Pregenerated sensors for CTXN3 (Homo sapiens)
Ensembl gene IDs: ENSG00000205279Ensembl transcript IDs: ENST00000379445.7, ENST00000395322.3, ENST00000514851.1, ENST00000620385.1
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCTTCCCAAAGCTCCCTGCTTTGGGAGAAAACAAGAAACTACTTTaGGTCCATTCAGCACAATCTTCCTCATTCTGCTCAGGACCCAGA | + |
|
Preference number: 1 (lower is better) Translates to: CFPKLPALGENKKLL*VHSAQSSSFCSGPR Trigger: TCTGGGTCCTGAGCAGAATGAGGAAGATTGTGCTGAATGGACCCAAAGTAGTTTCTTGTTTTCTCCCAAAGCAGGGAGCTTTGGGAAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| 3UTR TCA 90 bp | CTTTCTAGTCTTTTATTCTTTAGTCAGATCAGGTGGTGTTTTGTTTaGTGGCAAATCTATGTCAGTATTAACGCTCTTGGTTTCACAATC | + |
|
Preference number: 1 (lower is better) Translates to: LSSLLFFSQIRWCFV*WQIYVSINALGFTI Trigger: GATTGTGAAACCAAGAGCGTTAATACTGACATAGATTTGCCATCAAACAAAACACCACCTGATCTGACTAAAGAATAAAAGACTAGAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| 3UTR CAA 90 bp | TTGCTTCCCAAAGCTCCCTGCTTTGGGAGAAAACAAGAAACTACTTaGGGTCCATTCAGCACAATCTTCCTCATTCTGCTCAGGACCCAG | + |
|
Preference number: 2 (lower is better) Translates to: LLPKAPCFGRKQETT*GPFSTIFLILLRTQ Trigger: CTGGGTCCTGAGCAGAATGAGGAAGATTGTGCTGAATGGACCCAAAGTAGTTTCTTGTTTTCTCCCAAAGCAGGGAGCTTTGGGAAGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| 3UTR-3UTR CCA 90 bp | ACTTTGGGTCCATTCAGCACAATCTTCCTCATTCTGCTCAGGACCCAGATAGGTTGGAATAATGGATTATaGTCCTGGGACCAAATATTG | + |
|
Preference number: 2 (lower is better) Translates to: TLGPFSTIFLILLRTQIGWNNGL*SWDQIL Trigger: CAATATTTGGTCCCAGGACCATAATCCATTATTCCA...ACCTATCTGGGTCCTGAGCAGAATGAGGAAGATTGTGCTGAATGGACCCAAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| 3UTR-3UTR CCA 90 bp | TTCCATTGCTTCCCAAAGCTCCCTGCTTTGGGAGAAAACAAGAAACTACTTTGGAAGGAAATCTCTTCCTaGCCTTGTCACCAGATTCAT | + |
|
Preference number: 2 (lower is better) Translates to: FHCFPKLPALGENKKLLWKEISS*PCHQIH Trigger: ATGAATCTGGTGACAAGGCCAGGAAGAGATTTCCTT...CCAAAGTAGTTTCTTGTTTTCTCCCAAAGCAGGGAGCTTTGGGAAGCAATGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| 3UTR-3UTR TCA 90 bp | TTAGAGCAAGGAAATCTCTTCCTGGCCTTGTCACCAGATTCATATGAGATCCTTAGGTGGTGTTTTGTTTaGTGGCAAATCTATGTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: LEQGNLFLALSPDSYEILRWCFV*WQIYVS Trigger: ACTGACATAGATTTGCCATCAAACAAAACACCACCT...AAGGATCTCATATGAATCTGGTGACAAGGCCAGGAAGAGATTTCCTTGCTCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| 3UTR-3UTR CCA 90 bp | TTAGAGCAAGGAAATCTCTTCCTGGCCTTGTCACCAGATTCATATGAGATCCTTTGGAATAATGGATTATaGTCCTGGGACCAAATATTG | + |
|
Preference number: 2 (lower is better) Translates to: LEQGNLFLALSPDSYEILWNNGL*SWDQIL Trigger: CAATATTTGGTCCCAGGACCATAATCCATTATTCCA...AAGGATCTCATATGAATCTGGTGACAAGGCCAGGAAGAGATTTCCTTGCTCTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| 3UTR CAA 90 bp | GGTGGTGTTTTGTTTGATGGCAAATCTATGTCAGTATTAACGCTCTaGGTTTCACAATCACACAATTTTAAGAGTACTCATTCATTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: GGVLFDGKSMSVLTL*VSQSHNFKSTHSLS Trigger: GCTCAATGAATGAGTACTCTTAAAATTGTGTGATTGTGAAACCAAGAGCGTTAATACTGACATAGATTTGCCATCAAACAAAACACCACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| 3UTR-3UTR CCA 90 bp | TTGTTTGATGGCAAATCTATGTCAGTATTAACGCTCTTGGTTTCACAATCACACTGGAATAATGGATTATaGTCCTGGGACCAAATATTG | + |
|
Preference number: 2 (lower is better) Translates to: LFDGKSMSVLTLLVSQSHWNNGL*SWDQIL Trigger: CAATATTTGGTCCCAGGACCATAATCCATTATTCCA...GTGTGATTGTGAAACCAAGAGCGTTAATACTGACATAGATTTGCCATCAAACAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| 3UTR CAA 90 bp | AGATCCTTTCTAGTCTTTTATTCTTTAGTCAGATCAGGTGGTGTTTaGTTTGATGGCAAATCTATGTCAGTATTAACGCTCTTGGTTTCA | + |
|
Preference number: 2 (lower is better) Translates to: RSFLVFYSLVRSGGV*FDGKSMSVLTLLVS Trigger: TGAAACCAAGAGCGTTAATACTGACATAGATTTGCCATCAAACAAAACACCACCTGATCTGACTAAAGAATAAAAGACTAGAAAGGATCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| 3UTR CCA 72 bp | AAGCTCCCTGCTTTGGGAGAAAACAAGAAACTACTTTaGGTCCATTCAGCACAATCTTCCTCATTCTGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: KLPALGENKKLL*VHSAQSSSFCS Trigger: TGAGCAGAATGAGGAAGATTGTGCTGAATGGACCCAAAGTAGTTTCTTGTTTTCTCCCAAAGCAGGGAGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| 3UTR-3UTR CAA 90 bp | ACTTTGGGTCCATTCAGCACAATCTTCCTCATTCTGCTCAGGACCCAGATAGGTTCAGTATTAACGCTCTaGGTTTCACAATCACACAAT | + |
|
Preference number: 3 (lower is better) Translates to: TLGPFSTIFLILLRTQIGSVLTL*VSQSHN Trigger: ATTGTGTGATTGTGAAACCAAGAGCGTTAATACTGA...ACCTATCTGGGTCCTGAGCAGAATGAGGAAGATTGTGCTGAATGGACCCAAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| 3UTR-3UTR CAA 90 bp | TTAGAGCAAGGAAATCTCTTCCTGGCCTTGTCACCAGATTCATATGAGATCCTTAGATCAGGTGGTGTTTaGTTTGATGGCAAATCTATG | + |
|
Preference number: 3 (lower is better) Translates to: LEQGNLFLALSPDSYEILRSGGV*FDGKSM Trigger: CATAGATTTGCCATCAAACAAAACACCACCTGATCT...AAGGATCTCATATGAATCTGGTGACAAGGCCAGGAAGAGATTTCCTTGCTCTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| 3UTR-3UTR CAA 90 bp | TTAGAGCAAGGAAATCTCTTCCTGGCCTTGTCACCAGATTCATATGAGATCCTTTCAGTATTAACGCTCTaGGTTTCACAATCACACAAT | + |
|
Preference number: 3 (lower is better) Translates to: LEQGNLFLALSPDSYEILSVLTL*VSQSHN Trigger: ATTGTGTGATTGTGAAACCAAGAGCGTTAATACTGA...AAGGATCTCATATGAATCTGGTGACAAGGCCAGGAAGAGATTTCCTTGCTCTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| 3UTR TCA 72 bp | CTTTTATTCTTTAGTCAGATCAGGTGGTGTTTTGTTTaGTGGCAAATCTATGTCAGTATTAACGCTCTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LLFFSQIRWCFV*WQIYVSINALG Trigger: ACCAAGAGCGTTAATACTGACATAGATTTGCCATCAAACAAAACACCACCTGATCTGACTAAAGAATAAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR CCA 90 bp | TCACCAAGACACAAAGCACTTCATCTCCTCAGGAGGAGATCCCACACCATCCCTCTGCGGAGGTCATGGTaGCTGCACTCTGGAGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SPRHKALHLLRRRSHTIPLRRSW*LHSGEA Trigger: AGCCTCTCCAGAGTGCAGCCACCATGACCTCCGCAG...AGGGATGGTGTGGGATCTCCTCCTGAGGAGATGAAGTGCTTTGTGTCTTGGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR GCA 90 bp | TCACCAAGACACAAAGCACTTCATCTCCTCAGGAGGAGATCCCACACCATCCCTGGAGGTCATGGTGGCTaGACTCTGGAGAGGCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SPRHKALHLLRRRSHTIPGGHGG*TLERLS Trigger: ACTCAGCCTCTCCAGAGTGCAGCCACCATGACCTCC...AGGGATGGTGTGGGATCTCCTCCTGAGGAGATGAAGTGCTTTGTGTCTTGGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR CCA 90 bp | TCACCAAGACACAAAGCACTTCATCTCCTCAGGAGGAGATCCCACACCATCCCTCTAGGGATGAGGGGATaGGCTGTCCTCCATCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SPRHKALHLLRRRSHTIPLGMRG*AVLHPW Trigger: CCATGGATGGAGGACAGCCCATCCCCTCATCCCTAG...AGGGATGGTGTGGGATCTCCTCCTGAGGAGATGAAGTGCTTTGTGTCTTGGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR GCA 90 bp | TCACCAAGACACAAAGCACTTCATCTCCTCAGGAGGAGATCCCACACCATCCCTAGGGCATGGTCGAACTaGCCTTTCTCCAGGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SPRHKALHLLRRRSHTIPRAWSN*PFSRPS Trigger: TGAAGGCCTGGAGAAAGGGCAGTTCGACCATGCCCT...AGGGATGGTGTGGGATCTCCTCCTGAGGAGATGAAGTGCTTTGTGTCTTGGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR CCA 90 bp | ACTTTGGGTCCATTCAGCACAATCTTCCTCATTCTGCTCAGGACCCAGATAGGTCTGCGGAGGTCATGGTaGCTGCACTCTGGAGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TLGPFSTIFLILLRTQIGLRRSW*LHSGEA Trigger: AGCCTCTCCAGAGTGCAGCCACCATGACCTCCGCAG...ACCTATCTGGGTCCTGAGCAGAATGAGGAAGATTGTGCTGAATGGACCCAAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR CCA 90 bp | ACTTTGGGTCCATTCAGCACAATCTTCCTCATTCTGCTCAGGACCCAGATAGGTGCTGTCCTCCATCCATaGTCCAGGGAAGCCAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TLGPFSTIFLILLRTQIGAVLHP*SREARA Trigger: TGCTCTGGCTTCCCTGGACCATGGATGGAGGACAGC...ACCTATCTGGGTCCTGAGCAGAATGAGGAAGATTGTGCTGAATGGACCCAAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR CCA 90 bp | TCACCAAGACACAAAGCACTTCATCTCCTCAGGAGGAGATCCCACACCATCCCTAGCCCAGGTAGAGGTTaGCATGCTTCGATATGGATC | + |
|
Preference number: 4 (lower is better) Translates to: SPRHKALHLLRRRSHTIPSPGRG*HASIWI Trigger: GATCCATATCGAAGCATGCCAACCTCTACCTGGGCT...AGGGATGGTGTGGGATCTCCTCCTGAGGAGATGAAGTGCTTTGTGTCTTGGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR TCA 90 bp | TCACCAAGACACAAAGCACTTCATCTCCTCAGGAGGAGATCCCACACCATCCCTCATCGTCTTTCTGTGTaGGGCATCATTAACGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SPRHKALHLLRRRSHTIPHRLSV*GIINGQ Trigger: TTGGCCGTTAATGATGCCTCACACAGAAAGACGATG...AGGGATGGTGTGGGATCTCCTCCTGAGGAGATGAAGTGCTTTGTGTCTTGGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379445.7 |
||
| CDS-3UTR TCA 90 bp | ACTTTGGGTCCATTCAGCACAATCTTCCTCATTCTGCTCAGGACCCAGATAGGTCATGCTAGAATCTGCTaGTTCGTTCCCAAGGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TLGPFSTIFLILLRTQIGHARIC*FVPKGH Trigger: GTGCCCCTTGGGAACGAATCAGCAGATTCTAGCATG...ACCTATCTGGGTCCTGAGCAGAATGAGGAAGATTGTGCTGAATGGACCCAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR GCA 90 bp | ACTTTGGGTCCATTCAGCACAATCTTCCTCATTCTGCTCAGGACCCAGATAGGTCTTCCATCATCAATCTaGGGAGGTCATGGTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TLGPFSTIFLILLRTQIGLPSSI*GGHGGC Trigger: GCAGCCACCATGACCTCCGCAGATTGATGATGGAAG...ACCTATCTGGGTCCTGAGCAGAATGAGGAAGATTGTGCTGAATGGACCCAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR CCA 90 bp | ACACTAAATAAAGGGAATCCTCACCAAGACACAAAGCACTTCATCTCCTCAGGACTGCGGAGGTCATGGTaGCTGCACTCTGGAGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TLNKGNPHQDTKHFISSGLRRSW*LHSGEA Trigger: AGCCTCTCCAGAGTGCAGCCACCATGACCTCCGCAG...TCCTGAGGAGATGAAGTGCTTTGTGTCTTGGTGAGGATTCCCTTTATTTAGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR GCA 90 bp | ACACTAAATAAAGGGAATCCTCACCAAGACACAAAGCACTTCATCTCCTCAGGAGGAGGTCATGGTGGCTaGACTCTGGAGAGGCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TLNKGNPHQDTKHFISSGGGHGG*TLERLS Trigger: ACTCAGCCTCTCCAGAGTGCAGCCACCATGACCTCC...TCCTGAGGAGATGAAGTGCTTTGTGTCTTGGTGAGGATTCCCTTTATTTAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR GCA 90 bp | TCACCAAGACACAAAGCACTTCATCTCCTCAGGAGGAGATCCCACACCATCCCTCTTCCCAAAGCTCCCTaGTTTGGGAGAAAACAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SPRHKALHLLRRRSHTIPLPKAP*FGRKQE Trigger: TTCTTGTTTTCTCCCAAAGCAGGGAGCTTTGGGAAG...AGGGATGGTGTGGGATCTCCTCCTGAGGAGATGAAGTGCTTTGTGTCTTGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR GCA 90 bp | ACTTTGGGTCCATTCAGCACAATCTTCCTCATTCTGCTCAGGACCCAGATAGGTCTCATCCCTTGCCCATaGTTCCTACACACTGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: TLGPFSTIFLILLRTQIGLIPCP*FLHTAS Trigger: AGATGCAGTGTGTAGGAAGCATGGGCAAGGGATGAG...ACCTATCTGGGTCCTGAGCAGAATGAGGAAGATTGTGCTGAATGGACCCAAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395322.3 |
||
| CDS-3UTR CCA 90 bp | TTCCATTGCTTCCCAAAGCTCCCTGCTTTGGGAGAAAACAAGAAACTACTTTGGAATCTGCGGAGGTCATaGTGGCTGCACTCTGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FHCFPKLPALGENKKLLWNLRRS*WLHSGE Trigger: CTCTCCAGAGTGCAGCCACCATGACCTCCGCAGATT...CCAAAGTAGTTTCTTGTTTTCTCCCAAAGCAGGGAGCTTTGGGAAGCAATGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR CCA 90 bp | ACACTAAATAAAGGGAATCCTCACCAAGACACAAAGCACTTCATCTCCTCAGGAGCTGTCCTCCATCCATaGTCCAGGGAAGCCAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TLNKGNPHQDTKHFISSGAVLHP*SREARA Trigger: TGCTCTGGCTTCCCTGGACCATGGATGGAGGACAGC...TCCTGAGGAGATGAAGTGCTTTGTGTCTTGGTGAGGATTCCCTTTATTTAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR CCA 90 bp | AGCAAGGAAATCTCTTCCTGGCCTTGTCACCAGATTCATATGAGATCCTTTCTAGCTGTCCTCCATCCATaGTCCAGGGAAGCCAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SKEISSWPCHQIHMRSFLAVLHP*SREARA Trigger: TGCTCTGGCTTCCCTGGACCATGGATGGAGGACAGC...TAGAAAGGATCTCATATGAATCTGGTGACAAGGCCAGGAAGAGATTTCCTTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR CCA 90 bp | ACACTAAATAAAGGGAATCCTCACCAAGACACAAAGCACTTCATCTCCTCAGGACTAGGGATGAGGGGATaGGCTGTCCTCCATCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: TLNKGNPHQDTKHFISSGLGMRG*AVLHPW Trigger: CCATGGATGGAGGACAGCCCATCCCCTCATCCCTAG...TCCTGAGGAGATGAAGTGCTTTGTGTCTTGGTGAGGATTCCCTTTATTTAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR GCA 90 bp | TTCCATTGCTTCCCAAAGCTCCCTGCTTTGGGAGAAAACAAGAAACTACTTTGGCTTCCATCATCAATCTaGGGAGGTCATGGTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FHCFPKLPALGENKKLLWLPSSI*GGHGGC Trigger: GCAGCCACCATGACCTCCGCAGATTGATGATGGAAG...CCAAAGTAGTTTCTTGTTTTCTCCCAAAGCAGGGAGCTTTGGGAAGCAATGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR GCA 90 bp | ACACTAAATAAAGGGAATCCTCACCAAGACACAAAGCACTTCATCTCCTCAGGAAGGGCATGGTCGAACTaGCCTTTCTCCAGGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TLNKGNPHQDTKHFISSGRAWSN*PFSRPS Trigger: TGAAGGCCTGGAGAAAGGGCAGTTCGACCATGCCCT...TCCTGAGGAGATGAAGTGCTTTGTGTCTTGGTGAGGATTCCCTTTATTTAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR GCA 90 bp | TCACCAAGACACAAAGCACTTCATCTCCTCAGGAGGAGATCCCACACCATCCCTTTTAAGCTTTTCCATTaGTTCCCAAAGCTCCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SPRHKALHLLRRRSHTIPFKLFH*FPKLPA Trigger: AGCAGGGAGCTTTGGGAAGCAATGGAAAAGCTTAAA...AGGGATGGTGTGGGATCTCCTCCTGAGGAGATGAAGTGCTTTGTGTCTTGGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR CCA 90 bp | AGCAAGGAAATCTCTTCCTGGCCTTGTCACCAGATTCATATGAGATCCTTTCTAAATCTGCGGAGGTCATaGTGGCTGCACTCTGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SKEISSWPCHQIHMRSFLNLRRS*WLHSGE Trigger: CTCTCCAGAGTGCAGCCACCATGACCTCCGCAGATT...TAGAAAGGATCTCATATGAATCTGGTGACAAGGCCAGGAAGAGATTTCCTTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR TCA 90 bp | TTAGAGCAAGGAAATCTCTTCCTGGCCTTGTCACCAGATTCATATGAGATCCTTCATGCTAGAATCTGCTaGTTCGTTCCCAAGGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LEQGNLFLALSPDSYEILHARIC*FVPKGH Trigger: GTGCCCCTTGGGAACGAATCAGCAGATTCTAGCATG...AAGGATCTCATATGAATCTGGTGACAAGGCCAGGAAGAGATTTCCTTGCTCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR TCA 90 bp | ACACTAAATAAAGGGAATCCTCACCAAGACACAAAGCACTTCATCTCCTCAGGACATGCTAGAATCTGCTaGTTCGTTCCCAAGGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TLNKGNPHQDTKHFISSGHARIC*FVPKGH Trigger: GTGCCCCTTGGGAACGAATCAGCAGATTCTAGCATG...TCCTGAGGAGATGAAGTGCTTTGTGTCTTGGTGAGGATTCCCTTTATTTAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR TCA 90 bp | TCACCAAGACACAAAGCACTTCATCTCCTCAGGAGGAGATCCCACACCATCCCTAGGTGGTGTTTTGTTTaGTGGCAAATCTATGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SPRHKALHLLRRRSHTIPRWCFV*WQIYVS Trigger: ACTGACATAGATTTGCCATCAAACAAAACACCACCT...AGGGATGGTGTGGGATCTCCTCCTGAGGAGATGAAGTGCTTTGTGTCTTGGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR GCA 90 bp | ATCTCTTCCTGGCCTTGTCACCAGATTCATATGAGATCCTTTCTAGTCTTTTATGGAGGTCATGGTGGCTaGACTCTGGAGAGGCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ISSWPCHQIHMRSFLVFYGGHGG*TLERLS Trigger: ACTCAGCCTCTCCAGAGTGCAGCCACCATGACCTCC...ATAAAAGACTAGAAAGGATCTCATATGAATCTGGTGACAAGGCCAGGAAGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR GCA 90 bp | AGCAAGGAAATCTCTTCCTGGCCTTGTCACCAGATTCATATGAGATCCTTTCTACTTCCATCATCAATCTaGGGAGGTCATGGTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SKEISSWPCHQIHMRSFLLPSSI*GGHGGC Trigger: GCAGCCACCATGACCTCCGCAGATTGATGATGGAAG...TAGAAAGGATCTCATATGAATCTGGTGACAAGGCCAGGAAGAGATTTCCTTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR GCA 90 bp | AGCAAGGAAATCTCTTCCTGGCCTTGTCACCAGATTCATATGAGATCCTTTCTAAGCAGGCGTAGTCATTaGAGCCAGGGTCATTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: SKEISSWPCHQIHMRSFLSRRSH*SQGHSH Trigger: GTGTGAATGACCCTGGCTGCAATGACTACGCCTGCT...TAGAAAGGATCTCATATGAATCTGGTGACAAGGCCAGGAAGAGATTTCCTTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395322.3 |
||
| CDS-3UTR CCA 90 bp | TCACCAAGACACAAAGCACTTCATCTCCTCAGGAGGAGATCCCACACCATCCCTGAGCACAGGATATCCTaGTTTTCTTTTCTTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: SPRHKALHLLRRRSHTIPEHRIS*FSFLPS Trigger: TGATGGAAGAAAAGAAAACCAGGATATCCTGTGCTC...AGGGATGGTGTGGGATCTCCTCCTGAGGAGATGAAGTGCTTTGTGTCTTGGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR GCA 90 bp | ATCTCTTCCTGGCCTTGTCACCAGATTCATATGAGATCCTTTCTAGTCTTTTATAGGGCATGGTCGAACTaGCCTTTCTCCAGGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ISSWPCHQIHMRSFLVFYRAWSN*PFSRPS Trigger: TGAAGGCCTGGAGAAAGGGCAGTTCGACCATGCCCT...ATAAAAGACTAGAAAGGATCTCATATGAATCTGGTGACAAGGCCAGGAAGAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR GCA 90 bp | TCACCAAGACACAAAGCACTTCATCTCCTCAGGAGGAGATCCCACACCATCCCTATGCTTCCTACACACTaGATCTCGATTCATCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SPRHKALHLLRRRSHTIPMLPTH*ISIHLF Trigger: AAAAAGATGAATCGAGATGCAGTGTGTAGGAAGCAT...AGGGATGGTGTGGGATCTCCTCCTGAGGAGATGAAGTGCTTTGTGTCTTGGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395322.3 |
||
| CDS-3UTR CCA 90 bp | ACACTAAATAAAGGGAATCCTCACCAAGACACAAAGCACTTCATCTCCTCAGGAAGCCCAGGTAGAGGTTaGCATGCTTCGATATGGATC | + |
|
Preference number: 4 (lower is better) Translates to: TLNKGNPHQDTKHFISSGSPGRG*HASIWI Trigger: GATCCATATCGAAGCATGCCAACCTCTACCTGGGCT...TCCTGAGGAGATGAAGTGCTTTGTGTCTTGGTGAGGATTCCCTTTATTTAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR TCA 90 bp | ACACTAAATAAAGGGAATCCTCACCAAGACACAAAGCACTTCATCTCCTCAGGAGCTGCTTCTTTGAGGTaGGCCATGATTTCAGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TLNKGNPHQDTKHFISSGAASLR*AMISVL Trigger: CAGAACTGAAATCATGGCTCACCTCAAAGAAGCAGC...TCCTGAGGAGATGAAGTGCTTTGTGTCTTGGTGAGGATTCCCTTTATTTAGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379445.7 |
||
| CDS-3UTR TCA 90 bp | ACTTTGGGTCCATTCAGCACAATCTTCCTCATTCTGCTCAGGACCCAGATAGGTAGGTGGTGTTTTGTTTaGTGGCAAATCTATGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TLGPFSTIFLILLRTQIGRWCFV*WQIYVS Trigger: ACTGACATAGATTTGCCATCAAACAAAACACCACCT...ACCTATCTGGGTCCTGAGCAGAATGAGGAAGATTGTGCTGAATGGACCCAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR GCA 90 bp | AGCAAGGAAATCTCTTCCTGGCCTTGTCACCAGATTCATATGAGATCCTTTCTAAACGGCCAATACTGCTaGTTCTTTGAGGTGAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SKEISSWPCHQIHMRSFLNGQYC*FFEVSH Trigger: ATGGCTCACCTCAAAGAAGCAGCAGTATTGGCCGTT...TAGAAAGGATCTCATATGAATCTGGTGACAAGGCCAGGAAGAGATTTCCTTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379445.7 |
||
| CDS-3UTR GCA 90 bp | ATCTCTTCCTGGCCTTGTCACCAGATTCATATGAGATCCTTTCTAGTCTTTTATGTAGACAGTGGTAGCTaGAAGGCAGCTGATGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: ISSWPCHQIHMRSFLVFYVDSGS*KAADGT Trigger: TGTGCCATCAGCTGCCTTGCAGCTACCACTGTCTAC...ATAAAAGACTAGAAAGGATCTCATATGAATCTGGTGACAAGGCCAGGAAGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000379445.7 |
||
| CDS-3UTR GCA 90 bp | ACTTTGGGTCCATTCAGCACAATCTTCCTCATTCTGCTCAGGACCCAGATAGGTACAAATGTCATTTTCTaGTCCAGGGACATGCTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TLGPFSTIFLILLRTQIGTNVIF*SRDMLE Trigger: TTCTAGCATGTCCCTGGAGCAGAAAATGACATTTGT...ACCTATCTGGGTCCTGAGCAGAATGAGGAAGATTGTGCTGAATGGACCCAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR GCA 90 bp | ATCTCTTCCTGGCCTTGTCACCAGATTCATATGAGATCCTTTCTAGTCTTTTATGCGTTCCTCATCCCTTaGCCATGCTTCCTACACACT | + |
|
Preference number: 4 (lower is better) Translates to: ISSWPCHQIHMRSFLVFYAFLIP*PCFLHT Trigger: AGTGTGTAGGAAGCATGGGCAAGGGATGAGGAACGC...ATAAAAGACTAGAAAGGATCTCATATGAATCTGGTGACAAGGCCAGGAAGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395322.3 |
||
| CDS-3UTR CCA 90 bp | ACTTTGGGTCCATTCAGCACAATCTTCCTCATTCTGCTCAGGACCCAGATAGGTGAGCACAGGATATCCTaGTTTTCTTTTCTTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: TLGPFSTIFLILLRTQIGEHRIS*FSFLPS Trigger: TGATGGAAGAAAAGAAAACCAGGATATCCTGTGCTC...ACCTATCTGGGTCCTGAGCAGAATGAGGAAGATTGTGCTGAATGGACCCAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| 3UTR CAA 72 bp | AAAGCTCCCTGCTTTGGGAGAAAACAAGAAACTACTTaGGGTCCATTCAGCACAATCTTCCTCATTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KAPCFGRKQETT*GPFSTIFLILL Trigger: GAGCAGAATGAGGAAGATTGTGCTGAATGGACCCAAAGTAGTTTCTTGTTTTCTCCCAAAGCAGGGAGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR GCA 90 bp | ACACTAAATAAAGGGAATCCTCACCAAGACACAAAGCACTTCATCTCCTCAGGACTTCCCAAAGCTCCCTaGTTTGGGAGAAAACAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TLNKGNPHQDTKHFISSGLPKAP*FGRKQE Trigger: TTCTTGTTTTCTCCCAAAGCAGGGAGCTTTGGGAAG...TCCTGAGGAGATGAAGTGCTTTGTGTCTTGGTGAGGATTCCCTTTATTTAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR GCA 90 bp | TTCCATTGCTTCCCAAAGCTCCCTGCTTTGGGAGAAAACAAGAAACTACTTTGGACAAATGTCATTTTCTaGTCCAGGGACATGCTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FHCFPKLPALGENKKLLWTNVIF*SRDMLE Trigger: TTCTAGCATGTCCCTGGAGCAGAAAATGACATTTGT...CCAAAGTAGTTTCTTGTTTTCTCCCAAAGCAGGGAGCTTTGGGAAGCAATGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR CCA 90 bp | TTGTTTGATGGCAAATCTATGTCAGTATTAACGCTCTTGGTTTCACAATCACACAGCCCAGGTAGAGGTTaGCATGCTTCGATATGGATC | + |
|
Preference number: 4 (lower is better) Translates to: LFDGKSMSVLTLLVSQSHSPGRG*HASIWI Trigger: GATCCATATCGAAGCATGCCAACCTCTACCTGGGCT...GTGTGATTGTGAAACCAAGAGCGTTAATACTGACATAGATTTGCCATCAAACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR CCA 90 bp | AGCAAGGAAATCTCTTCCTGGCCTTGTCACCAGATTCATATGAGATCCTTTCTAAAGGAAATCTCTTCCTaGCCTTGTCACCAGATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SKEISSWPCHQIHMRSFLKEISS*PCHQIH Trigger: ATGAATCTGGTGACAAGGCCAGGAAGAGATTTCCTT...TAGAAAGGATCTCATATGAATCTGGTGACAAGGCCAGGAAGAGATTTCCTTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR GCA 90 bp | TTAGAGCAAGGAAATCTCTTCCTGGCCTTGTCACCAGATTCATATGAGATCCTTACAAATGTCATTTTCTaGTCCAGGGACATGCTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LEQGNLFLALSPDSYEILTNVIF*SRDMLE Trigger: TTCTAGCATGTCCCTGGAGCAGAAAATGACATTTGT...AAGGATCTCATATGAATCTGGTGACAAGGCCAGGAAGAGATTTCCTTGCTCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR CCA 90 bp | AGCAAGGAAATCTCTTCCTGGCCTTGTCACCAGATTCATATGAGATCCTTTCTAGAGCACAGGATATCCTaGTTTTCTTTTCTTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: SKEISSWPCHQIHMRSFLEHRIS*FSFLPS Trigger: TGATGGAAGAAAAGAAAACCAGGATATCCTGTGCTC...TAGAAAGGATCTCATATGAATCTGGTGACAAGGCCAGGAAGAGATTTCCTTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR CCA 90 bp | TTCCATTGCTTCCCAAAGCTCCCTGCTTTGGGAGAAAACAAGAAACTACTTTGGTGGAATAATGGATTATaGTCCTGGGACCAAATATTG | + |
|
Preference number: 4 (lower is better) Translates to: FHCFPKLPALGENKKLLWWNNGL*SWDQIL Trigger: CAATATTTGGTCCCAGGACCATAATCCATTATTCCA...CCAAAGTAGTTTCTTGTTTTCTCCCAAAGCAGGGAGCTTTGGGAAGCAATGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR TCA 90 bp | ACACTAAATAAAGGGAATCCTCACCAAGACACAAAGCACTTCATCTCCTCAGGACCAGATAGGTGCCCATaGAATAAAACAAATATAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TLNKGNPHQDTKHFISSGPDRCP*NKTNID Trigger: GTCTATATTTGTTTTATTTCATGGGCACCTATCTGG...TCCTGAGGAGATGAAGTGCTTTGTGTCTTGGTGAGGATTCCCTTTATTTAGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR GCA 90 bp | ATCTCTTCCTGGCCTTGTCACCAGATTCATATGAGATCCTTTCTAGTCTTTTATTTTAAGCTTTTCCATTaGTTCCCAAAGCTCCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ISSWPCHQIHMRSFLVFYFKLFH*FPKLPA Trigger: AGCAGGGAGCTTTGGGAAGCAATGGAAAAGCTTAAA...ATAAAAGACTAGAAAGGATCTCATATGAATCTGGTGACAAGGCCAGGAAGAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR CCA 90 bp | AGCAAGGAAATCTCTTCCTGGCCTTGTCACCAGATTCATATGAGATCCTTTCTATGGAATAATGGATTATaGTCCTGGGACCAAATATTG | + |
|
Preference number: 4 (lower is better) Translates to: SKEISSWPCHQIHMRSFLWNNGL*SWDQIL Trigger: CAATATTTGGTCCCAGGACCATAATCCATTATTCCA...TAGAAAGGATCTCATATGAATCTGGTGACAAGGCCAGGAAGAGATTTCCTTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR CCA 90 bp | ATCTCTTCCTGGCCTTGTCACCAGATTCATATGAGATCCTTTCTAGTCTTTTATAAGGAAATCTCTTCCTaGCCTTGTCACCAGATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ISSWPCHQIHMRSFLVFYKEISS*PCHQIH Trigger: ATGAATCTGGTGACAAGGCCAGGAAGAGATTTCCTT...ATAAAAGACTAGAAAGGATCTCATATGAATCTGGTGACAAGGCCAGGAAGAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR GCA 90 bp | TTGTTTGATGGCAAATCTATGTCAGTATTAACGCTCTTGGTTTCACAATCACACTTTAAGCTTTTCCATTaGTTCCCAAAGCTCCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LFDGKSMSVLTLLVSQSHFKLFH*FPKLPA Trigger: AGCAGGGAGCTTTGGGAAGCAATGGAAAAGCTTAAA...GTGTGATTGTGAAACCAAGAGCGTTAATACTGACATAGATTTGCCATCAAACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR CCA 90 bp | ATCTCTTCCTGGCCTTGTCACCAGATTCATATGAGATCCTTTCTAGTCTTTTATAACAAGAAACTACTTTaGGTCCATTCAGCACAATCT | + |
|
Preference number: 4 (lower is better) Translates to: ISSWPCHQIHMRSFLVFYNKKLL*VHSAQS Trigger: AGATTGTGCTGAATGGACCCAAAGTAGTTTCTTGTT...ATAAAAGACTAGAAAGGATCTCATATGAATCTGGTGACAAGGCCAGGAAGAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR CCA 90 bp | TTGTTTGATGGCAAATCTATGTCAGTATTAACGCTCTTGGTTTCACAATCACACAACAAGAAACTACTTTaGGTCCATTCAGCACAATCT | + |
|
Preference number: 4 (lower is better) Translates to: LFDGKSMSVLTLLVSQSHNKKLL*VHSAQS Trigger: AGATTGTGCTGAATGGACCCAAAGTAGTTTCTTGTT...GTGTGATTGTGAAACCAAGAGCGTTAATACTGACATAGATTTGCCATCAAACAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS CCA 90 bp | CTGCCCTTTCTCCAGGCCTTCAAGTCCATCAGCCCAGGTAGAGGTTaGCATGCTTCGATATGGATCCAAAAGAATCCGGAAGCACCGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LPFLQAFKSISPGRG*HASIWIQKNPEAPD Trigger: GTCCGGTGCTTCCGGATTCTTTTGGATCCATATCGAAGCATGCCAACCTCTACCTGGGCTGATGGACTTGAAGGCCTGGAGAAAGGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS CCA 90 bp | CTGTCCTCCATCCATGGTCCAGGGAAGCCAGAGCACAGGATATCCTaGTTTTCTTTTCTTCCATCATCAATCTGCGGAGGTCATGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LSSIHGPGKPEHRIS*FSFLPSSICGGHGG Trigger: GCCACCATGACCTCCGCAGATTGATGATGGAAGAAAAGAAAACCAGGATATCCTGTGCTCTGGCTTCCCTGGACCATGGATGGAGGACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR CAA 90 bp | TCACCAAGACACAAAGCACTTCATCTCCTCAGGAGGAGATCCCACACCATCCCTCCAAAGCTCCCTGCTTaGGGAGAAAACAAGAAACTA | + |
|
Preference number: 5 (lower is better) Translates to: SPRHKALHLLRRRSHTIPPKLPA*GENKKL Trigger: TAGTTTCTTGTTTTCTCCCAAAGCAGGGAGCTTTGG...AGGGATGGTGTGGGATCTCCTCCTGAGGAGATGAAGTGCTTTGTGTCTTGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS TCA 90 bp | CTGTGTGAGGCATCATTAACGGCCAATACTGCTGCTTCTTTGAGGTaGGCCATGATTTCAGTTCTGCCTCAGCAACTCTTCAGAGGATTC | + |
|
Preference number: 5 (lower is better) Translates to: LCEASLTANTAASLR*AMISVLPQQLFRGF Trigger: GAATCCTCTGAAGAGTTGCTGAGGCAGAACTGAAATCATGGCTCACCTCAAAGAAGCAGCAGTATTGGCCGTTAATGATGCCTCACACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379445.7 |
||
| CDS GCA 90 bp | TTTCAAAGTGGCGTTCCTCATCCCTTGCCCATGCTTCCTACACACTaGATCTCGATTCATCTTTTTAAGCCCAGATCTCACCACTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: FQSGVPHPLPMLPTH*ISIHLFKPRSHHSS Trigger: GGAAGAGTGGTGAGATCTGGGCTTAAAAAGATGAATCGAGATGCAGTGTGTAGGAAGCATGGGCAAGGGATGAGGAACGCCACTTTGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000514851.1 |
||
| CDS-3UTR CAA 90 bp | TCACCAAGACACAAAGCACTTCATCTCCTCAGGAGGAGATCCCACACCATCCCTAGATCAGGTGGTGTTTaGTTTGATGGCAAATCTATG | + |
|
Preference number: 5 (lower is better) Translates to: SPRHKALHLLRRRSHTIPRSGGV*FDGKSM Trigger: CATAGATTTGCCATCAAACAAAACACCACCTGATCT...AGGGATGGTGTGGGATCTCCTCCTGAGGAGATGAAGTGCTTTGTGTCTTGGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR CAA 90 bp | TCACCAAGACACAAAGCACTTCATCTCCTCAGGAGGAGATCCCACACCATCCCTTCAGTATTAACGCTCTaGGTTTCACAATCACACAAT | + |
|
Preference number: 5 (lower is better) Translates to: SPRHKALHLLRRRSHTIPSVLTL*VSQSHN Trigger: ATTGTGTGATTGTGAAACCAAGAGCGTTAATACTGA...AGGGATGGTGTGGGATCTCCTCCTGAGGAGATGAAGTGCTTTGTGTCTTGGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR CAA 90 bp | TTGTTTGATGGCAAATCTATGTCAGTATTAACGCTCTTGGTTTCACAATCACACGGCGTTCCTCATCCCTaGCCCATGCTTCCTACACAC | + |
|
Preference number: 5 (lower is better) Translates to: LFDGKSMSVLTLLVSQSHGVPHP*PMLPTH Trigger: GTGTGTAGGAAGCATGGGCAAGGGATGAGGAACGCC...GTGTGATTGTGAAACCAAGAGCGTTAATACTGACATAGATTTGCCATCAAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395322.3 |
||
| CDS-3UTR CAA 90 bp | TTAGAGCAAGGAAATCTCTTCCTGGCCTTGTCACCAGATTCATATGAGATCCTTAATCTCTTCCTGGCCTaGTCACCAGATTCATATGAG | + |
|
Preference number: 5 (lower is better) Translates to: LEQGNLFLALSPDSYEILNLFLA*SPDSYE Trigger: CTCATATGAATCTGGTGACAAGGCCAGGAAGAGATT...AAGGATCTCATATGAATCTGGTGACAAGGCCAGGAAGAGATTTCCTTGCTCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR CAA 90 bp | AGCAAGGAAATCTCTTCCTGGCCTTGTCACCAGATTCATATGAGATCCTTTCTACCAAAGCTCCCTGCTTaGGGAGAAAACAAGAAACTA | + |
|
Preference number: 5 (lower is better) Translates to: SKEISSWPCHQIHMRSFLPKLPA*GENKKL Trigger: TAGTTTCTTGTTTTCTCCCAAAGCAGGGAGCTTTGG...TAGAAAGGATCTCATATGAATCTGGTGACAAGGCCAGGAAGAGATTTCCTTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR CAA 90 bp | TTAGAGCAAGGAAATCTCTTCCTGGCCTTGTCACCAGATTCATATGAGATCCTTCAGGTGGTGTTTTGTTaGATGGCAAATCTATGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LEQGNLFLALSPDSYEILQVVFC*MANLCQ Trigger: CTGACATAGATTTGCCATCAAACAAAACACCACCTG...AAGGATCTCATATGAATCTGGTGACAAGGCCAGGAAGAGATTTCCTTGCTCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR CAA 90 bp | AGCAAGGAAATCTCTTCCTGGCCTTGTCACCAGATTCATATGAGATCCTTTCTAAGATCAGGTGGTGTTTaGTTTGATGGCAAATCTATG | + |
|
Preference number: 5 (lower is better) Translates to: SKEISSWPCHQIHMRSFLRSGGV*FDGKSM Trigger: CATAGATTTGCCATCAAACAAAACACCACCTGATCT...TAGAAAGGATCTCATATGAATCTGGTGACAAGGCCAGGAAGAGATTTCCTTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR CAA 90 bp | ATCTCTTCCTGGCCTTGTCACCAGATTCATATGAGATCCTTTCTAGTCTTTTATAATCTCTTCCTGGCCTaGTCACCAGATTCATATGAG | + |
|
Preference number: 5 (lower is better) Translates to: ISSWPCHQIHMRSFLVFYNLFLA*SPDSYE Trigger: CTCATATGAATCTGGTGACAAGGCCAGGAAGAGATT...ATAAAAGACTAGAAAGGATCTCATATGAATCTGGTGACAAGGCCAGGAAGAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR CAA 90 bp | AGCAAGGAAATCTCTTCCTGGCCTTGTCACCAGATTCATATGAGATCCTTTCTAAAACAAGAAACTACTTaGGGTCCATTCAGCACAATC | + |
|
Preference number: 5 (lower is better) Translates to: SKEISSWPCHQIHMRSFLKQETT*GPFSTI Trigger: GATTGTGCTGAATGGACCCAAAGTAGTTTCTTGTTT...TAGAAAGGATCTCATATGAATCTGGTGACAAGGCCAGGAAGAGATTTCCTTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR CAA 90 bp | ATCTCTTCCTGGCCTTGTCACCAGATTCATATGAGATCCTTTCTAGTCTTTTATCCAAAGCTCCCTGCTTaGGGAGAAAACAAGAAACTA | + |
|
Preference number: 5 (lower is better) Translates to: ISSWPCHQIHMRSFLVFYPKLPA*GENKKL Trigger: TAGTTTCTTGTTTTCTCCCAAAGCAGGGAGCTTTGG...ATAAAAGACTAGAAAGGATCTCATATGAATCTGGTGACAAGGCCAGGAAGAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR CAA 90 bp | AGCAAGGAAATCTCTTCCTGGCCTTGTCACCAGATTCATATGAGATCCTTTCTATCAGTATTAACGCTCTaGGTTTCACAATCACACAAT | + |
|
Preference number: 5 (lower is better) Translates to: SKEISSWPCHQIHMRSFLSVLTL*VSQSHN Trigger: ATTGTGTGATTGTGAAACCAAGAGCGTTAATACTGA...TAGAAAGGATCTCATATGAATCTGGTGACAAGGCCAGGAAGAGATTTCCTTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR CAA 90 bp | TTGTTTGATGGCAAATCTATGTCAGTATTAACGCTCTTGGTTTCACAATCACACAATCTCTTCCTGGCCTaGTCACCAGATTCATATGAG | + |
|
Preference number: 5 (lower is better) Translates to: LFDGKSMSVLTLLVSQSHNLFLA*SPDSYE Trigger: CTCATATGAATCTGGTGACAAGGCCAGGAAGAGATT...GTGTGATTGTGAAACCAAGAGCGTTAATACTGACATAGATTTGCCATCAAACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR CAA 90 bp | TTGTTTGATGGCAAATCTATGTCAGTATTAACGCTCTTGGTTTCACAATCACACCAGGTGGTGTTTTGTTaGATGGCAAATCTATGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LFDGKSMSVLTLLVSQSHQVVFC*MANLCQ Trigger: CTGACATAGATTTGCCATCAAACAAAACACCACCTG...GTGTGATTGTGAAACCAAGAGCGTTAATACTGACATAGATTTGCCATCAAACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR CAA 90 bp | ATCTCTTCCTGGCCTTGTCACCAGATTCATATGAGATCCTTTCTAGTCTTTTATAAACAAGAAACTACTTaGGGTCCATTCAGCACAATC | + |
|
Preference number: 5 (lower is better) Translates to: ISSWPCHQIHMRSFLVFYKQETT*GPFSTI Trigger: GATTGTGCTGAATGGACCCAAAGTAGTTTCTTGTTT...ATAAAAGACTAGAAAGGATCTCATATGAATCTGGTGACAAGGCCAGGAAGAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR CAA 90 bp | ATCTCTTCCTGGCCTTGTCACCAGATTCATATGAGATCCTTTCTAGTCTTTTATTCAGTATTAACGCTCTaGGTTTCACAATCACACAAT | + |
|
Preference number: 5 (lower is better) Translates to: ISSWPCHQIHMRSFLVFYSVLTL*VSQSHN Trigger: ATTGTGTGATTGTGAAACCAAGAGCGTTAATACTGA...ATAAAAGACTAGAAAGGATCTCATATGAATCTGGTGACAAGGCCAGGAAGAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS-3UTR CAA 90 bp | TTGTTTGATGGCAAATCTATGTCAGTATTAACGCTCTTGGTTTCACAATCACACAAACAAGAAACTACTTaGGGTCCATTCAGCACAATC | + |
|
Preference number: 5 (lower is better) Translates to: LFDGKSMSVLTLLVSQSHKQETT*GPFSTI Trigger: GATTGTGCTGAATGGACCCAAAGTAGTTTCTTGTTT...GTGTGATTGTGAAACCAAGAGCGTTAATACTGACATAGATTTGCCATCAAACAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS CCA 72 bp | CTGATTCGTTCCCAAGGGGCACTAGGGATGAGGGGATaGGCTGTCCTCCATCCATGGTCCAGGGAAGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LIRSQGALGMRG*AVLHPWSREAR Trigger: TCTGGCTTCCCTGGACCATGGATGGAGGACAGCCCATCCCCTCATCCCTAGTGCCCCTTGGGAACGAATCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS CCA 72 bp | GCACTAGGGATGAGGGGATGGGCTGTCCTCCATCCATaGTCCAGGGAAGCCAGAGCACAGGATATCCTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: ALGMRGWAVLHP*SREARAQDILV Trigger: AACCAGGATATCCTGTGCTCTGGCTTCCCTGGACCATGGATGGAGGACAGCCCATCCCCTCATCCCTAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS CCA 72 bp | CTCCAGGCCTTCAAGTCCATCAGCCCAGGTAGAGGTTaGCATGCTTCGATATGGATCCAAAAGAATCCGGAA | + |
|
Preference number: 6 (lower is better) Translates to: LQAFKSISPGRG*HASIWIQKNPE Trigger: TTCCGGATTCTTTTGGATCCATATCGAAGCATGCCAACCTCTACCTGGGCTGATGGACTTGAAGGCCTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000379445.7 ENST00000395322.3 ENST00000620385.1 |
||
| CDS GCA 72 bp | GGCGTTCCTCATCCCTTGCCCATGCTTCCTACACACTaGATCTCGATTCATCTTTTTAAGCCCAGATCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: GVPHPLPMLPTH*ISIHLFKPRSH Trigger: GTGAGATCTGGGCTTAAAAAGATGAATCGAGATGCAGTGTGTAGGAAGCATGGGCAAGGGATGAGGAACGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000514851.1 |
||
| CDS TCA 72 bp | GCATCATTAACGGCCAATACTGCTGCTTCTTTGAGGTaGGCCATGATTTCAGTTCTGCCTCAGCAACTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ASLTANTAASLR*AMISVLPQQLF Trigger: GAAGAGTTGCTGAGGCAGAACTGAAATCATGGCTCACCTCAAAGAAGCAGCAGTATTGGCCGTTAATGATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000379445.7 |
||
| CDS GCA 72 bp | TTTCTTCCATCATCAATCTGCGGAGGTCATGGTGGCTaGACTCTGGAGAGGCTGAGTTATAGCCATATTTTA | + |
|
Preference number: 6 (lower is better) Translates to: FLPSSICGGHGG*TLERLSYSHIL Trigger: TAAAATATGGCTATAACTCAGCCTCTCCAGAGTGCAGCCACCATGACCTCCGCAGATTGATGATGGAAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000379445.7 ENST00000395322.3 |
||
| CDS GCA 72 bp | GTTTTAGTAATTTTCAAAGTGGCGTTCCTCATCCCTTaGCCATGCTTCCTACACACTGCATCTCGATTCATC | + |
|
Preference number: 6 (lower is better) Translates to: VLVIFKVAFLIP*PCFLHTASRFI Trigger: GATGAATCGAGATGCAGTGTGTAGGAAGCATGGGCAAGGGATGAGGAACGCCACTTTGAAAATTACTAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000395322.3 ENST00000514851.1 |
||
| CDS CAA 72 bp | AGTTTTAGTAATTTTCAAAGTGGCGTTCCTCATCCCTaGCCCATGCTTCCTACACACTGCATCTCGATTCAT | + |
|
Preference number: 6 (lower is better) Translates to: SFSNFQSGVPHP*PMLPTHCISIH Trigger: ATGAATCGAGATGCAGTGTGTAGGAAGCATGGGCAAGGGATGAGGAACGCCACTTTGAAAATTACTAAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000395322.3 ENST00000514851.1 |
||