAGAT...TAACAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR TCA 90 bp TGCAAAGTCAGAGGTGGGAGAGGCTCTACAGGTATCAAGAAACACCACCAAATTCACCAAATTTGGATCTaGGGTGTGCAGACTAACTTG +
Preference number: 4 (lower is better)
Translates to: CKVRGGRGSTGIKKHHQIHQIWI*GVQTNL
Trigger: CAAGTTAGTCTGCACACCTCAGATCCAAATTTGGTG...AATTTGGTGGTGTTTCTTGATACCTGTAGAGCCTCTCCCACCTCTGACTTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR TCA 90 bp GCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGTTACACCAAATTTGGATCTaGGGTGTGCAGACTAACTTG +
Preference number: 4 (lower is better)
Translates to: AFPLASWRNMSHLGLDLLHQIWI*GVQTNL
Trigger: CAAGTTAGTCTGCACACCTCAGATCCAAATTTGGTG...TAACAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR TCA 90 bp AGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGTTCACCAAATTTGGATCTaGGGTGTGCAGACTAACTTG +
Preference number: 4 (lower is better)
Translates to: SISFGILEKHVSLRVGPVHQIWI*GVQTNL
Trigger: CAAGTTAGTCTGCACACCTCAGATCCAAATTTGGTG...AACAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR TCA 90 bp ATTGTCGCTACAGTCACCACATTCAGAGCTAGAACCATGAAGGAAAACAGATGCGACTACATCCACTCTTaGTTAGGTCGTAGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: IVATVTTFRARTMKENRCDYIHS*LGRRLE
Trigger: CTCCAACCTACGACCTAATCAAGAGTGGATGTAGTC...GCATCTGTTTTCCTTCATGGTTCTAGCTCTGAATGTGGTGACTGTAGCGACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR TCA 90 bp AAATGCCTCACTGTGATTGTCGCTACAGTCACCACATTCAGAGCTAGAACCATGTTCATGCTGAAATCCTaGATTGCCACTTGCACTTCG +
Preference number: 4 (lower is better)
Translates to: KCLTVIVATVTTFRARTMFMLKS*IATCTS
Trigger: CGAAGTGCAAGTGGCAATTCAGGATTTCAGCATGAA...CATGGTTCTAGCTCTGAATGTGGTGACTGTAGCGACAATCACAGTGAGGCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR TCA 90 bp AGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGTTTTCATGCTGAAATCCTaGATTGCCACTTGCACTTCG +
Preference number: 4 (lower is better)
Translates to: SISFGILEKHVSLRVGPVFMLKS*IATCTS
Trigger: CGAAGTGCAAGTGGCAATTCAGGATTTCAGCATGAA...AACAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR TCA 90 bp GCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGTTATCAGAGCTAGAACCATaGAGGAAAACAGATGCACAC +
Preference number: 4 (lower is better)
Translates to: AFPLASWRNMSHLGLDLLSELEP*RKTDAH
Trigger: GTGTGCATCTGTTTTCCTTCATGGTTCTAGCTCTGA...TAACAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR GCA 90 bp GCGAGACTGGTGGTCACTGCTATCACATATCAAAACTTTACACTGCAGATACACTGTGCCTTTCTTCTGTaGCTGCACATCACAAACAGG +
Preference number: 4 (lower is better)
Translates to: ARLVVTAITYQNFTLQIHCAFLL*LHITNR
Trigger: CCTGTTTGTGATGTGCAGGCACAGAAGAAAGGCACA...GTGTATCTGCAGTGTAAAGTTTTGATATGTGATAGCAGTGACCACCAGTCTCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp GCTTCTGGAGACACAACCTTGATTGCAGCGAGACTGGTGGTCACTGCTATCACAATTCAAAAAGAGCCATaGTGGTGTTATATTTGCCCA +
Preference number: 4 (lower is better)
Translates to: ASGDTTLIAARLVVTAITIQKEP*WCYICP
Trigger: TGGGCAAATATAACACCAGCATGGCTCTTTTTGAAT...TGTGATAGCAGTGACCACCAGTCTCGCTGCAATCAAGGTTGTGTCTCCAGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp GCTAGAACCATGAAGGAAAACAGATGCACACTGTTGAAAGGCTGGTTTGGAGTTGCTGAAATCCTGAATTaGCACTTGCACTTCGATCCC +
Preference number: 4 (lower is better)
Translates to: ARTMKENRCTLLKGWFGVAEILN*HLHFDP
Trigger: GGGATCGAAGTGCAAGTGGCAATTCAGGATTTCAGC...AACTCCAAACCAGCCTTTCAACAGTGTGCATCTGTTTTCCTTCATGGTTCTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp GTCAGAGGTGGGAGAGGCTCTACAGGTATCAAGAAACACCACCAAATTTGGATCATGAAGGAAAACAGATaGACACTGTTGAAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: VRGGRGSTGIKKHHQIWIMKENR*TLLKGW
Trigger: CCAGCCTTTCAACAGTGTGCATCTGTTTTCCTTCAT...GATCCAAATTTGGTGGTGTTTCTTGATACCTGTAGAGCCTCTCCCACCTCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp GTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGATGAAGGAAAACAGATaGACACTGTTGAAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: VAFPLASWRNMSHLGLDLMKENR*TLLKGW
Trigger: CCAGCCTTTCAACAGTGTGCATCTGTTTTCCTTCAT...CAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR GCA 90 bp TTGCAGCGAGACTGGTGGTCACTGCTATCACATATCAAAACTTTACACTGCAGATTTTTACTGCAGACTTaGCCTAGCAGAGGCCCATTG +
Preference number: 4 (lower is better)
Translates to: LQRDWWSLLSHIKTLHCRFLLQT*PSRGPL
Trigger: CAATGGGCCTCTGCTAGGGCAAGTCTGCAGTAAAAA...TCTGCAGTGTAAAGTTTTGATATGTGATAGCAGTGACCACCAGTCTCGCTGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CCA 90 bp CATAATATGTGTAGCCACGAGGTAGCATTTCCTTTGGCATCCTGGAGAAACATGATGCAAAGTCAGAGGTaGGAGAGGCTCTACAGGTAT +
Preference number: 4 (lower is better)
Translates to: HNMCSHEVAFPLASWRNMMQSQR*ERLYRY
Trigger: ATACCTGTAGAGCCTCTCCCACCTCTGACTTTGCAT...CATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTCGTGGCTACACATATTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CCA 90 bp TTGCAGCGAGACTGGTGGTCACTGCTATCACATATCAAAACTTTACACTGCAGATTGCAGCGAGACTGGTaGTCACTGCTATCACATATC +
Preference number: 4 (lower is better)
Translates to: LQRDWWSLLSHIKTLHCRLQRDW*SLLSHI
Trigger: GATATGTGATAGCAGTGACCACCAGTCTCGCTGCAA...TCTGCAGTGTAAAGTTTTGATATGTGATAGCAGTGACCACCAGTCTCGCTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CCA 90 bp GCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGTTAGTTGAAAGGCTGGTTTaGAGTTTCTTCCGCATGTGT +
Preference number: 4 (lower is better)
Translates to: AFPLASWRNMSHLGLDLLVERLV*SFFRMC
Trigger: ACACATGCGGAAGAAACTCCAAACCAGCCTTTCAAC...TAACAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CCA 90 bp AGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGTTGTTGAAAGGCTGGTTTaGAGTTTCTTCCGCATGTGT +
Preference number: 4 (lower is better)
Translates to: SISFGILEKHVSLRVGPVVERLV*SFFRMC
Trigger: ACACATGCGGAAGAAACTCCAAACCAGCCTTTCAAC...AACAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CCA 90 bp GCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGTTAACACTGTTGAAAGGCTaGTTTGGAGTTTCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: AFPLASWRNMSHLGLDLLTLLKG*FGVSSA
Trigger: TGCGGAAGAAACTCCAAACCAGCCTTTCAACAGTGT...TAACAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CCA 90 bp TTTATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTTTGGCATCCTGGAGAGCAGAGGCCCATTGCTaGAGGTTCCGTCAAAGACTT +
Preference number: 4 (lower is better)
Translates to: FIHNMCSHEVAFPLASWRAEAHC*RFRQRL
Trigger: AAGTCTTTGACGGAACCTCCAGCAATGGGCCTCTGC...TCTCCAGGATGCCAAAGGAAATGCTACCTCGTGGCTACACATATTATGAATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CCA 90 bp GGTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGTAACCGCCACAGTTTaGAATAGAGATGTTAGGAGA +
Preference number: 4 (lower is better)
Translates to: GSISFGILEKHVSLRVGPVTATV*NRDVRR
Trigger: TCTCCTAACATCTCTATTCCAAACTGTGGCGGTTAC...AGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CCA 90 bp TCATTTATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTTTGGCATCCTGGCTCAGGATGCGGCTTTaGGTAATTGGGGCTGGTGAA +
Preference number: 4 (lower is better)
Translates to: SFIHNMCSHEVAFPLASWLRMRL*VIGAGE
Trigger: TTCACCAGCCCCAATTACCCAAAGCCGCATCCTGAG...CCAGGATGCCAAAGGAAATGCTACCTCGTGGCTACACATATTATGAATAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR TCA 90 bp CATAATATGTGTAGCCACGAGGTAGCATTTCCTTTGGCATCCTGGAGAAACATGGTTCCCAGCAGGCACTaGGTTATTTTCCATGAAACT +
Preference number: 4 (lower is better)
Translates to: HNMCSHEVAFPLASWRNMVPSRH*VIFHET
Trigger: AGTTTCATGGAAAATAACTCAGTGCCTGCTGGGAAC...CATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTCGTGGCTACACATATTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR TCA 90 bp CTGGTATTTGTAGTCTGCCCGTTGATTTACAAAATGCCTCACTGTGATTGTCGCAATAGAGCAGCTGTGTaGCTGGTTTATCAGCATTCC +
Preference number: 4 (lower is better)
Translates to: LVFVVCPLIYKMPHCDCRNRAAV*LVYQHS
Trigger: GGAATGCTGATAAACCAGTCACACAGCTGCTCTATT...GCGACAATCACAGTGAGGCATTTTGTAAATCAACGGGCAGACTACAAATACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR TCA 90 bp GACTGGTGGTCACTGCTATCACATATCAAAACTTTACACTGCAGATACACAGAGGTTGTTTCTGACGGGTaGTCACTTCAGAAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: DWWSLLSHIKTLHCRYTEVVSDG*SLQKLR
Trigger: CCTCAACTTCTGAAGTGATCACCCGTCAGAAACAAC...CTCTGTGTATCTGCAGTGTAAAGTTTTGATATGTGATAGCAGTGACCACCAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR TCA 90 bp GGCCCTTCCTCATTTATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTTTGGTTGTTTCTGACGGGTaGTCACTTCAGAAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: GPSSFIHNMCSHEVAFPLVVSDG*SLQKLR
Trigger: CCTCAACTTCTGAAGTGATCACCCGTCAGAAACAAC...CAAAGGAAATGCTACCTCGTGGCTACACATATTATGAATAAATGAGGAAGGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR TCA 90 bp CTACAGGTATCAAGAAACACCACCAAATTTGGATCTGAGGTGTGCAGACTAACTGACTACATCCACTCTTaGTTAGGTCGTAGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: LQVSRNTTKFGSEVCRLTDYIHS*LGRRLE
Trigger: CTCCAACCTACGACCTAATCAAGAGTGGATGTAGTC...AGTTAGTCTGCACACCTCAGATCCAAATTTGGTGGTGTTTCTTGATACCTGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR TCA 90 bp CTCACTGTGATTGTCGCTACAGTCACCACATTCAGAGCTAGAACCATGAAGGAAGACGAATGGGTCCTATaGTGGAATCTGTTTTCCATT +
Preference number: 4 (lower is better)
Translates to: LTVIVATVTTFRARTMKEDEWVL*WNLFSI
Trigger: AATGGAAAACAGATTCCATCATAGGACCCATTCGTC...TTCCTTCATGGTTCTAGCTCTGAATGTGGTGACTGTAGCGACAATCACAGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR TCA 90 bp AGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGTTGACGAATGGGTCCTATaGTGGAATCTGTTTTCCATT +
Preference number: 4 (lower is better)
Translates to: SISFGILEKHVSLRVGPVDEWVL*WNLFSI
Trigger: AATGGAAAACAGATTCCATCATAGGACCCATTCGTC...AACAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR TCA 90 bp GCTAGAACCATGAAGGAAAACAGATGCACACTGTTGAAAGGCTGGTTTGGAGTTTTCATGCTGAAATCCTaGATTGCCACTTGCACTTCG +
Preference number: 4 (lower is better)
Translates to: ARTMKENRCTLLKGWFGVFMLKS*IATCTS
Trigger: CGAAGTGCAAGTGGCAATTCAGGATTTCAGCATGAA...AACTCCAAACCAGCCTTTCAACAGTGTGCATCTGTTTTCCTTCATGGTTCTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR TCA 90 bp AGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGTTGCATGTGTTTCATGCTaGAATCCTGAATTGCCACTT +
Preference number: 4 (lower is better)
Translates to: SISFGILEKHVSLRVGPVACVSC*NPELPL
Trigger: AAGTGGCAATTCAGGATTTCAGCATGAAACACATGC...AACAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR TCA 90 bp AAATGCCTCACTGTGATTGTCGCTACAGTCACCACATTCAGAGCTAGAACCATGGCATGTGTTTCATGCTaGAATCCTGAATTGCCACTT +
Preference number: 4 (lower is better)
Translates to: KCLTVIVATVTTFRARTMACVSC*NPELPL
Trigger: AAGTGGCAATTCAGGATTTCAGCATGAAACACATGC...CATGGTTCTAGCTCTGAATGTGGTGACTGTAGCGACAATCACAGTGAGGCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR TCA 90 bp TCAGGCCCTTCCTCATTTATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTCAAAATGCCTCACTGTaGTTGTCGCTACAGTCACCA +
Preference number: 4 (lower is better)
Translates to: SGPSSFIHNMCSHEVAFPQNASL*LSLQSP
Trigger: TGGTGACTGTAGCGACAATCACAGTGAGGCATTTTG...AGGAAATGCTACCTCGTGGCTACACATATTATGAATAAATGAGGAAGGGCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR GCA 90 bp TTTATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTTTGGCATCCTGGAGACCTTTCTTCTGTGCCTaGACATCACAAACAGGTGGC +
Preference number: 4 (lower is better)
Translates to: FIHNMCSHEVAFPLASWRPFFCA*TSQTGG
Trigger: GCCACCTGTTTGTGATGTGCAGGCACAGAAGAAAGG...TCTCCAGGATGCCAAAGGAAATGCTACCTCGTGGCTACACATATTATGAATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp AGCCACGAGGTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTGCTGGTGTTATATTTaGCCAGTGCATTTTGACTTT +
Preference number: 4 (lower is better)
Translates to: SHEVAFPLASWRNMSHLGCWCYI*PVHFDF
Trigger: AAAGTCAAAATGCACTGGGCAAATATAACACCAGCA...CCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTCGTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR GCA 90 bp GGCCCTTCCTCATTTATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTTTGGCTGAAATCCTGAATTaGCACTTGCACTTCGATCCC +
Preference number: 4 (lower is better)
Translates to: GPSSFIHNMCSHEVAFPLAEILN*HLHFDP
Trigger: GGGATCGAAGTGCAAGTGGCAATTCAGGATTTCAGC...CAAAGGAAATGCTACCTCGTGGCTACACATATTATGAATAAATGAGGAAGGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR GCA 90 bp CTACAGGTATCAAGAAACACCACCAAATTTGGATCTGAGGTGTGCAGACTAACTTTTTTACTGCAGACTTaGCCTAGCAGAGGCCCATTG +
Preference number: 4 (lower is better)
Translates to: LQVSRNTTKFGSEVCRLTFLLQT*PSRGPL
Trigger: CAATGGGCCTCTGCTAGGGCAAGTCTGCAGTAAAAA...AGTTAGTCTGCACACCTCAGATCCAAATTTGGTGGTGTTTCTTGATACCTGTAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp CATAATATGTGTAGCCACGAGGTAGCATTTCCTTTGGCATCCTGGAGAAACATGCATAGTCGTTTTTACTaGAGACTTGCCCTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: HNMCSHEVAFPLASWRNMHSRFY*RLALAE
Trigger: CTCTGCTAGGGCAAGTCTGCAGTAAAAACGACTATG...CATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTCGTGGCTACACATATTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CCA 90 bp GCTAGAACCATGAAGGAAAACAGATGCACACTGTTGAAAGGCTGGTTTGGAGTTACACTGTTGAAAGGCTaGTTTGGAGTTTCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: ARTMKENRCTLLKGWFGVTLLKG*FGVSSA
Trigger: TGCGGAAGAAACTCCAAACCAGCCTTTCAACAGTGT...AACTCCAAACCAGCCTTTCAACAGTGTGCATCTGTTTTCCTTCATGGTTCTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
3UTR CAA 72 bp AGAGCTAGAACCATGAAGGAAAACAGATGCACACTGTaGAAAGGCTGGTTTGGAGTTTCTTCCGCATGTGTT +
Preference number: 4 (lower is better)
Translates to: RARTMKENRCTL*KGWFGVSSACV
Trigger: AACACATGCGGAAGAAACTCCAAACCAGCCTTTCAACAGTGTGCATCTGTTTTCCTTCATGGTTCTAGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR TCA 90 bp ATGTCCCATTTCACACTTCACAATAATCTGGAGTTGTTTCTGACGGGTGATCACGTTCCCAGCAGGCACTaGGTTATTTTCCATGAAACT +
Preference number: 4 (lower is better)
Translates to: MSHFTLHNNLELFLTGDHVPSRH*VIFHET
Trigger: AGTTTCATGGAAAATAACTCAGTGCCTGCTGGGAAC...GTGATCACCCGTCAGAAACAACTCCAGATTATTGTGAAGTGTGAAATGGGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR TCA 90 bp CATAATATGTGTAGCCACGAGGTAGCATTTCCTTTGGCATCCTGGAGAAACATGGATCACTTCAGAAGTTaGGGATGCAGAAAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: HNMCSHEVAFPLASWRNMDHFRS*GCRKGD
Trigger: ATCACCTTTTCTGCATCCTCAACTTCTGAAGTGATC...CATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTCGTGGCTACACATATTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR TCA 90 bp AAGTCAGAGGTGGGAGAGGCTCTACAGGTATCAAGAAACACCACCAAATTTGGAGTGTGCAGACTAACTTaGACAAAAAGAGTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: KSEVGEALQVSRNTTKFGVCRLT*TKRVWF
Trigger: GAACCAAACTCTTTTTGTTCAAGTTAGTCTGCACAC...TCCAAATTTGGTGGTGTTTCTTGATACCTGTAGAGCCTCTCCCACCTCTGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR TCA 90 bp TCATTTATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTTTGGCATCCTGGGACTACATCCACTCTTaGTTAGGTCGTAGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: SFIHNMCSHEVAFPLASWDYIHS*LGRRLE
Trigger: CTCCAACCTACGACCTAATCAAGAGTGGATGTAGTC...CCAGGATGCCAAAGGAAATGCTACCTCGTGGCTACACATATTATGAATAAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR TCA 90 bp GCTAGAACCATGAAGGAAAACAGATGCACACTGTTGAAAGGCTGGTTTGGAGTTGACGAATGGGTCCTATaGTGGAATCTGTTTTCCATT +
Preference number: 4 (lower is better)
Translates to: ARTMKENRCTLLKGWFGVDEWVL*WNLFSI
Trigger: AATGGAAAACAGATTCCATCATAGGACCCATTCGTC...AACTCCAAACCAGCCTTTCAACAGTGTGCATCTGTTTTCCTTCATGGTTCTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR TCA 90 bp CGAGGTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGAGAGTCAGTAACTATTTaGAACGTCAATGTACTGGAT +
Preference number: 4 (lower is better)
Translates to: RGSISFGILEKHVSLRVGESVTI*NVNVLD
Trigger: ATCCAGTACATTGACGTTTCAAATAGTTACTGACTC...TCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR TCA 90 bp CGATCCCTTTTCAGACGAATGGGTCCTATGATGGAATCTGTTTTCCATTTATATGGTAATTGGGGCTGGTaGAGGATCCTTCCAAGGTAT +
Preference number: 4 (lower is better)
Translates to: RSLFRRMGPMMESVFHLYGNWGW*RILPRY
Trigger: ATACCTTGGAAGGATCCTTCACCAGCCCCAATTACC...ATATAAATGGAAAACAGATTCCATCATAGGACCCATTCGTCTGAAAAGGGATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp ACTGCTATCACATATCAAAACTTTACACTGCAGATACACAGAGCTCATACTTCTACTGATGGGGAGCTGTaGCTTTCTTCTGTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: TAITYQNFTLQIHRAHTSTDGEL*LSSVPA
Trigger: TGCAGGCACAGAAGAAAGGCACAGCTCCCCATCAGT...AGAAGTATGAGCTCTGTGTATCTGCAGTGTAAAGTTTTGATATGTGATAGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp CGATCCCTTTTCAGACGAATGGGTCCTATGATGGAATCTGTTTTCCATTTATATGTCGTAGGTTGGAGATaGAAAGTCAGAGGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: RSLFRRMGPMMESVFHLYVVGWR*KVRGGR
Trigger: TCTCCCACCTCTGACTTTGCATCTCCAACCTACGAC...ATATAAATGGAAAACAGATTCCATCATAGGACCCATTCGTCTGAAAAGGGATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp AAATGCCTCACTGTGATTGTCGCTACAGTCACCACATTCAGAGCTAGAACCATGGAGACTGGTGGTCACTaGTATCACATATCAAAACTT +
Preference number: 4 (lower is better)
Translates to: KCLTVIVATVTTFRARTMETGGH*YHISKL
Trigger: AAGTTTTGATATGTGATAGCAGTGACCACCAGTCTC...CATGGTTCTAGCTCTGAATGTGGTGACTGTAGCGACAATCACAGTGAGGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp GCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGTTAGAGACTGGTGGTCACTaGTATCACATATCAAAACTT +
Preference number: 4 (lower is better)
Translates to: AFPLASWRNMSHLGLDLLETGGH*YHISKL
Trigger: AAGTTTTGATATGTGATAGCAGTGACCACCAGTCTC...TAACAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR GCA 90 bp GCTACAGTCACCACATTCAGAGCTAGAACCATGAAGGAAAACAGATGCACACTGAAGAAATGTCTCGTTTaGTTCTGGAGACACAACCTT +
Preference number: 4 (lower is better)
Translates to: ATVTTFRARTMKENRCTLKKCLV*FWRHNL
Trigger: AAGGTTGTGTCTCCAGAAGCAAACGAGACATTTCTT...CAGTGTGCATCTGTTTTCCTTCATGGTTCTAGCTCTGAATGTGGTGACTGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp GCTAGAACCATGAAGGAAAACAGATGCACACTGTTGAAAGGCTGGTTTGGAGTTATGAAGGAAAACAGATaGACACTGTTGAAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: ARTMKENRCTLLKGWFGVMKENR*TLLKGW
Trigger: CCAGCCTTTCAACAGTGTGCATCTGTTTTCCTTCAT...AACTCCAAACCAGCCTTTCAACAGTGTGCATCTGTTTTCCTTCATGGTTCTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp CGAGGTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACTGGTATTTGTAGTCTaGCCGTTGATTTACAAAATG +
Preference number: 4 (lower is better)
Translates to: RGSISFGILEKHVSLRVGLVFVV*PLIYKM
Trigger: CATTTTGTAAATCAACGGGCAGACTACAAATACCAG...TCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR GCA 90 bp CACGAGGTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGCTGGTATTTGTAGTCTaGCCGTTGATTTACAAAATG +
Preference number: 4 (lower is better)
Translates to: HEVAFPLASWRNMSHLGLLVFVV*PLIYKM
Trigger: CATTTTGTAAATCAACGGGCAGACTACAAATACCAG...CAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTCGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR GCA 90 bp CACGAGGTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGTTGGGTCTTTTAGTTaGAAGTTATTCCCATTAGAG +
Preference number: 4 (lower is better)
Translates to: HEVAFPLASWRNMSHLGLVGSFS*KLFPLE
Trigger: CTCTAATGGGAATAACTTGCAACTAAAAGACCCAAC...CAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTCGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CCA 90 bp TCAGGCCCTTCCTCATTTATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTTGTCTCGTTTGCTTCTaGAGACACAACCTTGATTGC +
Preference number: 4 (lower is better)
Translates to: SGPSSFIHNMCSHEVAFPCLVCF*RHNLDC
Trigger: GCAATCAAGGTTGTGTCTCCAGAAGCAAACGAGACA...AGGAAATGCTACCTCGTGGCTACACATATTATGAATAAATGAGGAAGGGCCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CCA 90 bp GCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGTTATTTCCTTTGGCATCCTaGAGAAACATGTCTCACTTA +
Preference number: 4 (lower is better)
Translates to: AFPLASWRNMSHLGLDLLFPLAS*RNMSHL
Trigger: TAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAA...TAACAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR TCA 90 bp CTCACTGTGATTGTCGCTACAGTCACCACATTCAGAGCTAGAACCATGAAGGAAATTGGTGTAAGTAATTaGCTGATCTTCTACCTTCAG +
Preference number: 4 (lower is better)
Translates to: LTVIVATVTTFRARTMKEIGVSN*LIFYLQ
Trigger: CTGAAGGTAGAAGATCAGTCAATTACTTACACCAAT...TTCCTTCATGGTTCTAGCTCTGAATGTGGTGACTGTAGCGACAATCACAGTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338948.3
CDS-3UTR TCA 90 bp ACCATGAAGGAAAACAGATGCACACTGTTGAAAGGCTGGTTTGGAGTTTCTTCCGTGTGCAGACTAACTTaGACAAAAAGAGTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: TMKENRCTLLKGWFGVSSVCRLT*TKRVWF
Trigger: GAACCAAACTCTTTTTGTTCAAGTTAGTCTGCACAC...GGAAGAAACTCCAAACCAGCCTTTCAACAGTGTGCATCTGTTTTCCTTCATGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR TCA 90 bp AAATGCCTCACTGTGATTGTCGCTACAGTCACCACATTCAGAGCTAGAACCATGGTTTTCTGCATAAATTaGGGTGTAGGAAGCAGAAAA +
Preference number: 4 (lower is better)
Translates to: KCLTVIVATVTTFRARTMVFCIN*GVGSRK
Trigger: TTTTCTGCTTCCTACACCTCAATTTATGCAGAAAAC...CATGGTTCTAGCTCTGAATGTGGTGACTGTAGCGACAATCACAGTGAGGCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp AAGTCAGAGGTGGGAGAGGCTCTACAGGTATCAAGAAACACCACCAAATTTGGATGCTGGTGTTATATTTaGCCAGTGCATTTTGACTTT +
Preference number: 4 (lower is better)
Translates to: KSEVGEALQVSRNTTKFGCWCYI*PVHFDF
Trigger: AAAGTCAAAATGCACTGGGCAAATATAACACCAGCA...TCCAAATTTGGTGGTGTTTCTTGATACCTGTAGAGCCTCTCCCACCTCTGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp GCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGTTAATTCAAAAAGAGCCATaGTGGTGTTATATTTGCCCA +
Preference number: 4 (lower is better)
Translates to: AFPLASWRNMSHLGLDLLIQKEP*WCYICP
Trigger: TGGGCAAATATAACACCAGCATGGCTCTTTTTGAAT...TAACAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR GCA 90 bp GTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGATCAAAACTTTACACTaGAGATACACAGAGCTCATA +
Preference number: 4 (lower is better)
Translates to: VAFPLASWRNMSHLGLDLIKTLH*RYTELI
Trigger: TATGAGCTCTGTGTATCTGCAGTGTAAAGTTTTGAT...CAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CCA 90 bp TCCTCATTTATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTTTGGCATCCTGTCTCGTTTGCTTCTaGAGACACAACCTTGATTGC +
Preference number: 4 (lower is better)
Translates to: SSFIHNMCSHEVAFPLASCLVCF*RHNLDC
Trigger: GCAATCAAGGTTGTGTCTCCAGAAGCAAACGAGACA...GGATGCCAAAGGAAATGCTACCTCGTGGCTACACATATTATGAATAAATGAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CCA 90 bp TCATTTATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTTTGGCATCCTGGGTTGAAAGGCTGGTTTaGAGTTTCTTCCGCATGTGT +
Preference number: 4 (lower is better)
Translates to: SFIHNMCSHEVAFPLASWVERLV*SFFRMC
Trigger: ACACATGCGGAAGAAACTCCAAACCAGCCTTTCAAC...CCAGGATGCCAAAGGAAATGCTACCTCGTGGCTACACATATTATGAATAAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CCA 90 bp TTGCAGCGAGACTGGTGGTCACTGCTATCACATATCAAAACTTTACACTGCAGATTTCCTTTGGCATCCTaGAGAAACATGTCTCACTTA +
Preference number: 4 (lower is better)
Translates to: LQRDWWSLLSHIKTLHCRFPLAS*RNMSHL
Trigger: TAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAA...TCTGCAGTGTAAAGTTTTGATATGTGATAGCAGTGACCACCAGTCTCGCTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR TCA 90 bp TCCTCATTTATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTTTGGCATCCGATCACTTCAGAAGTTaGGGATGCAGAAAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: SSFIHNMCSHEVAFPLASDHFRS*GCRKGD
Trigger: ATCACCTTTTCTGCATCCTCAACTTCTGAAGTGATC...GGATGCCAAAGGAAATGCTACCTCGTGGCTACACATATTATGAATAAATGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR TCA 90 bp CACTGCTATCACATATCAAAACTTTACACTGCAGATACACAGAGCTCATACTTCATCTGGAGTTGTTTCTaGCGGGTGATCACTTCAGAA +
Preference number: 4 (lower is better)
Translates to: HCYHISKLYTADTQSSYFIWSCF*RVITSE
Trigger: TTCTGAAGTGATCACCCGTCAGAAACAACTCCAGAT...GAAGTATGAGCTCTGTGTATCTGCAGTGTAAAGTTTTGATATGTGATAGCAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR TCA 90 bp GGCCCTTCCTCATTTATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTTTGGTGTGCAGACTAACTTaGACAAAAAGAGTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: GPSSFIHNMCSHEVAFPLVCRLT*TKRVWF
Trigger: GAACCAAACTCTTTTTGTTCAAGTTAGTCTGCACAC...CAAAGGAAATGCTACCTCGTGGCTACACATATTATGAATAAATGAGGAAGGGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR TCA 90 bp TTTATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTTTGGCATCCTGGAGAGCATGTGTTTCATGCTaGAATCCTGAATTGCCACTT +
Preference number: 4 (lower is better)
Translates to: FIHNMCSHEVAFPLASWRACVSC*NPELPL
Trigger: AAGTGGCAATTCAGGATTTCAGCATGAAACACATGC...TCTCCAGGATGCCAAAGGAAATGCTACCTCGTGGCTACACATATTATGAATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR TCA 90 bp CGATCCCTTTTCAGACGAATGGGTCCTATGATGGAATCTGTTTTCCATTTATATTCAGAGCTAGAACCATaGAGGAAAACAGATGCACAC +
Preference number: 4 (lower is better)
Translates to: RSLFRRMGPMMESVFHLYSELEP*RKTDAH
Trigger: GTGTGCATCTGTTTTCCTTCATGGTTCTAGCTCTGA...ATATAAATGGAAAACAGATTCCATCATAGGACCCATTCGTCTGAAAAGGGATCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR TCA 90 bp CACTGTAGAATTATGTCCCATTTCACACTTCACAATAATCTGGAGTTGTTTCTGCAAAATGCCTCACTGTaGTTGTCGCTACAGTCACCA +
Preference number: 4 (lower is better)
Translates to: HCRIMSHFTLHNNLELFLQNASL*LSLQSP
Trigger: TGGTGACTGTAGCGACAATCACAGTGAGGCATTTTG...CAGAAACAACTCCAGATTATTGTGAAGTGTGAAATGGGACATAATTCTACAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR TCA 90 bp ACCATGAAGGAAAACAGATGCACACTGTTGAAAGGCTGGTTTGGAGTTTCTTCCGAGTCAGTAACTATTTaGAACGTCAATGTACTGGAT +
Preference number: 4 (lower is better)
Translates to: TMKENRCTLLKGWFGVSSESVTI*NVNVLD
Trigger: ATCCAGTACATTGACGTTTCAAATAGTTACTGACTC...GGAAGAAACTCCAAACCAGCCTTTCAACAGTGTGCATCTGTTTTCCTTCATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp ACCATGAAGGAAAACAGATGCACACTGTTGAAAGGCTGGTTTGGAGTTTCTTCCTGCTGGTGTTATATTTaGCCAGTGCATTTTGACTTT +
Preference number: 4 (lower is better)
Translates to: TMKENRCTLLKGWFGVSSCWCYI*PVHFDF
Trigger: AAAGTCAAAATGCACTGGGCAAATATAACACCAGCA...GGAAGAAACTCCAAACCAGCCTTTCAACAGTGTGCATCTGTTTTCCTTCATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp CTGGTATTTGTAGTCTGCCCGTTGATTTACAAAATGCCTCACTGTGATTGTCGCTGCTGGTGTTATATTTaGCCAGTGCATTTTGACTTT +
Preference number: 4 (lower is better)
Translates to: LVFVVCPLIYKMPHCDCRCWCYI*PVHFDF
Trigger: AAAGTCAAAATGCACTGGGCAAATATAACACCAGCA...GCGACAATCACAGTGAGGCATTTTGTAAATCAACGGGCAGACTACAAATACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp ACAACCTTGATTGCAGCGAGACTGGTGGTCACTGCTATCACATATCAAAACTTTGAGACTGGTGGTCACTaGTATCACATATCAAAACTT +
Preference number: 4 (lower is better)
Translates to: TTLIAARLVVTAITYQNFETGGH*YHISKL
Trigger: AAGTTTTGATATGTGATAGCAGTGACCACCAGTCTC...AAAGTTTTGATATGTGATAGCAGTGACCACCAGTCTCGCTGCAATCAAGGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp TCAGGCCCTTCCTCATTTATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTAAGAAATGTCTCGTTTaGTTCTGGAGACACAACCTT +
Preference number: 4 (lower is better)
Translates to: SGPSSFIHNMCSHEVAFPKKCLV*FWRHNL
Trigger: AAGGTTGTGTCTCCAGAAGCAAACGAGACATTTCTT...AGGAAATGCTACCTCGTGGCTACACATATTATGAATAAATGAGGAAGGGCCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR GCA 90 bp TCTGTTTTCCATTTATATGAAGAAATGTCTCGTTTGCTTCTGGAGACACAACCTGCTGAAATCCTGAATTaGCACTTGCACTTCGATCCC +
Preference number: 4 (lower is better)
Translates to: SVFHLYEEMSRLLLETQPAEILN*HLHFDP
Trigger: GGGATCGAAGTGCAAGTGGCAATTCAGGATTTCAGC...AGGTTGTGTCTCCAGAAGCAAACGAGACATTTCTTCATATAAATGGAAAACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp ACTGCTATCACATATCAAAACTTTACACTGCAGATACACAGAGCTCATACTTCTGCTGAAATCCTGAATTaGCACTTGCACTTCGATCCC +
Preference number: 4 (lower is better)
Translates to: TAITYQNFTLQIHRAHTSAEILN*HLHFDP
Trigger: GGGATCGAAGTGCAAGTGGCAATTCAGGATTTCAGC...AGAAGTATGAGCTCTGTGTATCTGCAGTGTAAAGTTTTGATATGTGATAGCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp TCCTCATTTATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTTTGGCATCCATGAAGGAAAACAGATaGACACTGTTGAAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SSFIHNMCSHEVAFPLASMKENR*TLLKGW
Trigger: CCAGCCTTTCAACAGTGTGCATCTGTTTTCCTTCAT...GGATGCCAAAGGAAATGCTACCTCGTGGCTACACATATTATGAATAAATGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR GCA 90 bp TTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGTTAGTTGTTGGGTCTTTTAGTTaGAAGTTATTCCCATTAGAG +
Preference number: 4 (lower is better)
Translates to: FPLASWRNMSHLGLDLLVVGSFS*KLFPLE
Trigger: CTCTAATGGGAATAACTTGCAACTAAAAGACCCAAC...AACTAACAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp TTGCAGCGAGACTGGTGGTCACTGCTATCACATATCAAAACTTTACACTGCAGAGTTGGGTCTTTTAGTTaGAAGTTATTCCCATTAGAG +
Preference number: 4 (lower is better)
Translates to: LQRDWWSLLSHIKTLHCRVGSFS*KLFPLE
Trigger: CTCTAATGGGAATAACTTGCAACTAAAAGACCCAAC...TCTGCAGTGTAAAGTTTTGATATGTGATAGCAGTGACCACCAGTCTCGCTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CCA 90 bp TCAGGCCCTTCCTCATTTATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTTTTCCTTTGGCATCCTaGAGAAACATGTCTCACTTA +
Preference number: 4 (lower is better)
Translates to: SGPSSFIHNMCSHEVAFPFPLAS*RNMSHL
Trigger: TAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAA...AGGAAATGCTACCTCGTGGCTACACATATTATGAATAAATGAGGAAGGGCCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CCA 90 bp GCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGTTAGAAACGTCAATGTACTaGATGATGATTCAAATACAG +
Preference number: 4 (lower is better)
Translates to: AFPLASWRNMSHLGLDLLETSMY*MMIQIQ
Trigger: CTGTATTTGAATCATCATCCAGTACATTGACGTTTC...TAACAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CCA 90 bp TCCTCATTTATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTTTGGCATCCGTAACCGCCACAGTTTaGAATAGAGATGTTAGGAGA +
Preference number: 4 (lower is better)
Translates to: SSFIHNMCSHEVAFPLASVTATV*NRDVRR
Trigger: TCTCCTAACATCTCTATTCCAAACTGTGGCGGTTAC...GGATGCCAAAGGAAATGCTACCTCGTGGCTACACATATTATGAATAAATGAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR TCA 90 bp TCTGTTTTCCATTTATATGAAGAAATGTCTCGTTTGCTTCTGGAGACACAACCTAATAGAGCAGCTGTGTaGCTGGTTTATCAGCATTCC +
Preference number: 4 (lower is better)
Translates to: SVFHLYEEMSRLLLETQPNRAAV*LVYQHS
Trigger: GGAATGCTGATAAACCAGTCACACAGCTGCTCTATT...AGGTTGTGTCTCCAGAAGCAAACGAGACATTTCTTCATATAAATGGAAAACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR TCA 90 bp CACTGTAGAATTATGTCCCATTTCACACTTCACAATAATCTGGAGTTGTTTCTGCACCAAATTTGGATCTaGGGTGTGCAGACTAACTTG +
Preference number: 4 (lower is better)
Translates to: HCRIMSHFTLHNNLELFLHQIWI*GVQTNL
Trigger: CAAGTTAGTCTGCACACCTCAGATCCAAATTTGGTG...CAGAAACAACTCCAGATTATTGTGAAGTGTGAAATGGGACATAATTCTACAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR TCA 90 bp CGATCCCTTTTCAGACGAATGGGTCCTATGATGGAATCTGTTTTCCATTTATATGACGAATGGGTCCTATaGTGGAATCTGTTTTCCATT +
Preference number: 4 (lower is better)
Translates to: RSLFRRMGPMMESVFHLYDEWVL*WNLFSI
Trigger: AATGGAAAACAGATTCCATCATAGGACCCATTCGTC...ATATAAATGGAAAACAGATTCCATCATAGGACCCATTCGTCTGAAAAGGGATCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR TCA 90 bp GACTGGTGGTCACTGCTATCACATATCAAAACTTTACACTGCAGATACACAGAGGAGTCAGTAACTATTTaGAACGTCAATGTACTGGAT +
Preference number: 4 (lower is better)
Translates to: DWWSLLSHIKTLHCRYTEESVTI*NVNVLD
Trigger: ATCCAGTACATTGACGTTTCAAATAGTTACTGACTC...CTCTGTGTATCTGCAGTGTAAAGTTTTGATATGTGATAGCAGTGACCACCAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
CDS-3UTR TCA 90 bp GGCCCTTCCTCATTTATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTTTGGTTTTCTGCATAAATTaGGGTGTAGGAAGCAGAAAA +
Preference number: 4 (lower is better)
Translates to: GPSSFIHNMCSHEVAFPLVFCIN*GVGSRK
Trigger: TTTTCTGCTTCCTACACCTCAATTTATGCAGAAAAC...CAAAGGAAATGCTACCTCGTGGCTACACATATTATGAATAAATGAGGAAGGGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR TCA 90 bp TCAGGCCCTTCCTCATTTATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTGTTTTCTGCATAAATTaGGGTGTAGGAAGCAGAAAA +
Preference number: 4 (lower is better)
Translates to: SGPSSFIHNMCSHEVAFPVFCIN*GVGSRK
Trigger: TTTTCTGCTTCCTACACCTCAATTTATGCAGAAAAC...AGGAAATGCTACCTCGTGGCTACACATATTATGAATAAATGAGGAAGGGCCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR GCA 90 bp CTACAGGTATCAAGAAACACCACCAAATTTGGATCTGAGGTGTGCAGACTAACTATTCAAAAAGAGCCATaGTGGTGTTATATTTGCCCA +
Preference number: 4 (lower is better)
Translates to: LQVSRNTTKFGSEVCRLTIQKEP*WCYICP
Trigger: TGGGCAAATATAACACCAGCATGGCTCTTTTTGAAT...AGTTAGTCTGCACACCTCAGATCCAAATTTGGTGGTGTTTCTTGATACCTGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp TTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGTTAGTTATCAAAACTTTACACTaGAGATACACAGAGCTCATA +
Preference number: 4 (lower is better)
Translates to: FPLASWRNMSHLGLDLLVIKTLH*RYTELI
Trigger: TATGAGCTCTGTGTATCTGCAGTGTAAAGTTTTGAT...AACTAACAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp TTTATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTTTGGCATCCTGGAGAAAGAAATGTCTCGTTTaGTTCTGGAGACACAACCTT +
Preference number: 4 (lower is better)
Translates to: FIHNMCSHEVAFPLASWRKKCLV*FWRHNL
Trigger: AAGGTTGTGTCTCCAGAAGCAAACGAGACATTTCTT...TCTCCAGGATGCCAAAGGAAATGCTACCTCGTGGCTACACATATTATGAATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR GCA 90 bp TCAGGCCCTTCCTCATTTATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTCTGGTATTTGTAGTCTaGCCGTTGATTTACAAAATG +
Preference number: 4 (lower is better)
Translates to: SGPSSFIHNMCSHEVAFPLVFVV*PLIYKM
Trigger: CATTTTGTAAATCAACGGGCAGACTACAAATACCAG...AGGAAATGCTACCTCGTGGCTACACATATTATGAATAAATGAGGAAGGGCCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CCA 90 bp AATCTGTTTTCCATTTATATGAAGAAATGTCTCGTTTGCTTCTGGAGACACAACATGCAAAGTCAGAGGTaGGAGAGGCTCTACAGGTAT +
Preference number: 4 (lower is better)
Translates to: NLFSIYMKKCLVCFWRHNMQSQR*ERLYRY
Trigger: ATACCTGTAGAGCCTCTCCCACCTCTGACTTTGCAT...GTTGTGTCTCCAGAAGCAAACGAGACATTTCTTCATATAAATGGAAAACAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CCA 90 bp AAGGCTGGTTTGGAGTTTCTTCCGCATGTGTTTCATGCTGAAATCCTGAATTGCGAAACGTCAATGTACTaGATGATGATTCAAATACAG +
Preference number: 4 (lower is better)
Translates to: KAGLEFLPHVFHAEILNCETSMY*MMIQIQ
Trigger: CTGTATTTGAATCATCATCCAGTACATTGACGTTTC...GCAATTCAGGATTTCAGCATGAAACACATGCGGAAGAAACTCCAAACCAGCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CCA 90 bp ATTGTCGCTACAGTCACCACATTCAGAGCTAGAACCATGAAGGAAAACAGATGCGAAACGTCAATGTACTaGATGATGATTCAAATACAG +
Preference number: 4 (lower is better)
Translates to: IVATVTTFRARTMKENRCETSMY*MMIQIQ
Trigger: CTGTATTTGAATCATCATCCAGTACATTGACGTTTC...GCATCTGTTTTCCTTCATGGTTCTAGCTCTGAATGTGGTGACTGTAGCGACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
CDS-3UTR TCA 90 bp TTTTCAAATGAATTGGATTCAAAAAGAGCCATGCTGGTGTTATATTTGCCCAGTTCAGAGCTAGAACCATaGAGGAAAACAGATGCACAC +
Preference number: 4 (lower is better)
Translates to: FSNELDSKRAMLVLYLPSSELEP*RKTDAH
Trigger: GTGTGCATCTGTTTTCCTTCATGGTTCTAGCTCTGA...ACTGGGCAAATATAACACCAGCATGGCTCTTTTTGAATCCAATTCATTTGAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp GACTGGTGGTCACTGCTATCACATATCAAAACTTTACACTGCAGATACACAGAGATCAAAACTTTACACTaGAGATACACAGAGCTCATA +
Preference number: 4 (lower is better)
Translates to: DWWSLLSHIKTLHCRYTEIKTLH*RYTELI
Trigger: TATGAGCTCTGTGTATCTGCAGTGTAAAGTTTTGAT...CTCTGTGTATCTGCAGTGTAAAGTTTTGATATGTGATAGCAGTGACCACCAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp CGATCCCTTTTCAGACGAATGGGTCCTATGATGGAATCTGTTTTCCATTTATATGAGACTGGTGGTCACTaGTATCACATATCAAAACTT +
Preference number: 4 (lower is better)
Translates to: RSLFRRMGPMMESVFHLYETGGH*YHISKL
Trigger: AAGTTTTGATATGTGATAGCAGTGACCACCAGTCTC...ATATAAATGGAAAACAGATTCCATCATAGGACCCATTCGTCTGAAAAGGGATCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR GCA 90 bp TTTTCAAATGAATTGGATTCAAAAAGAGCCATGCTGGTGTTATATTTGCCCAGTCATAGTCGTTTTTACTaGAGACTTGCCCTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: FSNELDSKRAMLVLYLPSHSRFY*RLALAE
Trigger: CTCTGCTAGGGCAAGTCTGCAGTAAAAACGACTATG...ACTGGGCAAATATAACACCAGCATGGCTCTTTTTGAATCCAATTCATTTGAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CCA 90 bp TTTTCAAATGAATTGGATTCAAAAAGAGCCATGCTGGTGTTATATTTGCCCAGTGTAACCGCCACAGTTTaGAATAGAGATGTTAGGAGA +
Preference number: 4 (lower is better)
Translates to: FSNELDSKRAMLVLYLPSVTATV*NRDVRR
Trigger: TCTCCTAACATCTCTATTCCAAACTGTGGCGGTTAC...ACTGGGCAAATATAACACCAGCATGGCTCTTTTTGAATCCAATTCATTTGAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CCA 90 bp TCATTTATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTTTGGCATCCTGGATCCCCGGTAAGAATTaGCATAATAAAATCTCTTTG +
Preference number: 4 (lower is better)
Translates to: SFIHNMCSHEVAFPLASWIPGKN*HNKISL
Trigger: CAAAGAGATTTTATTATGCCAATTCTTACCGGGGAT...CCAGGATGCCAAAGGAAATGCTACCTCGTGGCTACACATATTATGAATAAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368900.5
CDS-3UTR GCA 90 bp AATCTGTTTTCCATTTATATGAAGAAATGTCTCGTTTGCTTCTGGAGACACAACATTCAAAAAGAGCCATaGTGGTGTTATATTTGCCCA +
Preference number: 4 (lower is better)
Translates to: NLFSIYMKKCLVCFWRHNIQKEP*WCYICP
Trigger: TGGGCAAATATAACACCAGCATGGCTCTTTTTGAAT...GTTGTGTCTCCAGAAGCAAACGAGACATTTCTTCATATAAATGGAAAACAGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS CCA 90 bp CAGGTGCAGTTCTCACTGGGATTGAGTTGCAGGATCATGGCTTTGTaGGTCTCTGCCATATTGGCACCCCCTAGACTGACTGTGCAGCTT +
Preference number: 5 (lower is better)
Translates to: QVQFSLGLSCRIMAL*VSAILAPPRLTVQL
Trigger: AAGCTGCACAGTCAGTCTAGGGGGTGCCAATATGGCAGAGACCCACAAAGCCATGATCCTGCAACTCAATCCCAGTGAGAACTGCACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392790.6
CDS-3UTR CAA 90 bp CGAGGTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACTTCAGCCTCCGCCATaGTCAGCTCCGCCAAACAGG +
Preference number: 5 (lower is better)
Translates to: RGSISFGILEKHVSLRVGLQPPP*SAPPNR
Trigger: CCTGTTTGGCGGAGCTGACAATGGCGGAGGCTGAAG...TCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS GCA 90 bp TCTGGTCTTTCTATTGTCCAGGTGCAGTTCTCACTGGGATTGAGTTaGAGGATCATGGCTTTGTGGGTCTCTGCCATATTGGCACCCCCT +
Preference number: 5 (lower is better)
Translates to: SGLSIVQVQFSLGLS*RIMALWVSAILAPP
Trigger: AGGGGGTGCCAATATGGCAGAGACCCACAAAGCCATGATCCTGCAACTCAATCCCAGTGAGAACTGCACCTGGACAATAGAAAGACCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392790.6
CDS-3UTR CAA 90 bp CTGCAGCTTCTGGTATTTGTAGTCTGCCCGTTGATTTACAAAATGCCTCACTGTCTTCAGCCTCCGCCATaGTCAGCTCCGCCAAACAGG +
Preference number: 5 (lower is better)
Translates to: LQLLVFVVCPLIYKMPHCLQPPP*SAPPNR
Trigger: CCTGTTTGGCGGAGCTGACAATGGCGGAGGCTGAAG...ACAGTGAGGCATTTTGTAAATCAACGGGCAGACTACAAATACCAGAAGCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CAA 90 bp TTGCAGCGAGACTGGTGGTCACTGCTATCACATATCAAAACTTTACACTGCAGACTTCAGCCTCCGCCATaGTCAGCTCCGCCAAACAGG +
Preference number: 5 (lower is better)
Translates to: LQRDWWSLLSHIKTLHCRLQPPP*SAPPNR
Trigger: CCTGTTTGGCGGAGCTGACAATGGCGGAGGCTGAAG...TCTGCAGTGTAAAGTTTTGATATGTGATAGCAGTGACCACCAGTCTCGCTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CAA 90 bp TGGAGATGCAAAGTCAGAGGTGGGAGAGGCTCTACAGGTATCAAGAAACACCACTCTGGAGACACAACCTaGATTGCAGCGAGACTGGTG +
Preference number: 5 (lower is better)
Translates to: WRCKVRGGRGSTGIKKHHSGDTT*IAARLV
Trigger: CACCAGTCTCGCTGCAATCAAGGTTGTGTCTCCAGA...GTGGTGTTTCTTGATACCTGTAGAGCCTCTCCCACCTCTGACTTTGCATCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CAA 90 bp AGGATGCGGCTTTGGGTAATTGGGGCTGGTGAAGGATCCTTCCAAGGTATCCAGGAGGTAGCATTTCCTTaGGCATCCTGGAGAAACATG +
Preference number: 5 (lower is better)
Translates to: RMRLWVIGAGEGSFQGIQEVAFP*ASWRNM
Trigger: CATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTC...CTGGATACCTTGGAAGGATCCTTCACCAGCCCCAATTACCCAAAGCCGCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CAA 90 bp CACGAGGTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGTGGGTCTCTGCCATATaGGCACCCCCTAGACTGACT +
Preference number: 5 (lower is better)
Translates to: HEVAFPLASWRNMSHLGLWVSAI*APPRLT
Trigger: AGTCAGTCTAGGGGGTGCCAATATGGCAGAGACCCA...CAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392790.6
CDS-3UTR CAA 90 bp CCGTTGATTTACAAAATGCCTCACTGTGATTGTCGCTACAGTCACCACATTCAGCCTAGCAGAGGCCCATaGCTGGAGGTTCCGTCAAAG +
Preference number: 5 (lower is better)
Translates to: PLIYKMPHCDCRYSHHIQPSRGP*LEVPSK
Trigger: CTTTGACGGAACCTCCAGCAATGGGCCTCTGCTAGG...CTGAATGTGGTGACTGTAGCGACAATCACAGTGAGGCATTTTGTAAATCAACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CAA 90 bp TGCAAAGTCAGAGGTGGGAGAGGCTCTACAGGTATCAAGAAACACCACCAAATTCACACGGCCACAGACTaGTCCAATCAGGCCAGAGTT +
Preference number: 5 (lower is better)
Translates to: CKVRGGRGSTGIKKHHQIHTATD*SNQARV
Trigger: AACTCTGGCCTGATTGGACAAGTCTGTGGCCGTGTG...AATTTGGTGGTGTTTCTTGATACCTGTAGAGCCTCTCCCACCTCTGACTTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368901.5
CDS-3UTR CAA 90 bp AGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGTTCACACGGCCACAGACTaGTCCAATCAGGCCAGAGTT +
Preference number: 5 (lower is better)
Translates to: SISFGILEKHVSLRVGPVHTATD*SNQARV
Trigger: AACTCTGGCCTGATTGGACAAGTCTGTGGCCGTGTG...AACAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CAA 90 bp AGCCACGAGGTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGCGACAGTCAGAGAGTTaGATGACGATTCGAAGGTGG +
Preference number: 5 (lower is better)
Translates to: SHEVAFPLASWRNMSHLGRQSES*MTIRRW
Trigger: CCACCTTCGAATCGTCATCAAACTCTCTGACTGTCG...CCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTCGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CAA 90 bp TGGGAGAGGCTCTACAGGTATCAAGAAACACCACCAAATTTGGATCTGAGGTGTTCTGGAGACACAACCTaGATTGCAGCGAGACTGGTG +
Preference number: 5 (lower is better)
Translates to: WERLYRYQETPPNLDLRCSGDTT*IAARLV
Trigger: CACCAGTCTCGCTGCAATCAAGGTTGTGTCTCCAGA...ACACCTCAGATCCAAATTTGGTGGTGTTTCTTGATACCTGTAGAGCCTCTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CAA 90 bp TGCTTCTGGAGACACAACCTTGATTGCAGCGAGACTGGTGGTCACTGCTATCACAACAGATGCACACTGTaGAAAGGCTGGTTTGGAGTT +
Preference number: 5 (lower is better)
Translates to: CFWRHNLDCSETGGHCYHNRCTL*KGWFGV
Trigger: AACTCCAAACCAGCCTTTCAACAGTGTGCATCTGTT...GTGATAGCAGTGACCACCAGTCTCGCTGCAATCAAGGTTGTGTCTCCAGAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CAA 90 bp CGAGGTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACGACAGTCAGAGAGTTaGATGACGATTCGAAGGTGG +
Preference number: 5 (lower is better)
Translates to: RGSISFGILEKHVSLRVGRQSES*MTIRRW
Trigger: CCACCTTCGAATCGTCATCAAACTCTCTGACTGTCG...TCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CAA 90 bp CGAGGTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGATGCAGGATCATGGCTTaGTGGGTCTCTGCCATATTG +
Preference number: 5 (lower is better)
Translates to: RGSISFGILEKHVSLRVGCRIMA*WVSAIL
Trigger: CAATATGGCAGAGACCCACAAAGCCATGATCCTGCA...TCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392790.6
CDS TCA 90 bp TGTTTTCTGGTCTTTCTATTGTCCAGGTGCAGTTCTCACTGGGATTaGGTTGCAGGATCATGGCTTTGTGGGTCTCTGCCATATTGGCAC +
Preference number: 5 (lower is better)
Translates to: CFLVFLLSRCSSHWD*VAGSWLCGSLPYWH
Trigger: GTGCCAATATGGCAGAGACCCACAAAGCCATGATCCTGCAACTCAATCCCAGTGAGAACTGCACCTGGACAATAGAAAGACCAGAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392790.6
CDS-3UTR CAA 90 bp CGATCCCTTTTCAGACGAATGGGTCCTATGATGGAATCTGTTTTCCATTTATATCTTCAGCCTCCGCCATaGTCAGCTCCGCCAAACAGG +
Preference number: 5 (lower is better)
Translates to: RSLFRRMGPMMESVFHLYLQPPP*SAPPNR
Trigger: CCTGTTTGGCGGAGCTGACAATGGCGGAGGCTGAAG...ATATAAATGGAAAACAGATTCCATCATAGGACCCATTCGTCTGAAAAGGGATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CAA 90 bp GTATGTGCCACACACAATAAGCCAGCTCAGGATGCGGCTTTGGGTAATTGGGGCGGTGTGCAGACTAACTaGAACAAAAAGAGTTTGGTT +
Preference number: 5 (lower is better)
Translates to: VCATHNKPAQDAALGNWGGVQTN*NKKSLV
Trigger: AACCAAACTCTTTTTGTTCAAGTTAGTCTGCACACC...GCCCCAATTACCCAAAGCCGCATCCTGAGCTGGCTTATTGTGTGTGGCACATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CAA 90 bp GTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGGAAACACCACCAAATTaGGATCTGAGGTGTGCAGAC +
Preference number: 5 (lower is better)
Translates to: VAFPLASWRNMSHLGLDLETPPN*DLRCAD
Trigger: GTCTGCACACCTCAGATCCAAATTTGGTGGTGTTTC...CAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CAA 90 bp CGAGGTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGAGAAACACCACCAAATTaGGATCTGAGGTGTGCAGAC +
Preference number: 5 (lower is better)
Translates to: RGSISFGILEKHVSLRVGETPPN*DLRCAD
Trigger: GTCTGCACACCTCAGATCCAAATTTGGTGGTGTTTC...TCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CAA 90 bp CTGCAGCTTCTGGTATTTGTAGTCTGCCCGTTGATTTACAAAATGCCTCACTGTTCTGGAGACACAACCTaGATTGCAGCGAGACTGGTG +
Preference number: 5 (lower is better)
Translates to: LQLLVFVVCPLIYKMPHCSGDTT*IAARLV
Trigger: CACCAGTCTCGCTGCAATCAAGGTTGTGTCTCCAGA...ACAGTGAGGCATTTTGTAAATCAACGGGCAGACTACAAATACCAGAAGCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CAA 90 bp GGTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGAGGTAGCATTTCCTTaGGCATCCTGGAGAAACATG +
Preference number: 5 (lower is better)
Translates to: GSISFGILEKHVSLRVGPEVAFP*ASWRNM
Trigger: CATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTC...AGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CAA 90 bp TCATTTATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTTTGGCATCCTGGCCTAGCAGAGGCCCATaGCTGGAGGTTCCGTCAAAG +
Preference number: 5 (lower is better)
Translates to: SFIHNMCSHEVAFPLASWPSRGP*LEVPSK
Trigger: CTTTGACGGAACCTCCAGCAATGGGCCTCTGCTAGG...CCAGGATGCCAAAGGAAATGCTACCTCGTGGCTACACATATTATGAATAAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS GCA 90 bp TGCTGTAACATGTGTTGCATCTGGAGAGACTCCCATTACCTGAATTaGGCCATAGAAAATAAAGTCACACCCTCCCTTGAAGGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: CCNMCCIWRDSHYLN*AIENKVTPSLEGSS
Trigger: GGAAGAGCCTTCAAGGGAGGGTGTGACTTTATTTTCTATGGCGCAATTCAGGTAATGGGAGTCTCTCCAGATGCAACACATGTTACAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368899.5
CDS-3UTR CAA 90 bp CGAGGTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACACAATAATCTGGAGTaGTTTCTGACGGGTGATCAC +
Preference number: 5 (lower is better)
Translates to: RGSISFGILEKHVSLRVGHNNLE*FLTGDH
Trigger: GTGATCACCCGTCAGAAACAACTCCAGATTATTGTG...TCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CAA 90 bp CGAGGTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGAGAAGAAATGTCTCGTTaGCTTCTGGAGACACAACCT +
Preference number: 5 (lower is better)
Translates to: RGSISFGILEKHVSLRVGEEMSR*LLETQP
Trigger: AGGTTGTGTCTCCAGAAGCAAACGAGACATTTCTTC...TCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CAA 90 bp GAGGTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACATCCTGAATTGCCACTaGCACTTCGATCCCTTTTCA +
Preference number: 5 (lower is better)
Translates to: EVAFPLASWRNMSHLGLDILNCH*HFDPFS
Trigger: TGAAAAGGGATCGAAGTGCAAGTGGCAATTCAGGAT...GTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CAA 90 bp GTCCAATCAGGCCAGAGTTGGTGGAGGGGCCATCATAGATGGCAAGAAAATCAATTTGTAGTCTGCCCGTaGATTTACAAAATGCCTCAC +
Preference number: 5 (lower is better)
Translates to: VQSGQSWWRGHHRWQENQFVVCP*IYKMPH
Trigger: GTGAGGCATTTTGTAAATCAACGGGCAGACTACAAA...TTGATTTTCTTGCCATCTATGATGGCCCCTCCACCAACTCTGGCCTGATTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368901.5
CDS-3UTR CAA 90 bp GCTTCTGGAGACACAACCTTGATTGCAGCGAGACTGGTGGTCACTGCTATCACAATGTCTCACTTAGGGTaGGACCTGTTAGTTAATAGT +
Preference number: 5 (lower is better)
Translates to: ASGDTTLIAARLVVTAITMSHLG*DLLVNS
Trigger: ACTATTAACTAACAGGTCCAACCCTAAGTGAGACAT...TGTGATAGCAGTGACCACCAGTCTCGCTGCAATCAAGGTTGTGTCTCCAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CAA 90 bp TGCAAAGTCAGAGGTGGGAGAGGCTCTACAGGTATCAAGAAACACCACCAAATTGAGGTAGCATTTCCTTaGGCATCCTGGAGAAACATG +
Preference number: 5 (lower is better)
Translates to: CKVRGGRGSTGIKKHHQIEVAFP*ASWRNM
Trigger: CATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTC...AATTTGGTGGTGTTTCTTGATACCTGTAGAGCCTCTCCCACCTCTGACTTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CAA 90 bp CACTGCTATCACATATCAAAACTTTACACTGCAGATACACAGAGCTCATACTTCCCTAGCAGAGGCCCATaGCTGGAGGTTCCGTCAAAG +
Preference number: 5 (lower is better)
Translates to: HCYHISKLYTADTQSSYFPSRGP*LEVPSK
Trigger: CTTTGACGGAACCTCCAGCAATGGGCCTCTGCTAGG...GAAGTATGAGCTCTGTGTATCTGCAGTGTAAAGTTTTGATATGTGATAGCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CAA 90 bp GAGGTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACTTTCTGGTCTTTCTATaGTCCAGGTGCAGTTCTCAC +
Preference number: 5 (lower is better)
Translates to: EVAFPLASWRNMSHLGLDFLVFL*SRCSSH
Trigger: GTGAGAACTGCACCTGGACAATAGAAAGACCAGAAA...GTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392790.6
CDS GCA 90 bp ATGTACTGGATGATGATTCAAATACAGGAACATAGTCGTTTTTACTaGAGACTTGCCCTAGCAGAGGCCCATTGCTGGAGGTTCCGTCAA +
Preference number: 5 (lower is better)
Translates to: MYWMMIQIQEHSRFY*RLALAEAHCWRFRQ
Trigger: TTGACGGAACCTCCAGCAATGGGCCTCTGCTAGGGCAAGTCTGCAGTAAAAACGACTATGTTCCTGTATTTGAATCATCATCCAGTACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CAA 90 bp TCATTTATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTTTGGCATCCTGGTCTGGAGACACAACCTaGATTGCAGCGAGACTGGTG +
Preference number: 5 (lower is better)
Translates to: SFIHNMCSHEVAFPLASWSGDTT*IAARLV
Trigger: CACCAGTCTCGCTGCAATCAAGGTTGTGTCTCCAGA...CCAGGATGCCAAAGGAAATGCTACCTCGTGGCTACACATATTATGAATAAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CAA 90 bp AGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGTTATCCTGAATTGCCACTaGCACTTCGATCCCTTTTCA +
Preference number: 5 (lower is better)
Translates to: SISFGILEKHVSLRVGPVILNCH*HFDPFS
Trigger: TGAAAAGGGATCGAAGTGCAAGTGGCAATTCAGGAT...AACAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CAA 90 bp CTGCAGCTTCTGGTATTTGTAGTCTGCCCGTTGATTTACAAAATGCCTCACTGTGAGGTAGCATTTCCTTaGGCATCCTGGAGAAACATG +
Preference number: 5 (lower is better)
Translates to: LQLLVFVVCPLIYKMPHCEVAFP*ASWRNM
Trigger: CATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTC...ACAGTGAGGCATTTTGTAAATCAACGGGCAGACTACAAATACCAGAAGCTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CAA 90 bp AGCCACGAGGTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGGTAATCTTTCTCCACTaGTATGTGCCACACACAATA +
Preference number: 5 (lower is better)
Translates to: SHEVAFPLASWRNMSHLGVIFLH*YVPHTI
Trigger: TATTGTGTGTGGCACATACAAGTGGAGAAAGATTAC...CCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTACCTCGTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CAA 90 bp TGGAGATGCAAAGTCAGAGGTGGGAGAGGCTCTACAGGTATCAAGAAACACCACGTAATCTTTCTCCACTaGTATGTGCCACACACAATA +
Preference number: 5 (lower is better)
Translates to: WRCKVRGGRGSTGIKKHHVIFLH*YVPHTI
Trigger: TATTGTGTGTGGCACATACAAGTGGAGAAAGATTAC...GTGGTGTTTCTTGATACCTGTAGAGCCTCTCCCACCTCTGACTTTGCATCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CAA 90 bp GGTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGGTGTGCAGACTAACTaGAACAAAAAGAGTTTGGTT +
Preference number: 5 (lower is better)
Translates to: GSISFGILEKHVSLRVGPGVQTN*NKKSLV
Trigger: AACCAAACTCTTTTTGTTCAAGTTAGTCTGCACACC...AGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CAA 90 bp GACTGGTGGTCACTGCTATCACATATCAAAACTTTACACTGCAGATACACAGAGGAAACACCACCAAATTaGGATCTGAGGTGTGCAGAC +
Preference number: 5 (lower is better)
Translates to: DWWSLLSHIKTLHCRYTEETPPN*DLRCAD
Trigger: GTCTGCACACCTCAGATCCAAATTTGGTGGTGTTTC...CTCTGTGTATCTGCAGTGTAAAGTTTTGATATGTGATAGCAGTGACCACCAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CAA 90 bp GGCCCTTCCTCATTTATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTTTGGAAACACCACCAAATTaGGATCTGAGGTGTGCAGAC +
Preference number: 5 (lower is better)
Translates to: GPSSFIHNMCSHEVAFPLETPPN*DLRCAD
Trigger: GTCTGCACACCTCAGATCCAAATTTGGTGGTGTTTC...CAAAGGAAATGCTACCTCGTGGCTACACATATTATGAATAAATGAGGAAGGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CAA 90 bp CTGGTATTTGTAGTCTGCCCGTTGATTTACAAAATGCCTCACTGTGATTGTCGCGAAGAAATGTCTCGTTaGCTTCTGGAGACACAACCT +
Preference number: 5 (lower is better)
Translates to: LVFVVCPLIYKMPHCDCREEMSR*LLETQP
Trigger: AGGTTGTGTCTCCAGAAGCAAACGAGACATTTCTTC...GCGACAATCACAGTGAGGCATTTTGTAAATCAACGGGCAGACTACAAATACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CAA 90 bp GTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGATGTCTCACTTAGGGTaGGACCTGTTAGTTAATAGT +
Preference number: 5 (lower is better)
Translates to: VAFPLASWRNMSHLGLDLMSHLG*DLLVNS
Trigger: ACTATTAACTAACAGGTCCAACCCTAAGTGAGACAT...CAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CAA 90 bp GGTAGCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTATTTTGGTCTGCAAGTaGGGTCTTTTAGTTGCAAGT +
Preference number: 5 (lower is better)
Translates to: GSISFGILEKHVSLRVGPILVCK*GLLVAS
Trigger: ACTTGCAACTAAAAGACCCAACTTGCAGACCAAAAT...AGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CAA 90 bp TTTATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTTTGGCATCCTGGAGACAGTTCTCACTGGGATaGAGTTGCAGGATCATGGCT +
Preference number: 5 (lower is better)
Translates to: FIHNMCSHEVAFPLASWRQFSLG*SCRIMA
Trigger: AGCCATGATCCTGCAACTCAATCCCAGTGAGAACTG...TCTCCAGGATGCCAAAGGAAATGCTACCTCGTGGCTACACATATTATGAATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392790.6
CDS-3UTR CAA 90 bp CTCACTGTGATTGTCGCTACAGTCACCACATTCAGAGCTAGAACCATGAAGGAAGGTGTGCAGACTAACTaGAACAAAAAGAGTTTGGTT +
Preference number: 5 (lower is better)
Translates to: LTVIVATVTTFRARTMKEGVQTN*NKKSLV
Trigger: AACCAAACTCTTTTTGTTCAAGTTAGTCTGCACACC...TTCCTTCATGGTTCTAGCTCTGAATGTGGTGACTGTAGCGACAATCACAGTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CAA 90 bp GCATTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGTTAGGTGTGCAGACTAACTaGAACAAAAAGAGTTTGGTT +
Preference number: 5 (lower is better)
Translates to: AFPLASWRNMSHLGLDLLGVQTN*NKKSLV
Trigger: AACCAAACTCTTTTTGTTCAAGTTAGTCTGCACACC...TAACAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CAA 90 bp TCAGGCCCTTCCTCATTTATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTGAAGAAATGTCTCGTTaGCTTCTGGAGACACAACCT +
Preference number: 5 (lower is better)
Translates to: SGPSSFIHNMCSHEVAFPEEMSR*LLETQP
Trigger: AGGTTGTGTCTCCAGAAGCAAACGAGACATTTCTTC...AGGAAATGCTACCTCGTGGCTACACATATTATGAATAAATGAGGAAGGGCCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CAA 90 bp GACTGGTGGTCACTGCTATCACATATCAAAACTTTACACTGCAGATACACAGAGATCCTGAATTGCCACTaGCACTTCGATCCCTTTTCA +
Preference number: 5 (lower is better)
Translates to: DWWSLLSHIKTLHCRYTEILNCH*HFDPFS
Trigger: TGAAAAGGGATCGAAGTGCAAGTGGCAATTCAGGAT...CTCTGTGTATCTGCAGTGTAAAGTTTTGATATGTGATAGCAGTGACCACCAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CAA 90 bp TTTCCTTTGGCATCCTGGAGAAACATGTCTCACTTAGGGTTGGACCTGTTAGTTTTTGTAGTCTGCCCGTaGATTTACAAAATGCCTCAC +
Preference number: 5 (lower is better)
Translates to: FPLASWRNMSHLGLDLLVFVVCP*IYKMPH
Trigger: GTGAGGCATTTTGTAAATCAACGGGCAGACTACAAA...AACTAACAGGTCCAACCCTAAGTGAGACATGTTTCTCCAGGATGCCAAAGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CAA 90 bp AAATGCCTCACTGTGATTGTCGCTACAGTCACCACATTCAGAGCTAGAACCATGATGTCTCACTTAGGGTaGGACCTGTTAGTTAATAGT +
Preference number: 5 (lower is better)
Translates to: KCLTVIVATVTTFRARTMMSHLG*DLLVNS
Trigger: ACTATTAACTAACAGGTCCAACCCTAAGTGAGACAT...CATGGTTCTAGCTCTGAATGTGGTGACTGTAGCGACAATCACAGTGAGGCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CAA 90 bp TCATTTATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTTTGGCATCCTGGGAAGAAATGTCTCGTTaGCTTCTGGAGACACAACCT +
Preference number: 5 (lower is better)
Translates to: SFIHNMCSHEVAFPLASWEEMSR*LLETQP
Trigger: AGGTTGTGTCTCCAGAAGCAAACGAGACATTTCTTC...CCAGGATGCCAAAGGAAATGCTACCTCGTGGCTACACATATTATGAATAAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CAA 90 bp TCCTCATTTATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTTTGGCATCCATCCTGAATTGCCACTaGCACTTCGATCCCTTTTCA +
Preference number: 5 (lower is better)
Translates to: SSFIHNMCSHEVAFPLASILNCH*HFDPFS
Trigger: TGAAAAGGGATCGAAGTGCAAGTGGCAATTCAGGAT...GGATGCCAAAGGAAATGCTACCTCGTGGCTACACATATTATGAATAAATGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CAA 90 bp TCCTCATTTATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTTTGGCATCCAACAGATGCACACTGTaGAAAGGCTGGTTTGGAGTT +
Preference number: 5 (lower is better)
Translates to: SSFIHNMCSHEVAFPLASNRCTL*KGWFGV
Trigger: AACTCCAAACCAGCCTTTCAACAGTGTGCATCTGTT...GGATGCCAAAGGAAATGCTACCTCGTGGCTACACATATTATGAATAAATGAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CAA 90 bp CCGTTGATTTACAAAATGCCTCACTGTGATTGTCGCTACAGTCACCACATTCAGATTTTGGTCTGCAAGTaGGGTCTTTTAGTTGCAAGT +
Preference number: 5 (lower is better)
Translates to: PLIYKMPHCDCRYSHHIQILVCK*GLLVAS
Trigger: ACTTGCAACTAAAAGACCCAACTTGCAGACCAAAAT...CTGAATGTGGTGACTGTAGCGACAATCACAGTGAGGCATTTTGTAAATCAACGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CAA 90 bp AAGGCTGGTTTGGAGTTTCTTCCGCATGTGTTTCATGCTGAAATCCTGAATTGCATTTTGGTCTGCAAGTaGGGTCTTTTAGTTGCAAGT +
Preference number: 5 (lower is better)
Translates to: KAGLEFLPHVFHAEILNCILVCK*GLLVAS
Trigger: ACTTGCAACTAAAAGACCCAACTTGCAGACCAAAAT...GCAATTCAGGATTTCAGCATGAAACACATGCGGAAGAAACTCCAAACCAGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CAA 90 bp AAATGCCTCACTGTGATTGTCGCTACAGTCACCACATTCAGAGCTAGAACCATGCAACATTTGATAATTTaGGTCTGCAAGTTGGGTCTT +
Preference number: 5 (lower is better)
Translates to: KCLTVIVATVTTFRARTMQHLII*VCKLGL
Trigger: AAGACCCAACTTGCAGACCAAAATTATCAAATGTTG...CATGGTTCTAGCTCTGAATGTGGTGACTGTAGCGACAATCACAGTGAGGCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CAA 90 bp TTTATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTTTGGCATCCTGGAGATTTGTAGTCTGCCCGTaGATTTACAAAATGCCTCAC +
Preference number: 5 (lower is better)
Translates to: FIHNMCSHEVAFPLASWRFVVCP*IYKMPH
Trigger: GTGAGGCATTTTGTAAATCAACGGGCAGACTACAAA...TCTCCAGGATGCCAAAGGAAATGCTACCTCGTGGCTACACATATTATGAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS CCA 90 bp GCCAAACGAATCATATTAAAGTTGTGCTGTAACATGTGTTGCATCTaGAGAGACTCCCATTACCTGAATTGCGCCATAGAAAATAAAGTC +
Preference number: 5 (lower is better)
Translates to: AKRIILKLCCNMCCI*RDSHYLNCAIENKV
Trigger: GACTTTATTTTCTATGGCGCAATTCAGGTAATGGGAGTCTCTCCAGATGCAACACATGTTACAGCACAACTTTAATATGATTCGTTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368899.5
CDS-3UTR CAA 90 bp TCTGTTTTCCATTTATATGAAGAAATGTCTCGTTTGCTTCTGGAGACACAACCTAACAGATGCACACTGTaGAAAGGCTGGTTTGGAGTT +
Preference number: 5 (lower is better)
Translates to: SVFHLYEEMSRLLLETQPNRCTL*KGWFGV
Trigger: AACTCCAAACCAGCCTTTCAACAGTGTGCATCTGTT...AGGTTGTGTCTCCAGAAGCAAACGAGACATTTCTTCATATAAATGGAAAACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CAA 90 bp ACTGCTATCACATATCAAAACTTTACACTGCAGATACACAGAGCTCATACTTCTAACAGATGCACACTGTaGAAAGGCTGGTTTGGAGTT +
Preference number: 5 (lower is better)
Translates to: TAITYQNFTLQIHRAHTSNRCTL*KGWFGV
Trigger: AACTCCAAACCAGCCTTTCAACAGTGTGCATCTGTT...AGAAGTATGAGCTCTGTGTATCTGCAGTGTAAAGTTTTGATATGTGATAGCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CAA 90 bp TTTATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTTTGGCATCCTGGAGAGTAATCTTTCTCCACTaGTATGTGCCACACACAATA +
Preference number: 5 (lower is better)
Translates to: FIHNMCSHEVAFPLASWRVIFLH*YVPHTI
Trigger: TATTGTGTGTGGCACATACAAGTGGAGAAAGATTAC...TCTCCAGGATGCCAAAGGAAATGCTACCTCGTGGCTACACATATTATGAATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS-3UTR CAA 90 bp TCAGGCCCTTCCTCATTTATTCATAATATGTGTAGCCACGAGGTAGCATTTCCTCAACATTTGATAATTTaGGTCTGCAAGTTGGGTCTT +
Preference number: 5 (lower is better)
Translates to: SGPSSFIHNMCSHEVAFPQHLII*VCKLGL
Trigger: AAGACCCAACTTGCAGACCAAAATTATCAAATGTTG...AGGAAATGCTACCTCGTGGCTACACATATTATGAATAAATGAGGAAGGGCCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS GCA 90 bp ACTATTGCCAAACGAATCATATTAAAGTTGTGCTGTAACATGTGTTaGATCTGGAGAGACTCCCATTACCTGAATTGCGCCATAGAAAAT +
Preference number: 5 (lower is better)
Translates to: TIAKRIILKLCCNMC*IWRDSHYLNCAIEN
Trigger: ATTTTCTATGGCGCAATTCAGGTAATGGGAGTCTCTCCAGATGCAACACATGTTACAGCACAACTTTAATATGATTCGTTTGGCAATAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368899.5
CDS-3UTR CAA 90 bp ACTGCTATCACATATCAAAACTTTACACTGCAGATACACAGAGCTCATACTTCTTTTGTAGTCTGCCCGTaGATTTACAAAATGCCTCAC +
Preference number: 5 (lower is better)
Translates to: TAITYQNFTLQIHRAHTSFVVCP*IYKMPH
Trigger: GTGAGGCATTTTGTAAATCAACGGGCAGACTACAAA...AGAAGTATGAGCTCTGTGTATCTGCAGTGTAAAGTTTTGATATGTGATAGCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS GCA 90 bp AGAGGGAATCTTTATACTATTGCCAAACGAATCATATTAAAGTTGTaGTGTAACATGTGTTGCATCTGGAGAGACTCCCATTACCTGAAT +
Preference number: 5 (lower is better)
Translates to: RGNLYTIAKRIILKL*CNMCCIWRDSHYLN
Trigger: ATTCAGGTAATGGGAGTCTCTCCAGATGCAACACATGTTACAGCACAACTTTAATATGATTCGTTTGGCAATAGTATAAAGATTCCCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368899.5
CDS-3UTR CAA 90 bp ATTATCTCCACTGTAGAATTATGTCCCATTTCACACTTCACAATAATCTGGAGTATGTCTCACTTAGGGTaGGACCTGTTAGTTAATAGT +
Preference number: 5 (lower is better)
Translates to: IISTVELCPISHFTIIWSMSHLG*DLLVNS
Trigger: ACTATTAACTAACAGGTCCAACCCTAAGTGAGACAT...ACTCCAGATTATTGTGAAGTGTGAAATGGGACATAATTCTACAGTGGAGATAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338948.3
ENST00000368900.5
ENST00000368901.5
CDS-3UTR CAA 90 bp AATCTGTTTTCCATTTATATGAAGAAATGTCTCGTTTGCTTCTGGAGACACAACCAACATTTGATAATTTaGGTCTGCAAGTTGGGTCTT +
Preference number: 5 (lower is better)
Translates to: NLFSIYMKKCLVCFWRHNQHLII*VCKLGL
Trigger: AAGACCCAACTTGCAGACCAAAATTATCAAATGTTG...GTTGTGTCTCCAGAAGCAAACGAGACATTTCTTCATATAAATGGAAAACAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
CDS TCA 72 bp CTTTGTGGGTCTCTGCCATATTGGCACCCCCTAGACTaGCTGTGCAGCTTGCATTGCCTTCAGCCTCCGCCA +
Preference number: 6 (lower is better)
Translates to: LCGSLPYWHPLD*LCSLHCLQPPP
Trigger: TGGCGGAGGCTGAAGGCAATGCAAGCTGCACAGTCAGTCTAGGGGGTGCCAATATGGCAGAGACCCACAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392790.6
CDS CAA 90 bp CTGGGATTGAGTTGCAGGATCATGGCTTTGTGGGTCTCTGCCATATaGGCACCCCCTAGACTGACTGTGCAGCTTGCATTGCCTTCAGCC +
Preference number: 6 (lower is better)
Translates to: LGLSCRIMALWVSAI*APPRLTVQLALPSA
Trigger: GGCTGAAGGCAATGCAAGCTGCACAGTCAGTCTAGGGGGTGCCAATATGGCAGAGACCCACAAAGCCATGATCCTGCAACTCAATCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392790.6
CDS CAA 90 bp GTCCAGGTGCAGTTCTCACTGGGATTGAGTTGCAGGATCATGGCTTaGTGGGTCTCTGCCATATTGGCACCCCCTAGACTGACTGTGCAG +
Preference number: 6 (lower is better)
Translates to: VQVQFSLGLSCRIMA*WVSAILAPPRLTVQ
Trigger: CTGCACAGTCAGTCTAGGGGGTGCCAATATGGCAGAGACCCACAAAGCCATGATCCTGCAACTCAATCCCAGTGAGAACTGCACCTGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392790.6
CDS CAA 72 bp CAGCTTCCATCTGGATCAAGCCTTCAGCCTCCGCCATaGTCAGCTCCGCCAAACAGGAGAGAATTAAGAGGG +
Preference number: 6 (lower is better)
Translates to: QLPSGSSLQPPP*SAPPNRRELRG
Trigger: CCCTCTTAATTCTCTCCTGTTTGGCGGAGCTGACAATGGCGGAGGCTGAAGGCTTGATCCAGATGGAAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368900.5
ENST00000368901.5
CDS CAA 72 bp AGTTGCAGGATCATGGCTTTGTGGGTCTCTGCCATATaGGCACCCCCTAGACTGACTGTGCAGCTTGCATTG +
Preference number: 6 (lower is better)
Translates to: SCRIMALWVSAI*APPRLTVQLAL
Trigger: CAATGCAAGCTGCACAGTCAGTCTAGGGGGTGCCAATATGGCAGAGACCCACAAAGCCATGATCCTGCAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392790.6
CDS CCA 72 bp TTCTCACTGGGATTGAGTTGCAGGATCATGGCTTTGTaGGTCTCTGCCATATTGGCACCCCCTAGACTGACT +
Preference number: 6 (lower is better)
Translates to: FSLGLSCRIMAL*VSAILAPPRLT
Trigger: AGTCAGTCTAGGGGGTGCCAATATGGCAGAGACCCACAAAGCCATGATCCTGCAACTCAATCCCAGTGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392790.6
CDS CAA 72 bp GGTCTTTCTATTGTCCAGGTGCAGTTCTCACTGGGATaGAGTTGCAGGATCATGGCTTTGTGGGTCTCTGCC +
Preference number: 6 (lower is better)
Translates to: GLSIVQVQFSLG*SCRIMALWVSA
Trigger: GGCAGAGACCCACAAAGCCATGATCCTGCAACTCAATCCCAGTGAGAACTGCACCTGGACAATAGAAAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392790.6
CDS GCA 72 bp TCTATTGTCCAGGTGCAGTTCTCACTGGGATTGAGTTaGAGGATCATGGCTTTGTGGGTCTCTGCCATATTG +
Preference number: 6 (lower is better)
Translates to: SIVQVQFSLGLS*RIMALWVSAIL
Trigger: CAATATGGCAGAGACCCACAAAGCCATGATCCTGCAACTCAATCCCAGTGAGAACTGCACCTGGACAATAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392790.6
CDS CAA 90 bp TTGTTTTCTGGTCTTTCTATTGTCCAGGTGCAGTTCTCACTGGGATaGAGTTGCAGGATCATGGCTTTGTGGGTCTCTGCCATATTGGCA +
Preference number: 6 (lower is better)
Translates to: LFSGLSIVQVQFSLG*SCRIMALWVSAILA
Trigger: TGCCAATATGGCAGAGACCCACAAAGCCATGATCCTGCAACTCAATCCCAGTGAGAACTGCACCTGGACAATAGAAAGACCAGAAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392790.6
CDS GCA 72 bp ATGATGATTCAAATACAGGAACATAGTCGTTTTTACTaGAGACTTGCCCTAGCAGAGGCCCATTGCTGGAGG +
Preference number: 6 (lower is better)
Translates to: MMIQIQEHSRFY*RLALAEAHCWR
Trigger: CCTCCAGCAATGGGCCTCTGCTAGGGCAAGTCTGCAGTAAAAACGACTATGTTCCTGTATTTGAATCATCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS CAA 72 bp TCGTTTTTACTGCAGACTTGCCCTAGCAGAGGCCCATaGCTGGAGGTTCCGTCAAAGACTTTAATGTTTTCA +
Preference number: 6 (lower is better)
Translates to: SFLLQTCPSRGP*LEVPSKTLMFS
Trigger: TGAAAACATTAAAGTCTTTGACGGAACCTCCAGCAATGGGCCTCTGCTAGGGCAAGTCTGCAGTAAAAACGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368900.5
ENST00000368901.5
ENST00000392790.6
CDS GCA 72 bp ATGTGTTGCATCTGGAGAGACTCCCATTACCTGAATTaGGCCATAGAAAATAAAGTCACACCCTCCCTTGAA +
Preference number: 6 (lower is better)
Translates to: MCCIWRDSHYLN*AIENKVTPSLE
Trigger: TTCAAGGGAGGGTGTGACTTTATTTTCTATGGCGCAATTCAGGTAATGGGAGTCTCTCCAGATGCAACACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368899.5
CDS GCA 72 bp AAACGAATCATATTAAAGTTGTGCTGTAACATGTGTTaGATCTGGAGAGACTCCCATTACCTGAATTGCGCC +
Preference number: 6 (lower is better)
Translates to: KRIILKLCCNMC*IWRDSHYLNCA
Trigger: GGCGCAATTCAGGTAATGGGAGTCTCTCCAGATGCAACACATGTTACAGCACAACTTTAATATGATTCGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368899.5
CDS CAA 90 bp CAGAGAGGGAATCTTTATACTATTGCCAAACGAATCATATTAAAGTaGTGCTGTAACATGTGTTGCATCTGGAGAGACTCCCATTACCTG +
Preference number: 6 (lower is better)
Translates to: QRGNLYTIAKRIILK*CCNMCCIWRDSHYL
Trigger: CAGGTAATGGGAGTCTCTCCAGATGCAACACATGTTACAGCACAACTTTAATATGATTCGTTTGGCAATAGTATAAAGATTCCCTCTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368899.5
CDS CCA 72 bp ATCATATTAAAGTTGTGCTGTAACATGTGTTGCATCTaGAGAGACTCCCATTACCTGAATTGCGCCATAGAA +
Preference number: 6 (lower is better)
Translates to: IILKLCCNMCCI*RDSHYLNCAIE
Trigger: TTCTATGGCGCAATTCAGGTAATGGGAGTCTCTCCAGATGCAACACATGTTACAGCACAACTTTAATATGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368899.5
CDS GCA 72 bp CTTTATACTATTGCCAAACGAATCATATTAAAGTTGTaGTGTAACATGTGTTGCATCTGGAGAGACTCCCAT +
Preference number: 6 (lower is better)
Translates to: LYTIAKRIILKL*CNMCCIWRDSH
Trigger: ATGGGAGTCTCTCCAGATGCAACACATGTTACAGCACAACTTTAATATGATTCGTTTGGCAATAGTATAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368899.5