Pregenerated sensors for CTXND2 (Homo sapiens)
Ensembl gene IDs: ENSG00000283324Ensembl transcript IDs: ENST00000636087.1
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTGAAGGCCGGAAGTCCAAAATCAAGGTGTTAGTAAGACCATACTaGGGTACCAGAATCTCTAGGGGAGTCATTGGATTTAAGTCTCAC | + |
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Preference number: 1 (lower is better) Translates to: CEGRKSKIKVLVRPY*GTRISRGVIGFKSH Trigger: GTGAGACTTAAATCCAATGACTCCCCTAGAGATTCTGGTACCCCAGTATGGTCTTACTAACACCTTGATTTTGGACTTCCGGCCTTCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| 3UTR CCA 90 bp | TATCTCACTTTAGTAGCCATTTCCCTGAACAGGAACAATACAAACTaGCTTGTGTTTCATCTCACTGTGGAATGCAAGAGTGAGAAGGCT | + |
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Preference number: 1 (lower is better) Translates to: YLTLVAISLNRNNTN*LVFHLTVECKSEKA Trigger: AGCCTTCTCACTCTTGCATTCCACAGTGAGATGAAACACAAGCCAGTTTGTATTGTTCCTGTTCAGGGAAATGGCTACTAAAGTGAGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| 3UTR-3UTR GCA 90 bp | TTTGGGATGAGAGAGATTAAGGAATTCACCCACAGCAAATTAGTCCCCTTCTACAGATTTCAAATCTCTTaGTTGGGGGAGTCTACCAGG | + |
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Preference number: 2 (lower is better) Translates to: FGMREIKEFTHSKLVPFYRFQIS*LGESTR Trigger: CCTGGTAGACTCCCCCAAGCAAGAGATTTGAAATCT...GTAGAAGGGGACTAATTTGCTGTGGGTGAATTCCTTAATCTCTCTCATCCCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| 3UTR-3UTR GCA 90 bp | CAATCTGGTTACACTCTTCTTATAGGACATTTGGTTTCTGCTGAGCCTACATTTCATCTCACTGTGGAATaGAAGAGTGAGAAGGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: QSGYTLLIGHLVSAEPTFHLTVE*KSEKAE Trigger: CTCAGCCTTCTCACTCTTGCATTCCACAGTGAGATG...AAATGTAGGCTCAGCAGAAACCAAATGTCCTATAAGAAGAGTGTAACCAGATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| 3UTR-3UTR CCA 90 bp | CAATCTGGTTACACTCTTCTTATAGGACATTTGGTTTCTGCTGAGCCTACATTTGCTTCTAGTTTCAGGTaGACCTTACCAAGCATGATG | + |
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Preference number: 2 (lower is better) Translates to: QSGYTLLIGHLVSAEPTFASSFR*TLPSMM Trigger: CATCATGCTTGGTAAGGTCCACCTGAAACTAGAAGC...AAATGTAGGCTCAGCAGAAACCAAATGTCCTATAAGAAGAGTGTAACCAGATTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| 3UTR-3UTR CCA 90 bp | CAATCTGGTTACACTCTTCTTATAGGACATTTGGTTTCTGCTGAGCCTACATTTTTCAAATCTCTTGCTTaGGGGAGTCTACCAGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: QSGYTLLIGHLVSAEPTFFKSLA*GSLPGF Trigger: AAAACCTGGTAGACTCCCCCAAGCAAGAGATTTGAA...AAATGTAGGCTCAGCAGAAACCAAATGTCCTATAAGAAGAGTGTAACCAGATTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| 3UTR-3UTR CCA 90 bp | TCTACCAGAGAGTTCTGCCCACTTAAGAACAGCAGATTTTATAAAACTTCACACTGTTTCATCTCACTGTaGAATGCAAGAGTGAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: STREFCPLKNSRFYKTSHCFISL*NARVRR Trigger: CCTTCTCACTCTTGCATTCCACAGTGAGATGAAACA...GTGTGAAGTTTTATAAAATCTGCTGTTCTTAAGTGGGCAGAACTCTCTGGTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| 3UTR-3UTR CCA 90 bp | CAATCTGGTTACACTCTTCTTATAGGACATTTGGTTTCTGCTGAGCCTACATTTAGGAACAATACAAACTaGCTTGTGTTTCATCTCACT | + |
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Preference number: 2 (lower is better) Translates to: QSGYTLLIGHLVSAEPTFRNNTN*LVFHLT Trigger: AGTGAGATGAAACACAAGCCAGTTTGTATTGTTCCT...AAATGTAGGCTCAGCAGAAACCAAATGTCCTATAAGAAGAGTGTAACCAGATTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| 3UTR-3UTR CCA 90 bp | AGTCCCCTTCTACCAGAGAGTTCTGCCCACTTAAGAACAGCAGATTTTATAAAACACACTAAAACAATCTaGTTACACTCTTCTTATAGG | + |
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Preference number: 2 (lower is better) Translates to: SPLLPESSAHLRTADFIKHTKTI*LHSSYR Trigger: CCTATAAGAAGAGTGTAACCAGATTGTTTTAGTGTG...TTTTATAAAATCTGCTGTTCTTAAGTGGGCAGAACTCTCTGGTAGAAGGGGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| 3UTR-3UTR CAA 90 bp | AAGGAATTCACCCACAGCAAATTAGTCCCCTTCTACCAGAGAGTTCTGCCCACTCTTCTTATAGGACATTaGGTTTCTGCTGAGCCTACA | + |
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Preference number: 3 (lower is better) Translates to: KEFTHSKLVPFYQRVLPTLLIGH*VSAEPT Trigger: TGTAGGCTCAGCAGAAACCAAATGTCCTATAAGAAG...AGTGGGCAGAACTCTCTGGTAGAAGGGGACTAATTTGCTGTGGGTGAATTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| 3UTR CCA 72 bp | CGGAAGTCCAAAATCAAGGTGTTAGTAAGACCATACTaGGGTACCAGAATCTCTAGGGGAGTCATTGGATTT | + |
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Preference number: 3 (lower is better) Translates to: RKSKIKVLVRPY*GTRISRGVIGF Trigger: AAATCCAATGACTCCCCTAGAGATTCTGGTACCCCAGTATGGTCTTACTAACACCTTGATTTTGGACTTCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| 3UTR-3UTR CAA 90 bp | CTAAAACAATCTGGTTACACTCTTCTTATAGGACATTTGGTTTCTGCTGAGCCTCAGATTTCAAATCTCTaGCTTGGGGGAGTCTACCAG | + |
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Preference number: 3 (lower is better) Translates to: LKQSGYTLLIGHLVSAEPQISNL*LGGVYQ Trigger: CTGGTAGACTCCCCCAAGCAAGAGATTTGAAATCTG...AGGCTCAGCAGAAACCAAATGTCCTATAAGAAGAGTGTAACCAGATTGTTTTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| 3UTR CCA 72 bp | TTAGTAGCCATTTCCCTGAACAGGAACAATACAAACTaGCTTGTGTTTCATCTCACTGTGGAATGCAAGAGT | + |
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Preference number: 3 (lower is better) Translates to: LVAISLNRNNTN*LVFHLTVECKS Trigger: ACTCTTGCATTCCACAGTGAGATGAAACACAAGCCAGTTTGTATTGTTCCTGTTCAGGGAAATGGCTACTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| 3UTR-3UTR CAA 90 bp | TCTACCAGAGAGTTCTGCCCACTTAAGAACAGCAGATTTTATAAAACTTCACACTTTCAAATCTCTTGCTaGGGGGAGTCTACCAGGTTT | + |
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Preference number: 3 (lower is better) Translates to: STREFCPLKNSRFYKTSHFQISC*GESTRF Trigger: AAACCTGGTAGACTCCCCCAAGCAAGAGATTTGAAA...GTGTGAAGTTTTATAAAATCTGCTGTTCTTAAGTGGGCAGAACTCTCTGGTAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS-3UTR TCA 90 bp | AAGGAATTCACCCACAGCAAATTAGTCCCCTTCTACCAGAGAGTTCTGCCCACTTCCCCACTCCCACGCTaGACTCAGAAGCTTCATGAA | + |
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Preference number: 4 (lower is better) Translates to: KEFTHSKLVPFYQRVLPTSPLPR*TQKLHE Trigger: TTCATGAAGCTTCTGAGTTCAGCGTGGGAGTGGGGA...AGTGGGCAGAACTCTCTGGTAGAAGGGGACTAATTTGCTGTGGGTGAATTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS-3UTR TCA 90 bp | AAGGAATTCACCCACAGCAAATTAGTCCCCTTCTACCAGAGAGTTCTGCCCACTACCACTGGACAGGCTTaGATCTTCCATGGGGACTTG | + |
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Preference number: 4 (lower is better) Translates to: KEFTHSKLVPFYQRVLPTTTGQA*IFHGDL Trigger: CAAGTCCCCATGGAAGATTCAAGCCTGTCCAGTGGT...AGTGGGCAGAACTCTCTGGTAGAAGGGGACTAATTTGCTGTGGGTGAATTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS-3UTR TCA 90 bp | ATTAAGGAATTCACCCACAGCAAATTAGTCCCCTTCTACCAGAGAGTTCTGCCCTCTGCCACCTCTAGGTaGGCTTCTAGTTTCAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: IKEFTHSKLVPFYQRVLPSATSR*ASSFRW Trigger: CCACCTGAAACTAGAAGCTCACCTAGAGGTGGCAGA...GGGCAGAACTCTCTGGTAGAAGGGGACTAATTTGCTGTGGGTGAATTCCTTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS-3UTR CCA 90 bp | AAGGAATTCACCCACAGCAAATTAGTCCCCTTCTACCAGAGAGTTCTGCCCACTCTGTGGTTGTGGAGCTaGCCTTGTAGGGATTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: KEFTHSKLVPFYQRVLPTLWLWS*PCRDSS Trigger: TGAAGAATCCCTACAAGGCCAGCTCCACAACCACAG...AGTGGGCAGAACTCTCTGGTAGAAGGGGACTAATTTGCTGTGGGTGAATTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS-3UTR CCA 90 bp | AAGGAATTCACCCACAGCAAATTAGTCCCCTTCTACCAGAGAGTTCTGCCCACTATGGTTCTGTGGTTGTaGAGCTGGCCTTGTAGGGAT | + |
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Preference number: 4 (lower is better) Translates to: KEFTHSKLVPFYQRVLPTMVLWL*SWPCRD Trigger: ATCCCTACAAGGCCAGCTCCACAACCACAGAACCAT...AGTGGGCAGAACTCTCTGGTAGAAGGGGACTAATTTGCTGTGGGTGAATTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS-3UTR TCA 90 bp | AAGGAATTCACCCACAGCAAATTAGTCCCCTTCTACCAGAGAGTTCTGCCCACTTTGTCATATTCCTTCTaGGAGCGGATATCCAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: KEFTHSKLVPFYQRVLPTLSYSF*ERISKA Trigger: AGCCTTGGATATCCGCTCTCAGAAGGAATATGACAA...AGTGGGCAGAACTCTCTGGTAGAAGGGGACTAATTTGCTGTGGGTGAATTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS-3UTR CCA 90 bp | AGTTGTGAAGGCCGGAAGTCCAAAATCAAGGTGTTAGTAAGACCATACTGGGGTCCACATCAACACCACTaGACAGGCTTGAATCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: SCEGRKSKIKVLVRPYWGPHQHH*TGLNLP Trigger: TGGAAGATTCAAGCCTGTCCAGTGGTGTTGATGTGG...ACCCCAGTATGGTCTTACTAACACCTTGATTTTGGACTTCCGGCCTTCACAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS-3UTR TCA 90 bp | ATTAAGGAATTCACCCACAGCAAATTAGTCCCCTTCTACCAGAGAGTTCTGCCCATTTCCTCACAGTTGTaGAGGCCGGAAGTCCAAAAT | + |
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Preference number: 4 (lower is better) Translates to: IKEFTHSKLVPFYQRVLPISSQL*RPEVQN Trigger: ATTTTGGACTTCCGGCCTTCACAACTGTGAGGAAAT...GGGCAGAACTCTCTGGTAGAAGGGGACTAATTTGCTGTGGGTGAATTCCTTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS-3UTR GCA 90 bp | AGTTGTGAAGGCCGGAAGTCCAAAATCAAGGTGTTAGTAAGACCATACTGGGGTAGATTTCAAATCTCTTaGTTGGGGGAGTCTACCAGG | + |
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Preference number: 4 (lower is better) Translates to: SCEGRKSKIKVLVRPYWGRFQIS*LGESTR Trigger: CCTGGTAGACTCCCCCAAGCAAGAGATTTGAAATCT...ACCCCAGTATGGTCTTACTAACACCTTGATTTTGGACTTCCGGCCTTCACAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS-3UTR CCA 90 bp | TTTGGGATGAGAGAGATTAAGGAATTCACCCACAGCAAATTAGTCCCCTTCTACCCCACAAAAGGAGAGTaGTTGGTAGCTCTCTCCCTT | + |
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Preference number: 4 (lower is better) Translates to: FGMREIKEFTHSKLVPFYPTKGE*LVALSL Trigger: AAGGGAGAGAGCTACCAACCACTCTCCTTTTGTGGG...GTAGAAGGGGACTAATTTGCTGTGGGTGAATTCCTTAATCTCTCTCATCCCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS-3UTR CCA 90 bp | TTTGGGATGAGAGAGATTAAGGAATTCACCCACAGCAAATTAGTCCCCTTCTACTCAGAGATGGTTCTGTaGTTGTGGAGCTGGCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: FGMREIKEFTHSKLVPFYSEMVL*LWSWPC Trigger: ACAAGGCCAGCTCCACAACCACAGAACCATCTCTGA...GTAGAAGGGGACTAATTTGCTGTGGGTGAATTCCTTAATCTCTCTCATCCCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS-3UTR CCA 90 bp | AAGGAATTCACCCACAGCAAATTAGTCCCCTTCTACCAGAGAGTTCTGCCCACTTGTTTCATCTCACTGTaGAATGCAAGAGTGAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: KEFTHSKLVPFYQRVLPTCFISL*NARVRR Trigger: CCTTCTCACTCTTGCATTCCACAGTGAGATGAAACA...AGTGGGCAGAACTCTCTGGTAGAAGGGGACTAATTTGCTGTGGGTGAATTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS-3UTR GCA 90 bp | AGTCCCCTTCTACCAGAGAGTTCTGCCCACTTAAGAACAGCAGATTTTATAAAATCTTCCATGGGGACTTaGACCTCGTTACTGTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: SPLLPESSAHLRTADFIKSSMGT*TSLLLS Trigger: GGACAACAGTAACGAGGTGCAAGTCCCCATGGAAGA...TTTTATAAAATCTGCTGTTCTTAAGTGGGCAGAACTCTCTGGTAGAAGGGGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS-3UTR CCA 90 bp | ATTAAGGAATTCACCCACAGCAAATTAGTCCCCTTCTACCAGAGAGTTCTGCCCTTCAAATCTCTTGCTTaGGGGAGTCTACCAGGTTTT | + |
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Preference number: 4 (lower is better) Translates to: IKEFTHSKLVPFYQRVLPFKSLA*GSLPGF Trigger: AAAACCTGGTAGACTCCCCCAAGCAAGAGATTTGAA...GGGCAGAACTCTCTGGTAGAAGGGGACTAATTTGCTGTGGGTGAATTCCTTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS-3UTR GCA 90 bp | CAATCTGGTTACACTCTTCTTATAGGACATTTGGTTTCTGCTGAGCCTACATTTGCTACATTCACTTGTTaGCAGGGCAGTCTCCTCCTA | + |
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Preference number: 4 (lower is better) Translates to: QSGYTLLIGHLVSAEPTFATFTC*QGSLLL Trigger: TAGGAGGAGACTGCCCTGGCAACAAGTGAATGTAGC...AAATGTAGGCTCAGCAGAAACCAAATGTCCTATAAGAAGAGTGTAACCAGATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS-3UTR CCA 90 bp | CTAAAACAATCTGGTTACACTCTTCTTATAGGACATTTGGTTTCTGCTGAGCCTGGCTTGAATCTTCCATaGGGACTTGCACCTCGTTAC | + |
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Preference number: 4 (lower is better) Translates to: LKQSGYTLLIGHLVSAEPGLNLP*GLAPRY Trigger: GTAACGAGGTGCAAGTCCCCATGGAAGATTCAAGCC...AGGCTCAGCAGAAACCAAATGTCCTATAAGAAGAGTGTAACCAGATTGTTTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS-3UTR GCA 90 bp | TCTACCAGAGAGTTCTGCCCACTTAAGAACAGCAGATTTTATAAAACTTCACACCATCTCACTGTGGAATaGAAGAGTGAGAAGGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: STREFCPLKNSRFYKTSHHLTVE*KSEKAE Trigger: CTCAGCCTTCTCACTCTTGCATTCCACAGTGAGATG...GTGTGAAGTTTTATAAAATCTGCTGTTCTTAAGTGGGCAGAACTCTCTGGTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS-3UTR CCA 90 bp | TTTGGGATGAGAGAGATTAAGGAATTCACCCACAGCAAATTAGTCCCCTTCTACGAACAACAAAGGCAATaGCAAAGCCTTTGTCCACAT | + |
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Preference number: 4 (lower is better) Translates to: FGMREIKEFTHSKLVPFYEQQRQ*QSLCPH Trigger: ATGTGGACAAAGGCTTTGCCATTGCCTTTGTTGTTC...GTAGAAGGGGACTAATTTGCTGTGGGTGAATTCCTTAATCTCTCTCATCCCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS-3UTR CCA 90 bp | AGTTGTGAAGGCCGGAAGTCCAAAATCAAGGTGTTAGTAAGACCATACTGGGGTAGGAACAATACAAACTaGCTTGTGTTTCATCTCACT | + |
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Preference number: 4 (lower is better) Translates to: SCEGRKSKIKVLVRPYWGRNNTN*LVFHLT Trigger: AGTGAGATGAAACACAAGCCAGTTTGTATTGTTCCT...ACCCCAGTATGGTCTTACTAACACCTTGATTTTGGACTTCCGGCCTTCACAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS-3UTR TCA 90 bp | AGTCCCCTTCTACCAGAGAGTTCTGCCCACTTAAGAACAGCAGATTTTATAAAATTCTGGGGCCCTCACTaGAACCTCTACATATTATTT | + |
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Preference number: 4 (lower is better) Translates to: SPLLPESSAHLRTADFIKFWGPH*NLYILF Trigger: AAATAATATGTAGAGGTTTCAGTGAGGGCCCCAGAA...TTTTATAAAATCTGCTGTTCTTAAGTGGGCAGAACTCTCTGGTAGAAGGGGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS-3UTR GCA 90 bp | CTAAAACAATCTGGTTACACTCTTCTTATAGGACATTTGGTTTCTGCTGAGCCTTCTACCAGAGAGTTCTaGCCACTTAAGAACAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: LKQSGYTLLIGHLVSAEPSTREF*PLKNSR Trigger: TCTGCTGTTCTTAAGTGGGCAGAACTCTCTGGTAGA...AGGCTCAGCAGAAACCAAATGTCCTATAAGAAGAGTGTAACCAGATTGTTTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS-3UTR CCA 90 bp | CTAAAACAATCTGGTTACACTCTTCTTATAGGACATTTGGTTTCTGCTGAGCCTGCTTCTAGTTTCAGGTaGACCTTACCAAGCATGATG | + |
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Preference number: 4 (lower is better) Translates to: LKQSGYTLLIGHLVSAEPASSFR*TLPSMM Trigger: CATCATGCTTGGTAAGGTCCACCTGAAACTAGAAGC...AGGCTCAGCAGAAACCAAATGTCCTATAAGAAGAGTGTAACCAGATTGTTTTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS-3UTR CCA 90 bp | CAATCTGGTTACACTCTTCTTATAGGACATTTGGTTTCTGCTGAGCCTACATTTGATTCTTCACCAGCTTaGCACACCGAAAAATCATCA | + |
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Preference number: 4 (lower is better) Translates to: QSGYTLLIGHLVSAEPTFDSSPA*HTEKSS Trigger: TGATGATTTTTCGGTGTGCCAAGCTGGTGAAGAATC...AAATGTAGGCTCAGCAGAAACCAAATGTCCTATAAGAAGAGTGTAACCAGATTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS-3UTR CCA 90 bp | GCTTCTAGTTTCAGGTGGACCTTACCAAGCATGATGACATTATGTTACATTACACACACTAAAACAATCTaGTTACACTCTTCTTATAGG | + |
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Preference number: 4 (lower is better) Translates to: ASSFRWTLPSMMTLCYITHTKTI*LHSSYR Trigger: CCTATAAGAAGAGTGTAACCAGATTGTTTTAGTGTG...TGTAATGTAACATAATGTCATCATGCTTGGTAAGGTCCACCTGAAACTAGAAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS TCA 90 bp | GGCAATGGCAAAGCCTTTGTCCACATCAACACCACTGGACAGGCTTaGATCTTCCATGGGGACTTGCACCTCGTTACTGTTGTCCAGCTC | + |
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Preference number: 5 (lower is better) Translates to: GNGKAFVHINTTGQA*IFHGDLHLVTVVQL Trigger: GAGCTGGACAACAGTAACGAGGTGCAAGTCCCCATGGAAGATTCAAGCCTGTCCAGTGGTGTTGATGTGGACAAAGGCTTTGCCATTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS CCA 90 bp | AGCCTTTGTCCACATCAACACCACTGGACAGGCTTGAATCTTCCATaGGGACTTGCACCTCGTTACTGTTGTCCAGCTCCAGCTAATTCC | + |
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Preference number: 5 (lower is better) Translates to: SLCPHQHHWTGLNLP*GLAPRYCCPAPANS Trigger: GGAATTAGCTGGAGCTGGACAACAGTAACGAGGTGCAAGTCCCCATGGAAGATTCAAGCCTGTCCAGTGGTGTTGATGTGGACAAAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS-3UTR CAA 90 bp | AAGGAATTCACCCACAGCAAATTAGTCCCCTTCTACCAGAGAGTTCTGCCCACTACAAAAGGAGAGTGGTaGGTAGCTCTCTCCCTTCCC | + |
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Preference number: 5 (lower is better) Translates to: KEFTHSKLVPFYQRVLPTTKGEW*VALSLP Trigger: GGGAAGGGAGAGAGCTACCAACCACTCTCCTTTTGT...AGTGGGCAGAACTCTCTGGTAGAAGGGGACTAATTTGCTGTGGGTGAATTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS CCA 90 bp | GAACAACAAAGGCAATGGCAAAGCCTTTGTCCACATCAACACCACTaGACAGGCTTGAATCTTCCATGGGGACTTGCACCTCGTTACTGT | + |
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Preference number: 5 (lower is better) Translates to: EQQRQWQSLCPHQHH*TGLNLPWGLAPRYC Trigger: ACAGTAACGAGGTGCAAGTCCCCATGGAAGATTCAAGCCTGTCCAGTGGTGTTGATGTGGACAAAGGCTTTGCCATTGCCTTTGTTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS CCA 90 bp | TGCTTGGGGGAGTCTACCAGGTTTTATTATACTTCAGCTCAGAGATaGTTCTGTGGTTGTGGAGCTGGCCTTGTAGGGATTCTTCACCAG | + |
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Preference number: 5 (lower is better) Translates to: CLGESTRFYYTSAQR*FCGCGAGLVGILHQ Trigger: CTGGTGAAGAATCCCTACAAGGCCAGCTCCACAACCACAGAACCATCTCTGAGCTGAAGTATAATAAAACCTGGTAGACTCCCCCAAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS-3UTR CAA 90 bp | AGTTGTGAAGGCCGGAAGTCCAAAATCAAGGTGTTAGTAAGACCATACTGGGGTCAAGGCTACATTCACTaGTTGCCAGGGCAGTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: SCEGRKSKIKVLVRPYWGQGYIH*LPGQSP Trigger: AGGAGACTGCCCTGGCAACAAGTGAATGTAGCCTTG...ACCCCAGTATGGTCTTACTAACACCTTGATTTTGGACTTCCGGCCTTCACAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS-3UTR CAA 90 bp | AAGGAATTCACCCACAGCAAATTAGTCCCCTTCTACCAGAGAGTTCTGCCCACTGCAATGGCAAAGCCTTaGTCCACATCAACACCACTG | + |
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Preference number: 5 (lower is better) Translates to: KEFTHSKLVPFYQRVLPTAMAKP*STSTPL Trigger: CAGTGGTGTTGATGTGGACAAAGGCTTTGCCATTGC...AGTGGGCAGAACTCTCTGGTAGAAGGGGACTAATTTGCTGTGGGTGAATTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS CCA 90 bp | TTCACTTGTTGCCAGGGCAGTCTCCTCCTACTCAAGTACATCTCTTaGCAGCCTCTGTTTTTATCAACCTCTTCCCACAAAAGGAGAGTG | + |
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Preference number: 5 (lower is better) Translates to: FTCCQGSLLLLKYIS*QPLFLSTSSHKRRV Trigger: CACTCTCCTTTTGTGGGAAGAGGTTGATAAAAACAGAGGCTGCCAAGAGATGTACTTGAGTAGGAGGAGACTGCCCTGGCAACAAGTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS-3UTR CAA 90 bp | TTTGGGATGAGAGAGATTAAGGAATTCACCCACAGCAAATTAGTCCCCTTCTACGGCTACATTCACTTGTaGCCAGGGCAGTCTCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: FGMREIKEFTHSKLVPFYGYIHL*PGQSPP Trigger: AGGAGGAGACTGCCCTGGCAACAAGTGAATGTAGCC...GTAGAAGGGGACTAATTTGCTGTGGGTGAATTCCTTAATCTCTCTCATCCCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS-3UTR CAA 90 bp | AGTTGTGAAGGCCGGAAGTCCAAAATCAAGGTGTTAGTAAGACCATACTGGGGTATCTTCCATGGGGACTaGCACCTCGTTACTGTTGTC | + |
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Preference number: 5 (lower is better) Translates to: SCEGRKSKIKVLVRPYWGIFHGD*HLVTVV Trigger: GACAACAGTAACGAGGTGCAAGTCCCCATGGAAGAT...ACCCCAGTATGGTCTTACTAACACCTTGATTTTGGACTTCCGGCCTTCACAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS-3UTR CAA 90 bp | AGTTGTGAAGGCCGGAAGTCCAAAATCAAGGTGTTAGTAAGACCATACTGGGGTGGATTCTTCACCAGCTaGGCACACCGAAAAATCATC | + |
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Preference number: 5 (lower is better) Translates to: SCEGRKSKIKVLVRPYWGGFFTS*AHRKII Trigger: GATGATTTTTCGGTGTGCCAAGCTGGTGAAGAATCC...ACCCCAGTATGGTCTTACTAACACCTTGATTTTGGACTTCCGGCCTTCACAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS CCA 90 bp | GTTCTGTGGTTGTGGAGCTGGCCTTGTAGGGATTCTTCACCAGCTTaGCACACCGAAAAATCATCACTATTAGGAACAGAAACAGAAGAA | + |
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Preference number: 5 (lower is better) Translates to: VLWLWSWPCRDSSPA*HTEKSSLLGTETEE Trigger: TTCTTCTGTTTCTGTTCCTAATAGTGATGATTTTTCGGTGTGCCAAGCTGGTGAAGAATCCCTACAAGGCCAGCTCCACAACCACAGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS CCA 90 bp | GTTTTATTATACTTCAGCTCAGAGATGGTTCTGTGGTTGTGGAGCTaGCCTTGTAGGGATTCTTCACCAGCTTGGCACACCGAAAAATCA | + |
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Preference number: 5 (lower is better) Translates to: VLLYFSSEMVLWLWS*PCRDSSPAWHTEKS Trigger: TGATTTTTCGGTGTGCCAAGCTGGTGAAGAATCCCTACAAGGCCAGCTCCACAACCACAGAACCATCTCTGAGCTGAAGTATAATAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS-3UTR CAA 90 bp | CTAAAACAATCTGGTTACACTCTTCTTATAGGACATTTGGTTTCTGCTGAGCCTGAGATGGTTCTGTGGTaGTGGAGCTGGCCTTGTAGG | + |
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Preference number: 5 (lower is better) Translates to: LKQSGYTLLIGHLVSAEPEMVLW*WSWPCR Trigger: CCTACAAGGCCAGCTCCACAACCACAGAACCATCTC...AGGCTCAGCAGAAACCAAATGTCCTATAAGAAGAGTGTAACCAGATTGTTTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS-3UTR CAA 90 bp | TCTACCAGAGAGTTCTGCCCACTTAAGAACAGCAGATTTTATAAAACTTCACACCACCACTGGACAGGCTaGAATCTTCCATGGGGACTT | + |
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Preference number: 5 (lower is better) Translates to: STREFCPLKNSRFYKTSHHHWTG*NLPWGL Trigger: AAGTCCCCATGGAAGATTCAAGCCTGTCCAGTGGTG...GTGTGAAGTTTTATAAAATCTGCTGTTCTTAAGTGGGCAGAACTCTCTGGTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS-3UTR CAA 90 bp | TCTACCAGAGAGTTCTGCCCACTTAAGAACAGCAGATTTTATAAAACTTCACACCAGATTTCAAATCTCTaGCTTGGGGGAGTCTACCAG | + |
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Preference number: 5 (lower is better) Translates to: STREFCPLKNSRFYKTSHQISNL*LGGVYQ Trigger: CTGGTAGACTCCCCCAAGCAAGAGATTTGAAATCTG...GTGTGAAGTTTTATAAAATCTGCTGTTCTTAAGTGGGCAGAACTCTCTGGTAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS-3UTR CAA 90 bp | GCTTCTAGTTTCAGGTGGACCTTACCAAGCATGATGACATTATGTTACATTACATTTCAAATCTCTTGCTaGGGGGAGTCTACCAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: ASSFRWTLPSMMTLCYITFQISC*GESTRF Trigger: AAACCTGGTAGACTCCCCCAAGCAAGAGATTTGAAA...TGTAATGTAACATAATGTCATCATGCTTGGTAAGGTCCACCTGAAACTAGAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS-3UTR CAA 90 bp | CAATCTGGTTACACTCTTCTTATAGGACATTTGGTTTCTGCTGAGCCTACATTTACTCAAGTACATCTCTaGGCAGCCTCTGTTTTTATC | + |
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Preference number: 5 (lower is better) Translates to: QSGYTLLIGHLVSAEPTFTQVHL*AASVFI Trigger: GATAAAAACAGAGGCTGCCAAGAGATGTACTTGAGT...AAATGTAGGCTCAGCAGAAACCAAATGTCCTATAAGAAGAGTGTAACCAGATTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS-3UTR CAA 90 bp | GCTTCTAGTTTCAGGTGGACCTTACCAAGCATGATGACATTATGTTACATTACACTTCTTATAGGACATTaGGTTTCTGCTGAGCCTACA | + |
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Preference number: 5 (lower is better) Translates to: ASSFRWTLPSMMTLCYITLLIGH*VSAEPT Trigger: TGTAGGCTCAGCAGAAACCAAATGTCCTATAAGAAG...TGTAATGTAACATAATGTCATCATGCTTGGTAAGGTCCACCTGAAACTAGAAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS CCA 72 bp | CCACATCAACACCACTGGACAGGCTTGAATCTTCCATaGGGACTTGCACCTCGTTACTGTTGTCCAGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: PHQHHWTGLNLP*GLAPRYCCPAP Trigger: TGGAGCTGGACAACAGTAACGAGGTGCAAGTCCCCATGGAAGATTCAAGCCTGTCCAGTGGTGTTGATGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS CCA 72 bp | TACTTCAGCTCAGAGATGGTTCTGTGGTTGTGGAGCTaGCCTTGTAGGGATTCTTCACCAGCTTGGCACACC | + |
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Preference number: 6 (lower is better) Translates to: YFSSEMVLWLWS*PCRDSSPAWHT Trigger: GGTGTGCCAAGCTGGTGAAGAATCCCTACAAGGCCAGCTCCACAACCACAGAACCATCTCTGAGCTGAAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS CAA 90 bp | AGGCAATGGCAAAGCCTTTGTCCACATCAACACCACTGGACAGGCTaGAATCTTCCATGGGGACTTGCACCTCGTTACTGTTGTCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: RQWQSLCPHQHHWTG*NLPWGLAPRYCCPA Trigger: AGCTGGACAACAGTAACGAGGTGCAAGTCCCCATGGAAGATTCAAGCCTGTCCAGTGGTGTTGATGTGGACAAAGGCTTTGCCATTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS CAA 90 bp | GTCATATTCCTTCTGAGAGCGGATATCCAAGGCTACATTCACTTGTaGCCAGGGCAGTCTCCTCCTACTCAAGTACATCTCTTGGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: VIFLLRADIQGYIHL*PGQSPPTQVHLLAA Trigger: GGCTGCCAAGAGATGTACTTGAGTAGGAGGAGACTGCCCTGGCAACAAGTGAATGTAGCCTTGGATATCCGCTCTCAGAAGGAATATGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS CAA 72 bp | CTTCTGAGAGCGGATATCCAAGGCTACATTCACTTGTaGCCAGGGCAGTCTCCTCCTACTCAAGTACATCTC | + |
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Preference number: 6 (lower is better) Translates to: LLRADIQGYIHL*PGQSPPTQVHL Trigger: GAGATGTACTTGAGTAGGAGGAGACTGCCCTGGCAACAAGTGAATGTAGCCTTGGATATCCGCTCTCAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS CAA 72 bp | TTGCCAGGGCAGTCTCCTCCTACTCAAGTACATCTCTaGGCAGCCTCTGTTTTTATCAACCTCTTCCCACAA | + |
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Preference number: 6 (lower is better) Translates to: LPGQSPPTQVHL*AASVFINLFPQ Trigger: TTGTGGGAAGAGGTTGATAAAAACAGAGGCTGCCAAGAGATGTACTTGAGTAGGAGGAGACTGCCCTGGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS CAA 72 bp | TTCCTTCTGAGAGCGGATATCCAAGGCTACATTCACTaGTTGCCAGGGCAGTCTCCTCCTACTCAAGTACAT | + |
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Preference number: 6 (lower is better) Translates to: FLLRADIQGYIH*LPGQSPPTQVH Trigger: ATGTACTTGAGTAGGAGGAGACTGCCCTGGCAACAAGTGAATGTAGCCTTGGATATCCGCTCTCAGAAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS CAA 90 bp | ATTCACTTGTTGCCAGGGCAGTCTCCTCCTACTCAAGTACATCTCTaGGCAGCCTCTGTTTTTATCAACCTCTTCCCACAAAAGGAGAGT | + |
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Preference number: 6 (lower is better) Translates to: IHLLPGQSPPTQVHL*AASVFINLFPQKES Trigger: ACTCTCCTTTTGTGGGAAGAGGTTGATAAAAACAGAGGCTGCCAAGAGATGTACTTGAGTAGGAGGAGACTGCCCTGGCAACAAGTGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS CAA 90 bp | TTTGTCATATTCCTTCTGAGAGCGGATATCCAAGGCTACATTCACTaGTTGCCAGGGCAGTCTCCTCCTACTCAAGTACATCTCTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: FVIFLLRADIQGYIH*LPGQSPPTQVHLLA Trigger: TGCCAAGAGATGTACTTGAGTAGGAGGAGACTGCCCTGGCAACAAGTGAATGTAGCCTTGGATATCCGCTCTCAGAAGGAATATGACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS CCA 72 bp | TTATTATACTTCAGCTCAGAGATGGTTCTGTGGTTGTaGAGCTGGCCTTGTAGGGATTCTTCACCAGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: LLYFSSEMVLWL*SWPCRDSSPAW Trigger: CCAAGCTGGTGAAGAATCCCTACAAGGCCAGCTCCACAACCACAGAACCATCTCTGAGCTGAAGTATAATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS CCA 72 bp | TTGTGGAGCTGGCCTTGTAGGGATTCTTCACCAGCTTaGCACACCGAAAAATCATCACTATTAGGAACAGAA | + |
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Preference number: 6 (lower is better) Translates to: LWSWPCRDSSPA*HTEKSSLLGTE Trigger: TTCTGTTCCTAATAGTGATGATTTTTCGGTGTGCCAAGCTGGTGAAGAATCCCTACAAGGCCAGCTCCACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS CAA 72 bp | AGAAACAGAAGAACAACAAAGGCAATGGCAAAGCCTTaGTCCACATCAACACCACTGGACAGGCTTGAATCT | + |
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Preference number: 6 (lower is better) Translates to: RNRRTTKAMAKP*STSTPLDRLES Trigger: AGATTCAAGCCTGTCCAGTGGTGTTGATGTGGACAAAGGCTTTGCCATTGCCTTTGTTGTTCTTCTGTTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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| CDS CCA 72 bp | TATAAAGTGTGTATAACAGATTTCAAATCTCTTGCTTaGGGGAGTCTACCAGGTTTTATTATACTTCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: YKVCITDFKSLA*GSLPGFIILQL Trigger: GAGCTGAAGTATAATAAAACCTGGTAGACTCCCCCAAGCAAGAGATTTGAAATCTGTTATACACACTTTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000636087.1 |
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