Pregenerated sensors for CUL1 (Homo sapiens)
Ensembl gene IDs: ENSG00000055130Ensembl transcript IDs: ENST00000325222.9, ENST00000409469.5, ENST00000602748.5, ENST00000655324.1, ENST00000656001.1, ENST00000660240.1, ENST00000662132.1, ENST00000662670.1, ENST00000662716.1, ENST00000663044.1, ENST00000663835.1, ENST00000665936.1, ENST00000666124.1, ENST00000671397.1, ENST00000671421.1
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTTTTTCGACTTAGAAGGAGGAACTCCAGCTCCTCGTGCTTGGTTTaGCTGGTGAACAAGTTCTGGAGACTAGAGGTCCGAGCTCAAGGT | + |
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Preference number: 1 (lower is better) Translates to: LFRLRRRNSSSSCLV*LVNKFWRLEVRAQG Trigger: ACCTTGAGCTCGGACCTCTAGTCTCCAGAACTTGTTCACCAGTCAAACCAAGCACGAGGAGCTGGAGTTCCTCCTTCTAAGTCGAAAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000671421.1 |
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| 3UTR-3UTR GCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGCTTAGTGCGGTAGCATaGAGCCCTCGGCACGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: CCQDDSCESGSPCIDLVRLSAVA*SPRHGG Trigger: CCCTCCGTGCCGAGGGCTGCATGCTACCGCACTAAG...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000325222.9 ENST00000602748.5 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662132.1 ENST00000662670.1 ENST00000662716.1 ENST00000663044.1 ENST00000663835.1 ENST00000665936.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
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| 3UTR-3UTR GCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGTGCCAAGACGACAGCTaGGAATCGGGGAGCCCATGT | + |
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Preference number: 2 (lower is better) Translates to: CCQDDSCESGSPCIDLVRCQDDS*ESGSPC Trigger: ACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCA...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 14 transcripts: ENST00000325222.9 ENST00000602748.5 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662132.1 ENST00000662670.1 ENST00000662716.1 ENST00000663044.1 ENST00000663835.1 ENST00000665936.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
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| 3UTR-3UTR TCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGGGGGAGCCCATGTATTaGCTTAGTGCGGTAGCATGC | + |
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Preference number: 2 (lower is better) Translates to: CCQDDSCESGSPCIDLVRGEPMY*LSAVAC Trigger: GCATGCTACCGCACTAAGTCAATACATGGGCTCCCC...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 14 transcripts: ENST00000325222.9 ENST00000602748.5 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662132.1 ENST00000662670.1 ENST00000662716.1 ENST00000663044.1 ENST00000663835.1 ENST00000665936.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
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| 3UTR-3UTR GCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGTGCCAACGTGACAAGTaGTGCCAAGACGACAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: CCQDDSCESGSPCIDLVRCQRDK*CQDDSC Trigger: GCAGCTGTCGTCTTGGCAGCACTTGTCACGTTGGCA...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000325222.9 ENST00000602748.5 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662132.1 ENST00000662670.1 ENST00000662716.1 ENST00000663044.1 ENST00000663835.1 ENST00000665936.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
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| 3UTR-3UTR GCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGCCAGGAGGCGGAGGTTaGAATGAGCCAAGATTGCAC | + |
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Preference number: 2 (lower is better) Translates to: CCQDDSCESGSPCIDLVRPGGGG*NEPRLH Trigger: GTGCAATCTTGGCTCATTGCAACCTCCGCCTCCTGG...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671421.1 |
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| 3UTR-3UTR TCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGGGTATGAGAATTGCTTaGACCCAGGAGGCGGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: CCQDDSCESGSPCIDLVRGMRIA*TQEAEV Trigger: AACCTCCGCCTCCTGGGTTCAAGCAATTCTCATACC...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671421.1 |
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| 3UTR-3UTR GCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGCAACGTGACAAGTGCTaGCAAGACGACAGCTGCGAA | + |
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Preference number: 2 (lower is better) Translates to: CCQDDSCESGSPCIDLVRQRDKC*QDDSCE Trigger: TTCGCAGCTGTCGTCTTGGCAGCACTTGTCACGTTG...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000325222.9 ENST00000602748.5 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662132.1 ENST00000662670.1 ENST00000662716.1 ENST00000663044.1 ENST00000663835.1 ENST00000665936.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
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| 3UTR-3UTR GCA 90 bp | GTTCTGGAGACTAGAGGTCCGAGCTCAAGGTACTGTCAGGGTTGGTTTCTGGTGGCTCTCTTCCAGGGTTaGAGACGGCCACCTTCTCAC | + |
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Preference number: 2 (lower is better) Translates to: VLETRGPSSRYCQGWFLVALFQG*RRPPSH Trigger: GTGAGAAGGTGGCCGTCTGCAACCCTGGAAGAGAGC...CACCAGAAACCAACCCTGACAGTACCTTGAGCTCGGACCTCTAGTCTCCAGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671421.1 |
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| 3UTR-3UTR TCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGTCCTCGTGCTTGGTTTaGCTGGTGAACAAGTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: CCQDDSCESGSPCIDLVRSSCLV*LVNKFW Trigger: CCAGAACTTGTTCACCAGTCAAACCAAGCACGAGGA...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671421.1 |
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| 3UTR-3UTR CAA 90 bp | GTTCTGGAGACTAGAGGTCCGAGCTCAAGGTACTGTCAGGGTTGGTTTCTGGTGGGCTCTCTTCCAGGGTaGCAGACGGCCACCTTCTCA | + |
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Preference number: 3 (lower is better) Translates to: VLETRGPSSRYCQGWFLVGSLPG*QTATFS Trigger: TGAGAAGGTGGCCGTCTGCAACCCTGGAAGAGAGCC...CACCAGAAACCAACCCTGACAGTACCTTGAGCTCGGACCTCTAGTCTCCAGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671421.1 |
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| 3UTR-3UTR CAA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGCTCCTCGTGCTTGGTTaGACTGGTGAACAAGTTCTG | + |
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Preference number: 3 (lower is better) Translates to: CCQDDSCESGSPCIDLVRLLVLG*TGEQVL Trigger: CAGAACTTGTTCACCAGTCAAACCAAGCACGAGGAG...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671421.1 |
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| 3UTR-3UTR CAA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGCTGGCTGCTATGAACTaGAGTTGTTTTCATTCTTTC | + |
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Preference number: 3 (lower is better) Translates to: CCQDDSCESGSPCIDLVRLAAMN*SCFHSF Trigger: GAAAGAATGAAAACAACTCAAGTTCATAGCAGCCAG...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 14 transcripts: ENST00000325222.9 ENST00000602748.5 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662132.1 ENST00000662670.1 ENST00000662716.1 ENST00000663044.1 ENST00000663835.1 ENST00000665936.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
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| CDS-3UTR CCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGCCTCCGCCTGGTCCCTaGGCCTGGGCCCCGGCGAAA | + |
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Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRPPPGP*AWAPAK Trigger: TTTCGCCGGGGCCCAGGCCCAGGGACCAGGCGGAGG...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000325222.9 ENST00000655324.1 ENST00000656001.1 ENST00000662132.1 ENST00000662670.1 ENST00000663835.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
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| CDS-3UTR GCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGCTCAGCTACCGGGGCTaGCCCGCCTGGAGCTGCGTG | + |
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Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRLSYRG*PAWSCV Trigger: CACGCAGCTCCAGGCGGGGCAGCCCCGGTAGCTGAG...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000655324.1 ENST00000663835.1 |
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| CDS-3UTR CCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGCGGGGGAGAAGCTGTTaGGGGAGGGCCGGAACGCAC | + |
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Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRRGRSC*GRAGTH Trigger: GTGCGTTCCGGCCCTCCCCCAACAGCTTCTCCCCCG...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000602748.5 |
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| CDS-3UTR GCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGCCGCCAAGGTCTAGCTaGGTCCCTCAGCTACCGGGG | + |
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Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRPPRSS*VPQLPG Trigger: CCCCGGTAGCTGAGGGACGCAGCTAGACCTTGGCGG...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000325222.9 ENST00000655324.1 ENST00000656001.1 ENST00000662132.1 ENST00000663835.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
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| CDS-3UTR GCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGCCCGCATCTCTGTGGTaGCCCAAAGGCTCCCGCGAC | + |
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Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRPASLW*PKGSRD Trigger: GTCGCGGGAGCCTTTGGGGCACCACAGAGATGCGGG...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000325222.9 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662132.1 ENST00000662670.1 ENST00000663835.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
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| CDS-3UTR GCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGCATTGCAGGCAAACCTaGGAGCCTGCGGCCCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRHCRQT*EPAAPA Trigger: GGCAGGGGCCGCAGGCTCGCAGGTTTGCCTGCAATG...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665936.1 |
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| CDS-3UTR TCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGGCTGGATGCCGGCTCTaGGGTCGTCCCAGATCTGGT | + |
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Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRAGCRL*GRPRSG Trigger: ACCAGATCTGGGACGACCTCAGAGCCGGCATCCAGC...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000325222.9 ENST00000602748.5 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662132.1 ENST00000662670.1 ENST00000662716.1 ENST00000663044.1 ENST00000663835.1 ENST00000665936.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
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| CDS-3UTR CCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGGACCGGGACAGGGACTaGGGGTTGCACCCCAGATCA | + |
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Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRDRDRD*GLHPRS Trigger: TGATCTGGGGTGCAACCCCCAGTCCCTGTCCCGGTC...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000662716.1 |
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| CDS-3UTR GCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGTGGTCCAGGCCAATCTaGTTCAGGCCGTGGGGGTTC | + |
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Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRWSRPI*FRPWGF Trigger: GAACCCCCACGGCCTGAAGCAGATTGGCCTGGACCA...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 14 transcripts: ENST00000325222.9 ENST00000602748.5 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662132.1 ENST00000662670.1 ENST00000662716.1 ENST00000663044.1 ENST00000663835.1 ENST00000665936.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
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| CDS-3UTR GCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGTGCCGTGTGTACACCTaGTGGATGCCGGCTCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRCRVYT*WMPALR Trigger: CCTCAGAGCCGGCATCCAGCAGGTGTACACACGGCA...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000325222.9 ENST00000602748.5 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662132.1 ENST00000662670.1 ENST00000662716.1 ENST00000663044.1 ENST00000663835.1 ENST00000665936.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
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| CDS-3UTR CCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGAAACCCGCATCTCTGTaGTGCCCCAAAGGCTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRKPASL*CPKGSR Trigger: GCGGGAGCCTTTGGGGCACCACAGAGATGCGGGTTT...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000325222.9 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662132.1 ENST00000662670.1 ENST00000663835.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
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| CDS-3UTR CCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGAGGCCGTGGGGGTTCTaGCTCCGGGTTGACGACATT | + |
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Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRRPWGF*LRVDDI Trigger: AATGTCGTCAACCCGGAGCCAGAACCCCCACGGCCT...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 14 transcripts: ENST00000325222.9 ENST00000602748.5 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662132.1 ENST00000662670.1 ENST00000662716.1 ENST00000663044.1 ENST00000663835.1 ENST00000665936.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
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| CDS-3UTR CCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGTCAGAAAGTCAGAGGTaGCCCTCCGAATCGGCGCGG | + |
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Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRSESQR*PSESAR Trigger: CCGCGCCGATTCGGAGGGCCACCTCTGACTTTCTGA...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662716.1 |
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| CDS-3UTR GCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGGACTTGGCCATGCTCTaGCGTGTGTACACCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRDLAML*RVYTCW Trigger: CCAGCAGGTGTACACACGGCAGAGCATGGCCAAGTC...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000325222.9 ENST00000602748.5 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662132.1 ENST00000662670.1 ENST00000662716.1 ENST00000663044.1 ENST00000663835.1 ENST00000665936.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
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| CDS-3UTR GCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGGACCCCCTTACCACCTaGAAGGCCTTAGGAATCGGC | + |
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Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRDPLTT*KALGIG Trigger: GCCGATTCCTAAGGCCTTGCAGGTGGTAAGGGGGTC...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000662716.1 |
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| CDS-3UTR TCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGCTCACGATGGCCGCCTaGATCAGTAGTTTGCGGTCT | + |
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Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRLTMAA*ISSLRS Trigger: AGACCGCAAACTACTGATTCAGGCGGCCATCGTGAG...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000325222.9 ENST00000602748.5 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662132.1 ENST00000662670.1 ENST00000662716.1 ENST00000663044.1 ENST00000663835.1 ENST00000665936.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
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| CDS-3UTR TCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGTGGAGGACAGCTGAGTaGGGACCTCGCCAAGTAACT | + |
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Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRWRTAE*GPRQVT Trigger: AGTTACTTGGCGAGGTCCTCACTCAGCTGTCCTCCA...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000325222.9 ENST00000602748.5 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662132.1 ENST00000662670.1 ENST00000662716.1 ENST00000663044.1 ENST00000663835.1 ENST00000665936.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
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| CDS-3UTR TCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGAGGGTTGGTTTCTGGTaGGGGCTCTCTTCCAGGGTT | + |
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Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRRVGFW*GLSSRV Trigger: AACCCTGGAAGAGAGCCCTCACCAGAAACCAACCCT...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671421.1 |
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| CDS-3UTR GCA 90 bp | GTTCTGGAGACTAGAGGTCCGAGCTCAAGGTACTGTCAGGGTTGGTTTCTGGTGTGCCGTGTGTACACCTaGTGGATGCCGGCTCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: VLETRGPSSRYCQGWFLVCRVYT*WMPALR Trigger: CCTCAGAGCCGGCATCCAGCAGGTGTACACACGGCA...CACCAGAAACCAACCCTGACAGTACCTTGAGCTCGGACCTCTAGTCTCCAGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671421.1 |
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| CDS-3UTR GCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGACAGGGACTGGGGGTTaGACCCCAGATCAGAAAGTC | + |
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Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRTGTGG*TPDQKV Trigger: GACTTTCTGATCTGGGGTGCAACCCCCAGTCCCTGT...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000662716.1 |
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| CDS-3UTR CCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGGGTGGACGAGCCTCTTaGCGAGCATCTTCGCATAGA | + |
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Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRGGRAS*RASSHR Trigger: TCTATGCGAAGATGCTCGCCAAGAGGCTCGTCCACC...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENST00000325222.9 ENST00000602748.5 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662132.1 ENST00000662670.1 ENST00000662716.1 ENST00000663044.1 ENST00000665936.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
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| CDS-3UTR TCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGGAATGTCGACGCCTCTaGCGGCAAGGCAAATGTACA | + |
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Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRECRRL*RQGKCT Trigger: TGTACATTTGCCTTGCCGTCAGAGGCGTCGACATTC...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666124.1 |
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| CDS-3UTR GCA 90 bp | GTTCTGGAGACTAGAGGTCCGAGCTCAAGGTACTGTCAGGGTTGGTTTCTGGTGGACTTGGCCATGCTCTaGCGTGTGTACACCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLETRGPSSRYCQGWFLVDLAML*RVYTCW Trigger: CCAGCAGGTGTACACACGGCAGAGCATGGCCAAGTC...CACCAGAAACCAACCCTGACAGTACCTTGAGCTCGGACCTCTAGTCTCCAGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671421.1 |
||
| CDS-3UTR GCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGATCTGGACTTGGCCATaGTCTGCCGTGTGTACACCT | + |
|
Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRIWTWP*SAVCTP Trigger: AGGTGTACACACGGCAGAGCATGGCCAAGTCCAGAT...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000325222.9 ENST00000602748.5 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662132.1 ENST00000662670.1 ENST00000662716.1 ENST00000663044.1 ENST00000663835.1 ENST00000665936.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
||
| CDS-3UTR GCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGTTCGGCATCGTCACTTaGACTGTTCTGGTGGACGAG | + |
|
Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRFGIVT*TVLVDE Trigger: CTCGTCCACCAGAACAGTGCAAGTGACGATGCCGAA...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000325222.9 ENST00000602748.5 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662132.1 ENST00000662670.1 ENST00000662716.1 ENST00000663044.1 ENST00000665936.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
||
| CDS-3UTR GCA 90 bp | GTTCTGGAGACTAGAGGTCCGAGCTCAAGGTACTGTCAGGGTTGGTTTCTGGTGTGCCAAGACGACAGCTaGGAATCGGGGAGCCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: VLETRGPSSRYCQGWFLVCQDDS*ESGSPC Trigger: ACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCA...CACCAGAAACCAACCCTGACAGTACCTTGAGCTCGGACCTCTAGTCTCCAGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671421.1 |
||
| CDS-3UTR CCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGAGCAGGATAGCCATCTaGAATGTCGACGCCTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRSRIAI*NVDASD Trigger: GTCAGAGGCGTCGACATTCCAGATGGCTATCCTGCT...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666124.1 |
||
| CDS-3UTR TCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGTCTTCCGTGTTGTACTaGAGCAGGATAGCCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRSSVLY*SRIAIW Trigger: CCAGATGGCTATCCTGCTTCAGTACAACACGGAAGA...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000325222.9 ENST00000602748.5 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662132.1 ENST00000662670.1 ENST00000662716.1 ENST00000663044.1 ENST00000663835.1 ENST00000665936.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
||
| CDS-3UTR TCA 90 bp | GTTCTGGAGACTAGAGGTCCGAGCTCAAGGTACTGTCAGGGTTGGTTTCTGGTGGGGGAGCCCATGTATTaGCTTAGTGCGGTAGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: VLETRGPSSRYCQGWFLVGEPMY*LSAVAC Trigger: GCATGCTACCGCACTAAGTCAATACATGGGCTCCCC...CACCAGAAACCAACCCTGACAGTACCTTGAGCTCGGACCTCTAGTCTCCAGAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000671421.1 |
||
| CDS-3UTR GCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGGCTCCTCCAGGTGTCTaGCCCTTTTTCGACTTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRAPPGV*PFFDLE Trigger: TTCTAAGTCGAAAAAGGGGCAGACACCTGGAGGAGC...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 14 transcripts: ENST00000325222.9 ENST00000602748.5 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662132.1 ENST00000662670.1 ENST00000662716.1 ENST00000663044.1 ENST00000663835.1 ENST00000665936.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
||
| CDS-3UTR GCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGAGAATGAAATCTCATTaGAGGCAAACCGGCTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRRMKSH*RQTGSG Trigger: GCCGGAGCCGGTTTGCCTGCAATGAGATTTCATTCT...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602748.5 |
||
| CDS-3UTR CCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGCCATATATCTGGACTTaGCCATGCTCTGCCGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRPYIWT*PCSAVC Trigger: ACACACGGCAGAGCATGGCCAAGTCCAGATATATGG...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000325222.9 ENST00000602748.5 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662132.1 ENST00000662670.1 ENST00000662716.1 ENST00000663044.1 ENST00000663835.1 ENST00000665936.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
||
| CDS-3UTR CCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGAGAGCTCCATATATCTaGACTTGGCCATGCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRRAPYI*TWPCSA Trigger: GGCAGAGCATGGCCAAGTCCAGATATATGGAGCTCT...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000325222.9 ENST00000602748.5 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662132.1 ENST00000662670.1 ENST00000662716.1 ENST00000663044.1 ENST00000663835.1 ENST00000665936.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
||
| CDS-3UTR CCA 90 bp | GTTCTGGAGACTAGAGGTCCGAGCTCAAGGTACTGTCAGGGTTGGTTTCTGGTGGGTGGACGAGCCTCTTaGCGAGCATCTTCGCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: VLETRGPSSRYCQGWFLVGGRAS*RASSHR Trigger: TCTATGCGAAGATGCTCGCCAAGAGGCTCGTCCACC...CACCAGAAACCAACCCTGACAGTACCTTGAGCTCGGACCTCTAGTCTCCAGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671421.1 |
||
| CDS-3UTR CCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGACTTGGAGATCATGCTaGCTTCGGCATCGTCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRTWRSC*LRHRHL Trigger: CAAGTGACGATGCCGAAGCCAGCATGATCTCCAAGT...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000325222.9 ENST00000602748.5 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662132.1 ENST00000662670.1 ENST00000662716.1 ENST00000663044.1 ENST00000665936.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
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| CDS-3UTR CCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGAGCAGGATAGCCATCTaGAATGTCGACGCCTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRSRIAI*NVDACK Trigger: TTTGCAGGCGTCGACATTCCAGATGGCTATCCTGCT...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000325222.9 ENST00000602748.5 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662132.1 ENST00000662670.1 ENST00000662716.1 ENST00000663044.1 ENST00000663835.1 ENST00000665936.1 ENST00000671397.1 ENST00000671421.1 |
||
| CDS-3UTR TCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGTCCTCGTGCTTGGTTTaGCTGGTGAACACTAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRSSCLV*LVNTST Trigger: TGTACTAGTGTTCACCAGTCAAACCAAGCACGAGGA...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000325222.9 ENST00000602748.5 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662132.1 ENST00000662670.1 ENST00000662716.1 ENST00000663044.1 ENST00000663835.1 ENST00000665936.1 ENST00000666124.1 ENST00000671397.1 |
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| CDS-3UTR TCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGGTTTATTCAGTGGCCTaGACAGACAGTCTCTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRVYSVA*TDSLSK Trigger: CTTGGAGAGACTGTCTGTTCAGGCCACTGAATAAAC...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000325222.9 ENST00000602748.5 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662670.1 ENST00000662716.1 ENST00000663044.1 ENST00000663835.1 ENST00000665936.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
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| CDS-3UTR TCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGACTACGTTCCAACTCTaGCGGCAAGGCAAATGTACA | + |
|
Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRTTFQL*RQGKCT Trigger: TGTACATTTGCCTTGCCGTCAGAGTTGGAACGTAGT...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000325222.9 ENST00000602748.5 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662132.1 ENST00000662670.1 ENST00000662716.1 ENST00000663044.1 ENST00000663835.1 ENST00000665936.1 ENST00000671397.1 ENST00000671421.1 |
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| CDS-3UTR TCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGCCGCAAGCTTGCACTTaGTTGAGTGTGTCTTCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRPQACT*LSVSSS Trigger: ACTAGAAGACACACTCAATCAAGTGCAAGCTTGCGG...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663835.1 |
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| CDS-3UTR GCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGTTAACTTGGAGATCATaGTGGCTTCGGCATCGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRLTWRS*WLRHRH Trigger: GTGACGATGCCGAAGCCAGCATGATCTCCAAGTTAA...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000325222.9 ENST00000602748.5 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662132.1 ENST00000662670.1 ENST00000662716.1 ENST00000663044.1 ENST00000665936.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
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| CDS-3UTR GCA 90 bp | GTTCTGGAGACTAGAGGTCCGAGCTCAAGGTACTGTCAGGGTTGGTTTCTGGTGCAACGTGACAAGTGCTaGCAAGACGACAGCTGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: VLETRGPSSRYCQGWFLVQRDKC*QDDSCE Trigger: TTCGCAGCTGTCGTCTTGGCAGCACTTGTCACGTTG...CACCAGAAACCAACCCTGACAGTACCTTGAGCTCGGACCTCTAGTCTCCAGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671421.1 |
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| CDS-3UTR GCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGAGAATGAAATCTCATTaGAGGCAAACCGCCATCGGC | + |
|
Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRRMKSH*RQTAIG Trigger: GCCGATGGCGGTTTGCCTGCAATGAGATTTCATTCT...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663044.1 |
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| CDS-3UTR CCA 90 bp | GTTCTGGAGACTAGAGGTCCGAGCTCAAGGTACTGTCAGGGTTGGTTTCTGGTGAGGTACTGTCAGGGTTaGTTTCTGGTGAGGGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VLETRGPSSRYCQGWFLVRYCQG*FLVRAL Trigger: GAGAGCCCTCACCAGAAACCAACCCTGACAGTACCT...CACCAGAAACCAACCCTGACAGTACCTTGAGCTCGGACCTCTAGTCTCCAGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671421.1 |
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| CDS-3UTR TCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGTCAGCACTTGAATGCTaGAATCCAAGTCTAGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRSALEC*NPSLGV Trigger: AACCCCTAGACTTGGATTTCAGCATTCAAGTGCTGA...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 14 transcripts: ENST00000325222.9 ENST00000602748.5 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662132.1 ENST00000662670.1 ENST00000662716.1 ENST00000663044.1 ENST00000663835.1 ENST00000665936.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
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| CDS-3UTR GCA 90 bp | GTTCTGGAGACTAGAGGTCCGAGCTCAAGGTACTGTCAGGGTTGGTTTCTGGTGGCTCCTCCAGGTGTCTaGCCCTTTTTCGACTTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VLETRGPSSRYCQGWFLVAPPGV*PFFDLE Trigger: TTCTAAGTCGAAAAAGGGGCAGACACCTGGAGGAGC...CACCAGAAACCAACCCTGACAGTACCTTGAGCTCGGACCTCTAGTCTCCAGAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000671421.1 |
||
| CDS-3UTR GCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGTCGAACCCGCAAGCTTaGTTTAACTTGGAGATCATG | + |
|
Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRSNPQA*FNLEIM Trigger: CATGATCTCCAAGTTAAAGCAAGCTTGCGGGTTCGA...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000325222.9 ENST00000602748.5 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662132.1 ENST00000662670.1 ENST00000662716.1 ENST00000663044.1 ENST00000665936.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
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| CDS-3UTR GCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGAGAATGAAATCTCATTaGAGGCAAACCTGCGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRRMKSH*RQTCEP Trigger: AGGCTCGCAGGTTTGCCTGCAATGAGATTTCATTCT...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665936.1 |
||
| CDS-3UTR CCA 90 bp | GTTCTGGAGACTAGAGGTCCGAGCTCAAGGTACTGTCAGGGTTGGTTTCTGGTGCCATATATCTGGACTTaGCCATGCTCTGCCGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VLETRGPSSRYCQGWFLVPYIWT*PCSAVC Trigger: ACACACGGCAGAGCATGGCCAAGTCCAGATATATGG...CACCAGAAACCAACCCTGACAGTACCTTGAGCTCGGACCTCTAGTCTCCAGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671421.1 |
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| CDS-3UTR CCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGCCTCCTCTGGGTTCTTaGAACTTTTCTTCAACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRPPLGS*NFSSTR Trigger: CCTTGTTGAAGAAAAGTTCCAAGAACCCAGAGGAGG...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 14 transcripts: ENST00000325222.9 ENST00000602748.5 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662132.1 ENST00000662670.1 ENST00000662716.1 ENST00000663044.1 ENST00000663835.1 ENST00000665936.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
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| CDS-3UTR TCA 90 bp | GTTCTGGAGACTAGAGGTCCGAGCTCAAGGTACTGTCAGGGTTGGTTTCTGGTGGTTTATTCAGTGGCCTaGACAGACAGTCTCTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VLETRGPSSRYCQGWFLVVYSVA*TDSLSK Trigger: CTTGGAGAGACTGTCTGTTCAGGCCACTGAATAAAC...CACCAGAAACCAACCCTGACAGTACCTTGAGCTCGGACCTCTAGTCTCCAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671421.1 |
||
| CDS-3UTR TCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGAAGCTTGCACTTGATTaGGTGTGTCTTCTAGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRKLALD*VCLLVL Trigger: CAGAACTAGAAGACACACTCAATCAAGTGCAAGCTT...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663835.1 |
||
| CDS-3UTR GCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGAGAATGAAATCTCATTaGAGGCAAACCCGCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRRMKSH*RQTRIS Trigger: AGAGATGCGGGTTTGCCTGCAATGAGATTTCATTCT...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000325222.9 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662132.1 ENST00000662670.1 ENST00000663835.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
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| CDS-3UTR GCA 90 bp | GTTCTGGAGACTAGAGGTCCGAGCTCAAGGTACTGTCAGGGTTGGTTTCTGGTGTTAACTTGGAGATCATaGTGGCTTCGGCATCGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VLETRGPSSRYCQGWFLVLTWRS*WLRHRH Trigger: GTGACGATGCCGAAGCCAGCATGATCTCCAAGTTAA...CACCAGAAACCAACCCTGACAGTACCTTGAGCTCGGACCTCTAGTCTCCAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671421.1 |
||
| CDS-3UTR TCA 90 bp | GTTCTGGAGACTAGAGGTCCGAGCTCAAGGTACTGTCAGGGTTGGTTTCTGGTGTCAGCACTTGAATGCTaGAATCCAAGTCTAGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VLETRGPSSRYCQGWFLVSALEC*NPSLGV Trigger: AACCCCTAGACTTGGATTTCAGCATTCAAGTGCTGA...CACCAGAAACCAACCCTGACAGTACCTTGAGCTCGGACCTCTAGTCTCCAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671421.1 |
||
| CDS-3UTR GCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGAAGCAGACGAGCCTCTaGCTTTTTCATATATTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRKQTSL*LFHIFS Trigger: ACTGAATATATGAAAAAGGCAGAGGCTCGTCTGCTT...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 11 transcripts: ENST00000325222.9 ENST00000602748.5 ENST00000656001.1 ENST00000662132.1 ENST00000662670.1 ENST00000662716.1 ENST00000663044.1 ENST00000663835.1 ENST00000665936.1 ENST00000666124.1 ENST00000671421.1 |
||
| CDS-3UTR GCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGTGGAATGTCGACGCCTaGAAAGTATATCTGTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRWNVDA*KVYLFL Trigger: CAAAAACAGATATACTTTGCAGGCGTCGACATTCCA...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 13 transcripts: ENST00000325222.9 ENST00000602748.5 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662132.1 ENST00000662670.1 ENST00000662716.1 ENST00000663044.1 ENST00000663835.1 ENST00000665936.1 ENST00000671397.1 ENST00000671421.1 |
||
| CDS-3UTR GCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGAGAATGAAATCTCATTaGAGGCAAACCTTTGTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRRMKSH*RQTFVD Trigger: GTCGACAAAGGTTTGCCTGCAATGAGATTTCATTCT...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662716.1 |
||
| CDS-3UTR TCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGTTGTCAAGTGCTTTTTaGATTGCTCGTTCAGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRLSSAF*IARSDL Trigger: AAGATCTGAACGAGCAATTCAAAAAGCACTTGACAA...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 14 transcripts: ENST00000325222.9 ENST00000602748.5 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662132.1 ENST00000662670.1 ENST00000662716.1 ENST00000663044.1 ENST00000663835.1 ENST00000665936.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
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| CDS-3UTR GCA 90 bp | GTTCTGGAGACTAGAGGTCCGAGCTCAAGGTACTGTCAGGGTTGGTTTCTGGTGAGAATGAAATCTCATTaGAGGCAAACCCGCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VLETRGPSSRYCQGWFLVRMKSH*RQTRIS Trigger: AGAGATGCGGGTTTGCCTGCAATGAGATTTCATTCT...CACCAGAAACCAACCCTGACAGTACCTTGAGCTCGGACCTCTAGTCTCCAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671421.1 |
||
| CDS-3UTR GCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGTCTCCAAGTCACCAATaGAAGCGAATAGATTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRSPSHQ*KRIDFI Trigger: TATGAAATCTATTCGCTTGCATTGGTGACTTGGAGA...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000325222.9 ENST00000602748.5 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662670.1 ENST00000662716.1 ENST00000663044.1 ENST00000663835.1 ENST00000665936.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
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| CDS-3UTR GCA 90 bp | GTTCTGGAGACTAGAGGTCCGAGCTCAAGGTACTGTCAGGGTTGGTTTCTGGTGAAGCAGACGAGCCTCTaGCTTTTTCATATATTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VLETRGPSSRYCQGWFLVKQTSL*LFHIFS Trigger: ACTGAATATATGAAAAAGGCAGAGGCTCGTCTGCTT...CACCAGAAACCAACCCTGACAGTACCTTGAGCTCGGACCTCTAGTCTCCAGAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000671421.1 |
||
| CDS-3UTR GCA 90 bp | GTTCTGGAGACTAGAGGTCCGAGCTCAAGGTACTGTCAGGGTTGGTTTCTGGTGTGGAATGTCGACGCCTaGAAAGTATATCTGTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VLETRGPSSRYCQGWFLVWNVDA*KVYLFL Trigger: CAAAAACAGATATACTTTGCAGGCGTCGACATTCCA...CACCAGAAACCAACCCTGACAGTACCTTGAGCTCGGACCTCTAGTCTCCAGAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000671421.1 |
||
| CDS-3UTR GCA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGAAGCTCGAGCTTATCTaGGTGTTTCGTTTTAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: CCQDDSCESGSPCIDLVRKLELI*VFRFKN Trigger: ATTTTTAAAACGAAACACGCAGATAAGCTCGAGCTT...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000662716.1 |
||
| CDS-3UTR GCA 90 bp | GTTCTGGAGACTAGAGGTCCGAGCTCAAGGTACTGTCAGGGTTGGTTTCTGGTGTCTCCAAGTCACCAATaGAAGCGAATAGATTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: VLETRGPSSRYCQGWFLVSPSHQ*KRIDFI Trigger: TATGAAATCTATTCGCTTGCATTGGTGACTTGGAGA...CACCAGAAACCAACCCTGACAGTACCTTGAGCTCGGACCTCTAGTCTCCAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671421.1 |
||
| CDS GCA 90 bp | GCCCCGTCCCGCCAAGGTCTAGCTGCGTCCCTCAGCTACCGGGGCTaGCCCGCCTGGAGCTGCGTGCGACACGGCGCCCGCCTCCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: APSRQGLAASLSYRG*PAWSCVRHGARLLL Trigger: GAGGAGGAGGCGGGCGCCGTGTCGCACGCAGCTCCAGGCGGGGCAGCCCCGGTAGCTGAGGGACGCAGCTAGACCTTGGCGGGACGGGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000655324.1 ENST00000663835.1 |
||
| CDS-3UTR CAA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGGCGGGGGAGAAGCTGTaGGGGGAGGGCCGGAACGCA | + |
|
Preference number: 5 (lower is better) Translates to: CCQDDSCESGSPCIDLVRAGEKL*GEGRNA Trigger: TGCGTTCCGGCCCTCCCCCAACAGCTTCTCCCCCGC...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000602748.5 |
||
| CDS GCA 90 bp | GAACCTGACTCCACACCTTTGTCGACCGGGACAGGGACTGGGGGTTaGACCCCAGATCAGAAAGTCAGAGGTGGCCCTCCGAATCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: EPDSTPLSTGTGTGG*TPDQKVRGGPPNRR Trigger: GCGCCGATTCGGAGGGCCACCTCTGACTTTCTGATCTGGGGTGCAACCCCCAGTCCCTGTCCCGGTCGACAAAGGTGTGGAGTCAGGTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409469.5 |
||
| CDS CCA 90 bp | CGGGACAGGGACTGGGGGTTGCACCCCAGATCAGAAAGTCAGAGGTaGCCCTCCGAATCGGCGCGGACTTCCGAGGAACCTCAGCCAATT | + |
|
Preference number: 5 (lower is better) Translates to: RDRDWGLHPRSESQR*PSESARTSEEPQPI Trigger: AATTGGCTGAGGTTCCTCGGAAGTCCGCGCCGATTCGGAGGGCCACCTCTGACTTTCTGATCTGGGGTGCAACCCCCAGTCCCTGTCCCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000409469.5 ENST00000662716.1 |
||
| CDS GCA 90 bp | CTCATTGCAGGCAAACCTTTGTCGACCGGGACAGGGACTGGGGGTTaGACCCCAGATCAGAAAGTCAGAGGTGGCCCTCCGAATCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: LIAGKPLSTGTGTGG*TPDQKVRGGPPNRR Trigger: GCGCCGATTCGGAGGGCCACCTCTGACTTTCTGATCTGGGGTGCAACCCCCAGTCCCTGTCCCGGTCGACAAAGGTTTGCCTGCAATGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000662716.1 |
||
| CDS-3UTR CAA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGGACAGGGACTGGGGGTaGCACCCCAGATCAGAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: CCQDDSCESGSPCIDLVRDRDWG*HPRSES Trigger: ACTTTCTGATCTGGGGTGCAACCCCCAGTCCCTGTC...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000662716.1 |
||
| CDS GCA 90 bp | CGGACTTCCGAGGAACCTCAGCCAATTCTCGACCCCCTTACCACCTaGAAGGCCTTAGGAATCGGCTCCAGAAAGCTCGAGCTTATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RTSEEPQPILDPLTT*KALGIGSRKLELIC Trigger: GCAGATAAGCTCGAGCTTTCTGGAGCCGATTCCTAAGGCCTTGCAGGTGGTAAGGGGGTCGAGAATTGGCTGAGGTTCCTCGGAAGTCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000409469.5 ENST00000662716.1 |
||
| CDS-3UTR CAA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGCTTCGGCATCGTCACTaGCACTGTTCTGGTGGACGA | + |
|
Preference number: 5 (lower is better) Translates to: CCQDDSCESGSPCIDLVRLRHRH*HCSGGR Trigger: TCGTCCACCAGAACAGTGCAAGTGACGATGCCGAAG...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000325222.9 ENST00000602748.5 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662132.1 ENST00000662670.1 ENST00000662716.1 ENST00000663044.1 ENST00000665936.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
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| CDS-3UTR CAA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGATTGCAGGCAAACCTTaGTCGACCGGGACAGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: CCQDDSCESGSPCIDLVRIAGKP*STGTGT Trigger: AGTCCCTGTCCCGGTCGACAAAGGTTTGCCTGCAAT...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662716.1 |
||
| CDS-3UTR CAA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGTCCATATATCTGGACTaGGCCATGCTCTGCCGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: CCQDDSCESGSPCIDLVRSIYLD*AMLCRV Trigger: CACACGGCAGAGCATGGCCAAGTCCAGATATATGGA...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000325222.9 ENST00000602748.5 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662132.1 ENST00000662670.1 ENST00000662716.1 ENST00000663044.1 ENST00000663835.1 ENST00000665936.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
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| CDS-3UTR CAA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGGAGAATGAAATCTCATaGCAGGCAAACCGGCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: CCQDDSCESGSPCIDLVRENEIS*QANRLR Trigger: CCGGAGCCGGTTTGCCTGCAATGAGATTTCATTCTC...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602748.5 |
||
| CDS-3UTR CAA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGAAGGTACTGTCAGGGTaGGTTTCTGGTGAGGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CCQDDSCESGSPCIDLVRKVLSG*VSGEGS Trigger: AGAGCCCTCACCAGAAACCAACCCTGACAGTACCTT...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671421.1 |
||
| CDS-3UTR CAA 90 bp | GTTCTGGAGACTAGAGGTCCGAGCTCAAGGTACTGTCAGGGTTGGTTTCTGGTGCTTCGGCATCGTCACTaGCACTGTTCTGGTGGACGA | + |
|
Preference number: 5 (lower is better) Translates to: VLETRGPSSRYCQGWFLVLRHRH*HCSGGR Trigger: TCGTCCACCAGAACAGTGCAAGTGACGATGCCGAAG...CACCAGAAACCAACCCTGACAGTACCTTGAGCTCGGACCTCTAGTCTCCAGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671421.1 |
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| CDS-3UTR CAA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGGAGAATGAAATCTCATaGCAGGCAAACCGCCATCGG | + |
|
Preference number: 5 (lower is better) Translates to: CCQDDSCESGSPCIDLVRENEIS*QANRHR Trigger: CCGATGGCGGTTTGCCTGCAATGAGATTTCATTCTC...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663044.1 |
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| CDS-3UTR CAA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGGAGAATGAAATCTCATaGCAGGCAAACCCGCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: CCQDDSCESGSPCIDLVRENEIS*QANPHL Trigger: GAGATGCGGGTTTGCCTGCAATGAGATTTCATTCTC...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000325222.9 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662132.1 ENST00000662670.1 ENST00000663835.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
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| CDS-3UTR CAA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGGATGATTGGGCCATCTaGGTAACCGCGTTGTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: CCQDDSCESGSPCIDLVRDDWAI*VTALLF Trigger: AAACAACAACGCGGTTACCAAGATGGCCCAATCATC...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000325222.9 ENST00000602748.5 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662132.1 ENST00000662670.1 ENST00000662716.1 ENST00000663044.1 ENST00000663835.1 ENST00000665936.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
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| CDS-3UTR CAA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGGCCTCCTCTGGGTTCTaGGAACTTTTCTTCAACAAG | + |
|
Preference number: 5 (lower is better) Translates to: CCQDDSCESGSPCIDLVRASSGF*ELFFNK Trigger: CTTGTTGAAGAAAAGTTCCAAGAACCCAGAGGAGGC...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 14 transcripts: ENST00000325222.9 ENST00000602748.5 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662132.1 ENST00000662670.1 ENST00000662716.1 ENST00000663044.1 ENST00000663835.1 ENST00000665936.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
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| CDS-3UTR CAA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGGCTCACGCCAATGTCTaGAAACATGCGCTGAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: CCQDDSCESGSPCIDLVRAHANV*KHALKF Trigger: AAACTTCAGCGCATGTTTCAAGACATTGGCGTGAGC...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000325222.9 ENST00000602748.5 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662132.1 ENST00000662670.1 ENST00000662716.1 ENST00000663044.1 ENST00000663835.1 ENST00000665936.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
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| CDS-3UTR CAA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGATGTCAATGCATTTCTaGATCACAGGGACTCGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: CCQDDSCESGSPCIDLVRMSMHF*ITGTRG Trigger: ACCTCGAGTCCCTGTGATCAAGAAATGCATTGACAT...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000325222.9 ENST00000602748.5 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662132.1 ENST00000662670.1 ENST00000662716.1 ENST00000663044.1 ENST00000663835.1 ENST00000665936.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
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| CDS-3UTR CAA 90 bp | GTTCTGGAGACTAGAGGTCCGAGCTCAAGGTACTGTCAGGGTTGGTTTCTGGTGCTCCTCGTGCTTGGTTaGACTGGTGAACAAGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VLETRGPSSRYCQGWFLVLLVLG*TGEQVL Trigger: CAGAACTTGTTCACCAGTCAAACCAAGCACGAGGAG...CACCAGAAACCAACCCTGACAGTACCTTGAGCTCGGACCTCTAGTCTCCAGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671421.1 |
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| CDS-3UTR CAA 90 bp | GTTCTGGAGACTAGAGGTCCGAGCTCAAGGTACTGTCAGGGTTGGTTTCTGGTGGATGATTGGGCCATCTaGGTAACCGCGTTGTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: VLETRGPSSRYCQGWFLVDDWAI*VTALLF Trigger: AAACAACAACGCGGTTACCAAGATGGCCCAATCATC...CACCAGAAACCAACCCTGACAGTACCTTGAGCTCGGACCTCTAGTCTCCAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671421.1 |
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| CDS-3UTR CAA 90 bp | GTTCTGGAGACTAGAGGTCCGAGCTCAAGGTACTGTCAGGGTTGGTTTCTGGTGGCTCACGCCAATGTCTaGAAACATGCGCTGAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: VLETRGPSSRYCQGWFLVAHANV*KHALKF Trigger: AAACTTCAGCGCATGTTTCAAGACATTGGCGTGAGC...CACCAGAAACCAACCCTGACAGTACCTTGAGCTCGGACCTCTAGTCTCCAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671421.1 |
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| CDS-3UTR CAA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGGAGAATGAAATCTCATaGCAGGCAAACCTTTGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: CCQDDSCESGSPCIDLVRENEIS*QANLCR Trigger: TCGACAAAGGTTTGCCTGCAATGAGATTTCATTCTC...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000662716.1 |
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| CDS-3UTR CAA 90 bp | TGCTGCCAAGACGACAGCTGCGAATCGGGGAGCCCATGTATTGACTTAGTGCGGTTTGTCAAGTGCTTTTaGAATTGCTCGTTCAGATCT | + |
|
Preference number: 5 (lower is better) Translates to: CCQDDSCESGSPCIDLVRFVKCF*NCSFRS Trigger: AGATCTGAACGAGCAATTCAAAAAGCACTTGACAAA...CCGCACTAAGTCAATACATGGGCTCCCCGATTCGCAGCTGTCGTCTTGGCAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 14 transcripts: ENST00000325222.9 ENST00000602748.5 ENST00000655324.1 ENST00000656001.1 ENST00000660240.1 ENST00000662132.1 ENST00000662670.1 ENST00000662716.1 ENST00000663044.1 ENST00000663835.1 ENST00000665936.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
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| CDS GCA 72 bp | CGCCAAGGTCTAGCTGCGTCCCTCAGCTACCGGGGCTaGCCCGCCTGGAGCTGCGTGCGACACGGCGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: RQGLAASLSYRG*PAWSCVRHGAR Trigger: GCGGGCGCCGTGTCGCACGCAGCTCCAGGCGGGGCAGCCCCGGTAGCTGAGGGACGCAGCTAGACCTTGGCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655324.1 ENST00000663835.1 |
||
| CDS CCA 72 bp | AAGGCTCCCGCGACGCCTCCGCCTGGTCCCTGGGCCTaGGCCCCGGCGAAAGCCCCGTCCCGCCAAGGTCTA | + |
|
Preference number: 6 (lower is better) Translates to: KAPATPPPGPWA*APAKAPSRQGL Trigger: TAGACCTTGGCGGGACGGGGCTTTCGCCGGGGCCCAGGCCCAGGGACCAGGCGGAGGCGTCGCGGGAGCCTT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000325222.9 ENST00000655324.1 ENST00000656001.1 ENST00000662132.1 ENST00000662670.1 ENST00000663835.1 ENST00000666124.1 ENST00000671397.1 ENST00000671421.1 |
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| CDS CCA 72 bp | CTAGCTGCGTCCCTCAGCTACCGGGGCTGCCCCGCCTaGAGCTGCGTGCGACACGGCGCCCGCCTCCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LAASLSYRGCPA*SCVRHGARLLL Trigger: GAGGAGGAGGCGGGCGCCGTGTCGCACGCAGCTCCAGGCGGGGCAGCCCCGGTAGCTGAGGGACGCAGCTAG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000655324.1 ENST00000663835.1 |
||
| CDS GCA 72 bp | TCCACACCTTTGTCGACCGGGACAGGGACTGGGGGTTaGACCCCAGATCAGAAAGTCAGAGGTGGCCCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: STPLSTGTGTGG*TPDQKVRGGPP Trigger: CGGAGGGCCACCTCTGACTTTCTGATCTGGGGTGCAACCCCCAGTCCCTGTCCCGGTCGACAAAGGTGTGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409469.5 |
||
| CDS GCA 72 bp | GGCAAACCTTTGTCGACCGGGACAGGGACTGGGGGTTaGACCCCAGATCAGAAAGTCAGAGGTGGCCCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: GKPLSTGTGTGG*TPDQKVRGGPP Trigger: CGGAGGGCCACCTCTGACTTTCTGATCTGGGGTGCAACCCCCAGTCCCTGTCCCGGTCGACAAAGGTTTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000662716.1 |
||
| CDS CAA 72 bp | CTCCACACCTTTGTCGACCGGGACAGGGACTGGGGGTaGCACCCCAGATCAGAAAGTCAGAGGTGGCCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LHTFVDRDRDWG*HPRSESQRWPS Trigger: GGAGGGCCACCTCTGACTTTCTGATCTGGGGTGCAACCCCCAGTCCCTGTCCCGGTCGACAAAGGTGTGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409469.5 |
||
| CDS CAA 72 bp | AGGCAAACCTTTGTCGACCGGGACAGGGACTGGGGGTaGCACCCCAGATCAGAAAGTCAGAGGTGGCCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RQTFVDRDRDWG*HPRSESQRWPS Trigger: GGAGGGCCACCTCTGACTTTCTGATCTGGGGTGCAACCCCCAGTCCCTGTCCCGGTCGACAAAGGTTTGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000662716.1 |
||
| CDS CAA 90 bp | TCTCATTGCAGGCAAACCTTTGTCGACCGGGACAGGGACTGGGGGTaGCACCCCAGATCAGAAAGTCAGAGGTGGCCCTCCGAATCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: SHCRQTFVDRDRDWG*HPRSESQRWPSESA Trigger: CGCCGATTCGGAGGGCCACCTCTGACTTTCTGATCTGGGGTGCAACCCCCAGTCCCTGTCCCGGTCGACAAAGGTTTGCCTGCAATGAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000662716.1 |
||
| CDS CAA 72 bp | TCATTGCAGGCAAACCTGGAACCTGACTCCACACCTTaGTCGACCGGGACAGGGACTGGGGGTTGCACCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SLQANLEPDSTP*STGTGTGGCTP Trigger: TGGGGTGCAACCCCCAGTCCCTGTCCCGGTCGACAAAGGTGTGGAGTCAGGTTCCAGGTTTGCCTGCAATGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409469.5 |
||
| CDS CCA 72 bp | CATTGCAGGCAAACCTTTGTCGACCGGGACAGGGACTaGGGGTTGCACCCCAGATCAGAAAGTCAGAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: HCRQTFVDRDRD*GLHPRSESQRW Trigger: CCACCTCTGACTTTCTGATCTGGGGTGCAACCCCCAGTCCCTGTCCCGGTCGACAAAGGTTTGCCTGCAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662716.1 |
||
| CDS GCA 72 bp | GAGGAACCTCAGCCAATTCTCGACCCCCTTACCACCTaGAAGGCCTTAGGAATCGGCTCCAGAAAGCTCGAG | + |
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Preference number: 6 (lower is better) Translates to: EEPQPILDPLTT*KALGIGSRKLE Trigger: CTCGAGCTTTCTGGAGCCGATTCCTAAGGCCTTGCAGGTGGTAAGGGGGTCGAGAATTGGCTGAGGTTCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000409469.5 ENST00000662716.1 |
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| CDS CAA 72 bp | CTAGGCTTTCCCCTTCAGACTTTCAGTAACTCCTGTTaGGCAAATTTTGACATTCACTCTATCCTTCGTCTT | + |
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Preference number: 6 (lower is better) Translates to: LGFPLQTFSNSC*ANFDIHSILRL Trigger: AAGACGAAGGATAGAGTGAATGTCAAAATTTGCCAAACAGGAGTTACTGAAAGTCTGAAGGGGAAAGCCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409469.5 |
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