RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CUL4A (Homo sapiens)

Ensembl gene IDs: ENSG00000139842

Ensembl transcript IDs: ENST00000326335.8, ENST00000375440.9, ENST00000375441.7, ENST00000451881.5, ENST00000463426.5, ENST00000470067.5, ENST00000474116.5, ENST00000488558.2, ENST00000494985.5, ENST00000498562.2, ENST00000617546.4

Found 686 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAGATGACGGACGATGAGTGCTATGTGCTCAGGAGGCCGGGAGGCTaGGCAAGCCATTCCACAGGGGACGCACAGCCTCAGGGCTGCGAC +
Preference number: 1 (lower is better)
Translates to: KMTDDECYVLRRPGG*ASHSTGDAQPQGCD
Trigger: GTCGCAGCCCTGAGGCTGTGCGTCCCCTGTGGAATGGCTTGCTCAGCCTCCCGGCCTCCTGAGCACATAGCACTCATCGTCCGTCATCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488558.2
3UTR GCA 90 bp GCTGCGACCCCACGGGCAGCAGGCAGTCTTTCTCCGAGTTTCAACTaGAGCGCTGGAAAGAGCCGCTCCAGGCTCAACCTCCAGTCGTCA +
Preference number: 1 (lower is better)
Translates to: AATPRAAGSLSPSFN*SAGKSRSRLNLQSS
Trigger: TGACGACTGGAGGTTGAGCCTGGAGCGGCTCTTTCCAGCGCTGCAGTTGAAACTCGGAGAAAGACTGCCTGCTGCCCGTGGGGTCGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488558.2
3UTR GCA 90 bp AAATCAGACGGTGAGACCGGACACAGCTTTTGTCCAAAGTCGGCTTaGAGGAGGCGGCAGGATTCAGCGCCATGGGGTGGCCACAGAGGA +
Preference number: 1 (lower is better)
Translates to: KSDGETGHSFCPKSA*RRRQDSAPWGGHRG
Trigger: TCCTCTGTGGCCACCCCATGGCGCTGAATCCTGCCGCCTCCTGCAAGCCGACTTTGGACAAAAGCTGTGTCCGGTCTCACCGTCTGATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488558.2
3UTR CCA 90 bp CCCACGGGCAGCAGGCAGTCTTTCTCCGAGTTTCAACTGCAGCGCTaGAAAGAGCCGCTCCAGGCTCAACCTCCAGTCGTCAGAGAGAAA +
Preference number: 1 (lower is better)
Translates to: PTGSRQSFSEFQLQR*KEPLQAQPPVVREK
Trigger: TTTCTCTCTGACGACTGGAGGTTGAGCCTGGAGCGGCTCTTTCCAGCGCTGCAGTTGAAACTCGGAGAAAGACTGCCTGCTGCCCGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488558.2
3UTR CCA 90 bp GACCCAGGAGCCACCTCCCTTCCTTCGCCTTCCAATGTCCACAGCTaGATCAATCAGAGTCCCAGAAATGGCACAGGTGTGCTTCCTGCT +
Preference number: 1 (lower is better)
Translates to: DPGATSLPSPSNVHS*INQSPRNGTGVLPA
Trigger: AGCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGATTGATCCAGCTGTGGACATTGGAAGGCGAAGGAAGGGAGGTGGCTCCTGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR TCA 90 bp ACACTAGCCCCAAACCCTAAAACAGAGATTCACAAGGAACTCAGCTaGCGAACAGACGCAGCAGGGCGGACACCATGGCCTTGGCACCTC +
Preference number: 1 (lower is better)
Translates to: TLAPNPKTEIHKELS*RTDAAGRTPWPWHL
Trigger: GAGGTGCCAAGGCCATGGTGTCCGCCCTGCTGCGTCTGTTCGTCAGCTGAGTTCCTTGTGAATCTCTGTTTTAGGGTTTGGGGCTAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR CCA 90 bp GGGCCAGTGGCTAGGGTGCGTCATCCATTCGCCAGCTTTGAACCCTaGCTCTTTCTAATGTTCACCCATGAAGGGCCCTTGTTTTCACTC +
Preference number: 1 (lower is better)
Translates to: GPVARVRHPFASFEP*LFLMFTHEGPLFSL
Trigger: GAGTGAAAACAAGGGCCCTTCATGGGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCTAGCCACTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR CCA 90 bp AAACTAAAATGGAAACAGGATCTCCCTATGGTGCTCAGGATGGTCTaGAACTCAGGCTCAAACGATCCTCCCACCTTGCCCTCCCATAGC +
Preference number: 1 (lower is better)
Translates to: KLKWKQDLPMVLRMV*NSGSNDPPTLPSHS
Trigger: GCTATGGGAGGGCAAGGTGGGAGGATCGTTTGAGCCTGAGTTCCAGACCATCCTGAGCACCATAGGGAGATCCTGTTTCCATTTTAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
3UTR TCA 90 bp GGATCAATCAGAGTCCCAGAAATGGCACAGGTGTGCTTCCTGCTCTaGGGGTACATTCTAGTGTTTCATGAAGGGGAACCGTCTGCAGAT +
Preference number: 1 (lower is better)
Translates to: GSIRVPEMAQVCFLL*GYILVFHEGEPSAD
Trigger: ATCTGCAGACGGTTCCCCTTCATGAAACACTAGAATGTACCCTCAGAGCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGATTGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR GCA 90 bp TTTCTCTTTTCAAGGTGGCCCAAACTTCTGAGCATGGGTAGTTGTTaGAAAGTTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCACG +
Preference number: 1 (lower is better)
Translates to: FLFSRWPKLLSMGSC*KVPVPDHTRPLCAT
Trigger: CGTGGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAACTTTGCAACAACTACCCATGCTCAGAAGTTTGGGCCACCTTGAAAAGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
3UTR TCA 90 bp CCAGGAAAGAATAATCACTTGAGAGGGGACAGGTGCTCCCTGCTCTaGCTTCTGTCTAGTGCACTAGTAGTCAAAGCTGCTAAAGAGTTA +
Preference number: 1 (lower is better)
Translates to: PGKNNHLRGDRCSLL*LLSSALVVKAAKEL
Trigger: TAACTCTTTAGCAGCTTTGACTACTAGTGCACTAGACAGAAGTCAGAGCAGGGAGCACCTGTCCCCTCTCAAGTGATTATTCTTTCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
3UTR TCA 90 bp GCGGACACCATGGCCTTGGCACCTCAGGGAGCTCACTTAGAAACCTaGCTTACGAAAAATCAGCCATCAAAGTTTACAACTTTTGGAAAT +
Preference number: 1 (lower is better)
Translates to: ADTMALAPQGAHLET*LTKNQPSKFTTFGN
Trigger: ATTTCCAAAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR CCA 90 bp TGTCCAAAGTCGGCTTGCAGGAGGCGGCAGGATTCAGCGCCATGGGGTGGCCACTCAGCAGAGGACATGTaGGGTCCGTGGCCGCGAACG +
Preference number: 2 (lower is better)
Translates to: CPKSACRRRQDSAPWGGHSAEDM*GPWPRT
Trigger: CGTTCGCGGCCACGGACCCCACATGTCCTCTGCTGA...GTGGCCACCCCATGGCGCTGAATCCTGCCGCCTCCTGCAAGCCGACTTTGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488558.2
3UTR-3UTR CCA 90 bp CATTCCACAGGGGACGCACAGCCTCAGGGCTGCGACCCCACGGGCAGCAGGCAGTCCACTCCTTGCTGCTaGCTAGACACCTGGTGTTTC +
Preference number: 2 (lower is better)
Translates to: HSTGDAQPQGCDPTGSRQSTPCC*LDTWCF
Trigger: GAAACACCAGGTGTCTAGCCAGCAGCAAGGAGTGGA...CTGCCTGCTGCCCGTGGGGTCGCAGCCCTGAGGCTGTGCGTCCCCTGTGGAATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488558.2
3UTR-3UTR GCA 90 bp TGTCCAAAGTCGGCTTGCAGGAGGCGGCAGGATTCAGCGCCATGGGGTGGCCACACGATGAGTGCTATGTaGTCAGGAGGCCGGGAGGCT +
Preference number: 2 (lower is better)
Translates to: CPKSACRRRQDSAPWGGHTMSAM*SGGREA
Trigger: AGCCTCCCGGCCTCCTGAGCACATAGCACTCATCGT...GTGGCCACCCCATGGCGCTGAATCCTGCCGCCTCCTGCAAGCCGACTTTGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488558.2
3UTR-3UTR CCA 90 bp CGCAGCAGGGCGGACACCATGGCCTTGGCACCTCAGGGAGCTCACTTAGAAACCACAGAGAGGGGCCAGTaGCTAGGGTGCGTCATCCAT +
Preference number: 2 (lower is better)
Translates to: RSRADTMALAPQGAHLETTERGQ*LGCVIH
Trigger: ATGGATGACGCACCCTAGCCACTGGCCCCTCTCTGT...GGTTTCTAAGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR TCA 90 bp CCGTGGCCGCGAACGCTGCTGAGGAAAGGCCCCAGAACCCCTGGTGTATACAGTCTGTCTTCACCCTCATaGCCAAAGTCAGCCGCCTGT +
Preference number: 2 (lower is better)
Translates to: PWPRTLLRKGPRTPGVYSLSSPS*PKSAAC
Trigger: ACAGGCGGCTGACTTTGGTCATGAGGGTGAAGACAG...ACTGTATACACCAGGGGTTCTGGGGCCTTTCCTCAGCAGCGTTCGCGGCCACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488558.2
3UTR-3UTR GCA 90 bp GGTGAGACCGGACACAGCTTTTGTCCAAAGTCGGCTTGCAGGAGGCGGCAGGATCCTGTCCGAGCTTCCTaGTCCACTCCTTGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: GETGHSFCPKSACRRRQDPVRAS*STPCCW
Trigger: CCAGCAGCAAGGAGTGGAGCAGGAAGCTCGGACAGG...ATCCTGCCGCCTCCTGCAAGCCGACTTTGGACAAAAGCTGTGTCCGGTCTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488558.2
3UTR-3UTR CCA 90 bp TGCTCAGGAGGCCGGGAGGCTGAGCAAGCCATTCCACAGGGGACGCACAGCCTCTGCTGGCTAGACACCTaGTGTTTCAAGGCTAAGACC +
Preference number: 2 (lower is better)
Translates to: CSGGREAEQAIPQGTHSLCWLDT*CFKAKT
Trigger: GGTCTTAGCCTTGAAACACCAGGTGTCTAGCCAGCA...GAGGCTGTGCGTCCCCTGTGGAATGGCTTGCTCAGCCTCCCGGCCTCCTGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488558.2
3UTR-3UTR CCA 90 bp CCGTGGCCGCGAACGCTGCTGAGGAAAGGCCCCAGAACCCCTGGTGTATACAGTTTTCAACTGCAGCGCTaGAAAGAGCCGCTCCAGGCT +
Preference number: 2 (lower is better)
Translates to: PWPRTLLRKGPRTPGVYSFQLQR*KEPLQA
Trigger: AGCCTGGAGCGGCTCTTTCCAGCGCTGCAGTTGAAA...ACTGTATACACCAGGGGTTCTGGGGCCTTTCCTCAGCAGCGTTCGCGGCCACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488558.2
3UTR-3UTR TCA 90 bp CAGCTTTTGTCCAAAGTCGGCTTGCAGGAGGCGGCAGGATTCAGCGCCATGGGGACAGTCCCCGAAAGATaGCGGACGATGAGTGCTATG +
Preference number: 2 (lower is better)
Translates to: QLLSKVGLQEAAGFSAMGTVPER*RTMSAM
Trigger: CATAGCACTCATCGTCCGTCATCTTTCGGGGACTGT...CCCCATGGCGCTGAATCCTGCCGCCTCCTGCAAGCCGACTTTGGACAAAAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488558.2
3UTR-3UTR GCA 90 bp CGCAGCAGGGCGGACACCATGGCCTTGGCACCTCAGGGAGCTCACTTAGAAACCGGGTCTTCTTCATTGTaGACTCATGATCACACACGA +
Preference number: 2 (lower is better)
Translates to: RSRADTMALAPQGAHLETGSSSL*THDHTR
Trigger: TCGTGTGTGATCATGAGTGCACAATGAAGAAGACCC...GGTTTCTAAGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGCTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR GCA 90 bp ATGGGTAGTTGTTGCAAAGTTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCGGCCAGTGGCTAGGGTaGGTCATCCATTCGCCAGCT +
Preference number: 2 (lower is better)
Translates to: MGSCCKVPVPDHTRPLCAGQWLG*VIHSPA
Trigger: AGCTGGCGAATGGATGACGCACCCTAGCCACTGGCC...GGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAACTTTGCAACAACTACCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
3UTR-3UTR GCA 90 bp CCAGGCTCAACCTCCAGTCGTCAGAGAGAAACCAAGACCCTCTGTCTTCACCCTTGCTCCACTCCTTGCTaGTGGCTAGACACCTGGTGT +
Preference number: 2 (lower is better)
Translates to: PGSTSSRQRETKTLCLHPCSTPC*WLDTWC
Trigger: ACACCAGGTGTCTAGCCAGCAGCAAGGAGTGGAGCA...AGGGTGAAGACAGAGGGTCTTGGTTTCTCTCTGACGACTGGAGGTTGAGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488558.2
3UTR-3UTR TCA 90 bp AGGGTGCGTCATCCATTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCGAGCCTTGTGAAAGATaGCCCAGGAGCCACCTCCCT +
Preference number: 2 (lower is better)
Translates to: RVRHPFASFEPWLFLMFTEPCER*PRSHLP
Trigger: AGGGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTC...GGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR CCA 90 bp ATGGGTAGTTGTTGCAAAGTTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCTTGCCCTCCCATAGCTaGGACTACAGGCGTGAGCCA +
Preference number: 2 (lower is better)
Translates to: MGSCCKVPVPDHTRPLCALPSHS*DYRREP
Trigger: TGGCTCACGCCTGTAGTCCCAGCTATGGGAGGGCAA...GGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAACTTTGCAACAACTACCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
3UTR-3UTR GCA 90 bp TTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCACGCCGAGTTCCTGTGTATAGGATCTCCCTATGGTaGTCAGGATGGTCTGGAACT +
Preference number: 2 (lower is better)
Translates to: FQFLITHGPFVPRRVPVYRISLW*SGWSGT
Trigger: AGTTCCAGACCATCCTGAGCACCATAGGGAGATCCT...ATACACAGGAACTCGGCGTGGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
3UTR-3UTR CCA 90 bp TTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCACGCCGAGTTCCTGTGTATACTACCTGGCCCCACTaGTATTTTGTGGTAGAGGTG +
Preference number: 2 (lower is better)
Translates to: FQFLITHGPFVPRRVPVYTTWPH*YFVVEV
Trigger: CACCTCTACCACAAAATACCAGTGGGGCCAGGTAGT...ATACACAGGAACTCGGCGTGGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
3UTR-3UTR CCA 90 bp TTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCACGCCGAGTTCCTGTGTATGTGCTCAGGATGGTCTaGAACTCAGGCTCAAACGAT +
Preference number: 2 (lower is better)
Translates to: FQFLITHGPFVPRRVPVYVLRMV*NSGSND
Trigger: ATCGTTTGAGCCTGAGTTCCAGACCATCCTGAGCAC...ATACACAGGAACTCGGCGTGGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
3UTR-3UTR CCA 90 bp AAACAGGGACTGCCAGACTCAATCTTAGAATGGAAACACAAACACACTAGCCCCCGGACACCATGGCCTTaGCACCTCAGGGAGCTCACT +
Preference number: 2 (lower is better)
Translates to: KQGLPDSILEWKHKHTSPRTPWP*HLRELT
Trigger: AGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCG...GGGGCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTCTGGCAGTCCCTGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR CCA 90 bp CAGAGAACAAGGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATGCAGGGCGGACACCATaGCCTTGGCACCTCAGGGAG +
Preference number: 2 (lower is better)
Translates to: QRTRIVPAHDCKNQTKLYAGRTP*PWHLRE
Trigger: CTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGC...ATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCCTTGTTCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR TCA 90 bp CATCTGCAGGTTGAAGTCTTGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCCCATTCTAGTGTTTCATaGAGGGGAACCGTCTGCAGA +
Preference number: 2 (lower is better)
Translates to: HLQVEVLSLVKDDPGATSHSSVS*RGTVCR
Trigger: TCTGCAGACGGTTCCCCTTCATGAAACACTAGAATG...GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR TCA 90 bp CAGCATCTAGGGTCTTCTTCATTGTGCACTCATGATCACACACGAGAACAAACCGAGCCTTGTGAAAGATaGCCCAGGAGCCACCTCCCT +
Preference number: 2 (lower is better)
Translates to: QHLGSSSLCTHDHTREQTEPCER*PRSHLP
Trigger: AGGGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTC...GGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAGACCCTAGATGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR CCA 90 bp TTTCTTCAGTCACAGATTTTCATTTGCTCCTTAGATGACCTGGGTATGCAACCAGCAGGGCGGACACCATaGCCTTGGCACCTCAGGGAG +
Preference number: 2 (lower is better)
Translates to: FLQSQIFICSLDDLGMQPAGRTP*PWHLRE
Trigger: CTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGC...TGGTTGCATACCCAGGTCATCTAAGGAGCAAATGAAAATCTGTGACTGAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
3UTR-3UTR GCA 90 bp CAGAGAACAAGGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATGGCCAGTGGCTAGGGTaGGTCATCCATTCGCCAGCT +
Preference number: 2 (lower is better)
Translates to: QRTRIVPAHDCKNQTKLYGQWLG*VIHSPA
Trigger: AGCTGGCGAATGGATGACGCACCCTAGCCACTGGCC...ATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCCTTGTTCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR GCA 90 bp ATTAACAGAGAACAAGACAAATCAGACGGTGAGACCGGACACAGCTTTTGTCCATCCTGCTCCACTCCTTaGTGCTGGCTAGACACCTGG +
Preference number: 2 (lower is better)
Translates to: INREQDKSDGETGHSFCPSCSTP*CWLDTW
Trigger: CCAGGTGTCTAGCCAGCAGCAAGGAGTGGAGCAGGA...TGGACAAAAGCTGTGTCCGGTCTCACCGTCTGATTTGTCTTGTTCTCTGTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488558.2
3UTR-3UTR TCA 90 bp CAGAGAACAAGGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATGAGCCTTGTGAAAGATaGCCCAGGAGCCACCTCCCT +
Preference number: 2 (lower is better)
Translates to: QRTRIVPAHDCKNQTKLYEPCER*PRSHLP
Trigger: AGGGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTC...ATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCCTTGTTCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR TCA 90 bp AGGGTGCGTCATCCATTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCGATACATCTGCAGGTTaGAGTCTTGAGCCTTGTGAA +
Preference number: 2 (lower is better)
Translates to: RVRHPFASFEPWLFLMFTDTSAG*SLEPCE
Trigger: TTCACAAGGCTCAAGACTTCAACCTGCAGATGTATC...GGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR TCA 90 bp ATGGGTAGTTGTTGCAAAGTTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCTCTAATGTTCACCCATaGAGGGCCCTTGTTTTCACT +
Preference number: 2 (lower is better)
Translates to: MGSCCKVPVPDHTRPLCASNVHP*RALVFT
Trigger: AGTGAAAACAAGGGCCCTTCATGGGTGAACATTAGA...GGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAACTTTGCAACAACTACCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
3UTR-3UTR TCA 90 bp TCTTCATTGTGCACTCATGATCACACACGAGAACAAACCAAACTTGCAGCTTTTGAGCCTTGTGAAAGATaGCCCAGGAGCCACCTCCCT +
Preference number: 2 (lower is better)
Translates to: SSLCTHDHTREQTKLAAFEPCER*PRSHLP
Trigger: AGGGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTC...AAAAGCTGCAAGTTTGGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR TCA 90 bp GGGAGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACGAGCCTTGTGAAAGATaGCCCAGGAGCCACCTCCCT +
Preference number: 2 (lower is better)
Translates to: GSSLRNLTYEKSAIKVYNEPCER*PRSHLP
Trigger: AGGGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTC...GTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR TCA 90 bp TTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCACGCCGAGTTCCTGTGTATAAACTTGCAGCTTTTTaGCACAAGAACAAGACCTTT +
Preference number: 2 (lower is better)
Translates to: FQFLITHGPFVPRRVPVYKLAAF*HKNKTF
Trigger: AAAGGTCTTGTTCTTGTGTCAAAAAGCTGCAAGTTT...ATACACAGGAACTCGGCGTGGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
3UTR-3UTR TCA 90 bp TTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCATGAAGGGCCCTTGTTCATTGTGCACTCATaGTCACACACGAGAACAAAC +
Preference number: 2 (lower is better)
Translates to: FASFEPWLFLMFTHEGPLFIVHS*SHTRTN
Trigger: GTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAA...CAAGGGCCCTTCATGGGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR TCA 90 bp AGGGTGCGTCATCCATTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCTTCATTGTGCACTCATaGTCACACACGAGAACAAAC +
Preference number: 2 (lower is better)
Translates to: RVRHPFASFEPWLFLMFTFIVHS*SHTRTN
Trigger: GTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAA...GGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR TCA 90 bp ATGGGTAGTTGTTGCAAAGTTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCGCTCACTTAGAAACCTaGCTTACGAAAAATCAGCCA +
Preference number: 2 (lower is better)
Translates to: MGSCCKVPVPDHTRPLCAAHLET*LTKNQP
Trigger: TGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGC...GGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAACTTTGCAACAACTACCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
3UTR-3UTR TCA 90 bp GGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTATTGCAATCCACAAGGAACTCAGCTaGCGAACAGACGCAGCAGGG +
Preference number: 2 (lower is better)
Translates to: GSSLRMTVKTKPNFIIAIHKELS*RTDAAG
Trigger: CCCTGCTGCGTCTGTTCGTCAGCTGAGTTCCTTGTG...GATTGCAATAATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR CCA 90 bp TTTCTTCAGTCACAGATTTTCATTTGCTCCTTAGATGACCTGGGTATGCAACCAACAGAGAGGGGCCAGTaGCTAGGGTGCGTCATCCAT +
Preference number: 2 (lower is better)
Translates to: FLQSQIFICSLDDLGMQPTERGQ*LGCVIH
Trigger: ATGGATGACGCACCCTAGCCACTGGCCCCTCTCTGT...TGGTTGCATACCCAGGTCATCTAAGGAGCAAATGAAAATCTGTGACTGAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
3UTR-3UTR TCA 90 bp CAGCATCTAGGGTCTTCTTCATTGTGCACTCATGATCACACACGAGAACAAACCGTGTGCTTCCTGCTCTaGGGGTACATTCTAGTGTTT +
Preference number: 2 (lower is better)
Translates to: QHLGSSSLCTHDHTREQTVCFLL*GYILVF
Trigger: AAACACTAGAATGTACCCTCAGAGCAGGAAGCACAC...GGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAGACCCTAGATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR TCA 90 bp AAACAGGGACTGCCAGACTCAATCTTAGAATGGAAACACAAACACACTAGCCCCTCCATTCGCCAGCTTTaGACCCTGGCTCTTTCTAAT +
Preference number: 2 (lower is better)
Translates to: KQGLPDSILEWKHKHTSPSIRQL*TLALSN
Trigger: ATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGA...GGGGCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTCTGGCAGTCCCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR TCA 90 bp ATGGGTAGTTGTTGCAAAGTTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCGTCTGGTTAACTTGGTaGATTCTTTCTTCAGTCACA +
Preference number: 2 (lower is better)
Translates to: MGSCCKVPVPDHTRPLCAVWLTW*ILSSVT
Trigger: TGTGACTGAAGAAAGAATTCACCAAGTTAACCAGAC...GGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAACTTTGCAACAACTACCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
3UTR-3UTR CCA 90 bp CAGAGAACAAGGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTCAGAGTCCCAGAAATaGCACAGGTGTGCTTCCTGC +
Preference number: 2 (lower is better)
Translates to: QRTRIVPAHDCKNQTKLYSESQK*HRCASC
Trigger: GCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGA...ATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCCTTGTTCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR TCA 90 bp CAGCATCTAGGGTCTTCTTCATTGTGCACTCATGATCACACACGAGAACAAACCGATACATCTGCAGGTTaGAGTCTTGAGCCTTGTGAA +
Preference number: 2 (lower is better)
Translates to: QHLGSSSLCTHDHTREQTDTSAG*SLEPCE
Trigger: TTCACAAGGCTCAAGACTTCAACCTGCAGATGTATC...GGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAGACCCTAGATGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR TCA 90 bp AGGGTGCGTCATCCATTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCAAACTTGCAGCTTTTTaGCACAAGAACAAGACCTTT +
Preference number: 2 (lower is better)
Translates to: RVRHPFASFEPWLFLMFTKLAAF*HKNKTF
Trigger: AAAGGTCTTGTTCTTGTGTCAAAAAGCTGCAAGTTT...GGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR TCA 90 bp AAACAGGGACTGCCAGACTCAATCTTAGAATGGAAACACAAACACACTAGCCCCTTTCACTCTAAATGCTaGTCATCTGAGCGAGCTGTC +
Preference number: 2 (lower is better)
Translates to: KQGLPDSILEWKHKHTSPFHSKC*SSERAV
Trigger: GACAGCTCGCTCAGATGATCAGCATTTAGAGTGAAA...GGGGCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTCTGGCAGTCCCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR TCA 90 bp TTTCTTCAGTCACAGATTTTCATTTGCTCCTTAGATGACCTGGGTATGCAACCAAGGTGCTCCCTGCTCTaGCTTCTGTCTAGTGCACTA +
Preference number: 2 (lower is better)
Translates to: FLQSQIFICSLDDLGMQPRCSLL*LLSSAL
Trigger: TAGTGCACTAGACAGAAGTCAGAGCAGGGAGCACCT...TGGTTGCATACCCAGGTCATCTAAGGAGCAAATGAAAATCTGTGACTGAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
3UTR-3UTR GCA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTGGCCAGTGGCTAGGGTaGGTCATCCATTCGCCAGCT +
Preference number: 2 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFGQWLG*VIHSPA
Trigger: AGCTGGCGAATGGATGACGCACCCTAGCCACTGGCC...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR GCA 90 bp CCTCTGCTTCACAACATCAAGACTTTAAGTCTCCATAAACTTTTTACAGTTTACGGCCAGTGGCTAGGGTaGGTCATCCATTCGCCAGCT +
Preference number: 2 (lower is better)
Translates to: PLLHNIKTLSLHKLFTVYGQWLG*VIHSPA
Trigger: AGCTGGCGAATGGATGACGCACCCTAGCCACTGGCC...GTAAACTGTAAAAAGTTTATGGAGACTTAAAGTCTTGATGTTGTGAAGCAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR CCA 90 bp GGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTATTGCAATCTCAGAGTCCCAGAAATaGCACAGGTGTGCTTCCTGC +
Preference number: 2 (lower is better)
Translates to: GSSLRMTVKTKPNFIIAISESQK*HRCASC
Trigger: GCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGA...GATTGCAATAATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR CCA 90 bp TTTCTTCAGTCACAGATTTTCATTTGCTCCTTAGATGACCTGGGTATGCAACCATCAGAGTCCCAGAAATaGCACAGGTGTGCTTCCTGC +
Preference number: 2 (lower is better)
Translates to: FLQSQIFICSLDDLGMQPSESQK*HRCASC
Trigger: GCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGA...TGGTTGCATACCCAGGTCATCTAAGGAGCAAATGAAAATCTGTGACTGAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
3UTR-3UTR CCA 90 bp TCTTCATTGTGCACTCATGATCACACACGAGAACAAACCAAACTTGCAGCTTTTTCAGAGTCCCAGAAATaGCACAGGTGTGCTTCCTGC +
Preference number: 2 (lower is better)
Translates to: SSLCTHDHTREQTKLAAFSESQK*HRCASC
Trigger: GCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGA...AAAAGCTGCAAGTTTGGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR TCA 90 bp AAACAGGGACTGCCAGACTCAATCTTAGAATGGAAACACAAACACACTAGCCCCGCTCACTTAGAAACCTaGCTTACGAAAAATCAGCCA +
Preference number: 2 (lower is better)
Translates to: KQGLPDSILEWKHKHTSPAHLET*LTKNQP
Trigger: TGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGC...GGGGCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTCTGGCAGTCCCTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR CCA 90 bp CCTCTGCTTCACAACATCAAGACTTTAAGTCTCCATAAACTTTTTACAGTTTACACAGAGAGGGGCCAGTaGCTAGGGTGCGTCATCCAT +
Preference number: 2 (lower is better)
Translates to: PLLHNIKTLSLHKLFTVYTERGQ*LGCVIH
Trigger: ATGGATGACGCACCCTAGCCACTGGCCCCTCTCTGT...GTAAACTGTAAAAAGTTTATGGAGACTTAAAGTCTTGATGTTGTGAAGCAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR CCA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTACAGAGAGGGGCCAGTaGCTAGGGTGCGTCATCCAT +
Preference number: 2 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFTERGQ*LGCVIH
Trigger: ATGGATGACGCACCCTAGCCACTGGCCCCTCTCTGT...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR CCA 90 bp ATGGGTAGTTGTTGCAAAGTTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCTATTTGGCTTATTTGTaGACTTTCTTGTTCCAGGAA +
Preference number: 2 (lower is better)
Translates to: MGSCCKVPVPDHTRPLCAYLAYL*TFLFQE
Trigger: TTCCTGGAACAAGAAAGTCCACAAATAAGCCAAATA...GGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAACTTTGCAACAACTACCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
3UTR-3UTR TCA 90 bp GGGAGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACCATTCTAGTGTTTCATaGAGGGGAACCGTCTGCAGA +
Preference number: 2 (lower is better)
Translates to: GSSLRNLTYEKSAIKVYNHSSVS*RGTVCR
Trigger: TCTGCAGACGGTTCCCCTTCATGAAACACTAGAATG...GTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR TCA 90 bp CAGAGAACAAGGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATGATACATCTGCAGGTTaGAGTCTTGAGCCTTGTGAA +
Preference number: 2 (lower is better)
Translates to: QRTRIVPAHDCKNQTKLYDTSAG*SLEPCE
Trigger: TTCACAAGGCTCAAGACTTCAACCTGCAGATGTATC...ATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCCTTGTTCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR TCA 90 bp CAGAGAACAAGGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTTTCACTCTAAATGCTaGTCATCTGAGCGAGCTGTC +
Preference number: 2 (lower is better)
Translates to: QRTRIVPAHDCKNQTKLYFHSKC*SSERAV
Trigger: GACAGCTCGCTCAGATGATCAGCATTTAGAGTGAAA...ATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCCTTGTTCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR TCA 90 bp GGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTATTGCAATCTCCATTCGCCAGCTTTaGACCCTGGCTCTTTCTAAT +
Preference number: 2 (lower is better)
Translates to: GSSLRMTVKTKPNFIIAISIRQL*TLALSN
Trigger: ATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGA...GATTGCAATAATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR TCA 90 bp GGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTATTGCAATCGATACATCTGCAGGTTaGAGTCTTGAGCCTTGTGAA +
Preference number: 2 (lower is better)
Translates to: GSSLRMTVKTKPNFIIAIDTSAG*SLEPCE
Trigger: TTCACAAGGCTCAAGACTTCAACCTGCAGATGTATC...GATTGCAATAATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR TCA 90 bp GGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTATTGCAATCTTCATTGTGCACTCATaGTCACACACGAGAACAAAC +
Preference number: 2 (lower is better)
Translates to: GSSLRMTVKTKPNFIIAIFIVHS*SHTRTN
Trigger: GTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAA...GATTGCAATAATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR TCA 90 bp TTTCTTCAGTCACAGATTTTCATTTGCTCCTTAGATGACCTGGGTATGCAACCATTCATTGTGCACTCATaGTCACACACGAGAACAAAC +
Preference number: 2 (lower is better)
Translates to: FLQSQIFICSLDDLGMQPFIVHS*SHTRTN
Trigger: GTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAA...TGGTTGCATACCCAGGTCATCTAAGGAGCAAATGAAAATCTGTGACTGAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
3UTR-3UTR GCA 90 bp AAACAGGGACTGCCAGACTCAATCTTAGAATGGAAACACAAACACACTAGCCCCAGAACAAACCAAACTTaGAGCTTTTTGACACAAGAA +
Preference number: 2 (lower is better)
Translates to: KQGLPDSILEWKHKHTSPRTNQT*SFLTQE
Trigger: TTCTTGTGTCAAAAAGCTGCAAGTTTGGTTTGTTCT...GGGGCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTCTGGCAGTCCCTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR TCA 90 bp CCTCTGCTTCACAACATCAAGACTTTAAGTCTCCATAAACTTTTTACAGTTTACCATTCTAGTGTTTCATaGAGGGGAACCGTCTGCAGA +
Preference number: 2 (lower is better)
Translates to: PLLHNIKTLSLHKLFTVYHSSVS*RGTVCR
Trigger: TCTGCAGACGGTTCCCCTTCATGAAACACTAGAATG...GTAAACTGTAAAAAGTTTATGGAGACTTAAAGTCTTGATGTTGTGAAGCAGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR TCA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTCATTCTAGTGTTTCATaGAGGGGAACCGTCTGCAGA +
Preference number: 2 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFHSSVS*RGTVCR
Trigger: TCTGCAGACGGTTCCCCTTCATGAAACACTAGAATG...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR TCA 90 bp CAGAGAACAAGGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATAAACTTGCAGCTTTTTaGCACAAGAACAAGACCTTT +
Preference number: 2 (lower is better)
Translates to: QRTRIVPAHDCKNQTKLYKLAAF*HKNKTF
Trigger: AAAGGTCTTGTTCTTGTGTCAAAAAGCTGCAAGTTT...ATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCCTTGTTCTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR CCA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTTCCAATGTCCACAGCTaGATCAATCAGAGTCCCAGA +
Preference number: 2 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFSNVHS*INQSPR
Trigger: TCTGGGACTCTGATTGATCCAGCTGTGGACATTGGA...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR CCA 90 bp CAGAGAACAAGGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATGACTCAATCTTAGAATaGAAACACAAACACACTAGC +
Preference number: 2 (lower is better)
Translates to: QRTRIVPAHDCKNQTKLYDSILE*KHKHTS
Trigger: GCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTC...ATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCCTTGTTCTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR CAA 90 bp CTTCTTCATTGTGCACTCATGATCACACACGAGAACAAACCAAACTaGCAGCTTTTTGACACAAGAACAAGACCTTTTAAAGGAACTTCT +
Preference number: 2 (lower is better)
Translates to: LLHCALMITHENKPN*QLFDTRTRPFKGTS
Trigger: AGAAGTTCCTTTAAAAGGTCTTGTTCTTGTGTCAAAAAGCTGCAAGTTTGGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR TCA 90 bp CCTCTGCTTCACAACATCAAGACTTTAAGTCTCCATAAACTTTTTACAGTTTACTTTCACTCTAAATGCTaGTCATCTGAGCGAGCTGTC +
Preference number: 2 (lower is better)
Translates to: PLLHNIKTLSLHKLFTVYFHSKC*SSERAV
Trigger: GACAGCTCGCTCAGATGATCAGCATTTAGAGTGAAA...GTAAACTGTAAAAAGTTTATGGAGACTTAAAGTCTTGATGTTGTGAAGCAGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR TCA 90 bp CCTCTGCTTCACAACATCAAGACTTTAAGTCTCCATAAACTTTTTACAGTTTACTCTAATGTTCACCCATaGAGGGCCCTTGTTTTCACT +
Preference number: 2 (lower is better)
Translates to: PLLHNIKTLSLHKLFTVYSNVHP*RALVFT
Trigger: AGTGAAAACAAGGGCCCTTCATGGGTGAACATTAGA...GTAAACTGTAAAAAGTTTATGGAGACTTAAAGTCTTGATGTTGTGAAGCAGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR GCA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTGGGTCTTCTTCATTGTaGACTCATGATCACACACGA +
Preference number: 2 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFGSSSL*THDHTR
Trigger: TCGTGTGTGATCATGAGTGCACAATGAAGAAGACCC...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR GCA 90 bp TTTCTTCAGTCACAGATTTTCATTTGCTCCTTAGATGACCTGGGTATGCAACCACCACAAAATAACCTCTaGTTCACAACATCAAGACTT +
Preference number: 2 (lower is better)
Translates to: FLQSQIFICSLDDLGMQPPQNNL*FTTSRL
Trigger: AAGTCTTGATGTTGTGAAGCAGAGGTTATTTTGTGG...TGGTTGCATACCCAGGTCATCTAAGGAGCAAATGAAAATCTGTGACTGAAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
3UTR-3UTR GCA 90 bp GGGAGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACAGAACAAACCAAACTTaGAGCTTTTTGACACAAGAA +
Preference number: 2 (lower is better)
Translates to: GSSLRNLTYEKSAIKVYNRTNQT*SFLTQE
Trigger: TTCTTGTGTCAAAAAGCTGCAAGTTTGGTTTGTTCT...GTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCTCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR TCA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTAAACTTGCAGCTTTTTaGCACAAGAACAAGACCTTT +
Preference number: 2 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFKLAAF*HKNKTF
Trigger: AAAGGTCTTGTTCTTGTGTCAAAAAGCTGCAAGTTT...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR CCA 90 bp CCTCTGCTTCACAACATCAAGACTTTAAGTCTCCATAAACTTTTTACAGTTTACGACTCAATCTTAGAATaGAAACACAAACACACTAGC +
Preference number: 2 (lower is better)
Translates to: PLLHNIKTLSLHKLFTVYDSILE*KHKHTS
Trigger: GCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTC...GTAAACTGTAAAAAGTTTATGGAGACTTAAAGTCTTGATGTTGTGAAGCAGAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR GCA 90 bp CCTCTGCTTCACAACATCAAGACTTTAAGTCTCCATAAACTTTTTACAGTTTACAGAACAAACCAAACTTaGAGCTTTTTGACACAAGAA +
Preference number: 2 (lower is better)
Translates to: PLLHNIKTLSLHKLFTVYRTNQT*SFLTQE
Trigger: TTCTTGTGTCAAAAAGCTGCAAGTTTGGTTTGTTCT...GTAAACTGTAAAAAGTTTATGGAGACTTAAAGTCTTGATGTTGTGAAGCAGAGG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR CAA 90 bp AGGCTGAGCAAGCCATTCCACAGGGGACGCACAGCCTCAGGGCTGCGACCCCACTTCCTGCTCCACTCCTaGCTGCTGGCTAGACACCTG +
Preference number: 3 (lower is better)
Translates to: RLSKPFHRGRTASGLRPHFLLHS*LLARHL
Trigger: CAGGTGTCTAGCCAGCAGCAAGGAGTGGAGCAGGAA...GTGGGGTCGCAGCCCTGAGGCTGTGCGTCCCCTGTGGAATGGCTTGCTCAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488558.2
3UTR TCA 72 bp GACGATGAGTGCTATGTGCTCAGGAGGCCGGGAGGCTaGGCAAGCCATTCCACAGGGGACGCACAGCCTCAG +
Preference number: 3 (lower is better)
Translates to: DDECYVLRRPGG*ASHSTGDAQPQ
Trigger: CTGAGGCTGTGCGTCCCCTGTGGAATGGCTTGCTCAGCCTCCCGGCCTCCTGAGCACATAGCACTCATCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488558.2
3UTR GCA 72 bp GGTGAGACCGGACACAGCTTTTGTCCAAAGTCGGCTTaGAGGAGGCGGCAGGATTCAGCGCCATGGGGTGGC +
Preference number: 3 (lower is better)
Translates to: GETGHSFCPKSA*RRRQDSAPWGG
Trigger: GCCACCCCATGGCGCTGAATCCTGCCGCCTCCTGCAAGCCGACTTTGGACAAAAGCTGTGTCCGGTCTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488558.2
3UTR GCA 72 bp CCACGGGCAGCAGGCAGTCTTTCTCCGAGTTTCAACTaGAGCGCTGGAAAGAGCCGCTCCAGGCTCAACCTC +
Preference number: 3 (lower is better)
Translates to: PRAAGSLSPSFN*SAGKSRSRLNL
Trigger: GAGGTTGAGCCTGGAGCGGCTCTTTCCAGCGCTGCAGTTGAAACTCGGAGAAAGACTGCCTGCTGCCCGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488558.2
3UTR TCA 72 bp CCCTGGTGTATACAGTCCCCGAAAGATGACGGACGATaGGTGCTATGTGCTCAGGAGGCCGGGAGGCTGAGC +
Preference number: 3 (lower is better)
Translates to: PWCIQSPKDDGR*VLCAQEAGRLS
Trigger: GCTCAGCCTCCCGGCCTCCTGAGCACATAGCACTCATCGTCCGTCATCTTTCGGGGACTGTATACACCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488558.2
3UTR GCA 72 bp CAGCCGCCTGTCCGAGCTTCCTGCTCCACTCCTTGCTaGTGGCTAGACACCTGGTGTTTCAAGGCTAAGACC +
Preference number: 3 (lower is better)
Translates to: QPPVRASCSTPC*WLDTWCFKAKT
Trigger: GGTCTTAGCCTTGAAACACCAGGTGTCTAGCCAGCAGCAAGGAGTGGAGCAGGAAGCTCGGACAGGCGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488558.2
3UTR CCA 72 bp AGCAGGCAGTCTTTCTCCGAGTTTCAACTGCAGCGCTaGAAAGAGCCGCTCCAGGCTCAACCTCCAGTCGTC +
Preference number: 3 (lower is better)
Translates to: SRQSFSEFQLQR*KEPLQAQPPVV
Trigger: GACGACTGGAGGTTGAGCCTGGAGCGGCTCTTTCCAGCGCTGCAGTTGAAACTCGGAGAAAGACTGCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488558.2
3UTR CCA 72 bp GCTTCCTGCTCCACTCCTTGCTGCTGGCTAGACACCTaGTGTTTCAAGGCTAAGACCCACCTGGACTCCTAC +
Preference number: 3 (lower is better)
Translates to: ASCSTPCCWLDT*CFKAKTHLDSY
Trigger: GTAGGAGTCCAGGTGGGTCTTAGCCTTGAAACACCAGGTGTCTAGCCAGCAGCAAGGAGTGGAGCAGGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488558.2
3UTR-3UTR CAA 90 bp TTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCACGCCGAGTTCCTGTGTATAGAAGAGAGGATCGCTaGAGCCCAGAAGGTAGAGGC +
Preference number: 3 (lower is better)
Translates to: FQFLITHGPFVPRRVPVYRREDR*SPEGRG
Trigger: GCCTCTACCTTCTGGGCTCAAGCGATCCTCTCTTCT...ATACACAGGAACTCGGCGTGGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
3UTR CCA 72 bp GCCACCTCCCTTCCTTCGCCTTCCAATGTCCACAGCTaGATCAATCAGAGTCCCAGAAATGGCACAGGTGTG +
Preference number: 3 (lower is better)
Translates to: ATSLPSPSNVHS*INQSPRNGTGV
Trigger: CACACCTGTGCCATTTCTGGGACTCTGATTGATCCAGCTGTGGACATTGGAAGGCGAAGGAAGGGAGGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR CCA 72 bp TGGAAACAGGATCTCCCTATGGTGCTCAGGATGGTCTaGAACTCAGGCTCAAACGATCCTCCCACCTTGCCC +
Preference number: 3 (lower is better)
Translates to: WKQDLPMVLRMV*NSGSNDPPTLP
Trigger: GGGCAAGGTGGGAGGATCGTTTGAGCCTGAGTTCCAGACCATCCTGAGCACCATAGGGAGATCCTGTTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
3UTR TCA 72 bp CCAAACCCTAAAACAGAGATTCACAAGGAACTCAGCTaGCGAACAGACGCAGCAGGGCGGACACCATGGCCT +
Preference number: 3 (lower is better)
Translates to: PNPKTEIHKELS*RTDAAGRTPWP
Trigger: AGGCCATGGTGTCCGCCCTGCTGCGTCTGTTCGTCAGCTGAGTTCCTTGTGAATCTCTGTTTTAGGGTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR GCA 72 bp GAAATACATGAAACAGAGAGGGGCCAGTGGCTAGGGTaGGTCATCCATTCGCCAGCTTTGAACCCTGGCTCT +
Preference number: 3 (lower is better)
Translates to: EIHETERGQWLG*VIHSPALNPGS
Trigger: AGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCTAGCCACTGGCCCCTCTCTGTTTCATGTATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR CCA 72 bp GCTAGGGTGCGTCATCCATTCGCCAGCTTTGAACCCTaGCTCTTTCTAATGTTCACCCATGAAGGGCCCTTG +
Preference number: 3 (lower is better)
Translates to: ARVRHPFASFEP*LFLMFTHEGPL
Trigger: CAAGGGCCCTTCATGGGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR CAA 90 bp TTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCACGCCGAGTTCCTGTGTATCTAGGGTCTTCTTCATaGTGCACTCATGATCACACA +
Preference number: 3 (lower is better)
Translates to: FQFLITHGPFVPRRVPVYLGSSS*CTHDHT
Trigger: TGTGTGATCATGAGTGCACAATGAAGAAGACCCTAG...ATACACAGGAACTCGGCGTGGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
3UTR-3UTR CAA 90 bp ATGGGTAGTTGTTGCAAAGTTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCGGAAAGAATAATCACTaGAGAGGGGACAGGTGCTCC +
Preference number: 3 (lower is better)
Translates to: MGSCCKVPVPDHTRPLCAGKNNH*RGDRCS
Trigger: GGAGCACCTGTCCCCTCTCAAGTGATTATTCTTTCC...GGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAACTTTGCAACAACTACCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
3UTR TCA 72 bp AGAGTCCCAGAAATGGCACAGGTGTGCTTCCTGCTCTaGGGGTACATTCTAGTGTTTCATGAAGGGGAACCG +
Preference number: 3 (lower is better)
Translates to: RVPEMAQVCFLL*GYILVFHEGEP
Trigger: CGGTTCCCCTTCATGAAACACTAGAATGTACCCTCAGAGCAGGAAGCACACCTGTGCCATTTCTGGGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR GCA 72 bp TCAAGGTGGCCCAAACTTCTGAGCATGGGTAGTTGTTaGAAAGTTCCAGTTCCTGATCACACACGGCCCCTT +
Preference number: 3 (lower is better)
Translates to: SRWPKLLSMGSC*KVPVPDHTRPL
Trigger: AAGGGGCCGTGTGTGATCAGGAACTGGAACTTTGCAACAACTACCCATGCTCAGAAGTTTGGGCCACCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
3UTR CCA 72 bp CAATGTCCACAGCTGGATCAATCAGAGTCCCAGAAATaGCACAGGTGTGCTTCCTGCTCTGAGGGTACATTC +
Preference number: 3 (lower is better)
Translates to: QCPQLDQSESQK*HRCASCSEGTF
Trigger: GAATGTACCCTCAGAGCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGATTGATCCAGCTGTGGACATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR CAA 90 bp TTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCATGAAGGGCCCTTGCTGCAGGTTGAAGTCTaGAGCCTTGTGAAAGATGAC +
Preference number: 3 (lower is better)
Translates to: FASFEPWLFLMFTHEGPLLQVEV*SLVKDD
Trigger: GTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAG...CAAGGGCCCTTCATGGGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR CCA 72 bp CAACTTTTGGAAATACATGAAACAGAGAGGGGCCAGTaGCTAGGGTGCGTCATCCATTCGCCAGCTTTGAAC +
Preference number: 3 (lower is better)
Translates to: QLLEIHETERGQ*LGCVIHSPALN
Trigger: GTTCAAAGCTGGCGAATGGATGACGCACCCTAGCCACTGGCCCCTCTCTGTTTCATGTATTTCCAAAAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR TCA 72 bp AATAATCACTTGAGAGGGGACAGGTGCTCCCTGCTCTaGCTTCTGTCTAGTGCACTAGTAGTCAAAGCTGCT +
Preference number: 3 (lower is better)
Translates to: NNHLRGDRCSLL*LLSSALVVKAA
Trigger: AGCAGCTTTGACTACTAGTGCACTAGACAGAAGTCAGAGCAGGGAGCACCTGTCCCCTCTCAAGTGATTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
3UTR CCA 72 bp ACGGCCCCTTTGTGCCACGCCGAGTTCCTGTGTATTTaGCTTATTTGTGGACTTTCTTGTTCCAGGAATCTT +
Preference number: 3 (lower is better)
Translates to: TAPLCHAEFLCI*LICGLSCSRNL
Trigger: AAGATTCCTGGAACAAGAAAGTCCACAAATAAGCCAAATACACAGGAACTCGGCGTGGCACAAAGGGGCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
3UTR-3UTR CAA 90 bp TTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCACGCCGAGTTCCTGTGTATTTGTGTCTGGTTAACTaGGTGAATTCTTTCTTCAGT +
Preference number: 3 (lower is better)
Translates to: FQFLITHGPFVPRRVPVYLCLVN*VNSFFS
Trigger: ACTGAAGAAAGAATTCACCAAGTTAACCAGACACAA...ATACACAGGAACTCGGCGTGGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
3UTR-3UTR CAA 90 bp AAACAGGGACTGCCAGACTCAATCTTAGAATGGAAACACAAACACACTAGCCCCCTAGGGTCTTCTTCATaGTGCACTCATGATCACACA +
Preference number: 3 (lower is better)
Translates to: KQGLPDSILEWKHKHTSPLGSSS*CTHDHT
Trigger: TGTGTGATCATGAGTGCACAATGAAGAAGACCCTAG...GGGGCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTCTGGCAGTCCCTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR TCA 72 bp ATGGCCTTGGCACCTCAGGGAGCTCACTTAGAAACCTaGCTTACGAAAAATCAGCCATCAAAGTTTACAACT +
Preference number: 3 (lower is better)
Translates to: MALAPQGAHLET*LTKNQPSKFTT
Trigger: AGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCTCCCTGAGGTGCCAAGGCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR CAA 90 bp GGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTATTGCAATCCTGCAGGTTGAAGTCTaGAGCCTTGTGAAAGATGAC +
Preference number: 3 (lower is better)
Translates to: GSSLRMTVKTKPNFIIAILQVEV*SLVKDD
Trigger: GTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAG...GATTGCAATAATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR CAA 90 bp TTTCTTCAGTCACAGATTTTCATTTGCTCCTTAGATGACCTGGGTATGCAACCACTGCAGGTTGAAGTCTaGAGCCTTGTGAAAGATGAC +
Preference number: 3 (lower is better)
Translates to: FLQSQIFICSLDDLGMQPLQVEV*SLVKDD
Trigger: GTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAG...TGGTTGCATACCCAGGTCATCTAAGGAGCAAATGAAAATCTGTGACTGAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
3UTR-3UTR CAA 90 bp TCTTCATTGTGCACTCATGATCACACACGAGAACAAACCAAACTTGCAGCTTTTCTGCAGGTTGAAGTCTaGAGCCTTGTGAAAGATGAC +
Preference number: 3 (lower is better)
Translates to: SSLCTHDHTREQTKLAAFLQVEV*SLVKDD
Trigger: GTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAG...AAAAGCTGCAAGTTTGGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR TCA 72 bp AATGCAGCATCTAGGGTCTTCTTCATTGTGCACTCATaGTCACACACGAGAACAAACCAAACTTGCAGCTTT +
Preference number: 3 (lower is better)
Translates to: NAASRVFFIVHS*SHTRTNQTCSF
Trigger: AAAGCTGCAAGTTTGGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAGACCCTAGATGCTGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR CAA 90 bp GGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTATTGCAATCCTAGGGTCTTCTTCATaGTGCACTCATGATCACACA +
Preference number: 3 (lower is better)
Translates to: GSSLRMTVKTKPNFIIAILGSSS*CTHDHT
Trigger: TGTGTGATCATGAGTGCACAATGAAGAAGACCCTAG...GATTGCAATAATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR-3UTR CAA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTCAAACTTGCAGCTTTTaGACACAAGAACAAGACCTT +
Preference number: 3 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFQTCSF*TQEQDL
Trigger: AAGGTCTTGTTCTTGTGTCAAAAAGCTGCAAGTTTG...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR TCA 72 bp AAGGTTTTACATCTTAAGATACTGTATAGCAAAATGTaGGAATCAACAGAACTTTCACTTATTCAGGGCCTG +
Preference number: 3 (lower is better)
Translates to: KVLHLKILYSKM*ESTELSLIQGL
Trigger: CAGGCCCTGAATAAGTGAAAGTTCTGTTGATTCTCACATTTTGCTATACAGTATCTTAAGATGTAAAACCTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR GCA 90 bp AAGCCATTCCACAGGGGACGCACAGCCTCAGGGCTGCGACCCCACGGGCAGCAGCGAGCGCCGAGAAGCTaGCCTTCCGCGGGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: KPFHRGRTASGLRPHGQQRAPRS*PSAGPR
Trigger: ACGAGGCCCCGCGGAAGGGCAGCTTCTCGGCGCTCG...CTGCTGCCCGTGGGGTCGCAGCCCTGAGGCTGTGCGTCCCCTGTGGAATGGCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488558.2
CDS-3UTR TCA 90 bp CATTCCACAGGGGACGCACAGCCTCAGGGCTGCGACCCCACGGGCAGCAGGCAGAGGAGGCCGGGAGGCTaGGCAAGCCATTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: HSTGDAQPQGCDPTGSRQRRPGG*ASHSTG
Trigger: CCCTGTGGAATGGCTTGCTCAGCCTCCCGGCCTCCT...CTGCCTGCTGCCCGTGGGGTCGCAGCCCTGAGGCTGTGCGTCCCCTGTGGAATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488558.2
CDS-3UTR GCA 90 bp CGCAGCAGGGCGGACACCATGGCCTTGGCACCTCAGGGAGCTCACTTAGAAACCTGCAGCAGCGCCTGCTaGCCGCCCCTCACCCGGCTG +
Preference number: 4 (lower is better)
Translates to: RSRADTMALAPQGAHLETCSSAC*PPLTRL
Trigger: CAGCCGGGTGAGGGGCGGGCAGCAGGCGCTGCTGCA...GGTTTCTAAGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGCTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp GGGCAGCAGGCAGTCTTTCTCCGAGTTTCAACTGCAGCGCTGGAAAGAGCCGCTGGGCCGCGGGCTTGGTaGGGCCGTTGGTGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: GQQAVFLRVSTAALERAAGPRAW*GRWCGP
Trigger: TGGGCCGCACCAACGGCCTCACCAAGCCCGCGGCCC...AGCGGCTCTTTCCAGCGCTGCAGTTGAAACTCGGAGAAAGACTGCCTGCTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488558.2
CDS-3UTR CCA 90 bp ATTCCACAGGGGACGCACAGCCTCAGGGCTGCGACCCCACGGGCAGCAGGCAGTTCAGCAGAGGACATGTaGGGTCCGTGGCCGCGAACG +
Preference number: 4 (lower is better)
Translates to: IPQGTHSLRAATPRAAGSSAEDM*GPWPRT
Trigger: CGTTCGCGGCCACGGACCCCACATGTCCTCTGCTGA...ACTGCCTGCTGCCCGTGGGGTCGCAGCCCTGAGGCTGTGCGTCCCCTGTGGAAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488558.2
CDS-3UTR GCA 90 bp CGCAGCAGGGCGGACACCATGGCCTTGGCACCTCAGGGAGCTCACTTAGAAACCGCCCGCTGTGGGCGGTaGTGTGTCGGATGGACGCTG +
Preference number: 4 (lower is better)
Translates to: RSRADTMALAPQGAHLETARCGR*CVGWTL
Trigger: CAGCGTCCATCCGACACAGCACCGCCCACAGCGGGC...GGTTTCTAAGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGCTGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375441.7
CDS-3UTR GCA 90 bp CATTCCACAGGGGACGCACAGCCTCAGGGCTGCGACCCCACGGGCAGCAGGCAGTGCTCCACTCCTTGCTaGTGGCTAGACACCTGGTGT +
Preference number: 4 (lower is better)
Translates to: HSTGDAQPQGCDPTGSRQCSTPC*WLDTWC
Trigger: ACACCAGGTGTCTAGCCAGCAGCAAGGAGTGGAGCA...CTGCCTGCTGCCCGTGGGGTCGCAGCCCTGAGGCTGTGCGTCCCCTGTGGAATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488558.2
CDS-3UTR GCA 90 bp ATTCCACAGGGGACGCACAGCCTCAGGGCTGCGACCCCACGGGCAGCAGGCAGTACGATGAGTGCTATGTaGTCAGGAGGCCGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: IPQGTHSLRAATPRAAGSTMSAM*SGGREA
Trigger: AGCCTCCCGGCCTCCTGAGCACATAGCACTCATCGT...ACTGCCTGCTGCCCGTGGGGTCGCAGCCCTGAGGCTGTGCGTCCCCTGTGGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488558.2
CDS-3UTR GCA 90 bp AGCAGGCAGTCTTTCTCCGAGTTTCAACTGCAGCGCTGGAAAGAGCCGCTCCAGGCCCGCACCGCCTCGTaGAGCTTCCGCCACGTGTCC +
Preference number: 4 (lower is better)
Translates to: SRQSFSEFQLQRWKEPLQARTAS*SFRHVS
Trigger: GGACACGTGGCGGAAGCTGCACGAGGCGGTGCGGGC...CTGGAGCGGCTCTTTCCAGCGCTGCAGTTGAAACTCGGAGAAAGACTGCCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488558.2
CDS-3UTR TCA 90 bp AGGCTGAGCAAGCCATTCCACAGGGGACGCACAGCCTCAGGGCTGCGACCCCACCTGTCTTCACCCTCATaGCCAAAGTCAGCCGCCTGT +
Preference number: 4 (lower is better)
Translates to: RLSKPFHRGRTASGLRPHLSSPS*PKSAAC
Trigger: ACAGGCGGCTGACTTTGGTCATGAGGGTGAAGACAG...GTGGGGTCGCAGCCCTGAGGCTGTGCGTCCCCTGTGGAATGGCTTGCTCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488558.2
CDS-3UTR GCA 90 bp CATCTGCAGGTTGAAGTCTTGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCCTGCAGCAGCGCCTGCTaGCCGCCCCTCACCCGGCTG +
Preference number: 4 (lower is better)
Translates to: HLQVEVLSLVKDDPGATSCSSAC*PPLTRL
Trigger: CAGCCGGGTGAGGGGCGGGCAGCAGGCGCTGCTGCA...GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp CGCAGCAGGGCGGACACCATGGCCTTGGCACCTCAGGGAGCTCACTTAGAAACCGGCCAGTGGCTAGGGTaGGTCATCCATTCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: RSRADTMALAPQGAHLETGQWLG*VIHSPA
Trigger: AGCTGGCGAATGGATGACGCACCCTAGCCACTGGCC...GGTTTCTAAGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp CGCAGCAGGGCGGACACCATGGCCTTGGCACCTCAGGGAGCTCACTTAGAAACCCACACGGCCCCTTTGTaGCACGCCGAGTTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: RSRADTMALAPQGAHLETHTAPL*HAEFLC
Trigger: ACACAGGAACTCGGCGTGGCACAAAGGGGCCGTGTG...GGTTTCTAAGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CCA 90 bp ATTCCACAGGGGACGCACAGCCTCAGGGCTGCGACCCCACGGGCAGCAGGCAGTTCCACTCCTTGCTGCTaGCTAGACACCTGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: IPQGTHSLRAATPRAAGSSTPCC*LDTWCF
Trigger: GAAACACCAGGTGTCTAGCCAGCAGCAAGGAGTGGA...ACTGCCTGCTGCCCGTGGGGTCGCAGCCCTGAGGCTGTGCGTCCCCTGTGGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488558.2
CDS-3UTR CCA 90 bp GTGGCCGCGAACGCTGCTGAGGAAAGGCCCCAGAACCCCTGGTGTATACAGTCCCAGGATTCAGCGCCATaGGGTGGCCACAGAGGACAC +
Preference number: 4 (lower is better)
Translates to: VAANAAEERPQNPWCIQSQDSAP*GGHRGH
Trigger: GTGTCCTCTGTGGCCACCCCATGGCGCTGAATCCTG...GGACTGTATACACCAGGGGTTCTGGGGCCTTTCCTCAGCAGCGTTCGCGGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488558.2
CDS-3UTR TCA 90 bp ATTCCACAGGGGACGCACAGCCTCAGGGCTGCGACCCCACGGGCAGCAGGCAGTAAAGATGACGGACGATaGGTGCTATGTGCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: IPQGTHSLRAATPRAAGSKDDGR*VLCAQE
Trigger: CTCCTGAGCACATAGCACTCATCGTCCGTCATCTTT...ACTGCCTGCTGCCCGTGGGGTCGCAGCCCTGAGGCTGTGCGTCCCCTGTGGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488558.2
CDS-3UTR GCA 90 bp AAGCCATTCCACAGGGGACGCACAGCCTCAGGGCTGCGACCCCACGGGCAGCAGAAACGGAAGGATCTGTaGCTGGACGTGGTCTTCACA +
Preference number: 4 (lower is better)
Translates to: KPFHRGRTASGLRPHGQQKRKDL*LDVVFT
Trigger: TGTGAAGACCACGTCCAGGCACAGATCCTTCCGTTT...CTGCTGCCCGTGGGGTCGCAGCCCTGAGGCTGTGCGTCCCCTGTGGAATGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488558.2
CDS-3UTR GCA 90 bp CGCAGCAGGGCGGACACCATGGCCTTGGCACCTCAGGGAGCTCACTTAGAAACCGGAACCGTCTGCAGATaGGTCAGGCCACGTAGTGGT +
Preference number: 4 (lower is better)
Translates to: RSRADTMALAPQGAHLETGTVCR*VRPRSG
Trigger: ACCACTACGTGGCCTGACGCATCTGCAGACGGTTCC...GGTTTCTAAGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp CATTCCACAGGGGACGCACAGCCTCAGGGCTGCGACCCCACGGGCAGCAGGCAGAATGATTTTGGCAGATaGAGGGCAGCGTGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: HSTGDAQPQGCDPTGSRQNDFGR*RAAWSS
Trigger: AGAACTCCACGCTGCCCTCCATCTGCCAAAATCATT...CTGCCTGCTGCCCGTGGGGTCGCAGCCCTGAGGCTGTGCGTCCCCTGTGGAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488558.2
CDS-3UTR CCA 90 bp ATTCCACAGGGGACGCACAGCCTCAGGGCTGCGACCCCACGGGCAGCAGGCAGTTGCTGGCTAGACACCTaGTGTTTCAAGGCTAAGACC +
Preference number: 4 (lower is better)
Translates to: IPQGTHSLRAATPRAAGSCWLDT*CFKAKT
Trigger: GGTCTTAGCCTTGAAACACCAGGTGTCTAGCCAGCA...ACTGCCTGCTGCCCGTGGGGTCGCAGCCCTGAGGCTGTGCGTCCCCTGTGGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488558.2
CDS-3UTR TCA 90 bp TGGCTAGACACCTGGTGTTTCAAGGCTAAGACCCACCTGGACTCCTACGTTCACGGCCGCGAACGCTGCTaGGGAAAGGCCCCAGAACCC +
Preference number: 4 (lower is better)
Translates to: WLDTWCFKAKTHLDSYVHGRERC*GKAPEP
Trigger: GGGTTCTGGGGCCTTTCCTCAGCAGCGTTCGCGGCC...GTGAACGTAGGAGTCCAGGTGGGTCTTAGCCTTGAAACACCAGGTGTCTAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488558.2
CDS-3UTR GCA 90 bp AATCAGAGTCCCAGAAATGGCACAGGTGTGCTTCCTGCTCTGAGGGTACATTCTTGCAGCAGCGCCTGCTaGCCGCCCCTCACCCGGCTG +
Preference number: 4 (lower is better)
Translates to: NQSPRNGTGVLPALRVHSCSSAC*PPLTRL
Trigger: CAGCCGGGTGAGGGGCGGGCAGCAGGCGCTGCTGCA...AGAATGTACCCTCAGAGCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp CGCAGCAGGGCGGACACCATGGCCTTGGCACCTCAGGGAGCTCACTTAGAAACCGGGACAGGTGCTCCCTaGTCTGACTTCTGTCTAGTG +
Preference number: 4 (lower is better)
Translates to: RSRADTMALAPQGAHLETGTGAP*SDFCLV
Trigger: CACTAGACAGAAGTCAGAGCAGGGAGCACCTGTCCC...GGTTTCTAAGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR GCA 90 bp GTGGCCGCGAACGCTGCTGAGGAAAGGCCCCAGAACCCCTGGTGTATACAGTCCTCTCCGAGTTTCAACTaGAGCGCTGGAAAGAGCCGC +
Preference number: 4 (lower is better)
Translates to: VAANAAEERPQNPWCIQSSPSFN*SAGKSR
Trigger: GCGGCTCTTTCCAGCGCTGCAGTTGAAACTCGGAGA...GGACTGTATACACCAGGGGTTCTGGGGCCTTTCCTCAGCAGCGTTCGCGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488558.2
CDS-3UTR CCA 90 bp CATCTGCAGGTTGAAGTCTTGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCCGCTGCCCTCACTTGCTaGCACGTGTGGCCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: HLQVEVLSLVKDDPGATSAALTC*HVWPRS
Trigger: GGAGCGCGGCCACACGTGCCAGCAAGTGAGGGCAGC...GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375441.7
CDS-3UTR TCA 90 bp CGCAGCAGGGCGGACACCATGGCCTTGGCACCTCAGGGAGCTCACTTAGAAACCGGTCCACCTTGTCCTTaGAGTCCAACAGGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: RSRADTMALAPQGAHLETGPPCP*SPTGLG
Trigger: TCCAAGACCTGTTGGACTTCAAGGACAAGGTGGACC...GGTTTCTAAGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp AATCAGAGTCCCAGAAATGGCACAGGTGTGCTTCCTGCTCTGAGGGTACATTCTGCCCGCACCGCCTCGTaGAGCTTCCGCCACGTGTCC +
Preference number: 4 (lower is better)
Translates to: NQSPRNGTGVLPALRVHSARTAS*SFRHVS
Trigger: GGACACGTGGCGGAAGCTGCACGAGGCGGTGCGGGC...AGAATGTACCCTCAGAGCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp AGGGTGCGTCATCCATTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCATGGAGGTGCTGCTCTaGACGGCCCGCACCGCCTCG +
Preference number: 4 (lower is better)
Translates to: RVRHPFASFEPWLFLMFTMEVLL*TARTAS
Trigger: CGAGGCGGTGCGGGCCGTGCAGAGCAGCACCTCCAT...GGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp GAGTTTCAACTGCAGCGCTGGAAAGAGCCGCTCCAGGCTCAACCTCCAGTCGTCGGAAGGATCTGTGCCTaGACGTGGTCTTCACAGGCC +
Preference number: 4 (lower is better)
Translates to: EFQLQRWKEPLQAQPPVVGRICA*TWSSQA
Trigger: GGCCTGTGAAGACCACGTCCAGGCACAGATCCTTCC...GACGACTGGAGGTTGAGCCTGGAGCGGCTCTTTCCAGCGCTGCAGTTGAAACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488558.2
CDS-3UTR CCA 90 bp CGCAGCAGGGCGGACACCATGGCCTTGGCACCTCAGGGAGCTCACTTAGAAACCCAGACCTCGATCACGTaGTCCACCTTGTCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: RSRADTMALAPQGAHLETQTSIT*STLSLK
Trigger: CTTCAAGGACAAGGTGGACCACGTGATCGAGGTCTG...GGTTTCTAAGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp CGCAGCAGGGCGGACACCATGGCCTTGGCACCTCAGGGAGCTCACTTAGAAACCATCCCATATCCCAGATaGAGGGCAGCGTGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: RSRADTMALAPQGAHLETIPYPR*RAAWSS
Trigger: AGAACTCCACGCTGCCCTCCATCTGGGATATGGGAT...GGTTTCTAAGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp CAGCTTTTGTCCAAAGTCGGCTTGCAGGAGGCGGCAGGATTCAGCGCCATGGGGTTTCAACTGCAGCGCTaGAAAGAGCCGCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: QLLSKVGLQEAAGFSAMGFQLQR*KEPLQA
Trigger: AGCCTGGAGCGGCTCTTTCCAGCGCTGCAGTTGAAA...CCCCATGGCGCTGAATCCTGCCGCCTCCTGCAAGCCGACTTTGGACAAAAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488558.2
CDS-3UTR TCA 90 bp CATCTGCAGGTTGAAGTCTTGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCCCGCCCCTCACCCGGCTaGACAGCTGGTACATCTGTG +
Preference number: 4 (lower is better)
Translates to: HLQVEVLSLVKDDPGATSRPSPG*TAGTSV
Trigger: CACAGATGTACCAGCTGTTCAGCCGGGTGAGGGGCG...GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp CGCAGCAGGGCGGACACCATGGCCTTGGCACCTCAGGGAGCTCACTTAGAAACCAAAGCTCCATGTCCTTaGACATGCCTTCCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: RSRADTMALAPQGAHLETKAPCP*TCLPAC
Trigger: GCAAGCTGGAAGGCATGTTCAAGGACATGGAGCTTT...GGTTTCTAAGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGCTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp TTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCACGCCGAGTTCCTGTGTATAGGCGGAGGGTGCAGTaGGCTGAGATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: FQFLITHGPFVPRRVPVYRRRVQ*AEIAPL
Trigger: CAGTGGTGCAATCTCAGCTCACTGCACCCTCCGCCT...ATACACAGGAACTCGGCGTGGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR GCA 90 bp CGCAGCAGGGCGGACACCATGGCCTTGGCACCTCAGGGAGCTCACTTAGAAACCAAACGGAAGGATCTGTaGCTGGACGTGGTCTTCACA +
Preference number: 4 (lower is better)
Translates to: RSRADTMALAPQGAHLETKRKDL*LDVVFT
Trigger: TGTGAAGACCACGTCCAGGCACAGATCCTTCCGTTT...GGTTTCTAAGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGCTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp TTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCACGCCGAGTTCCTGTGTATGCAGGTCAGACAGCATaGCCAGGAGGCTCCGCAACA +
Preference number: 4 (lower is better)
Translates to: FQFLITHGPFVPRRVPVYAGQTA*PGGSAT
Trigger: TGTTGCGGAGCCTCCTGGGCATGCTGTCTGACCTGC...ATACACAGGAACTCGGCGTGGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR GCA 90 bp ATGGGTAGTTGTTGCAAAGTTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCTACTCGCTCCAGTGCTaGAGCAGCGCCTGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: MGSCCKVPVPDHTRPLCAYSLQC*SSACCP
Trigger: CGGGCAGCAGGCGCTGCTGCAGCACTGGAGCGAGTA...GGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAACTTTGCAACAACTACCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR GCA 90 bp CGCAGCAGGGCGGACACCATGGCCTTGGCACCTCAGGGAGCTCACTTAGAAACCGGGACTGCAGCGTTCTaGGCAATTCACTATCCTCTA +
Preference number: 4 (lower is better)
Translates to: RSRADTMALAPQGAHLETGTAAF*AIHYPL
Trigger: TAGAGGATAGTGAATTGCGCAGAACGCTGCAGTCCC...GGTTTCTAAGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGCTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp CGCAGCAGGGCGGACACCATGGCCTTGGCACCTCAGGGAGCTCACTTAGAAACCAGGATCTCCCTATGGTaGTCAGGATGGTCTGGAACT +
Preference number: 4 (lower is better)
Translates to: RSRADTMALAPQGAHLETRISLW*SGWSGT
Trigger: AGTTCCAGACCATCCTGAGCACCATAGGGAGATCCT...GGTTTCTAAGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGCTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CCA 90 bp GAGTTTCAACTGCAGCGCTGGAAAGAGCCGCTCCAGGCTCAACCTCCAGTCGTCAGATGGAGGGCAGCGTaGAGTTCTGCAGCACATAGG +
Preference number: 4 (lower is better)
Translates to: EFQLQRWKEPLQAQPPVVRWRAA*SSAAHR
Trigger: CCTATGTGCTGCAGAACTCCACGCTGCCCTCCATCT...GACGACTGGAGGTTGAGCCTGGAGCGGCTCTTTCCAGCGCTGCAGTTGAAACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488558.2
CDS-3UTR CCA 90 bp ATGGGTAGTTGTTGCAAAGTTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCGCAGGGCGGACACCATaGCCTTGGCACCTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: MGSCCKVPVPDHTRPLCAAGRTP*PWHLRE
Trigger: CTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGC...GGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAACTTTGCAACAACTACCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CCA 90 bp AAACAGGGACTGCCAGACTCAATCTTAGAATGGAAACACAAACACACTAGCCCCGAGCGCGCGGCGGCGTaGTTGGCCCTCGGCGTGTTC +
Preference number: 4 (lower is better)
Translates to: KQGLPDSILEWKHKHTSPERAAA*LALGVF
Trigger: GAACACGCCGAGGGCCAACCACGCCGCCGCGCGCTC...GGGGCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTCTGGCAGTCCCTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375441.7
CDS-3UTR TCA 90 bp AGGGTGCGTCATCCATTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCGCCCCTCACCCGGCTaGACAGCTGGTACATCTGTG +
Preference number: 4 (lower is better)
Translates to: RVRHPFASFEPWLFLMFTRPSPG*TAGTSV
Trigger: CACAGATGTACCAGCTGTTCAGCCGGGTGAGGGGCG...GGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp CGCAGCAGGGCGGACACCATGGCCTTGGCACCTCAGGGAGCTCACTTAGAAACCCTTTTCAGCATCGACTaGGGCACTTTTCCCAACAAG +
Preference number: 4 (lower is better)
Translates to: RSRADTMALAPQGAHLETLFSID*GTFPNK
Trigger: CTTGTTGGGAAAAGTGCCTCAGTCGATGCTGAAAAG...GGTTTCTAAGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp CGCAGCAGGGCGGACACCATGGCCTTGGCACCTCAGGGAGCTCACTTAGAAACCGAATCTTTATACACCTaGAGGTCAGACAGCATGCCC +
Preference number: 4 (lower is better)
Translates to: RSRADTMALAPQGAHLETESLYT*RSDSMP
Trigger: GGGCATGCTGTCTGACCTGCAGGTGTATAAAGATTC...GGTTTCTAAGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp CGCAGCAGGGCGGACACCATGGCCTTGGCACCTCAGGGAGCTCACTTAGAAACCCTTTGCGATCAGTTCTaGAGGCTTGTTGGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: RSRADTMALAPQGAHLETLCDQF*RLVGSL
Trigger: AAGAGACCCAACAAGCCTGCAGAACTGATCGCAAAG...GGTTTCTAAGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp CATCTGCAGGTTGAAGTCTTGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCCCCAGGAGGCGGAGGGTaGAGTGAGCTGAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: HLQVEVLSLVKDDPGATSPGGGG*SELRLH
Trigger: GTGCAATCTCAGCTCACTGCACCCTCCGCCTCCTGG...GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR GCA 90 bp TTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCATGAAGGGCCCTTGCCGTGTGTCCCCTCCTaGCTTGGACCCTCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: FASFEPWLFLMFTHEGPLPCVPS*LGPSGL
Trigger: AAGGCCTGAGGGTCCAAGGCAGGAGGGGACACACGG...CAAGGGCCCTTCATGGGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375441.7
CDS-3UTR GCA 90 bp TGGCTAGACACCTGGTGTTTCAAGGCTAAGACCCACCTGGACTCCTACGTTCACCCTGTCCGAGCTTCCTaGTCCACTCCTTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: WLDTWCFKAKTHLDSYVHPVRAS*STPCCW
Trigger: CCAGCAGCAAGGAGTGGAGCAGGAAGCTCGGACAGG...GTGAACGTAGGAGTCCAGGTGGGTCTTAGCCTTGAAACACCAGGTGTCTAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488558.2
CDS-3UTR CCA 90 bp CATCTGCAGGTTGAAGTCTTGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCCCGGACACCATGGCCTTaGCACCTCAGGGAGCTCACT +
Preference number: 4 (lower is better)
Translates to: HLQVEVLSLVKDDPGATSRTPWP*HLRELT
Trigger: AGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCG...GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp CAGCATCTAGGGTCTTCTTCATTGTGCACTCATGATCACACACGAGAACAAACCGCCGAGGGCCCGCTGTaGGCGGTGCTGTGTCGGATG +
Preference number: 4 (lower is better)
Translates to: QHLGSSSLCTHDHTREQTAEGPL*AVLCRM
Trigger: CATCCGACACAGCACCGCCCACAGCGGGCCCTCGGC...GGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAGACCCTAGATGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375441.7
CDS-3UTR CCA 90 bp AATCAGAGTCCCAGAAATGGCACAGGTGTGCTTCCTGCTCTGAGGGTACATTCTTCTGTCTGCAGCAGGTaGGTCCTAGCCGGGGAGCGC +
Preference number: 4 (lower is better)
Translates to: NQSPRNGTGVLPALRVHSSVCSR*VLAGER
Trigger: GCGCTCCCCGGCTAGGACCCACCTGCTGCAGACAGA...AGAATGTACCCTCAGAGCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375441.7
CDS-3UTR TCA 90 bp CATCTGCAGGTTGAAGTCTTGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCCCCTCGAGGTTGTACCTaGTGGAGGTGCTGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: HLQVEVLSLVKDDPGATSPRGCT*WRCCSA
Trigger: TGCAGAGCAGCACCTCCATCAGGTACAACCTCGAGG...GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
CDS-3UTR TCA 90 bp GGTGTATACAGTCCCCGAAAGATGACGGACGATGAGTGCTATGTGCTCAGGAGGCCTCGAGGTTGTACCTaGTGGAGGTGCTGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: GVYSPRKMTDDECYVLRRPRGCT*WRCCSA
Trigger: TGCAGAGCAGCACCTCCATCAGGTACAACCTCGAGG...CCTCCTGAGCACATAGCACTCATCGTCCGTCATCTTTCGGGGACTGTATACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488558.2
CDS-3UTR TCA 90 bp CGCAGCAGGGCGGACACCATGGCCTTGGCACCTCAGGGAGCTCACTTAGAAACCAAAGTAGTTTGCCACTaGAGTTTTCGACCACTGTGC +
Preference number: 4 (lower is better)
Translates to: RSRADTMALAPQGAHLETKVVCH*SFRPLC
Trigger: GCACAGTGGTCGAAAACTTCAGTGGCAAACTACTTT...GGTTTCTAAGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGCTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp CGCAGCAGGGCGGACACCATGGCCTTGGCACCTCAGGGAGCTCACTTAGAAACCTCTAATGTTCACCCATaGAGGGCCCTTGTTTTCACT +
Preference number: 4 (lower is better)
Translates to: RSRADTMALAPQGAHLETSNVHP*RALVFT
Trigger: AGTGAAAACAAGGGCCCTTCATGGGTGAACATTAGA...GGTTTCTAAGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGCTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp TCTTCATTGTGCACTCATGATCACACACGAGAACAAACCAAACTTGCAGCTTTTGGGCCGCGGGCTTGGTaGGGCCGTTGGTGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: SSLCTHDHTREQTKLAAFGPRAW*GRWCGP
Trigger: TGGGCCGCACCAACGGCCTCACCAAGCCCGCGGCCC...AAAAGCTGCAAGTTTGGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375440.9
CDS-3UTR TCA 90 bp ATGGGTAGTTGTTGCAAAGTTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCAGGCGGAGGGTGCAGTaGGCTGAGATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: MGSCCKVPVPDHTRPLCARRRVQ*AEIAPL
Trigger: CAGTGGTGCAATCTCAGCTCACTGCACCCTCCGCCT...GGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAACTTTGCAACAACTACCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR TCA 90 bp AATCAGAGTCCCAGAAATGGCACAGGTGTGCTTCCTGCTCTGAGGGTACATTCTGGTGGGAGAACTGCTTaGACCCAGGAGGCGGAGGGT +
Preference number: 4 (lower is better)
Translates to: NQSPRNGTGVLPALRVHSGGRTA*TQEAEG
Trigger: ACCCTCCGCCTCCTGGGTTCAAGCAGTTCTCCCACC...AGAATGTACCCTCAGAGCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR GCA 90 bp GGACACAGCTTTTGTCCAAAGTCGGCTTGCAGGAGGCGGCAGGATTCAGCGCCATCTGCAGCACATAGGTaGGGTCCAAGAACAGGAAGA +
Preference number: 4 (lower is better)
Translates to: GHSFCPKSACRRRQDSAPSAAHR*GPRTGR
Trigger: TCTTCCTGTTCTTGGACCGCACCTATGTGCTGCAGA...TGGCGCTGAATCCTGCCGCCTCCTGCAAGCCGACTTTGGACAAAAGCTGTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488558.2
CDS-3UTR GCA 90 bp TTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCATGAAGGGCCCTTGATGTACTCGCTCCAGTaGTGCAGCAGCGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FASFEPWLFLMFTHEGPLMYSLQ*CSSACC
Trigger: GCAGCAGGCGCTGCTGCAGCACTGGAGCGAGTACAT...CAAGGGCCCTTCATGGGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp CATCTGCAGGTTGAAGTCTTGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCCTCAGCACACGTGCTTTaGCACAGGCCAGGGACTGCA +
Preference number: 4 (lower is better)
Translates to: HLQVEVLSLVKDDPGATSSAHVL*HRPGTA
Trigger: TGCAGTCCCTGGCCTGTGGCAAAGCACGTGTGCTGA...GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp CCTGGTGTATACAGTCCCCGAAAGATGACGGACGATGAGTGCTATGTGCTCAGGTCCTGCTCCACTCCTTaGTGCTGGCTAGACACCTGG +
Preference number: 4 (lower is better)
Translates to: PGVYSPRKMTDDECYVLRSCSTP*CWLDTW
Trigger: CCAGGTGTCTAGCCAGCAGCAAGGAGTGGAGCAGGA...CCTGAGCACATAGCACTCATCGTCCGTCATCTTTCGGGGACTGTATACACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488558.2
CDS-3UTR GCA 90 bp GTATACAGTCCCCGAAAGATGACGGACGATGAGTGCTATGTGCTCAGGAGGCCGATGACGGACGATGAGTaGTATGTGCTCAGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: VYSPRKMTDDECYVLRRPMTDDE*YVLRRP
Trigger: CGGCCTCCTGAGCACATAGCACTCATCGTCCGTCAT...CGGCCTCCTGAGCACATAGCACTCATCGTCCGTCATCTTTCGGGGACTGTATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488558.2
CDS-3UTR CCA 90 bp CATCTGCAGGTTGAAGTCTTGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCCGGAAGGATCTGTGCCTaGACGTGGTCTTCACAGGCC +
Preference number: 4 (lower is better)
Translates to: HLQVEVLSLVKDDPGATSGRICA*TWSSQA
Trigger: GGCCTGTGAAGACCACGTCCAGGCACAGATCCTTCC...GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp CGCAGCAGGGCGGACACCATGGCCTTGGCACCTCAGGGAGCTCACTTAGAAACCTCCTGCATTAACCTTTaGCCTTCGGCAGCATATAAG +
Preference number: 4 (lower is better)
Translates to: RSRADTMALAPQGAHLETSCINL*PSAAYK
Trigger: CTTATATGCTGCCGAAGGCCAAAGGTTAATGCAGGA...GGTTTCTAAGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGCTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp CATCTGCAGGTTGAAGTCTTGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCCACCCGGCTGAACAGCTaGTACATCTGTGCGAGGTCC +
Preference number: 4 (lower is better)
Translates to: HLQVEVLSLVKDDPGATSTRLNS*YICARS
Trigger: GGACCTCGCACAGATGTACCAGCTGTTCAGCCGGGT...GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp TTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCATGAAGGGCCCTTGCGGACACCATGGCCTTaGCACCTCAGGGAGCTCACT +
Preference number: 4 (lower is better)
Translates to: FASFEPWLFLMFTHEGPLRTPWP*HLRELT
Trigger: AGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCG...CAAGGGCCCTTCATGGGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp CATCTGCAGGTTGAAGTCTTGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCCTTGCCCTCCCATAGCTaGGACTACAGGCGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: HLQVEVLSLVKDDPGATSLPSHS*DYRREP
Trigger: TGGCTCACGCCTGTAGTCCCAGCTATGGGAGGGCAA...GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CCA 90 bp AAACAGGGACTGCCAGACTCAATCTTAGAATGGAAACACAAACACACTAGCCCCACTTGCTGGCACGTGTaGCCGCGCTCCCAGGCGGTC +
Preference number: 4 (lower is better)
Translates to: KQGLPDSILEWKHKHTSPTCWHV*PRSQAV
Trigger: GACCGCCTGGGAGCGCGGCCACACGTGCCAGCAAGT...GGGGCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTCTGGCAGTCCCTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375441.7
CDS-3UTR CCA 90 bp GGACACAGCTTTTGTCCAAAGTCGGCTTGCAGGAGGCGGCAGGATTCAGCGCCAAGGCTAAGACCCACCTaGACTCCTACGTTCACGTTA +
Preference number: 4 (lower is better)
Translates to: GHSFCPKSACRRRQDSAPRLRPT*TPTFTL
Trigger: TAACGTGAACGTAGGAGTCCAGGTGGGTCTTAGCCT...TGGCGCTGAATCCTGCCGCCTCCTGCAAGCCGACTTTGGACAAAAGCTGTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488558.2
CDS-3UTR TCA 90 bp AGGGTGCGTCATCCATTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCCTCGAGGTTGTACCTaGTGGAGGTGCTGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: RVRHPFASFEPWLFLMFTPRGCT*WRCCSA
Trigger: TGCAGAGCAGCACCTCCATCAGGTACAACCTCGAGG...GGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
CDS-3UTR TCA 90 bp CGCAGCAGGGCGGACACCATGGCCTTGGCACCTCAGGGAGCTCACTTAGAAACCTGTCTTTCTCAGGATTaGTTACGATCGCTGTTCCAA +
Preference number: 4 (lower is better)
Translates to: RSRADTMALAPQGAHLETCLSQD*LRSLFQ
Trigger: TTGGAACAGCGATCGTAATCAATCCTGAGAAAGACA...GGTTTCTAAGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGCTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp TTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCATGAAGGGCCCTTGCTTCCAGCTTGCTGGTaGAGGCTGCACCGCACTCAT +
Preference number: 4 (lower is better)
Translates to: FASFEPWLFLMFTHEGPLLPACW*RLHRTH
Trigger: ATGAGTGCGGTGCAGCCTTCACCAGCAAGCTGGAAG...CAAGGGCCCTTCATGGGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp CGCAGCAGGGCGGACACCATGGCCTTGGCACCTCAGGGAGCTCACTTAGAAACCGCTCACTTAGAAACCTaGCTTACGAAAAATCAGCCA +
Preference number: 4 (lower is better)
Translates to: RSRADTMALAPQGAHLETAHLET*LTKNQP
Trigger: TGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGC...GGTTTCTAAGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGCTGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp ATGGGTAGTTGTTGCAAAGTTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCCACAAGGAACTCAGCTaGCGAACAGACGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: MGSCCKVPVPDHTRPLCAHKELS*RTDAAG
Trigger: CCCTGCTGCGTCTGTTCGTCAGCTGAGTTCCTTGTG...GGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAACTTTGCAACAACTACCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR TCA 90 bp AGGGTGCGTCATCCATTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCACAAGGAACTCAGCTaGCGAACAGACGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: RVRHPFASFEPWLFLMFTHKELS*RTDAAG
Trigger: CCCTGCTGCGTCTGTTCGTCAGCTGAGTTCCTTGTG...GGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp TTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCACGCCGAGTTCCTGTGTATAGGTGCTCCCTGCTCTaGCTTCTGTCTAGTGCACTA +
Preference number: 4 (lower is better)
Translates to: FQFLITHGPFVPRRVPVYRCSLL*LLSSAL
Trigger: TAGTGCACTAGACAGAAGTCAGAGCAGGGAGCACCT...ATACACAGGAACTCGGCGTGGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR GCA 90 bp CATCTGCAGGTTGAAGTCTTGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCCCAGCTGGTACATCTGTaGGAGGTCCGGCACTCTGTT +
Preference number: 4 (lower is better)
Translates to: HLQVEVLSLVKDDPGATSQLVHL*EVRHSV
Trigger: AACAGAGTGCCGGACCTCGCACAGATGTACCAGCTG...GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp GGGAGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTGCAGCAGCGCCTGCTaGCCGCCCCTCACCCGGCTG +
Preference number: 4 (lower is better)
Translates to: GSSLRNLTYEKSAIKVYNCSSAC*PPLTRL
Trigger: CAGCCGGGTGAGGGGCGGGCAGCAGGCGCTGCTGCA...GTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp TCTTCATTGTGCACTCATGATCACACACGAGAACAAACCAAACTTGCAGCTTTTTGCAGCAGCGCCTGCTaGCCGCCCCTCACCCGGCTG +
Preference number: 4 (lower is better)
Translates to: SSLCTHDHTREQTKLAAFCSSAC*PPLTRL
Trigger: CAGCCGGGTGAGGGGCGGGCAGCAGGCGCTGCTGCA...AAAAGCTGCAAGTTTGGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp CAGCATCTAGGGTCTTCTTCATTGTGCACTCATGATCACACACGAGAACAAACCTACTCGCTCCAGTGCTaGAGCAGCGCCTGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: QHLGSSSLCTHDHTREQTYSLQC*SSACCP
Trigger: CGGGCAGCAGGCGCTGCTGCAGCACTGGAGCGAGTA...GGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAGACCCTAGATGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp CATCTGCAGGTTGAAGTCTTGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCCCTTGCTGGTGAAGGCTaGACCGCACTCATGCTTGAG +
Preference number: 4 (lower is better)
Translates to: HLQVEVLSLVKDDPGATSLAGEG*TALMLE
Trigger: CTCAAGCATGAGTGCGGTGCAGCCTTCACCAGCAAG...GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp ATGGGTAGTTGTTGCAAAGTTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCCCACAGGCCAGGGACTaGAGCGTTCTGCGCAATTCA +
Preference number: 4 (lower is better)
Translates to: MGSCCKVPVPDHTRPLCAPQARD*SVLRNS
Trigger: TGAATTGCGCAGAACGCTGCAGTCCCTGGCCTGTGG...GGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAACTTTGCAACAACTACCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR GCA 90 bp AGGGTGCGTCATCCATTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCCACAGGCCAGGGACTaGAGCGTTCTGCGCAATTCA +
Preference number: 4 (lower is better)
Translates to: RVRHPFASFEPWLFLMFTPQARD*SVLRNS
Trigger: TGAATTGCGCAGAACGCTGCAGTCCCTGGCCTGTGG...GGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp AATCAGAGTCCCAGAAATGGCACAGGTGTGCTTCCTGCTCTGAGGGTACATTCTGGCCAGTGGCTAGGGTaGGTCATCCATTCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: NQSPRNGTGVLPALRVHSGQWLG*VIHSPA
Trigger: AGCTGGCGAATGGATGACGCACCCTAGCCACTGGCC...AGAATGTACCCTCAGAGCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp TTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCATGAAGGGCCCTTGACGATCCTCCCACCTTaGCCTCCCATAGCTGGGACT +
Preference number: 4 (lower is better)
Translates to: FASFEPWLFLMFTHEGPLTILPP*PPIAGT
Trigger: AGTCCCAGCTATGGGAGGGCAAGGTGGGAGGATCGT...CAAGGGCCCTTCATGGGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR GCA 90 bp AAACAGGGACTGCCAGACTCAATCTTAGAATGGAAACACAAACACACTAGCCCCGCGGTCCCAGGTCGCTaGCCTCACTTGCTGGCACGT +
Preference number: 4 (lower is better)
Translates to: KQGLPDSILEWKHKHTSPAVPGR*PHLLAR
Trigger: ACGTGCCAGCAAGTGAGGGCAGCGACCTGGGACCGC...GGGGCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTCTGGCAGTCCCTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375441.7
CDS-3UTR CCA 90 bp CCGTGGCCGCGAACGCTGCTGAGGAAAGGCCCCAGAACCCCTGGTGTATACAGTTTGCTTGTAGAGCATTaGGGAGACTTTGTGAGAACA +
Preference number: 4 (lower is better)
Translates to: PWPRTLLRKGPRTPGVYSLLVEH*GDFVRT
Trigger: TGTTCTCACAAAGTCTCCCCAATGCTCTACAAGCAA...ACTGTATACACCAGGGGTTCTGGGGCCTTTCCTCAGCAGCGTTCGCGGCCACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488558.2
CDS-3UTR CCA 90 bp AGGGTGCGTCATCCATTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCGGAAGGATCTGTGCCTaGACGTGGTCTTCACAGGCC +
Preference number: 4 (lower is better)
Translates to: RVRHPFASFEPWLFLMFTGRICA*TWSSQA
Trigger: GGCCTGTGAAGACCACGTCCAGGCACAGATCCTTCC...GGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp TTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCACGCCGAGTTCCTGTGTATCATGGGCGTGTATGTTaGCCAGTAGCCCATTGTGAG +
Preference number: 4 (lower is better)
Translates to: FQFLITHGPFVPRRVPVYHGRVC*PVAHCE
Trigger: CTCACAATGGGCTACTGGCCAACATACACGCCCATG...ATACACAGGAACTCGGCGTGGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CCA 90 bp CAGCATCTAGGGTCTTCTTCATTGTGCACTCATGATCACACACGAGAACAAACCGCAGGGCGGACACCATaGCCTTGGCACCTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: QHLGSSSLCTHDHTREQTAGRTP*PWHLRE
Trigger: CTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGC...GGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAGACCCTAGATGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp GGGAGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACGCCGGGCGGTGTCCGTaGATCGCGGAGTCGTCGCGG +
Preference number: 4 (lower is better)
Translates to: GSSLRNLTYEKSAIKVYNAGRCP*IAESSR
Trigger: CCGCGACGACTCCGCGATCCACGGACACCGCCCGGC...GTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375441.7
CDS-3UTR CCA 90 bp TCTTCATTGTGCACTCATGATCACACACGAGAACAAACCAAACTTGCAGCTTTTGCGCGGCGGCGTGGTTaGCCCTCGGCGTGTTCCGTG +
Preference number: 4 (lower is better)
Translates to: SSLCTHDHTREQTKLAAFARRRG*PSACSV
Trigger: CACGGAACACGCCGAGGGCCAACCACGCCGCCGCGC...AAAAGCTGCAAGTTTGGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375441.7
CDS-3UTR TCA 90 bp CAGCATCTAGGGTCTTCTTCATTGTGCACTCATGATCACACACGAGAACAAACCCGCCCCTCACCCGGCTaGACAGCTGGTACATCTGTG +
Preference number: 4 (lower is better)
Translates to: QHLGSSSLCTHDHTREQTRPSPG*TAGTSV
Trigger: CACAGATGTACCAGCTGTTCAGCCGGGTGAGGGGCG...GGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAGACCCTAGATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp AATCAGAGTCCCAGAAATGGCACAGGTGTGCTTCCTGCTCTGAGGGTACATTCTGAGCCTTGTGAAAGATaGCCCAGGAGCCACCTCCCT +
Preference number: 4 (lower is better)
Translates to: NQSPRNGTGVLPALRVHSEPCER*PRSHLP
Trigger: AGGGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTC...AGAATGTACCCTCAGAGCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp AATCAGAGTCCCAGAAATGGCACAGGTGTGCTTCCTGCTCTGAGGGTACATTCTCACAAGGAACTCAGCTaGCGAACAGACGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: NQSPRNGTGVLPALRVHSHKELS*RTDAAG
Trigger: CCCTGCTGCGTCTGTTCGTCAGCTGAGTTCCTTGTG...AGAATGTACCCTCAGAGCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp AGGGTGCGTCATCCATTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCGAAGAGAGGATCGCTTaGGCCCAGAAGGTAGAGGCT +
Preference number: 4 (lower is better)
Translates to: RVRHPFASFEPWLFLMFTEERIA*AQKVEA
Trigger: AGCCTCTACCTTCTGGGCTCAAGCGATCCTCTCTTC...GGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR TCA 90 bp ATGGGTAGTTGTTGCAAAGTTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCGAAGAGAGGATCGCTTaGGCCCAGAAGGTAGAGGCT +
Preference number: 4 (lower is better)
Translates to: MGSCCKVPVPDHTRPLCAEERIA*AQKVEA
Trigger: AGCCTCTACCTTCTGGGCTCAAGCGATCCTCTCTTC...GGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAACTTTGCAACAACTACCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR TCA 90 bp GTATACAGTCCCCGAAAGATGACGGACGATGAGTGCTATGTGCTCAGGAGGCCGAGACAAATCAGACGGTaGGACCGGACACAGCTTTTG +
Preference number: 4 (lower is better)
Translates to: VYSPRKMTDDECYVLRRPRQIRR*DRTQLL
Trigger: CAAAAGCTGTGTCCGGTCTCACCGTCTGATTTGTCT...CGGCCTCCTGAGCACATAGCACTCATCGTCCGTCATCTTTCGGGGACTGTATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488558.2
CDS-3UTR GCA 90 bp TCTTCATTGTGCACTCATGATCACACACGAGAACAAACCAAACTTGCAGCTTTTGCCCGCACCGCCTCGTaGAGCTTCCGCCACGTGTCC +
Preference number: 4 (lower is better)
Translates to: SSLCTHDHTREQTKLAAFARTAS*SFRHVS
Trigger: GGACACGTGGCGGAAGCTGCACGAGGCGGTGCGGGC...AAAAGCTGCAAGTTTGGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp GGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTATTGCAATCGCCCGCACCGCCTCGTaGAGCTTCCGCCACGTGTCC +
Preference number: 4 (lower is better)
Translates to: GSSLRMTVKTKPNFIIAIARTAS*SFRHVS
Trigger: GGACACGTGGCGGAAGCTGCACGAGGCGGTGCGGGC...GATTGCAATAATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp AATCAGAGTCCCAGAAATGGCACAGGTGTGCTTCCTGCTCTGAGGGTACATTCTTCAGCACACGTGCTTTaGCACAGGCCAGGGACTGCA +
Preference number: 4 (lower is better)
Translates to: NQSPRNGTGVLPALRVHSSAHVL*HRPGTA
Trigger: TGCAGTCCCTGGCCTGTGGCAAAGCACGTGTGCTGA...AGAATGTACCCTCAGAGCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp TTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCATGAAGGGCCCTTGAGATGGAGGGCAGCGTaGAGTTCTGCAGCACATAGG +
Preference number: 4 (lower is better)
Translates to: FASFEPWLFLMFTHEGPLRWRAA*SSAAHR
Trigger: CCTATGTGCTGCAGAACTCCACGCTGCCCTCCATCT...CAAGGGCCCTTCATGGGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp CATCTGCAGGTTGAAGTCTTGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCCCAGACCTCGATCACGTaGTCCACCTTGTCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: HLQVEVLSLVKDDPGATSQTSIT*STLSLK
Trigger: CTTCAAGGACAAGGTGGACCACGTGATCGAGGTCTG...GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp CATCTGCAGGTTGAAGTCTTGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCCATCCCATATCCCAGATaGAGGGCAGCGTGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: HLQVEVLSLVKDDPGATSIPYPR*RAAWSS
Trigger: AGAACTCCACGCTGCCCTCCATCTGGGATATGGGAT...GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp TTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCACGCCGAGTTCCTGTGTATCTGTTCCAAAAGTCTTaGTGTACTCGCTCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: FQFLITHGPFVPRRVPVYLFQKS*CTRSSA
Trigger: AGCACTGGAGCGAGTACATCAAGACTTTTGGAACAG...ATACACAGGAACTCGGCGTGGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR TCA 90 bp ATGGGTAGTTGTTGCAAAGTTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCGGTCCACCTTGTCCTTaGAGTCCAACAGGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: MGSCCKVPVPDHTRPLCAGPPCP*SPTGLG
Trigger: TCCAAGACCTGTTGGACTTCAAGGACAAGGTGGACC...GGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAACTTTGCAACAACTACCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR TCA 90 bp TTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCATGAAGGGCCCTTGGGTCCACCTTGTCCTTaGAGTCCAACAGGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: FASFEPWLFLMFTHEGPLGPPCP*SPTGLG
Trigger: TCCAAGACCTGTTGGACTTCAAGGACAAGGTGGACC...CAAGGGCCCTTCATGGGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp CATCTGCAGGTTGAAGTCTTGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCCAAAGCTCCATGTCCTTaGACATGCCTTCCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: HLQVEVLSLVKDDPGATSKAPCP*TCLPAC
Trigger: GCAAGCTGGAAGGCATGTTCAAGGACATGGAGCTTT...GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp CATCTGCAGGTTGAAGTCTTGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCCGAGGTCTATAGGGCCTaGGTCACTCTGATTCTGCAT +
Preference number: 4 (lower is better)
Translates to: HLQVEVLSLVKDDPGATSEVYRA*VTLILH
Trigger: ATGCAGAATCAGAGTGACTCAGGCCCTATAGACCTC...GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp TTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCACGCCGAGTTCCTGTGTATTCCATTCGCCAGCTTTaGACCCTGGCTCTTTCTAAT +
Preference number: 4 (lower is better)
Translates to: FQFLITHGPFVPRRVPVYSIRQL*TLALSN
Trigger: ATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGA...ATACACAGGAACTCGGCGTGGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR GCA 90 bp CATCTGCAGGTTGAAGTCTTGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCCAAACGGAAGGATCTGTaGCTGGACGTGGTCTTCACA +
Preference number: 4 (lower is better)
Translates to: HLQVEVLSLVKDDPGATSKRKDL*LDVVFT
Trigger: TGTGAAGACCACGTCCAGGCACAGATCCTTCCGTTT...GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp CATCTGCAGGTTGAAGTCTTGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCCTCTGCAGCACATAGGTaGGGTCCAAGAACAGGAAGA +
Preference number: 4 (lower is better)
Translates to: HLQVEVLSLVKDDPGATSSAAHR*GPRTGR
Trigger: TCTTCCTGTTCTTGGACCGCACCTATGTGCTGCAGA...GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp CAGCATCTAGGGTCTTCTTCATTGTGCACTCATGATCACACACGAGAACAAACCGCAGGTCAGACAGCATaGCCAGGAGGCTCCGCAACA +
Preference number: 4 (lower is better)
Translates to: QHLGSSSLCTHDHTREQTAGQTA*PGGSAT
Trigger: TGTTGCGGAGCCTCCTGGGCATGCTGTCTGACCTGC...GGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAGACCCTAGATGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp CAGCATCTAGGGTCTTCTTCATTGTGCACTCATGATCACACACGAGAACAAACCATGTACTCGCTCCAGTaGTGCAGCAGCGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QHLGSSSLCTHDHTREQTMYSLQ*CSSACC
Trigger: GCAGCAGGCGCTGCTGCAGCACTGGAGCGAGTACAT...GGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAGACCCTAGATGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp AAACAGGGACTGCCAGACTCAATCTTAGAATGGAAACACAAACACACTAGCCCCCCAGGAGGCGGAGGGTaGAGTGAGCTGAGATTGCAC +
Preference number: 4 (lower is better)
Translates to: KQGLPDSILEWKHKHTSPPGGGG*SELRLH
Trigger: GTGCAATCTCAGCTCACTGCACCCTCCGCCTCCTGG...GGGGCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTCTGGCAGTCCCTGTTT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CCA 90 bp AATCAGAGTCCCAGAAATGGCACAGGTGTGCTTCCTGCTCTGAGGGTACATTCTAGATGGAGGGCAGCGTaGAGTTCTGCAGCACATAGG +
Preference number: 4 (lower is better)
Translates to: NQSPRNGTGVLPALRVHSRWRAA*SSAAHR
Trigger: CCTATGTGCTGCAGAACTCCACGCTGCCCTCCATCT...AGAATGTACCCTCAGAGCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp AGGGTGCGTCATCCATTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCAGACCTCGATCACGTaGTCCACCTTGTCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: RVRHPFASFEPWLFLMFTQTSIT*STLSLK
Trigger: CTTCAAGGACAAGGTGGACCACGTGATCGAGGTCTG...GGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp ATGGGTAGTTGTTGCAAAGTTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCCAGACCTCGATCACGTaGTCCACCTTGTCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: MGSCCKVPVPDHTRPLCAQTSIT*STLSLK
Trigger: CTTCAAGGACAAGGTGGACCACGTGATCGAGGTCTG...GGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAACTTTGCAACAACTACCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CCA 90 bp CGCAGCAGGGCGGACACCATGGCCTTGGCACCTCAGGGAGCTCACTTAGAAACCGACTCAATCTTAGAATaGAAACACAAACACACTAGC +
Preference number: 4 (lower is better)
Translates to: RSRADTMALAPQGAHLETDSILE*KHKHTS
Trigger: GCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTC...GGTTTCTAAGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGCTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp CATCTGCAGGTTGAAGTCTTGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCCGTGCTCAGGATGGTCTaGAACTCAGGCTCAAACGAT +
Preference number: 4 (lower is better)
Translates to: HLQVEVLSLVKDDPGATSVLRMV*NSGSND
Trigger: ATCGTTTGAGCCTGAGTTCCAGACCATCCTGAGCAC...GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CCA 90 bp CATCTGCAGGTTGAAGTCTTGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCCAACAGGATCTCCCTATaGTGCTCAGGATGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: HLQVEVLSLVKDDPGATSNRISL*CSGWSG
Trigger: TCCAGACCATCCTGAGCACCATAGGGAGATCCTGTT...GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CCA 90 bp AGGGTGCGTCATCCATTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCTTGGGAGACTGAGGTaGGAGAACTGCTTGAACCCA +
Preference number: 4 (lower is better)
Translates to: RVRHPFASFEPWLFLMFTLGRLR*ENCLNP
Trigger: TGGGTTCAAGCAGTTCTCCCACCTCAGTCTCCCAAG...GGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CCA 90 bp ACTACATTAACAGAGAACAAGACAAATCAGACGGTGAGACCGGACACAGCTTTTGACATGTGGGGTCCGTaGCCGCGAACGCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: TTLTENKTNQTVRPDTAFDMWGP*PRTLLR
Trigger: CCTCAGCAGCGTTCGCGGCCACGGACCCCACATGTC...AAAAGCTGTGTCCGGTCTCACCGTCTGATTTGTCTTGTTCTCTGTTAATGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488558.2
CDS-3UTR TCA 90 bp TTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCATGAAGGGCCCTTGGAGGTCTATAGGGCCTaGGTCACTCTGATTCTGCAT +
Preference number: 4 (lower is better)
Translates to: FASFEPWLFLMFTHEGPLEVYRA*VTLILH
Trigger: ATGCAGAATCAGAGTGACTCAGGCCCTATAGACCTC...CAAGGGCCCTTCATGGGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp CATCTGCAGGTTGAAGTCTTGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCCGTGTGCTTCCTGCTCTaGGGGTACATTCTAGTGTTT +
Preference number: 4 (lower is better)
Translates to: HLQVEVLSLVKDDPGATSVCFLL*GYILVF
Trigger: AAACACTAGAATGTACCCTCAGAGCAGGAAGCACAC...GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp CATCTGCAGGTTGAAGTCTTGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCCTCCATTCGCCAGCTTTaGACCCTGGCTCTTTCTAAT +
Preference number: 4 (lower is better)
Translates to: HLQVEVLSLVKDDPGATSSIRQL*TLALSN
Trigger: ATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGA...GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp TTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCATGAAGGGCCCTTGTCTGCAGCACATAGGTaGGGTCCAAGAACAGGAAGA +
Preference number: 4 (lower is better)
Translates to: FASFEPWLFLMFTHEGPLSAAHR*GPRTGR
Trigger: TCTTCCTGTTCTTGGACCGCACCTATGTGCTGCAGA...CAAGGGCCCTTCATGGGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp CATCTGCAGGTTGAAGTCTTGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCCGAATCTTTATACACCTaGAGGTCAGACAGCATGCCC +
Preference number: 4 (lower is better)
Translates to: HLQVEVLSLVKDDPGATSESLYT*RSDSMP
Trigger: GGGCATGCTGTCTGACCTGCAGGTGTATAAAGATTC...GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp GGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTATTGCAATCTACTCGCTCCAGTGCTaGAGCAGCGCCTGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: GSSLRMTVKTKPNFIIAIYSLQC*SSACCP
Trigger: CGGGCAGCAGGCGCTGCTGCAGCACTGGAGCGAGTA...GATTGCAATAATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp AGGGTGCGTCATCCATTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCGGGACTGCAGCGTTCTaGGCAATTCACTATCCTCTA +
Preference number: 4 (lower is better)
Translates to: RVRHPFASFEPWLFLMFTGTAAF*AIHYPL
Trigger: TAGAGGATAGTGAATTGCGCAGAACGCTGCAGTCCC...GGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp AAACAGGGACTGCCAGACTCAATCTTAGAATGGAAACACAAACACACTAGCCCCTCAGCACACGTGCTTTaGCACAGGCCAGGGACTGCA +
Preference number: 4 (lower is better)
Translates to: KQGLPDSILEWKHKHTSPSAHVL*HRPGTA
Trigger: TGCAGTCCCTGGCCTGTGGCAAAGCACGTGTGCTGA...GGGGCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTCTGGCAGTCCCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp AAACAGGGACTGCCAGACTCAATCTTAGAATGGAAACACAAACACACTAGCCCCGGAACCGTCTGCAGATaGGTCAGGCCACGTAGTGGT +
Preference number: 4 (lower is better)
Translates to: KQGLPDSILEWKHKHTSPGTVCR*VRPRSG
Trigger: ACCACTACGTGGCCTGACGCATCTGCAGACGGTTCC...GGGGCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTCTGGCAGTCCCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp CGCAGCAGGGCGGACACCATGGCCTTGGCACCTCAGGGAGCTCACTTAGAAACCAAGCGTTTACTTACATaGTTAAGATATTCTGGAACC +
Preference number: 4 (lower is better)
Translates to: RSRADTMALAPQGAHLETKRLLT*LRYSGT
Trigger: GGTTCCAGAATATCTTAACCATGTAAGTAAACGCTT...GGTTTCTAAGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGCTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp CAGCATCTAGGGTCTTCTTCATTGTGCACTCATGATCACACACGAGAACAAACCACCCGGCTGAACAGCTaGTACATCTGTGCGAGGTCC +
Preference number: 4 (lower is better)
Translates to: QHLGSSSLCTHDHTREQTTRLNS*YICARS
Trigger: GGACCTCGCACAGATGTACCAGCTGTTCAGCCGGGT...GGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAGACCCTAGATGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp AAACAGGGACTGCCAGACTCAATCTTAGAATGGAAACACAAACACACTAGCCCCACCCGGCTGAACAGCTaGTACATCTGTGCGAGGTCC +
Preference number: 4 (lower is better)
Translates to: KQGLPDSILEWKHKHTSPTRLNS*YICARS
Trigger: GGACCTCGCACAGATGTACCAGCTGTTCAGCCGGGT...GGGGCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTCTGGCAGTCCCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp AGGGTGCGTCATCCATTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCAACCGCTCATTCTTCTaGAAGCAGACCTCGATCACG +
Preference number: 4 (lower is better)
Translates to: RVRHPFASFEPWLFLMFTNRSFF*KQTSIT
Trigger: CGTGATCGAGGTCTGCTTCCAGAAGAATGAGCGGTT...GGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp AATCAGAGTCCCAGAAATGGCACAGGTGTGCTTCCTGCTCTGAGGGTACATTCTTCAGAGTCCCAGAAATaGCACAGGTGTGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: NQSPRNGTGVLPALRVHSSESQK*HRCASC
Trigger: GCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGA...AGAATGTACCCTCAGAGCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp CAGCATCTAGGGTCTTCTTCATTGTGCACTCATGATCACACACGAGAACAAACCACAGAGAGGGGCCAGTaGCTAGGGTGCGTCATCCAT +
Preference number: 4 (lower is better)
Translates to: QHLGSSSLCTHDHTREQTTERGQ*LGCVIH
Trigger: ATGGATGACGCACCCTAGCCACTGGCCCCTCTCTGT...GGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAGACCCTAGATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp TCTTCATTGTGCACTCATGATCACACACGAGAACAAACCAAACTTGCAGCTTTTGCAGGGCGGACACCATaGCCTTGGCACCTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SSLCTHDHTREQTKLAAFAGRTP*PWHLRE
Trigger: CTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGC...AAAAGCTGCAAGTTTGGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp AGGGTGCGTCATCCATTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCACTACCTGGCCCCACTaGTATTTTGTGGTAGAGGTG +
Preference number: 4 (lower is better)
Translates to: RVRHPFASFEPWLFLMFTTTWPH*YFVVEV
Trigger: CACCTCTACCACAAAATACCAGTGGGGCCAGGTAGT...GGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CCA 90 bp CAGCATCTAGGGTCTTCTTCATTGTGCACTCATGATCACACACGAGAACAAACCGCCCAGCTACTCAGGTaGCTGAGAAGAGAGGATCGC +
Preference number: 4 (lower is better)
Translates to: QHLGSSSLCTHDHTREQTAQLLR*LRREDR
Trigger: GCGATCCTCTCTTCTCAGCCACCTGAGTAGCTGGGC...GGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAGACCCTAGATGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CCA 90 bp ATTAACAGAGAACAAGACAAATCAGACGGTGAGACCGGACACAGCTTTTGTCCATTCAGCGCCATGGGGTaGCCACAGAGGACACACAGG +
Preference number: 4 (lower is better)
Translates to: INREQDKSDGETGHSFCPFSAMG*PQRTHR
Trigger: CCTGTGTGTCCTCTGTGGCCACCCCATGGCGCTGAA...TGGACAAAAGCTGTGTCCGGTCTCACCGTCTGATTTGTCTTGTTCTCTGTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488558.2
CDS-3UTR TCA 90 bp GGGAGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACCGCCCCTCACCCGGCTaGACAGCTGGTACATCTGTG +
Preference number: 4 (lower is better)
Translates to: GSSLRNLTYEKSAIKVYNRPSPG*TAGTSV
Trigger: CACAGATGTACCAGCTGTTCAGCCGGGTGAGGGGCG...GTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp TTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCATGAAGGGCCCTTGCTGTTCCAAAAGTCTTaGTGTACTCGCTCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: FASFEPWLFLMFTHEGPLLFQKS*CTRSSA
Trigger: AGCACTGGAGCGAGTACATCAAGACTTTTGGAACAG...CAAGGGCCCTTCATGGGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp AGGGTGCGTCATCCATTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCACTCCTTCATCAGGTTaGCGAACCGCTCATTCTTCT +
Preference number: 4 (lower is better)
Translates to: RVRHPFASFEPWLFLMFTTPSSG*RTAHSS
Trigger: AGAAGAATGAGCGGTTCGTCAACCTGATGAAGGAGT...GGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp AGGGTGCGTCATCCATTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCATTCTAGTGTTTCATaGAGGGGAACCGTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RVRHPFASFEPWLFLMFTHSSVS*RGTVCR
Trigger: TCTGCAGACGGTTCCCCTTCATGAAACACTAGAATG...GGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp TTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCATGAAGGGCCCTTGGTGTGCTTCCTGCTCTaGGGGTACATTCTAGTGTTT +
Preference number: 4 (lower is better)
Translates to: FASFEPWLFLMFTHEGPLVCFLL*GYILVF
Trigger: AAACACTAGAATGTACCCTCAGAGCAGGAAGCACAC...CAAGGGCCCTTCATGGGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp AGGGTGCGTCATCCATTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCGTGTGCTTCCTGCTCTaGGGGTACATTCTAGTGTTT +
Preference number: 4 (lower is better)
Translates to: RVRHPFASFEPWLFLMFTVCFLL*GYILVF
Trigger: AAACACTAGAATGTACCCTCAGAGCAGGAAGCACAC...GGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp GGGAGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACGGTGGGAGAACTGCTTaGACCCAGGAGGCGGAGGGT +
Preference number: 4 (lower is better)
Translates to: GSSLRNLTYEKSAIKVYNGGRTA*TQEAEG
Trigger: ACCCTCCGCCTCCTGGGTTCAAGCAGTTCTCCCACC...GTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR GCA 90 bp AATCAGAGTCCCAGAAATGGCACAGGTGTGCTTCCTGCTCTGAGGGTACATTCTAAACGGAAGGATCTGTaGCTGGACGTGGTCTTCACA +
Preference number: 4 (lower is better)
Translates to: NQSPRNGTGVLPALRVHSKRKDL*LDVVFT
Trigger: TGTGAAGACCACGTCCAGGCACAGATCCTTCCGTTT...AGAATGTACCCTCAGAGCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp CAGAGAACAAGGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATGCAGGTCAGACAGCATaGCCAGGAGGCTCCGCAACA +
Preference number: 4 (lower is better)
Translates to: QRTRIVPAHDCKNQTKLYAGQTA*PGGSAT
Trigger: TGTTGCGGAGCCTCCTGGGCATGCTGTCTGACCTGC...ATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCCTTGTTCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp TTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCATGAAGGGCCCTTGGAATCTTTATACACCTaGAGGTCAGACAGCATGCCC +
Preference number: 4 (lower is better)
Translates to: FASFEPWLFLMFTHEGPLESLYT*RSDSMP
Trigger: GGGCATGCTGTCTGACCTGCAGGTGTATAAAGATTC...CAAGGGCCCTTCATGGGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp AGGGTGCGTCATCCATTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCGAATCTTTATACACCTaGAGGTCAGACAGCATGCCC +
Preference number: 4 (lower is better)
Translates to: RVRHPFASFEPWLFLMFTESLYT*RSDSMP
Trigger: GGGCATGCTGTCTGACCTGCAGGTGTATAAAGATTC...GGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp CAGCATCTAGGGTCTTCTTCATTGTGCACTCATGATCACACACGAGAACAAACCCAGCTGGTACATCTGTaGGAGGTCCGGCACTCTGTT +
Preference number: 4 (lower is better)
Translates to: QHLGSSSLCTHDHTREQTQLVHL*EVRHSV
Trigger: AACAGAGTGCCGGACCTCGCACAGATGTACCAGCTG...GGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAGACCCTAGATGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp TTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCATGAAGGGCCCTTGCTTTGCGATCAGTTCTaGAGGCTTGTTGGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: FASFEPWLFLMFTHEGPLLCDQF*RLVGSL
Trigger: AAGAGACCCAACAAGCCTGCAGAACTGATCGCAAAG...CAAGGGCCCTTCATGGGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp CATCTGCAGGTTGAAGTCTTGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCCATTTCTGGGGTTAAGTaGACTTCCATGGGCGTGTAT +
Preference number: 4 (lower is better)
Translates to: HLQVEVLSLVKDDPGATSISGVK*TSMGVY
Trigger: ATACACGCCCATGGAAGTGCACTTAACCCCAGAAAT...GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp AATCAGAGTCCCAGAAATGGCACAGGTGTGCTTCCTGCTCTGAGGGTACATTCTGGGACTGCAGCGTTCTaGGCAATTCACTATCCTCTA +
Preference number: 4 (lower is better)
Translates to: NQSPRNGTGVLPALRVHSGTAAF*AIHYPL
Trigger: TAGAGGATAGTGAATTGCGCAGAACGCTGCAGTCCC...AGAATGTACCCTCAGAGCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTCGAGCGCCGAGAAGCTaGCCTTCCGCGGGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFRAPRS*PSAGPR
Trigger: ACGAGGCCCCGCGGAAGGGCAGCTTCTCGGCGCTCG...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375440.9
CDS-3UTR CCA 90 bp CAGCATCTAGGGTCTTCTTCATTGTGCACTCATGATCACACACGAGAACAAACCAGATGGAGGGCAGCGTaGAGTTCTGCAGCACATAGG +
Preference number: 4 (lower is better)
Translates to: QHLGSSSLCTHDHTREQTRWRAA*SSAAHR
Trigger: CCTATGTGCTGCAGAACTCCACGCTGCCCTCCATCT...GGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAGACCCTAGATGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp AATCAGAGTCCCAGAAATGGCACAGGTGTGCTTCCTGCTCTGAGGGTACATTCTAAGAAACAGGACAGATaGAGGGCAGCGTGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: NQSPRNGTGVLPALRVHSKKQDR*RAAWSS
Trigger: AGAACTCCACGCTGCCCTCCATCTGTCCTGTTTCTT...AGAATGTACCCTCAGAGCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326335.8
CDS-3UTR CCA 90 bp TTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCATGAAGGGCCCTTGTTAAGTGCACTTCCATaGGCGTGTATGTTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: FASFEPWLFLMFTHEGPLLSALP*ACMLAS
Trigger: ACTGGCCAACATACACGCCCATGGAAGTGCACTTAA...CAAGGGCCCTTCATGGGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp TTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCATGAAGGGCCCTTGTGGAAGAGGGACACCTaGAATTCCTTCTTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: FASFEPWLFLMFTHEGPLWKRDT*NSFFPS
Trigger: AGAAGGGAAGAAGGAATTCCAGGTGTCCCTCTTCCA...CAAGGGCCCTTCATGGGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp AGGGTGCGTCATCCATTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCTCCAATGTCCACAGCTaGATCAATCAGAGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: RVRHPFASFEPWLFLMFTSNVHS*INQSPR
Trigger: TCTGGGACTCTGATTGATCCAGCTGTGGACATTGGA...GGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
3UTR CAA 72 bp ACTGGAGGGAAAAAGATACATCTGCAGGTTGAAGTCTaGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: TGGKKIHLQVEV*SLVKDDPGATS
Trigger: GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATGTATCTTTTTCCCTCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp AAACAGGGACTGCCAGACTCAATCTTAGAATGGAAACACAAACACACTAGCCCCGGGCCTGAGTCACTCTaGTTCTGCATATGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: KQGLPDSILEWKHKHTSPGPESL*FCICCL
Trigger: CAAGCAGCATATGCAGAATCAGAGTGACTCAGGCCC...GGGGCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTCTGGCAGTCCCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp ATGGGTAGTTGTTGCAAAGTTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCAAAGTAGTTTGCCACTaGAGTTTTCGACCACTGTGC +
Preference number: 4 (lower is better)
Translates to: MGSCCKVPVPDHTRPLCAKVVCH*SFRPLC
Trigger: GCACAGTGGTCGAAAACTTCAGTGGCAAACTACTTT...GGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAACTTTGCAACAACTACCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR TCA 90 bp TTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCATGAAGGGCCCTTGGATACATCTGCAGGTTaGAGTCTTGAGCCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: FASFEPWLFLMFTHEGPLDTSAG*SLEPCE
Trigger: TTCACAAGGCTCAAGACTTCAACCTGCAGATGTATC...CAAGGGCCCTTCATGGGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp TTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCATGAAGGGCCCTTGTTTCACTCTAAATGCTaGTCATCTGAGCGAGCTGTC +
Preference number: 4 (lower is better)
Translates to: FASFEPWLFLMFTHEGPLFHSKC*SSERAV
Trigger: GACAGCTCGCTCAGATGATCAGCATTTAGAGTGAAA...CAAGGGCCCTTCATGGGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp AGGGTGCGTCATCCATTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCTCTAATGTTCACCCATaGAGGGCCCTTGTTTTCACT +
Preference number: 4 (lower is better)
Translates to: RVRHPFASFEPWLFLMFTSNVHP*RALVFT
Trigger: AGTGAAAACAAGGGCCCTTCATGGGTGAACATTAGA...GGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp TTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCATGAAGGGCCCTTGTCTAATGTTCACCCATaGAGGGCCCTTGTTTTCACT +
Preference number: 4 (lower is better)
Translates to: FASFEPWLFLMFTHEGPLSNVHP*RALVFT
Trigger: AGTGAAAACAAGGGCCCTTCATGGGTGAACATTAGA...CAAGGGCCCTTCATGGGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp CAGAGAACAAGGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATCACAAGGAACTCAGCTaGCGAACAGACGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: QRTRIVPAHDCKNQTKLYHKELS*RTDAAG
Trigger: CCCTGCTGCGTCTGTTCGTCAGCTGAGTTCCTTGTG...ATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCCTTGTTCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp GGGAGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACGCAGGTCAGACAGCATaGCCAGGAGGCTCCGCAACA +
Preference number: 4 (lower is better)
Translates to: GSSLRNLTYEKSAIKVYNAGQTA*PGGSAT
Trigger: TGTTGCGGAGCCTCCTGGGCATGCTGTCTGACCTGC...GTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp TCTTCATTGTGCACTCATGATCACACACGAGAACAAACCAAACTTGCAGCTTTTGCAGGTCAGACAGCATaGCCAGGAGGCTCCGCAACA +
Preference number: 4 (lower is better)
Translates to: SSLCTHDHTREQTKLAAFAGQTA*PGGSAT
Trigger: TGTTGCGGAGCCTCCTGGGCATGCTGTCTGACCTGC...AAAAGCTGCAAGTTTGGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp TTTCTTCAGTCACAGATTTTCATTTGCTCCTTAGATGACCTGGGTATGCAACCAATGTACTCGCTCCAGTaGTGCAGCAGCGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FLQSQIFICSLDDLGMQPMYSLQ*CSSACC
Trigger: GCAGCAGGCGCTGCTGCAGCACTGGAGCGAGTACAT...TGGTTGCATACCCAGGTCATCTAAGGAGCAAATGAAAATCTGTGACTGAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR GCA 90 bp GGGAGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACATGTACTCGCTCCAGTaGTGCAGCAGCGCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GSSLRNLTYEKSAIKVYNMYSLQ*CSSACC
Trigger: GCAGCAGGCGCTGCTGCAGCACTGGAGCGAGTACAT...GTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp TTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCATGAAGGGCCCTTGATTTCTGGGGTTAAGTaGACTTCCATGGGCGTGTAT +
Preference number: 4 (lower is better)
Translates to: FASFEPWLFLMFTHEGPLISGVK*TSMGVY
Trigger: ATACACGCCCATGGAAGTGCACTTAACCCCAGAAAT...CAAGGGCCCTTCATGGGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp AGGGTGCGTCATCCATTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCATTTCTGGGGTTAAGTaGACTTCCATGGGCGTGTAT +
Preference number: 4 (lower is better)
Translates to: RVRHPFASFEPWLFLMFTISGVK*TSMGVY
Trigger: ATACACGCCCATGGAAGTGCACTTAACCCCAGAAAT...GGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp CAGAGAACAAGGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATGGAACCGTCTGCAGATaGGTCAGGCCACGTAGTGGT +
Preference number: 4 (lower is better)
Translates to: QRTRIVPAHDCKNQTKLYGTVCR*VRPRSG
Trigger: ACCACTACGTGGCCTGACGCATCTGCAGACGGTTCC...ATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCCTTGTTCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp GGGAGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACGGCCAGTGGCTAGGGTaGGTCATCCATTCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GSSLRNLTYEKSAIKVYNGQWLG*VIHSPA
Trigger: AGCTGGCGAATGGATGACGCACCCTAGCCACTGGCC...GTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp TTTCTTCAGTCACAGATTTTCATTTGCTCCTTAGATGACCTGGGTATGCAACCACACACGGCCCCTTTGTaGCACGCCGAGTTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: FLQSQIFICSLDDLGMQPHTAPL*HAEFLC
Trigger: ACACAGGAACTCGGCGTGGCACAAAGGGGCCGTGTG...TGGTTGCATACCCAGGTCATCTAAGGAGCAAATGAAAATCTGTGACTGAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR GCA 90 bp CATCTGCAGGTTGAAGTCTTGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCCAGCATGGGTAGTTGTTaGAAAGTTCCAGTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: HLQVEVLSLVKDDPGATSSMGSC*KVPVPD
Trigger: ATCAGGAACTGGAACTTTGCAACAACTACCCATGCT...GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR GCA 90 bp CCTCTGCTTCACAACATCAAGACTTTAAGTCTCCATAAACTTTTTACAGTTTACGTCGCTGCCCTCACTTaGTGGCACGTGTGGCCGCGC +
Preference number: 4 (lower is better)
Translates to: PLLHNIKTLSLHKLFTVYVAALT*WHVWPR
Trigger: GCGCGGCCACACGTGCCAGCAAGTGAGGGCAGCGAC...GTAAACTGTAAAAAGTTTATGGAGACTTAAAGTCTTGATGTTGTGAAGCAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375441.7
CDS-3UTR GCA 90 bp ATTAACAGAGAACAAGACAAATCAGACGGTGAGACCGGACACAGCTTTTGTCCATGTCCAAAGTCGGCTTaGAGGAGGCGGCAGGATTCA +
Preference number: 4 (lower is better)
Translates to: INREQDKSDGETGHSFCPCPKSA*RRRQDS
Trigger: TGAATCCTGCCGCCTCCTGCAAGCCGACTTTGGACA...TGGACAAAAGCTGTGTCCGGTCTCACCGTCTGATTTGTCTTGTTCTCTGTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488558.2
CDS-3UTR CCA 90 bp CAGAGAACAAGGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATGGAAGGATCTGTGCCTaGACGTGGTCTTCACAGGCC +
Preference number: 4 (lower is better)
Translates to: QRTRIVPAHDCKNQTKLYGRICA*TWSSQA
Trigger: GGCCTGTGAAGACCACGTCCAGGCACAGATCCTTCC...ATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCCTTGTTCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp CATCTGCAGGTTGAAGTCTTGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCCAAGTCCAACAGGTCTTaGACCATGTCTTTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: HLQVEVLSLVKDDPGATSKSNRS*TMSLSF
Trigger: GAAAGACAAAGACATGGTCCAAGACCTGTTGGACTT...GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp CAGCATCTAGGGTCTTCTTCATTGTGCACTCATGATCACACACGAGAACAAACCCATGGGCGTGTATGTTaGCCAGTAGCCCATTGTGAG +
Preference number: 4 (lower is better)
Translates to: QHLGSSSLCTHDHTREQTHGRVC*PVAHCE
Trigger: CTCACAATGGGCTACTGGCCAACATACACGCCCATG...GGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAGACCCTAGATGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp AAACAGGGACTGCCAGACTCAATCTTAGAATGGAAACACAAACACACTAGCCCCTCAGAGTCCCAGAAATaGCACAGGTGTGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: KQGLPDSILEWKHKHTSPSESQK*HRCASC
Trigger: GCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGA...GGGGCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTCTGGCAGTCCCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp CAGCATCTAGGGTCTTCTTCATTGTGCACTCATGATCACACACGAGAACAAACCTCAGAGTCCCAGAAATaGCACAGGTGTGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: QHLGSSSLCTHDHTREQTSESQK*HRCASC
Trigger: GCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGA...GGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAGACCCTAGATGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp CAGAGAACAAGGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATACAGAGAGGGGCCAGTaGCTAGGGTGCGTCATCCAT +
Preference number: 4 (lower is better)
Translates to: QRTRIVPAHDCKNQTKLYTERGQ*LGCVIH
Trigger: ATGGATGACGCACCCTAGCCACTGGCCCCTCTCTGT...ATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCCTTGTTCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp TCTTCATTGTGCACTCATGATCACACACGAGAACAAACCAAACTTGCAGCTTTTCGGACACCATGGCCTTaGCACCTCAGGGAGCTCACT +
Preference number: 4 (lower is better)
Translates to: SSLCTHDHTREQTKLAAFRTPWP*HLRELT
Trigger: AGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCG...AAAAGCTGCAAGTTTGGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp CAGCATCTAGGGTCTTCTTCATTGTGCACTCATGATCACACACGAGAACAAACCATCCCATATCCCAGATaGAGGGCAGCGTGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: QHLGSSSLCTHDHTREQTIPYPR*RAAWSS
Trigger: AGAACTCCACGCTGCCCTCCATCTGGGATATGGGAT...GGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAGACCCTAGATGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp GGGAGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACCGGTGCTGTGTCGGATaGACGCTGTTTCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GSSLRNLTYEKSAIKVYNRCCVG*TLFPSR
Trigger: CCTGCTGGGAAACAGCGTCCATCCGACACAGCACCG...GTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375441.7
CDS-3UTR TCA 90 bp GGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTATTGCAATCCCTCGAGGTTGTACCTaGTGGAGGTGCTGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: GSSLRMTVKTKPNFIIAIPRGCT*WRCCSA
Trigger: TGCAGAGCAGCACCTCCATCAGGTACAACCTCGAGG...GATTGCAATAATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
CDS-3UTR TCA 90 bp TTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCATGAAGGGCCCTTGTGTCTTTCTCAGGATTaGTTACGATCGCTGTTCCAA +
Preference number: 4 (lower is better)
Translates to: FASFEPWLFLMFTHEGPLCLSQD*LRSLFQ
Trigger: TTGGAACAGCGATCGTAATCAATCCTGAGAAAGACA...CAAGGGCCCTTCATGGGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp TTTCTTCAGTCACAGATTTTCATTTGCTCCTTAGATGACCTGGGTATGCAACCACTTCCAGCTTGCTGGTaGAGGCTGCACCGCACTCAT +
Preference number: 4 (lower is better)
Translates to: FLQSQIFICSLDDLGMQPLPACW*RLHRTH
Trigger: ATGAGTGCGGTGCAGCCTTCACCAGCAAGCTGGAAG...TGGTTGCATACCCAGGTCATCTAAGGAGCAAATGAAAATCTGTGACTGAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR TCA 90 bp TCTTCATTGTGCACTCATGATCACACACGAGAACAAACCAAACTTGCAGCTTTTCTTCCAGCTTGCTGGTaGAGGCTGCACCGCACTCAT +
Preference number: 4 (lower is better)
Translates to: SSLCTHDHTREQTKLAAFLPACW*RLHRTH
Trigger: ATGAGTGCGGTGCAGCCTTCACCAGCAAGCTGGAAG...AAAAGCTGCAAGTTTGGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp CAGCATCTAGGGTCTTCTTCATTGTGCACTCATGATCACACACGAGAACAAACCAAAGCTCCATGTCCTTaGACATGCCTTCCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: QHLGSSSLCTHDHTREQTKAPCP*TCLPAC
Trigger: GCAAGCTGGAAGGCATGTTCAAGGACATGGAGCTTT...GGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAGACCCTAGATGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp AAACAGGGACTGCCAGACTCAATCTTAGAATGGAAACACAAACACACTAGCCCCAAAGCTCCATGTCCTTaGACATGCCTTCCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: KQGLPDSILEWKHKHTSPKAPCP*TCLPAC
Trigger: GCAAGCTGGAAGGCATGTTCAAGGACATGGAGCTTT...GGGGCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTCTGGCAGTCCCTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp AATCAGAGTCCCAGAAATGGCACAGGTGTGCTTCCTGCTCTGAGGGTACATTCTAAAGTAGTTTGCCACTaGAGTTTTCGACCACTGTGC +
Preference number: 4 (lower is better)
Translates to: NQSPRNGTGVLPALRVHSKVVCH*SFRPLC
Trigger: GCACAGTGGTCGAAAACTTCAGTGGCAAACTACTTT...AGAATGTACCCTCAGAGCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp TTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCATGAAGGGCCCTTGTGGTCGAGCCCTTTCTaGAGAATTGCTGTTAAATGT +
Preference number: 4 (lower is better)
Translates to: FASFEPWLFLMFTHEGPLWSSPF*RIAVKC
Trigger: ACATTTAACAGCAATTCTGCAGAAAGGGCTCGACCA...CAAGGGCCCTTCATGGGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp AGGGTGCGTCATCCATTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCTGGTCGAGCCCTTTCTaGAGAATTGCTGTTAAATGT +
Preference number: 4 (lower is better)
Translates to: RVRHPFASFEPWLFLMFTWSSPF*RIAVKC
Trigger: ACATTTAACAGCAATTCTGCAGAAAGGGCTCGACCA...GGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp CAGAGAACAAGGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATCTTGCTGGTGAAGGCTaGACCGCACTCATGCTTGAG +
Preference number: 4 (lower is better)
Translates to: QRTRIVPAHDCKNQTKLYLAGEG*TALMLE
Trigger: CTCAAGCATGAGTGCGGTGCAGCCTTCACCAGCAAG...ATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCCTTGTTCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp CAGCATCTAGGGTCTTCTTCATTGTGCACTCATGATCACACACGAGAACAAACCGGGACTGCAGCGTTCTaGGCAATTCACTATCCTCTA +
Preference number: 4 (lower is better)
Translates to: QHLGSSSLCTHDHTREQTGTAAF*AIHYPL
Trigger: TAGAGGATAGTGAATTGCGCAGAACGCTGCAGTCCC...GGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAGACCCTAGATGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp GGGAGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACCCACAGGCCAGGGACTaGAGCGTTCTGCGCAATTCA +
Preference number: 4 (lower is better)
Translates to: GSSLRNLTYEKSAIKVYNPQARD*SVLRNS
Trigger: TGAATTGCGCAGAACGCTGCAGTCCCTGGCCTGTGG...GTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp GGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTATTGCAATCCCACAGGCCAGGGACTaGAGCGTTCTGCGCAATTCA +
Preference number: 4 (lower is better)
Translates to: GSSLRMTVKTKPNFIIAIPQARD*SVLRNS
Trigger: TGAATTGCGCAGAACGCTGCAGTCCCTGGCCTGTGG...GATTGCAATAATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp GGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTATTGCAATCTCAGCACACGTGCTTTaGCACAGGCCAGGGACTGCA +
Preference number: 4 (lower is better)
Translates to: GSSLRMTVKTKPNFIIAISAHVL*HRPGTA
Trigger: TGCAGTCCCTGGCCTGTGGCAAAGCACGTGTGCTGA...GATTGCAATAATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp AATCAGAGTCCCAGAAATGGCACAGGTGTGCTTCCTGCTCTGAGGGTACATTCTGGGTCTTCTTCATTGTaGACTCATGATCACACACGA +
Preference number: 4 (lower is better)
Translates to: NQSPRNGTGVLPALRVHSGSSSL*THDHTR
Trigger: TCGTGTGTGATCATGAGTGCACAATGAAGAAGACCC...AGAATGTACCCTCAGAGCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp CAGAGAACAAGGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATGGGACAGGTGCTCCCTaGTCTGACTTCTGTCTAGTG +
Preference number: 4 (lower is better)
Translates to: QRTRIVPAHDCKNQTKLYGTGAP*SDFCLV
Trigger: CACTAGACAGAAGTCAGAGCAGGGAGCACCTGTCCC...ATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCCTTGTTCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CCA 90 bp GGGAGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACGGAAGGATCTGTGCCTaGACGTGGTCTTCACAGGCC +
Preference number: 4 (lower is better)
Translates to: GSSLRNLTYEKSAIKVYNGRICA*TWSSQA
Trigger: GGCCTGTGAAGACCACGTCCAGGCACAGATCCTTCC...GTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp CAGCATCTAGGGTCTTCTTCATTGTGCACTCATGATCACACACGAGAACAAACCAACCGCTCATTCTTCTaGAAGCAGACCTCGATCACG +
Preference number: 4 (lower is better)
Translates to: QHLGSSSLCTHDHTREQTNRSFF*KQTSIT
Trigger: CGTGATCGAGGTCTGCTTCCAGAAGAATGAGCGGTT...GGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAGACCCTAGATGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp GGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTATTGCAATCACAGAGAGGGGCCAGTaGCTAGGGTGCGTCATCCAT +
Preference number: 4 (lower is better)
Translates to: GSSLRMTVKTKPNFIIAITERGQ*LGCVIH
Trigger: ATGGATGACGCACCCTAGCCACTGGCCCCTCTCTGT...GATTGCAATAATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp CCTCTGCTTCACAACATCAAGACTTTAAGTCTCCATAAACTTTTTACAGTTTACGCAGGGCGGACACCATaGCCTTGGCACCTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PLLHNIKTLSLHKLFTVYAGRTP*PWHLRE
Trigger: CTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGC...GTAAACTGTAAAAAGTTTATGGAGACTTAAAGTCTTGATGTTGTGAAGCAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp AAACAGGGACTGCCAGACTCAATCTTAGAATGGAAACACAAACACACTAGCCCCCCACTTGTCACTACCTaGCCCCACTGGTATTTTGTG +
Preference number: 4 (lower is better)
Translates to: KQGLPDSILEWKHKHTSPPLVTT*PHWYFV
Trigger: CACAAAATACCAGTGGGGCCAGGTAGTGACAAGTGG...GGGGCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTCTGGCAGTCCCTGTTT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CCA 90 bp GGGAGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTGCCCTCCCATAGCTaGGACTACAGGCGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: GSSLRNLTYEKSAIKVYNLPSHS*DYRREP
Trigger: TGGCTCACGCCTGTAGTCCCAGCTATGGGAGGGCAA...GTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CCA 90 bp GGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTATTGCAATCGCCCAGCTACTCAGGTaGCTGAGAAGAGAGGATCGC +
Preference number: 4 (lower is better)
Translates to: GSSLRMTVKTKPNFIIAIAQLLR*LRREDR
Trigger: GCGATCCTCTCTTCTCAGCCACCTGAGTAGCTGGGC...GATTGCAATAATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR TCA 90 bp AATCAGAGTCCCAGAAATGGCACAGGTGTGCTTCCTGCTCTGAGGGTACATTCTTGTCTTTCTCAGGATTaGTTACGATCGCTGTTCCAA +
Preference number: 4 (lower is better)
Translates to: NQSPRNGTGVLPALRVHSCLSQD*LRSLFQ
Trigger: TTGGAACAGCGATCGTAATCAATCCTGAGAAAGACA...AGAATGTACCCTCAGAGCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp AAACAGGGACTGCCAGACTCAATCTTAGAATGGAAACACAAACACACTAGCCCCCTTTTCAGCATCGACTaGGGCACTTTTCCCAACAAG +
Preference number: 4 (lower is better)
Translates to: KQGLPDSILEWKHKHTSPLFSID*GTFPNK
Trigger: CTTGTTGGGAAAAGTGCCTCAGTCGATGCTGAAAAG...GGGGCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTCTGGCAGTCCCTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp AGGGTGCGTCATCCATTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCATATGCTGCTTGAAATaGACCATGATGTCCTTCGAA +
Preference number: 4 (lower is better)
Translates to: RVRHPFASFEPWLFLMFTICCLK*TMMSFE
Trigger: TTCGAAGGACATCATGGTTCATTTCAAGCAGCATAT...GGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp CAGAGAACAAGGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATGGGCCTGAGTCACTCTaGTTCTGCATATGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: QRTRIVPAHDCKNQTKLYGPESL*FCICCL
Trigger: CAAGCAGCATATGCAGAATCAGAGTGACTCAGGCCC...ATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCCTTGTTCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp CAGCATCTAGGGTCTTCTTCATTGTGCACTCATGATCACACACGAGAACAAACCCATTCTAGTGTTTCATaGAGGGGAACCGTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: QHLGSSSLCTHDHTREQTHSSVS*RGTVCR
Trigger: TCTGCAGACGGTTCCCCTTCATGAAACACTAGAATG...GGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAGACCCTAGATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp AAACAGGGACTGCCAGACTCAATCTTAGAATGGAAACACAAACACACTAGCCCCGTGTGCTTCCTGCTCTaGGGGTACATTCTAGTGTTT +
Preference number: 4 (lower is better)
Translates to: KQGLPDSILEWKHKHTSPVCFLL*GYILVF
Trigger: AAACACTAGAATGTACCCTCAGAGCAGGAAGCACAC...GGGGCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTCTGGCAGTCCCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp CAGCATCTAGGGTCTTCTTCATTGTGCACTCATGATCACACACGAGAACAAACCTCCATTCGCCAGCTTTaGACCCTGGCTCTTTCTAAT +
Preference number: 4 (lower is better)
Translates to: QHLGSSSLCTHDHTREQTSIRQL*TLALSN
Trigger: ATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGA...GGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAGACCCTAGATGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp AATCAGAGTCCCAGAAATGGCACAGGTGTGCTTCCTGCTCTGAGGGTACATTCTGCTCACTTAGAAACCTaGCTTACGAAAAATCAGCCA +
Preference number: 4 (lower is better)
Translates to: NQSPRNGTGVLPALRVHSAHLET*LTKNQP
Trigger: TGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGC...AGAATGTACCCTCAGAGCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp CATCTGCAGGTTGAAGTCTTGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCCGCTGCTAAAGAGTTATaGAGAATGTGTCATTTGCAT +
Preference number: 4 (lower is better)
Translates to: HLQVEVLSLVKDDPGATSAAKEL*RMCHLH
Trigger: ATGCAAATGACACATTCTTCATAACTCTTTAGCAGC...GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR TCA 90 bp AAACAGGGACTGCCAGACTCAATCTTAGAATGGAAACACAAACACACTAGCCCCGCCACTGTGCTCAAATaGAACAAAGGCACAGCACAA +
Preference number: 4 (lower is better)
Translates to: KQGLPDSILEWKHKHTSPATVLK*NKGTAQ
Trigger: TTGTGCTGTGCCTTTGTTTCATTTGAGCACAGTGGC...GGGGCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTCTGGCAGTCCCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR TCA 90 bp AGGGTGCGTCATCCATTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCGTCTGGTTAACTTGGTaGATTCTTTCTTCAGTCACA +
Preference number: 4 (lower is better)
Translates to: RVRHPFASFEPWLFLMFTVWLTW*ILSSVT
Trigger: TGTGACTGAAGAAAGAATTCACCAAGTTAACCAGAC...GGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR TCA 90 bp ACTACATTAACAGAGAACAAGACAAATCAGACGGTGAGACCGGACACAGCTTTTACAGTCCCCGAAAGATaGCGGACGATGAGTGCTATG +
Preference number: 4 (lower is better)
Translates to: TTLTENKTNQTVRPDTAFTVPER*RTMSAM
Trigger: CATAGCACTCATCGTCCGTCATCTTTCGGGGACTGT...AAAAGCTGTGTCCGGTCTCACCGTCTGATTTGTCTTGTTCTCTGTTAATGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488558.2
CDS-3UTR GCA 90 bp AAACAGGGACTGCCAGACTCAATCTTAGAATGGAAACACAAACACACTAGCCCCGAATCTTTATACACCTaGAGGTCAGACAGCATGCCC +
Preference number: 4 (lower is better)
Translates to: KQGLPDSILEWKHKHTSPESLYT*RSDSMP
Trigger: GGGCATGCTGTCTGACCTGCAGGTGTATAAAGATTC...GGGGCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTCTGGCAGTCCCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp AATCAGAGTCCCAGAAATGGCACAGGTGTGCTTCCTGCTCTGAGGGTACATTCTTGGTCGAGCCCTTTCTaGAGAATTGCTGTTAAATGT +
Preference number: 4 (lower is better)
Translates to: NQSPRNGTGVLPALRVHSWSSPF*RIAVKC
Trigger: ACATTTAACAGCAATTCTGCAGAAAGGGCTCGACCA...AGAATGTACCCTCAGAGCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp GGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTATTGCAATCCAGCTGGTACATCTGTaGGAGGTCCGGCACTCTGTT +
Preference number: 4 (lower is better)
Translates to: GSSLRMTVKTKPNFIIAIQLVHL*EVRHSV
Trigger: AACAGAGTGCCGGACCTCGCACAGATGTACCAGCTG...GATTGCAATAATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp GGGAGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACCAGCTGGTACATCTGTaGGAGGTCCGGCACTCTGTT +
Preference number: 4 (lower is better)
Translates to: GSSLRNLTYEKSAIKVYNQLVHL*EVRHSV
Trigger: AACAGAGTGCCGGACCTCGCACAGATGTACCAGCTG...GTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp CAGCATCTAGGGTCTTCTTCATTGTGCACTCATGATCACACACGAGAACAAACCCTTTGCGATCAGTTCTaGAGGCTTGTTGGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: QHLGSSSLCTHDHTREQTLCDQF*RLVGSL
Trigger: AAGAGACCCAACAAGCCTGCAGAACTGATCGCAAAG...GGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAGACCCTAGATGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp TTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCATGAAGGGCCCTTGAACTTTGAATCCACATaGTTTGCGATCAGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: FASFEPWLFLMFTHEGPLNFEST*FAISSA
Trigger: TGCAGAACTGATCGCAAAGCATGTGGATTCAAAGTT...CAAGGGCCCTTCATGGGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp GGGAGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACCTTGCTGGTGAAGGCTaGACCGCACTCATGCTTGAG +
Preference number: 4 (lower is better)
Translates to: GSSLRNLTYEKSAIKVYNLAGEG*TALMLE
Trigger: CTCAAGCATGAGTGCGGTGCAGCCTTCACCAGCAAG...GTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp TTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCATGAAGGGCCCTTGTCACAGATTTTCATTTaGTCCTTAGATGACCTGGGT +
Preference number: 4 (lower is better)
Translates to: FASFEPWLFLMFTHEGPLSQIFI*SLDDLG
Trigger: ACCCAGGTCATCTAAGGAGCAAATGAAAATCTGTGA...CAAGGGCCCTTCATGGGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CCA 90 bp AATCAGAGTCCCAGAAATGGCACAGGTGTGCTTCCTGCTCTGAGGGTACATTCTTTGCTTGTAGAGCATTaGGGAGACTTTGTGAGAACA +
Preference number: 4 (lower is better)
Translates to: NQSPRNGTGVLPALRVHSLLVEH*GDFVRT
Trigger: TGTTCTCACAAAGTCTCCCCAATGCTCTACAAGCAA...AGAATGTACCCTCAGAGCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp GGGAGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACAGATGGAGGGCAGCGTaGAGTTCTGCAGCACATAGG +
Preference number: 4 (lower is better)
Translates to: GSSLRNLTYEKSAIKVYNRWRAA*SSAAHR
Trigger: CCTATGTGCTGCAGAACTCCACGCTGCCCTCCATCT...GTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp TTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCATGAAGGGCCCTTGAAGACATCTTTACCGTaGATAAACCTGAACAGGATC +
Preference number: 4 (lower is better)
Translates to: FASFEPWLFLMFTHEGPLKTSLP*INLNRI
Trigger: GATCCTGTTCAGGTTTATCCACGGTAAAGATGTCTT...CAAGGGCCCTTCATGGGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp CAGAGAACAAGGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATCATGGGCGTGTATGTTaGCCAGTAGCCCATTGTGAG +
Preference number: 4 (lower is better)
Translates to: QRTRIVPAHDCKNQTKLYHGRVC*PVAHCE
Trigger: CTCACAATGGGCTACTGGCCAACATACACGCCCATG...ATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCCTTGTTCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp AAACAGGGACTGCCAGACTCAATCTTAGAATGGAAACACAAACACACTAGCCCCTTAAGTGCACTTCCATaGGCGTGTATGTTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: KQGLPDSILEWKHKHTSPLSALP*ACMLAS
Trigger: ACTGGCCAACATACACGCCCATGGAAGTGCACTTAA...GGGGCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTCTGGCAGTCCCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp CATCTGCAGGTTGAAGTCTTGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCCGACTCAATCTTAGAATaGAAACACAAACACACTAGC +
Preference number: 4 (lower is better)
Translates to: HLQVEVLSLVKDDPGATSDSILE*KHKHTS
Trigger: GCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTC...GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp TTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCACGCCGAGTTCCTGTGTATTATTTGGCTTATTTGTaGACTTTCTTGTTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: FQFLITHGPFVPRRVPVYYLAYL*TFLFQE
Trigger: TTCCTGGAACAAGAAAGTCCACAAATAAGCCAAATA...ATACACAGGAACTCGGCGTGGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR TCA 90 bp GGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTATTGCAATCGGTCCACCTTGTCCTTaGAGTCCAACAGGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: GSSLRMTVKTKPNFIIAIGPPCP*SPTGLG
Trigger: TCCAAGACCTGTTGGACTTCAAGGACAAGGTGGACC...GATTGCAATAATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp GGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTATTGCAATCGGGCCTGAGTCACTCTaGTTCTGCATATGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: GSSLRMTVKTKPNFIIAIGPESL*FCICCL
Trigger: CAAGCAGCATATGCAGAATCAGAGTGACTCAGGCCC...GATTGCAATAATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp AAACAGGGACTGCCAGACTCAATCTTAGAATGGAAACACAAACACACTAGCCCCGATACATCTGCAGGTTaGAGTCTTGAGCCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: KQGLPDSILEWKHKHTSPDTSAG*SLEPCE
Trigger: TTCACAAGGCTCAAGACTTCAACCTGCAGATGTATC...GGGGCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTCTGGCAGTCCCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp CAGCATCTAGGGTCTTCTTCATTGTGCACTCATGATCACACACGAGAACAAACCTTTCACTCTAAATGCTaGTCATCTGAGCGAGCTGTC +
Preference number: 4 (lower is better)
Translates to: QHLGSSSLCTHDHTREQTFHSKC*SSERAV
Trigger: GACAGCTCGCTCAGATGATCAGCATTTAGAGTGAAA...GGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAGACCCTAGATGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp GGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTATTGCAATCAGGTGCTCCCTGCTCTaGCTTCTGTCTAGTGCACTA +
Preference number: 4 (lower is better)
Translates to: GSSLRMTVKTKPNFIIAIRCSLL*LLSSAL
Trigger: TAGTGCACTAGACAGAAGTCAGAGCAGGGAGCACCT...GATTGCAATAATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR TCA 90 bp AATCAGAGTCCCAGAAATGGCACAGGTGTGCTTCCTGCTCTGAGGGTACATTCTTTTGGGGGTTGCTATTaGAAAAATGACTTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: NQSPRNGTGVLPALRVHSFGGCY*KNDFWS
Trigger: TGACCAGAAGTCATTTTTTCAATAGCAACCCCCAAA...AGAATGTACCCTCAGAGCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR TCA 90 bp GGGAGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACCAAAGTTCCAGTTCCTaGTCACACACGGCCCCTTTG +
Preference number: 4 (lower is better)
Translates to: GSSLRNLTYEKSAIKVYNQSSSS*SHTAPL
Trigger: CAAAGGGGCCGTGTGTGATCAGGAACTGGAACTTTG...GTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR TCA 90 bp TTTCTTCAGTCACAGATTTTCATTTGCTCCTTAGATGACCTGGGTATGCAACCACAAAGTTCCAGTTCCTaGTCACACACGGCCCCTTTG +
Preference number: 4 (lower is better)
Translates to: FLQSQIFICSLDDLGMQPQSSSS*SHTAPL
Trigger: CAAAGGGGCCGTGTGTGATCAGGAACTGGAACTTTG...TGGTTGCATACCCAGGTCATCTAAGGAGCAAATGAAAATCTGTGACTGAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR TCA 90 bp GGGAGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACAGATTTTCCACAGCCTaGTGGAGGTGCTGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: GSSLRNLTYEKSAIKVYNRFSTA*WRCCSA
Trigger: TGCAGAGCAGCACCTCCATCAGGCTGTGGAAAATCT...GTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617546.4
CDS-3UTR GCA 90 bp AAACAGGGACTGCCAGACTCAATCTTAGAATGGAAACACAAACACACTAGCCCCATTTCTGGGGTTAAGTaGACTTCCATGGGCGTGTAT +
Preference number: 4 (lower is better)
Translates to: KQGLPDSILEWKHKHTSPISGVK*TSMGVY
Trigger: ATACACGCCCATGGAAGTGCACTTAACCCCAGAAAT...GGGGCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTCTGGCAGTCCCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp CATCTGCAGGTTGAAGTCTTGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCCAGAACAAACCAAACTTaGAGCTTTTTGACACAAGAA +
Preference number: 4 (lower is better)
Translates to: HLQVEVLSLVKDDPGATSRTNQT*SFLTQE
Trigger: TTCTTGTGTCAAAAAGCTGCAAGTTTGGTTTGTTCT...GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp CAGCATCTAGGGTCTTCTTCATTGTGCACTCATGATCACACACGAGAACAAACCGGGTCTTCTTCATTGTaGACTCATGATCACACACGA +
Preference number: 4 (lower is better)
Translates to: QHLGSSSLCTHDHTREQTGSSSL*THDHTR
Trigger: TCGTGTGTGATCATGAGTGCACAATGAAGAAGACCC...GGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAGACCCTAGATGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp TTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCATGAAGGGCCCTTGCCACAAAATAACCTCTaGTTCACAACATCAAGACTT +
Preference number: 4 (lower is better)
Translates to: FASFEPWLFLMFTHEGPLPQNNL*FTTSRL
Trigger: AAGTCTTGATGTTGTGAAGCAGAGGTTATTTTGTGG...CAAGGGCCCTTCATGGGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp CATCTGCAGGTTGAAGTCTTGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCCGTAGGATTCCATCAATaGTTTTACTCTGAACCATTT +
Preference number: 4 (lower is better)
Translates to: HLQVEVLSLVKDDPGATSVGFHQ*FYSEPF
Trigger: AAATGGTTCAGAGTAAAACCATTGATGGAATCCTAC...GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp CAGCATCTAGGGTCTTCTTCATTGTGCACTCATGATCACACACGAGAACAAACCTCCTGCATTAACCTTTaGCCTTCGGCAGCATATAAG +
Preference number: 4 (lower is better)
Translates to: QHLGSSSLCTHDHTREQTSCINL*PSAAYK
Trigger: CTTATATGCTGCCGAAGGCCAAAGGTTAATGCAGGA...GGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAGACCCTAGATGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp GGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTATTGCAATCCAGACCTCGATCACGTaGTCCACCTTGTCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: GSSLRMTVKTKPNFIIAIQTSIT*STLSLK
Trigger: CTTCAAGGACAAGGTGGACCACGTGATCGAGGTCTG...GATTGCAATAATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp AATCAGAGTCCCAGAAATGGCACAGGTGTGCTTCCTGCTCTGAGGGTACATTCTAAGACATCTTTACCGTaGATAAACCTGAACAGGATC +
Preference number: 4 (lower is better)
Translates to: NQSPRNGTGVLPALRVHSKTSLP*INLNRI
Trigger: GATCCTGTTCAGGTTTATCCACGGTAAAGATGTCTT...AGAATGTACCCTCAGAGCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp GGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTATTGCAATCCATGGGCGTGTATGTTaGCCAGTAGCCCATTGTGAG +
Preference number: 4 (lower is better)
Translates to: GSSLRMTVKTKPNFIIAIHGRVC*PVAHCE
Trigger: CTCACAATGGGCTACTGGCCAACATACACGCCCATG...GATTGCAATAATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp CCTCTGCTTCACAACATCAAGACTTTAAGTCTCCATAAACTTTTTACAGTTTACCGGACACCATGGCCTTaGCACCTCAGGGAGCTCACT +
Preference number: 4 (lower is better)
Translates to: PLLHNIKTLSLHKLFTVYRTPWP*HLRELT
Trigger: AGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCG...GTAAACTGTAAAAAGTTTATGGAGACTTAAAGTCTTGATGTTGTGAAGCAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp AGGGTGCGTCATCCATTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCGACTCAATCTTAGAATaGAAACACAAACACACTAGC +
Preference number: 4 (lower is better)
Translates to: RVRHPFASFEPWLFLMFTDSILE*KHKHTS
Trigger: GCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTC...GGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp TTTCTTCAGTCACAGATTTTCATTTGCTCCTTAGATGACCTGGGTATGCAACCACTTGGGAGACTGAGGTaGGAGAACTGCTTGAACCCA +
Preference number: 4 (lower is better)
Translates to: FLQSQIFICSLDDLGMQPLGRLR*ENCLNP
Trigger: TGGGTTCAAGCAGTTCTCCCACCTCAGTCTCCCAAG...TGGTTGCATACCCAGGTCATCTAAGGAGCAAATGAAAATCTGTGACTGAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CCA 90 bp AGGGTGCGTCATCCATTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCGAGTTCCTGTGTATTTaGCTTATTTGTGGACTTTCT +
Preference number: 4 (lower is better)
Translates to: RVRHPFASFEPWLFLMFTEFLCI*LICGLS
Trigger: AGAAAGTCCACAAATAAGCCAAATACACAGGAACTC...GGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR TCA 90 bp CAGCATCTAGGGTCTTCTTCATTGTGCACTCATGATCACACACGAGAACAAACCTGTCTTTCTCAGGATTaGTTACGATCGCTGTTCCAA +
Preference number: 4 (lower is better)
Translates to: QHLGSSSLCTHDHTREQTCLSQD*LRSLFQ
Trigger: TTGGAACAGCGATCGTAATCAATCCTGAGAAAGACA...GGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAGACCCTAGATGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp CAGAGAACAAGGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATCTTTTCAGCATCGACTaGGGCACTTTTCCCAACAAG +
Preference number: 4 (lower is better)
Translates to: QRTRIVPAHDCKNQTKLYLFSID*GTFPNK
Trigger: CTTGTTGGGAAAAGTGCCTCAGTCGATGCTGAAAAG...ATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCCTTGTTCTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTCTTCCAGCTTGCTGGTaGAGGCTGCACCGCACTCAT +
Preference number: 4 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFLPACW*RLHRTH
Trigger: ATGAGTGCGGTGCAGCCTTCACCAGCAAGCTGGAAG...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp CCTCTGCTTCACAACATCAAGACTTTAAGTCTCCATAAACTTTTTACAGTTTACCTTCCAGCTTGCTGGTaGAGGCTGCACCGCACTCAT +
Preference number: 4 (lower is better)
Translates to: PLLHNIKTLSLHKLFTVYLPACW*RLHRTH
Trigger: ATGAGTGCGGTGCAGCCTTCACCAGCAAGCTGGAAG...GTAAACTGTAAAAAGTTTATGGAGACTTAAAGTCTTGATGTTGTGAAGCAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp GGGAGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACAAAGCTCCATGTCCTTaGACATGCCTTCCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: GSSLRNLTYEKSAIKVYNKAPCP*TCLPAC
Trigger: GCAAGCTGGAAGGCATGTTCAAGGACATGGAGCTTT...GTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp TTTCTTCAGTCACAGATTTTCATTTGCTCCTTAGATGACCTGGGTATGCAACCAGAGGTCTATAGGGCCTaGGTCACTCTGATTCTGCAT +
Preference number: 4 (lower is better)
Translates to: FLQSQIFICSLDDLGMQPEVYRA*VTLILH
Trigger: ATGCAGAATCAGAGTGACTCAGGCCCTATAGACCTC...TGGTTGCATACCCAGGTCATCTAAGGAGCAAATGAAAATCTGTGACTGAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR TCA 90 bp GGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTATTGCAATCGAGGTCTATAGGGCCTaGGTCACTCTGATTCTGCAT +
Preference number: 4 (lower is better)
Translates to: GSSLRMTVKTKPNFIIAIEVYRA*VTLILH
Trigger: ATGCAGAATCAGAGTGACTCAGGCCCTATAGACCTC...GATTGCAATAATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp CAGAGAACAAGGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATCATTCTAGTGTTTCATaGAGGGGAACCGTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: QRTRIVPAHDCKNQTKLYHSSVS*RGTVCR
Trigger: TCTGCAGACGGTTCCCCTTCATGAAACACTAGAATG...ATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCCTTGTTCTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTGAGCCTTGTGAAAGATaGCCCAGGAGCCACCTCCCT +
Preference number: 4 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFEPCER*PRSHLP
Trigger: AGGGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTC...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp CAGCATCTAGGGTCTTCTTCATTGTGCACTCATGATCACACACGAGAACAAACCTTCATTGTGCACTCATaGTCACACACGAGAACAAAC +
Preference number: 4 (lower is better)
Translates to: QHLGSSSLCTHDHTREQTFIVHS*SHTRTN
Trigger: GTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAA...GGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAGACCCTAGATGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp TCTTCATTGTGCACTCATGATCACACACGAGAACAAACCAAACTTGCAGCTTTTAAACGGAAGGATCTGTaGCTGGACGTGGTCTTCACA +
Preference number: 4 (lower is better)
Translates to: SSLCTHDHTREQTKLAAFKRKDL*LDVVFT
Trigger: TGTGAAGACCACGTCCAGGCACAGATCCTTCCGTTT...AAAAGCTGCAAGTTTGGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp GGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTATTGCAATCAAACGGAAGGATCTGTaGCTGGACGTGGTCTTCACA +
Preference number: 4 (lower is better)
Translates to: GSSLRMTVKTKPNFIIAIKRKDL*LDVVFT
Trigger: TGTGAAGACCACGTCCAGGCACAGATCCTTCCGTTT...GATTGCAATAATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp TCTTCATTGTGCACTCATGATCACACACGAGAACAAACCAAACTTGCAGCTTTTTCTGCAGCACATAGGTaGGGTCCAAGAACAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SSLCTHDHTREQTKLAAFSAAHR*GPRTGR
Trigger: TCTTCCTGTTCTTGGACCGCACCTATGTGCTGCAGA...AAAAGCTGCAAGTTTGGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp AAACAGGGACTGCCAGACTCAATCTTAGAATGGAAACACAAACACACTAGCCCCTGGTCGAGCCCTTTCTaGAGAATTGCTGTTAAATGT +
Preference number: 4 (lower is better)
Translates to: KQGLPDSILEWKHKHTSPWSSPF*RIAVKC
Trigger: ACATTTAACAGCAATTCTGCAGAAAGGGCTCGACCA...GGGGCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTCTGGCAGTCCCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp TCTTCATTGTGCACTCATGATCACACACGAGAACAAACCAAACTTGCAGCTTTTGGGACTGCAGCGTTCTaGGCAATTCACTATCCTCTA +
Preference number: 4 (lower is better)
Translates to: SSLCTHDHTREQTKLAAFGTAAF*AIHYPL
Trigger: TAGAGGATAGTGAATTGCGCAGAACGCTGCAGTCCC...AAAAGCTGCAAGTTTGGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp CCTCTGCTTCACAACATCAAGACTTTAAGTCTCCATAAACTTTTTACAGTTTACCCACAGGCCAGGGACTaGAGCGTTCTGCGCAATTCA +
Preference number: 4 (lower is better)
Translates to: PLLHNIKTLSLHKLFTVYPQARD*SVLRNS
Trigger: TGAATTGCGCAGAACGCTGCAGTCCCTGGCCTGTGG...GTAAACTGTAAAAAGTTTATGGAGACTTAAAGTCTTGATGTTGTGAAGCAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp CCTCTGCTTCACAACATCAAGACTTTAAGTCTCCATAAACTTTTTACAGTTTACGGAACCGTCTGCAGATaGGTCAGGCCACGTAGTGGT +
Preference number: 4 (lower is better)
Translates to: PLLHNIKTLSLHKLFTVYGTVCR*VRPRSG
Trigger: ACCACTACGTGGCCTGACGCATCTGCAGACGGTTCC...GTAAACTGTAAAAAGTTTATGGAGACTTAAAGTCTTGATGTTGTGAAGCAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTGGAACCGTCTGCAGATaGGTCAGGCCACGTAGTGGT +
Preference number: 4 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFGTVCR*VRPRSG
Trigger: ACCACTACGTGGCCTGACGCATCTGCAGACGGTTCC...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp AATCAGAGTCCCAGAAATGGCACAGGTGTGCTTCCTGCTCTGAGGGTACATTCTCCACAAAATAACCTCTaGTTCACAACATCAAGACTT +
Preference number: 4 (lower is better)
Translates to: NQSPRNGTGVLPALRVHSPQNNL*FTTSRL
Trigger: AAGTCTTGATGTTGTGAAGCAGAGGTTATTTTGTGG...AGAATGTACCCTCAGAGCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp CCTCTGCTTCACAACATCAAGACTTTAAGTCTCCATAAACTTTTTACAGTTTACACGATCCTCCCACCTTaGCCTCCCATAGCTGGGACT +
Preference number: 4 (lower is better)
Translates to: PLLHNIKTLSLHKLFTVYTILPP*PPIAGT
Trigger: AGTCCCAGCTATGGGAGGGCAAGGTGGGAGGATCGT...GTAAACTGTAAAAAGTTTATGGAGACTTAAAGTCTTGATGTTGTGAAGCAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CCA 90 bp CCTCTGCTTCACAACATCAAGACTTTAAGTCTCCATAAACTTTTTACAGTTTACACCCGGCTGAACAGCTaGTACATCTGTGCGAGGTCC +
Preference number: 4 (lower is better)
Translates to: PLLHNIKTLSLHKLFTVYTRLNS*YICARS
Trigger: GGACCTCGCACAGATGTACCAGCTGTTCAGCCGGGT...GTAAACTGTAAAAAGTTTATGGAGACTTAAAGTCTTGATGTTGTGAAGCAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp AAACAGGGACTGCCAGACTCAATCTTAGAATGGAAACACAAACACACTAGCCCCAAGTCCAACAGGTCTTaGACCATGTCTTTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: KQGLPDSILEWKHKHTSPKSNRS*TMSLSF
Trigger: GAAAGACAAAGACATGGTCCAAGACCTGTTGGACTT...GGGGCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTCTGGCAGTCCCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp GGGAGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACAACCGCTCATTCTTCTaGAAGCAGACCTCGATCACG +
Preference number: 4 (lower is better)
Translates to: GSSLRNLTYEKSAIKVYNNRSFF*KQTSIT
Trigger: CGTGATCGAGGTCTGCTTCCAGAAGAATGAGCGGTT...GTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp TCTTCATTGTGCACTCATGATCACACACGAGAACAAACCAAACTTGCAGCTTTTAACCGCTCATTCTTCTaGAAGCAGACCTCGATCACG +
Preference number: 4 (lower is better)
Translates to: SSLCTHDHTREQTKLAAFNRSFF*KQTSIT
Trigger: CGTGATCGAGGTCTGCTTCCAGAAGAATGAGCGGTT...AAAAGCTGCAAGTTTGGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp GGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTATTGCAATCAACCGCTCATTCTTCTaGAAGCAGACCTCGATCACG +
Preference number: 4 (lower is better)
Translates to: GSSLRMTVKTKPNFIIAINRSFF*KQTSIT
Trigger: CGTGATCGAGGTCTGCTTCCAGAAGAATGAGCGGTT...GATTGCAATAATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp CAGAGAACAAGGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTTAAGTGCACTTCCATaGGCGTGTATGTTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: QRTRIVPAHDCKNQTKLYLSALP*ACMLAS
Trigger: ACTGGCCAACATACACGCCCATGGAAGTGCACTTAA...ATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCCTTGTTCTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp GGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTATTGCAATCACTACCTGGCCCCACTaGTATTTTGTGGTAGAGGTG +
Preference number: 4 (lower is better)
Translates to: GSSLRMTVKTKPNFIIAITTWPH*YFVVEV
Trigger: CACCTCTACCACAAAATACCAGTGGGGCCAGGTAGT...GATTGCAATAATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CCA 90 bp TTTCTTCAGTCACAGATTTTCATTTGCTCCTTAGATGACCTGGGTATGCAACCACCACTTGTCACTACCTaGCCCCACTGGTATTTTGTG +
Preference number: 4 (lower is better)
Translates to: FLQSQIFICSLDDLGMQPPLVTT*PHWYFV
Trigger: CACAAAATACCAGTGGGGCCAGGTAGTGACAAGTGG...TGGTTGCATACCCAGGTCATCTAAGGAGCAAATGAAAATCTGTGACTGAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CCA 90 bp TTTCTTCAGTCACAGATTTTCATTTGCTCCTTAGATGACCTGGGTATGCAACCACTATGGTGCTCAGGATaGTCTGGAACTCAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: FLQSQIFICSLDDLGMQPLWCSG*SGTQAQ
Trigger: TTGAGCCTGAGTTCCAGACCATCCTGAGCACCATAG...TGGTTGCATACCCAGGTCATCTAAGGAGCAAATGAAAATCTGTGACTGAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CCA 90 bp TTTCTTCAGTCACAGATTTTCATTTGCTCCTTAGATGACCTGGGTATGCAACCAAACAGGATCTCCCTATaGTGCTCAGGATGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: FLQSQIFICSLDDLGMQPNRISL*CSGWSG
Trigger: TCCAGACCATCCTGAGCACCATAGGGAGATCCTGTT...TGGTTGCATACCCAGGTCATCTAAGGAGCAAATGAAAATCTGTGACTGAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR TCA 90 bp GGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTATTGCAATCCTGTTCCAAAAGTCTTaGTGTACTCGCTCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: GSSLRMTVKTKPNFIIAILFQKS*CTRSSA
Trigger: AGCACTGGAGCGAGTACATCAAGACTTTTGGAACAG...GATTGCAATAATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp GGGAGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACACTCCTTCATCAGGTTaGCGAACCGCTCATTCTTCT +
Preference number: 4 (lower is better)
Translates to: GSSLRNLTYEKSAIKVYNTPSSG*RTAHSS
Trigger: AGAAGAATGAGCGGTTCGTCAACCTGATGAAGGAGT...GTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp GGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTATTGCAATCACTCCTTCATCAGGTTaGCGAACCGCTCATTCTTCT +
Preference number: 4 (lower is better)
Translates to: GSSLRMTVKTKPNFIIAITPSSG*RTAHSS
Trigger: AGAAGAATGAGCGGTTCGTCAACCTGATGAAGGAGT...GATTGCAATAATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp GGGAGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACCTTTTCAGCATCGACTaGGGCACTTTTCCCAACAAG +
Preference number: 4 (lower is better)
Translates to: GSSLRNLTYEKSAIKVYNLFSID*GTFPNK
Trigger: CTTGTTGGGAAAAGTGCCTCAGTCGATGCTGAAAAG...GTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp TCTTCATTGTGCACTCATGATCACACACGAGAACAAACCAAACTTGCAGCTTTTCATTCTAGTGTTTCATaGAGGGGAACCGTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SSLCTHDHTREQTKLAAFHSSVS*RGTVCR
Trigger: TCTGCAGACGGTTCCCCTTCATGAAACACTAGAATG...AAAAGCTGCAAGTTTGGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp GGGAGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACGTGTGCTTCCTGCTCTaGGGGTACATTCTAGTGTTT +
Preference number: 4 (lower is better)
Translates to: GSSLRNLTYEKSAIKVYNVCFLL*GYILVF
Trigger: AAACACTAGAATGTACCCTCAGAGCAGGAAGCACAC...GTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp CAGAGAACAAGGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTCTAATGTTCACCCATaGAGGGCCCTTGTTTTCACT +
Preference number: 4 (lower is better)
Translates to: QRTRIVPAHDCKNQTKLYSNVHP*RALVFT
Trigger: AGTGAAAACAAGGGCCCTTCATGGGTGAACATTAGA...ATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCCTTGTTCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp AAACAGGGACTGCCAGACTCAATCTTAGAATGGAAACACAAACACACTAGCCCCTTTGGGGGTTGCTATTaGAAAAATGACTTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: KQGLPDSILEWKHKHTSPFGGCY*KNDFWS
Trigger: TGACCAGAAGTCATTTTTTCAATAGCAACCCCCAAA...GGGGCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTCTGGCAGTCCCTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR GCA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTCAGCTGGTACATCTGTaGGAGGTCCGGCACTCTGTT +
Preference number: 4 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFQLVHL*EVRHSV
Trigger: AACAGAGTGCCGGACCTCGCACAGATGTACCAGCTG...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp TCTTCATTGTGCACTCATGATCACACACGAGAACAAACCAAACTTGCAGCTTTTCTTTGCGATCAGTTCTaGAGGCTTGTTGGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: SSLCTHDHTREQTKLAAFLCDQF*RLVGSL
Trigger: AAGAGACCCAACAAGCCTGCAGAACTGATCGCAAAG...AAAAGCTGCAAGTTTGGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp GGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTATTGCAATCCTTTGCGATCAGTTCTaGAGGCTTGTTGGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: GSSLRMTVKTKPNFIIAILCDQF*RLVGSL
Trigger: AAGAGACCCAACAAGCCTGCAGAACTGATCGCAAAG...GATTGCAATAATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp CCTCTGCTTCACAACATCAAGACTTTAAGTCTCCATAAACTTTTTACAGTTTACCTTGCTGGTGAAGGCTaGACCGCACTCATGCTTGAG +
Preference number: 4 (lower is better)
Translates to: PLLHNIKTLSLHKLFTVYLAGEG*TALMLE
Trigger: CTCAAGCATGAGTGCGGTGCAGCCTTCACCAGCAAG...GTAAACTGTAAAAAGTTTATGGAGACTTAAAGTCTTGATGTTGTGAAGCAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp AATCAGAGTCCCAGAAATGGCACAGGTGTGCTTCCTGCTCTGAGGGTACATTCTAGAACAAACCAAACTTaGAGCTTTTTGACACAAGAA +
Preference number: 4 (lower is better)
Translates to: NQSPRNGTGVLPALRVHSRTNQT*SFLTQE
Trigger: TTCTTGTGTCAAAAAGCTGCAAGTTTGGTTTGTTCT...AGAATGTACCCTCAGAGCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp CCTCTGCTTCACAACATCAAGACTTTAAGTCTCCATAAACTTTTTACAGTTTACAGATGGAGGGCAGCGTaGAGTTCTGCAGCACATAGG +
Preference number: 4 (lower is better)
Translates to: PLLHNIKTLSLHKLFTVYRWRAA*SSAAHR
Trigger: CCTATGTGCTGCAGAACTCCACGCTGCCCTCCATCT...GTAAACTGTAAAAAGTTTATGGAGACTTAAAGTCTTGATGTTGTGAAGCAGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp CAGCATCTAGGGTCTTCTTCATTGTGCACTCATGATCACACACGAGAACAAACCAAGACATCTTTACCGTaGATAAACCTGAACAGGATC +
Preference number: 4 (lower is better)
Translates to: QHLGSSSLCTHDHTREQTKTSLP*INLNRI
Trigger: GATCCTGTTCAGGTTTATCCACGGTAAAGATGTCTT...GGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAGACCCTAGATGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp AAACAGGGACTGCCAGACTCAATCTTAGAATGGAAACACAAACACACTAGCCCCAAGACATCTTTACCGTaGATAAACCTGAACAGGATC +
Preference number: 4 (lower is better)
Translates to: KQGLPDSILEWKHKHTSPKTSLP*INLNRI
Trigger: GATCCTGTTCAGGTTTATCCACGGTAAAGATGTCTT...GGGGCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTCTGGCAGTCCCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp GGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTATTGCAATCTGGAAGAGGGACACCTaGAATTCCTTCTTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: GSSLRMTVKTKPNFIIAIWKRDT*NSFFPS
Trigger: AGAAGGGAAGAAGGAATTCCAGGTGTCCCTCTTCCA...GATTGCAATAATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp TTTCTTCAGTCACAGATTTTCATTTGCTCCTTAGATGACCTGGGTATGCAACCATCCAATGTCCACAGCTaGATCAATCAGAGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: FLQSQIFICSLDDLGMQPSNVHS*INQSPR
Trigger: TCTGGGACTCTGATTGATCCAGCTGTGGACATTGGA...TGGTTGCATACCCAGGTCATCTAAGGAGCAAATGAAAATCTGTGACTGAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR TCA 90 bp CCTCTGCTTCACAACATCAAGACTTTAAGTCTCCATAAACTTTTTACAGTTTACGGTCCACCTTGTCCTTaGAGTCCAACAGGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: PLLHNIKTLSLHKLFTVYGPPCP*SPTGLG
Trigger: TCCAAGACCTGTTGGACTTCAAGGACAAGGTGGACC...GTAAACTGTAAAAAGTTTATGGAGACTTAAAGTCTTGATGTTGTGAAGCAGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTGGGCCTGAGTCACTCTaGTTCTGCATATGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFGPESL*FCICCL
Trigger: CAAGCAGCATATGCAGAATCAGAGTGACTCAGGCCC...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp GGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTATTGCAATCAAAGTAGTTTGCCACTaGAGTTTTCGACCACTGTGC +
Preference number: 4 (lower is better)
Translates to: GSSLRMTVKTKPNFIIAIKVVCH*SFRPLC
Trigger: GCACAGTGGTCGAAAACTTCAGTGGCAAACTACTTT...GATTGCAATAATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp CAGCATCTAGGGTCTTCTTCATTGTGCACTCATGATCACACACGAGAACAAACCAAACTTGCAGCTTTTTaGCACAAGAACAAGACCTTT +
Preference number: 4 (lower is better)
Translates to: QHLGSSSLCTHDHTREQTKLAAF*HKNKTF
Trigger: AAAGGTCTTGTTCTTGTGTCAAAAAGCTGCAAGTTT...GGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAGACCCTAGATGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp CAGAGAACAAGGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTTCATTGTGCACTCATaGTCACACACGAGAACAAAC +
Preference number: 4 (lower is better)
Translates to: QRTRIVPAHDCKNQTKLYFIVHS*SHTRTN
Trigger: GTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAA...ATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCCTTGTTCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp GGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTATTGCAATCTTTCACTCTAAATGCTaGTCATCTGAGCGAGCTGTC +
Preference number: 4 (lower is better)
Translates to: GSSLRMTVKTKPNFIIAIFHSKC*SSERAV
Trigger: GACAGCTCGCTCAGATGATCAGCATTTAGAGTGAAA...GATTGCAATAATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp CCTCTGCTTCACAACATCAAGACTTTAAGTCTCCATAAACTTTTTACAGTTTACGGTGGCCCAAACTTCTaGGCATGGGTAGTTGTTGCA +
Preference number: 4 (lower is better)
Translates to: PLLHNIKTLSLHKLFTVYGGPNF*AWVVVA
Trigger: TGCAACAACTACCCATGCTCAGAAGTTTGGGCCACC...GTAAACTGTAAAAAGTTTATGGAGACTTAAAGTCTTGATGTTGTGAAGCAGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR TCA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTGGTGGCCCAAACTTCTaGGCATGGGTAGTTGTTGCA +
Preference number: 4 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFGGPNF*AWVVVA
Trigger: TGCAACAACTACCCATGCTCAGAAGTTTGGGCCACC...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR GCA 90 bp CAGAGAACAAGGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTGGTCGAGCCCTTTCTaGAGAATTGCTGTTAAATGT +
Preference number: 4 (lower is better)
Translates to: QRTRIVPAHDCKNQTKLYWSSPF*RIAVKC
Trigger: ACATTTAACAGCAATTCTGCAGAAAGGGCTCGACCA...ATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCCTTGTTCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp TCTTCATTGTGCACTCATGATCACACACGAGAACAAACCAAACTTGCAGCTTTTGGGTCTTCTTCATTGTaGACTCATGATCACACACGA +
Preference number: 4 (lower is better)
Translates to: SSLCTHDHTREQTKLAAFGSSSL*THDHTR
Trigger: TCGTGTGTGATCATGAGTGCACAATGAAGAAGACCC...AAAAGCTGCAAGTTTGGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp CAGCATCTAGGGTCTTCTTCATTGTGCACTCATGATCACACACGAGAACAAACCCCACAAAATAACCTCTaGTTCACAACATCAAGACTT +
Preference number: 4 (lower is better)
Translates to: QHLGSSSLCTHDHTREQTPQNNL*FTTSRL
Trigger: AAGTCTTGATGTTGTGAAGCAGAGGTTATTTTGTGG...GGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAGACCCTAGATGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp CAGAGAACAAGGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTTGCTTGTAGAGCATTaGGGAGACTTTGTGAGAACA +
Preference number: 4 (lower is better)
Translates to: QRTRIVPAHDCKNQTKLYLLVEH*GDFVRT
Trigger: TGTTCTCACAAAGTCTCCCCAATGCTCTACAAGCAA...ATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCCTTGTTCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp TCTTCATTGTGCACTCATGATCACACACGAGAACAAACCAAACTTGCAGCTTTTTCCTGCATTAACCTTTaGCCTTCGGCAGCATATAAG +
Preference number: 4 (lower is better)
Translates to: SSLCTHDHTREQTKLAAFSCINL*PSAAYK
Trigger: CTTATATGCTGCCGAAGGCCAAAGGTTAATGCAGGA...AAAAGCTGCAAGTTTGGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp GGGAGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTCCTGCATTAACCTTTaGCCTTCGGCAGCATATAAG +
Preference number: 4 (lower is better)
Translates to: GSSLRNLTYEKSAIKVYNSCINL*PSAAYK
Trigger: CTTATATGCTGCCGAAGGCCAAAGGTTAATGCAGGA...GTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp CAGCATCTAGGGTCTTCTTCATTGTGCACTCATGATCACACACGAGAACAAACCGAGTTCCTGTGTATTTaGCTTATTTGTGGACTTTCT +
Preference number: 4 (lower is better)
Translates to: QHLGSSSLCTHDHTREQTEFLCI*LICGLS
Trigger: AGAAAGTCCACAAATAAGCCAAATACACAGGAACTC...GGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAGACCCTAGATGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR TCA 90 bp GGGAGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACATTGGGGAGACTTTGTaGGAACAGAGATTTTCCACA +
Preference number: 4 (lower is better)
Translates to: GSSLRNLTYEKSAIKVYNIGETL*EQRFST
Trigger: TGTGGAAAATCTCTGTTCTCACAAAGTCTCCCCAAT...GTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp GGGAGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTGTCTTTCTCAGGATTaGTTACGATCGCTGTTCCAA +
Preference number: 4 (lower is better)
Translates to: GSSLRNLTYEKSAIKVYNCLSQD*LRSLFQ
Trigger: TTGGAACAGCGATCGTAATCAATCCTGAGAAAGACA...GTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp CAGAGAACAAGGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATATATGCTGCTTGAAATaGACCATGATGTCCTTCGAA +
Preference number: 4 (lower is better)
Translates to: QRTRIVPAHDCKNQTKLYICCLK*TMMSFE
Trigger: TTCGAAGGACATCATGGTTCATTTCAAGCAGCATAT...ATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCCTTGTTCTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp CCTCTGCTTCACAACATCAAGACTTTAAGTCTCCATAAACTTTTTACAGTTTACGAGGTCTATAGGGCCTaGGTCACTCTGATTCTGCAT +
Preference number: 4 (lower is better)
Translates to: PLLHNIKTLSLHKLFTVYEVYRA*VTLILH
Trigger: ATGCAGAATCAGAGTGACTCAGGCCCTATAGACCTC...GTAAACTGTAAAAAGTTTATGGAGACTTAAAGTCTTGATGTTGTGAAGCAGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp TCTTCATTGTGCACTCATGATCACACACGAGAACAAACCAAACTTGCAGCTTTTTTCATTGTGCACTCATaGTCACACACGAGAACAAAC +
Preference number: 4 (lower is better)
Translates to: SSLCTHDHTREQTKLAAFFIVHS*SHTRTN
Trigger: GTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAA...AAAAGCTGCAAGTTTGGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp GGGAGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACGCTCACTTAGAAACCTaGCTTACGAAAAATCAGCCA +
Preference number: 4 (lower is better)
Translates to: GSSLRNLTYEKSAIKVYNAHLET*LTKNQP
Trigger: TGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGC...GTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTTCTGCAGCACATAGGTaGGGTCCAAGAACAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFSAAHR*GPRTGR
Trigger: TCTTCCTGTTCTTGGACCGCACCTATGTGCTGCAGA...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp CAGAGAACAAGGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATAACTTTGAATCCACATaGTTTGCGATCAGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: QRTRIVPAHDCKNQTKLYNFEST*FAISSA
Trigger: TGCAGAACTGATCGCAAAGCATGTGGATTCAAAGTT...ATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCCTTGTTCTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTAGGATCTCCCTATGGTaGTCAGGATGGTCTGGAACT +
Preference number: 4 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFRISLW*SGWSGT
Trigger: AGTTCCAGACCATCCTGAGCACCATAGGGAGATCCT...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR GCA 90 bp TTTCTTCAGTCACAGATTTTCATTTGCTCCTTAGATGACCTGGGTATGCAACCAAGCATGGGTAGTTGTTaGAAAGTTCCAGTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: FLQSQIFICSLDDLGMQPSMGSC*KVPVPD
Trigger: ATCAGGAACTGGAACTTTGCAACAACTACCCATGCT...TGGTTGCATACCCAGGTCATCTAAGGAGCAAATGAAAATCTGTGACTGAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CCA 90 bp GGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTATTGCAATCTTGCTTGTAGAGCATTaGGGAGACTTTGTGAGAACA +
Preference number: 4 (lower is better)
Translates to: GSSLRMTVKTKPNFIIAILLVEH*GDFVRT
Trigger: TGTTCTCACAAAGTCTCCCCAATGCTCTACAAGCAA...GATTGCAATAATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp AAACAGGGACTGCCAGACTCAATCTTAGAATGGAAACACAAACACACTAGCCCCGTAGGATTCCATCAATaGTTTTACTCTGAACCATTT +
Preference number: 4 (lower is better)
Translates to: KQGLPDSILEWKHKHTSPVGFHQ*FYSEPF
Trigger: AAATGGTTCAGAGTAAAACCATTGATGGAATCCTAC...GGGGCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTCTGGCAGTCCCTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp TCTTCATTGTGCACTCATGATCACACACGAGAACAAACCAAACTTGCAGCTTTTAAGTCCAACAGGTCTTaGACCATGTCTTTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: SSLCTHDHTREQTKLAAFKSNRS*TMSLSF
Trigger: GAAAGACAAAGACATGGTCCAAGACCTGTTGGACTT...AAAAGCTGCAAGTTTGGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp GGGAGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACAAGTCCAACAGGTCTTaGACCATGTCTTTGTCTTTC +
Preference number: 4 (lower is better)
Translates to: GSSLRNLTYEKSAIKVYNKSNRS*TMSLSF
Trigger: GAAAGACAAAGACATGGTCCAAGACCTGTTGGACTT...GTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp AAACAGGGACTGCCAGACTCAATCTTAGAATGGAAACACAAACACACTAGCCCCATCTCCAGGCTTTACTaGAAATTTCAGCTGATTATA +
Preference number: 4 (lower is better)
Translates to: KQGLPDSILEWKHKHTSPISRLY*KFQLII
Trigger: TATAATCAGCTGAAATTTCCAGTAAAGCCTGGAGAT...GGGGCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTCTGGCAGTCCCTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp CAGCATCTAGGGTCTTCTTCATTGTGCACTCATGATCACACACGAGAACAAACCATCTCCAGGCTTTACTaGAAATTTCAGCTGATTATA +
Preference number: 4 (lower is better)
Translates to: QHLGSSSLCTHDHTREQTISRLY*KFQLII
Trigger: TATAATCAGCTGAAATTTCCAGTAAAGCCTGGAGAT...GGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAGACCCTAGATGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp CCTCTGCTTCACAACATCAAGACTTTAAGTCTCCATAAACTTTTTACAGTTTACGTGCTCAGGATGGTCTaGAACTCAGGCTCAAACGAT +
Preference number: 4 (lower is better)
Translates to: PLLHNIKTLSLHKLFTVYVLRMV*NSGSND
Trigger: ATCGTTTGAGCCTGAGTTCCAGACCATCCTGAGCAC...GTAAACTGTAAAAAGTTTATGGAGACTTAAAGTCTTGATGTTGTGAAGCAGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CCA 90 bp CCTCTGCTTCACAACATCAAGACTTTAAGTCTCCATAAACTTTTTACAGTTTACCTATGGTGCTCAGGATaGTCTGGAACTCAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: PLLHNIKTLSLHKLFTVYLWCSG*SGTQAQ
Trigger: TTGAGCCTGAGTTCCAGACCATCCTGAGCACCATAG...GTAAACTGTAAAAAGTTTATGGAGACTTAAAGTCTTGATGTTGTGAAGCAGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR TCA 90 bp CCTCTGCTTCACAACATCAAGACTTTAAGTCTCCATAAACTTTTTACAGTTTACCTGTTCCAAAAGTCTTaGTGTACTCGCTCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: PLLHNIKTLSLHKLFTVYLFQKS*CTRSSA
Trigger: AGCACTGGAGCGAGTACATCAAGACTTTTGGAACAG...GTAAACTGTAAAAAGTTTATGGAGACTTAAAGTCTTGATGTTGTGAAGCAGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTACTCCTTCATCAGGTTaGCGAACCGCTCATTCTTCT +
Preference number: 4 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFTPSSG*RTAHSS
Trigger: AGAAGAATGAGCGGTTCGTCAACCTGATGAAGGAGT...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp TCTTCATTGTGCACTCATGATCACACACGAGAACAAACCAAACTTGCAGCTTTTATATGCTGCTTGAAATaGACCATGATGTCCTTCGAA +
Preference number: 4 (lower is better)
Translates to: SSLCTHDHTREQTKLAAFICCLK*TMMSFE
Trigger: TTCGAAGGACATCATGGTTCATTTCAAGCAGCATAT...AAAAGCTGCAAGTTTGGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp CCTCTGCTTCACAACATCAAGACTTTAAGTCTCCATAAACTTTTTACAGTTTACTCCATTCGCCAGCTTTaGACCCTGGCTCTTTCTAAT +
Preference number: 4 (lower is better)
Translates to: PLLHNIKTLSLHKLFTVYSIRQL*TLALSN
Trigger: ATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGA...GTAAACTGTAAAAAGTTTATGGAGACTTAAAGTCTTGATGTTGTGAAGCAGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTGCCACTGTGCTCAAATaGAACAAAGGCACAGCACAA +
Preference number: 4 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFATVLK*NKGTAQ
Trigger: TTGTGCTGTGCCTTTGTTTCATTTGAGCACAGTGGC...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR TCA 90 bp TCTTCATTGTGCACTCATGATCACACACGAGAACAAACCAAACTTGCAGCTTTTGTCTGGTTAACTTGGTaGATTCTTTCTTCAGTCACA +
Preference number: 4 (lower is better)
Translates to: SSLCTHDHTREQTKLAAFVWLTW*ILSSVT
Trigger: TGTGACTGAAGAAAGAATTCACCAAGTTAACCAGAC...AAAAGCTGCAAGTTTGGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR GCA 90 bp TCTTCATTGTGCACTCATGATCACACACGAGAACAAACCAAACTTGCAGCTTTTAACTTTGAATCCACATaGTTTGCGATCAGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: SSLCTHDHTREQTKLAAFNFEST*FAISSA
Trigger: TGCAGAACTGATCGCAAAGCATGTGGATTCAAAGTT...AAAAGCTGCAAGTTTGGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp TTTCTTCAGTCACAGATTTTCATTTGCTCCTTAGATGACCTGGGTATGCAACCAAACTTTGAATCCACATaGTTTGCGATCAGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: FLQSQIFICSLDDLGMQPNFEST*FAISSA
Trigger: TGCAGAACTGATCGCAAAGCATGTGGATTCAAAGTT...TGGTTGCATACCCAGGTCATCTAAGGAGCAAATGAAAATCTGTGACTGAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CCA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTTTAAGTGCACTTCCATaGGCGTGTATGTTGGCCAGT +
Preference number: 4 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFLSALP*ACMLAS
Trigger: ACTGGCCAACATACACGCCCATGGAAGTGCACTTAA...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp CCTCTGCTTCACAACATCAAGACTTTAAGTCTCCATAAACTTTTTACAGTTTACTGGAAGAGGGACACCTaGAATTCCTTCTTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: PLLHNIKTLSLHKLFTVYWKRDT*NSFFPS
Trigger: AGAAGGGAAGAAGGAATTCCAGGTGTCCCTCTTCCA...GTAAACTGTAAAAAGTTTATGGAGACTTAAAGTCTTGATGTTGTGAAGCAGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp CCTCTGCTTCACAACATCAAGACTTTAAGTCTCCATAAACTTTTTACAGTTTACTCCAATGTCCACAGCTaGATCAATCAGAGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: PLLHNIKTLSLHKLFTVYSNVHS*INQSPR
Trigger: TCTGGGACTCTGATTGATCCAGCTGTGGACATTGGA...GTAAACTGTAAAAAGTTTATGGAGACTTAAAGTCTTGATGTTGTGAAGCAGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTAAAGTAGTTTGCCACTaGAGTTTTCGACCACTGTGC +
Preference number: 4 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFKVVCH*SFRPLC
Trigger: GCACAGTGGTCGAAAACTTCAGTGGCAAACTACTTT...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp GGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTATTGCAATCAAACTTGCAGCTTTTTaGCACAAGAACAAGACCTTT +
Preference number: 4 (lower is better)
Translates to: GSSLRMTVKTKPNFIIAIKLAAF*HKNKTF
Trigger: AAAGGTCTTGTTCTTGTGTCAAAAAGCTGCAAGTTT...GATTGCAATAATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp GGGAGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACAAACTTGCAGCTTTTTaGCACAAGAACAAGACCTTT +
Preference number: 4 (lower is better)
Translates to: GSSLRNLTYEKSAIKVYNKLAAF*HKNKTF
Trigger: AAAGGTCTTGTTCTTGTGTCAAAAAGCTGCAAGTTT...GTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCTCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp TCTTCATTGTGCACTCATGATCACACACGAGAACAAACCAAACTTGCAGCTTTTGCTGCTAAAGAGTTATaGAGAATGTGTCATTTGCAT +
Preference number: 4 (lower is better)
Translates to: SSLCTHDHTREQTKLAAFAAKEL*RMCHLH
Trigger: ATGCAAATGACACATTCTTCATAACTCTTTAGCAGC...AAAAGCTGCAAGTTTGGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR GCA 90 bp CCTCTGCTTCACAACATCAAGACTTTAAGTCTCCATAAACTTTTTACAGTTTACATTTCTGGGGTTAAGTaGACTTCCATGGGCGTGTAT +
Preference number: 4 (lower is better)
Translates to: PLLHNIKTLSLHKLFTVYISGVK*TSMGVY
Trigger: ATACACGCCCATGGAAGTGCACTTAACCCCAGAAAT...GTAAACTGTAAAAAGTTTATGGAGACTTAAAGTCTTGATGTTGTGAAGCAGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp CCTCTGCTTCACAACATCAAGACTTTAAGTCTCCATAAACTTTTTACAGTTTACGGGTCTTCTTCATTGTaGACTCATGATCACACACGA +
Preference number: 4 (lower is better)
Translates to: PLLHNIKTLSLHKLFTVYGSSSL*THDHTR
Trigger: TCGTGTGTGATCATGAGTGCACAATGAAGAAGACCC...GTAAACTGTAAAAAGTTTATGGAGACTTAAAGTCTTGATGTTGTGAAGCAGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp CAGAGAACAAGGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATGTAGGATTCCATCAATaGTTTTACTCTGAACCATTT +
Preference number: 4 (lower is better)
Translates to: QRTRIVPAHDCKNQTKLYVGFHQ*FYSEPF
Trigger: AAATGGTTCAGAGTAAAACCATTGATGGAATCCTAC...ATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCCTTGTTCTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTTCCTGCATTAACCTTTaGCCTTCGGCAGCATATAAG +
Preference number: 4 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFSCINL*PSAAYK
Trigger: CTTATATGCTGCCGAAGGCCAAAGGTTAATGCAGGA...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTTTCATTGTGCACTCATaGTCACACACGAGAACAAAC +
Preference number: 4 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFFIVHS*SHTRTN
Trigger: GTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAA...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTGCTCACTTAGAAACCTaGCTTACGAAAAATCAGCCA +
Preference number: 4 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFAHLET*LTKNQP
Trigger: TGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGC...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR TCA 90 bp CCTCTGCTTCACAACATCAAGACTTTAAGTCTCCATAAACTTTTTACAGTTTACGCTCACTTAGAAACCTaGCTTACGAAAAATCAGCCA +
Preference number: 4 (lower is better)
Translates to: PLLHNIKTLSLHKLFTVYAHLET*LTKNQP
Trigger: TGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGC...GTAAACTGTAAAAAGTTTATGGAGACTTAAAGTCTTGATGTTGTGAAGCAGAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp GGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTATTGCAATCAGAACAAACCAAACTTaGAGCTTTTTGACACAAGAA +
Preference number: 4 (lower is better)
Translates to: GSSLRMTVKTKPNFIIAIRTNQT*SFLTQE
Trigger: TTCTTGTGTCAAAAAGCTGCAAGTTTGGTTTGTTCT...GATTGCAATAATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTTTGCTTGTAGAGCATTaGGGAGACTTTGTGAGAACA +
Preference number: 4 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFLLVEH*GDFVRT
Trigger: TGTTCTCACAAAGTCTCCCCAATGCTCTACAAGCAA...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp GGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTATTGCAATCGTAGGATTCCATCAATaGTTTTACTCTGAACCATTT +
Preference number: 4 (lower is better)
Translates to: GSSLRMTVKTKPNFIIAIVGFHQ*FYSEPF
Trigger: AAATGGTTCAGAGTAAAACCATTGATGGAATCCTAC...GATTGCAATAATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp GGGAGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACAAGCGTTTACTTACATaGTTAAGATATTCTGGAACC +
Preference number: 4 (lower is better)
Translates to: GSSLRNLTYEKSAIKVYNKRLLT*LRYSGT
Trigger: GGTTCCAGAATATCTTAACCATGTAAGTAAACGCTT...GTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCTCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp TCTTCATTGTGCACTCATGATCACACACGAGAACAAACCAAACTTGCAGCTTTTAAGCGTTTACTTACATaGTTAAGATATTCTGGAACC +
Preference number: 4 (lower is better)
Translates to: SSLCTHDHTREQTKLAAFKRLLT*LRYSGT
Trigger: GGTTCCAGAATATCTTAACCATGTAAGTAAACGCTT...AAAAGCTGCAAGTTTGGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp GGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTATTGCAATCATCTCCAGGCTTTACTaGAAATTTCAGCTGATTATA +
Preference number: 4 (lower is better)
Translates to: GSSLRMTVKTKPNFIIAIISRLY*KFQLII
Trigger: TATAATCAGCTGAAATTTCCAGTAAAGCCTGGAGAT...GATTGCAATAATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp TCTTCATTGTGCACTCATGATCACACACGAGAACAAACCAAACTTGCAGCTTTTATCTCCAGGCTTTACTaGAAATTTCAGCTGATTATA +
Preference number: 4 (lower is better)
Translates to: SSLCTHDHTREQTKLAAFISRLY*KFQLII
Trigger: TATAATCAGCTGAAATTTCCAGTAAAGCCTGGAGAT...AAAAGCTGCAAGTTTGGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp TCTTCATTGTGCACTCATGATCACACACGAGAACAAACCAAACTTGCAGCTTTTTATTTGGCTTATTTGTaGACTTTCTTGTTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: SSLCTHDHTREQTKLAAFYLAYL*TFLFQE
Trigger: TTCCTGGAACAAGAAAGTCCACAAATAAGCCAAATA...AAAAGCTGCAAGTTTGGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR TCA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTATATGCTGCTTGAAATaGACCATGATGTCCTTCGAA +
Preference number: 4 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFICCLK*TMMSFE
Trigger: TTCGAAGGACATCATGGTTCATTTCAAGCAGCATAT...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTTCACAGATTTTCATTTaGTCCTTAGATGACCTGGGT +
Preference number: 4 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFSQIFI*SLDDLG
Trigger: ACCCAGGTCATCTAAGGAGCAAATGAAAATCTGTGA...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CCA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTAAGACATCTTTACCGTaGATAAACCTGAACAGGATC +
Preference number: 4 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFKTSLP*INLNRI
Trigger: GATCCTGTTCAGGTTTATCCACGGTAAAGATGTCTT...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTCCACAAAATAACCTCTaGTTCACAACATCAAGACTT +
Preference number: 4 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFPQNNL*FTTSRL
Trigger: AAGTCTTGATGTTGTGAAGCAGAGGTTATTTTGTGG...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR GCA 90 bp CCTCTGCTTCACAACATCAAGACTTTAAGTCTCCATAAACTTTTTACAGTTTACAAAGGGCCAGCATCATaGTGTTTCAATTACAATGTT +
Preference number: 4 (lower is better)
Translates to: PLLHNIKTLSLHKLFTVYKGPAS*CFNYNV
Trigger: AACATTGTAATTGAAACAGCATGATGCTGGCCCTTT...GTAAACTGTAAAAAGTTTATGGAGACTTAAAGTCTTGATGTTGTGAAGCAGAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR GCA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTAAAGGGCCAGCATCATaGTGTTTCAATTACAATGTT +
Preference number: 4 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFKGPAS*CFNYNV
Trigger: AACATTGTAATTGAAACAGCATGATGCTGGCCCTTT...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CCA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTGACTCAATCTTAGAATaGAAACACAAACACACTAGC +
Preference number: 4 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFDSILE*KHKHTS
Trigger: GCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTC...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp CCTCTGCTTCACAACATCAAGACTTTAAGTCTCCATAAACTTTTTACAGTTTACAAGCGTTTACTTACATaGTTAAGATATTCTGGAACC +
Preference number: 4 (lower is better)
Translates to: PLLHNIKTLSLHKLFTVYKRLLT*LRYSGT
Trigger: GGTTCCAGAATATCTTAACCATGTAAGTAAACGCTT...GTAAACTGTAAAAAGTTTATGGAGACTTAAAGTCTTGATGTTGTGAAGCAGAGG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CCA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTAAGCGTTTACTTACATaGTTAAGATATTCTGGAACC +
Preference number: 4 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFKRLLT*LRYSGT
Trigger: GGTTCCAGAATATCTTAACCATGTAAGTAAACGCTT...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS GCA 90 bp GAACAGCGGCGGCCGGGACTCGGGAAGGCGGCCCGAGTTCTCCCCTaGAGGGCCGCCGTGGGGGCCGGGCGGTGTCCGTGGATCGCGGAG +
Preference number: 5 (lower is better)
Translates to: EQRRPGLGKAARVLP*RAAVGAGRCPWIAE
Trigger: CTCCGCGATCCACGGACACCGCCCGGCCCCCACGGCGGCCCTGCAGGGGAGAACTCGGGCCGCCTTCCCGAGTCCCGGCCGCCGCTGTTC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375441.7
CDS CCA 90 bp CGGGACTCGGGAAGGCGGCCCGAGTTCTCCCCTGCAGGGCCGCCGTaGGGGCCGGGCGGTGTCCGTGGATCGCGGAGTCGTCGCGGTGTA +
Preference number: 5 (lower is better)
Translates to: RDSGRRPEFSPAGPP*GPGGVRGSRSRRGV
Trigger: TACACCGCGACGACTCCGCGATCCACGGACACCGCCCGGCCCCCACGGCGGCCCTGCAGGGGAGAACTCGGGCCGCCTTCCCGAGTCCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375441.7
CDS GCA 90 bp ACTTGCTGGCACGTGTGGCCGCGCTCCCAGGCGGTCCGAAGGGCCTaGGGGCCACGCCGAGGGCCCGCTGTGGGCGGTGCTGTGTCGGAT +
Preference number: 5 (lower is better)
Translates to: TCWHVWPRSQAVRRA*GPRRGPAVGGAVSD
Trigger: ATCCGACACAGCACCGCCCACAGCGGGCCCTCGGCGTGGCCCGCAGGCCCTTCGGACCGCCTGGGAGCGCGGCCACACGTGCCAGCAAGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375441.7
CDS GCA 90 bp CCGCCACGTGTCCTGCGTGTAGTTGTCGGGCAGCCGAGGTCTGTCTaGAGGGCGGAGGGAGAGCGGGCGGCTCAGGGCGCGCCGCGAAGC +
Preference number: 5 (lower is better)
Translates to: PPRVLRVVVGQPRSV*RAEGERAAQGAPRS
Trigger: GCTTCGCGGCGCGCCCTGAGCCGCCCGCTCTCCCTCCGCCCTGCAGACAGACCTCGGCTGCCCGACAACTACACGCAGGACACGTGGCGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463426.5
ENST00000498562.2
CDS CCA 90 bp CCCAGGCGGTCCGAAGGGCCTGCGGGCCACGCCGAGGGCCCGCTGTaGGCGGTGCTGTGTCGGATGGACGCTGTTTCCCAGCAGGATGCG +
Preference number: 5 (lower is better)
Translates to: PRRSEGPAGHAEGPL*AVLCRMDAVSQQDA
Trigger: CGCATCCTGCTGGGAAACAGCGTCCATCCGACACAGCACCGCCCACAGCGGGCCCTCGGCGTGGCCCGCAGGCCCTTCGGACCGCCTGGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375441.7
CDS CCA 90 bp TCTGTCTGCAGCAGGTGGGTCCTAGCCGGGGAGCGCGCGGCGGCGTaGTTGGCCCTCGGCGTGTTCCGTGTGTCCCCTCCTGCCTTGGAC +
Preference number: 5 (lower is better)
Translates to: SVCSRWVLAGERAAA*LALGVFRVSPPALD
Trigger: GTCCAAGGCAGGAGGGGACACACGGAACACGCCGAGGGCCAACCACGCCGCCGCGCGCTCCCCGGCTAGGACCCACCTGCTGCAGACAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375441.7
CDS GCA 90 bp GGTCCGAAGGGCCTGCGGGCCACGCCGAGGGCCCGCTGTGGGCGGTaGTGTGTCGGATGGACGCTGTTTCCCAGCAGGATGCGGGATGAA +
Preference number: 5 (lower is better)
Translates to: GPKGLRATPRARCGR*CVGWTLFPSRMRDE
Trigger: TTCATCCCGCATCCTGCTGGGAAACAGCGTCCATCCGACACAGCACCGCCCACAGCGGGCCCTCGGCGTGGCCCGCAGGCCCTTCGGACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375441.7
CDS GCA 90 bp CGCGGCGGCGTGGTTGGCCCTCGGCGTGTTCCGTGTGTCCCCTCCTaGCTTGGACCCTCAGGCCTTTTCCTTTCCCGCCTCGCCACCCTT +
Preference number: 5 (lower is better)
Translates to: RGGVVGPRRVPCVPS*LGPSGLFLSRLATL
Trigger: AAGGGTGGCGAGGCGGGAAAGGAAAAGGCCTGAGGGTCCAAGGCAGGAGGGGACACACGGAACACGCCGAGGGCCAACCACGCCGCCGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375441.7
CDS-3UTR CAA 90 bp CCAGGCTCAACCTCCAGTCGTCAGAGAGAAACCAAGACCCTCTGTCTTCACCCTGCCAGGGCCGCGGGCTaGGTGAGGCCGTTGGTGCGG +
Preference number: 5 (lower is better)
Translates to: PGSTSSRQRETKTLCLHPARAAG*VRPLVR
Trigger: CCGCACCAACGGCCTCACCAAGCCCGCGGCCCTGGC...AGGGTGAAGACAGAGGGTCTTGGTTTCTCTCTGACGACTGGAGGTTGAGCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488558.2
CDS-3UTR CAA 90 bp ACTCCTTGCTGCTGGCTAGACACCTGGTGTTTCAAGGCTAAGACCCACCTGGACGGCTTGGTGAGGCCGTaGGTGCGGCCCACGAGCGCC +
Preference number: 5 (lower is better)
Translates to: TPCCWLDTWCFKAKTHLDGLVRP*VRPTSA
Trigger: GGCGCTCGTGGGCCGCACCAACGGCCTCACCAAGCC...GTCCAGGTGGGTCTTAGCCTTGAAACACCAGGTGTCTAGCCAGCAGCAAGGAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488558.2
CDS-3UTR CAA 90 bp CATCTGCAGGTTGAAGTCTTGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCCGCCAGGGCCGCGGGCTaGGTGAGGCCGTTGGTGCGG +
Preference number: 5 (lower is better)
Translates to: HLQVEVLSLVKDDPGATSARAAG*VRPLVR
Trigger: CCGCACCAACGGCCTCACCAAGCCCGCGGCCCTGGC...GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375440.9
CDS-3UTR CAA 90 bp TTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCATGAAGGGCCCTTGCGCGCGGCGGCGTGGTaGGCCCTCGGCGTGTTCCGT +
Preference number: 5 (lower is better)
Translates to: FASFEPWLFLMFTHEGPLRAAAW*ALGVFR
Trigger: ACGGAACACGCCGAGGGCCAACCACGCCGCCGCGCG...CAAGGGCCCTTCATGGGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375441.7
CDS-3UTR CAA 90 bp CGCAGCAGGGCGGACACCATGGCCTTGGCACCTCAGGGAGCTCACTTAGAAACCAACATGCCTTCCAGCTaGCTGGTGAAGGCTGCACCG +
Preference number: 5 (lower is better)
Translates to: RSRADTMALAPQGAHLETNMPSS*LVKAAP
Trigger: CGGTGCAGCCTTCACCAGCAAGCTGGAAGGCATGTT...GGTTTCTAAGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp AGGGTGCGTCATCCATTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCGGCTTGGTGAGGCCGTaGGTGCGGCCCACGAGCGCC +
Preference number: 5 (lower is better)
Translates to: RVRHPFASFEPWLFLMFTGLVRP*VRPTSA
Trigger: GGCGCTCGTGGGCCGCACCAACGGCCTCACCAAGCC...GGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375440.9
CDS TCA 90 bp AACAGAGATTTTCCACAGCCTGGTAGAGCTCCTCGAGGTTGTACCTaGTGGAGGTGCTGCTCTGCACGGCCCGCACCGCCTCGTGCAGCT +
Preference number: 5 (lower is better)
Translates to: NRDFPQPGRAPRGCT*WRCCSARPAPPRAA
Trigger: AGCTGCACGAGGCGGTGCGGGCCGTGCAGAGCAGCACCTCCATCAGGTACAACCTCGAGGAGCTCTACCAGGCTGTGGAAAATCTCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000463426.5
ENST00000474116.5
ENST00000488558.2
ENST00000498562.2
CDS-3UTR CAA 90 bp GTGGCCGCGAACGCTGCTGAGGAAAGGCCCCAGAACCCCTGGTGTATACAGTCCACAGGCCTGACGCAGTaGCTTGTAGAGCATTGGGGA +
Preference number: 5 (lower is better)
Translates to: VAANAAEERPQNPWCIQSTGLTQ*LVEHWG
Trigger: TCCCCAATGCTCTACAAGCAACTGCGTCAGGCCTGT...GGACTGTATACACCAGGGGTTCTGGGGCCTTTCCTCAGCAGCGTTCGCGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488558.2
CDS-3UTR CAA 90 bp AGGCTGAGCAAGCCATTCCACAGGGGACGCACAGCCTCAGGGCTGCGACCCCACCTGTCTCGGAAGTTCTaGATGACCAGCTTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: RLSKPFHRGRTASGLRPHLSRKF*MTSFLE
Trigger: CTCCAAGAAGCTGGTCATCAAGAACTTCCGAGACAG...GTGGGGTCGCAGCCCTGAGGCTGTGCGTCCCCTGTGGAATGGCTTGCTCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488558.2
CDS-3UTR CAA 90 bp CGCAGCAGGGCGGACACCATGGCCTTGGCACCTCAGGGAGCTCACTTAGAAACCAAGCCATCTCCCTCGTaGAACATGAGGAGCACCAGT +
Preference number: 5 (lower is better)
Translates to: RSRADTMALAPQGAHLETKPSPS*NMRSTS
Trigger: ACTGGTGCTCCTCATGTTCAACGAGGGAGATGGCTT...GGTTTCTAAGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp AATCAGAGTCCCAGAAATGGCACAGGTGTGCTTCCTGCTCTGAGGGTACATTCTGGTCGCTGCCCTCACTaGCTGGCACGTGTGGCCGCG +
Preference number: 5 (lower is better)
Translates to: NQSPRNGTGVLPALRVHSGRCPH*LARVAA
Trigger: CGCGGCCACACGTGCCAGCAAGTGAGGGCAGCGACC...AGAATGTACCCTCAGAGCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375441.7
CDS-3UTR CAA 90 bp GGACACAGCTTTTGTCCAAAGTCGGCTTGCAGGAGGCGGCAGGATTCAGCGCCATTGTCCAAAGTCGGCTaGCAGGAGGCGGCAGGATTC +
Preference number: 5 (lower is better)
Translates to: GHSFCPKSACRRRQDSAPLSKVG*QEAAGF
Trigger: GAATCCTGCCGCCTCCTGCAAGCCGACTTTGGACAA...TGGCGCTGAATCCTGCCGCCTCCTGCAAGCCGACTTTGGACAAAAGCTGTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488558.2
CDS-3UTR CAA 90 bp CGCAGCAGGGCGGACACCATGGCCTTGGCACCTCAGGGAGCTCACTTAGAAACCGCTGTTCCAAAAGTCTaGATGTACTCGCTCCAGTGC +
Preference number: 5 (lower is better)
Translates to: RSRADTMALAPQGAHLETAVPKV*MYSLQC
Trigger: GCACTGGAGCGAGTACATCAAGACTTTTGGAACAGC...GGTTTCTAAGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp CGCAGCAGGGCGGACACCATGGCCTTGGCACCTCAGGGAGCTCACTTAGAAACCGCACCGCACTCATGCTaGAGCTTTGACAACATAGAC +
Preference number: 5 (lower is better)
Translates to: RSRADTMALAPQGAHLETAPHSC*SFDNID
Trigger: GTCTATGTTGTCAAAGCTCAAGCATGAGTGCGGTGC...GGTTTCTAAGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGCTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS CCA 90 bp CCTGTCCGAGCTTCCTGCTCCACTCCTTGCTGCTGGCTAGACACCTaGTGTTTCAAGGCTAAGACCCACCTGGACTCCTACGTTCACGTT +
Preference number: 5 (lower is better)
Translates to: PVRASCSTPCCWLDT*CFKAKTHLDSYVHV
Trigger: AACGTGAACGTAGGAGTCCAGGTGGGTCTTAGCCTTGAAACACCAGGTGTCTAGCCAGCAGCAAGGAGTGGAGCAGGAAGCTCGGACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463426.5
ENST00000488558.2
CDS-3UTR CAA 90 bp TTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCACGCCGAGTTCCTGTGTATAACATGCCTTCCAGCTaGCTGGTGAAGGCTGCACCG +
Preference number: 5 (lower is better)
Translates to: FQFLITHGPFVPRRVPVYNMPSS*LVKAAP
Trigger: CGGTGCAGCCTTCACCAGCAAGCTGGAAGGCATGTT...ATACACAGGAACTCGGCGTGGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CAA 90 bp CGCAGCAGGGCGGACACCATGGCCTTGGCACCTCAGGGAGCTCACTTAGAAACCCTGCAGGTTGAAGTCTaGAGCCTTGTGAAAGATGAC +
Preference number: 5 (lower is better)
Translates to: RSRADTMALAPQGAHLETLQVEV*SLVKDD
Trigger: GTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAG...GGTTTCTAAGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp ATGGGTAGTTGTTGCAAAGTTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCTCACACACGGCCCCTTaGTGCCACGCCGAGTTCCTG +
Preference number: 5 (lower is better)
Translates to: MGSCCKVPVPDHTRPLCASHTAP*CHAEFL
Trigger: CAGGAACTCGGCGTGGCACAAAGGGGCCGTGTGTGA...GGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAACTTTGCAACAACTACCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CAA 90 bp TTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCACGCCGAGTTCCTGTGTATACAGGCCTGACGCAGTaGCTTGTAGAGCATTGGGGA +
Preference number: 5 (lower is better)
Translates to: FQFLITHGPFVPRRVPVYTGLTQ*LVEHWG
Trigger: TCCCCAATGCTCTACAAGCAACTGCGTCAGGCCTGT...ATACACAGGAACTCGGCGTGGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CAA 90 bp CAGCTTTTGTCCAAAGTCGGCTTGCAGGAGGCGGCAGGATTCAGCGCCATGGGGTCTGATCATGATCATTaGTCTGCAGTGGTCCTGCCA +
Preference number: 5 (lower is better)
Translates to: QLLSKVGLQEAAGFSAMGSDHDH*SAVVLP
Trigger: TGGCAGGACCACTGCAGACAAATGATCATGATCAGA...CCCCATGGCGCTGAATCCTGCCGCCTCCTGCAAGCCGACTTTGGACAAAAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488558.2
CDS-3UTR CAA 90 bp CATCTGCAGGTTGAAGTCTTGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCCAACATGCCTTCCAGCTaGCTGGTGAAGGCTGCACCG +
Preference number: 5 (lower is better)
Translates to: HLQVEVLSLVKDDPGATSNMPSS*LVKAAP
Trigger: CGGTGCAGCCTTCACCAGCAAGCTGGAAGGCATGTT...GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp CGCAGCAGGGCGGACACCATGGCCTTGGCACCTCAGGGAGCTCACTTAGAAACCATGTCCCAAAGTAGTTaGCCACTGAAGTTTTCGACC +
Preference number: 5 (lower is better)
Translates to: RSRADTMALAPQGAHLETMSQSS*PLKFST
Trigger: GGTCGAAAACTTCAGTGGCAAACTACTTTGGGACAT...GGTTTCTAAGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGCTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp CGCAGCAGGGCGGACACCATGGCCTTGGCACCTCAGGGAGCTCACTTAGAAACCCTAGGGTCTTCTTCATaGTGCACTCATGATCACACA +
Preference number: 5 (lower is better)
Translates to: RSRADTMALAPQGAHLETLGSSS*CTHDHT
Trigger: TGTGTGATCATGAGTGCACAATGAAGAAGACCCTAG...GGTTTCTAAGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGCTGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp GGTGTATACAGTCCCCGAAAGATGACGGACGATGAGTGCTATGTGCTCAGGAGGTTCCTGCTCCACTCCTaGCTGCTGGCTAGACACCTG +
Preference number: 5 (lower is better)
Translates to: GVYSPRKMTDDECYVLRRFLLHS*LLARHL
Trigger: CAGGTGTCTAGCCAGCAGCAAGGAGTGGAGCAGGAA...CCTCCTGAGCACATAGCACTCATCGTCCGTCATCTTTCGGGGACTGTATACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488558.2
CDS-3UTR CAA 90 bp AATCAGACGGTGAGACCGGACACAGCTTTTGTCCAAAGTCGGCTTGCAGGAGGCGACCGGACACAGCTTTaGTCCAAAGTCGGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: NQTVRPDTAFVQSRLAGGDRTQL*SKVGLQ
Trigger: CTGCAAGCCGACTTTGGACAAAAGCTGTGTCCGGTC...GCCTCCTGCAAGCCGACTTTGGACAAAAGCTGTGTCCGGTCTCACCGTCTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488558.2
CDS TCA 90 bp GGCACAGGTGTGCTTCCTGCTCTGAGGGTACATTCTAGTGTTTCATaGAGGGGAACCGTCTGCAGATGCGTCAGGCCACGTAGTGGTACT +
Preference number: 5 (lower is better)
Translates to: GTGVLPALRVHSSVS*RGTVCRCVRPRSGT
Trigger: AGTACCACTACGTGGCCTGACGCATCTGCAGACGGTTCCCCTTCATGAAACACTAGAATGTACCCTCAGAGCAGGAAGCACACCTGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp GGTGAGACCGGACACAGCTTTTGTCCAAAGTCGGCTTGCAGGAGGCGGCAGGATGTTGCTTGTAGAGCATaGGGGAGACTTTGTGAGAAC +
Preference number: 5 (lower is better)
Translates to: GETGHSFCPKSACRRRQDVACRA*GRLCEN
Trigger: GTTCTCACAAAGTCTCCCCAATGCTCTACAAGCAAC...ATCCTGCCGCCTCCTGCAAGCCGACTTTGGACAAAAGCTGTGTCCGGTCTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488558.2
CDS-3UTR CAA 90 bp CATCTGCAGGTTGAAGTCTTGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCCACAGGCCTGACGCAGTaGCTTGTAGAGCATTGGGGA +
Preference number: 5 (lower is better)
Translates to: HLQVEVLSLVKDDPGATSTGLTQ*LVEHWG
Trigger: TCCCCAATGCTCTACAAGCAACTGCGTCAGGCCTGT...GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp CGCAGCAGGGCGGACACCATGGCCTTGGCACCTCAGGGAGCTCACTTAGAAACCTTGTCTTTCTCAGGATaGATTACGATCGCTGTTCCA +
Preference number: 5 (lower is better)
Translates to: RSRADTMALAPQGAHLETLSFSG*ITIAVP
Trigger: TGGAACAGCGATCGTAATCAATCCTGAGAAAGACAA...GGTTTCTAAGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGCTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp CGCAGCAGGGCGGACACCATGGCCTTGGCACCTCAGGGAGCTCACTTAGAAACCTCTGTGGCTTCTTTGTaGCCTGCTCTTAACTTTGAA +
Preference number: 5 (lower is better)
Translates to: RSRADTMALAPQGAHLETSVASL*PALNFE
Trigger: TTCAAAGTTAAGAGCAGGCAACAAAGAAGCCACAGA...GGTTTCTAAGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGCTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp TTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCATGAAGGGCCCTTGACAGGCCTGACGCAGTaGCTTGTAGAGCATTGGGGA +
Preference number: 5 (lower is better)
Translates to: FASFEPWLFLMFTHEGPLTGLTQ*LVEHWG
Trigger: TCCCCAATGCTCTACAAGCAACTGCGTCAGGCCTGT...CAAGGGCCCTTCATGGGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp CATCTGCAGGTTGAAGTCTTGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCCTGGTCCACCTTGTCCTaGAAGTCCAACAGGTCTTGG +
Preference number: 5 (lower is better)
Translates to: HLQVEVLSLVKDDPGATSWSTLS*KSNRSW
Trigger: CCAAGACCTGTTGGACTTCAAGGACAAGGTGGACCA...GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp TTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCACGCCGAGTTCCTGTGTATGACTCCTTCATCAGGTaGACGAACCGCTCATTCTTC +
Preference number: 5 (lower is better)
Translates to: FQFLITHGPFVPRRVPVYDSFIR*TNRSFF
Trigger: GAAGAATGAGCGGTTCGTCAACCTGATGAAGGAGTC...ATACACAGGAACTCGGCGTGGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CAA 90 bp CATCTGCAGGTTGAAGTCTTGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCCAACAGGATCATGATCTaGTCCAACGTCCGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: HLQVEVLSLVKDDPGATSNRIMI*SNVRSS
Trigger: GCTGGAGCGGACGTTGGACAAGATCATGATCCTGTT...GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp CGCAGCAGGGCGGACACCATGGCCTTGGCACCTCAGGGAGCTCACTTAGAAACCCAAACTTGCAGCTTTTaGACACAAGAACAAGACCTT +
Preference number: 5 (lower is better)
Translates to: RSRADTMALAPQGAHLETQTCSF*TQEQDL
Trigger: AAGGTCTTGTTCTTGTGTCAAAAAGCTGCAAGTTTG...GGTTTCTAAGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGCTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp TTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCACGCCGAGTTCCTGTGTATGGAAAGAATAATCACTaGAGAGGGGACAGGTGCTCC +
Preference number: 5 (lower is better)
Translates to: FQFLITHGPFVPRRVPVYGKNNH*RGDRCS
Trigger: GGAGCACCTGTCCCCTCTCAAGTGATTATTCTTTCC...ATACACAGGAACTCGGCGTGGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CAA 90 bp ATGGGTAGTTGTTGCAAAGTTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCAGAAGAGAGGATCGCTaGAGCCCAGAAGGTAGAGGC +
Preference number: 5 (lower is better)
Translates to: MGSCCKVPVPDHTRPLCARREDR*SPEGRG
Trigger: GCCTCTACCTTCTGGGCTCAAGCGATCCTCTCTTCT...GGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAACTTTGCAACAACTACCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CAA 90 bp TTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCATGAAGGGCCCTTGAGAAGAGAGGATCGCTaGAGCCCAGAAGGTAGAGGC +
Preference number: 5 (lower is better)
Translates to: FASFEPWLFLMFTHEGPLRREDR*SPEGRG
Trigger: GCCTCTACCTTCTGGGCTCAAGCGATCCTCTCTTCT...CAAGGGCCCTTCATGGGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CAA 90 bp CGCAGCAGGGCGGACACCATGGCCTTGGCACCTCAGGGAGCTCACTTAGAAACCGTGTATTTGGCTTATTaGTGGACTTTCTTGTTCCAG +
Preference number: 5 (lower is better)
Translates to: RSRADTMALAPQGAHLETVYLAY*WTFLFQ
Trigger: CTGGAACAAGAAAGTCCACAAATAAGCCAAATACAC...GGTTTCTAAGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGCTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CAA 90 bp CGCAGCAGGGCGGACACCATGGCCTTGGCACCTCAGGGAGCTCACTTAGAAACCTTTACACGTAAATACTaGACCACTTGGAACTTCCCT +
Preference number: 5 (lower is better)
Translates to: RSRADTMALAPQGAHLETFTRKY*TTWNFP
Trigger: AGGGAAGTTCCAAGTGGTCAAGTATTTACGTGTAAA...GGTTTCTAAGTGAGCTCCCTGAGGTGCCAAGGCCATGGTGTCCGCCCTGCTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CAA 90 bp AAACAGGGACTGCCAGACTCAATCTTAGAATGGAAACACAAACACACTAGCCCCGTGTCCCCTCCTGCCTaGGACCCTCAGGCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: KQGLPDSILEWKHKHTSPVSPPA*DPQAFS
Trigger: GGAAAAGGCCTGAGGGTCCAAGGCAGGAGGGGACAC...GGGGCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTCTGGCAGTCCCTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375441.7
CDS-3UTR CAA 90 bp CTGGAAAGAGCCGCTCCAGGCTCAACCTCCAGTCGTCAGAGAGAAACCAAGACCTTCACGTTAATGATTTaGGCAGATGGAGGGCAGCGT +
Preference number: 5 (lower is better)
Translates to: LERAAPGSTSSRQRETKTFTLMI*ADGGQR
Trigger: ACGCTGCCCTCCATCTGCCAAAATCATTAACGTGAA...GGTCTTGGTTTCTCTCTGACGACTGGAGGTTGAGCCTGGAGCGGCTCTTTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488558.2
CDS-3UTR CAA 90 bp AATCAGAGTCCCAGAAATGGCACAGGTGTGCTTCCTGCTCTGAGGGTACATTCTACAGGCCTGACGCAGTaGCTTGTAGAGCATTGGGGA +
Preference number: 5 (lower is better)
Translates to: NQSPRNGTGVLPALRVHSTGLTQ*LVEHWG
Trigger: TCCCCAATGCTCTACAAGCAACTGCGTCAGGCCTGT...AGAATGTACCCTCAGAGCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp AGGGTGCGTCATCCATTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCTGGTCCACCTTGTCCTaGAAGTCCAACAGGTCTTGG +
Preference number: 5 (lower is better)
Translates to: RVRHPFASFEPWLFLMFTWSTLS*KSNRSW
Trigger: CCAAGACCTGTTGGACTTCAAGGACAAGGTGGACCA...GGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp ATGGGTAGTTGTTGCAAAGTTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCTGGTCCACCTTGTCCTaGAAGTCCAACAGGTCTTGG +
Preference number: 5 (lower is better)
Translates to: MGSCCKVPVPDHTRPLCAWSTLS*KSNRSW
Trigger: CCAAGACCTGTTGGACTTCAAGGACAAGGTGGACCA...GGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAACTTTGCAACAACTACCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CAA 90 bp CATCTGCAGGTTGAAGTCTTGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCCGACTCCTTCATCAGGTaGACGAACCGCTCATTCTTC +
Preference number: 5 (lower is better)
Translates to: HLQVEVLSLVKDDPGATSDSFIR*TNRSFF
Trigger: GAAGAATGAGCGGTTCGTCAACCTGATGAAGGAGTC...GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp TTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCACGCCGAGTTCCTGTGTATTTGAATCCACATGCTTaGCGATCAGTTCTGCAGGCT +
Preference number: 5 (lower is better)
Translates to: FQFLITHGPFVPRRVPVYLNPHA*RSVLQA
Trigger: AGCCTGCAGAACTGATCGCAAAGCATGTGGATTCAA...ATACACAGGAACTCGGCGTGGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CAA 90 bp TTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCATGAAGGGCCCTTGAAGCCATCTCCCTCGTaGAACATGAGGAGCACCAGT +
Preference number: 5 (lower is better)
Translates to: FASFEPWLFLMFTHEGPLKPSPS*NMRSTS
Trigger: ACTGGTGCTCCTCATGTTCAACGAGGGAGATGGCTT...CAAGGGCCCTTCATGGGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp AGGGTGCGTCATCCATTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCAAGCCATCTCCCTCGTaGAACATGAGGAGCACCAGT +
Preference number: 5 (lower is better)
Translates to: RVRHPFASFEPWLFLMFTKPSPS*NMRSTS
Trigger: ACTGGTGCTCCTCATGTTCAACGAGGGAGATGGCTT...GGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp ATGGGTAGTTGTTGCAAAGTTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCAAGCCATCTCCCTCGTaGAACATGAGGAGCACCAGT +
Preference number: 5 (lower is better)
Translates to: MGSCCKVPVPDHTRPLCAKPSPS*NMRSTS
Trigger: ACTGGTGCTCCTCATGTTCAACGAGGGAGATGGCTT...GGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAACTTTGCAACAACTACCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS GCA 90 bp ATCACAGAAAGCCAATGCAGATGGTTCTCTAAACGGAAGGATCTGTaGCTGGACGTGGTCTTCACAGGCCTGACGCAGTTGCTTGTAGAG +
Preference number: 5 (lower is better)
Translates to: ITESQCRWFSKRKDL*LDVVFTGLTQLLVE
Trigger: CTCTACAAGCAACTGCGTCAGGCCTGTGAAGACCACGTCCAGGCACAGATCCTTCCGTTTAGAGAACCATCTGCATTGGCTTTCTGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474116.5
CDS GCA 90 bp AGTCGCCAAGTCGATGGGACTTTGTTGCCTATCACAGAAAGCCAATaGAGATGGTTCTCTAAACGGAAGGATCTGTGCCTGGACGTGGTC +
Preference number: 5 (lower is better)
Translates to: SRQVDGTLLPITESQ*RWFSKRKDLCLDVV
Trigger: GACCACGTCCAGGCACAGATCCTTCCGTTTAGAGAACCATCTGCATTGGCTTTCTGTGATAGGCAACAAAGTCCCATCGACTTGGCGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474116.5
CDS-3UTR CAA 90 bp TTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCATGAAGGGCCCTTGGCTGTTCCAAAAGTCTaGATGTACTCGCTCCAGTGC +
Preference number: 5 (lower is better)
Translates to: FASFEPWLFLMFTHEGPLAVPKV*MYSLQC
Trigger: GCACTGGAGCGAGTACATCAAGACTTTTGGAACAGC...CAAGGGCCCTTCATGGGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp AATCAGAGTCCCAGAAATGGCACAGGTGTGCTTCCTGCTCTGAGGGTACATTCTTGGTCCACCTTGTCCTaGAAGTCCAACAGGTCTTGG +
Preference number: 5 (lower is better)
Translates to: NQSPRNGTGVLPALRVHSWSTLS*KSNRSW
Trigger: CCAAGACCTGTTGGACTTCAAGGACAAGGTGGACCA...AGAATGTACCCTCAGAGCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp AGGGTGCGTCATCCATTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCGACTCCTTCATCAGGTaGACGAACCGCTCATTCTTC +
Preference number: 5 (lower is better)
Translates to: RVRHPFASFEPWLFLMFTDSFIR*TNRSFF
Trigger: GAAGAATGAGCGGTTCGTCAACCTGATGAAGGAGTC...GGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp TTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCACGCCGAGTTCCTGTGTATTTGTTGGGTCTCTTGTaGATGAACGTCTCAAAGGAC +
Preference number: 5 (lower is better)
Translates to: FQFLITHGPFVPRRVPVYLLGLL*MNVSKD
Trigger: GTCCTTTGAGACGTTCATCAACAAGAGACCCAACAA...ATACACAGGAACTCGGCGTGGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CAA 90 bp CATCTGCAGGTTGAAGTCTTGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCCTTGAATCCACATGCTTaGCGATCAGTTCTGCAGGCT +
Preference number: 5 (lower is better)
Translates to: HLQVEVLSLVKDDPGATSLNPHA*RSVLQA
Trigger: AGCCTGCAGAACTGATCGCAAAGCATGTGGATTCAA...GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp ATGGGTAGTTGTTGCAAAGTTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCGAAAGCTCCATGTCCTaGAACATGCCTTCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: MGSCCKVPVPDHTRPLCAESSMS*NMPSSL
Trigger: CAAGCTGGAAGGCATGTTCAAGGACATGGAGCTTTC...GGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAACTTTGCAACAACTACCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CAA 90 bp AGGGTGCGTCATCCATTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCGAAAGCTCCATGTCCTaGAACATGCCTTCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: RVRHPFASFEPWLFLMFTESSMS*NMPSSL
Trigger: CAAGCTGGAAGGCATGTTCAAGGACATGGAGCTTTC...GGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp CATCTGCAGGTTGAAGTCTTGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCCCTGCAGGTTGAAGTCTaGAGCCTTGTGAAAGATGAC +
Preference number: 5 (lower is better)
Translates to: HLQVEVLSLVKDDPGATSLQVEV*SLVKDD
Trigger: GTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAG...GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp AGGGTGCGTCATCCATTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCTGCAGGTTGAAGTCTaGAGCCTTGTGAAAGATGAC +
Preference number: 5 (lower is better)
Translates to: RVRHPFASFEPWLFLMFTLQVEV*SLVKDD
Trigger: GTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAG...GGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp TTTCTTCAGTCACAGATTTTCATTTGCTCCTTAGATGACCTGGGTATGCAACCATCACACACGGCCCCTTaGTGCCACGCCGAGTTCCTG +
Preference number: 5 (lower is better)
Translates to: FLQSQIFICSLDDLGMQPSHTAP*CHAEFL
Trigger: CAGGAACTCGGCGTGGCACAAAGGGGCCGTGTGTGA...TGGTTGCATACCCAGGTCATCTAAGGAGCAAATGAAAATCTGTGACTGAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS TCA 90 bp CACGCAACTGTGAACGAGGCTGTGAATACGAAGGTCATCATTCCTTaGCTGGGTTACGGGTTACATCATATAAGGCCCTATCTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: HATVNEAVNTKVIIP*LGYGLHHIRPYLSR
Trigger: CCTGCTGAGATAGGGCCTTATATGATGTAACCCGTAACCCAGTCAAGGAATGATGACCTTCGTATTCACAGCCTCGTTCACAGTTGCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474116.5
CDS CCA 90 bp CAAGTCGATGGGACTTTGTTGCCTATCACAGAAAGCCAATGCAGATaGTTCTCTAAACGGAAGGATCTGTGCCTGGACGTGGTCTTCACA +
Preference number: 5 (lower is better)
Translates to: QVDGTLLPITESQCR*FSKRKDLCLDVVFT
Trigger: TGTGAAGACCACGTCCAGGCACAGATCCTTCCGTTTAGAGAACCATCTGCATTGGCTTTCTGTGATAGGCAACAAAGTCCCATCGACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474116.5
CDS-3UTR CAA 90 bp AATCAGAGTCCCAGAAATGGCACAGGTGTGCTTCCTGCTCTGAGGGTACATTCTGTTGCTTGTAGAGCATaGGGGAGACTTTGTGAGAAC +
Preference number: 5 (lower is better)
Translates to: NQSPRNGTGVLPALRVHSVACRA*GRLCEN
Trigger: GTTCTCACAAAGTCTCCCCAATGCTCTACAAGCAAC...AGAATGTACCCTCAGAGCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp AATCAGAGTCCCAGAAATGGCACAGGTGTGCTTCCTGCTCTGAGGGTACATTCTTCTGATCATGATCATTaGTCTGCAGTGGTCCTGCCA +
Preference number: 5 (lower is better)
Translates to: NQSPRNGTGVLPALRVHSSDHDH*SAVVLP
Trigger: TGGCAGGACCACTGCAGACAAATGATCATGATCAGA...AGAATGTACCCTCAGAGCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp TTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCATGAAGGGCCCTTGGAAGTCCAACAGGTCTaGGACCATGTCTTTGTCTTT +
Preference number: 5 (lower is better)
Translates to: FASFEPWLFLMFTHEGPLEVQQV*DHVFVF
Trigger: AAAGACAAAGACATGGTCCAAGACCTGTTGGACTTC...CAAGGGCCCTTCATGGGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp AGGGTGCGTCATCCATTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCGAAGTCCAACAGGTCTaGGACCATGTCTTTGTCTTT +
Preference number: 5 (lower is better)
Translates to: RVRHPFASFEPWLFLMFTEVQQV*DHVFVF
Trigger: AAAGACAAAGACATGGTCCAAGACCTGTTGGACTTC...GGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp AGGGTGCGTCATCCATTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCTTGTTGGGTCTCTTGTaGATGAACGTCTCAAAGGAC +
Preference number: 5 (lower is better)
Translates to: RVRHPFASFEPWLFLMFTLLGLL*MNVSKD
Trigger: GTCCTTTGAGACGTTCATCAACAAGAGACCCAACAA...GGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp AATCAGAGTCCCAGAAATGGCACAGGTGTGCTTCCTGCTCTGAGGGTACATTCTGGCTTGTTGGGTCTCTaGTTGATGAACGTCTCAAAG +
Preference number: 5 (lower is better)
Translates to: NQSPRNGTGVLPALRVHSGLLGL*LMNVSK
Trigger: CTTTGAGACGTTCATCAACAAGAGACCCAACAAGCC...AGAATGTACCCTCAGAGCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp AGGGTGCGTCATCCATTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCTGCCTGCTCTTAACTTaGAATCCACATGCTTTGCGA +
Preference number: 5 (lower is better)
Translates to: RVRHPFASFEPWLFLMFTCLLLT*NPHALR
Trigger: TCGCAAAGCATGTGGATTCAAAGTTAAGAGCAGGCA...GGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp AAACAGGGACTGCCAGACTCAATCTTAGAATGGAAACACAAACACACTAGCCCCAACAGGATCATGATCTaGTCCAACGTCCGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: KQGLPDSILEWKHKHTSPNRIMI*SNVRSS
Trigger: GCTGGAGCGGACGTTGGACAAGATCATGATCCTGTT...GGGGCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTCTGGCAGTCCCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp CAGAGAACAAGGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATAACATGCCTTCCAGCTaGCTGGTGAAGGCTGCACCG +
Preference number: 5 (lower is better)
Translates to: QRTRIVPAHDCKNQTKLYNMPSS*LVKAAP
Trigger: CGGTGCAGCCTTCACCAGCAAGCTGGAAGGCATGTT...ATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCCTTGTTCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp CAGCATCTAGGGTCTTCTTCATTGTGCACTCATGATCACACACGAGAACAAACCGCTGTTCCAAAAGTCTaGATGTACTCGCTCCAGTGC +
Preference number: 5 (lower is better)
Translates to: QHLGSSSLCTHDHTREQTAVPKV*MYSLQC
Trigger: GCACTGGAGCGAGTACATCAAGACTTTTGGAACAGC...GGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAGACCCTAGATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp AGGGTGCGTCATCCATTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCTTGTCTTTCTCAGGATaGATTACGATCGCTGTTCCA +
Preference number: 5 (lower is better)
Translates to: RVRHPFASFEPWLFLMFTLSFSG*ITIAVP
Trigger: TGGAACAGCGATCGTAATCAATCCTGAGAAAGACAA...GGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp ATGGGTAGTTGTTGCAAAGTTCCAGTTCCTGATCACACACGGCCCCTTTGTGCCTTGTCTTTCTCAGGATaGATTACGATCGCTGTTCCA +
Preference number: 5 (lower is better)
Translates to: MGSCCKVPVPDHTRPLCALSFSG*ITIAVP
Trigger: TGGAACAGCGATCGTAATCAATCCTGAGAAAGACAA...GGCACAAAGGGGCCGTGTGTGATCAGGAACTGGAACTTTGCAACAACTACCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CAA 90 bp CAGCATCTAGGGTCTTCTTCATTGTGCACTCATGATCACACACGAGAACAAACCGACTCCTTCATCAGGTaGACGAACCGCTCATTCTTC +
Preference number: 5 (lower is better)
Translates to: QHLGSSSLCTHDHTREQTDSFIR*TNRSFF
Trigger: GAAGAATGAGCGGTTCGTCAACCTGATGAAGGAGTC...GGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAGACCCTAGATGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp AATCAGAGTCCCAGAAATGGCACAGGTGTGCTTCCTGCTCTGAGGGTACATTCTTTGTTGGGTCTCTTGTaGATGAACGTCTCAAAGGAC +
Preference number: 5 (lower is better)
Translates to: NQSPRNGTGVLPALRVHSLLGLL*MNVSKD
Trigger: GTCCTTTGAGACGTTCATCAACAAGAGACCCAACAA...AGAATGTACCCTCAGAGCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp AAACAGGGACTGCCAGACTCAATCTTAGAATGGAAACACAAACACACTAGCCCCGCACCGCACTCATGCTaGAGCTTTGACAACATAGAC +
Preference number: 5 (lower is better)
Translates to: KQGLPDSILEWKHKHTSPAPHSC*SFDNID
Trigger: GTCTATGTTGTCAAAGCTCAAGCATGAGTGCGGTGC...GGGGCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTCTGGCAGTCCCTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp CAGCATCTAGGGTCTTCTTCATTGTGCACTCATGATCACACACGAGAACAAACCGCACCGCACTCATGCTaGAGCTTTGACAACATAGAC +
Preference number: 5 (lower is better)
Translates to: QHLGSSSLCTHDHTREQTAPHSC*SFDNID
Trigger: GTCTATGTTGTCAAAGCTCAAGCATGAGTGCGGTGC...GGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAGACCCTAGATGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp AATCAGAGTCCCAGAAATGGCACAGGTGTGCTTCCTGCTCTGAGGGTACATTCTATGTCCCAAAGTAGTTaGCCACTGAAGTTTTCGACC +
Preference number: 5 (lower is better)
Translates to: NQSPRNGTGVLPALRVHSMSQSS*PLKFST
Trigger: GGTCGAAAACTTCAGTGGCAAACTACTTTGGGACAT...AGAATGTACCCTCAGAGCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp CATCTGCAGGTTGAAGTCTTGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCCCCATTAAAAATGAACTaGTCTCCATCTTCCACTTCC +
Preference number: 5 (lower is better)
Translates to: HLQVEVLSLVKDDPGATSPLKMN*SPSSTS
Trigger: GGAAGTGGAAGATGGAGACAAGTTCATTTTTAATGG...GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp CATCTGCAGGTTGAAGTCTTGAGCCTTGTGAAAGATGACCCAGGAGCCACCTCCCAAACTTGCAGCTTTTaGACACAAGAACAAGACCTT +
Preference number: 5 (lower is better)
Translates to: HLQVEVLSLVKDDPGATSQTCSF*TQEQDL
Trigger: AAGGTCTTGTTCTTGTGTCAAAAAGCTGCAAGTTTG...GGAGGTGGCTCCTGGGTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp GGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTATTGCAATCACAGGCCTGACGCAGTaGCTTGTAGAGCATTGGGGA +
Preference number: 5 (lower is better)
Translates to: GSSLRMTVKTKPNFIIAITGLTQ*LVEHWG
Trigger: TCCCCAATGCTCTACAAGCAACTGCGTCAGGCCTGT...GATTGCAATAATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp CAGCATCTAGGGTCTTCTTCATTGTGCACTCATGATCACACACGAGAACAAACCTCTGATCATGATCATTaGTCTGCAGTGGTCCTGCCA +
Preference number: 5 (lower is better)
Translates to: QHLGSSSLCTHDHTREQTSDHDH*SAVVLP
Trigger: TGGCAGGACCACTGCAGACAAATGATCATGATCAGA...GGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAGACCCTAGATGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp AAACAGGGACTGCCAGACTCAATCTTAGAATGGAAACACAAACACACTAGCCCCTCTGATCATGATCATTaGTCTGCAGTGGTCCTGCCA +
Preference number: 5 (lower is better)
Translates to: KQGLPDSILEWKHKHTSPSDHDH*SAVVLP
Trigger: TGGCAGGACCACTGCAGACAAATGATCATGATCAGA...GGGGCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTCTGGCAGTCCCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp AATCAGAGTCCCAGAAATGGCACAGGTGTGCTTCCTGCTCTGAGGGTACATTCTTTGTCTTTCTCAGGATaGATTACGATCGCTGTTCCA +
Preference number: 5 (lower is better)
Translates to: NQSPRNGTGVLPALRVHSLSFSG*ITIAVP
Trigger: TGGAACAGCGATCGTAATCAATCCTGAGAAAGACAA...AGAATGTACCCTCAGAGCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp CAGCATCTAGGGTCTTCTTCATTGTGCACTCATGATCACACACGAGAACAAACCGGCTTGTTGGGTCTCTaGTTGATGAACGTCTCAAAG +
Preference number: 5 (lower is better)
Translates to: QHLGSSSLCTHDHTREQTGLLGL*LMNVSK
Trigger: CTTTGAGACGTTCATCAACAAGAGACCCAACAAGCC...GGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAGACCCTAGATGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp AAACAGGGACTGCCAGACTCAATCTTAGAATGGAAACACAAACACACTAGCCCCTTGAATCCACATGCTTaGCGATCAGTTCTGCAGGCT +
Preference number: 5 (lower is better)
Translates to: KQGLPDSILEWKHKHTSPLNPHA*RSVLQA
Trigger: AGCCTGCAGAACTGATCGCAAAGCATGTGGATTCAA...GGGGCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTCTGGCAGTCCCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp CAGAGAACAAGGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATAACAGGATCATGATCTaGTCCAACGTCCGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: QRTRIVPAHDCKNQTKLYNRIMI*SNVRSS
Trigger: GCTGGAGCGGACGTTGGACAAGATCATGATCCTGTT...ATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCCTTGTTCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp AGGGTGCGTCATCCATTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCCATTAAAAATGAACTaGTCTCCATCTTCCACTTCC +
Preference number: 5 (lower is better)
Translates to: RVRHPFASFEPWLFLMFTPLKMN*SPSSTS
Trigger: GGAAGTGGAAGATGGAGACAAGTTCATTTTTAATGG...GGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAATGGATGACGCACCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp TTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCATGAAGGGCCCTTGCCATTAAAAATGAACTaGTCTCCATCTTCCACTTCC +
Preference number: 5 (lower is better)
Translates to: FASFEPWLFLMFTHEGPLPLKMN*SPSSTS
Trigger: GGAAGTGGAAGATGGAGACAAGTTCATTTTTAATGG...CAAGGGCCCTTCATGGGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp TTCGCCAGCTTTGAACCCTGGCTCTTTCTAATGTTCACCCATGAAGGGCCCTTGCAAACTTGCAGCTTTTaGACACAAGAACAAGACCTT +
Preference number: 5 (lower is better)
Translates to: FASFEPWLFLMFTHEGPLQTCSF*TQEQDL
Trigger: AAGGTCTTGTTCTTGTGTCAAAAAGCTGCAAGTTTG...CAAGGGCCCTTCATGGGTGAACATTAGAAAGAGCCAGGGTTCAAAGCTGGCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp CAGAGAACAAGGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATGCTGTTCCAAAAGTCTaGATGTACTCGCTCCAGTGC +
Preference number: 5 (lower is better)
Translates to: QRTRIVPAHDCKNQTKLYAVPKV*MYSLQC
Trigger: GCACTGGAGCGAGTACATCAAGACTTTTGGAACAGC...ATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCCTTGTTCTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp AAACAGGGACTGCCAGACTCAATCTTAGAATGGAAACACAAACACACTAGCCCCGAAGTCCAACAGGTCTaGGACCATGTCTTTGTCTTT +
Preference number: 5 (lower is better)
Translates to: KQGLPDSILEWKHKHTSPEVQQV*DHVFVF
Trigger: AAAGACAAAGACATGGTCCAAGACCTGTTGGACTTC...GGGGCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTCTGGCAGTCCCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp CAGCATCTAGGGTCTTCTTCATTGTGCACTCATGATCACACACGAGAACAAACCTGCCTGCTCTTAACTTaGAATCCACATGCTTTGCGA +
Preference number: 5 (lower is better)
Translates to: QHLGSSSLCTHDHTREQTCLLLT*NPHALR
Trigger: TCGCAAAGCATGTGGATTCAAAGTTAAGAGCAGGCA...GGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAGACCCTAGATGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp CAGCATCTAGGGTCTTCTTCATTGTGCACTCATGATCACACACGAGAACAAACCTCGTCTGTGGCTTCTTaGTTGCCTGCTCTTAACTTT +
Preference number: 5 (lower is better)
Translates to: QHLGSSSLCTHDHTREQTSSVAS*LPALNF
Trigger: AAAGTTAAGAGCAGGCAACAAAGAAGCCACAGACGA...GGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGAAGACCCTAGATGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp GGGAGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACAACAGGATCATGATCTaGTCCAACGTCCGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: GSSLRNLTYEKSAIKVYNNRIMI*SNVRSS
Trigger: GCTGGAGCGGACGTTGGACAAGATCATGATCCTGTT...GTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp TCTTCATTGTGCACTCATGATCACACACGAGAACAAACCAAACTTGCAGCTTTTAACAGGATCATGATCTaGTCCAACGTCCGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SSLCTHDHTREQTKLAAFNRIMI*SNVRSS
Trigger: GCTGGAGCGGACGTTGGACAAGATCATGATCCTGTT...AAAAGCTGCAAGTTTGGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp AATCAGAGTCCCAGAAATGGCACAGGTGTGCTTCCTGCTCTGAGGGTACATTCTCAAACTTGCAGCTTTTaGACACAAGAACAAGACCTT +
Preference number: 5 (lower is better)
Translates to: NQSPRNGTGVLPALRVHSQTCSF*TQEQDL
Trigger: AAGGTCTTGTTCTTGTGTCAAAAAGCTGCAAGTTTG...AGAATGTACCCTCAGAGCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp AATCAGAGTCCCAGAAATGGCACAGGTGTGCTTCCTGCTCTGAGGGTACATTCTGTGTATTTGGCTTATTaGTGGACTTTCTTGTTCCAG +
Preference number: 5 (lower is better)
Translates to: NQSPRNGTGVLPALRVHSVYLAY*WTFLFQ
Trigger: CTGGAACAAGAAAGTCCACAAATAAGCCAAATACAC...AGAATGTACCCTCAGAGCAGGAAGCACACCTGTGCCATTTCTGGGACTCTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CAA 90 bp AAACAGGGACTGCCAGACTCAATCTTAGAATGGAAACACAAACACACTAGCCCCTCTGTGGCTTCTTTGTaGCCTGCTCTTAACTTTGAA +
Preference number: 5 (lower is better)
Translates to: KQGLPDSILEWKHKHTSPSVASL*PALNFE
Trigger: TTCAAAGTTAAGAGCAGGCAACAAAGAAGCCACAGA...GGGGCTAGTGTGTTTGTGTTTCCATTCTAAGATTGAGTCTGGCAGTCCCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTAACATGCCTTCCAGCTaGCTGGTGAAGGCTGCACCG +
Preference number: 5 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFNMPSS*LVKAAP
Trigger: CGGTGCAGCCTTCACCAGCAAGCTGGAAGGCATGTT...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp GGGAGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACGAAAGCTCCATGTCCTaGAACATGCCTTCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: GSSLRNLTYEKSAIKVYNESSMS*NMPSSL
Trigger: CAAGCTGGAAGGCATGTTCAAGGACATGGAGCTTTC...GTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp GGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTATTGCAATCGTTGCTTGTAGAGCATaGGGGAGACTTTGTGAGAAC +
Preference number: 5 (lower is better)
Translates to: GSSLRMTVKTKPNFIIAIVACRA*GRLCEN
Trigger: GTTCTCACAAAGTCTCCCCAATGCTCTACAAGCAAC...GATTGCAATAATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp TCTTCATTGTGCACTCATGATCACACACGAGAACAAACCAAACTTGCAGCTTTTGTTGCTTGTAGAGCATaGGGGAGACTTTGTGAGAAC +
Preference number: 5 (lower is better)
Translates to: SSLCTHDHTREQTKLAAFVACRA*GRLCEN
Trigger: GTTCTCACAAAGTCTCCCCAATGCTCTACAAGCAAC...AAAAGCTGCAAGTTTGGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp GGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTATTGCAATCTCTGATCATGATCATTaGTCTGCAGTGGTCCTGCCA +
Preference number: 5 (lower is better)
Translates to: GSSLRMTVKTKPNFIIAISDHDH*SAVVLP
Trigger: TGGCAGGACCACTGCAGACAAATGATCATGATCAGA...GATTGCAATAATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp TTTCTTCAGTCACAGATTTTCATTTGCTCCTTAGATGACCTGGGTATGCAACCAGGCTTGTTGGGTCTCTaGTTGATGAACGTCTCAAAG +
Preference number: 5 (lower is better)
Translates to: FLQSQIFICSLDDLGMQPGLLGL*LMNVSK
Trigger: CTTTGAGACGTTCATCAACAAGAGACCCAACAAGCC...TGGTTGCATACCCAGGTCATCTAAGGAGCAAATGAAAATCTGTGACTGAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CAA 90 bp GGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTATTGCAATCGGCTTGTTGGGTCTCTaGTTGATGAACGTCTCAAAG +
Preference number: 5 (lower is better)
Translates to: GSSLRMTVKTKPNFIIAIGLLGL*LMNVSK
Trigger: CTTTGAGACGTTCATCAACAAGAGACCCAACAAGCC...GATTGCAATAATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp GGGAGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACCTGCAGGTTGAAGTCTaGAGCCTTGTGAAAGATGAC +
Preference number: 5 (lower is better)
Translates to: GSSLRNLTYEKSAIKVYNLQVEV*SLVKDD
Trigger: GTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAG...GTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp TTTCTTCAGTCACAGATTTTCATTTGCTCCTTAGATGACCTGGGTATGCAACCAGAAGTCCAACAGGTCTaGGACCATGTCTTTGTCTTT +
Preference number: 5 (lower is better)
Translates to: FLQSQIFICSLDDLGMQPEVQQV*DHVFVF
Trigger: AAAGACAAAGACATGGTCCAAGACCTGTTGGACTTC...TGGTTGCATACCCAGGTCATCTAAGGAGCAAATGAAAATCTGTGACTGAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CAA 90 bp CCTCTGCTTCACAACATCAAGACTTTAAGTCTCCATAAACTTTTTACAGTTTACTGGTCCACCTTGTCCTaGAAGTCCAACAGGTCTTGG +
Preference number: 5 (lower is better)
Translates to: PLLHNIKTLSLHKLFTVYWSTLS*KSNRSW
Trigger: CCAAGACCTGTTGGACTTCAAGGACAAGGTGGACCA...GTAAACTGTAAAAAGTTTATGGAGACTTAAAGTCTTGATGTTGTGAAGCAGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp GGGAGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTGTTGGGTCTCTTGTaGATGAACGTCTCAAAGGAC +
Preference number: 5 (lower is better)
Translates to: GSSLRNLTYEKSAIKVYNLLGLL*MNVSKD
Trigger: GTCCTTTGAGACGTTCATCAACAAGAGACCCAACAA...GTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp GGGAGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTGCCTGCTCTTAACTTaGAATCCACATGCTTTGCGA +
Preference number: 5 (lower is better)
Translates to: GSSLRNLTYEKSAIKVYNCLLLT*NPHALR
Trigger: TCGCAAAGCATGTGGATTCAAAGTTAAGAGCAGGCA...GTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp TCTTCATTGTGCACTCATGATCACACACGAGAACAAACCAAACTTGCAGCTTTTTGCCTGCTCTTAACTTaGAATCCACATGCTTTGCGA +
Preference number: 5 (lower is better)
Translates to: SSLCTHDHTREQTKLAAFCLLLT*NPHALR
Trigger: TCGCAAAGCATGTGGATTCAAAGTTAAGAGCAGGCA...AAAAGCTGCAAGTTTGGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp GGGAGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTCGTCTGTGGCTTCTTaGTTGCCTGCTCTTAACTTT +
Preference number: 5 (lower is better)
Translates to: GSSLRNLTYEKSAIKVYNSSVAS*LPALNF
Trigger: AAAGTTAAGAGCAGGCAACAAAGAAGCCACAGACGA...GTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp TTTCTTCAGTCACAGATTTTCATTTGCTCCTTAGATGACCTGGGTATGCAACCATCGTCTGTGGCTTCTTaGTTGCCTGCTCTTAACTTT +
Preference number: 5 (lower is better)
Translates to: FLQSQIFICSLDDLGMQPSSVAS*LPALNF
Trigger: AAAGTTAAGAGCAGGCAACAAAGAAGCCACAGACGA...TGGTTGCATACCCAGGTCATCTAAGGAGCAAATGAAAATCTGTGACTGAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CAA 90 bp TCTTCATTGTGCACTCATGATCACACACGAGAACAAACCAAACTTGCAGCTTTTTCGTCTGTGGCTTCTTaGTTGCCTGCTCTTAACTTT +
Preference number: 5 (lower is better)
Translates to: SSLCTHDHTREQTKLAAFSSVAS*LPALNF
Trigger: AAAGTTAAGAGCAGGCAACAAAGAAGCCACAGACGA...AAAAGCTGCAAGTTTGGTTTGTTCTCGTGTGTGATCATGAGTGCACAATGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTAAGCCATCTCCCTCGTaGAACATGAGGAGCACCAGT +
Preference number: 5 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFKPSPS*NMRSTS
Trigger: ACTGGTGCTCCTCATGTTCAACGAGGGAGATGGCTT...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp CAGAGAACAAGGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATCGAGTTCCTGTGTATTaGGCTTATTTGTGGACTTTC +
Preference number: 5 (lower is better)
Translates to: QRTRIVPAHDCKNQTKLYRVPVY*AYLWTF
Trigger: GAAAGTCCACAAATAAGCCAAATACACAGGAACTCG...ATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCCTTGTTCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CAA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTGACTCCTTCATCAGGTaGACGAACCGCTCATTCTTC +
Preference number: 5 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFDSFIR*TNRSFF
Trigger: GAAGAATGAGCGGTTCGTCAACCTGATGAAGGAGTC...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTGAAAGCTCCATGTCCTaGAACATGCCTTCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFESSMS*NMPSSL
Trigger: CAAGCTGGAAGGCATGTTCAAGGACATGGAGCTTTC...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp CCTCTGCTTCACAACATCAAGACTTTAAGTCTCCATAAACTTTTTACAGTTTACCTGTCTCGGAAGTTCTaGATGACCAGCTTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: PLLHNIKTLSLHKLFTVYLSRKF*MTSFLE
Trigger: CTCCAAGAAGCTGGTCATCAAGAACTTCCGAGACAG...GTAAACTGTAAAAAGTTTATGGAGACTTAAAGTCTTGATGTTGTGAAGCAGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375440.9
CDS-3UTR CAA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTGGAAAGAATAATCACTaGAGAGGGGACAGGTGCTCC +
Preference number: 5 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFGKNNH*RGDRCS
Trigger: GGAGCACCTGTCCCCTCTCAAGTGATTATTCTTTCC...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CAA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTGTTGCTTGTAGAGCATaGGGGAGACTTTGTGAGAAC +
Preference number: 5 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFVACRA*GRLCEN
Trigger: GTTCTCACAAAGTCTCCCCAATGCTCTACAAGCAAC...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTTCTGATCATGATCATTaGTCTGCAGTGGTCCTGCCA +
Preference number: 5 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFSDHDH*SAVVLP
Trigger: TGGCAGGACCACTGCAGACAAATGATCATGATCAGA...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTGGCTTGTTGGGTCTCTaGTTGATGAACGTCTCAAAG +
Preference number: 5 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFGLLGL*LMNVSK
Trigger: CTTTGAGACGTTCATCAACAAGAGACCCAACAAGCC...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp CCTCTGCTTCACAACATCAAGACTTTAAGTCTCCATAAACTTTTTACAGTTTACTTGAATCCACATGCTTaGCGATCAGTTCTGCAGGCT +
Preference number: 5 (lower is better)
Translates to: PLLHNIKTLSLHKLFTVYLNPHA*RSVLQA
Trigger: AGCCTGCAGAACTGATCGCAAAGCATGTGGATTCAA...GTAAACTGTAAAAAGTTTATGGAGACTTAAAGTCTTGATGTTGTGAAGCAGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp GGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTATTGCAATCCCATTAAAAATGAACTaGTCTCCATCTTCCACTTCC +
Preference number: 5 (lower is better)
Translates to: GSSLRMTVKTKPNFIIAIPLKMN*SPSSTS
Trigger: GGAAGTGGAAGATGGAGACAAGTTCATTTTTAATGG...GATTGCAATAATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp CCTCTGCTTCACAACATCAAGACTTTAAGTCTCCATAAACTTTTTACAGTTTACCTGCAGGTTGAAGTCTaGAGCCTTGTGAAAGATGAC +
Preference number: 5 (lower is better)
Translates to: PLLHNIKTLSLHKLFTVYLQVEV*SLVKDD
Trigger: GTCATCTTTCACAAGGCTCAAGACTTCAACCTGCAG...GTAAACTGTAAAAAGTTTATGGAGACTTAAAGTCTTGATGTTGTGAAGCAGAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp CAGAGAACAAGGATCGTCCCTGCGCATGACTGTAAAAACCAAACCAAACTTTATTTGTGTCTGGTTAACTaGGTGAATTCTTTCTTCAGT +
Preference number: 5 (lower is better)
Translates to: QRTRIVPAHDCKNQTKLYLCLVN*VNSFFS
Trigger: ACTGAAGAAAGAATTCACCAAGTTAACCAGACACAA...ATAAAGTTTGGTTTGGTTTTTACAGTCATGCGCAGGGACGATCCTTGTTCTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CAA 90 bp TTTCTTCAGTCACAGATTTTCATTTGCTCCTTAGATGACCTGGGTATGCAACCATTTACACGTAAATACTaGACCACTTGGAACTTCCCT +
Preference number: 5 (lower is better)
Translates to: FLQSQIFICSLDDLGMQPFTRKY*TTWNFP
Trigger: AGGGAAGTTCCAAGTGGTCAAGTATTTACGTGTAAA...TGGTTGCATACCCAGGTCATCTAAGGAGCAAATGAAAATCTGTGACTGAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CAA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTTTGTTGGGTCTCTTGTaGATGAACGTCTCAAAGGAC +
Preference number: 5 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFLLGLL*MNVSKD
Trigger: GTCCTTTGAGACGTTCATCAACAAGAGACCCAACAA...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTATGTCCCAAAGTAGTTaGCCACTGAAGTTTTCGACC +
Preference number: 5 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFMSQSS*PLKFST
Trigger: GGTCGAAAACTTCAGTGGCAAACTACTTTGGGACAT...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTCTAGGGTCTTCTTCATaGTGCACTCATGATCACACA +
Preference number: 5 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFLGSSS*CTHDHT
Trigger: TGTGTGATCATGAGTGCACAATGAAGAAGACCCTAG...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp GGGAGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTGTGTCTGGTTAACTaGGTGAATTCTTTCTTCAGT +
Preference number: 5 (lower is better)
Translates to: GSSLRNLTYEKSAIKVYNLCLVN*VNSFFS
Trigger: ACTGAAGAAAGAATTCACCAAGTTAACCAGACACAA...GTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCTCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375440.9
ENST00000617546.4
CDS-3UTR CAA 90 bp CCTCTGCTTCACAACATCAAGACTTTAAGTCTCCATAAACTTTTTACAGTTTACTCTGTGGCTTCTTTGTaGCCTGCTCTTAACTTTGAA +
Preference number: 5 (lower is better)
Translates to: PLLHNIKTLSLHKLFTVYSVASL*PALNFE
Trigger: TTCAAAGTTAAGAGCAGGCAACAAAGAAGCCACAGA...GTAAACTGTAAAAAGTTTATGGAGACTTAAAGTCTTGATGTTGTGAAGCAGAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTTCTGTGGCTTCTTTGTaGCCTGCTCTTAACTTTGAA +
Preference number: 5 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFSVASL*PALNFE
Trigger: TTCAAAGTTAAGAGCAGGCAACAAAGAAGCCACAGA...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS-3UTR CAA 90 bp AGCTCACTTAGAAACCTGACTTACGAAAAATCAGCCATCAAAGTTTACAACTTTCCATTAAAAATGAACTaGTCTCCATCTTCCACTTCC +
Preference number: 5 (lower is better)
Translates to: SSLRNLTYEKSAIKVYNFPLKMN*SPSSTS
Trigger: GGAAGTGGAAGATGGAGACAAGTTCATTTTTAATGG...AAAGTTGTAAACTTTGATGGCTGATTTTTCGTAAGTCAGGTTTCTAAGTGAGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS GCA 72 bp CACGTGTGGCCGCGCTCCCAGGCGGTCCGAAGGGCCTaGGGGCCACGCCGAGGGCCCGCTGTGGGCGGTGCT +
Preference number: 6 (lower is better)
Translates to: HVWPRSQAVRRA*GPRRGPAVGGA
Trigger: AGCACCGCCCACAGCGGGCCCTCGGCGTGGCCCGCAGGCCCTTCGGACCGCCTGGGAGCGCGGCCACACGTG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375441.7
CDS CCA 72 bp CGGTCCCAGGTCGCTGCCCTCACTTGCTGGCACGTGTaGCCGCGCTCCCAGGCGGTCCGAAGGGCCTGCGGG +
Preference number: 6 (lower is better)
Translates to: RSQVAALTCWHV*PRSQAVRRACG
Trigger: CCCGCAGGCCCTTCGGACCGCCTGGGAGCGCGGCCACACGTGCCAGCAAGTGAGGGCAGCGACCTGGGACCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375441.7
CDS CAA 72 bp AGGTGGGTCCTAGCCGGGGAGCGCGCGGCGGCGTGGTaGGCCCTCGGCGTGTTCCGTGTGTCCCCTCCTGCC +
Preference number: 6 (lower is better)
Translates to: RWVLAGERAAAW*ALGVFRVSPPA
Trigger: GGCAGGAGGGGACACACGGAACACGCCGAGGGCCAACCACGCCGCCGCGCGCTCCCCGGCTAGGACCCACCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375441.7
CDS CCA 72 bp AGCAGGTGGGTCCTAGCCGGGGAGCGCGCGGCGGCGTaGTTGGCCCTCGGCGTGTTCCGTGTGTCCCCTCCT +
Preference number: 6 (lower is better)
Translates to: SRWVLAGERAAA*LALGVFRVSPP
Trigger: AGGAGGGGACACACGGAACACGCCGAGGGCCAACCACGCCGCCGCGCGCTCCCCGGCTAGGACCCACCTGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375441.7
CDS CAA 90 bp GTCTGCAGCAGGTGGGTCCTAGCCGGGGAGCGCGCGGCGGCGTGGTaGGCCCTCGGCGTGTTCCGTGTGTCCCCTCCTGCCTTGGACCCT +
Preference number: 6 (lower is better)
Translates to: VCSRWVLAGERAAAW*ALGVFRVSPPALDP
Trigger: AGGGTCCAAGGCAGGAGGGGACACACGGAACACGCCGAGGGCCAACCACGCCGCCGCGCGCTCCCCGGCTAGGACCCACCTGCTGCAGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375441.7
CDS GCA 72 bp GGCCTGCGGGCCACGCCGAGGGCCCGCTGTGGGCGGTaGTGTGTCGGATGGACGCTGTTTCCCAGCAGGATG +
Preference number: 6 (lower is better)
Translates to: GLRATPRARCGR*CVGWTLFPSRM
Trigger: CATCCTGCTGGGAAACAGCGTCCATCCGACACAGCACCGCCCACAGCGGGCCCTCGGCGTGGCCCGCAGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375441.7
CDS GCA 72 bp GTCCTGCGTGTAGTTGTCGGGCAGCCGAGGTCTGTCTaGAGGGCGGAGGGAGAGCGGGCGGCTCAGGGCGCG +
Preference number: 6 (lower is better)
Translates to: VLRVVVGQPRSV*RAEGERAAQGA
Trigger: CGCGCCCTGAGCCGCCCGCTCTCCCTCCGCCCTGCAGACAGACCTCGGCTGCCCGACAACTACACGCAGGAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463426.5
ENST00000498562.2
CDS CCA 72 bp TCCGAAGGGCCTGCGGGCCACGCCGAGGGCCCGCTGTaGGCGGTGCTGTGTCGGATGGACGCTGTTTCCCAG +
Preference number: 6 (lower is better)
Translates to: SEGPAGHAEGPL*AVLCRMDAVSQ
Trigger: CTGGGAAACAGCGTCCATCCGACACAGCACCGCCCACAGCGGGCCCTCGGCGTGGCCCGCAGGCCCTTCGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375441.7
CDS CAA 90 bp GCGGCGTGGTTGGCCCTCGGCGTGTTCCGTGTGTCCCCTCCTGCCTaGGACCCTCAGGCCTTTTCCTTTCCCGCCTCGCCACCCTTCTTC +
Preference number: 6 (lower is better)
Translates to: AAWLALGVFRVSPPA*DPQAFSFPASPPFF
Trigger: GAAGAAGGGTGGCGAGGCGGGAAAGGAAAAGGCCTGAGGGTCCAAGGCAGGAGGGGACACACGGAACACGCCGAGGGCCAACCACGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375441.7
CDS GCA 72 bp AGCTCCTCGAGGTTGTACCTGATGGAGGTGCTGCTCTaGACGGCCCGCACCGCCTCGTGCAGCTTCCGCCAC +
Preference number: 6 (lower is better)
Translates to: SSSRLYLMEVLL*TARTASCSFRH
Trigger: GTGGCGGAAGCTGCACGAGGCGGTGCGGGCCGTGCAGAGCAGCACCTCCATCAGGTACAACCTCGAGGAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000463426.5
ENST00000474116.5
ENST00000488558.2
ENST00000498562.2
CDS GCA 72 bp GTGGTTGGCCCTCGGCGTGTTCCGTGTGTCCCCTCCTaGCTTGGACCCTCAGGCCTTTTCCTTTCCCGCCTC +
Preference number: 6 (lower is better)
Translates to: VVGPRRVPCVPS*LGPSGLFLSRL
Trigger: GAGGCGGGAAAGGAAAAGGCCTGAGGGTCCAAGGCAGGAGGGGACACACGGAACACGCCGAGGGCCAACCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375441.7
CDS CAA 72 bp TTGGCCCTCGGCGTGTTCCGTGTGTCCCCTCCTGCCTaGGACCCTCAGGCCTTTTCCTTTCCCGCCTCGCCA +
Preference number: 6 (lower is better)
Translates to: LALGVFRVSPPA*DPQAFSFPASP
Trigger: TGGCGAGGCGGGAAAGGAAAAGGCCTGAGGGTCCAAGGCAGGAGGGGACACACGGAACACGCCGAGGGCCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375441.7
CDS GCA 72 bp ACAGAGATTTTCCACAGCCTGATGGAGGTGCTGCTCTaGACGGCCCGCACCGCCTCGTGCAGCTTCCGCCAC +
Preference number: 6 (lower is better)
Translates to: TEIFHSLMEVLL*TARTASCSFRH
Trigger: GTGGCGGAAGCTGCACGAGGCGGTGCGGGCCGTGCAGAGCAGCACCTCCATCAGGCTGTGGAAAATCTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617546.4
CDS GCA 72 bp TCAGTCCCACTACCACAGGAACTGGCTTCCGCCAACTaGCTGCCCGTGCTAGCAAAGACCTCAGGTGAGGCC +
Preference number: 6 (lower is better)
Translates to: SVPLPQELASAN*LPVLAKTSGEA
Trigger: GGCCTCACCTGAGGTCTTTGCTAGCACGGGCAGGCAGTTGGCGGAAGCCAGTTCCTGTGGTAGTGGGACTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474116.5
CDS TCA 72 bp CTTGACTCTGCCCGTGAGACTGAGCATAGAATCCACTaGATCCTGCCTGGCCTCCTGACAGACACAACTGTG +
Preference number: 6 (lower is better)
Translates to: LDSARETEHRIH*ILPGLLTDTTV
Trigger: CACAGTTGTGTCTGTCAGGAGGCCAGGCAGGATTCAGTGGATTCTATGCTCAGTCTCACGGGCAGAGTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474116.5
CDS GCA 72 bp AGCCAATGCAGATGGTTCTCTAAACGGAAGGATCTGTaGCTGGACGTGGTCTTCACAGGCCTGACGCAGTTG +
Preference number: 6 (lower is better)
Translates to: SQCRWFSKRKDL*LDVVFTGLTQL
Trigger: CAACTGCGTCAGGCCTGTGAAGACCACGTCCAGGCACAGATCCTTCCGTTTAGAGAACCATCTGCATTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474116.5
CDS CAA 72 bp CTGTGCCTGGACGTGGTCTTCACAGGCCTGACGCAGTaGCTTGTAGAGCATTGGGGAGACTTTGTGAGAACA +
Preference number: 6 (lower is better)
Translates to: LCLDVVFTGLTQ*LVEHWGDFVRT
Trigger: TGTTCTCACAAAGTCTCCCCAATGCTCTACAAGCAACTGCGTCAGGCCTGTGAAGACCACGTCCAGGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000463426.5
ENST00000474116.5
ENST00000488558.2
ENST00000494985.5
ENST00000498562.2
ENST00000617546.4
CDS CAA 72 bp TTCGAAAGCTCCATGTCCTTGAACATGCCTTCCAGCTaGCTGGTGAAGGCTGCACCGCACTCATGCTTGAGC +
Preference number: 6 (lower is better)
Translates to: FESSMSLNMPSS*LVKAAPHSCLS
Trigger: GCTCAAGCATGAGTGCGGTGCAGCCTTCACCAGCAAGCTGGAAGGCATGTTCAAGGACATGGAGCTTTCGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000470067.5
ENST00000617546.4
CDS TCA 72 bp CTGAGCATAGAATCCACTGAATCCTGCCTGGCCTCCTaGCAGACACAACTGTGCGCTGATAAGTGGGTGTCT +
Preference number: 6 (lower is better)
Translates to: LSIESTESCLAS*QTQLCADKWVS
Trigger: AGACACCCACTTATCAGCGCACAGTTGTGTCTGTCAGGAGGCCAGGCAGGATTCAGTGGATTCTATGCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474116.5
CDS CCA 72 bp ACAGTTCTAATCCCATATCCCAGATGGAGGGCAGCGTaGAGTTCTGCAGCACATAGGTGCGGTCCAAGAACA +
Preference number: 6 (lower is better)
Translates to: TVLIPYPRWRAA*SSAAHRCGPRT
Trigger: TGTTCTTGGACCGCACCTATGTGCTGCAGAACTCCACGCTGCCCTCCATCTGGGATATGGGATTAGAACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000498562.2
ENST00000617546.4
CDS CCA 72 bp CCTATCTCAGCAGGTCAGACAGGCAGATTCTCCTGCTaGTCTAGAAGCAGAAAAGAGTCGTGCTGTGAGAGG +
Preference number: 6 (lower is better)
Translates to: PISAGQTGRFSC*SRSRKESCCER
Trigger: CCTCTCACAGCACGACTCTTTTCTGCTTCTAGACCAGCAGGAGAATCTGCCTGTCTGACCTGCTGAGATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474116.5
CDS CAA 90 bp ATGATGTCCTTCGAAAGCTCCATGTCCTTGAACATGCCTTCCAGCTaGCTGGTGAAGGCTGCACCGCACTCATGCTTGAGCTTTGACAAC +
Preference number: 6 (lower is better)
Translates to: MMSFESSMSLNMPSS*LVKAAPHSCLSFDN
Trigger: GTTGTCAAAGCTCAAGCATGAGTGCGGTGCAGCCTTCACCAGCAAGCTGGAAGGCATGTTCAAGGACATGGAGCTTTCGAAGGACATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000470067.5
ENST00000617546.4
CDS TCA 72 bp GGAAGCAGACCTCGATCACGTGGTCCACCTTGTCCTTaGAGTCCAACAGGTCTTGGACCATGTCTTTGTCTT +
Preference number: 6 (lower is better)
Translates to: GSRPRSRGPPCP*SPTGLGPCLCL
Trigger: AAGACAAAGACATGGTCCAAGACCTGTTGGACTTCAAGGACAAGGTGGACCACGTGATCGAGGTCTGCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS CCA 72 bp GTTCACGTTAATGATTTTGGCAGATGGAGGGCAGCGTaGAGTTCTGCAGCACATAGGTGCGGTCCAAGAACA +
Preference number: 6 (lower is better)
Translates to: VHVNDFGRWRAA*SSAAHRCGPRT
Trigger: TGTTCTTGGACCGCACCTATGTGCTGCAGAACTCCACGCTGCCCTCCATCTGCCAAAATCATTAACGTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463426.5
ENST00000488558.2
CDS CAA 72 bp TGGAAGCAGACCTCGATCACGTGGTCCACCTTGTCCTaGAAGTCCAACAGGTCTTGGACCATGTCTTTGTCT +
Preference number: 6 (lower is better)
Translates to: WKQTSITWSTLS*KSNRSWTMSLS
Trigger: AGACAAAGACATGGTCCAAGACCTGTTGGACTTCAAGGACAAGGTGGACCACGTGATCGAGGTCTGCTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS CAA 72 bp TCTTTACCGTGGATAAACCTGAACAGGATCATGATCTaGTCCAACGTCCGCTCCAGCTCCTCGTCTGTGGCT +
Preference number: 6 (lower is better)
Translates to: SLPWINLNRIMI*SNVRSSSSSVA
Trigger: AGCCACAGACGAGGAGCTGGAGCGGACGTTGGACAAGATCATGATCCTGTTCAGGTTTATCCACGGTAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000470067.5
ENST00000617546.4
CDS CAA 72 bp TCCAACGTCCGCTCCAGCTCCTCGTCTGTGGCTTCTTaGTTGCCTGCTCTTAACTTTGAATCCACATGCTTT +
Preference number: 6 (lower is better)
Translates to: SNVRSSSSSVAS*LPALNFESTCF
Trigger: AAAGCATGTGGATTCAAAGTTAAGAGCAGGCAACAAAGAAGCCACAGACGAGGAGCTGGAGCGGACGTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000470067.5
ENST00000617546.4
CDS CAA 90 bp TCATTCTTCTGGAAGCAGACCTCGATCACGTGGTCCACCTTGTCCTaGAAGTCCAACAGGTCTTGGACCATGTCTTTGTCTTTCTCAGGA +
Preference number: 6 (lower is better)
Translates to: SFFWKQTSITWSTLS*KSNRSWTMSLSFSG
Trigger: TCCTGAGAAAGACAAAGACATGGTCCAAGACCTGTTGGACTTCAAGGACAAGGTGGACCACGTGATCGAGGTCTGCTTCCAGAAGAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000617546.4
CDS GCA 72 bp GTCGATGGGACTTTGTTGCCTATCACAGAAAGCCAATaGAGATGGTTCTCTAAACGGAAGGATCTGTGCCTG +
Preference number: 6 (lower is better)
Translates to: VDGTLLPITESQ*RWFSKRKDLCL
Trigger: CAGGCACAGATCCTTCCGTTTAGAGAACCATCTGCATTGGCTTTCTGTGATAGGCAACAAAGTCCCATCGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474116.5
CDS CAA 90 bp ACACGCAACTGTGAACGAGGCTGTGAATACGAAGGTCATCATTCCTaGACTGGGTTACGGGTTACATCATATAAGGCCCTATCTCAGCAG +
Preference number: 6 (lower is better)
Translates to: TRNCERGCEYEGHHS*TGLRVTSYKALSQQ
Trigger: CTGCTGAGATAGGGCCTTATATGATGTAACCCGTAACCCAGTCAAGGAATGATGACCTTCGTATTCACAGCCTCGTTCACAGTTGCGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474116.5
CDS TCA 72 bp GTGAACGAGGCTGTGAATACGAAGGTCATCATTCCTTaGCTGGGTTACGGGTTACATCATATAAGGCCCTAT +
Preference number: 6 (lower is better)
Translates to: VNEAVNTKVIIP*LGYGLHHIRPY
Trigger: ATAGGGCCTTATATGATGTAACCCGTAACCCAGTCAAGGAATGATGACCTTCGTATTCACAGCCTCGTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474116.5
CDS CAA 72 bp TGTGAACGAGGCTGTGAATACGAAGGTCATCATTCCTaGACTGGGTTACGGGTTACATCATATAAGGCCCTA +
Preference number: 6 (lower is better)
Translates to: CERGCEYEGHHS*TGLRVTSYKAL
Trigger: TAGGGCCTTATATGATGTAACCCGTAACCCAGTCAAGGAATGATGACCTTCGTATTCACAGCCTCGTTCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474116.5
CDS TCA 72 bp CATTGTGAGTATGTTCACTGTGAGGTCTATAGGGCCTaGGTCACTCTGATTCTGCATATGCTGCTTGAAATG +
Preference number: 6 (lower is better)
Translates to: HCEYVHCEVYRA*VTLILHMLLEM
Trigger: CATTTCAAGCAGCATATGCAGAATCAGAGTGACTCAGGCCCTATAGACCTCACAGTGAACATACTCACAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000326335.8
ENST00000375440.9
ENST00000375441.7
ENST00000451881.5
ENST00000470067.5
ENST00000617546.4