RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CUL2 (Homo sapiens)

Ensembl gene IDs: ENSG00000108094

Ensembl transcript IDs: ENST00000374746.5, ENST00000374748.5, ENST00000374749.8, ENST00000374751.7, ENST00000374754.8, ENST00000421317.4, ENST00000468804.5, ENST00000478044.1, ENST00000537177.5, ENST00000626172.2, ENST00000673636.1

Found 424 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTaGAGTAGCACACCACCAGAAACTGCTGATGGAATTACATCTTCA +
Preference number: 1 (lower is better)
Translates to: RLEVTKHPAHTLRCL*SSTPPETADGITSS
Trigger: TGAAGATGTAATTCCATCAGCAGTTTCTGGTGGTGTGCTACTCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
3UTR TCA 90 bp GAAGAAAGACAACTTTTGAATGAAAAGCTCTCTCTGTGCCAGACTTaGGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGAG +
Preference number: 1 (lower is better)
Translates to: EERQLLNEKLSLCQT*GHQASCSHSAMSVE
Trigger: CTCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCACAGAGAGAGCTTTTCATTCAAAAGTTGTCTTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
3UTR TCA 90 bp CGATCATTTTTGATTTCTCGGAGCAGCATTCGGATAAGGATGGCCTaGAGTGGTTCAACCATCAATTTCCTCCACATATCCAATGCTAGC +
Preference number: 1 (lower is better)
Translates to: RSFLISRSSIRIRMA*SGSTINFLHISNAS
Trigger: GCTAGCATTGGATATGTGGAGGAAATTGATGGTTGAACCACTTCAGGCCATCCTTATCCGAATGCTGCTCCGAGAAATCAAAAATGATCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374754.8
3UTR CCA 90 bp CATGGATGTGGTTTTGCAGCTCCTGAATCATATGAGGTAAACCAGTaGACACAGCACGGAGTAAGACGTACATATTTGCCATGTCATTTT +
Preference number: 1 (lower is better)
Translates to: HGCGFAAPESYEVNQ*TQHGVRRTYLPCHF
Trigger: AAAATGACATGGCAAATATGTACGTCTTACTCCGTGCTGTGTCCACTGGTTTACCTCATATGATTCAGGAGCTGCAAAACCACATCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374754.8
3UTR TCA 90 bp GCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTTTTGAATaGAAAGCTCTCTCTGTGCCAGACTTGAGGTCACCAAGCATCCTG +
Preference number: 1 (lower is better)
Translates to: ARINGLCNRRKTTFE*KALSVPDLRSPSIL
Trigger: CAGGATGCTTGGTGACCTCAAGTCTGGCACAGAGAGAGCTTTTCATTCAAAAGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
3UTR CCA 90 bp AACATGAACAAAGGAGTTAATAACCCCATGGATTACTTTCTGGTTTaGGTCTTCTCCACCACGATCATTTTTGATTTCTCGGAGCAGCAT +
Preference number: 1 (lower is better)
Translates to: NMNKGVNNPMDYFLV*VFSTTIIFDFSEQH
Trigger: ATGCTGCTCCGAGAAATCAAAAATGATCGTGGTGGAGAAGACCCAAACCAGAAAGTAATCCATGGGGTTATTAACTCCTTTGTTCATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374754.8
3UTR CCA 90 bp GGCAAGAAGAACTGCCATTTGGTATGTTGTAACCATGGCTACATATaGTTTGCCCAAATAGTTCATTTTAACTTCACCTGTACACAGATA +
Preference number: 1 (lower is better)
Translates to: GKKNCHLVCCNHGYI*FAQIVHFNFTCTQI
Trigger: TATCTGTGTACAGGTGAAGTTAAAATGAACTATTTGGGCAAACCATATGTAGCCATGGTTACAACATACCAAATGGCAGTTCTTCTTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374754.8
3UTR-3UTR TCA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGACGGATAAGGATGGCCTaGAGTGGTTCAACCATCAAT +
Preference number: 2 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGRIRMA*SGSTIN
Trigger: ATTGATGGTTGAACCACTTCAGGCCATCCTTATCCG...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374754.8
3UTR-3UTR TCA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGTCTCTGTGCCAGACTTaGGGTCACCAAGCATCCTGC +
Preference number: 2 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSSLCQT*GHQASC
Trigger: GCAGGATGCTTGGTGACCTCAAGTCTGGCACAGAGA...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
3UTR-3UTR TCA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGATCTCTGTGCCAGACTTaGGGTCACCAAGCATCCTGC +
Preference number: 2 (lower is better)
Translates to: HRARVLVYARINGLCNRRSLCQT*GHQASC
Trigger: GCAGGATGCTTGGTGACCTCAAGTCTGGCACAGAGA...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
3UTR-3UTR GCA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGATCCTGCTCACACTCTaGGATGTCTGTGGAGTAGCA +
Preference number: 2 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSILLTL*DVCGVA
Trigger: TGCTACTCCACAGACATCGCAGAGTGTGAGCAGGAT...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
3UTR-3UTR GCA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAGGTCACCAAGCATCCTaGTCACACTCTGCGATGTCT +
Preference number: 2 (lower is better)
Translates to: HRARVLVYARINGLCNRRGHQAS*SHSAMS
Trigger: AGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACC...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
3UTR-3UTR CCA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGACGAAGGCCCTCATCATaGATGTGGTTTTGCAGCTCC +
Preference number: 2 (lower is better)
Translates to: HRARVLVYARINGLCNRRRRPSS*MWFCSS
Trigger: GGAGCTGCAAAACCACATCCATGATGAGGGCCTTCG...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374754.8
3UTR-3UTR CCA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGACTCTGCGATGTCTGTaGAGTAGCACACCACCAGAA +
Preference number: 2 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSTLRCL*SSTPPE
Trigger: TTCTGGTGGTGTGCTACTCCACAGACATCGCAGAGT...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
3UTR-3UTR GCA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGACTGCCGACGCCTGGCTaGGTTCTATGTATTGTTTGT +
Preference number: 2 (lower is better)
Translates to: HRARVLVYARINGLCNRRLPTPG*VLCIVC
Trigger: ACAAACAATACATAGAACGCAGCCAGGCGTCGGCAG...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374754.8
3UTR-3UTR TCA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAGTTGGCATGTTTTCCTaGGTAAGGTTGCTGGTTGCT +
Preference number: 2 (lower is better)
Translates to: HRARVLVYARINGLCNRRVGMFS*VRLLVA
Trigger: AGCAACCAGCAACCTTACTCAGGAAAACATGCCAAC...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374754.8
3UTR-3UTR GCA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTAGTAAGGTTGCTGGTTaGTCGAAGGCCCTCATCATG +
Preference number: 2 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFSKVAG*SKALIM
Trigger: CATGATGAGGGCCTTCGAGCAACCAGCAACCTTACT...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374754.8
3UTR-3UTR CCA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGTATGAGGTAAACCAGTaGACACAGCACGGAGTAAGA +
Preference number: 2 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSYEVNQ*TQHGVR
Trigger: TCTTACTCCGTGCTGTGTCCACTGGTTTACCTCATA...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374754.8
3UTR-3UTR TCA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGAAGCATTCTTTATGCTaGATGCAGTCCTATGCAGTC +
Preference number: 2 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSKHSLC*MQSYAV
Trigger: GACTGCATAGGACTGCATTCAGCATAAAGAATGCTT...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
3UTR-3UTR CCA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGACCATGGATTACTTTCTaGTTTGGGTCTTCTCCACCA +
Preference number: 2 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGPWITF*FGSSPP
Trigger: TGGTGGAGAAGACCCAAACCAGAAAGTAATCCATGG...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374754.8
3UTR-3UTR TCA 90 bp TTATTGTTGAGATCAGCGCTGACACTCATATCTGTATACATCCGATGTAGCTTGGACATGGATAACCCATaGATTAAACGTTTTGCCAGC +
Preference number: 2 (lower is better)
Translates to: LLLRSALTLISVYIRCSLDMDNP*IKRFAS
Trigger: GCTGGCAAAACGTTTAATTCATGGGTTATCCATGTC...CAAGCTACATCGGATGTATACAGATATGAGTGTCAGCGCTGATCTCAACAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374754.8
3UTR-3UTR TCA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGCATTCTTTATGCTaGATGCAGTCCTATGCAGTC +
Preference number: 2 (lower is better)
Translates to: HRARVLVYARINGLCNRRKHSLC*MQSYAV
Trigger: GACTGCATAGGACTGCATTCAGCATAAAGAATGCTT...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
3UTR-3UTR TCA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAACCACCAGAAACTGCTaGTGGAATTACATCTTCAAG +
Preference number: 2 (lower is better)
Translates to: HRARVLVYARINGLCNRRTTRNC*WNYIFK
Trigger: CTTGAAGATGTAATTCCATCAGCAGTTTCTGGTGGT...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
3UTR-3UTR CCA 90 bp TTATTGTTGAGATCAGCGCTGACACTCATATCTGTATACATCCGATGTAGCTTGAAGGATGGCCTGAAGTaGTTCAACCATCAATTTCCT +
Preference number: 2 (lower is better)
Translates to: LLLRSALTLISVYIRCSLKDGLK*FNHQFP
Trigger: AGGAAATTGATGGTTGAACCACTTCAGGCCATCCTT...CAAGCTACATCGGATGTATACAGATATGAGTGTCAGCGCTGATCTCAACAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374754.8
3UTR-3UTR TCA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTCACCACGATCATTTTTaGTTTCTCGGAGCAGCATTC +
Preference number: 2 (lower is better)
Translates to: RVLVYARINGLCNRRKTTHHDHF*FLGAAF
Trigger: GAATGCTGCTCCGAGAAATCAAAAATGATCGTGGTG...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374754.8
3UTR-3UTR TCA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGATCTGTAATTTACAACTaGCGTAAGGGCCTTATCCAA +
Preference number: 2 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGSVIYN*RKGLIQ
Trigger: TTGGATAAGGCCCTTACGTCAGTTGTAAATTACAGA...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374754.8
3UTR-3UTR TCA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGATTTTGTGGTCAACCTaGTACTCCATCCACATAAAA +
Preference number: 2 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSILWST*YSIHIK
Trigger: TTTTATGTGGATGGAGTATCAGGTTGACCACAAAAT...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
3UTR-3UTR TCA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTTTTGAATaGAAAGCTCTCTCTGTGCCA +
Preference number: 2 (lower is better)
Translates to: HRARVLVYARINGLCNRRKTTFE*KALSVP
Trigger: TGGCACAGAGAGAGCTTTTCATTCAAAAGTTGTCTT...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
3UTR-3UTR GCA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAAAGACACATCAACTaGAAACGTGAAGGGGAGAAA +
Preference number: 2 (lower is better)
Translates to: HRARVLVYARINGLCNRRKRHIN*KREGEK
Trigger: TTTCTCCCCTTCACGTTTGCAGTTGATGTGTCTTTT...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
3UTR-3UTR CCA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTGATTACTTTCTGGTTTaGGTCTTCTCCACCACGATC +
Preference number: 2 (lower is better)
Translates to: RVLVYARINGLCNRRKTTDYFLV*VFSTTI
Trigger: GATCGTGGTGGAGAAGACCCAAACCAGAAAGTAATC...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374754.8
3UTR-3UTR TCA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGAACAGTGTTGATAAGCTaGACAAATTTACCATGCACT +
Preference number: 2 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGTVLIS*TNLPCT
Trigger: AGTGCATGGTAAATTTGTTCAGCTTATCAACACTGT...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374754.8
3UTR-3UTR TCA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAATTTTGTGGTCAACCTaGTACTCCATCCACATAAAA +
Preference number: 2 (lower is better)
Translates to: HRARVLVYARINGLCNRRILWST*YSIHIK
Trigger: TTTTATGTGGATGGAGTATCAGGTTGACCACAAAAT...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
3UTR-3UTR GCA 90 bp TTATTGTTGAGATCAGCGCTGACACTCATATCTGTATACATCCGATGTAGCTTGTTTTGCCAGCATTCTTaGGTAGAACTTTTGAAAGAC +
Preference number: 2 (lower is better)
Translates to: LLLRSALTLISVYIRCSLFCQHS*VELLKD
Trigger: GTCTTTCAAAAGTTCTACGCAAGAATGCTGGCAAAA...CAAGCTACATCGGATGTATACAGATATGAGTGTCAGCGCTGATCTCAACAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374754.8
3UTR-3UTR GCA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAATTCTTTATGCTGAATaGAGTCCTATGCAGTCAAGA +
Preference number: 2 (lower is better)
Translates to: HRARVLVYARINGLCNRRILYAE*SPMQSR
Trigger: TCTTGACTGCATAGGACTGCATTCAGCATAAAGAAT...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
3UTR CAA 90 bp TCTATTACTGTGTCTTGGTTTTTGATAAAATTGTTGAACTTATTGTaGAGATCAGCGCTGACACTCATATCTGTATACATCCGATGTAGC +
Preference number: 2 (lower is better)
Translates to: SITVSWFLIKLLNLL*RSALTLISVYIRCS
Trigger: GCTACATCGGATGTATACAGATATGAGTGTCAGCGCTGATCTCAACAATAAGTTCAACAATTTTATCAAAAACCAAGACACAGTAATAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374754.8
3UTR CCA 72 bp GTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTaGAGTAGCACACCACCAGAAACTGCTGATGGAATT +
Preference number: 3 (lower is better)
Translates to: VTKHPAHTLRCL*SSTPPETADGI
Trigger: AATTCCATCAGCAGTTTCTGGTGGTGTGCTACTCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
3UTR TCA 72 bp AATTCCTGGGGAATTGCAAACGTAGATGAAGGAGCCTaGGTAAGAGGCCACGCACCAGCCTGTAGAACATAT +
Preference number: 3 (lower is better)
Translates to: NSWGIANVDEGA*VRGHAPACRTY
Trigger: ATATGTTCTACAGGCTGGTGCGTGGCCTCTTACTCAGGCTCCTTCATCTACGTTTGCAATTCCCCAGGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374754.8
3UTR-3UTR CAA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGCTCTCTGTGCCAGACTaGAGGTCACCAAGCATCCTG +
Preference number: 3 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSLSVPD*RSPSIL
Trigger: CAGGATGCTTGGTGACCTCAAGTCTGGCACAGAGAG...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
3UTR-3UTR CAA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGACTCTCTGTGCCAGACTaGAGGTCACCAAGCATCCTG +
Preference number: 3 (lower is better)
Translates to: HRARVLVYARINGLCNRRLSVPD*RSPSIL
Trigger: CAGGATGCTTGGTGACCTCAAGTCTGGCACAGAGAG...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
3UTR CCA 72 bp TTCTCGGAGCAGCATTCGGATAAGGATGGCCTGAAGTaGTTCAACCATCAATTTCCTCCACATATCCAATGC +
Preference number: 3 (lower is better)
Translates to: FSEQHSDKDGLK*FNHQFPPHIQC
Trigger: GCATTGGATATGTGGAGGAAATTGATGGTTGAACCACTTCAGGCCATCCTTATCCGAATGCTGCTCCGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374754.8
3UTR-3UTR CAA 90 bp GGCAAGAAGAACTGCCATTTGGTATGTTGTAACCATGGCTACATATGGTTTGCCGGATTACTTTCTGGTTaGGGTCTTCTCCACCACGAT +
Preference number: 3 (lower is better)
Translates to: GKKNCHLVCCNHGYIWFAGLLSG*GLLHHD
Trigger: ATCGTGGTGGAGAAGACCCAAACCAGAAAGTAATCC...GGCAAACCATATGTAGCCATGGTTACAACATACCAAATGGCAGTTCTTCTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374754.8
3UTR TCA 72 bp TTGATTTCTCGGAGCAGCATTCGGATAAGGATGGCCTaGAGTGGTTCAACCATCAATTTCCTCCACATATCC +
Preference number: 3 (lower is better)
Translates to: LISRSSIRIRMA*SGSTINFLHIS
Trigger: GGATATGTGGAGGAAATTGATGGTTGAACCACTTCAGGCCATCCTTATCCGAATGCTGCTCCGAGAAATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374754.8
3UTR CCA 72 bp GGTTTTGCAGCTCCTGAATCATATGAGGTAAACCAGTaGACACAGCACGGAGTAAGACGTACATATTTGCCA +
Preference number: 3 (lower is better)
Translates to: GFAAPESYEVNQ*TQHGVRRTYLP
Trigger: TGGCAAATATGTACGTCTTACTCCGTGCTGTGTCCACTGGTTTACCTCATATGATTCAGGAGCTGCAAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374754.8
3UTR-3UTR CAA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGACGAACTATAGCAGCTaGGAGATACATTTTCCGGTC +
Preference number: 3 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSTNYSS*EIHFPV
Trigger: GACCGGAAAATGTATCTCCAAGCTGCTATAGTTCGT...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374754.8
3UTR-3UTR CAA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGCTAGTATCTAAACTGTaGGAGGAGGGTTGTAAGGGT +
Preference number: 3 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSLVSKL*EEGCKG
Trigger: ACCCTTACAACCCTCCTCCAACAGTTTAGATACTAG...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
3UTR-3UTR CAA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAGTCTGCTCCATTTCTaGTGGTGTGTCTTTCTGCAT +
Preference number: 3 (lower is better)
Translates to: HRARVLVYARINGLCNRRSLLHF*WCVFLH
Trigger: ATGCAGAAAGACACACCACAAGAAATGGAGCAGACT...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374754.8
3UTR CCA 72 bp GTTTCACTGTTGTTAAAGGCAAGAAGAACTGCCATTTaGTATGTTGTAACCATGGCTACATATGGTTTGCCC +
Preference number: 3 (lower is better)
Translates to: VSLLLKARRTAI*YVVTMATYGLP
Trigger: GGGCAAACCATATGTAGCCATGGTTACAACATACCAAATGGCAGTTCTTCTTGCCTTTAACAACAGTGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374754.8
3UTR-3UTR CAA 90 bp TGTAACCATGGCTACATATGGTTTGCCCAAATAGTTCATTTTAACTTCACCTGTCCACCACGATCATTTTaGATTTCTCGGAGCAGCATT +
Preference number: 3 (lower is better)
Translates to: CNHGYIWFAQIVHFNFTCPPRSF*ISRSSI
Trigger: AATGCTGCTCCGAGAAATCAAAAATGATCGTGGTGG...ACAGGTGAAGTTAAAATGAACTATTTGGGCAAACCATATGTAGCCATGGTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374754.8
3UTR-3UTR CAA 90 bp TGTAACCATGGCTACATATGGTTTGCCCAAATAGTTCATTTTAACTTCACCTGTAGCAGTTCAGGTGCTTaGCAAACAGACTTAGGTTCT +
Preference number: 3 (lower is better)
Translates to: CNHGYIWFAQIVHFNFTCSSSGA*QTDLGS
Trigger: AGAACCTAAGTCTGTTTGCAAAGCACCTGAACTGCT...ACAGGTGAAGTTAAAATGAACTATTTGGGCAAACCATATGTAGCCATGGTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374754.8
3UTR-3UTR CAA 90 bp TTATTGTTGAGATCAGCGCTGACACTCATATCTGTATACATCCGATGTAGCTTGGTTTTGCCAGCATTCTaGCGTAGAACTTTTGAAAGA +
Preference number: 3 (lower is better)
Translates to: LLLRSALTLISVYIRCSLVLPAF*RRTFER
Trigger: TCTTTCAAAAGTTCTACGCAAGAATGCTGGCAAAAC...CAAGCTACATCGGATGTATACAGATATGAGTGTCAGCGCTGATCTCAACAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374754.8
CDS-3UTR GCA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGAGCGCTGCCATTACTGTaGGCCGAGGCCGCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGALPLL*AEAASP
Trigger: CGGGGAGGCGGCCTCGGCGCACAGTAATGGCAGCGC...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374748.5
ENST00000374754.8
CDS-3UTR GCA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGACCCTGCTCACAGCGCTaGCATTACTGTGCGCCGAGG +
Preference number: 4 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGPCSQR*HYCAPR
Trigger: CCTCGGCGCACAGTAATGGCAGCGCTGTGAGCAGGG...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374748.5
ENST00000374754.8
CDS-3UTR CCA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGATCCTTCGAAGGAAAATaGGGCCGCGGGAGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGSFEGK*GRGRGG
Trigger: GCCGCCTCTCCCGCGGCCCCATTTTCCTTCGAAGGA...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374748.5
ENST00000673636.1
CDS-3UTR CCA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGACTTCTCACACCACGCTaGAGGAGAGCGACATCACGC +
Preference number: 4 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGLLTPR*RRATSR
Trigger: GCGTGATGTCGCTCTCCTCCAGCGTGGTGTGAGAAG...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGATCTCTGTGCCAGACTTaGGGTCACCAAGCATCCTGC +
Preference number: 4 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGSLCQT*GHQASC
Trigger: GCAGGATGCTTGGTGACCTCAAGTCTGGCACAGAGA...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGAGGTCACCAAGCATCCTaGTCACACTCTGCGATGTCT +
Preference number: 4 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGGHQAS*SHSAMS
Trigger: AGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACC...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CCA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGACGAAGGCCCTCATCATaGATGTGGTTTTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGRRPSS*MWFCSS
Trigger: GGAGCTGCAAAACCACATCCATGATGAGGGCCTTCG...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CCA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGAAGTTCCAGACTAGCCTaGGAAACATGGCGAAACCCC +
Preference number: 4 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGSSRLA*ETWRNP
Trigger: GGGGTTTCGCCATGTTTCCCAGGCTAGTCTGGAACT...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR TCA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGCAGCCCGAAGGAGTaGAAGACGAAGCCCCGGCGA +
Preference number: 4 (lower is better)
Translates to: LRLREGHRARVLVYARINGSPKE*KTKPRR
Trigger: TCGCCGGGGCTTCGTCTTTCACTCCTTCGGGCTGCC...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374748.5
ENST00000374749.8
ENST00000374754.8
CDS-3UTR GCA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGAAGTAAGGTTGCTGGTTaGTCGAAGGCCCTCATCATG +
Preference number: 4 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGSKVAG*SKALIM
Trigger: CATGATGAGGGCCTTCGAGCAACCAGCAACCTTACT...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGACTGCCGACGCCTGGCTaGGTTCTATGTATTGTTTGT +
Preference number: 4 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGLPTPG*VLCIVC
Trigger: ACAAACAATACATAGAACGCAGCCAGGCGTCGGCAG...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp GATTTCTCGGAGCAGCATTCGGATAAGGATGGCCTGAAGTGGTTCAACCATCAACAGCTCGCGTTCCCCTaGTCACAGCGCTGCCATTAC +
Preference number: 4 (lower is better)
Translates to: DFSEQHSDKDGLKWFNHQQLAFP*SQRCHY
Trigger: GTAATGGCAGCGCTGTGAGCAGGGGAACGCGAGCTG...TTGATGGTTGAACCACTTCAGGCCATCCTTATCCGAATGCTGCTCCGAGAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374754.8
CDS-3UTR GCA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGACCGGTCCTCATCAACTaGACTTCTAGTCTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGPVLIN*TSSLLH
Trigger: ATGGAGCAGACTAGAAGTGCAGTTGATGAGGACCGG...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000673636.1
CDS-3UTR CCA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGATCATCTGCCGACGCCTaGCTGCGTTCTATGTATTGT +
Preference number: 4 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGSSADA*LRSMYC
Trigger: ACAATACATAGAACGCAGCCAGGCGTCGGCAGATGA...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CCA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATCGGCCAAGATCGGGTTaGGGAGGCCCGGGATCCAGT +
Preference number: 4 (lower is better)
Translates to: LRLREGHRARVLVYARINRPRSG*GGPGSS
Trigger: ACTGGATCCCGGGCCTCCCCAACCCGATCTTGGCCG...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374748.5
ENST00000673636.1
CDS-3UTR TCA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGACGACGTATTCCAACATaGCCACGGCTTTTATTGTCG +
Preference number: 4 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGRRIPT*PRLLLS
Trigger: CGACAATAAAAGCCGTGGTCATGTTGGAATACGTCG...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGAGTTGGCATGTTTTCCTaGGTAAGGTTGCTGGTTGCT +
Preference number: 4 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGVGMFS*VRLLVA
Trigger: AGCAACCAGCAACCTTACTCAGGAAAACATGCCAAC...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGACATCAACTGCAAACGTaGAGGGGAGAAAAAGCATGG +
Preference number: 4 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGHQLQT*RGEKAW
Trigger: CCATGCTTTTTCTCCCCTTCACGTTTGCAGTTGATG...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTGCGCTGCCATTACTGTaGGCCGAGGCCGCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFALPLL*AEAASP
Trigger: CGGGGAGGCGGCCTCGGCGCACAGTAATGGCAGCGC...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374748.5
ENST00000374754.8
CDS-3UTR CCA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGACACTGCTCTTCTCACTaGTCTCCTTGTGTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGHCSSH*SPCVSL
Trigger: AAGAGAGACACAAGGAGACCAGTGAGAAGAGCAGTG...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673636.1
CDS-3UTR TCA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGAAATTGCAAACGTAGATaGAGGAGCCTGAGTAAGAGG +
Preference number: 4 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGNCKRR*RSLSKR
Trigger: CCTCTTACTCAGGCTCCTTCATCTACGTTTGCAATT...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAGGCAGCCCGAAGGAGTaGAAGACGAAGCCCCGGCGA +
Preference number: 4 (lower is better)
Translates to: HRARVLVYARINGLCNRRGSPKE*KTKPRR
Trigger: TCGCCGGGGCTTCGTCTTTCACTCCTTCGGGCTGCC...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374748.5
ENST00000374749.8
ENST00000374754.8
CDS-3UTR GCA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGAGCAGTCCATATAGTCTaGACCCTTGCTGTATTCTTC +
Preference number: 4 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGAVHIV*TLAVFF
Trigger: GAAGAATACAGCAAGGGTGCAGACTATATGGACTGC...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGCTCTGCCTCCGGCTTTaGCCAACACACACCCTCCGG +
Preference number: 4 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSLCLRL*PTHTLR
Trigger: CCGGAGGGTGTGTGTTGGGCAAAGCCGGAGGCAGAG...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374751.7
ENST00000374754.8
ENST00000626172.2
CDS-3UTR GCA 90 bp CTTCATTCTCTGTCATCCCTTTCGCTGACTTCTTCAGTAAGTTGTCACAGTACTCCCTGCTCACAGCGCTaGCATTACTGTGCGCCGAGG +
Preference number: 4 (lower is better)
Translates to: LHSLSSLSLTSSVSCHSTPCSQR*HYCAPR
Trigger: CCTCGGCGCACAGTAATGGCAGCGCTGTGAGCAGGG...AGTACTGTGACAACTTACTGAAGAAGTCAGCGAAAGGGATGACAGAGAATGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374754.8
CDS-3UTR CCA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGAGATTACTTTCTGGTTTaGGTCTTCTCCACCACGATC +
Preference number: 4 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGDYFLV*VFSTTI
Trigger: GATCGTGGTGGAGAAGACCCAAACCAGAAAGTAATC...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CCA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGATATGAGGTAAACCAGTaGACACAGCACGGAGTAAGA +
Preference number: 4 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGYEVNQ*TQHGVR
Trigger: TCTTACTCCGTGCTGTGTCCACTGGTTTACCTCATA...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGAAAGCATTCTTTATGCTaGATGCAGTCCTATGCAGTC +
Preference number: 4 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGKHSLC*MQSYAV
Trigger: GACTGCATAGGACTGCATTCAGCATAAAGAATGCTT...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGAACCACCAGAAACTGCTaGTGGAATTACATCTTCAAG +
Preference number: 4 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGTTRNC*WNYIFK
Trigger: CTTGAAGATGTAATTCCATCAGCAGTTTCTGGTGGT...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGAACGGTCATTCCATGTTaGTCTTTCGACGTATTCCAA +
Preference number: 4 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGTVIPC*SFDVFQ
Trigger: TTGGAATACGTCGAAAGAGCAACATGGAATGACCGT...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGACTCTGCCTCCGGCTTTaGCCAACACACACCCTCCGG +
Preference number: 4 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGLCLRL*PTHTLR
Trigger: CCGGAGGGTGTGTGTTGGGCAAAGCCGGAGGCAGAG...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374751.7
ENST00000374754.8
ENST00000626172.2
CDS-3UTR CCA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGAAAGGATGGCCTGAAGTaGTTCAACCATCAATTTCCT +
Preference number: 4 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGKDGLK*FNHQFP
Trigger: AGGAAATTGATGGTTGAACCACTTCAGGCCATCCTT...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CCA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATCTTCTCACACCACGCTaGAGGAGAGCGACATCACGC +
Preference number: 4 (lower is better)
Translates to: LRLREGHRARVLVYARINLLTPR*RRATSR
Trigger: GCGTGATGTCGCTCTCCTCCAGCGTGGTGTGAGAAG...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGTAGATGAAGGAGCCTaGGTAAGAGGCCACGCACCA +
Preference number: 4 (lower is better)
Translates to: LRLREGHRARVLVYARINVDEGA*VRGHAP
Trigger: TGGTGCGTGGCCTCTTACTCAGGCTCCTTCATCTAC...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTGGCAGCCCGAAGGAGTaGAAGACGAAGCCCCGGCGA +
Preference number: 4 (lower is better)
Translates to: RVLVYARINGLCNRRKTTGSPKE*KTKPRR
Trigger: TCGCCGGGGCTTCGTCTTTCACTCCTTCGGGCTGCC...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374748.5
ENST00000374749.8
ENST00000374754.8
CDS-3UTR TCA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGACCTAAGCCAAAAAGTTaGCCATGTTACTCTGTACAT +
Preference number: 4 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGPKPKS*PCYSVH
Trigger: ATGTACAGAGTAACATGGTCAACTTTTTGGCTTAGG...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537177.5
CDS-3UTR GCA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGAAAAAGACACATCAACTaGAAACGTGAAGGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGKRHIN*KREGEK
Trigger: TTTCTCCCCTTCACGTTTGCAGTTGATGTGTCTTTT...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp GATTTCTCGGAGCAGCATTCGGATAAGGATGGCCTGAAGTGGTTCAACCATCAAATCCTGCTCACACTCTaGGATGTCTGTGGAGTAGCA +
Preference number: 4 (lower is better)
Translates to: DFSEQHSDKDGLKWFNHQILLTL*DVCGVA
Trigger: TGCTACTCCACAGACATCGCAGAGTGTGAGCAGGAT...TTGATGGTTGAACCACTTCAGGCCATCCTTATCCGAATGCTGCTCCGAGAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374754.8
CDS-3UTR GCA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGACAGCTCGCGTTCCCCTaGTCACAGCGCTGCCATTAC +
Preference number: 4 (lower is better)
Translates to: HRARVLVYARINGLCNRRQLAFP*SQRCHY
Trigger: GTAATGGCAGCGCTGTGAGCAGGGGAACGCGAGCTG...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374748.5
ENST00000374749.8
ENST00000374754.8
CDS-3UTR GCA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTGGGTCAGCGCTCTTCTaGAGAAGCAGGGCAAGGGGC +
Preference number: 4 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFGSALF*RSRARG
Trigger: GCCCCTTGCCCTGCTTCTGCAGAAGAGCGCTGACCC...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374748.5
ENST00000673636.1
CDS-3UTR CCA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGAAGAAGAACTGCCATTTaGTATGTTGTAACCATGGCT +
Preference number: 4 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGRRTAI*YVVTMA
Trigger: AGCCATGGTTACAACATACCAAATGGCAGTTCTTCT...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CCA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTATCCAGTCCAGGGGGTaGCAGGGCTTACGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFIQSRG*QGLRVS
Trigger: GCTGACCCGTAAGCCCTGCCACCCCCTGGACTGGAT...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374748.5
ENST00000673636.1
CDS-3UTR CCA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTCGGCCAAGATCGGGTTaGGGAGGCCCGGGATCCAGT +
Preference number: 4 (lower is better)
Translates to: RVLVYARINGLCNRRKTTRPRSG*GGPGSS
Trigger: ACTGGATCCCGGGCCTCCCCAACCCGATCTTGGCCG...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374748.5
ENST00000673636.1
CDS-3UTR TCA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGAACAGTGTTGATAAGCTaGACAAATTTACCATGCACT +
Preference number: 4 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGTVLIS*TNLPCT
Trigger: AGTGCATGGTAAATTTGTTCAGCTTATCAACACTGT...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGGTAGATGAAGGAGCCTaGGTAAGAGGCCACGCACCA +
Preference number: 4 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSVDEGA*VRGHAP
Trigger: TGGTGCGTGGCCTCTTACTCAGGCTCCTTCATCTAC...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR TCA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGAATTTTGTGGTCAACCTaGTACTCCATCCACATAAAA +
Preference number: 4 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGILWST*YSIHIK
Trigger: TTTTATGTGGATGGAGTATCAGGTTGACCACAAAAT...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGATTTTGCCAGCATTCTTaGGTAGAACTTTTGAAAGAC +
Preference number: 4 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGFCQHS*VELLKD
Trigger: GTCTTTCAAAAGTTCTACGCAAGAATGCTGGCAAAA...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGAAAAGGCAAGAAGAACTaGCATTTGGTATGTTGTAAC +
Preference number: 4 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGKGKKN*HLVCCN
Trigger: GTTACAACATACCAAATGGCAGTTCTTCTTGCCTTT...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGTCACCAAGCATCCTaGTCACACTCTGCGATGTCT +
Preference number: 4 (lower is better)
Translates to: LRLREGHRARVLVYARINGHQAS*SHSAMS
Trigger: AGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACC...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTCAGCTCGCGTTCCCCTaGTCACAGCGCTGCCATTAC +
Preference number: 4 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFQLAFP*SQRCHY
Trigger: GTAATGGCAGCGCTGTGAGCAGGGGAACGCGAGCTG...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374748.5
ENST00000374749.8
ENST00000374754.8
CDS-3UTR GCA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTCTCTGCCTCCGGCTTTaGCCAACACACACCCTCCGG +
Preference number: 4 (lower is better)
Translates to: RVLVYARINGLCNRRKTTLCLRL*PTHTLR
Trigger: CCGGAGGGTGTGTGTTGGGCAAAGCCGGAGGCAGAG...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374751.7
ENST00000374754.8
ENST00000626172.2
CDS-3UTR CCA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATCGAAGGCCCTCATCATaGATGTGGTTTTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LRLREGHRARVLVYARINRRPSS*MWFCSS
Trigger: GGAGCTGCAAAACCACATCCATGATGAGGGCCTTCG...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CCA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGACTTCTCACACCACGCTaGAGGAGAGCGACATCACGC +
Preference number: 4 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGLLTPR*RRATSR
Trigger: GCGTGATGTCGCTCTCCTCCAGCGTGGTGTGAGAAG...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CCA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGAGTGGTGGTGATGGTGTaGATAGACAATAAATATGAT +
Preference number: 4 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGVVVMV*IDNKYD
Trigger: ATCATATTTATTGTCTATCCACACCATCACCACCAC...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR CCA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATAGTTCCAGACTAGCCTaGGAAACATGGCGAAACCCC +
Preference number: 4 (lower is better)
Translates to: LRLREGHRARVLVYARINSSRLA*ETWRNP
Trigger: GGGGTTTCGCCATGTTTCCCAGGCTAGTCTGGAACT...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR CCA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTTCCTTCGAAGGAAAATaGGGCCGCGGGAGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: RVLVYARINGLCNRRKTTSFEGK*GRGRGG
Trigger: GCCGCCTCTCCCGCGGCCCCATTTTCCTTCGAAGGA...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374748.5
ENST00000673636.1
CDS-3UTR CCA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGGGCTCAACTGCAACATaGCACCCAAGCTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSGSTAT*HPSFLS
Trigger: GGAGAGGAAGCTTGGGTGCCATGTTGCAGTTGAGCC...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537177.5
CDS-3UTR TCA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGAGTAGATGAAGGAGCCTaGGTAAGAGGCCACGCACCA +
Preference number: 4 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGVDEGA*VRGHAP
Trigger: TGGTGCGTGGCCTCTTACTCAGGCTCCTTCATCTAC...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAGTAGATGAAGGAGCCTaGGTAAGAGGCCACGCACCA +
Preference number: 4 (lower is better)
Translates to: HRARVLVYARINGLCNRRVDEGA*VRGHAP
Trigger: TGGTGCGTGGCCTCTTACTCAGGCTCCTTCATCTAC...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGATCTCTGTGCCAGACTTaGGGTCACCAAGCATCCTGC +
Preference number: 4 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGSLCQT*GHQASC
Trigger: GCAGGATGCTTGGTGACCTCAAGTCTGGCACAGAGA...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATAGTAAGGTTGCTGGTTaGTCGAAGGCCCTCATCATG +
Preference number: 4 (lower is better)
Translates to: LRLREGHRARVLVYARINSKVAG*SKALIM
Trigger: CATGATGAGGGCCTTCGAGCAACCAGCAACCTTACT...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATCTGCCGACGCCTGGCTaGGTTCTATGTATTGTTTGT +
Preference number: 4 (lower is better)
Translates to: LRLREGHRARVLVYARINLPTPG*VLCIVC
Trigger: ACAAACAATACATAGAACGCAGCCAGGCGTCGGCAG...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATATCCTGCTCACACTCTaGGATGTCTGTGGAGTAGCA +
Preference number: 4 (lower is better)
Translates to: LRLREGHRARVLVYARINILLTL*DVCGVA
Trigger: TGCTACTCCACAGACATCGCAGAGTGTGAGCAGGAT...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGAGTTTCAAAGACATTGTaGAAGTGTAGTGTTGAAATC +
Preference number: 4 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGVSKTL*KCSVEI
Trigger: GATTTCAACACTACACTTGCACAATGTCTTTGAAAC...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATCCGGTCCTCATCAACTaGACTTCTAGTCTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: LRLREGHRARVLVYARINPVLIN*TSSLLH
Trigger: ATGGAGCAGACTAGAAGTGCAGTTGATGAGGACCGG...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000673636.1
CDS-3UTR GCA 90 bp TTATTGTTGAGATCAGCGCTGACACTCATATCTGTATACATCCGATGTAGCTTGACAATCGTCCTCCTCTaGCTCCGGCTTTGCCCAACA +
Preference number: 4 (lower is better)
Translates to: LLLRSALTLISVYIRCSLTIVLL*LRLCPT
Trigger: TGTTGGGCAAAGCCGGAGGCAGAGGAGGACGATTGT...CAAGCTACATCGGATGTATACAGATATGAGTGTCAGCGCTGATCTCAACAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374754.8
CDS-3UTR CCA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGCGAAGGCCCTCATCATaGATGTGGTTTTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSRRPSS*MWFCSS
Trigger: GGAGCTGCAAAACCACATCCATGATGAGGGCCTTCG...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR CCA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATTCATCTGCCGACGCCTaGCTGCGTTCTATGTATTGT +
Preference number: 4 (lower is better)
Translates to: LRLREGHRARVLVYARINSSADA*LRSMYC
Trigger: ACAATACATAGAACGCAGCCAGGCGTCGGCAGATGA...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CCA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTCTTCTCACACCACGCTaGAGGAGAGCGACATCACGC +
Preference number: 4 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFLLTPR*RRATSR
Trigger: GCGTGATGTCGCTCTCCTCCAGCGTGGTGTGAGAAG...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CCA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATACTCTGCGATGTCTGTaGAGTAGCACACCACCAGAA +
Preference number: 4 (lower is better)
Translates to: LRLREGHRARVLVYARINTLRCL*SSTPPE
Trigger: TTCTGGTGGTGTGCTACTCCACAGACATCGCAGAGT...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CCA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGAGTTCCAGACTAGCCTaGGAAACATGGCGAAACCCC +
Preference number: 4 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSSSRLA*ETWRNP
Trigger: GGGGTTTCGCCATGTTTCCCAGGCTAGTCTGGAACT...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR TCA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATCGGATAAGGATGGCCTaGAGTGGTTCAACCATCAAT +
Preference number: 4 (lower is better)
Translates to: LRLREGHRARVLVYARINRIRMA*SGSTIN
Trigger: ATTGATGGTTGAACCACTTCAGGCCATCCTTATCCG...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTGTAGATGAAGGAGCCTaGGTAAGAGGCCACGCACCA +
Preference number: 4 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFVDEGA*VRGHAP
Trigger: TGGTGCGTGGCCTCTTACTCAGGCTCCTTCATCTAC...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATCATCAACTGCAAACGTaGAGGGGAGAAAAAGCATGG +
Preference number: 4 (lower is better)
Translates to: LRLREGHRARVLVYARINHQLQT*RGEKAW
Trigger: CCATGCTTTTTCTCCCCTTCACGTTTGCAGTTGATG...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp GAGTTAATAACCCCATGGATTACTTTCTGGTTTGGGTCTTCTCCACCACGATCACATCAACTGCAAACGTaGAGGGGAGAAAAAGCATGG +
Preference number: 4 (lower is better)
Translates to: ELITPWITFWFGSSPPRSHQLQT*RGEKAW
Trigger: CCATGCTTTTTCTCCCCTTCACGTTTGCAGTTGATG...TGATCGTGGTGGAGAAGACCCAAACCAGAAAGTAATCCATGGGGTTATTAACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374754.8
CDS-3UTR TCA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTTCTCTGTGCCAGACTTaGGGTCACCAAGCATCCTGC +
Preference number: 4 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFSLCQT*GHQASC
Trigger: GCAGGATGCTTGGTGACCTCAAGTCTGGCACAGAGA...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGAGGTCACCAAGCATCCTaGTCACACTCTGCGATGTCT +
Preference number: 4 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGGHQAS*SHSAMS
Trigger: AGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACC...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGAGTGTTGAAATCTTCTaGAGAAGCAGGGCAAGGGGC +
Preference number: 4 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSSVEIF*RSRARG
Trigger: GCCCCTTGCCCTGCTTCTGCAGAAGATTTCAACACT...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374749.8
ENST00000374754.8
CDS-3UTR GCA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTACAATCGTCCTCCTCTaGCTCCGGCTTTGCCCAACA +
Preference number: 4 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFTIVLL*LRLCPT
Trigger: TGTTGGGCAAAGCCGGAGGCAGAGGAGGACGATTGT...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374751.7
ENST00000374754.8
ENST00000626172.2
CDS-3UTR GCA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGCAGTTTGGGCTCAACTaGAACATGGCACCCAAGCTT +
Preference number: 4 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSQFGLN*NMAPKL
Trigger: AAGCTTGGGTGCCATGTTGCAGTTGAGCCCAAACTG...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537177.5
CDS-3UTR CCA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGACGAAGGCCCTCATCATaGATGTGGTTTTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGRRPSS*MWFCSS
Trigger: GGAGCTGCAAAACCACATCCATGATGAGGGCCTTCG...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CCA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGTCATCTGCCGACGCCTaGCTGCGTTCTATGTATTGT +
Preference number: 4 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSSSADA*LRSMYC
Trigger: ACAATACATAGAACGCAGCCAGGCGTCGGCAGATGA...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR CCA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTCTTCTCACACCACGCTaGAGGAGAGCGACATCACGC +
Preference number: 4 (lower is better)
Translates to: RVLVYARINGLCNRRKTTLLTPR*RRATSR
Trigger: GCGTGATGTCGCTCTCCTCCAGCGTGGTGTGAGAAG...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CCA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGAAGTTCCAGACTAGCCTaGGAAACATGGCGAAACCCC +
Preference number: 4 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGSSRLA*ETWRNP
Trigger: GGGGTTTCGCCATGTTTCCCAGGCTAGTCTGGAACT...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR TCA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGCGACGTATTCCAACATaGCCACGGCTTTTATTGTCG +
Preference number: 4 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSRRIPT*PRLLLS
Trigger: CGACAATAAAAGCCGTGGTCATGTTGGAATACGTCG...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR TCA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATCACCACGATCATTTTTaGTTTCTCGGAGCAGCATTC +
Preference number: 4 (lower is better)
Translates to: LRLREGHRARVLVYARINHHDHF*FLGAAF
Trigger: GAATGCTGCTCCGAGAAATCAAAAATGATCGTGGTG...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp GATTTCTCGGAGCAGCATTCGGATAAGGATGGCCTGAAGTGGTTCAACCATCAATCTGTAATTTACAACTaGCGTAAGGGCCTTATCCAA +
Preference number: 4 (lower is better)
Translates to: DFSEQHSDKDGLKWFNHQSVIYN*RKGLIQ
Trigger: TTGGATAAGGCCCTTACGTCAGTTGTAAATTACAGA...TTGATGGTTGAACCACTTCAGGCCATCCTTATCCGAATGCTGCTCCGAGAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374754.8
CDS-3UTR TCA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATAATTGCAAACGTAGATaGAGGAGCCTGAGTAAGAGG +
Preference number: 4 (lower is better)
Translates to: LRLREGHRARVLVYARINNCKRR*RSLSKR
Trigger: CCTCTTACTCAGGCTCCTTCATCTACGTTTGCAATT...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTTCTCTGTGCCAGACTTaGGGTCACCAAGCATCCTGC +
Preference number: 4 (lower is better)
Translates to: RVLVYARINGLCNRRKTTSLCQT*GHQASC
Trigger: GCAGGATGCTTGGTGACCTCAAGTCTGGCACAGAGA...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGACTGCCGACGCCTGGCTaGGTTCTATGTATTGTTTGT +
Preference number: 4 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGLPTPG*VLCIVC
Trigger: ACAAACAATACATAGAACGCAGCCAGGCGTCGGCAG...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGAATCCTGCTCACACTCTaGGATGTCTGTGGAGTAGCA +
Preference number: 4 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGILLTL*DVCGVA
Trigger: TGCTACTCCACAGACATCGCAGAGTGTGAGCAGGAT...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAATCCTGCTCACACTCTaGGATGTCTGTGGAGTAGCA +
Preference number: 4 (lower is better)
Translates to: HRARVLVYARINGLCNRRILLTL*DVCGVA
Trigger: TGCTACTCCACAGACATCGCAGAGTGTGAGCAGGAT...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTGGTCACCAAGCATCCTaGTCACACTCTGCGATGTCT +
Preference number: 4 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFGHQAS*SHSAMS
Trigger: AGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACC...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGAAGTGTTGAAATCTTCTaGAGAAGCAGGGCAAGGGGC +
Preference number: 4 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGSVEIF*RSRARG
Trigger: GCCCCTTGCCCTGCTTCTGCAGAAGATTTCAACACT...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374749.8
ENST00000374754.8
CDS-3UTR GCA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGACCGGTCCTCATCAACTaGACTTCTAGTCTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: HRARVLVYARINGLCNRRPVLIN*TSSLLH
Trigger: ATGGAGCAGACTAGAAGTGCAGTTGATGAGGACCGG...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000673636.1
CDS-3UTR GCA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGACCGGTCCTCATCAACTaGACTTCTAGTCTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGPVLIN*TSSLLH
Trigger: ATGGAGCAGACTAGAAGTGCAGTTGATGAGGACCGG...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000673636.1
CDS-3UTR GCA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTACAATCGTCCTCCTCTaGCTCCGGCTTTGCCCAACA +
Preference number: 4 (lower is better)
Translates to: RVLVYARINGLCNRRKTTTIVLL*LRLCPT
Trigger: TGTTGGGCAAAGCCGGAGGCAGAGGAGGACGATTGT...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374751.7
ENST00000374754.8
ENST00000626172.2
CDS-3UTR GCA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTACCCTCCACAGCCACTaGTCTTCTCACTGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: RVLVYARINGLCNRRKTTTLHSH*SSHWSP
Trigger: AGGAGACCAGTGAGAAGAGCAGTGGCTGTGGAGGGT...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673636.1
CDS-3UTR CCA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATCCATGGATTACTTTCTaGTTTGGGTCTTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: LRLREGHRARVLVYARINPWITF*FGSSPP
Trigger: TGGTGGAGAAGACCCAAACCAGAAAGTAATCCATGG...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CCA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTCGAAGGCCCTCATCATaGATGTGGTTTTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFRRPSS*MWFCSS
Trigger: GGAGCTGCAAAACCACATCCATGATGAGGGCCTTCG...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CCA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGATCATCTGCCGACGCCTaGCTGCGTTCTATGTATTGT +
Preference number: 4 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGSSADA*LRSMYC
Trigger: ACAATACATAGAACGCAGCCAGGCGTCGGCAGATGA...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CCA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGATCATCTGCCGACGCCTaGCTGCGTTCTATGTATTGT +
Preference number: 4 (lower is better)
Translates to: HRARVLVYARINGLCNRRSSADA*LRSMYC
Trigger: ACAATACATAGAACGCAGCCAGGCGTCGGCAGATGA...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CCA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAACTCTGCGATGTCTGTaGAGTAGCACACCACCAGAA +
Preference number: 4 (lower is better)
Translates to: HRARVLVYARINGLCNRRTLRCL*SSTPPE
Trigger: TTCTGGTGGTGTGCTACTCCACAGACATCGCAGAGT...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CCA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTAGTTCCAGACTAGCCTaGGAAACATGGCGAAACCCC +
Preference number: 4 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFSSRLA*ETWRNP
Trigger: GGGGTTTCGCCATGTTTCCCAGGCTAGTCTGGAACT...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR CCA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATCGAACTATAGCAGCTTaGAGATACATTTTCCGGTCC +
Preference number: 4 (lower is better)
Translates to: LRLREGHRARVLVYARINRTIAA*RYIFRS
Trigger: GGACCGGAAAATGTATCTCCAAGCTGCTATAGTTCG...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000673636.1
CDS-3UTR TCA 90 bp TTATTGTTGAGATCAGCGCTGACACTCATATCTGTATACATCCGATGTAGCTTGCGACGTATTCCAACATaGCCACGGCTTTTATTGTCG +
Preference number: 4 (lower is better)
Translates to: LLLRSALTLISVYIRCSLRRIPT*PRLLLS
Trigger: CGACAATAAAAGCCGTGGTCATGTTGGAATACGTCG...CAAGCTACATCGGATGTATACAGATATGAGTGTCAGCGCTGATCTCAACAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374754.8
CDS-3UTR TCA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGACGGATAAGGATGGCCTaGAGTGGTTCAACCATCAAT +
Preference number: 4 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGRIRMA*SGSTIN
Trigger: ATTGATGGTTGAACCACTTCAGGCCATCCTTATCCG...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGCACCACGATCATTTTTaGTTTCTCGGAGCAGCATTC +
Preference number: 4 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSHHDHF*FLGAAF
Trigger: GAATGCTGCTCCGAGAAATCAAAAATGATCGTGGTG...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR TCA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGAGTTGGCATGTTTTCCTaGGTAAGGTTGCTGGTTGCT +
Preference number: 4 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGVGMFS*VRLLVA
Trigger: AGCAACCAGCAACCTTACTCAGGAAAACATGCCAAC...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGAATTGCAAACGTAGATaGAGGAGCCTGAGTAAGAGG +
Preference number: 4 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSNCKRR*RSLSKR
Trigger: CCTCTTACTCAGGCTCCTTCATCTACGTTTGCAATT...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR TCA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGACATCAACTGCAAACGTaGAGGGGAGAAAAAGCATGG +
Preference number: 4 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGHQLQT*RGEKAW
Trigger: CCATGCTTTTTCTCCCCTTCACGTTTGCAGTTGATG...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATACCACCAGAAACTGCTaGTGGAATTACATCTTCAAG +
Preference number: 4 (lower is better)
Translates to: LRLREGHRARVLVYARINTTRNC*WNYIFK
Trigger: CTTGAAGATGTAATTCCATCAGCAGTTTCTGGTGGT...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGTATAGTCTGCACCCTTaGTGTATTCTTCCCAGTACC +
Preference number: 4 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSYSLHP*CILPST
Trigger: GGTACTGGGAAGAATACAGCAAGGGTGCAGACTATA...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR GCA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGGCAGTCCATATAGTCTaGACCCTTGCTGTATTCTTC +
Preference number: 4 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSAVHIV*TLAVFF
Trigger: GAAGAATACAGCAAGGGTGCAGACTATATGGACTGC...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR GCA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTCTGCCGACGCCTGGCTaGGTTCTATGTATTGTTTGT +
Preference number: 4 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFLPTPG*VLCIVC
Trigger: ACAAACAATACATAGAACGCAGCCAGGCGTCGGCAG...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTATCCTGCTCACACTCTaGGATGTCTGTGGAGTAGCA +
Preference number: 4 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFILLTL*DVCGVA
Trigger: TGCTACTCCACAGACATCGCAGAGTGTGAGCAGGAT...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTGGTCACCAAGCATCCTaGTCACACTCTGCGATGTCT +
Preference number: 4 (lower is better)
Translates to: RVLVYARINGLCNRRKTTGHQAS*SHSAMS
Trigger: AGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACC...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGACTGCACTTCTAGTCTaGTCCATTTCTTGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSTALLV*SISCGV
Trigger: CACACCACAAGAAATGGAGCAGACTAGAAGTGCAGT...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
CDS-3UTR GCA 90 bp CTTCATTCTCTGTCATCCCTTTCGCTGACTTCTTCAGTAAGTTGTCACAGTACTACTGCACTTCTAGTCTaGTCCATTTCTTGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: LHSLSSLSLTSSVSCHSTTALLV*SISCGV
Trigger: CACACCACAAGAAATGGAGCAGACTAGAAGTGCAGT...AGTACTGTGACAACTTACTGAAGAAGTCAGCGAAAGGGATGACAGAGAATGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374754.8
CDS-3UTR GCA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTCCGGTCCTCATCAACTaGACTTCTAGTCTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFPVLIN*TSSLLH
Trigger: ATGGAGCAGACTAGAAGTGCAGTTGATGAGGACCGG...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000673636.1
CDS-3UTR CCA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATAAGGATGGCCTGAAGTaGTTCAACCATCAATTTCCT +
Preference number: 4 (lower is better)
Translates to: LRLREGHRARVLVYARINKDGLK*FNHQFP
Trigger: AGGAAATTGATGGTTGAACCACTTCAGGCCATCCTT...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CCA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGAACCTAGCTCTTGACTaGCTAATCACTTGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSNLALD*LITCGV
Trigger: CACACCACAAGTGATTAGCCAGTCAAGAGCTAGGTT...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374746.5
ENST00000626172.2
CDS-3UTR CCA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTTCATCTGCCGACGCCTaGCTGCGTTCTATGTATTGT +
Preference number: 4 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFSSADA*LRSMYC
Trigger: ACAATACATAGAACGCAGCCAGGCGTCGGCAGATGA...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CCA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTACTCTGCGATGTCTGTaGAGTAGCACACCACCAGAA +
Preference number: 4 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFTLRCL*SSTPPE
Trigger: TTCTGGTGGTGTGCTACTCCACAGACATCGCAGAGT...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CCA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGGTAATCCCAGCACTTTaGGAGACAGAGATAGGATTG +
Preference number: 4 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSVIPAL*ETEIGL
Trigger: CAATCCTATCTCTGTCTCCCAAAGTGCTGGGATTAC...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR TCA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTCGACGTATTCCAACATaGCCACGGCTTTTATTGTCG +
Preference number: 4 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFRRIPT*PRLLLS
Trigger: CGACAATAAAAGCCGTGGTCATGTTGGAATACGTCG...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTCGGATAAGGATGGCCTaGAGTGGTTCAACCATCAAT +
Preference number: 4 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFRIRMA*SGSTIN
Trigger: ATTGATGGTTGAACCACTTCAGGCCATCCTTATCCG...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGACACCACGATCATTTTTaGTTTCTCGGAGCAGCATTC +
Preference number: 4 (lower is better)
Translates to: HRARVLVYARINGLCNRRHHDHF*FLGAAF
Trigger: GAATGCTGCTCCGAGAAATCAAAAATGATCGTGGTG...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTGTTGGCATGTTTTCCTaGGTAAGGTTGCTGGTTGCT +
Preference number: 4 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFVGMFS*VRLLVA
Trigger: AGCAACCAGCAACCTTACTCAGGAAAACATGCCAAC...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATTCTGTAATTTACAACTaGCGTAAGGGCCTTATCCAA +
Preference number: 4 (lower is better)
Translates to: LRLREGHRARVLVYARINSVIYN*RKGLIQ
Trigger: TTGGATAAGGCCCTTACGTCAGTTGTAAATTACAGA...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp CTTCATTCTCTGTCATCCCTTTCGCTGACTTCTTCAGTAAGTTGTCACAGTACTGACATGGATAACCCATaGATTAAACGTTTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: LHSLSSLSLTSSVSCHSTDMDNP*IKRFAS
Trigger: GCTGGCAAAACGTTTAATTCATGGGTTATCCATGTC...AGTACTGTGACAACTTACTGAAGAAGTCAGCGAAAGGGATGACAGAGAATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374754.8
CDS-3UTR TCA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAATTGCAAACGTAGATaGAGGAGCCTGAGTAAGAGG +
Preference number: 4 (lower is better)
Translates to: HRARVLVYARINGLCNRRNCKRR*RSLSKR
Trigger: CCTCTTACTCAGGCTCCTTCATCTACGTTTGCAATT...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTCATCAACTGCAAACGTaGAGGGGAGAAAAAGCATGG +
Preference number: 4 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFHQLQT*RGEKAW
Trigger: CCATGCTTTTTCTCCCCTTCACGTTTGCAGTTGATG...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATAAGACAACTTTTGAATaGAAAGCTCTCTCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: LRLREGHRARVLVYARINKTTFE*KALSVP
Trigger: TGGCACAGAGAGAGCTTTTCATTCAAAAGTTGTCTT...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGACGGTCATTCCATGTTaGTCTTTCGACGTATTCCAA +
Preference number: 4 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSTVIPC*SFDVFQ
Trigger: TTGGAATACGTCGAAAGAGCAACATGGAATGACCGT...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR GCA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAGCAGTCCATATAGTCTaGACCCTTGCTGTATTCTTC +
Preference number: 4 (lower is better)
Translates to: HRARVLVYARINGLCNRRAVHIV*TLAVFF
Trigger: GAAGAATACAGCAAGGGTGCAGACTATATGGACTGC...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp TTATTGTTGAGATCAGCGCTGACACTCATATCTGTATACATCCGATGTAGCTTGGCAGTCCATATAGTCTaGACCCTTGCTGTATTCTTC +
Preference number: 4 (lower is better)
Translates to: LLLRSALTLISVYIRCSLAVHIV*TLAVFF
Trigger: GAAGAATACAGCAAGGGTGCAGACTATATGGACTGC...CAAGCTACATCGGATGTATACAGATATGAGTGTCAGCGCTGATCTCAACAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374754.8
CDS-3UTR GCA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGAGCAGTCCATATAGTCTaGACCCTTGCTGTATTCTTC +
Preference number: 4 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGAVHIV*TLAVFF
Trigger: GAAGAATACAGCAAGGGTGCAGACTATATGGACTGC...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTAGTAAGGTTGCTGGTTaGTCGAAGGCCCTCATCATG +
Preference number: 4 (lower is better)
Translates to: RVLVYARINGLCNRRKTTSKVAG*SKALIM
Trigger: CATGATGAGGGCCTTCGAGCAACCAGCAACCTTACT...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTCTGCCGACGCCTGGCTaGGTTCTATGTATTGTTTGT +
Preference number: 4 (lower is better)
Translates to: RVLVYARINGLCNRRKTTLPTPG*VLCIVC
Trigger: ACAAACAATACATAGAACGCAGCCAGGCGTCGGCAG...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATAAAAGACACATCAACTaGAAACGTGAAGGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: LRLREGHRARVLVYARINKRHIN*KREGEK
Trigger: TTTCTCCCCTTCACGTTTGCAGTTGATGTGTCTTTT...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTATCCTGCTCACACTCTaGGATGTCTGTGGAGTAGCA +
Preference number: 4 (lower is better)
Translates to: RVLVYARINGLCNRRKTTILLTL*DVCGVA
Trigger: TGCTACTCCACAGACATCGCAGAGTGTGAGCAGGAT...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAACTGCACTTCTAGTCTaGTCCATTTCTTGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: HRARVLVYARINGLCNRRTALLV*SISCGV
Trigger: CACACCACAAGAAATGGAGCAGACTAGAAGTGCAGT...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000673636.1
CDS-3UTR GCA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTCCGGTCCTCATCAACTaGACTTCTAGTCTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: RVLVYARINGLCNRRKTTPVLIN*TSSLLH
Trigger: ATGGAGCAGACTAGAAGTGCAGTTGATGAGGACCGG...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000673636.1
CDS-3UTR GCA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGAAGTGTTGAAATTCCTTaGCAGGCACCATTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGSVEIP*QAPFQA
Trigger: AGCTTGGAATGGTGCCTGGCAAGGAATTTCAACACT...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537177.5
CDS-3UTR CCA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGACCATGGATTACTTTCTaGTTTGGGTCTTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: HRARVLVYARINGLCNRRPWITF*FGSSPP
Trigger: TGGTGGAGAAGACCCAAACCAGAAAGTAATCCATGG...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CCA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGATATGAGGTAAACCAGTaGACACAGCACGGAGTAAGA +
Preference number: 4 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGYEVNQ*TQHGVR
Trigger: TCTTACTCCGTGCTGTGTCCACTGGTTTACCTCATA...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CCA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAGTAATCCCAGCACTTTaGGAGACAGAGATAGGATTG +
Preference number: 4 (lower is better)
Translates to: HRARVLVYARINGLCNRRVIPAL*ETEIGL
Trigger: CAATCCTATCTCTGTCTCCCAAAGTGCTGGGATTAC...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR CCA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGAGTAATCCCAGCACTTTaGGAGACAGAGATAGGATTG +
Preference number: 4 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGVIPAL*ETEIGL
Trigger: CAATCCTATCTCTGTCTCCCAAAGTGCTGGGATTAC...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR CCA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGACGAACTATAGCAGCTTaGAGATACATTTTCCGGTCC +
Preference number: 4 (lower is better)
Translates to: HRARVLVYARINGLCNRRRTIAA*RYIFRS
Trigger: GGACCGGAAAATGTATCTCCAAGCTGCTATAGTTCG...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000673636.1
CDS-3UTR TCA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTCGACGTATTCCAACATaGCCACGGCTTTTATTGTCG +
Preference number: 4 (lower is better)
Translates to: RVLVYARINGLCNRRKTTRRIPT*PRLLLS
Trigger: CGACAATAAAAGCCGTGGTCATGTTGGAATACGTCG...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp TGTAACCATGGCTACATATGGTTTGCCCAAATAGTTCATTTTAACTTCACCTGTCGGATAAGGATGGCCTaGAGTGGTTCAACCATCAAT +
Preference number: 4 (lower is better)
Translates to: CNHGYIWFAQIVHFNFTCRIRMA*SGSTIN
Trigger: ATTGATGGTTGAACCACTTCAGGCCATCCTTATCCG...ACAGGTGAAGTTAAAATGAACTATTTGGGCAAACCATATGTAGCCATGGTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374754.8
CDS-3UTR TCA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTCGGATAAGGATGGCCTaGAGTGGTTCAACCATCAAT +
Preference number: 4 (lower is better)
Translates to: RVLVYARINGLCNRRKTTRIRMA*SGSTIN
Trigger: ATTGATGGTTGAACCACTTCAGGCCATCCTTATCCG...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATACAGTGTTGATAAGCTaGACAAATTTACCATGCACT +
Preference number: 4 (lower is better)
Translates to: LRLREGHRARVLVYARINTVLIS*TNLPCT
Trigger: AGTGCATGGTAAATTTGTTCAGCTTATCAACACTGT...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGTCTGTAATTTACAACTaGCGTAAGGGCCTTATCCAA +
Preference number: 4 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSSVIYN*RKGLIQ
Trigger: TTGGATAAGGCCCTTACGTCAGTTGTAAATTACAGA...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR TCA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGAGACATGGATAACCCATaGATTAAACGTTTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGDMDNP*IKRFAS
Trigger: GCTGGCAAAACGTTTAATTCATGGGTTATCCATGTC...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAGACATGGATAACCCATaGATTAAACGTTTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: HRARVLVYARINGLCNRRDMDNP*IKRFAS
Trigger: GCTGGCAAAACGTTTAATTCATGGGTTATCCATGTC...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTAATTGCAAACGTAGATaGAGGAGCCTGAGTAAGAGG +
Preference number: 4 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFNCKRR*RSLSKR
Trigger: CCTCTTACTCAGGCTCCTTCATCTACGTTTGCAATT...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTCATCAACTGCAAACGTaGAGGGGAGAAAAAGCATGG +
Preference number: 4 (lower is better)
Translates to: RVLVYARINGLCNRRKTTHQLQT*RGEKAW
Trigger: CCATGCTTTTTCTCCCCTTCACGTTTGCAGTTGATG...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATATTTTGTGGTCAACCTaGTACTCCATCCACATAAAA +
Preference number: 4 (lower is better)
Translates to: LRLREGHRARVLVYARINILWST*YSIHIK
Trigger: TTTTATGTGGATGGAGTATCAGGTTGACCACAAAAT...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGAAAGCATTCTTTATGCTaGATGCAGTCCTATGCAGTC +
Preference number: 4 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGKHSLC*MQSYAV
Trigger: GACTGCATAGGACTGCATTCAGCATAAAGAATGCTT...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGAACCACCAGAAACTGCTaGTGGAATTACATCTTCAAG +
Preference number: 4 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGTTRNC*WNYIFK
Trigger: CTTGAAGATGTAATTCCATCAGCAGTTTCTGGTGGT...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGAAGACAACTTTTGAATaGAAAGCTCTCTCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSKTTFE*KALSVP
Trigger: TGGCACAGAGAGAGCTTTTCATTCAAAAGTTGTCTT...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR TCA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTCTCCAATCAACAGTCTaGTTCTCAATCAGACCTCTC +
Preference number: 4 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFLQSTV*FSIRPL
Trigger: GAGAGGTCTGATTGAGAATCAGACTGTTGATTGGAG...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673636.1
CDS-3UTR GCA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGAACGGTCATTCCATGTTaGTCTTTCGACGTATTCCAA +
Preference number: 4 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGTVIPC*SFDVFQ
Trigger: TTGGAATACGTCGAAAGAGCAACATGGAATGACCGT...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTGCAGTCCATATAGTCTaGACCCTTGCTGTATTCTTC +
Preference number: 4 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFAVHIV*TLAVFF
Trigger: GAAGAATACAGCAAGGGTGCAGACTATATGGACTGC...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATAAAGGCAAGAAGAACTaGCATTTGGTATGTTGTAAC +
Preference number: 4 (lower is better)
Translates to: LRLREGHRARVLVYARINKGKKN*HLVCCN
Trigger: GTTACAACATACCAAATGGCAGTTCTTCTTGCCTTT...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp CTTCATTCTCTGTCATCCCTTTCGCTGACTTCTTCAGTAAGTTGTCACAGTACTAAAAGACACATCAACTaGAAACGTGAAGGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: LHSLSSLSLTSSVSCHSTKRHIN*KREGEK
Trigger: TTTCTCCCCTTCACGTTTGCAGTTGATGTGTCTTTT...AGTACTGTGACAACTTACTGAAGAAGTCAGCGAAAGGGATGACAGAGAATGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374754.8
CDS-3UTR GCA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATATTCTTTATGCTGAATaGAGTCCTATGCAGTCAAGA +
Preference number: 4 (lower is better)
Translates to: LRLREGHRARVLVYARINILYAE*SPMQSR
Trigger: TCTTGACTGCATAGGACTGCATTCAGCATAAAGAAT...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CCA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGAAAGGATGGCCTGAAGTaGTTCAACCATCAATTTCCT +
Preference number: 4 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGKDGLK*FNHQFP
Trigger: AGGAAATTGATGGTTGAACCACTTCAGGCCATCCTT...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CCA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTCCATGGATTACTTTCTaGTTTGGGTCTTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFPWITF*FGSSPP
Trigger: TGGTGGAGAAGACCCAAACCAGAAAGTAATCCATGG...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CCA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTTATGAGGTAAACCAGTaGACACAGCACGGAGTAAGA +
Preference number: 4 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFYEVNQ*TQHGVR
Trigger: TCTTACTCCGTGCTGTGTCCACTGGTTTACCTCATA...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CCA 90 bp CTTCATTCTCTGTCATCCCTTTCGCTGACTTCTTCAGTAAGTTGTCACAGTACTAGAAGAACTGCCATTTaGTATGTTGTAACCATGGCT +
Preference number: 4 (lower is better)
Translates to: LHSLSSLSLTSSVSCHSTRRTAI*YVVTMA
Trigger: AGCCATGGTTACAACATACCAAATGGCAGTTCTTCT...AGTACTGTGACAACTTACTGAAGAAGTCAGCGAAAGGGATGACAGAGAATGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374754.8
CDS-3UTR CCA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTAACCTAGCTCTTGACTaGCTAATCACTTGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFNLALD*LITCGV
Trigger: CACACCACAAGTGATTAGCCAGTCAAGAGCTAGGTT...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374746.5
ENST00000626172.2
CDS-3UTR CCA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTGTAATCCCAGCACTTTaGGAGACAGAGATAGGATTG +
Preference number: 4 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFVIPAL*ETEIGL
Trigger: CAATCCTATCTCTGTCTCCCAAAGTGCTGGGATTAC...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR CCA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTCGAACTATAGCAGCTTaGAGATACATTTTCCGGTCC +
Preference number: 4 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFRTIAA*RYIFRS
Trigger: GGACCGGAAAATGTATCTCCAAGCTGCTATAGTTCG...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000673636.1
CDS-3UTR TCA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGACAGTGTTGATAAGCTaGACAAATTTACCATGCACT +
Preference number: 4 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSTVLIS*TNLPCT
Trigger: AGTGCATGGTAAATTTGTTCAGCTTATCAACACTGT...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR TCA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTGACATGGATAACCCATaGATTAAACGTTTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFDMDNP*IKRFAS
Trigger: GCTGGCAAAACGTTTAATTCATGGGTTATCCATGTC...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTAATTGCAAACGTAGATaGAGGAGCCTGAGTAAGAGG +
Preference number: 4 (lower is better)
Translates to: RVLVYARINGLCNRRKTTNCKRR*RSLSKR
Trigger: CCTCTTACTCAGGCTCCTTCATCTACGTTTGCAATT...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTAAGCATTCTTTATGCTaGATGCAGTCCTATGCAGTC +
Preference number: 4 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFKHSLC*MQSYAV
Trigger: GACTGCATAGGACTGCATTCAGCATAAAGAATGCTT...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGAAAGACAACTTTTGAATaGAAAGCTCTCTCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGKTTFE*KALSVP
Trigger: TGGCACAGAGAGAGCTTTTCATTCAAAAGTTGTCTT...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGAAAGGCAAGAAGAACTaGCATTTGGTATGTTGTAAC +
Preference number: 4 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSKGKKN*HLVCCN
Trigger: GTTACAACATACCAAATGGCAGTTCTTCTTGCCTTT...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR GCA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGAAAAAGACACATCAACTaGAAACGTGAAGGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGKRHIN*KREGEK
Trigger: TTTCTCCCCTTCACGTTTGCAGTTGATGTGTCTTTT...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGTTTCAAAGACATTGTaGAAGTGTAGTGTTGAAATC +
Preference number: 4 (lower is better)
Translates to: LRLREGHRARVLVYARINVSKTL*KCSVEI
Trigger: GATTTCAACACTACACTTGCACAATGTCTTTGAAAC...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTACTGCACTTCTAGTCTaGTCCATTTCTTGTGGTGTG +
Preference number: 4 (lower is better)
Translates to: RVLVYARINGLCNRRKTTTALLV*SISCGV
Trigger: CACACCACAAGAAATGGAGCAGACTAGAAGTGCAGT...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000673636.1
CDS-3UTR GCA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGCAGAATCTCAGATCTTaGCCTTATCAAAGACACAAA +
Preference number: 4 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSQNLRS*PYQRHK
Trigger: TTTGTGTCTTTGATAAGGGCAAGATCTGAGATTCTG...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537177.5
CDS-3UTR CCA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTCCATGGATTACTTTCTaGTTTGGGTCTTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: RVLVYARINGLCNRRKTTPWITF*FGSSPP
Trigger: TGGTGGAGAAGACCCAAACCAGAAAGTAATCCATGG...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CCA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTTATGAGGTAAACCAGTaGACACAGCACGGAGTAAGA +
Preference number: 4 (lower is better)
Translates to: RVLVYARINGLCNRRKTTYEVNQ*TQHGVR
Trigger: TCTTACTCCGTGCTGTGTCCACTGGTTTACCTCATA...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CCA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAGAAGAACTGCCATTTaGTATGTTGTAACCATGGCT +
Preference number: 4 (lower is better)
Translates to: HRARVLVYARINGLCNRRRRTAI*YVVTMA
Trigger: AGCCATGGTTACAACATACCAAATGGCAGTTCTTCT...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CCA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGGTGGTGGTGATGGTGTaGATAGACAATAAATATGAT +
Preference number: 4 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSVVVMV*IDNKYD
Trigger: ATCATATTTATTGTCTATCCACACCATCACCACCAC...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR CCA 90 bp CTTCATTCTCTGTCATCCCTTTCGCTGACTTCTTCAGTAAGTTGTCACAGTACTGTGGTGGTGATGGTGTaGATAGACAATAAATATGAT +
Preference number: 4 (lower is better)
Translates to: LHSLSSLSLTSSVSCHSTVVVMV*IDNKYD
Trigger: ATCATATTTATTGTCTATCCACACCATCACCACCAC...AGTACTGTGACAACTTACTGAAGAAGTCAGCGAAAGGGATGACAGAGAATGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374754.8
CDS-3UTR CCA 90 bp TGTAACCATGGCTACATATGGTTTGCCCAAATAGTTCATTTTAACTTCACCTGTGTAATCCCAGCACTTTaGGAGACAGAGATAGGATTG +
Preference number: 4 (lower is better)
Translates to: CNHGYIWFAQIVHFNFTCVIPAL*ETEIGL
Trigger: CAATCCTATCTCTGTCTCCCAAAGTGCTGGGATTAC...ACAGGTGAAGTTAAAATGAACTATTTGGGCAAACCATATGTAGCCATGGTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374754.8
CDS-3UTR CCA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTGTAATCCCAGCACTTTaGGAGACAGAGATAGGATTG +
Preference number: 4 (lower is better)
Translates to: RVLVYARINGLCNRRKTTVIPAL*ETEIGL
Trigger: CAATCCTATCTCTGTCTCCCAAAGTGCTGGGATTAC...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR CCA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTCGAACTATAGCAGCTTaGAGATACATTTTCCGGTCC +
Preference number: 4 (lower is better)
Translates to: RVLVYARINGLCNRRKTTRTIAA*RYIFRS
Trigger: GGACCGGAAAATGTATCTCCAAGCTGCTATAGTTCG...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000673636.1
CDS-3UTR TCA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAACAGTGTTGATAAGCTaGACAAATTTACCATGCACT +
Preference number: 4 (lower is better)
Translates to: HRARVLVYARINGLCNRRTVLIS*TNLPCT
Trigger: AGTGCATGGTAAATTTGTTCAGCTTATCAACACTGT...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTTCTGTAATTTACAACTaGCGTAAGGGCCTTATCCAA +
Preference number: 4 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFSVIYN*RKGLIQ
Trigger: TTGGATAAGGCCCTTACGTCAGTTGTAAATTACAGA...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTGACATGGATAACCCATaGATTAAACGTTTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: RVLVYARINGLCNRRKTTDMDNP*IKRFAS
Trigger: GCTGGCAAAACGTTTAATTCATGGGTTATCCATGTC...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGAATTTTGTGGTCAACCTaGTACTCCATCCACATAAAA +
Preference number: 4 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGILWST*YSIHIK
Trigger: TTTTATGTGGATGGAGTATCAGGTTGACCACAAAAT...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTAAGCATTCTTTATGCTaGATGCAGTCCTATGCAGTC +
Preference number: 4 (lower is better)
Translates to: RVLVYARINGLCNRRKTTKHSLC*MQSYAV
Trigger: GACTGCATAGGACTGCATTCAGCATAAAGAATGCTT...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp TGTAACCATGGCTACATATGGTTTGCCCAAATAGTTCATTTTAACTTCACCTGTACCACCAGAAACTGCTaGTGGAATTACATCTTCAAG +
Preference number: 4 (lower is better)
Translates to: CNHGYIWFAQIVHFNFTCTTRNC*WNYIFK
Trigger: CTTGAAGATGTAATTCCATCAGCAGTTTCTGGTGGT...ACAGGTGAAGTTAAAATGAACTATTTGGGCAAACCATATGTAGCCATGGTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374754.8
CDS-3UTR TCA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTACCACCAGAAACTGCTaGTGGAATTACATCTTCAAG +
Preference number: 4 (lower is better)
Translates to: RVLVYARINGLCNRRKTTTTRNC*WNYIFK
Trigger: CTTGAAGATGTAATTCCATCAGCAGTTTCTGGTGGT...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTAAGACAACTTTTGAATaGAAAGCTCTCTCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFKTTFE*KALSVP
Trigger: TGGCACAGAGAGAGCTTTTCATTCAAAAGTTGTCTT...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTACGGTCATTCCATGTTaGTCTTTCGACGTATTCCAA +
Preference number: 4 (lower is better)
Translates to: RVLVYARINGLCNRRKTTTVIPC*SFDVFQ
Trigger: TTGGAATACGTCGAAAGAGCAACATGGAATGACCGT...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGATTTTGCCAGCATTCTTaGGTAGAACTTTTGAAAGAC +
Preference number: 4 (lower is better)
Translates to: HRARVLVYARINGLCNRRFCQHS*VELLKD
Trigger: GTCTTTCAAAAGTTCTACGCAAGAATGCTGGCAAAA...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGATTTTGCCAGCATTCTTaGGTAGAACTTTTGAAAGAC +
Preference number: 4 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGFCQHS*VELLKD
Trigger: GTCTTTCAAAAGTTCTACGCAAGAATGCTGGCAAAA...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAAGGCAAGAAGAACTaGCATTTGGTATGTTGTAAC +
Preference number: 4 (lower is better)
Translates to: HRARVLVYARINGLCNRRKGKKN*HLVCCN
Trigger: GTTACAACATACCAAATGGCAGTTCTTCTTGCCTTT...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTAAAAGACACATCAACTaGAAACGTGAAGGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFKRHIN*KREGEK
Trigger: TTTCTCCCCTTCACGTTTGCAGTTGATGTGTCTTTT...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CCA 90 bp TGTAACCATGGCTACATATGGTTTGCCCAAATAGTTCATTTTAACTTCACCTGTAAGGATGGCCTGAAGTaGTTCAACCATCAATTTCCT +
Preference number: 4 (lower is better)
Translates to: CNHGYIWFAQIVHFNFTCKDGLK*FNHQFP
Trigger: AGGAAATTGATGGTTGAACCACTTCAGGCCATCCTT...ACAGGTGAAGTTAAAATGAACTATTTGGGCAAACCATATGTAGCCATGGTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374754.8
CDS-3UTR CCA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAGTGGTGGTGATGGTGTaGATAGACAATAAATATGAT +
Preference number: 4 (lower is better)
Translates to: HRARVLVYARINGLCNRRVVVMV*IDNKYD
Trigger: ATCATATTTATTGTCTATCCACACCATCACCACCAC...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR TCA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTACAGTGTTGATAAGCTaGACAAATTTACCATGCACT +
Preference number: 4 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFTVLIS*TNLPCT
Trigger: AGTGCATGGTAAATTTGTTCAGCTTATCAACACTGT...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTTCTGTAATTTACAACTaGCGTAAGGGCCTTATCCAA +
Preference number: 4 (lower is better)
Translates to: RVLVYARINGLCNRRKTTSVIYN*RKGLIQ
Trigger: TTGGATAAGGCCCTTACGTCAGTTGTAAATTACAGA...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR TCA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTAAGACAACTTTTGAATaGAAAGCTCTCTCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: RVLVYARINGLCNRRKTTKTTFE*KALSVP
Trigger: TGGCACAGAGAGAGCTTTTCATTCAAAAGTTGTCTT...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTTTTTGCCAGCATTCTTaGGTAGAACTTTTGAAAGAC +
Preference number: 4 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFFCQHS*VELLKD
Trigger: GTCTTTCAAAAGTTCTACGCAAGAATGCTGGCAAAA...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
38% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTAAAGGCAAGAAGAACTaGCATTTGGTATGTTGTAAC +
Preference number: 4 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFKGKKN*HLVCCN
Trigger: GTTACAACATACCAAATGGCAGTTCTTCTTGCCTTT...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGAGTTTCAAAGACATTGTaGAAGTGTAGTGTTGAAATC +
Preference number: 4 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGVSKTL*KCSVEI
Trigger: GATTTCAACACTACACTTGCACAATGTCTTTGAAAC...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAGTTTCAAAGACATTGTaGAAGTGTAGTGTTGAAATC +
Preference number: 4 (lower is better)
Translates to: HRARVLVYARINGLCNRRVSKTL*KCSVEI
Trigger: GATTTCAACACTACACTTGCACAATGTCTTTGAAAC...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CCA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTAGAAGAACTGCCATTTaGTATGTTGTAACCATGGCT +
Preference number: 4 (lower is better)
Translates to: RVLVYARINGLCNRRKTTRRTAI*YVVTMA
Trigger: AGCCATGGTTACAACATACCAAATGGCAGTTCTTCT...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CCA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTGTGGTGGTGATGGTGTaGATAGACAATAAATATGAT +
Preference number: 4 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFVVVMV*IDNKYD
Trigger: ATCATATTTATTGTCTATCCACACCATCACCACCAC...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR TCA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTACAGTGTTGATAAGCTaGACAAATTTACCATGCACT +
Preference number: 4 (lower is better)
Translates to: RVLVYARINGLCNRRKTTTVLIS*TNLPCT
Trigger: AGTGCATGGTAAATTTGTTCAGCTTATCAACACTGT...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTTTTTGCCAGCATTCTTaGGTAGAACTTTTGAAAGAC +
Preference number: 4 (lower is better)
Translates to: RVLVYARINGLCNRRKTTFCQHS*VELLKD
Trigger: GTCTTTCAAAAGTTCTACGCAAGAATGCTGGCAAAA...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTAAAGGCAAGAAGAACTaGCATTTGGTATGTTGTAAC +
Preference number: 4 (lower is better)
Translates to: RVLVYARINGLCNRRKTTKGKKN*HLVCCN
Trigger: GTTACAACATACCAAATGGCAGTTCTTCTTGCCTTT...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTATTCTTTATGCTGAATaGAGTCCTATGCAGTCAAGA +
Preference number: 4 (lower is better)
Translates to: RVLVYARINGLCNRRKTTILYAE*SPMQSR
Trigger: TCTTGACTGCATAGGACTGCATTCAGCATAAAGAAT...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp TGTAACCATGGCTACATATGGTTTGCCCAAATAGTTCATTTTAACTTCACCTGTATTCTTTATGCTGAATaGAGTCCTATGCAGTCAAGA +
Preference number: 4 (lower is better)
Translates to: CNHGYIWFAQIVHFNFTCILYAE*SPMQSR
Trigger: TCTTGACTGCATAGGACTGCATTCAGCATAAAGAAT...ACAGGTGAAGTTAAAATGAACTATTTGGGCAAACCATATGTAGCCATGGTTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374754.8
CDS-3UTR GCA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTGTTTCAAAGACATTGTaGAAGTGTAGTGTTGAAATC +
Preference number: 4 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFVSKTL*KCSVEI
Trigger: GATTTCAACACTACACTTGCACAATGTCTTTGAAAC...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000626172.2
ENST00000673636.1
CDS-3UTR GCA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTGTTTCAAAGACATTGTaGAAGTGTAGTGTTGAAATC +
Preference number: 4 (lower is better)
Translates to: RVLVYARINGLCNRRKTTVSKTL*KCSVEI
Trigger: GATTTCAACACTACACTTGCACAATGTCTTTGAAAC...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000626172.2
ENST00000673636.1
3UTR CAA 72 bp ACTGTGTCTTGGTTTTTGATAAAATTGTTGAACTTATaGTTGAGATCAGCGCTGACACTCATATCTGTATAC +
Preference number: 4 (lower is better)
Translates to: TVSWFLIKLLNL*LRSALTLISVY
Trigger: GTATACAGATATGAGTGTCAGCGCTGATCTCAACAATAAGTTCAACAATTTTATCAAAAACCAAGACACAGT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374754.8
CDS GCA 90 bp GTGGGCGGAGGCGGCGGCGGCGGCGGCTGTCAGCTCGCGTTCCCCTaGTCACAGCGCTGCCATTACTGTGCGCCGAGGCCGCCTCCCCGG +
Preference number: 5 (lower is better)
Translates to: VGGGGGGGGCQLAFP*SQRCHYCAPRPPPR
Trigger: CCGGGGAGGCGGCCTCGGCGCACAGTAATGGCAGCGCTGTGAGCAGGGGAACGCGAGCTGACAGCCGCCGCCGCCGCCGCCTCCGCCCAC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374748.5
ENST00000374754.8
CDS CCA 90 bp GCGGCCAAGATCGGGTTGGGGAGGCCCGGGATCCAGTCCAGGGGGTaGCAGGGCTTACGGGTCAGCGCTCTTCTGCAGAAGCAGGGCAAG +
Preference number: 5 (lower is better)
Translates to: AAKIGLGRPGIQSRG*QGLRVSALLQKQGK
Trigger: CTTGCCCTGCTTCTGCAGAAGAGCGCTGACCCGTAAGCCCTGCCACCCCCTGGACTGGATCCCGGGCCTCCCCAACCCGATCTTGGCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374748.5
ENST00000673636.1
CDS-3UTR CAA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGAGCGGCCAAGATCGGGTaGGGGAGGCCCGGGATCCAG +
Preference number: 5 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGAAKIG*GRPGIQ
Trigger: CTGGATCCCGGGCCTCCCCAACCCGATCTTGGCCGC...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374748.5
ENST00000673636.1
CDS GCA 90 bp GAAGGACGGGCCGATCACGGGATCCGTAAAACAATCGTCCTCCTCTaGCTCCGGCTTTGCCCAACACACACCCTCCGGTCTCCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: EGRADHGIRKTIVLL*LRLCPTHTLRSPSS
Trigger: GGAAGAAGGAGACCGGAGGGTGTGTGTTGGGCAAAGCCGGAGGCAGAGGAGGACGATTGTTTTACGGATCCCGTGATCGGCCCGTCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374751.7
ENST00000374754.8
ENST00000626172.2
CDS-3UTR CAA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGACTCTCTGTGCCAGACTaGAGGTCACCAAGCATCCTG +
Preference number: 5 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGLSVPD*RSPSIL
Trigger: CAGGATGCTTGGTGACCTCAAGTCTGGCACAGAGAG...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGCGGCCAAGATCGGGTaGGGGAGGCCCGGGATCCAG +
Preference number: 5 (lower is better)
Translates to: LRLREGHRARVLVYARINAAKIG*GRPGIQ
Trigger: CTGGATCCCGGGCCTCCCCAACCCGATCTTGGCCGC...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374748.5
ENST00000673636.1
CDS-3UTR CAA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGAGAGACAGAGATAGGATaGCTTGAGGCCAGAAGTTCC +
Preference number: 5 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGETEIG*LEARSS
Trigger: GGAACTTCTGGCCTCAAGCAATCCTATCTCTGTCTC...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR CAA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGATGTGCAAGTGTAGTGTaGAAATCTGTCTCCGCGAGG +
Preference number: 5 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGCASVV*KSVSAR
Trigger: CCTCGCGGAGACAGATTTCAACACTACACTTGCACA...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374751.7
ENST00000626172.2
CDS-3UTR CAA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGAGGATTACTTTCTGGTTaGGGTCTTCTCCACCACGAT +
Preference number: 5 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGGLLSG*GLLHHD
Trigger: ATCGTGGTGGAGAAGACCCAAACCAGAAAGTAATCC...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGAAACGGTCATTCCATGTaGCTCTTTCGACGTATTCCA +
Preference number: 5 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGNGHSM*LFRRIP
Trigger: TGGAATACGTCGAAAGAGCAACATGGAATGACCGTT...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGACCACCACGATCATTTTaGATTTCTCGGAGCAGCATT +
Preference number: 5 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGPPRSF*ISRSSI
Trigger: AATGCTGCTCCGAGAAATCAAAAATGATCGTGGTGG...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGAAGCAGTTCAGGTGCTTaGCAAACAGACTTAGGTTCT +
Preference number: 5 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGSSSGA*QTDLGS
Trigger: AGAACCTAAGTCTGTTTGCAAAGCACCTGAACTGCT...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGAAAGAAAAATTGTATGTaGAGGGAGGAGGGGTGTGGT +
Preference number: 5 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGKKNCM*REEGCG
Trigger: ACCACACCCCTCCTCCCTCAACATACAATTTTTCTT...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR CAA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGATGTAATCCCAGCACTTaGGGAGACAGAGATAGGATT +
Preference number: 5 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGCNPST*GDRDRI
Trigger: AATCCTATCTCTGTCTCCCAAAGTGCTGGGATTACA...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR CAA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGAACGAACTATAGCAGCTaGGAGATACATTTTCCGGTC +
Preference number: 5 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGTNYSS*EIHFPV
Trigger: GACCGGAAAATGTATCTCCAAGCTGCTATAGTTCGT...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000673636.1
CDS-3UTR CAA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGACCTCTGCCTCCGGCTTaGCCCAACACACACCCTCCG +
Preference number: 5 (lower is better)
Translates to: HRARVLVYARINGLCNRRPLPPA*PNTHPP
Trigger: CGGAGGGTGTGTGTTGGGCAAAGCCGGAGGCAGAGG...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374751.7
ENST00000374754.8
ENST00000626172.2
CDS-3UTR CAA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGACCTCTGCCTCCGGCTTaGCCCAACACACACCCTCCG +
Preference number: 5 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGPLPPA*PNTHPP
Trigger: CGGAGGGTGTGTGTTGGGCAAAGCCGGAGGCAGAGG...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374751.7
ENST00000374754.8
ENST00000626172.2
CDS-3UTR CAA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGATCTTGCGTAGAACTTTaGAAAGACGTCCTTGTCATC +
Preference number: 5 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGSCVEL*KDVLVI
Trigger: GATGACAAGGACGTCTTTCAAAAGTTCTACGCAAGA...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS GCA 90 bp AGTTTGTTGTTTCCTTCTACAGACAGCATTCAGTTTGGGCTCAACTaGAACATGGCACCCAAGCTTCCTCTCCTCCTGGTACTCCCTACT +
Preference number: 5 (lower is better)
Translates to: SLLFPSTDSIQFGLN*NMAPKLPLLLVLPT
Trigger: AGTAGGGAGTACCAGGAGGAGAGGAAGCTTGGGTGCCATGTTGCAGTTGAGCCCAAACTGAATGCTGTCTGTAGAAGGAAACAACAAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537177.5
CDS-3UTR CAA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGACATGAATTAAACGTTTaGCCAGCATTCTTGCGTAGA +
Preference number: 5 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGHELNV*PAFLRR
Trigger: TCTACGCAAGAATGCTGGCAAAACGTTTAATTCATG...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGAGCTTGCTTTAATTTGTaGATCATGGCTTCTTCAGAG +
Preference number: 5 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGACFNL*IMASSE
Trigger: CTCTGAAGAAGCCATGATCAACAAATTAAAGCAAGC...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTCCTCTGCCTCCGGCTTaGCCCAACACACACCCTCCG +
Preference number: 5 (lower is better)
Translates to: RVLVYARINGLCNRRKTTPLPPA*PNTHPP
Trigger: CGGAGGGTGTGTGTTGGGCAAAGCCGGAGGCAGAGG...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374751.7
ENST00000374754.8
ENST00000626172.2
CDS GCA 90 bp GGACCTCCTGGTGGTTATACTCCAGACTGTTCCATGATAAAGCTATaGCATCTTATCAGTACGATGACCACCACCAAGTGTCTCCAAGGT +
Preference number: 5 (lower is better)
Translates to: GPPGGYTPDCSMIKL*HLISTMTTTKCLQG
Trigger: ACCTTGGAGACACTTGGTGGTGGTCATCGTACTGATAAGATGGCATAGCTTTATCATGGAACAGTCTGGAGTATAACCACCAGGAGGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478044.1
CDS-3UTR CAA 90 bp GTGCCAGACTTGAGGTCACCAAGCATCCTGCTCACACTCTGCGATGTCTGTGGAAAATTGTTGAACTTATaGTTGAGATCAGCGCTGACA +
Preference number: 5 (lower is better)
Translates to: VPDLRSPSILLTLCDVCGKLLNL*LRSALT
Trigger: TGTCAGCGCTGATCTCAACAATAAGTTCAACAATTT...TCCACAGACATCGCAGAGTGTGAGCAGGATGCTTGGTGACCTCAAGTCTGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp GATTTCTCGGAGCAGCATTCGGATAAGGATGGCCTGAAGTGGTTCAACCATCAACCACCACGATCATTTTaGATTTCTCGGAGCAGCATT +
Preference number: 5 (lower is better)
Translates to: DFSEQHSDKDGLKWFNHQPPRSF*ISRSSI
Trigger: AATGCTGCTCCGAGAAATCAAAAATGATCGTGGTGG...TTGATGGTTGAACCACTTCAGGCCATCCTTATCCGAATGCTGCTCCGAGAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374754.8
CDS-3UTR CAA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGACTCTCTGTGCCAGACTaGAGGTCACCAAGCATCCTG +
Preference number: 5 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGLSVPD*RSPSIL
Trigger: CAGGATGCTTGGTGACCTCAAGTCTGGCACAGAGAG...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGAGACAGAGATAGGATaGCTTGAGGCCAGAAGTTCC +
Preference number: 5 (lower is better)
Translates to: LRLREGHRARVLVYARINETEIG*LEARSS
Trigger: GGAACTTCTGGCCTCAAGCAATCCTATCTCTGTCTC...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR CAA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATTGTGCAAGTGTAGTGTaGAAATCTGTCTCCGCGAGG +
Preference number: 5 (lower is better)
Translates to: LRLREGHRARVLVYARINCASVV*KSVSAR
Trigger: CCTCGCGGAGACAGATTTCAACACTACACTTGCACA...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374751.7
ENST00000626172.2
CDS-3UTR CAA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTACTTTCTGGTTaGGGTCTTCTCCACCACGAT +
Preference number: 5 (lower is better)
Translates to: LRLREGHRARVLVYARINGLLSG*GLLHHD
Trigger: ATCGTGGTGGAGAAGACCCAAACCAGAAAGTAATCC...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGGAGACAGAGATAGGATaGCTTGAGGCCAGAAGTTCC +
Preference number: 5 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSETEIG*LEARSS
Trigger: GGAACTTCTGGCCTCAAGCAATCCTATCTCTGTCTC...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR CAA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATTGTGCAAGTGTAGTGTaGAAATTCCTTGCCAGGCAC +
Preference number: 5 (lower is better)
Translates to: LRLREGHRARVLVYARINCASVV*KFLARH
Trigger: GTGCCTGGCAAGGAATTTCAACACTACACTTGCACA...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537177.5
CDS-3UTR CAA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATAACGGTCATTCCATGTaGCTCTTTCGACGTATTCCA +
Preference number: 5 (lower is better)
Translates to: LRLREGHRARVLVYARINNGHSM*LFRRIP
Trigger: TGGAATACGTCGAAAGAGCAACATGGAATGACCGTT...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGGGATTACTTTCTGGTTaGGGTCTTCTCCACCACGAT +
Preference number: 5 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSGLLSG*GLLHHD
Trigger: ATCGTGGTGGAGAAGACCCAAACCAGAAAGTAATCC...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR CAA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATAGCAGTTCAGGTGCTTaGCAAACAGACTTAGGTTCT +
Preference number: 5 (lower is better)
Translates to: LRLREGHRARVLVYARINSSSGA*QTDLGS
Trigger: AGAACCTAAGTCTGTTTGCAAAGCACCTGAACTGCT...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTCTCTCTGTGCCAGACTaGAGGTCACCAAGCATCCTG +
Preference number: 5 (lower is better)
Translates to: RVLVYARINGLCNRRKTTLSVPD*RSPSIL
Trigger: CAGGATGCTTGGTGACCTCAAGTCTGGCACAGAGAG...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp TGTAACCATGGCTACATATGGTTTGCCCAAATAGTTCATTTTAACTTCACCTGTCTCTCTGTGCCAGACTaGAGGTCACCAAGCATCCTG +
Preference number: 5 (lower is better)
Translates to: CNHGYIWFAQIVHFNFTCLSVPD*RSPSIL
Trigger: CAGGATGCTTGGTGACCTCAAGTCTGGCACAGAGAG...ACAGGTGAAGTTAAAATGAACTATTTGGGCAAACCATATGTAGCCATGGTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374754.8
CDS-3UTR CAA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATCTAGTATCTAAACTGTaGGAGGAGGGTTGTAAGGGT +
Preference number: 5 (lower is better)
Translates to: LRLREGHRARVLVYARINLVSKL*EEGCKG
Trigger: ACCCTTACAACCCTCCTCCAACAGTTTAGATACTAG...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATAAGAAAAATTGTATGTaGAGGGAGGAGGGGTGTGGT +
Preference number: 5 (lower is better)
Translates to: LRLREGHRARVLVYARINKKNCM*REEGCG
Trigger: ACCACACCCCTCCTCCCTCAACATACAATTTTTCTT...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR CAA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGAGAGACAGAGATAGGATaGCTTGAGGCCAGAAGTTCC +
Preference number: 5 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGETEIG*LEARSS
Trigger: GGAACTTCTGGCCTCAAGCAATCCTATCTCTGTCTC...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR CAA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAGAGACAGAGATAGGATaGCTTGAGGCCAGAAGTTCC +
Preference number: 5 (lower is better)
Translates to: HRARVLVYARINGLCNRRETEIG*LEARSS
Trigger: GGAACTTCTGGCCTCAAGCAATCCTATCTCTGTCTC...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR CAA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATTGTAATCCCAGCACTTaGGGAGACAGAGATAGGATT +
Preference number: 5 (lower is better)
Translates to: LRLREGHRARVLVYARINCNPST*GDRDRI
Trigger: AATCCTATCTCTGTCTCCCAAAGTGCTGGGATTACA...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR CAA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATAGTCTGCTCCATTTCTaGTGGTGTGTCTTTCTGCAT +
Preference number: 5 (lower is better)
Translates to: LRLREGHRARVLVYARINSLLHF*WCVFLH
Trigger: ATGCAGAAAGACACACCACAAGAAATGGAGCAGACT...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000673636.1
CDS-3UTR CAA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATACGAACTATAGCAGCTaGGAGATACATTTTCCGGTC +
Preference number: 5 (lower is better)
Translates to: LRLREGHRARVLVYARINTNYSS*EIHFPV
Trigger: GACCGGAAAATGTATCTCCAAGCTGCTATAGTTCGT...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000673636.1
CDS-3UTR CAA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGACAGACAGCATTCAGTTaGGGCTCAACTGCAACATGG +
Preference number: 5 (lower is better)
Translates to: HRARVLVYARINGLCNRRQTAFS*GSTATW
Trigger: CCATGTTGCAGTTGAGCCCAAACTGAATGCTGTCTG...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537177.5
CDS GCA 90 bp CTCTTGGTTTCAAAGACATTGTGCAAGTGTAGTGTTGAAATTCCTTaGCAGGCACCATTCCAAGCTCTGAGGATACAGTGGACAAAACAA +
Preference number: 5 (lower is better)
Translates to: LLVSKTLCKCSVEIP*QAPFQALRIQWTKQ
Trigger: TTGTTTTGTCCACTGTATCCTCAGAGCTTGGAATGGTGCCTGGCAAGGAATTTCAACACTACACTTGCACAATGTCTTTGAAACCAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537177.5
CDS-3UTR CAA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGAACGGTCATTCCATGTaGCTCTTTCGACGTATTCCA +
Preference number: 5 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSNGHSM*LFRRIP
Trigger: TGGAATACGTCGAAAGAGCAACATGGAATGACCGTT...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR CAA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAGGATTACTTTCTGGTTaGGGTCTTCTCCACCACGAT +
Preference number: 5 (lower is better)
Translates to: HRARVLVYARINGLCNRRGLLSG*GLLHHD
Trigger: ATCGTGGTGGAGAAGACCCAAACCAGAAAGTAATCC...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGAGCAGTTCAGGTGCTTaGCAAACAGACTTAGGTTCT +
Preference number: 5 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSSSSGA*QTDLGS
Trigger: AGAACCTAAGTCTGTTTGCAAAGCACCTGAACTGCT...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR CAA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATTCTTGCGTAGAACTTTaGAAAGACGTCCTTGTCATC +
Preference number: 5 (lower is better)
Translates to: LRLREGHRARVLVYARINSCVEL*KDVLVI
Trigger: GATGACAAGGACGTCTTTCAAAAGTTCTACGCAAGA...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp GAGTTAATAACCCCATGGATTACTTTCTGGTTTGGGTCTTCTCCACCACGATCATTGTTGAACTTATTGTaGAGATCAGCGCTGACACTC +
Preference number: 5 (lower is better)
Translates to: ELITPWITFWFGSSPPRSLLNLL*RSALTL
Trigger: GAGTGTCAGCGCTGATCTCAACAATAAGTTCAACAA...TGATCGTGGTGGAGAAGACCCAAACCAGAAAGTAATCCATGGGGTTATTAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374754.8
CDS-3UTR CAA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATAAGAAGAACTGCCATTaGGTATGTTGTAACCATGGC +
Preference number: 5 (lower is better)
Translates to: LRLREGHRARVLVYARINKKNCH*VCCNHG
Trigger: GCCATGGTTACAACATACCAAATGGCAGTTCTTCTT...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGAAGAAAAATTGTATGTaGAGGGAGGAGGGGTGTGGT +
Preference number: 5 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSKKNCM*REEGCG
Trigger: ACCACACCCCTCCTCCCTCAACATACAATTTTTCTT...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR CAA 90 bp CTTCATTCTCTGTCATCCCTTTCGCTGACTTCTTCAGTAAGTTGTCACAGTACTTGTAATCCCAGCACTTaGGGAGACAGAGATAGGATT +
Preference number: 5 (lower is better)
Translates to: LHSLSSLSLTSSVSCHSTCNPST*GDRDRI
Trigger: AATCCTATCTCTGTCTCCCAAAGTGCTGGGATTACA...AGTACTGTGACAACTTACTGAAGAAGTCAGCGAAAGGGATGACAGAGAATGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374754.8
CDS-3UTR CAA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGAGTCTGCTCCATTTCTaGTGGTGTGTCTTTCTGCAT +
Preference number: 5 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSSLLHF*WCVFLH
Trigger: ATGCAGAAAGACACACCACAAGAAATGGAGCAGACT...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
CDS TCA 90 bp AGTACGATGACCACCACCAAGTGTCTCCAAGGTAAAGATAATGAATaGGAAACGGTCATTCCATGTTGCTCTTTCGACGTATTCCAACAT +
Preference number: 5 (lower is better)
Translates to: STMTTTKCLQGKDNE*ETVIPCCSFDVFQH
Trigger: ATGTTGGAATACGTCGAAAGAGCAACATGGAATGACCGTTTCTCATTCATTATCTTTACCTTGGAGACACTTGGTGGTGGTCATCGTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478044.1
CDS-3UTR CAA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGAAACGGTCATTCCATGTaGCTCTTTCGACGTATTCCA +
Preference number: 5 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGNGHSM*LFRRIP
Trigger: TGGAATACGTCGAAAGAGCAACATGGAATGACCGTT...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGACCACCACGATCATTTTaGATTTCTCGGAGCAGCATT +
Preference number: 5 (lower is better)
Translates to: HRARVLVYARINGLCNRRPPRSF*ISRSSI
Trigger: AATGCTGCTCCGAGAAATCAAAAATGATCGTGGTGG...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTGGATTACTTTCTGGTTaGGGTCTTCTCCACCACGAT +
Preference number: 5 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFGLLSG*GLLHHD
Trigger: ATCGTGGTGGAGAAGACCCAAACCAGAAAGTAATCC...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAGCAGTTCAGGTGCTTaGCAAACAGACTTAGGTTCT +
Preference number: 5 (lower is better)
Translates to: HRARVLVYARINGLCNRRSSSGA*QTDLGS
Trigger: AGAACCTAAGTCTGTTTGCAAAGCACCTGAACTGCT...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATCAGGCTTGCTTTAATTaGTTGATCATGGCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: LRLREGHRARVLVYARINQACFN*LIMASS
Trigger: TGAAGAAGCCATGATCAACAAATTAAAGCAAGCCTG...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGTTGTTGAACTTATTGTaGAGATCAGCGCTGACACTC +
Preference number: 5 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSLLNLL*RSALTL
Trigger: GAGTGTCAGCGCTGATCTCAACAATAAGTTCAACAA...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR CAA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGAAGAAGAACTGCCATTaGGTATGTTGTAACCATGGC +
Preference number: 5 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSKKNCH*VCCNHG
Trigger: GCCATGGTTACAACATACCAAATGGCAGTTCTTCTT...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR CAA 90 bp CTTCATTCTCTGTCATCCCTTTCGCTGACTTCTTCAGTAAGTTGTCACAGTACTAAGAAGAACTGCCATTaGGTATGTTGTAACCATGGC +
Preference number: 5 (lower is better)
Translates to: LHSLSSLSLTSSVSCHSTKKNCH*VCCNHG
Trigger: GCCATGGTTACAACATACCAAATGGCAGTTCTTCTT...AGTACTGTGACAACTTACTGAAGAAGTCAGCGAAAGGGATGACAGAGAATGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374754.8
CDS-3UTR CAA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGACTAGTATCTAAACTGTaGGAGGAGGGTTGTAAGGGT +
Preference number: 5 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGLVSKL*EEGCKG
Trigger: ACCCTTACAACCCTCCTCCAACAGTTTAGATACTAG...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGACTAGTATCTAAACTGTaGGAGGAGGGTTGTAAGGGT +
Preference number: 5 (lower is better)
Translates to: HRARVLVYARINGLCNRRLVSKL*EEGCKG
Trigger: ACCCTTACAACCCTCCTCCAACAGTTTAGATACTAG...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGAAAAATTGTATGTaGAGGGAGGAGGGGTGTGGT +
Preference number: 5 (lower is better)
Translates to: HRARVLVYARINGLCNRRKKNCM*REEGCG
Trigger: ACCACACCCCTCCTCCCTCAACATACAATTTTTCTT...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR CAA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGAAAGAAAAATTGTATGTaGAGGGAGGAGGGGTGTGGT +
Preference number: 5 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGKKNCM*REEGCG
Trigger: ACCACACCCCTCCTCCCTCAACATACAATTTTTCTT...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR CAA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGATGTAATCCCAGCACTTaGGGAGACAGAGATAGGATT +
Preference number: 5 (lower is better)
Translates to: HRARVLVYARINGLCNRRCNPST*GDRDRI
Trigger: AATCCTATCTCTGTCTCCCAAAGTGCTGGGATTACA...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR CAA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGATGTAATCCCAGCACTTaGGGAGACAGAGATAGGATT +
Preference number: 5 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGCNPST*GDRDRI
Trigger: AATCCTATCTCTGTCTCCCAAAGTGCTGGGATTACA...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR CAA 90 bp CTTCATTCTCTGTCATCCCTTTCGCTGACTTCTTCAGTAAGTTGTCACAGTACTTGTGCAAGTGTAGTGTaGAAATCTTCTGCAGAAGCA +
Preference number: 5 (lower is better)
Translates to: LHSLSSLSLTSSVSCHSTCASVV*KSSAEA
Trigger: TGCTTCTGCAGAAGATTTCAACACTACACTTGCACA...AGTACTGTGACAACTTACTGAAGAAGTCAGCGAAAGGGATGACAGAGAATGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374754.8
CDS-3UTR CAA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGAAGTCTGCTCCATTTCTaGTGGTGTGTCTTTCTGCAT +
Preference number: 5 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGSLLHF*WCVFLH
Trigger: ATGCAGAAAGACACACCACAAGAAATGGAGCAGACT...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000673636.1
CDS-3UTR CAA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGAACGAACTATAGCAGCTaGGAGATACATTTTCCGGTC +
Preference number: 5 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGTNYSS*EIHFPV
Trigger: GACCGGAAAATGTATCTCCAAGCTGCTATAGTTCGT...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000673636.1
CDS-3UTR CAA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATTCAGAATCTCAGATCTaGCCCTTATCAAAGACACAA +
Preference number: 5 (lower is better)
Translates to: LRLREGHRARVLVYARINSESQI*PLSKTQ
Trigger: TTGTGTCTTTGATAAGGGCAAGATCTGAGATTCTGA...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537177.5
CDS TCA 90 bp CTGAGAAACGGTCATTCCATGTTGCTCTTTCGACGTATTCCAACATaGCCACGGCTTTTATTGTCGTCAAAAGTTTGTTCCATGTTTCAT +
Preference number: 5 (lower is better)
Translates to: LRNGHSMLLFRRIPT*PRLLLSSKVCSMFH
Trigger: ATGAAACATGGAACAAACTTTTGACGACAATAAAAGCCGTGGTCATGTTGGAATACGTCGAAAGAGCAACATGGAATGACCGTTTCTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000421317.4
ENST00000468804.5
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp GGCAAGAAGAACTGCCATTTGGTATGTTGTAACCATGGCTACATATGGTTTGCCTTGGTTTCAAAGACATaGTGCAAGTGTAGTGTTGAA +
Preference number: 5 (lower is better)
Translates to: GKKNCHLVCCNHGYIWFALVSKT*CKCSVE
Trigger: TTCAACACTACACTTGCACAATGTCTTTGAAACCAA...GGCAAACCATATGTAGCCATGGTTACAACATACCAAATGGCAGTTCTTCTTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374754.8
CDS-3UTR CAA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATTTGGTTTCAAAGACATaGTGCAAGTGTAGTGTTGAA +
Preference number: 5 (lower is better)
Translates to: LRLREGHRARVLVYARINLVSKT*CKCSVE
Trigger: TTCAACACTACACTTGCACAATGTCTTTGAAACCAA...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTAACGGTCATTCCATGTaGCTCTTTCGACGTATTCCA +
Preference number: 5 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFNGHSM*LFRRIP
Trigger: TGGAATACGTCGAAAGAGCAACATGGAATGACCGTT...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTCCACCACGATCATTTTaGATTTCTCGGAGCAGCATT +
Preference number: 5 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFPPRSF*ISRSSI
Trigger: AATGCTGCTCCGAGAAATCAAAAATGATCGTGGTGG...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp CTAAGACTCAGGGAAGGCCACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATTTGTCATCAATGTATTaGAACACTGTGATGAAGCTC +
Preference number: 5 (lower is better)
Translates to: LRLREGHRARVLVYARINLSSMY*NTVMKL
Trigger: GAGCTTCATCACAGTGTTCAAATACATTGATGACAA...ATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTGGCCTTCCCTGAGTCTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGATCTTGCGTAGAACTTTaGAAAGACGTCCTTGTCATC +
Preference number: 5 (lower is better)
Translates to: HRARVLVYARINGLCNRRSCVEL*KDVLVI
Trigger: GATGACAAGGACGTCTTTCAAAAGTTCTACGCAAGA...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGATCTTGCGTAGAACTTTaGAAAGACGTCCTTGTCATC +
Preference number: 5 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGSCVEL*KDVLVI
Trigger: GATGACAAGGACGTCTTTCAAAAGTTCTACGCAAGA...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGGTTTTGCCAGCATTCTaGCGTAGAACTTTTGAAAGA +
Preference number: 5 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSVLPAF*RRTFER
Trigger: TCTTTCAAAAGTTCTACGCAAGAATGCTGGCAAAAC...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR CAA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGCATGAATTAAACGTTTaGCCAGCATTCTTGCGTAGA +
Preference number: 5 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSHELNV*PAFLRR
Trigger: TCTACGCAAGAATGCTGGCAAAACGTTTAATTCATG...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR CAA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGCAGGCTTGCTTTAATTaGTTGATCATGGCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSQACFN*LIMASS
Trigger: TGAAGAAGCCATGATCAACAAATTAAAGCAAGCCTG...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR CAA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGATTGTTGAACTTATTGTaGAGATCAGCGCTGACACTC +
Preference number: 5 (lower is better)
Translates to: HRARVLVYARINGLCNRRLLNLL*RSALTL
Trigger: GAGTGTCAGCGCTGATCTCAACAATAAGTTCAACAA...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGATTGTTGAACTTATTGTaGAGATCAGCGCTGACACTC +
Preference number: 5 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGLLNLL*RSALTL
Trigger: GAGTGTCAGCGCTGATCTCAACAATAAGTTCAACAA...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGAAGAACTGCCATTaGGTATGTTGTAACCATGGC +
Preference number: 5 (lower is better)
Translates to: HRARVLVYARINGLCNRRKKNCH*VCCNHG
Trigger: GCCATGGTTACAACATACCAAATGGCAGTTCTTCTT...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTCTAGTATCTAAACTGTaGGAGGAGGGTTGTAAGGGT +
Preference number: 5 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFLVSKL*EEGCKG
Trigger: ACCCTTACAACCCTCCTCCAACAGTTTAGATACTAG...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTAGTCTGCTCCATTTCTaGTGGTGTGTCTTTCTGCAT +
Preference number: 5 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFSLLHF*WCVFLH
Trigger: ATGCAGAAAGACACACCACAAGAAATGGAGCAGACT...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000673636.1
CDS TCA 90 bp ATGAGAAACGGTCATTCCATGTTGCTCTTTCGACGTATTCCAACATaGCCACGGCTTTTATTGTCGTCAAAAGTTTGTTCCATGTTTCAT +
Preference number: 5 (lower is better)
Translates to: MRNGHSMLLFRRIPT*PRLLLSSKVCSMFH
Trigger: ATGAAACATGGAACAAACTTTTGACGACAATAAAAGCCGTGGTCATGTTGGAATACGTCGAAAGAGCAACATGGAATGACCGTTTCTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478044.1
CDS GCA 90 bp TCCATGTTTCATCAAAATCTACTACTCTTGGTTTCAAAGACATTGTaGAAGTGTAGTGTTGAAATTCCTTGCCAGGCACCATTCCAAGCT +
Preference number: 5 (lower is better)
Translates to: SMFHQNLLLLVSKTL*KCSVEIPCQAPFQA
Trigger: AGCTTGGAATGGTGCCTGGCAAGGAATTTCAACACTACACTTGCACAATGTCTTTGAAACCAAGAGTAGTAGATTTTGATGAAACATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537177.5
CDS-3UTR CAA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTCCACCACGATCATTTTaGATTTCTCGGAGCAGCATT +
Preference number: 5 (lower is better)
Translates to: RVLVYARINGLCNRRKTTPPRSF*ISRSSI
Trigger: AATGCTGCTCCGAGAAATCAAAAATGATCGTGGTGG...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTAGCAGTTCAGGTGCTTaGCAAACAGACTTAGGTTCT +
Preference number: 5 (lower is better)
Translates to: RVLVYARINGLCNRRKTTSSSGA*QTDLGS
Trigger: AGAACCTAAGTCTGTTTGCAAAGCACCTGAACTGCT...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGTTGTCATCAATGTATTaGAACACTGTGATGAAGCTC +
Preference number: 5 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSLSSMY*NTVMKL
Trigger: GAGCTTCATCACAGTGTTCAAATACATTGATGACAA...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR CAA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAGTTTTGCCAGCATTCTaGCGTAGAACTTTTGAAAGA +
Preference number: 5 (lower is better)
Translates to: HRARVLVYARINGLCNRRVLPAF*RRTFER
Trigger: TCTTTCAAAAGTTCTACGCAAGAATGCTGGCAAAAC...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGAGTTTTGCCAGCATTCTaGCGTAGAACTTTTGAAAGA +
Preference number: 5 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGVLPAF*RRTFER
Trigger: TCTTTCAAAAGTTCTACGCAAGAATGCTGGCAAAAC...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGACATGAATTAAACGTTTaGCCAGCATTCTTGCGTAGA +
Preference number: 5 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGHELNV*PAFLRR
Trigger: TCTACGCAAGAATGCTGGCAAAACGTTTAATTCATG...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAGCTTGCTTTAATTTGTaGATCATGGCTTCTTCAGAG +
Preference number: 5 (lower is better)
Translates to: HRARVLVYARINGLCNRRACFNL*IMASSE
Trigger: CTCTGAAGAAGCCATGATCAACAAATTAAAGCAAGC...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGAGCTTGCTTTAATTTGTaGATCATGGCTTCTTCAGAG +
Preference number: 5 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGACFNL*IMASSE
Trigger: CTCTGAAGAAGCCATGATCAACAAATTAAAGCAAGC...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGACAGGCTTGCTTTAATTaGTTGATCATGGCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: HRARVLVYARINGLCNRRQACFN*LIMASS
Trigger: TGAAGAAGCCATGATCAACAAATTAAAGCAAGCCTG...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGACAGGCTTGCTTTAATTaGTTGATCATGGCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGQACFN*LIMASS
Trigger: TGAAGAAGCCATGATCAACAAATTAAAGCAAGCCTG...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTTTGTTGAACTTATTGTaGAGATCAGCGCTGACACTC +
Preference number: 5 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFLLNLL*RSALTL
Trigger: GAGTGTCAGCGCTGATCTCAACAATAAGTTCAACAA...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp GGTGTGGTGGTGGTGGTGATGGTGTGGATAGACAATAAATATGATAATAGATCGAAATTGTTGAACTTATaGTTGAGATCAGCGCTGACA +
Preference number: 5 (lower is better)
Translates to: GVVVVVMVWIDNKYDNRSKLLNL*LRSALT
Trigger: TGTCAGCGCTGATCTCAACAATAAGTTCAACAATTT...CGATCTATTATCATATTTATTGTCTATCCACACCATCACCACCACCACCACACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR CAA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTCTAGTATCTAAACTGTaGGAGGAGGGTTGTAAGGGT +
Preference number: 5 (lower is better)
Translates to: RVLVYARINGLCNRRKTTLVSKL*EEGCKG
Trigger: ACCCTTACAACCCTCCTCCAACAGTTTAGATACTAG...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTAAGAAAAATTGTATGTaGAGGGAGGAGGGGTGTGGT +
Preference number: 5 (lower is better)
Translates to: RVLVYARINGLCNRRKTTKKNCM*REEGCG
Trigger: ACCACACCCCTCCTCCCTCAACATACAATTTTTCTT...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR CAA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTTGTAATCCCAGCACTTaGGGAGACAGAGATAGGATT +
Preference number: 5 (lower is better)
Translates to: RVLVYARINGLCNRRKTTCNPST*GDRDRI
Trigger: AATCCTATCTCTGTCTCCCAAAGTGCTGGGATTACA...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
CDS-3UTR CAA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTAGTCTGCTCCATTTCTaGTGGTGTGTCTTTCTGCAT +
Preference number: 5 (lower is better)
Translates to: RVLVYARINGLCNRRKTTSLLHF*WCVFLH
Trigger: ATGCAGAAAGACACACCACAAGAAATGGAGCAGACT...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000673636.1
CDS-3UTR CAA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTACGAACTATAGCAGCTaGGAGATACATTTTCCGGTC +
Preference number: 5 (lower is better)
Translates to: RVLVYARINGLCNRRKTTTNYSS*EIHFPV
Trigger: GACCGGAAAATGTATCTCCAAGCTGCTATAGTTCGT...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000673636.1
CDS-3UTR CAA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTTGTGCAAGTGTAGTGTaGAAATCTTCCCTCCTTCGA +
Preference number: 5 (lower is better)
Translates to: RVLVYARINGLCNRRKTTCASVV*KSSLLR
Trigger: TCGAAGGAGGGAAGATTTCAACACTACACTTGCACA...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374748.5
CDS-3UTR CAA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGATTGGTTTCAAAGACATaGTGCAAGTGTAGTGTTGAA +
Preference number: 5 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGLVSKT*CKCSVE
Trigger: TTCAACACTACACTTGCACAATGTCTTTGAAACCAA...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGATTGGTTTCAAAGACATaGTGCAAGTGTAGTGTTGAA +
Preference number: 5 (lower is better)
Translates to: HRARVLVYARINGLCNRRLVSKT*CKCSVE
Trigger: TTCAACACTACACTTGCACAATGTCTTTGAAACCAA...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGATTGTCATCAATGTATTaGAACACTGTGATGAAGCTC +
Preference number: 5 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGLSSMY*NTVMKL
Trigger: GAGCTTCATCACAGTGTTCAAATACATTGATGACAA...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGATTGTCATCAATGTATTaGAACACTGTGATGAAGCTC +
Preference number: 5 (lower is better)
Translates to: HRARVLVYARINGLCNRRLSSMY*NTVMKL
Trigger: GAGCTTCATCACAGTGTTCAAATACATTGATGACAA...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTGTTTTGCCAGCATTCTaGCGTAGAACTTTTGAAAGA +
Preference number: 5 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFVLPAF*RRTFER
Trigger: TCTTTCAAAAGTTCTACGCAAGAATGCTGGCAAAAC...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTGCTTGCTTTAATTTGTaGATCATGGCTTCTTCAGAG +
Preference number: 5 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFACFNL*IMASSE
Trigger: CTCTGAAGAAGCCATGATCAACAAATTAAAGCAAGC...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTCAGGCTTGCTTTAATTaGTTGATCATGGCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFQACFN*LIMASS
Trigger: TGAAGAAGCCATGATCAACAAATTAAAGCAAGCCTG...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp CACAGAGCTAGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAATTGTTGAACTTATaGTTGAGATCAGCGCTGACA +
Preference number: 5 (lower is better)
Translates to: HRARVLVYARINGLCNRRKLLNL*LRSALT
Trigger: TGTCAGCGCTGATCTCAACAATAAGTTCAACAATTT...TCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCTAGCTCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp GGGAGGCATATAGAAGGAATATGTTGGTATCATAGATTTCCTAAGACTCAGGGAAAATTGTTGAACTTATaGTTGAGATCAGCGCTGACA +
Preference number: 5 (lower is better)
Translates to: GRHIEGICWYHRFPKTQGKLLNL*LRSALT
Trigger: TGTCAGCGCTGATCTCAACAATAAGTTCAACAATTT...TCCCTGAGTCTTAGGAAATCTATGATACCAACATATTCCTTCTATATGCCTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTAAGAAGAACTGCCATTaGGTATGTTGTAACCATGGC +
Preference number: 5 (lower is better)
Translates to: RVLVYARINGLCNRRKTTKKNCH*VCCNHG
Trigger: GCCATGGTTACAACATACCAAATGGCAGTTCTTCTT...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTTGTGCAAGTGTAGTGTaGAAATCTTCTGCAGAAGCA +
Preference number: 5 (lower is better)
Translates to: RVLVYARINGLCNRRKTTCASVV*KSSAEA
Trigger: TGCTTCTGCAGAAGATTTCAACACTACACTTGCACA...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374749.8
ENST00000374754.8
CDS-3UTR CAA 90 bp AAGCATGGTACCCAACCGAATTTCCACTTTTCAGCAATACTTCACTCATTCTTTTTGTCATCAATGTATTaGAACACTGTGATGAAGCTC +
Preference number: 5 (lower is better)
Translates to: KHGTQPNFHFSAILHSFFLSSMY*NTVMKL
Trigger: GAGCTTCATCACAGTGTTCAAATACATTGATGACAA...AAAGAATGAGTGAAGTATTGCTGAAAAGTGGAAATTCGGTTGGGTACCATGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTGTTTTGCCAGCATTCTaGCGTAGAACTTTTGAAAGA +
Preference number: 5 (lower is better)
Translates to: RVLVYARINGLCNRRKTTVLPAF*RRTFER
Trigger: TCTTTCAAAAGTTCTACGCAAGAATGCTGGCAAAAC...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTCATGAATTAAACGTTTaGCCAGCATTCTTGCGTAGA +
Preference number: 5 (lower is better)
Translates to: RVLVYARINGLCNRRKTTHELNV*PAFLRR
Trigger: TCTACGCAAGAATGCTGGCAAAACGTTTAATTCATG...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTCAGGCTTGCTTTAATTaGTTGATCATGGCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: RVLVYARINGLCNRRKTTQACFN*LIMASS
Trigger: TGAAGAAGCCATGATCAACAAATTAAAGCAAGCCTG...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS CCA 90 bp TGTCGTCAAAAGTTTGTTCCATGTTTCATCAAAATCTACTACTCTTaGTTTCAAAGACATTGTGCAAGTGTAGTGTTGAAATCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: CRQKFVPCFIKIYYS*FQRHCASVVLKSVS
Trigger: GGAGACAGATTTCAACACTACACTTGCACAATGTCTTTGAAACCAAGAGTAGTAGATTTTGATGAAACATGGAACAAACTTTTGACGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374751.7
ENST00000626172.2
CDS CCA 90 bp TGTCGTCAAAAGTTTGTTCCATGTTTCATCAAAATCTACTACTCTTaGTTTCAAAGACATTGTGCAAGTGTAGTGTTGAAATCTTCCCTC +
Preference number: 5 (lower is better)
Translates to: CRQKFVPCFIKIYYS*FQRHCASVVLKSSL
Trigger: GAGGGAAGATTTCAACACTACACTTGCACAATGTCTTTGAAACCAAGAGTAGTAGATTTTGATGAAACATGGAACAAACTTTTGACGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374748.5
ENST00000468804.5
CDS CCA 90 bp TGTCGTCAAAAGTTTGTTCCATGTTTCATCAAAATCTACTACTCTTaGTTTCAAAGACATTGTGCAAGTGTAGTGTTGAAATTCCTTGCC +
Preference number: 5 (lower is better)
Translates to: CRQKFVPCFIKIYYS*FQRHCASVVLKFLA
Trigger: GGCAAGGAATTTCAACACTACACTTGCACAATGTCTTTGAAACCAAGAGTAGTAGATTTTGATGAAACATGGAACAAACTTTTGACGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537177.5
CDS-3UTR CAA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTTTGGTTTCAAAGACATaGTGCAAGTGTAGTGTTGAA +
Preference number: 5 (lower is better)
Translates to: RVLVYARINGLCNRRKTTLVSKT*CKCSVE
Trigger: TTCAACACTACACTTGCACAATGTCTTTGAAACCAA...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTTTGTCATCAATGTATTaGAACACTGTGATGAAGCTC +
Preference number: 5 (lower is better)
Translates to: RVLVYARINGLCNRRKTTLSSMY*NTVMKL
Trigger: GAGCTTCATCACAGTGTTCAAATACATTGATGACAA...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS-3UTR CAA 90 bp AGGGTACTAGTCTATGCTAGAATTAATGGATTATGCAACCGAAGAAAGACAACTAAATTGTTGAACTTATaGTTGAGATCAGCGCTGACA +
Preference number: 5 (lower is better)
Translates to: RVLVYARINGLCNRRKTTKLLNL*LRSALT
Trigger: TGTCAGCGCTGATCTCAACAATAAGTTCAACAATTT...AGTTGTCTTTCTTCGGTTGCATAATCCATTAATTCTAGCATAGACTAGTACCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS CCA 90 bp TGTCGTCAAAAGTTTGTTCCATGTTTCATCAAAATCTACTACTCTTaGTTTCAAAGACATTGTGCAAGTGTAGTGTTGAAATCTTCTGCA +
Preference number: 5 (lower is better)
Translates to: CRQKFVPCFIKIYYS*FQRHCASVVLKSSA
Trigger: TGCAGAAGATTTCAACACTACACTTGCACAATGTCTTTGAAACCAAGAGTAGTAGATTTTGATGAAACATGGAACAAACTTTTGACGACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374749.8
ENST00000374754.8
CDS CCA 90 bp TGTCGTCAAAAGTTTGTTCCATGTTTCATCAAAATCTACTACTCTTaGTTTCAAAGACATTGTGCAAGTGTAGTGTTGAAATCTAAGCCA +
Preference number: 5 (lower is better)
Translates to: CRQKFVPCFIKIYYS*FQRHCASVVLKSKP
Trigger: TGGCTTAGATTTCAACACTACACTTGCACAATGTCTTTGAAACCAAGAGTAGTAGATTTTGATGAAACATGGAACAAACTTTTGACGACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000421317.4
ENST00000478044.1
CDS GCA 72 bp GGCGGCGGCGGCGGCGGCTGTCAGCTCGCGTTCCCCTaGTCACAGCGCTGCCATTACTGTGCGCCGAGGCCG +
Preference number: 6 (lower is better)
Translates to: GGGGGGCQLAFP*SQRCHYCAPRP
Trigger: CGGCCTCGGCGCACAGTAATGGCAGCGCTGTGAGCAGGGGAACGCGAGCTGACAGCCGCCGCCGCCGCCGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374748.5
ENST00000374754.8
CDS GCA 72 bp GGCGGCTGTCAGCTCGCGTTCCCCTGCTCACAGCGCTaGCATTACTGTGCGCCGAGGCCGCCTCCCCGGCCG +
Preference number: 6 (lower is better)
Translates to: GGCQLAFPCSQR*HYCAPRPPPRP
Trigger: CGGCCGGGGAGGCGGCCTCGGCGCACAGTAATGGCAGCGCTGTGAGCAGGGGAACGCGAGCTGACAGCCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374748.5
ENST00000374754.8
CDS CCA 72 bp ATCGGGTTGGGGAGGCCCGGGATCCAGTCCAGGGGGTaGCAGGGCTTACGGGTCAGCGCTCTTCTGCAGAAG +
Preference number: 6 (lower is better)
Translates to: IGLGRPGIQSRG*QGLRVSALLQK
Trigger: CTTCTGCAGAAGAGCGCTGACCCGTAAGCCCTGCCACCCCCTGGACTGGATCCCGGGCCTCCCCAACCCGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374748.5
ENST00000673636.1
CDS GCA 72 bp GCCGATCACGGGATCCGTAAAACAATCGTCCTCCTCTaGCTCCGGCTTTGCCCAACACACACCCTCCGGTCT +
Preference number: 6 (lower is better)
Translates to: ADHGIRKTIVLL*LRLCPTHTLRS
Trigger: AGACCGGAGGGTGTGTGTTGGGCAAAGCCGGAGGCAGAGGAGGACGATTGTTTTACGGATCCCGTGATCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374751.7
ENST00000374754.8
ENST00000626172.2
CDS CCA 72 bp CTACAGACAGCATTCAGTTTGGGCTCAACTGCAACATaGCACCCAAGCTTCCTCTCCTCCTGGTACTCCCTA +
Preference number: 6 (lower is better)
Translates to: LQTAFSLGSTAT*HPSFLSSWYSL
Trigger: TAGGGAGTACCAGGAGGAGAGGAAGCTTGGGTGCCATGTTGCAGTTGAGCCCAAACTGAATGCTGTCTGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537177.5
CDS GCA 72 bp TTTCCTTCTACAGACAGCATTCAGTTTGGGCTCAACTaGAACATGGCACCCAAGCTTCCTCTCCTCCTGGTA +
Preference number: 6 (lower is better)
Translates to: FPSTDSIQFGLN*NMAPKLPLLLV
Trigger: TACCAGGAGGAGAGGAAGCTTGGGTGCCATGTTGCAGTTGAGCCCAAACTGAATGCTGTCTGTAGAAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537177.5
CDS GCA 72 bp GGTGGTTATACTCCAGACTGTTCCATGATAAAGCTATaGCATCTTATCAGTACGATGACCACCACCAAGTGT +
Preference number: 6 (lower is better)
Translates to: GGYTPDCSMIKL*HLISTMTTTKC
Trigger: ACACTTGGTGGTGGTCATCGTACTGATAAGATGGCATAGCTTTATCATGGAACAGTCTGGAGTATAACCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478044.1
CDS TCA 72 bp GGTCATTCCATGTTGCTCTTTCGACGTATTCCAACATaGCCACGGCTTTTATTGTCGTCAAAAGTTTGTTCC +
Preference number: 6 (lower is better)
Translates to: GHSMLLFRRIPT*PRLLLSSKVCS
Trigger: GGAACAAACTTTTGACGACAATAAAAGCCGTGGTCATGTTGGAATACGTCGAAAGAGCAACATGGAATGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000374746.5
ENST00000374748.5
ENST00000374749.8
ENST00000374751.7
ENST00000374754.8
ENST00000421317.4
ENST00000468804.5
ENST00000478044.1
ENST00000537177.5
ENST00000626172.2
ENST00000673636.1
CDS TCA 72 bp ACCACCACCAAGTGTCTCCAAGGTAAAGATAATGAATaGGAAACGGTCATTCCATGTTGCTCTTTCGACGTA +
Preference number: 6 (lower is better)
Translates to: TTTKCLQGKDNE*ETVIPCCSFDV
Trigger: TACGTCGAAAGAGCAACATGGAATGACCGTTTCTCATTCATTATCTTTACCTTGGAGACACTTGGTGGTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478044.1
CDS TCA 72 bp TGGTCTCCTTGTGTCTCTCTTCTCCAATCAACAGTCTaGTTCTCAATCAGACCTCTCAGTTTAGAAGAGTTC +
Preference number: 6 (lower is better)
Translates to: WSPCVSLLQSTV*FSIRPLSLEEF
Trigger: GAACTCTTCTAAACTGAGAGGTCTGATTGAGAATCAGACTGTTGATTGGAGAAGAGAGACACAAGGAGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673636.1
CDS CAA 72 bp CCAAGCTCTGAGGATACAGTGGACAAAACAAAGTTCTaGACTTCAAGATCAGAATCTCAGATCTTGCCCTTA +
Preference number: 6 (lower is better)
Translates to: PSSEDTVDKTKF*TSRSESQILPL
Trigger: TAAGGGCAAGATCTGAGATTCTGATCTTGAAGTCAAGAACTTTGTTTTGTCCACTGTATCCTCAGAGCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537177.5
CDS CAA 90 bp TGTTCCATGTTTCATCAAAATCTACTACTCTTGGTTTCAAAGACATaGTGCAAGTGTAGTGTTGAAATCTTCTGCAGAAGCAGGGCAAGG +
Preference number: 6 (lower is better)
Translates to: CSMFHQNLLLLVSKT*CKCSVEIFCRSRAR
Trigger: CCTTGCCCTGCTTCTGCAGAAGATTTCAACACTACACTTGCACAATGTCTTTGAAACCAAGAGTAGTAGATTTTGATGAAACATGGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374749.8
ENST00000374754.8
CDS CAA 90 bp TGTTCCATGTTTCATCAAAATCTACTACTCTTGGTTTCAAAGACATaGTGCAAGTGTAGTGTTGAAATCTGTCTCCGCGAGGAAAGACAG +
Preference number: 6 (lower is better)
Translates to: CSMFHQNLLLLVSKT*CKCSVEICLREERQ
Trigger: CTGTCTTTCCTCGCGGAGACAGATTTCAACACTACACTTGCACAATGTCTTTGAAACCAAGAGTAGTAGATTTTGATGAAACATGGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374751.7
ENST00000626172.2
CDS CAA 90 bp TGTTCCATGTTTCATCAAAATCTACTACTCTTGGTTTCAAAGACATaGTGCAAGTGTAGTGTTGAAATCTTAACCCTCCACAGCCACTGC +
Preference number: 6 (lower is better)
Translates to: CSMFHQNLLLLVSKT*CKCSVEILTLHSHC
Trigger: GCAGTGGCTGTGGAGGGTTAAGATTTCAACACTACACTTGCACAATGTCTTTGAAACCAAGAGTAGTAGATTTTGATGAAACATGGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673636.1
CDS CAA 90 bp TGTTCCATGTTTCATCAAAATCTACTACTCTTGGTTTCAAAGACATaGTGCAAGTGTAGTGTTGAAATTCCTTGCCAGGCACCATTCCAA +
Preference number: 6 (lower is better)
Translates to: CSMFHQNLLLLVSKT*CKCSVEIPCQAPFQ
Trigger: TTGGAATGGTGCCTGGCAAGGAATTTCAACACTACACTTGCACAATGTCTTTGAAACCAAGAGTAGTAGATTTTGATGAAACATGGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537177.5
CDS CAA 90 bp TGTTCCATGTTTCATCAAAATCTACTACTCTTGGTTTCAAAGACATaGTGCAAGTGTAGTGTTGAAATCTTCCCTCCTTCGAAGGAAAAT +
Preference number: 6 (lower is better)
Translates to: CSMFHQNLLLLVSKT*CKCSVEIFPPSKEN
Trigger: ATTTTCCTTCGAAGGAGGGAAGATTTCAACACTACACTTGCACAATGTCTTTGAAACCAAGAGTAGTAGATTTTGATGAAACATGGAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374748.5
ENST00000468804.5