RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CTTNBP2NL (Homo sapiens)

Ensembl gene IDs: ENSG00000143079

Ensembl transcript IDs: ENST00000271277.11, ENST00000441739.1, ENST00000502356.3, ENST00000607039.1

Found 349 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGAGGGGGATAGCCATTATATTCTATGAACCTTGCCAGCTGTACTaGCCTACACAGTTGGAAAGTTTGGAGGCTTTTGTCCGCATAGAC +
Preference number: 1 (lower is better)
Translates to: QRGIAIIFYEPCQLY*PTQLESLEAFVRID
Trigger: GTCTATGCGGACAAAAGCCTCCAAACTTTCCAACTGTGTAGGCCAGTACAGCTGGCAAGGTTCATAGAATATAATGGCTATCCCCCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR TCA 90 bp TTTGCCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGTGTaGGAGGCCTGTTTCACTCATTTATATGACCAGTTGAGTTTTGTG +
Preference number: 1 (lower is better)
Translates to: FATAPTAPSCFTSLV*EACFTHLYDQLSFV
Trigger: CACAAAACTCAACTGGTCATATAAATGAGTGAAACAGGCCTCTCACACAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR TCA 90 bp AGGAGGTCAGGGCTGCTGGATAGATGTTGGCTCAGAGAATGTATGTaGAGACACCAAGGCCTCTCCTGTATGGACACAAAATCATATAAC +
Preference number: 1 (lower is better)
Translates to: RRSGLLDRCWLRECM*RHQGLSCMDTKSYN
Trigger: GTTATATGATTTTGTGTCCATACAGGAGAGGCCTTGGTGTCTTCACATACATTCTCTGAGCCAACATCTATCCAGCAGCCCTGACCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR GCA 90 bp AGTCTTATTTGGCAGAGGGGGATAGCCATTATATTCTATGAACCTTaGCAGCTGTACTGGCCTACACAGTTGGAAAGTTTGGAGGCTTTT +
Preference number: 1 (lower is better)
Translates to: SLIWQRGIAIIFYEP*QLYWPTQLESLEAF
Trigger: AAAAGCCTCCAAACTTTCCAACTGTGTAGGCCAGTACAGCTGGCAAGGTTCATAGAATATAATGGCTATCCCCCTCTGCCAAATAAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR TCA 90 bp AATCAATGTCTTAGTTCCTTATGGAGTCTAACCTGGATGGGTCATTaGCTTCATTTGTTTTGTCAAAGCCACAGTCAAGTGCTCCCTCTA +
Preference number: 1 (lower is better)
Translates to: NQCLSSLWSLTWMGH*LHLFCQSHSQVLPL
Trigger: TAGAGGGAGCACTTGACTGTGGCTTTGACAAAACAAATGAAGTCAATGACCCATCCAGGTTAGACTCCATAAGGAACTAAGACATTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR GCA 90 bp TTATCAACACTATTCGTTTTGGCTCTGCATAGGAATAAAGTTCAATaGATGATTGCCTTGGACAGTTTAAGATACCCCCTACATCATTTT +
Preference number: 1 (lower is better)
Translates to: LSTLFVLALHRNKVQ*MIALDSLRYPLHHF
Trigger: AAAATGATGTAGGGGGTATCTTAAACTGTCCAAGGCAATCATGCATTGAACTTTATTCCTATGCAGAGCCAAAACGAATAGTGTTGATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR-3UTR GCA 90 bp TCATTTGTTTTGTCAAAGCCACAGTCAAGTGCTCCCTCTACACCACCCCCTCTTAATCAGCACCCCAACTaGTTAGTGCTCAGGAGGGTT +
Preference number: 2 (lower is better)
Translates to: SFVLSKPQSSAPSTPPPLNQHPN*LVLRRV
Trigger: AACCCTCCTGAGCACTAAGCAGTTGGGGTGCTGATT...AAGAGGGGGTGGTGTAGAGGGAGCACTTGACTGTGGCTTTGACAAAACAAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR-3UTR GCA 90 bp CAGCAAGCAGATGGAGCTGAACAGATGCCCTTTTTAAATGCGGCTTGGGCACTTGTGCCTGGCCAGCTCTaGCTTTTTATGATACTGAAG +
Preference number: 2 (lower is better)
Translates to: QQADGAEQMPFLNAAWALVPGQL*LFMILK
Trigger: CTTCAGTATCATAAAAAGGCAGAGCTGGCCAGGCAC...AAGTGCCCAAGCCGCATTTAAAAAGGGCATCTGTTCAGCTCCATCTGCTTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR-3UTR TCA 90 bp ACTTTAGTTTGCCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGTGTGACTCAGAAGTCTGACTaGGCTTTTGGACGAAATCTG +
Preference number: 2 (lower is better)
Translates to: TLVCHSSHCSQLFYIACVTQKSD*AFGRNL
Trigger: CAGATTTCGTCCAAAAGCTCAGTCAGACTTCTGAGT...CACACAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR-3UTR TCA 90 bp CAGCAAGCAGATGGAGCTGAACAGATGCCCTTTTTAAATGCGGCTTGGGCACTTCAAATCACCACCTGGTaGTTCGCTTTCTTCATCACA +
Preference number: 2 (lower is better)
Translates to: QQADGAEQMPFLNAAWALQITTW*FAFFIT
Trigger: TGTGATGAAGAAAGCGAATCACCAGGTGGTGATTTG...AAGTGCCCAAGCCGCATTTAAAAAGGGCATCTGTTCAGCTCCATCTGCTTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR CAA 90 bp TTCCTTATGGAGTCTAACCTGGATGGGTCATTGACTTCATTTGTTTaGTCAAAGCCACAGTCAAGTGCTCCCTCTACACCACCCCCTCTT +
Preference number: 2 (lower is better)
Translates to: FLMESNLDGSLTSFV*SKPQSSAPSTPPPL
Trigger: AAGAGGGGGTGGTGTAGAGGGAGCACTTGACTGTGGCTTTGACAAAACAAATGAAGTCAATGACCCATCCAGGTTAGACTCCATAAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR-3UTR GCA 90 bp ACTTTAGTTTGCCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGTGTGGAGACATCTTTGAGGTaGCTTTCTGGCTTCAGTAAA +
Preference number: 2 (lower is better)
Translates to: TLVCHSSHCSQLFYIACVETSLR*LSGFSK
Trigger: TTTACTGAAGCCAGAAAGGCACCTCAAAGATGTCTC...CACACAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR-3UTR CCA 90 bp ACTTTAGTTTGCCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGTGTGGATCTAGGCTTCATTTaGAATTTCCTCACCTTCCTG +
Preference number: 2 (lower is better)
Translates to: TLVCHSSHCSQLFYIACVDLGFI*NFLTFL
Trigger: CAGGAAGGTGAGGAAATTCCAAATGAAGCCTAGATC...CACACAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR-3UTR CCA 90 bp GGAGTTGCCAATATACTCCATTGTGATTTATACACTGATTTCCATCACCTGCCTGGAGGTCAGGGCTGCTaGATAGATGTTGGCTCAGAG +
Preference number: 2 (lower is better)
Translates to: GVANILHCDLYTDFHHLPGGQGC*IDVGSE
Trigger: CTCTGAGCCAACATCTATCCAGCAGCCCTGACCTCC...AGGCAGGTGATGGAAATCAGTGTATAAATCACAATGGAGTATATTGGCAACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR-3UTR TCA 90 bp ACACATACACACACACACACACAAATTGACAAGGCAGCACTGCTGACAGGCTATTCTGACTCAGAAGTCTaGCTGAGCTTTTGGACGAAA +
Preference number: 2 (lower is better)
Translates to: THTHTHTQIDKAALLTGYSDSEV*LSFWTK
Trigger: TTTCGTCCAAAAGCTCAGTCAGACTTCTGAGTCAGA...ATAGCCTGTCAGCAGTGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR-3UTR CCA 90 bp ACTTTAGTTTGCCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGTGTGCAGGTTCTGGCAGCTTaGAGAATAAGTGTAACAATT +
Preference number: 2 (lower is better)
Translates to: TLVCHSSHCSQLFYIACVQVLAA*RISVTI
Trigger: AATTGTTACACTTATTCTCCAAGCTGCCAGAACCTG...CACACAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR-3UTR TCA 90 bp ACACATACACACACACACACACAAATTGACAAGGCAGCACTGCTGACAGGCTATCAGAAGTTTCTAGAATaGAAGAGGTTGCAACTTGGC +
Preference number: 2 (lower is better)
Translates to: THTHTHTQIDKAALLTGYQKFLE*KRLQLG
Trigger: GCCAAGTTGCAACCTCTTTCATTCTAGAAACTTCTG...ATAGCCTGTCAGCAGTGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR-3UTR TCA 90 bp ACACATACACACACACACACACAAATTGACAAGGCAGCACTGCTGACAGGCTATAGCCATTATATTCTATaGACCTTGCCAGCTGTACTG +
Preference number: 2 (lower is better)
Translates to: THTHTHTQIDKAALLTGYSHYIL*TLPAVL
Trigger: CAGTACAGCTGGCAAGGTTCATAGAATATAATGGCT...ATAGCCTGTCAGCAGTGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR CAA 90 bp CTTCATTTGGAATTTCCTCACCTTCCTGTGGACAAAATTCCTCCTTaGATTGTGTCCCAGCCACATCTAGTTGCTTCGGTAGGTAATCTT +
Preference number: 2 (lower is better)
Translates to: LHLEFPHLPVDKIPP*IVSQPHLVASVGNL
Trigger: AAGATTACCTACCGAAGCAACTAGATGTGGCTGGGACACAATCAAAGGAGGAATTTTGTCCACAGGAAGGTGAGGAAATTCCAAATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR-3UTR TCA 90 bp CCATTTAAAGCAAAAGAGACAATAACTCTCTGGCACTGTAGCCTCCTCTCCAGTCTTTTGGACGAAATCTaGTGGAATGTCAAACGTGGA +
Preference number: 2 (lower is better)
Translates to: PFKAKETITLWHCSLLSSLLDEI*WNVKRG
Trigger: TCCACGTTTGACATTCCATCAGATTTCGTCCAAAAG...ACTGGAGAGGAGGCTACAGTGCCAGAGAGTTATTGTCTCTTTTGCTTTAAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR-3UTR TCA 90 bp ACACATACACACACACACACACAAATTGACAAGGCAGCACTGCTGACAGGCTATACCTGGATGGGTCATTaGCTTCATTTGTTTTGTCAA +
Preference number: 2 (lower is better)
Translates to: THTHTHTQIDKAALLTGYTWMGH*LHLFCQ
Trigger: TTGACAAAACAAATGAAGTCAATGACCCATCCAGGT...ATAGCCTGTCAGCAGTGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR-3UTR GCA 90 bp ACTTTAGTTTGCCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGTGTGTCTGGAATAAAAATCTaGATGAACCACTTCTGCATA +
Preference number: 2 (lower is better)
Translates to: TLVCHSSHCSQLFYIACVSGIKI*MNHFCI
Trigger: TATGCAGAAGTGGTTCATGCAGATTTTTATTCCAGA...CACACAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR-3UTR GCA 90 bp TCATTTGTTTTGTCAAAGCCACAGTCAAGTGCTCCCTCTACACCACCCCCTCTTCTGATTTCCATCACCTaGCTTTTTACTATCAACTCT +
Preference number: 2 (lower is better)
Translates to: SFVLSKPQSSAPSTPPPLLISIT*LFTINS
Trigger: AGAGTTGATAGTAAAAAGGCAGGTGATGGAAATCAG...AAGAGGGGGTGGTGTAGAGGGAGCACTTGACTGTGGCTTTGACAAAACAAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR-3UTR CCA 90 bp AATTCACACACACACACACATACACACACACACACACAAATTGACAAGGCAGCAGTGGATAGTCTTATTTaGCAGAGGGGGATAGCCATT +
Preference number: 2 (lower is better)
Translates to: NSHTHTHTHTHTQIDKAAVDSLI*QRGIAI
Trigger: AATGGCTATCCCCCTCTGCCAAATAAGACTATCCAC...TGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR-3UTR GCA 90 bp AATTCACACACACACACACATACACACACACACACACAAATTGACAAGGCAGCACTGTTCAAGAACTTATaGAGGAAACTGGGAGTGACT +
Preference number: 2 (lower is better)
Translates to: NSHTHTHTHTHTQIDKAALFKNL*RKLGVT
Trigger: AGTCACTCCCAGTTTCCTGCATAAGTTCTTGAACAG...TGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR-3UTR GCA 90 bp AATTCACACACACACACACATACACACACACACACACAAATTGACAAGGCAGCACAAGCTAAATCCAGCTaGAGACGTGTTTGTTTAACC +
Preference number: 2 (lower is better)
Translates to: NSHTHTHTHTHTQIDKAAQAKSS*RRVCLT
Trigger: GGTTAAACAAACACGTCTGCAGCTGGATTTAGCTTG...TGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR-3UTR GCA 90 bp CCACATCTAGTTGCTTCGGTAGGTAATCTTAATGTGCAGTTCTACTTGTCCTTTTTCCCATTCTACTTATaGAGCCTTGTTTCAGAACAC +
Preference number: 2 (lower is better)
Translates to: PHLVASVGNLNVQFYLSFFPFYL*SLVSEH
Trigger: GTGTTCTGAAACAAGGCTGCATAAGTAGAATGGGAA...AAAGGACAAGTAGAACTGCACATTAAGATTACCTACCGAAGCAACTAGATGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR-3UTR TCA 90 bp CCACATCTAGTTGCTTCGGTAGGTAATCTTAATGTGCAGTTCTACTTGTCCTTTGCAGGAAACTGGGAGTaGCTTAATTTTTCAAAAGTA +
Preference number: 2 (lower is better)
Translates to: PHLVASVGNLNVQFYLSFAGNWE*LNFSKV
Trigger: TACTTTTGAAAAATTAAGTCACTCCCAGTTTCCTGC...AAAGGACAAGTAGAACTGCACATTAAGATTACCTACCGAAGCAACTAGATGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR-3UTR GCA 90 bp CCACATCTAGTTGCTTCGGTAGGTAATCTTAATGTGCAGTTCTACTTGTCCTTTTGCATGAACCACTTCTaGATAATTCAAAATGAGTGT +
Preference number: 2 (lower is better)
Translates to: PHLVASVGNLNVQFYLSFCMNHF*IIQNEC
Trigger: ACACTCATTTTGAATTATGCAGAAGTGGTTCATGCA...AAAGGACAAGTAGAACTGCACATTAAGATTACCTACCGAAGCAACTAGATGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR CAA 90 bp CTCTCCAGTTTAGAAAGTTTAGCTATTTTATCAACACTATTCGTTTaGGCTCTGCATAGGAATAAAGTTCAATGCATGATTGCCTTGGAC +
Preference number: 2 (lower is better)
Translates to: LSSLESLAILSTLFV*ALHRNKVQCMIALD
Trigger: GTCCAAGGCAATCATGCATTGAACTTTATTCCTATGCAGAGCCAAAACGAATAGTGTTGATAAAATAGCTAAACTTTCTAAACTGGAGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR-3UTR CAA 90 bp ACCTTGCCAGCTGTACTGGCCTACACAGTTGGAAAGTTTGGAGGCTTTTGTCCGCTTGGGCACTTTAGTTaGCCACAGCTCCCACTGCTC +
Preference number: 3 (lower is better)
Translates to: TLPAVLAYTVGKFGGFCPLGHFS*PQLPLL
Trigger: GAGCAGTGGGAGCTGTGGCAAACTAAAGTGCCCAAG...CGGACAAAAGCCTCCAAACTTTCCAACTGTGTAGGCCAGTACAGCTGGCAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR-3UTR CAA 90 bp CAGCAAGCAGATGGAGCTGAACAGATGCCCTTTTTAAATGCGGCTTGGGCACTTTTGATGAGGCTGGTCTaGAACACCTGGTCTCAAGAG +
Preference number: 3 (lower is better)
Translates to: QQADGAEQMPFLNAAWALLMRLV*NTWSQE
Trigger: CTCTTGAGACCAGGTGTTCAAGACCAGCCTCATCAA...AAGTGCCCAAGCCGCATTTAAAAAGGGCATCTGTTCAGCTCCATCTGCTTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR TCA 72 bp GCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGTGTaGGAGGCCTGTTTCACTCATTTATATGACCAGTTG +
Preference number: 3 (lower is better)
Translates to: APTAPSCFTSLV*EACFTHLYDQL
Trigger: CAACTGGTCATATAAATGAGTGAAACAGGCCTCTCACACAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR TCA 72 bp GGGCTGCTGGATAGATGTTGGCTCAGAGAATGTATGTaGAGACACCAAGGCCTCTCCTGTATGGACACAAAA +
Preference number: 3 (lower is better)
Translates to: GLLDRCWLRECM*RHQGLSCMDTK
Trigger: TTTTGTGTCCATACAGGAGAGGCCTTGGTGTCTTCACATACATTCTCTGAGCCAACATCTATCCAGCAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR-3UTR CAA 90 bp ACTTTAGTTTGCCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGTGTGCCAGGTTCTGGCAGCTaGGAGAATAAGTGTAACAAT +
Preference number: 3 (lower is better)
Translates to: TLVCHSSHCSQLFYIACVPGSGS*ENKCNN
Trigger: ATTGTTACACTTATTCTCCAAGCTGCCAGAACCTGG...CACACAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR-3UTR CAA 90 bp CAGCAAGCAGATGGAGCTGAACAGATGCCCTTTTTAAATGCGGCTTGGGCACTTAGATCTAGGCTTCATTaGGAATTTCCTCACCTTCCT +
Preference number: 3 (lower is better)
Translates to: QQADGAEQMPFLNAAWALRSRLH*EFPHLP
Trigger: AGGAAGGTGAGGAAATTCCAAATGAAGCCTAGATCT...AAGTGCCCAAGCCGCATTTAAAAAGGGCATCTGTTCAGCTCCATCTGCTTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR GCA 72 bp TGGCAGAGGGGGATAGCCATTATATTCTATGAACCTTaGCAGCTGTACTGGCCTACACAGTTGGAAAGTTTG +
Preference number: 3 (lower is better)
Translates to: WQRGIAIIFYEP*QLYWPTQLESL
Trigger: CAAACTTTCCAACTGTGTAGGCCAGTACAGCTGGCAAGGTTCATAGAATATAATGGCTATCCCCCTCTGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR-3UTR CAA 90 bp AATTCACACACACACACACATACACACACACACACACAAATTGACAAGGCAGCAGAGCTTGAGACATCTTaGAGGTGCCTTTCTGGCTTC +
Preference number: 3 (lower is better)
Translates to: NSHTHTHTHTHTQIDKAAELETS*RCLSGF
Trigger: GAAGCCAGAAAGGCACCTCAAAGATGTCTCAAGCTC...TGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR TCA 72 bp TCTTATTTGGCAGAGGGGGATAGCCATTATATTCTATaGACCTTGCCAGCTGTACTGGCCTACACAGTTGGA +
Preference number: 3 (lower is better)
Translates to: SYLAEGDSHYIL*TLPAVLAYTVG
Trigger: TCCAACTGTGTAGGCCAGTACAGCTGGCAAGGTTCATAGAATATAATGGCTATCCCCCTCTGCCAAATAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR CCA 72 bp CCACTGTGTCTGAGCTGGGTTGTGGATAGTCTTATTTaGCAGAGGGGGATAGCCATTATATTCTATGAACCT +
Preference number: 3 (lower is better)
Translates to: PLCLSWVVDSLI*QRGIAIIFYEP
Trigger: AGGTTCATAGAATATAATGGCTATCCCCCTCTGCCAAATAAGACTATCCACAACCCAGCTCAGACACAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR-3UTR CAA 90 bp AATTCACACACACACACACATACACACACACACACACAAATTGACAAGGCAGCAGACAAAATTCCTCCTTaGATTGTGTCCCAGCCACAT +
Preference number: 3 (lower is better)
Translates to: NSHTHTHTHTHTQIDKAADKIPP*IVSQPH
Trigger: ATGTGGCTGGGACACAATCAAAGGAGGAATTTTGTC...TGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR-3UTR CAA 90 bp TCATTTGTTTTGTCAAAGCCACAGTCAAGTGCTCCCTCTACACCACCCCCTCTTGGATCCATTGCAAGATaGTGCTTATTTATCTCAGAA +
Preference number: 3 (lower is better)
Translates to: SFVLSKPQSSAPSTPPPLGSIAR*CLFISE
Trigger: TTCTGAGATAAATAAGCACAATCTTGCAATGGATCC...AAGAGGGGGTGGTGTAGAGGGAGCACTTGACTGTGGCTTTGACAAAACAAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR CCA 72 bp ATAGCCATTATATTCTATGAACCTTGCCAGCTGTACTaGCCTACACAGTTGGAAAGTTTGGAGGCTTTTGTC +
Preference number: 3 (lower is better)
Translates to: IAIIFYEPCQLY*PTQLESLEAFV
Trigger: GACAAAAGCCTCCAAACTTTCCAACTGTGTAGGCCAGTACAGCTGGCAAGGTTCATAGAATATAATGGCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR-3UTR CAA 90 bp AATTCACACACACACACACATACACACACACACACACAAATTGACAAGGCAGCACATTTATATGACCAGTaGAGTTTTGTGACACTGGGG +
Preference number: 3 (lower is better)
Translates to: NSHTHTHTHTHTQIDKAAHLYDQ*SFVTLG
Trigger: CCCCAGTGTCACAAAACTCAACTGGTCATATAAATG...TGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR-3UTR CAA 90 bp GGAGTTGCCAATATACTCCATTGTGATTTATACACTGATTTCCATCACCTGCCTTACTGGCCTACACAGTaGGAAAGTTTGGAGGCTTTT +
Preference number: 3 (lower is better)
Translates to: GVANILHCDLYTDFHHLPYWPTQ*ESLEAF
Trigger: AAAAGCCTCCAAACTTTCCAACTGTGTAGGCCAGTA...AGGCAGGTGATGGAAATCAGTGTATAAATCACAATGGAGTATATTGGCAACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR TCA 72 bp TCCATTTCAAGGACTAAGCATCAGAAGCACTCCTTATaGATTCACACACACACACACATACACACACACACA +
Preference number: 3 (lower is better)
Translates to: SISRTKHQKHSL*IHTHTHIHTHT
Trigger: TGTGTGTGTGTGTATGTGTGTGTGTGTGTGAATTCATAAGGAGTGCTTCTGATGCTTAGTCCTTGAAATGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR-3UTR CAA 90 bp AATTCACACACACACACACATACACACACACACACACAAATTGACAAGGCAGCATCTACTTATGCAGCCTaGTTTCAGAACACAAAGCTT +
Preference number: 3 (lower is better)
Translates to: NSHTHTHTHTHTQIDKAASTYAA*FQNTKL
Trigger: AAGCTTTGTGTTCTGAAACAAGGCTGCATAAGTAGA...TGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR-3UTR CAA 90 bp GTTCCATTTCAAGGACTAAGCATCAGAAGCACTCCTTATGAATTCACACACACACATCATTACAATCTGTaGGCCAGTAACAGCTTTTGC +
Preference number: 3 (lower is better)
Translates to: VPFQGLSIRSTPYEFTHTHHYNL*ASNSFC
Trigger: GCAAAAGCTGTTACTGGCCAACAGATTGTAATGATG...TGTGTGTGTGAATTCATAAGGAGTGCTTCTGATGCTTAGTCCTTGAAATGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR GCA 72 bp CTATTCGTTTTGGCTCTGCATAGGAATAAAGTTCAATaGATGATTGCCTTGGACAGTTTAAGATACCCCCTA +
Preference number: 3 (lower is better)
Translates to: LFVLALHRNKVQ*MIALDSLRYPL
Trigger: TAGGGGGTATCTTAAACTGTCCAAGGCAATCATGCATTGAACTTTATTCCTATGCAGAGCCAAAACGAATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR-3UTR CAA 90 bp GGAGTTGCCAATATACTCCATTGTGATTTATACACTGATTTCCATCACCTGCCTAATGTGCAGTTCTACTaGTCCTTTATGCTATATTGC +
Preference number: 3 (lower is better)
Translates to: GVANILHCDLYTDFHHLPNVQFY*SFMLYC
Trigger: GCAATATAGCATAAAGGACAAGTAGAACTGCACATT...AGGCAGGTGATGGAAATCAGTGTATAAATCACAATGGAGTATATTGGCAACTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR-3UTR CAA 90 bp CTCCAGTTTAGAAAGTTTAGCTATTTTATCAACACTATTCGTTTTGGCTCTGCAGAAAGAGGTTGCAACTaGGCAGCTTGCAAGCTAAAT +
Preference number: 3 (lower is better)
Translates to: LQFRKFSYFINTIRFGSAERGCN*AACKLN
Trigger: ATTTAGCTTGCAAGCTGCCAAGTTGCAACCTCTTTC...TGCAGAGCCAAAACGAATAGTGTTGATAAAATAGCTAAACTTTCTAAACTGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR TCA 72 bp ACATCCTATTTTGAAGCCAGTGTTTTGAAAGACAGTTaGAGTTCCATTTCAAGGACTAAGCATCAGAAGCAC +
Preference number: 3 (lower is better)
Translates to: TSYFEASVLKDS*SSISRTKHQKH
Trigger: GTGCTTCTGATGCTTAGTCCTTGAAATGGAACTTCAACTGTCTTTCAAAACACTGGCTTCAAAATAGGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR TCA 72 bp TCTTTGAGGTGCCTTTCTGGCTTCAGTAAAAAGATGTaGGCCATAAAAATCCAAACTACTCAGTTTCTACTT +
Preference number: 3 (lower is better)
Translates to: SLRCLSGFSKKM*AIKIQTTQFLL
Trigger: AAGTAGAAACTGAGTAGTTTGGATTTTTATGGCTCACATCTTTTTACTGAAGCCAGAAAGGCACCTCAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR CCA 72 bp AGATTACCATTTAAAGCAAAAGAGACAATAACTCTCTaGCACTGTAGCCTCCTCTCCAGTTTAGAAAGTTTA +
Preference number: 3 (lower is better)
Translates to: RLPFKAKETITL*HCSLLSSLESL
Trigger: TAAACTTTCTAAACTGGAGAGGAGGCTACAGTGCCAGAGAGTTATTGTCTCTTTTGCTTTAAATGGTAATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR CCA 72 bp TGCTTGTGTTATATGGTACACATCATTACAATCTGTTaGCCAGTAACAGCTTTTGCAACATGGGTTAATACT +
Preference number: 3 (lower is better)
Translates to: CLCYMVHIITIC*PVTAFATWVNT
Trigger: AGTATTAACCCATGTTGCAAAAGCTGTTACTGGCCAACAGATTGTAATGATGTGTACCATATAACACAAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp ACTTTAGTTTGCCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGTGTGTCAGCAGCAGCCAGCTaGGACAGCATGCGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: TLVCHSSHCSQLFYIACVSAAAS*DSMRSC
Trigger: GCAGGAGCGCATGCTGTCCCAGCTGGCTGCTGCTGA...CACACAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp ACCTTGCCAGCTGTACTGGCCTACACAGTTGGAAAGTTTGGAGGCTTTTGTCCGAGGATCACCTTTCGGTaGCTGCTCTCAGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: TLPAVLAYTVGKFGGFCPRITFR*LLSAAA
Trigger: GGCTGCTGCTGAGAGCAGGCACCGAAAGGTGATCCT...CGGACAAAAGCCTCCAAACTTTCCAACTGTGTAGGCCAGTACAGCTGGCAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR TCA 90 bp CAGCAAGCAGATGGAGCTGAACAGATGCCCTTTTTAAATGCGGCTTGGGCACTTTGGAGAGCACCTGAGTaGCTGTGTTTCGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: QQADGAEQMPFLNAAWALWRAPE*LCFGPA
Trigger: AGCTGGCCCGAAACACAGTCACTCAGGTGCTCTCCA...AAGTGCCCAAGCCGCATTTAAAAAGGGCATCTGTTCAGCTCCATCTGCTTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp GGGCACTTTAGTTTGCCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGTCCTGTGCATGCCGCTaGCTTTCTTCCTCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: GHFSLPQLPLLPAVLHRLSCACR*LSSSRS
Trigger: AGACCTTGAGGAAGAAAGGCAGCGGCATGCACAGGA...CAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp ACTTTAGTTTGCCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGTGTGGTGTTTCGGGCCAGCTaGTTGGCGGCAGAGTTGTCT +
Preference number: 4 (lower is better)
Translates to: TLVCHSSHCSQLFYIACVVFRAS*LAAELS
Trigger: AGACAACTCTGCCGCCAAGCAGCTGGCCCGAAACAC...CACACAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp GGGCACTTTAGTTTGCCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGTTGTGGCGAGCTGCATaGAACCGTTGGTTGATCCCT +
Preference number: 4 (lower is better)
Translates to: GHFSLPQLPLLPAVLHRLLWRAA*NRWLIP
Trigger: AGGGATCAACCAACGGTTCCATGCAGCTCGCCACAA...CAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp ACCTTGCCAGCTGTACTGGCCTACACAGTTGGAAAGTTTGGAGGCTTTTGTCCGGGCTCTGTAGGCCACTaGCTTGTTGGTCCTGATCTG +
Preference number: 4 (lower is better)
Translates to: TLPAVLAYTVGKFGGFCPGSVGH*LVGPDL
Trigger: CAGATCAGGACCAACAAGCCAGTGGCCTACAGAGCC...CGGACAAAAGCCTCCAAACTTTCCAACTGTGTAGGCCAGTACAGCTGGCAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR TCA 90 bp ACTTTAGTTTGCCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGTGTGCGGCAGAGTTGTCTATaGGGGTGGGGGATAAATCCC +
Preference number: 4 (lower is better)
Translates to: TLVCHSSHCSQLFYIACVRQSCL*GWGINP
Trigger: GGGATTTATCCCCCACCCTCATAGACAACTCTGCCG...CACACAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR TCA 90 bp ACTTTAGTTTGCCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGTGTGAATCTGGAGAGCACCTaGGTGACTGTGTTTCGGGCC +
Preference number: 4 (lower is better)
Translates to: TLVCHSSHCSQLFYIACVNLEST*VTVFRA
Trigger: GGCCCGAAACACAGTCACTCAGGTGCTCTCCAGATT...CACACAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR TCA 90 bp GGGCACTTTAGTTTGCCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGACAAGGCAGCACTGCTaGCAGGCTATTAAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: GHFSLPQLPLLPAVLHRLTRQHC*QAIKGN
Trigger: GTTTCCCTTAATAGCCTGTCAGCAGTGCTGCCTTGT...CAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR TCA 90 bp GGGCACTTTAGTTTGCCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGCACACACACACAAATTaGCAAGGCAGCACTGCTGAC +
Preference number: 4 (lower is better)
Translates to: GHFSLPQLPLLPAVLHRLHTHTN*QGSTAD
Trigger: GTCAGCAGTGCTGCCTTGTCAATTTGTGTGTGTGTG...CAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp ACCTTGCCAGCTGTACTGGCCTACACAGTTGGAAAGTTTGGAGGCTTTTGTCCGCATGAGAGGCTCAGTTaGTGTGCCTTTGGACACGGT +
Preference number: 4 (lower is better)
Translates to: TLPAVLAYTVGKFGGFCPHERLS*CAFGHG
Trigger: ACCGTGTCCAAAGGCACAGCAACTGAGCCTCTCATG...CGGACAAAAGCCTCCAAACTTTCCAACTGTGTAGGCCAGTACAGCTGGCAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp GGGCACTTTAGTTTGCCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGGGTTTTCTACATTGTTaGCTGCAGTCAGCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: GHFSLPQLPLLPAVLHRLGFLHC*LQSAPW
Trigger: CCAGGGAGCTGACTGCAGGCAACAATGTAGAAAACC...CAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp CAGCAAGCAGATGGAGCTGAACAGATGCCCTTTTTAAATGCGGCTTGGGCACTTGCAGGAGGTCAGGGCTaGTGGATAGATGTTGGCTCA +
Preference number: 4 (lower is better)
Translates to: QQADGAEQMPFLNAAWALAGGQG*WIDVGS
Trigger: TGAGCCAACATCTATCCAGCAGCCCTGACCTCCTGC...AAGTGCCCAAGCCGCATTTAAAAAGGGCATCTGTTCAGCTCCATCTGCTTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp CAGCAAGCAGATGGAGCTGAACAGATGCCCTTTTTAAATGCGGCTTGGGCACTTTGGAAGAGAGGGGACTaGGCATTGGGACTGGAGTCT +
Preference number: 4 (lower is better)
Translates to: QQADGAEQMPFLNAAWALWKRGD*ALGLES
Trigger: AGACTCCAGTCCCAATGCCCAGTCCCCTCTCTTCCA...AAGTGCCCAAGCCGCATTTAAAAAGGGCATCTGTTCAGCTCCATCTGCTTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp ACCTTGCCAGCTGTACTGGCCTACACAGTTGGAAAGTTTGGAGGCTTTTGTCCGGCTGTTGGGAGAGACTaGCTTGATTGGCCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: TLPAVLAYTVGKFGGFCPAVGRD*LDWPLL
Trigger: CAACAAGGGCCAATCAAGCCAGTCTCTCCCAACAGC...CGGACAAAAGCCTCCAAACTTTCCAACTGTGTAGGCCAGTACAGCTGGCAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR TCA 90 bp ACTTTAGTTTGCCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGTGTGGAGGCTGCCTGGGAATaGGTTTTGGTCAATGGAGTG +
Preference number: 4 (lower is better)
Translates to: TLVCHSSHCSQLFYIACVEAAWE*VLVNGV
Trigger: CACTCCATTGACCAAAACTCATTCCCAGGCAGCCTC...CACACAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp CAGCAAGCAGATGGAGCTGAACAGATGCCCTTTTTAAATGCGGCTTGGGCACTTCTGTCCTTCCTCGGCTaGCTTGTTGGTGGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: QQADGAEQMPFLNAAWALLSFLG*LVGGFL
Trigger: AAGAAAGCCACCAACAAGGCAGCCGAGGAAGGACAG...AAGTGCCCAAGCCGCATTTAAAAAGGGCATCTGTTCAGCTCCATCTGCTTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp CCATTTAAAGCAAAAGAGACAATAACTCTCTGGCACTGTAGCCTCCTCTCCAGTAGGAGGCAGTGCTGCTaGGAGACAGTGAGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: PFKAKETITLWHCSLLSSRRQCC*ETVSSH
Trigger: GTGGGAGCTCACTGTCTCCCAGCAGCACTGCCTCCT...ACTGGAGAGGAGGCTACAGTGCCAGAGAGTTATTGTCTCTTTTGCTTTAAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp TCATTTGTTTTGTCAAAGCCACAGTCAAGTGCTCCCTCTACACCACCCCCTCTTTGGGGGATAAATCCCTaGATGGAGGGCTCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: SFVLSKPQSSAPSTPPPLWGINP*MEGSVG
Trigger: GCCTACAGAGCCCTCCATCCAGGGATTTATCCCCCA...AAGAGGGGGTGGTGTAGAGGGAGCACTTGACTGTGGCTTTGACAAAACAAATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR TCA 90 bp CCATTTAAAGCAAAAGAGACAATAACTCTCTGGCACTGTAGCCTCCTCTCCAGTCCCTACTTGGTACGATaGCTGGTAGCCAGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: PFKAKETITLWHCSLLSSPYLVR*LVARAA
Trigger: AGCAGCCCTGGCTACCAGTCATCGTACCAAGTAGGG...ACTGGAGAGGAGGCTACAGTGCCAGAGAGTTATTGTCTCTTTTGCTTTAAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR TCA 90 bp GGGCACTTTAGTTTGCCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGTTAAGCAGAAATACATaGGCCATGGATGGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: GHFSLPQLPLLPAVLHRLLSRNT*AMDGFR
Trigger: CCTGAAGCCATCCATGGCTCATGTATTTCTGCTTAA...CAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp ACACATACACACACACACACACAAATTGACAAGGCAGCACTGCTGACAGGCTATGCCGTATCCTGTGCATaGCGCTGCCTTTCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: THTHTHTQIDKAALLTGYAVSCA*RCLSSS
Trigger: TGAGGAAGAAAGGCAGCGGCATGCACAGGATACGGC...ATAGCCTGTCAGCAGTGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp AATTCACACACACACACACATACACACACACACACACAAATTGACAAGGCAGCAAGCATGGATGAGAGCTaGTTGTGGCGGGAGCGCTCC +
Preference number: 4 (lower is better)
Translates to: NSHTHTHTHTHTQIDKAASMDES*LWRERS
Trigger: GGAGCGCTCCCGCCACAAGCAGCTCTCATCCATGCT...TGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp GGGCACTTTAGTTTGCCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGTCAAACTCTGATAACTaGTTCTCTACCTGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: GHFSLPQLPLLPAVLHRLSNSDN*FSTWAS
Trigger: TGAGGCCCAGGTAGAGAAGCAGTTATCAGAGTTTGA...CAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp TCATTTGTTTTGTCAAAGCCACAGTCAAGTGCTCCCTCTACACCACCCCCTCTTTCATTAGGGCTACTGTaGTGGTGGGAAGCCTCTAGG +
Preference number: 4 (lower is better)
Translates to: SFVLSKPQSSAPSTPPPLSLGLL*WWEASR
Trigger: CCTAGAGGCTTCCCACCAGCACAGTAGCCCTAATGA...AAGAGGGGGTGGTGTAGAGGGAGCACTTGACTGTGGCTTTGACAAAACAAATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp GGGCACTTTAGTTTGCCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGCCCATGGGTTCTTTCTaGTGGAAAACTCTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: GHFSLPQLPLLPAVLHRLPMGSF*WKTLCL
Trigger: CAAACAGAGAGTTTTCCAGCAGAAAGAACCCATGGG...CAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp ACCTTGCCAGCTGTACTGGCCTACACAGTTGGAAAGTTTGGAGGCTTTTGTCCGAGTGGTCAAAGAGGCTaGCTGGGAATGAGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: TLPAVLAYTVGKFGGFCPSGQRG*LGMSFG
Trigger: ACCAAAACTCATTCCCAGGCAGCCTCTTTGACCACT...CGGACAAAAGCCTCCAAACTTTCCAACTGTGTAGGCCAGTACAGCTGGCAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp ACTTTAGTTTGCCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGTGTGAATCAGCACCCCAACTaGTTAGTGCTCAGGAGGGTT +
Preference number: 4 (lower is better)
Translates to: TLVCHSSHCSQLFYIACVNQHPN*LVLRRV
Trigger: AACCCTCCTGAGCACTAAGCAGTTGGGGTGCTGATT...CACACAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp CAGCAAGCAGATGGAGCTGAACAGATGCCCTTTTTAAATGCGGCTTGGGCACTTACTCAAGCACTAGCATaGATGAGAGCTGCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: QQADGAEQMPFLNAAWALTQALA*MRAACG
Trigger: GCCACAAGCAGCTCTCATCCATGCTAGTGCTTGAGT...AAGTGCCCAAGCCGCATTTAAAAAGGGCATCTGTTCAGCTCCATCTGCTTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp AACTGCTTAGTGCTCAGGAGGGTTTCTCAAGGGCTCTATAAAGCTCAGCTTGTGCGGCTGCCTTGTTGGTaGCTTTCTTGCACTCAAGCA +
Preference number: 4 (lower is better)
Translates to: NCLVLRRVSQGLYKAQLVRLPCW*LSCTQA
Trigger: TGCTTGAGTGCAAGAAAGCCACCAACAAGGCAGCCG...CACAAGCTGAGCTTTATAGAGCCCTTGAGAAACCCTCCTGAGCACTAAGCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp CCATTTAAAGCAAAAGAGACAATAACTCTCTGGCACTGTAGCCTCCTCTCCAGTGGGCTACTGTGCTGGTaGGAAGCCTCTAGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: PFKAKETITLWHCSLLSSGLLCW*EASRSF
Trigger: GAAGGACCTAGAGGCTTCCCACCAGCACAGTAGCCC...ACTGGAGAGGAGGCTACAGTGCCAGAGAGTTATTGTCTCTTTTGCTTTAAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp ACCTTGCCAGCTGTACTGGCCTACACAGTTGGAAAGTTTGGAGGCTTTTGTCCGCACAGATTTTTCCCGTaGAGGCACCTGGTTTTCTAC +
Preference number: 4 (lower is better)
Translates to: TLPAVLAYTVGKFGGFCPHRFFP*RHLVFY
Trigger: GTAGAAAACCAGGTGCCTCCACGGGAAAAATCTGTG...CGGACAAAAGCCTCCAAACTTTCCAACTGTGTAGGCCAGTACAGCTGGCAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp TCATTTGTTTTGTCAAAGCCACAGTCAAGTGCTCCCTCTACACCACCCCCTCTTGTTTCTTGGGTGGGATaGGTGGAGGGTTTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: SFVLSKPQSSAPSTPPPLVSWVG*VEGFLS
Trigger: AGAGAGGAAACCCTCCACCCATCCCACCCAAGAAAC...AAGAGGGGGTGGTGTAGAGGGAGCACTTGACTGTGGCTTTGACAAAACAAATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp ACTTTAGTTTGCCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGTGTGCCTTGCCAGCTGTACTaGCCTACACAGTTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: TLVCHSSHCSQLFYIACVPCQLY*PTQLES
Trigger: ACTTTCCAACTGTGTAGGCCAGTACAGCTGGCAAGG...CACACAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp CAGCAAGCAGATGGAGCTGAACAGATGCCCTTTTTAAATGCGGCTTGGGCACTTGAGACAATAACTCTCTaGCACTGTAGCCTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: QQADGAEQMPFLNAAWALETITL*HCSLLS
Trigger: GGAGAGGAGGCTACAGTGCCAGAGAGTTATTGTCTC...AAGTGCCCAAGCCGCATTTAAAAAGGGCATCTGTTCAGCTCCATCTGCTTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR CAA 72 bp CCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTaGTGTGAGAGGCCTGTTTCACTCATTTATATGACC +
Preference number: 4 (lower is better)
Translates to: PQLPLLPAVLHR*CERPVSLIYMT
Trigger: GGTCATATAAATGAGTGAAACAGGCCTCTCACACAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR TCA 90 bp ACCTTGCCAGCTGTACTGGCCTACACAGTTGGAAAGTTTGGAGGCTTTTGTCCGATTGGTTTTTGCATATaGGTAAGCAGGAGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: TLPAVLAYTVGKFGGFCPIGFCI*VSRSGR
Trigger: CCTGCCACTCCTGCTTACTCATATGCAAAAACCAAT...CGGACAAAAGCCTCCAAACTTTCCAACTGTGTAGGCCAGTACAGCTGGCAAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR TCA 90 bp TCATTTGTTTTGTCAAAGCCACAGTCAAGTGCTCCCTCTACACCACCCCCTCTTTTTCCCTGGAGTAGGTaGATGGCTTGTGTCACCTCT +
Preference number: 4 (lower is better)
Translates to: SFVLSKPQSSAPSTPPPLFPWSR*MACVTS
Trigger: AGAGGTGACACAAGCCATTCACCTACTCCAGGGAAA...AAGAGGGGGTGGTGTAGAGGGAGCACTTGACTGTGGCTTTGACAAAACAAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR TCA 90 bp GTTCCATTTCAAGGACTAAGCATCAGAAGCACTCCTTATGAATTCACACACACAGGATGGTTGGGGACTTaGTTCCTGGAGACAGGGGGC +
Preference number: 4 (lower is better)
Translates to: VPFQGLSIRSTPYEFTHTGWLGT*FLETGG
Trigger: GCCCCCTGTCTCCAGGAATCAAGTCCCCAACCATCC...TGTGTGTGTGAATTCATAAGGAGTGCTTCTGATGCTTAGTCCTTGAAATGGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR TCA 90 bp ACCTTGCCAGCTGTACTGGCCTACACAGTTGGAAAGTTTGGAGGCTTTTGTCCGGCAAGCAGATGGAGCTaGACAGATGCCCTTTTTAAA +
Preference number: 4 (lower is better)
Translates to: TLPAVLAYTVGKFGGFCPASRWS*TDALFK
Trigger: TTTAAAAAGGGCATCTGTTCAGCTCCATCTGCTTGC...CGGACAAAAGCCTCCAAACTTTCCAACTGTGTAGGCCAGTACAGCTGGCAAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp ACACATACACACACACACACACAAATTGACAAGGCAGCACTGCTGACAGGCTATTGCCACAGCTCCCACTaGTCCCAGCTGTTTTACATC +
Preference number: 4 (lower is better)
Translates to: THTHTHTQIDKAALLTGYCHSSH*SQLFYI
Trigger: GATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCA...ATAGCCTGTCAGCAGTGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp GTTCCATTTCAAGGACTAAGCATCAGAAGCACTCCTTATGAATTCACACACACAGATGAGAGCTGCTTGTaGCGGGAGCGCTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: VPFQGLSIRSTPYEFTHTDESCL*RERSSS
Trigger: GGAAGAGGAGCGCTCCCGCCACAAGCAGCTCTCATC...TGTGTGTGTGAATTCATAAGGAGTGCTTCTGATGCTTAGTCCTTGAAATGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp ACTTTAGTTTGCCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGTGTGCTTCTTTCAGGGTTTTaGTCCGGTTCTCTTCTCGGT +
Preference number: 4 (lower is better)
Translates to: TLVCHSSHCSQLFYIACVLLSGF*SGSLLG
Trigger: ACCGAGAAGAGAACCGGACCAAAACCCTGAAAGAAG...CACACAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp CCACATCTAGTTGCTTCGGTAGGTAATCTTAATGTGCAGTTCTACTTGTCCTTTTGGGGACTTGATTCCTaGAGACAGGGGGCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: PHLVASVGNLNVQFYLSFWGLDS*RQGAQG
Trigger: CCCCTGAGCCCCCTGTCTCCAGGAATCAAGTCCCCA...AAAGGACAAGTAGAACTGCACATTAAGATTACCTACCGAAGCAACTAGATGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp CCATTTAAAGCAAAAGAGACAATAACTCTCTGGCACTGTAGCCTCCTCTCCAGTGGAGGTCAGGGCTGCTaGATAGATGTTGGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: PFKAKETITLWHCSLLSSGGQGC*IDVGSE
Trigger: CTCTGAGCCAACATCTATCCAGCAGCCCTGACCTCC...ACTGGAGAGGAGGCTACAGTGCCAGAGAGTTATTGTCTCTTTTGCTTTAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp TCATTTGTTTTGTCAAAGCCACAGTCAAGTGCTCCCTCTACACCACCCCCTCTTCCACTGATACACAAATaGTGGGTGGACAGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: SFVLSKPQSSAPSTPPPLPLIHK*WVDRLS
Trigger: TGAGAGCCTGTCCACCCACCATTTGTGTATCAGTGG...AAGAGGGGGTGGTGTAGAGGGAGCACTTGACTGTGGCTTTGACAAAACAAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp GTTCCATTTCAAGGACTAAGCATCAGAAGCACTCCTTATGAATTCACACACACACCAGCTGGGACAGCATaGGCTCCTGCATGTTCTTGC +
Preference number: 4 (lower is better)
Translates to: VPFQGLSIRSTPYEFTHTPAGTA*APACSC
Trigger: GCAAGAACATGCAGGAGCGCATGCTGTCCCAGCTGG...TGTGTGTGTGAATTCATAAGGAGTGCTTCTGATGCTTAGTCCTTGAAATGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp CAGCAAGCAGATGGAGCTGAACAGATGCCCTTTTTAAATGCGGCTTGGGCACTTTCATCTTGGCTATGTTaGTCCCATGGGTTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: QQADGAEQMPFLNAAWALSSWLC*SHGFFL
Trigger: CAGAAAGAACCCATGGGAGCAACATAGCCAAGATGA...AAGTGCCCAAGCCGCATTTAAAAAGGGCATCTGTTCAGCTCCATCTGCTTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp GGGCACTTTAGTTTGCCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGAAAATGCCATTAGCATaGTGGAAATGTGTCCAATGC +
Preference number: 4 (lower is better)
Translates to: GHFSLPQLPLLPAVLHRLKMPLA*WKCVQC
Trigger: GCATTGGACACATTTCCACCATGCTAATGGCATTTT...CAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp ACTTTAGTTTGCCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGTGTGTCCACTGGTTTCTCTTaGGCCAATGCCACAGATTTT +
Preference number: 4 (lower is better)
Translates to: TLVCHSSHCSQLFYIACVSTGFS*ANATDF
Trigger: AAAATCTGTGGCATTGGCCCAAGAGAAACCAGTGGA...CACACAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp AATTCACACACACACACACATACACACACACACACACAAATTGACAAGGCAGCAACTGGGCATTGGGACTaGAGTCTCAATCCCCACAGG +
Preference number: 4 (lower is better)
Translates to: NSHTHTHTHTHTQIDKAATGHWD*SLNPHR
Trigger: CCTGTGGGGATTGAGACTCCAGTCCCAATGCCCAGT...TGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp CCACATCTAGTTGCTTCGGTAGGTAATCTTAATGTGCAGTTCTACTTGTCCTTTACAGTGAGCTCCCACTaGAAGAGAGGGGACTGGGCA +
Preference number: 4 (lower is better)
Translates to: PHLVASVGNLNVQFYLSFTVSSH*KRGDWA
Trigger: TGCCCAGTCCCCTCTCTTCCAGTGGGAGCTCACTGT...AAAGGACAAGTAGAACTGCACATTAAGATTACCTACCGAAGCAACTAGATGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp GGAGTTGCCAATATACTCCATTGTGATTTATACACTGATTTCCATCACCTGCCTCTTGGGTGGGATGGGTaGAGGGTTTCCTCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: GVANILHCDLYTDFHHLPLGWDG*RVSSLS
Trigger: GCTGAGAGAGGAAACCCTCCACCCATCCCACCCAAG...AGGCAGGTGATGGAAATCAGTGTATAAATCACAATGGAGTATATTGGCAACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp CAGCAAGCAGATGGAGCTGAACAGATGCCCTTTTTAAATGCGGCTTGGGCACTTTTGCTACAACAGTATTaGAAGAGCAGCTGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: QQADGAEQMPFLNAAWALLLQQY*KSSCWQ
Trigger: TTGCCAGCAGCTGCTCTTCCAATACTGTTGTAGCAA...AAGTGCCCAAGCCGCATTTAAAAAGGGCATCTGTTCAGCTCCATCTGCTTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp CAGCAAGCAGATGGAGCTGAACAGATGCCCTTTTTAAATGCGGCTTGGGCACTTCCACTGTGTCTGAGCTaGGTTGTGGATAGTCTTATT +
Preference number: 4 (lower is better)
Translates to: QQADGAEQMPFLNAAWALPLCLS*VVDSLI
Trigger: AATAAGACTATCCACAACCCAGCTCAGACACAGTGG...AAGTGCCCAAGCCGCATTTAAAAAGGGCATCTGTTCAGCTCCATCTGCTTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp CAGCAAGCAGATGGAGCTGAACAGATGCCCTTTTTAAATGCGGCTTGGGCACTTGAAATACATGAGCCATaGATGGCTTCAGGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: QQADGAEQMPFLNAAWALEIHEP*MASGSL
Trigger: CAAAGACCCTGAAGCCATCCATGGCTCATGTATTTC...AAGTGCCCAAGCCGCATTTAAAAAGGGCATCTGTTCAGCTCCATCTGCTTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR TCA 90 bp AACTGCTTAGTGCTCAGGAGGGTTTCTCAAGGGCTCTATAAAGCTCAGCTTGTGTCAAATTCCAACTGTTaGGTCAGCCTCTCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: NCLVLRRVSQGLYKAQLVSNSNC*VSLSLS
Trigger: GGAAAGAGAGAGGCTGACTCAACAGTTGGAATTTGA...CACAAGCTGAGCTTTATAGAGCCCTTGAGAAACCCTCCTGAGCACTAAGCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR TCA 90 bp ACCTTGCCAGCTGTACTGGCCTACACAGTTGGAAAGTTTGGAGGCTTTTGTCCGACCTGGATGGGTCATTaGCTTCATTTGTTTTGTCAA +
Preference number: 4 (lower is better)
Translates to: TLPAVLAYTVGKFGGFCPTWMGH*LHLFCQ
Trigger: TTGACAAAACAAATGAAGTCAATGACCCATCCAGGT...CGGACAAAAGCCTCCAAACTTTCCAACTGTGTAGGCCAGTACAGCTGGCAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR TCA 90 bp TCATTTGTTTTGTCAAAGCCACAGTCAAGTGCTCCCTCTACACCACCCCCTCTTCAGAAGCACTCCTTATaGATTCACACACACACACAC +
Preference number: 4 (lower is better)
Translates to: SFVLSKPQSSAPSTPPPLQKHSL*IHTHTH
Trigger: GTGTGTGTGTGTGTGAATTCATAAGGAGTGCTTCTG...AAGAGGGGGTGGTGTAGAGGGAGCACTTGACTGTGGCTTTGACAAAACAAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp CAGCAAGCAGATGGAGCTGAACAGATGCCCTTTTTAAATGCGGCTTGGGCACTTTATAACAAGGTCCCTTaGTTCAAGCTCTCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: QQADGAEQMPFLNAAWALYNKVP*FKLSFK
Trigger: CTTGAAGGAGAGCTTGAAGCAAGGGACCTTGTTATA...AAGTGCCCAAGCCGCATTTAAAAAGGGCATCTGTTCAGCTCCATCTGCTTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp ACTTTAGTTTGCCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGTGTGTCTCTTTCTCTCAGCTaGCAACTCTTCTTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: TLVCHSSHCSQLFYIACVSLSLS*QLFFQF
Trigger: AAACTGGAAGAAGAGTTGGCAGCTGAGAGAAAGAGA...CACACAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp CAGCAAGCAGATGGAGCTGAACAGATGCCCTTTTTAAATGCGGCTTGGGCACTTACTGGTTTCTTCAATTaGTCATTAGGGCTACTGTGC +
Preference number: 4 (lower is better)
Translates to: QQADGAEQMPFLNAAWALTGFFN*SLGLLC
Trigger: GCACAGTAGCCCTAATGAGCAATTGAAGAAACCAGT...AAGTGCCCAAGCCGCATTTAAAAAGGGCATCTGTTCAGCTCCATCTGCTTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp CAGCAAGCAGATGGAGCTGAACAGATGCCCTTTTTAAATGCGGCTTGGGCACTTGAGACATCTTTGAGGTaGCTTTCTGGCTTCAGTAAA +
Preference number: 4 (lower is better)
Translates to: QQADGAEQMPFLNAAWALETSLR*LSGFSK
Trigger: TTTACTGAAGCCAGAAAGGCACCTCAAAGATGTCTC...AAGTGCCCAAGCCGCATTTAAAAAGGGCATCTGTTCAGCTCCATCTGCTTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp ACTTTAGTTTGCCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGTGTGCTGTTCAAGAACTTATaGAGGAAACTGGGAGTGACT +
Preference number: 4 (lower is better)
Translates to: TLVCHSSHCSQLFYIACVLFKNL*RKLGVT
Trigger: AGTCACTCCCAGTTTCCTGCATAAGTTCTTGAACAG...CACACAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp AACTGCTTAGTGCTCAGGAGGGTTTCTCAAGGGCTCTATAAAGCTCAGCTTGTGTGGATTTGTGCAGACTaGCTGCTTTTCGCCATCATT +
Preference number: 4 (lower is better)
Translates to: NCLVLRRVSQGLYKAQLVWICAD*LLFAII
Trigger: AATGATGGCGAAAAGCAGCCAGTCTGCACAAATCCA...CACAAGCTGAGCTTTATAGAGCCCTTGAGAAACCCTCCTGAGCACTAAGCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp AATTCACACACACACACACATACACACACACACACACAAATTGACAAGGCAGCACCTCGGCTGCCTTGTTaGTGGCTTTCTTGCACTCAA +
Preference number: 4 (lower is better)
Translates to: NSHTHTHTHTHTQIDKAAPRLPC*WLSCTQ
Trigger: TTGAGTGCAAGAAAGCCACCAACAAGGCAGCCGAGG...TGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp GGGCACTTTAGTTTGCCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGTTTGGACACGGTTACTaGTTTCTTCAATTGCTCATT +
Preference number: 4 (lower is better)
Translates to: GHFSLPQLPLLPAVLHRLFGHGY*FLQLLI
Trigger: AATGAGCAATTGAAGAAACCAGTAACCGTGTCCAAA...CAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp CAGCAAGCAGATGGAGCTGAACAGATGCCCTTTTTAAATGCGGCTTGGGCACTTGATCTAGGCTTCATTTaGAATTTCCTCACCTTCCTG +
Preference number: 4 (lower is better)
Translates to: QQADGAEQMPFLNAAWALDLGFI*NFLTFL
Trigger: CAGGAAGGTGAGGAAATTCCAAATGAAGCCTAGATC...AAGTGCCCAAGCCGCATTTAAAAAGGGCATCTGTTCAGCTCCATCTGCTTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp CCATTTAAAGCAAAAGAGACAATAACTCTCTGGCACTGTAGCCTCCTCTCCAGTCTGGTCTTGAACACCTaGTCTCAAGAGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: PFKAKETITLWHCSLLSSLVLNT*SQEILP
Trigger: TGGGAGGATCTCTTGAGACCAGGTGTTCAAGACCAG...ACTGGAGAGGAGGCTACAGTGCCAGAGAGTTATTGTCTCTTTTGCTTTAAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR CAA 72 bp TTCTATGAACCTTGCCAGCTGTACTGGCCTACACAGTaGGAAAGTTTGGAGGCTTTTGTCCGCATAGACTTG +
Preference number: 4 (lower is better)
Translates to: FYEPCQLYWPTQ*ESLEAFVRIDL
Trigger: CAAGTCTATGCGGACAAAAGCCTCCAAACTTTCCAACTGTGTAGGCCAGTACAGCTGGCAAGGTTCATAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR TCA 90 bp ACACATACACACACACACACACAAATTGACAAGGCAGCACTGCTGACAGGCTATACTCAGAAGTCTGACTaGGCTTTTGGACGAAATCTG +
Preference number: 4 (lower is better)
Translates to: THTHTHTQIDKAALLTGYTQKSD*AFGRNL
Trigger: CAGATTTCGTCCAAAAGCTCAGTCAGACTTCTGAGT...ATAGCCTGTCAGCAGTGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp ACTTTAGTTTGCCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGTGTGTGCATGTTCTTGCACTaGTTCATCACAACCTTAAGA +
Preference number: 4 (lower is better)
Translates to: TLVCHSSHCSQLFYIACVCMFLH*FITTLR
Trigger: TCTTAAGGTTGTGATGAAGCAGTGCAAGAACATGCA...CACACAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp ACTTTAGTTTGCCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGTGTGTTCCCATTCTACTTATaGAGCCTTGTTTCAGAACAC +
Preference number: 4 (lower is better)
Translates to: TLVCHSSHCSQLFYIACVFPFYL*SLVSEH
Trigger: GTGTTCTGAAACAAGGCTGCATAAGTAGAATGGGAA...CACACAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp AACTGCTTAGTGCTCAGGAGGGTTTCTCAAGGGCTCTATAAAGCTCAGCTTGTGCAAGCTAAATCCAGCTaGAGACGTGTTTGTTTAACC +
Preference number: 4 (lower is better)
Translates to: NCLVLRRVSQGLYKAQLVQAKSS*RRVCLT
Trigger: GGTTAAACAAACACGTCTGCAGCTGGATTTAGCTTG...CACAAGCTGAGCTTTATAGAGCCCTTGAGAAACCCTCCTGAGCACTAAGCAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp AACTGCTTAGTGCTCAGGAGGGTTTCTCAAGGGCTCTATAAAGCTCAGCTTGTGCTTAAGAATAGAGAGTaGATTTGTGCAGACTGGCTG +
Preference number: 4 (lower is better)
Translates to: NCLVLRRVSQGLYKAQLVLKNRE*ICADWL
Trigger: CAGCCAGTCTGCACAAATCCACTCTCTATTCTTAAG...CACAAGCTGAGCTTTATAGAGCCCTTGAGAAACCCTCCTGAGCACTAAGCAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp CCATTTAAAGCAAAAGAGACAATAACTCTCTGGCACTGTAGCCTCCTCTCCAGTAGAGACTGGCTTGATTaGCCCTTGTTGGCTAGTGAA +
Preference number: 4 (lower is better)
Translates to: PFKAKETITLWHCSLLSSRDWLD*PLLASE
Trigger: TTCACTAGCCAACAAGGGCCAATCAAGCCAGTCTCT...ACTGGAGAGGAGGCTACAGTGCCAGAGAGTTATTGTCTCTTTTGCTTTAAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp CCACATCTAGTTGCTTCGGTAGGTAATCTTAATGTGCAGTTCTACTTGTCCTTTAGCTCTGGGGATGGTTaGGGACTTGATTCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: PHLVASVGNLNVQFYLSFSSGDG*GLDSWR
Trigger: TCTCCAGGAATCAAGTCCCCAACCATCCCCAGAGCT...AAAGGACAAGTAGAACTGCACATTAAGATTACCTACCGAAGCAACTAGATGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp CAGCAAGCAGATGGAGCTGAACAGATGCCCTTTTTAAATGCGGCTTGGGCACTTCAGGTTCTGGCAGCTTaGAGAATAAGTGTAACAATT +
Preference number: 4 (lower is better)
Translates to: QQADGAEQMPFLNAAWALQVLAA*RISVTI
Trigger: AATTGTTACACTTATTCTCCAAGCTGCCAGAACCTG...AAGTGCCCAAGCCGCATTTAAAAAGGGCATCTGTTCAGCTCCATCTGCTTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp ACCTTGCCAGCTGTACTGGCCTACACAGTTGGAAAGTTTGGAGGCTTTTGTCCGTCAAACTATAAGCTGTaGAGTTGCCAATATACTCCA +
Preference number: 4 (lower is better)
Translates to: TLPAVLAYTVGKFGGFCPSNYKL*SCQYTP
Trigger: TGGAGTATATTGGCAACTCCACAGCTTATAGTTTGA...CGGACAAAAGCCTCCAAACTTTCCAACTGTGTAGGCCAGTACAGCTGGCAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp CCATTTAAAGCAAAAGAGACAATAACTCTCTGGCACTGTAGCCTCCTCTCCAGTTACATGAGCCATGGATaGCTTCAGGGTCTTTGGATC +
Preference number: 4 (lower is better)
Translates to: PFKAKETITLWHCSLLSSYMSHG*LQGLWI
Trigger: GATCCAAAGACCCTGAAGCCATCCATGGCTCATGTA...ACTGGAGAGGAGGCTACAGTGCCAGAGAGTTATTGTCTCTTTTGCTTTAAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR CAA 72 bp GAGTCTAACCTGGATGGGTCATTGACTTCATTTGTTTaGTCAAAGCCACAGTCAAGTGCTCCCTCTACACCA +
Preference number: 4 (lower is better)
Translates to: ESNLDGSLTSFV*SKPQSSAPSTP
Trigger: TGGTGTAGAGGGAGCACTTGACTGTGGCTTTGACAAAACAAATGAAGTCAATGACCCATCCAGGTTAGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR CAA 72 bp TCAAAGGATTTTCAAGTGCTTCTCTCTGGCTTGCATTaGCTAACATTGCAGCAGCAACAGCGCTGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: SKDFQVLLSGLH*LTLQQQQRWSS
Trigger: ACTACTCCAGCGCTGTTGCTGCTGCAATGTTAGCAAATGCAAGCCAGAGAGAAGCACTTGAAAATCCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR TCA 90 bp GTTCCATTTCAAGGACTAAGCATCAGAAGCACTCCTTATGAATTCACACACACATCTCTAGCATGTAGGTaGCATCATCTCCTTCAGCCG +
Preference number: 4 (lower is better)
Translates to: VPFQGLSIRSTPYEFTHTSLACR*HHLLQP
Trigger: CGGCTGAAGGAGATGATGTCACCTACATGCTAGAGA...TGTGTGTGTGAATTCATAAGGAGTGCTTCTGATGCTTAGTCCTTGAAATGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR TCA 90 bp ACTTTAGTTTGCCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGTGTGGGTCTTTGGATCCTATaGAGCCATCAAACAAATTTT +
Preference number: 4 (lower is better)
Translates to: TLVCHSSHCSQLFYIACVGLWIL*SHQTNF
Trigger: AAAATTTGTTTGATGGCTTCATAGGATCCAAAGACC...CACACAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp ACACATACACACACACACACACAAATTGACAAGGCAGCACTGCTGACAGGCTATTTCTCGGTTCAGTTTTaGTCTCAGTTGTTCCCTTTC +
Preference number: 4 (lower is better)
Translates to: THTHTHTQIDKAALLTGYFSVQF*SQLFPF
Trigger: GAAAGGGAACAACTGAGAGCAAAACTGAACCGAGAA...ATAGCCTGTCAGCAGTGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp ACCTTGCCAGCTGTACTGGCCTACACAGTTGGAAAGTTTGGAGGCTTTTGTCCGAACATCCTTACCATTTaGTACAACAGTATTGGAAGA +
Preference number: 4 (lower is better)
Translates to: TLPAVLAYTVGKFGGFCPNILTI*YNSIGR
Trigger: TCTTCCAATACTGTTGTAGCAAATGGTAAGGATGTT...CGGACAAAAGCCTCCAAACTTTCCAACTGTGTAGGCCAGTACAGCTGGCAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp AATTCACACACACACACACATACACACACACACACACAAATTGACAAGGCAGCAGTGCCTGGCCAGCTCTaGCTTTTTATGATACTGAAG +
Preference number: 4 (lower is better)
Translates to: NSHTHTHTHTHTQIDKAAVPGQL*LFMILK
Trigger: CTTCAGTATCATAAAAAGGCAGAGCTGGCCAGGCAC...TGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp TCATTTGTTTTGTCAAAGCCACAGTCAAGTGCTCCCTCTACACCACCCCCTCTTATGCCATTAGCATGGTaGAAATGTGTCCAATGCTTT +
Preference number: 4 (lower is better)
Translates to: SFVLSKPQSSAPSTPPPLMPLAW*KCVQCF
Trigger: AAAGCATTGGACACATTTCCACCATGCTAATGGCAT...AAGAGGGGGTGGTGTAGAGGGAGCACTTGACTGTGGCTTTGACAAAACAAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp ACTTTAGTTTGCCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGTGTGAAAGTATCTCTGTGTTaGGCCTTTAAGGCTTCTATA +
Preference number: 4 (lower is better)
Translates to: TLVCHSSHCSQLFYIACVKVSLC*AFKASI
Trigger: TATAGAAGCCTTAAAGGCCCAACACAGAGATACTTT...CACACAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp GTAACCATTTCCTATTCAAGTAACAGCAATCAGAATCAGAAGTTCCTTACACAAATGAGTAAGCAGGAGTaGCAGGACCAGGCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: VTISYSSNSNQNQKFLTQMSKQE*QDQAAQ
Trigger: CTGGGCTGCCTGGTCCTGCCACTCCTGCTTACTCAT...TTGTGTAAGGAACTTCTGATTCTGATTGCTGTTACTTGAATAGGAAATGGTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp AACTGCTTAGTGCTCAGGAGGGTTTCTCAAGGGCTCTATAAAGCTCAGCTTGTGATCTCTGGGTCACAATaGCCATTGGTTTTTGCATAT +
Preference number: 4 (lower is better)
Translates to: NCLVLRRVSQGLYKAQLVISGSQ*PLVFAY
Trigger: ATATGCAAAAACCAATGGCCATTGTGACCCAGAGAT...CACAAGCTGAGCTTTATAGAGCCCTTGAGAAACCCTCCTGAGCACTAAGCAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp GTTCCATTTCAAGGACTAAGCATCAGAAGCACTCCTTATGAATTCACACACACATCCCGTGGAGGCACCTaGTTTTCTACATTGTTGCCT +
Preference number: 4 (lower is better)
Translates to: VPFQGLSIRSTPYEFTHTSRGGT*FSTLLP
Trigger: AGGCAACAATGTAGAAAACCAGGTGCCTCCACGGGA...TGTGTGTGTGAATTCATAAGGAGTGCTTCTGATGCTTAGTCCTTGAAATGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp GTAACCATTTCCTATTCAAGTAACAGCAATCAGAATCAGAAGTTCCTTACACAAGAGGGGACTGGGCATTaGGACTGGAGTCTCAATCCC +
Preference number: 4 (lower is better)
Translates to: VTISYSSNSNQNQKFLTQEGTGH*DWSLNP
Trigger: GGGATTGAGACTCCAGTCCCAATGCCCAGTCCCCTC...TTGTGTAAGGAACTTCTGATTCTGATTGCTGTTACTTGAATAGGAAATGGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp GTTCCATTTCAAGGACTAAGCATCAGAAGCACTCCTTATGAATTCACACACACACCTGGAGTAGGTGAATaGCTTGTGTCACCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: VPFQGLSIRSTPYEFTHTPGVGE*LVSPLG
Trigger: TCCAAGAGGTGACACAAGCCATTCACCTACTCCAGG...TGTGTGTGTGAATTCATAAGGAGTGCTTCTGATGCTTAGTCCTTGAAATGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR TCA 90 bp ACACATACACACACACACACACAAATTGACAAGGCAGCACTGCTGACAGGCTATCTCATTGCCCACTTCTaGTTCATTAGGAAAACACAT +
Preference number: 4 (lower is better)
Translates to: THTHTHTQIDKAALLTGYLIAHF*FIRKTH
Trigger: ATGTGTTTTCCTAATGAATCAGAAGTGGGCAATGAG...ATAGCCTGTCAGCAGTGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp GTTCCATTTCAAGGACTAAGCATCAGAAGCACTCCTTATGAATTCACACACACAGCTCCTGCATGTTCTTaGACTGCTTCATCACAACCT +
Preference number: 4 (lower is better)
Translates to: VPFQGLSIRSTPYEFTHTAPACS*TASSQP
Trigger: AGGTTGTGATGAAGCAGTGCAAGAACATGCAGGAGC...TGTGTGTGTGAATTCATAAGGAGTGCTTCTGATGCTTAGTCCTTGAAATGGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp GGAGTTGCCAATATACTCCATTGTGATTTATACACTGATTTCCATCACCTGCCTTGTTGGTGGCTTTCTTaGACTCAAGCACTAGCATGG +
Preference number: 4 (lower is better)
Translates to: GVANILHCDLYTDFHHLPCWWLS*TQALAW
Trigger: CCATGCTAGTGCTTGAGTGCAAGAAAGCCACCAACA...AGGCAGGTGATGGAAATCAGTGTATAAATCACAATGGAGTATATTGGCAACTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp CCATTTAAAGCAAAAGAGACAATAACTCTCTGGCACTGTAGCCTCCTCTCCAGTTTGTTGGTCCTGATCTaGTTGGGACTGAAATTTGTG +
Preference number: 4 (lower is better)
Translates to: PFKAKETITLWHCSLLSSLLVLI*LGLKFV
Trigger: CACAAATTTCAGTCCCAAGCAGATCAGGACCAACAA...ACTGGAGAGGAGGCTACAGTGCCAGAGAGTTATTGTCTCTTTTGCTTTAAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp CCACATCTAGTTGCTTCGGTAGGTAATCTTAATGTGCAGTTCTACTTGTCCTTTGATTTCGATAGTCTGTaGCAAAGGGAGAGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: PHLVASVGNLNVQFYLSFDFDSL*QRESCW
Trigger: CCAACAGCTCTCCCTTTGGCACAGACTATCGAAATC...AAAGGACAAGTAGAACTGCACATTAAGATTACCTACCGAAGCAACTAGATGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp TCATTTGTTTTGTCAAAGCCACAGTCAAGTGCTCCCTCTACACCACCCCCTCTTAGGAATAAAGTTCAATaGATGATTGCCTTGGACAGT +
Preference number: 4 (lower is better)
Translates to: SFVLSKPQSSAPSTPPPLRNKVQ*MIALDS
Trigger: ACTGTCCAAGGCAATCATGCATTGAACTTTATTCCT...AAGAGGGGGTGGTGTAGAGGGAGCACTTGACTGTGGCTTTGACAAAACAAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp CTCCAGTTTAGAAAGTTTAGCTATTTTATCAACACTATTCGTTTTGGCTCTGCAAAAGCCACAGTCAAGTaGTCCCTCTACACCACCCCC +
Preference number: 4 (lower is better)
Translates to: LQFRKFSYFINTIRFGSAKATVK*SLYTTP
Trigger: GGGGGTGGTGTAGAGGGAGCACTTGACTGTGGCTTT...TGCAGAGCCAAAACGAATAGTGTTGATAAAATAGCTAAACTTTCTAAACTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp CTCCAGTTTAGAAAGTTTAGCTATTTTATCAACACTATTCGTTTTGGCTCTGCATTAGGGCTACTGTGCTaGTGGGAAGCCTCTAGGTCC +
Preference number: 4 (lower is better)
Translates to: LQFRKFSYFINTIRFGSALGLLC*WEASRS
Trigger: GGACCTAGAGGCTTCCCACCAGCACAGTAGCCCTAA...TGCAGAGCCAAAACGAATAGTGTTGATAAAATAGCTAAACTTTCTAAACTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp CCAATATACTCCATTGTGATTTATACACTGATTTCCATCACCTGCCTTTTTACTTGGAAGAGCAGCTGCTaGCAAGGTCTTCTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: PIYSIVIYTLISITCLFTWKSSC*QGLLQW
Trigger: CCACTGCAGAAGACCTTGCCAGCAGCTGCTCTTCCA...AGTAAAAAGGCAGGTGATGGAAATCAGTGTATAAATCACAATGGAGTATATTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp ACACATACACACACACACACACAAATTGACAAGGCAGCACTGCTGACAGGCTATAAGGCCTCTCCTGTATaGACACAAAATCATATAACC +
Preference number: 4 (lower is better)
Translates to: THTHTHTQIDKAALLTGYKASPV*TQNHIT
Trigger: GGTTATATGATTTTGTGTCCATACAGGAGAGGCCTT...ATAGCCTGTCAGCAGTGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp AATTCACACACACACACACATACACACACACACACACAAATTGACAAGGCAGCATACACAAATGGTGGGTaGACAGGCTCTCATTTCTCA +
Preference number: 4 (lower is better)
Translates to: NSHTHTHTHTHTQIDKAAYTNGG*TGSHFS
Trigger: TGAGAAATGAGAGCCTGTCCACCCACCATTTGTGTA...TGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR TCA 90 bp CTCCAGTTTAGAAAGTTTAGCTATTTTATCAACACTATTCGTTTTGGCTCTGCACGCTCCTCTTCCAGCTaGCTAGAGAGCTTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: LQFRKFSYFINTIRFGSARSSSS*LESFFC
Trigger: ACAGAAGAAGCTCTCTAGTCAGCTGGAAGAGGAGCG...TGCAGAGCCAAAACGAATAGTGTTGATAAAATAGCTAAACTTTCTAAACTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR TCA 90 bp CCACATCTAGTTGCTTCGGTAGGTAATCTTAATGTGCAGTTCTACTTGTCCTTTTCTGACTCAGAAGTCTaGCTGAGCTTTTGGACGAAA +
Preference number: 4 (lower is better)
Translates to: PHLVASVGNLNVQFYLSFSDSEV*LSFWTK
Trigger: TTTCGTCCAAAAGCTCAGTCAGACTTCTGAGTCAGA...AAAGGACAAGTAGAACTGCACATTAAGATTACCTACCGAAGCAACTAGATGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR TCA 90 bp GGAGTTGCCAATATACTCCATTGTGATTTATACACTGATTTCCATCACCTGCCTCAAATCACCACCTGGTaGTTCGCTTTCTTCATCACA +
Preference number: 4 (lower is better)
Translates to: GVANILHCDLYTDFHHLPQITTW*FAFFIT
Trigger: TGTGATGAAGAAAGCGAATCACCAGGTGGTGATTTG...AGGCAGGTGATGGAAATCAGTGTATAAATCACAATGGAGTATATTGGCAACTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp GTAACCATTTCCTATTCAAGTAACAGCAATCAGAATCAGAAGTTCCTTACACAAGACAGCATGCGCTCCTaGATGTTCTTGCACTGCTTC +
Preference number: 4 (lower is better)
Translates to: VTISYSSNSNQNQKFLTQDSMRS*MFLHCF
Trigger: GAAGCAGTGCAAGAACATGCAGGAGCGCATGCTGTC...TTGTGTAAGGAACTTCTGATTCTGATTGCTGTTACTTGAATAGGAAATGGTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp CCAATATACTCCATTGTGATTTATACACTGATTTCCATCACCTGCCTTTTTACTTTCAGCCGTATCCTGTaGATGCCGCTGCCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: PIYSIVIYTLISITCLFTFSRIL*MPLPFF
Trigger: GAAGAAAGGCAGCGGCATGCACAGGATACGGCTGAA...AGTAAAAAGGCAGGTGATGGAAATCAGTGTATAAATCACAATGGAGTATATTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp GTAACCATTTCCTATTCAAGTAACAGCAATCAGAATCAGAAGTTCCTTACACAAGAGGCTCAGTTGCTGTaGCTTTGGACACGGTTACTG +
Preference number: 4 (lower is better)
Translates to: VTISYSSNSNQNQKFLTQEAQLL*LWTRLL
Trigger: CAGTAACCGTGTCCAAAGGCACAGCAACTGAGCCTC...TTGTGTAAGGAACTTCTGATTCTGATTGCTGTTACTTGAATAGGAAATGGTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp GTTCCATTTCAAGGACTAAGCATCAGAAGCACTCCTTATGAATTCACACACACAAAATTTGTGGCGAGCTaGATGGAACCGTTGGTTGAT +
Preference number: 4 (lower is better)
Translates to: VPFQGLSIRSTPYEFTHTKFVAS*MEPLVD
Trigger: ATCAACCAACGGTTCCATGCAGCTCGCCACAAATTT...TGTGTGTGTGAATTCATAAGGAGTGCTTCTGATGCTTAGTCCTTGAAATGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp TCATTTGTTTTGTCAAAGCCACAGTCAAGTGCTCCCTCTACACCACCCCCTCTTTGCATGAACCACTTCTaGATAATTCAAAATGAGTGT +
Preference number: 4 (lower is better)
Translates to: SFVLSKPQSSAPSTPPPLCMNHF*IIQNEC
Trigger: ACACTCATTTTGAATTATGCAGAAGTGGTTCATGCA...AAGAGGGGGTGGTGTAGAGGGAGCACTTGACTGTGGCTTTGACAAAACAAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp AATTCACACACACACACACATACACACACACACACACAAATTGACAAGGCAGCAATTCCTGTGGAACAATaGTCATTGCCCACTTCTGAT +
Preference number: 4 (lower is better)
Translates to: NSHTHTHTHTHTQIDKAAIPVEQ*SLPTSD
Trigger: ATCAGAAGTGGGCAATGAGCATTGTTCCACAGGAAT...TGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp CTCCAGTTTAGAAAGTTTAGCTATTTTATCAACACTATTCGTTTTGGCTCTGCAAACTGCTTCTCTACCTaGGCCTCAGTCTGCAAGCCT +
Preference number: 4 (lower is better)
Translates to: LQFRKFSYFINTIRFGSANCFST*ASVCKP
Trigger: AGGCTTGCAGACTGAGGCCCAGGTAGAGAAGCAGTT...TGCAGAGCCAAAACGAATAGTGTTGATAAAATAGCTAAACTTTCTAAACTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp AATTCACACACACACACACATACACACACACACACACAAATTGACAAGGCAGCAATGAGTTTTGGTCAATaGAGTGGTAGCAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: NSHTHTHTHTHTQIDKAAMSFGQ*SGSRWR
Trigger: TCTCCATCTGCTACCACTCCATTGACCAAAACTCAT...TGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp CCACATCTAGTTGCTTCGGTAGGTAATCTTAATGTGCAGTTCTACTTGTCCTTTGTGGATAGTCTTATTTaGCAGAGGGGGATAGCCATT +
Preference number: 4 (lower is better)
Translates to: PHLVASVGNLNVQFYLSFVDSLI*QRGIAI
Trigger: AATGGCTATCCCCCTCTGCCAAATAAGACTATCCAC...AAAGGACAAGTAGAACTGCACATTAAGATTACCTACCGAAGCAACTAGATGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR CAA 72 bp GCAGAAATACATGAGCCATGGATGGCTTCAGGGTCTTaGGATCCTATGAAGCCATCAAACAAATTTTGCATA +
Preference number: 4 (lower is better)
Translates to: AEIHEPWMASGS*DPMKPSNKFCI
Trigger: TATGCAAAATTTGTTTGATGGCTTCATAGGATCCAAAGACCCTGAAGCCATCCATGGCTCATGTATTTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR TCA 90 bp GTTCCATTTCAAGGACTAAGCATCAGAAGCACTCCTTATGAATTCACACACACATTTCCAGATTCATCTTaGAAGCCTGATAATCGGCAG +
Preference number: 4 (lower is better)
Translates to: VPFQGLSIRSTPYEFTHTFPDSS*KPDNRQ
Trigger: CTGCCGATTATCAGGCTTTCAAGATGAATCTGGAAA...TGTGTGTGTGAATTCATAAGGAGTGCTTCTGATGCTTAGTCCTTGAAATGGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR TCA 90 bp CCACATCTAGTTGCTTCGGTAGGTAATCTTAATGTGCAGTTCTACTTGTCCTTTCATAGCGTTCTTCAATaGAAGTATCTCTGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: PHLVASVGNLNVQFYLSFHSVLQ*KYLCVG
Trigger: CCCAACACAGAGATACTTTCATTGAAGAACGCTATG...AAAGGACAAGTAGAACTGCACATTAAGATTACCTACCGAAGCAACTAGATGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR TCA 90 bp CCAATATACTCCATTGTGATTTATACACTGATTTCCATCACCTGCCTTTTTACTCATGGAACCGTTGGTTaGTCCCTACTTGGTACGATG +
Preference number: 4 (lower is better)
Translates to: PIYSIVIYTLISITCLFTHGTVG*SLLGTM
Trigger: CATCGTACCAAGTAGGGATCAACCAACGGTTCCATG...AGTAAAAAGGCAGGTGATGGAAATCAGTGTATAAATCACAATGGAGTATATTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR TCA 90 bp CCACATCTAGTTGCTTCGGTAGGTAATCTTAATGTGCAGTTCTACTTGTCCTTTCTTTTGGACGAAATCTaGTGGAATGTCAAACGTGGA +
Preference number: 4 (lower is better)
Translates to: PHLVASVGNLNVQFYLSFLLDEI*WNVKRG
Trigger: TCCACGTTTGACATTCCATCAGATTTCGTCCAAAAG...AAAGGACAAGTAGAACTGCACATTAAGATTACCTACCGAAGCAACTAGATGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR TCA 90 bp CCACATCTAGTTGCTTCGGTAGGTAATCTTAATGTGCAGTTCTACTTGTCCTTTCAGAAGTTTCTAGAATaGAAGAGGTTGCAACTTGGC +
Preference number: 4 (lower is better)
Translates to: PHLVASVGNLNVQFYLSFQKFLE*KRLQLG
Trigger: GCCAAGTTGCAACCTCTTTCATTCTAGAAACTTCTG...AAAGGACAAGTAGAACTGCACATTAAGATTACCTACCGAAGCAACTAGATGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR TCA 90 bp CCACATCTAGTTGCTTCGGTAGGTAATCTTAATGTGCAGTTCTACTTGTCCTTTAGCCATTATATTCTATaGACCTTGCCAGCTGTACTG +
Preference number: 4 (lower is better)
Translates to: PHLVASVGNLNVQFYLSFSHYIL*TLPAVL
Trigger: CAGTACAGCTGGCAAGGTTCATAGAATATAATGGCT...AAAGGACAAGTAGAACTGCACATTAAGATTACCTACCGAAGCAACTAGATGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR TCA 90 bp CTCCAGTTTAGAAAGTTTAGCTATTTTATCAACACTATTCGTTTTGGCTCTGCACTCAGAGAATGTATGTaGAGACACCAAGGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: LQFRKFSYFINTIRFGSALRECM*RHQGLS
Trigger: GGAGAGGCCTTGGTGTCTTCACATACATTCTCTGAG...TGCAGAGCCAAAACGAATAGTGTTGATAAAATAGCTAAACTTTCTAAACTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp GGAGTTGCCAATATACTCCATTGTGATTTATACACTGATTTCCATCACCTGCCTTTTGTGCAGACTGGCTaGTTTTCGCCATCATTTTTC +
Preference number: 4 (lower is better)
Translates to: GVANILHCDLYTDFHHLPFVQTG*FSPSFF
Trigger: GAAAAATGATGGCGAAAAGCAGCCAGTCTGCACAAA...AGGCAGGTGATGGAAATCAGTGTATAAATCACAATGGAGTATATTGGCAACTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp ACACATACACACACACACACACAAATTGACAAGGCAGCACTGCTGACAGGCTATAGTTCAATGCATGATTaGCTTGGACAGTTTAAGATA +
Preference number: 4 (lower is better)
Translates to: THTHTHTQIDKAALLTGYSSMHD*LGQFKI
Trigger: TATCTTAAACTGTCCAAGGCAATCATGCATTGAACT...ATAGCCTGTCAGCAGTGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp GTAACCATTTCCTATTCAAGTAACAGCAATCAGAATCAGAAGTTCCTTACACAAGCTGCATGGAACCGTTaGTTGATCCCTACTTGGTAC +
Preference number: 4 (lower is better)
Translates to: VTISYSSNSNQNQKFLTQAAWNR*LIPTWY
Trigger: GTACCAAGTAGGGATCAACCAACGGTTCCATGCAGC...TTGTGTAAGGAACTTCTGATTCTGATTGCTGTTACTTGAATAGGAAATGGTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp CTCCAGTTTAGAAAGTTTAGCTATTTTATCAACACTATTCGTTTTGGCTCTGCAATGGAATGTCAAACGTaGAGACTCCCTCCTAGGGAC +
Preference number: 4 (lower is better)
Translates to: LQFRKFSYFINTIRFGSAMECQT*RLPPRD
Trigger: GTCCCTAGGAGGGAGTCTCCACGTTTGACATTCCAT...TGCAGAGCCAAAACGAATAGTGTTGATAAAATAGCTAAACTTTCTAAACTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp CCAATATACTCCATTGTGATTTATACACTGATTTCCATCACCTGCCTTTTTACTTTCTACATTGTTGCCTaGAGTCAGCTCCCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: PIYSIVIYTLISITCLFTFYIVA*SQLPGS
Trigger: ACTACCAGGGAGCTGACTGCAGGCAACAATGTAGAA...AGTAAAAAGGCAGGTGATGGAAATCAGTGTATAAATCACAATGGAGTATATTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp CCAATATACTCCATTGTGATTTATACACTGATTTCCATCACCTGCCTTTTTACTTTTCTCTTGGGCCAATaGCACAGATTTTTCCCGTGG +
Preference number: 4 (lower is better)
Translates to: PIYSIVIYTLISITCLFTFLLGQ*HRFFPW
Trigger: CCACGGGAAAAATCTGTGGCATTGGCCCAAGAGAAA...AGTAAAAAGGCAGGTGATGGAAATCAGTGTATAAATCACAATGGAGTATATTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp CCATTTAAAGCAAAAGAGACAATAACTCTCTGGCACTGTAGCCTCCTCTCCAGTTCTGGAATAAAAATCTaGATGAACCACTTCTGCATA +
Preference number: 4 (lower is better)
Translates to: PFKAKETITLWHCSLLSSSGIKI*MNHFCI
Trigger: TATGCAGAAGTGGTTCATGCAGATTTTTATTCCAGA...ACTGGAGAGGAGGCTACAGTGCCAGAGAGTTATTGTCTCTTTTGCTTTAAATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp AATTCACACACACACACACATACACACACACACACACAAATTGACAAGGCAGCACTGATTTCCATCACCTaGCTTTTTACTATCAACTCT +
Preference number: 4 (lower is better)
Translates to: NSHTHTHTHTHTQIDKAALISIT*LFTINS
Trigger: AGAGTTGATAGTAAAAAGGCAGGTGATGGAAATCAG...TGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp CTCCAGTTTAGAAAGTTTAGCTATTTTATCAACACTATTCGTTTTGGCTCTGCACAGTTGCTGTGCCTTTaGACACGGTTACTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: LQFRKFSYFINTIRFGSAQLLCL*TRLLVS
Trigger: AGAAACCAGTAACCGTGTCCAAAGGCACAGCAACTG...TGCAGAGCCAAAACGAATAGTGTTGATAAAATAGCTAAACTTTCTAAACTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp CCAATATACTCCATTGTGATTTATACACTGATTTCCATCACCTGCCTTTTTACTCAGTGTTTGTCATCTTaGCTATGTTGCTCCCATGGG +
Preference number: 4 (lower is better)
Translates to: PIYSIVIYTLISITCLFTQCLSS*LCCSHG
Trigger: CCCATGGGAGCAACATAGCCAAGATGACAAACACTG...AGTAAAAAGGCAGGTGATGGAAATCAGTGTATAAATCACAATGGAGTATATTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp GTAACCATTTCCTATTCAAGTAACAGCAATCAGAATCAGAAGTTCCTTACACAATTGATTGGCCCTTGTTaGCTAGTGAATCTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: VTISYSSNSNQNQKFLTQLIGPC*LVNLES
Trigger: GCTCTCCAGATTCACTAGCCAACAAGGGCCAATCAA...TTGTGTAAGGAACTTCTGATTCTGATTGCTGTTACTTGAATAGGAAATGGTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR TCA 90 bp GGAGTTGCCAATATACTCCATTGTGATTTATACACTGATTTCCATCACCTGCCTGCAGGAAACTGGGAGTaGCTTAATTTTTCAAAAGTA +
Preference number: 4 (lower is better)
Translates to: GVANILHCDLYTDFHHLPAGNWE*LNFSKV
Trigger: TACTTTTGAAAAATTAAGTCACTCCCAGTTTCCTGC...AGGCAGGTGATGGAAATCAGTGTATAAATCACAATGGAGTATATTGGCAACTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR TCA 90 bp CTCCAGTTTAGAAAGTTTAGCTATTTTATCAACACTATTCGTTTTGGCTCTGCAACAAAATTCCTCCTTTaGTTGTGTCCCAGCCACATC +
Preference number: 4 (lower is better)
Translates to: LQFRKFSYFINTIRFGSATKFLL*LCPSHI
Trigger: GATGTGGCTGGGACACAATCAAAGGAGGAATTTTGT...TGCAGAGCCAAAACGAATAGTGTTGATAAAATAGCTAAACTTTCTAAACTGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR TCA 90 bp GTTCCATTTCAAGGACTAAGCATCAGAAGCACTCCTTATGAATTCACACACACAGTTTTGAAAGACAGTTaGAGTTCCATTTCAAGGACT +
Preference number: 4 (lower is better)
Translates to: VPFQGLSIRSTPYEFTHTVLKDS*SSISRT
Trigger: AGTCCTTGAAATGGAACTTCAACTGTCTTTCAAAAC...TGTGTGTGTGAATTCATAAGGAGTGCTTCTGATGCTTAGTCCTTGAAATGGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp AATTCACACACACACACACATACACACACACACACACAAATTGACAAGGCAGCACTTCCCAACAAAATATaGCCAAATTGTGCCATTTTT +
Preference number: 4 (lower is better)
Translates to: NSHTHTHTHTHTQIDKAALPNKI*PNCAIF
Trigger: AAAAATGGCACAATTTGGGCATATTTTGTTGGGAAG...TGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp CCAATATACTCCATTGTGATTTATACACTGATTTCCATCACCTGCCTTTTTACTGCTATGTTGCTCCCATaGGTTCTTTCTGCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: PIYSIVIYTLISITCLFTAMLLP*VLSAGK
Trigger: TTTTCCAGCAGAAAGAACCCATGGGAGCAACATAGC...AGTAAAAAGGCAGGTGATGGAAATCAGTGTATAAATCACAATGGAGTATATTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp CTCCAGTTTAGAAAGTTTAGCTATTTTATCAACACTATTCGTTTTGGCTCTGCATGTCACCTCTTGGATTaGCAGTGTTGGCTAGATTTC +
Preference number: 4 (lower is better)
Translates to: LQFRKFSYFINTIRFGSACHLLD*QCWLDF
Trigger: GAAATCTAGCCAACACTGCCAATCCAAGAGGTGACA...TGCAGAGCCAAAACGAATAGTGTTGATAAAATAGCTAAACTTTCTAAACTGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp CCAATATACTCCATTGTGATTTATACACTGATTTCCATCACCTGCCTTTTTACTACTGGCCTACACAGTTaGAAAGTTTGGAGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: PIYSIVIYTLISITCLFTTGLHS*KVWRLL
Trigger: CAAAAGCCTCCAAACTTTCCAACTGTGTAGGCCAGT...AGTAAAAAGGCAGGTGATGGAAATCAGTGTATAAATCACAATGGAGTATATTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp GTTCCATTTCAAGGACTAAGCATCAGAAGCACTCCTTATGAATTCACACACACACAACACTATTCGTTTTaGCTCTGCATAGGAATAAAG +
Preference number: 4 (lower is better)
Translates to: VPFQGLSIRSTPYEFTHTQHYSF*LCIGIK
Trigger: CTTTATTCCTATGCAGAGCCAAAACGAATAGTGTTG...TGTGTGTGTGAATTCATAAGGAGTGCTTCTGATGCTTAGTCCTTGAAATGGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp GTTCCATTTCAAGGACTAAGCATCAGAAGCACTCCTTATGAATTCACACACACAATCATTACAATCTGTTaGCCAGTAACAGCTTTTGCA +
Preference number: 4 (lower is better)
Translates to: VPFQGLSIRSTPYEFTHTIITIC*PVTAFA
Trigger: TGCAAAAGCTGTTACTGGCCAACAGATTGTAATGAT...TGTGTGTGTGAATTCATAAGGAGTGCTTCTGATGCTTAGTCCTTGAAATGGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp GTTCCATTTCAAGGACTAAGCATCAGAAGCACTCCTTATGAATTCACACACACATCTATAATACCTAACTaGGTTATTGGATCCATTGCA +
Preference number: 4 (lower is better)
Translates to: VPFQGLSIRSTPYEFTHTSIIPN*VIGSIA
Trigger: TGCAATGGATCCAATAACCCAGTTAGGTATTATAGA...TGTGTGTGTGAATTCATAAGGAGTGCTTCTGATGCTTAGTCCTTGAAATGGAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CCA 90 bp CTCCAGTTTAGAAAGTTTAGCTATTTTATCAACACTATTCGTTTTGGCTCTGCATGTCTTAGTTCCTTATaGAGTCTAACCTGGATGGGT +
Preference number: 4 (lower is better)
Translates to: LQFRKFSYFINTIRFGSACLSSL*SLTWMG
Trigger: ACCCATCCAGGTTAGACTCCATAAGGAACTAAGACA...TGCAGAGCCAAAACGAATAGTGTTGATAAAATAGCTAAACTTTCTAAACTGGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR GCA 90 bp GTAACCATTTCCTATTCAAGTAACAGCAATCAGAATCAGAAGTTCCTTACACAACAAAGGATTTTCAAGTaGTTCTCTCTGGCTTGCATT +
Preference number: 4 (lower is better)
Translates to: VTISYSSNSNQNQKFLTQQRIFK*FSLACI
Trigger: AATGCAAGCCAGAGAGAAGCACTTGAAAATCCTTTG...TTGTGTAAGGAACTTCTGATTCTGATTGCTGTTACTTGAATAGGAAATGGTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
3UTR CAA 72 bp AGGGTCTTTGGATCCTATGAAGCCATCAAACAAATTTaGCATATAGGCATATTCATTTTTCTAGGGATAAAC +
Preference number: 4 (lower is better)
Translates to: RVFGSYEAIKQI*HIGIFIFLGIN
Trigger: GTTTATCCCTAGAAAAATGAATATGCCTATATGCAAAATTTGTTTGATGGCTTCATAGGATCCAAAGACCCT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS CCA 90 bp CAGTGCTGCTGGGAGACAGTGAGCTCCCACTGGAAGAGAGGGGACTaGGCATTGGGACTGGAGTCTCAATCCCCACAGGACACCCACCAT +
Preference number: 5 (lower is better)
Translates to: QCCWETVSSHWKRGD*ALGLESQSPQDTHH
Trigger: ATGGTGGGTGTCCTGTGGGGATTGAGACTCCAGTCCCAATGCCCAGTCCCCTCTCTTCCAGTGGGAGCTCACTGTCTCCCAGCAGCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS CCA 90 bp CCTCGGCTGCCTTGTTGGTGGCTTTCTTGCACTCAAGCACTAGCATaGATGAGAGCTGCTTGTGGCGGGAGCGCTCCTCTTCCAGCTGAC +
Preference number: 5 (lower is better)
Translates to: PRLPCWWLSCTQALA*MRAACGGSAPLPAD
Trigger: GTCAGCTGGAAGAGGAGCGCTCCCGCCACAAGCAGCTCTCATCCATGCTAGTGCTTGAGTGCAAGAAAGCCACCAACAAGGCAGCCGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271277.11
ENST00000441739.1
CDS GCA 90 bp CTCCTGCCTTCTGTCCTTCCTCGGCTGCCTTGTTGGTGGCTTTCTTaGACTCAAGCACTAGCATGGATGAGAGCTGCTTGTGGCGGGAGC +
Preference number: 5 (lower is better)
Translates to: LLPSVLPRLPCWWLS*TQALAWMRAACGGS
Trigger: GCTCCCGCCACAAGCAGCTCTCATCCATGCTAGTGCTTGAGTGCAAGAAAGCCACCAACAAGGCAGCCGAGGAAGGACAGAAGGCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271277.11
ENST00000441739.1
CDS TCA 90 bp CCCCAACCCTTGAAGAAAGCACCCACTGGTGTCTGTCAGTCTCCCTaGAACAGAACTCACCTCTTGGGGACGTCTTGTGCCTCCGTCTCT +
Preference number: 5 (lower is better)
Translates to: PQPLKKAPTGVCQSP*NRTHLLGTSCASVS
Trigger: AGAGACGGAGGCACAAGACGTCCCCAAGAGGTGAGTTCTGTTTCAGGGAGACTGACAGACACCAGTGGGTGCTTTCTTCAAGGGTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607039.1
CDS CCA 90 bp TGGGACTGGAGTCTCAATCCCCACAGGACACCCACCATTCTCCACTaGTTTCTCTTGGGCCAATGCCACAGATTTTTCCCGTGGAGGCAC +
Preference number: 5 (lower is better)
Translates to: WDWSLNPHRTPTILH*FLLGQCHRFFPWRH
Trigger: GTGCCTCCACGGGAAAAATCTGTGGCATTGGCCCAAGAGAAACCAGTGGAGAATGGTGGGTGTCCTGTGGGGATTGAGACTCCAGTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS CCA 90 bp GACAGGGGGCTCAGGGGACTGGACACTTTCCCTGGAGTAGGTGAATaGCTTGTGTCACCTCTTGGATTGGCAGTGTTGGCTAGATTTCGA +
Preference number: 5 (lower is better)
Translates to: DRGLRGLDTFPGVGE*LVSPLGLAVLARFR
Trigger: TCGAAATCTAGCCAACACTGCCAATCCAAGAGGTGACACAAGCCATTCACCTACTCCAGGGAAAGTGTCCAGTCCCCTGAGCCCCCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271277.11
ENST00000607039.1
CDS CCA 90 bp GAGCTCCTTCTTAGGTCAGCCCCAACCCTTGAAGAAAGCACCCACTaGTGTCTGTCAGTCTCCCTGAAACAGAACTCACCTCTTGGGGAC +
Preference number: 5 (lower is better)
Translates to: ELLLRSAPTLEESTH*CLSVSLKQNSPLGD
Trigger: GTCCCCAAGAGGTGAGTTCTGTTTCAGGGAGACTGACAGACACCAGTGGGTGCTTTCTTCAAGGGTTGGGGCTGACCTAAGAAGGAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607039.1
CDS CCA 90 bp CACCCACTGGTGTCTGTCAGTCTCCCTGAAACAGAACTCACCTCTTaGGGACGTCTTGTGCCTCCGTCTCTGACCTTATCCATTTGCTAC +
Preference number: 5 (lower is better)
Translates to: HPLVSVSLPETELTS*GRLVPPSLTLSICY
Trigger: GTAGCAAATGGATAAGGTCAGAGACGGAGGCACAAGACGTCCCCAAGAGGTGAGTTCTGTTTCAGGGAGACTGACAGACACCAGTGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607039.1
CDS-3UTR CAA 90 bp ACCTTGCCAGCTGTACTGGCCTACACAGTTGGAAAGTTTGGAGGCTTTTGTCCGCGCTCCTGCATGTTCTaGCACTGCTTCATCACAACC +
Preference number: 5 (lower is better)
Translates to: TLPAVLAYTVGKFGGFCPRSCMF*HCFITT
Trigger: GGTTGTGATGAAGCAGTGCAAGAACATGCAGGAGCG...CGGACAAAAGCCTCCAAACTTTCCAACTGTGTAGGCCAGTACAGCTGGCAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp ACTTTAGTTTGCCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGTGTGTCCTCGGCTGCCTTGTaGGTGGCTTTCTTGCACTCA +
Preference number: 5 (lower is better)
Translates to: TLVCHSSHCSQLFYIACVSSAAL*VAFLHS
Trigger: TGAGTGCAAGAAAGCCACCAACAAGGCAGCCGAGGA...CACACAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp CCATTTAAAGCAAAAGAGACAATAACTCTCTGGCACTGTAGCCTCCTCTCCAGTGTGAGGCCAGGTTTCTaGGGTGGGATGGGTGGAGGG +
Preference number: 5 (lower is better)
Translates to: PFKAKETITLWHCSLLSSVRPGF*GGMGGG
Trigger: CCCTCCACCCATCCCACCCAAGAAACCTGGCCTCAC...ACTGGAGAGGAGGCTACAGTGCCAGAGAGTTATTGTCTCTTTTGCTTTAAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS GCA 90 bp CACAGATTTTTCCCGTGGAGGCACCTGGTTTTCTACATTGTTGCCTaGAGTCAGCTCCCTGGTAGTTTGTATCTCTGGGTCACAATGGCC +
Preference number: 5 (lower is better)
Translates to: HRFFPWRHLVFYIVA*SQLPGSLYLWVTMA
Trigger: GGCCATTGTGACCCAGAGATACAAACTACCAGGGAGCTGACTGCAGGCAACAATGTAGAAAACCAGGTGCCTCCACGGGAAAAATCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS CCA 90 bp CTGGGTCACAATGGCCATTGGTTTTTGCATATGAGTAAGCAGGAGTaGCAGGACCAGGCAGCCCAGTGTTTGTCATCTTGGCTATGTTGC +
Preference number: 5 (lower is better)
Translates to: LGHNGHWFLHMSKQE*QDQAAQCLSSWLCC
Trigger: GCAACATAGCCAAGATGACAAACACTGGGCTGCCTGGTCCTGCCACTCCTGCTTACTCATATGCAAAAACCAATGGCCATTGTGACCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS CCA 90 bp GGTTTCTCTTGGGCCAATGCCACAGATTTTTCCCGTGGAGGCACCTaGTTTTCTACATTGTTGCCTGCAGTCAGCTCCCTGGTAGTTTGT +
Preference number: 5 (lower is better)
Translates to: GFSWANATDFSRGGT*FSTLLPAVSSLVVC
Trigger: ACAAACTACCAGGGAGCTGACTGCAGGCAACAATGTAGAAAACCAGGTGCCTCCACGGGAAAAATCTGTGGCATTGGCCCAAGAGAAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS CCA 90 bp ATTCTCCACTGGTTTCTCTTGGGCCAATGCCACAGATTTTTCCCGTaGAGGCACCTGGTTTTCTACATTGTTGCCTGCAGTCAGCTCCCT +
Preference number: 5 (lower is better)
Translates to: ILHWFLLGQCHRFFP*RHLVFYIVACSQLP
Trigger: AGGGAGCTGACTGCAGGCAACAATGTAGAAAACCAGGTGCCTCCACGGGAAAAATCTGTGGCATTGGCCCAAGAGAAACCAGTGGAGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp ACCTTGCCAGCTGTACTGGCCTACACAGTTGGAAAGTTTGGAGGCTTTTGTCCGGCATGGAACCGTTGGTaGATCCCTACTTGGTACGAT +
Preference number: 5 (lower is better)
Translates to: TLPAVLAYTVGKFGGFCPAWNRW*IPTWYD
Trigger: ATCGTACCAAGTAGGGATCAACCAACGGTTCCATGC...CGGACAAAAGCCTCCAAACTTTCCAACTGTGTAGGCCAGTACAGCTGGCAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp ACTTTAGTTTGCCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGTGTGGGCTTGTGTCACCTCTaGGATTGGCAGTGTTGGCTA +
Preference number: 5 (lower is better)
Translates to: TLVCHSSHCSQLFYIACVGLCHL*DWQCWL
Trigger: TAGCCAACACTGCCAATCCAAGAGGTGACACAAGCC...CACACAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS CCA 90 bp GGACCAGGCAGCCCAGTGTTTGTCATCTTGGCTATGTTGCTCCCATaGGTTCTTTCTGCTGGAAAACTCTCTGTTTGGCAAAACACAGAC +
Preference number: 5 (lower is better)
Translates to: GPGSPVFVILAMLLP*VLSAGKLSVWQNTD
Trigger: GTCTGTGTTTTGCCAAACAGAGAGTTTTCCAGCAGAAAGAACCCATGGGAGCAACATAGCCAAGATGACAAACACTGGGCTGCCTGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp GGGCACTTTAGTTTGCCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGGACAAAATTCCTCCTTaGATTGTGTCCCAGCCACAT +
Preference number: 5 (lower is better)
Translates to: GHFSLPQLPLLPAVLHRLDKIPP*IVSQPH
Trigger: ATGTGGCTGGGACACAATCAAAGGAGGAATTTTGTC...CAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp ACACATACACACACACACACACAAATTGACAAGGCAGCACTGCTGACAGGCTATCTTGGGCACTTTAGTTaGCCACAGCTCCCACTGCTC +
Preference number: 5 (lower is better)
Translates to: THTHTHTQIDKAALLTGYLGHFS*PQLPLL
Trigger: GAGCAGTGGGAGCTGTGGCAAACTAAAGTGCCCAAG...ATAGCCTGTCAGCAGTGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp GGGCACTTTAGTTTGCCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGCAATGCATGATTGCCTaGGACAGTTTAAGATACCCC +
Preference number: 5 (lower is better)
Translates to: GHFSLPQLPLLPAVLHRLQCMIA*DSLRYP
Trigger: GGGGTATCTTAAACTGTCCAAGGCAATCATGCATTG...CAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS GCA 90 bp AACTTCACAGTGGTGTGGACAGAGCCACATGTTGTATGCTCCTTGTaGTCCTCCAGTCTAACAGTGAAACAAACGCTGCCACTATTGGGA +
Preference number: 5 (lower is better)
Translates to: NFTVVWTEPHVVCSL*SSSLTVKQTLPLLG
Trigger: TCCCAATAGTGGCAGCGTTTGTTTCACTGTTAGACTGGAGGAGCACAAGGAGCATACAACATGTGGCTCTGTCCACACCACTGTGAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607039.1
CDS GCA 90 bp AGAACCAACAACTTCACAGTGGTGTGGACAGAGCCACATGTTGTATaGTCCTTGTGCTCCTCCAGTCTAACAGTGAAACAAACGCTGCCA +
Preference number: 5 (lower is better)
Translates to: RTNNFTVVWTEPHVV*SLCSSSLTVKQTLP
Trigger: TGGCAGCGTTTGTTTCACTGTTAGACTGGAGGAGCACAAGGAGCATACAACATGTGGCTCTGTCCACACCACTGTGAAGTTGTTGGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607039.1
CDS-3UTR CAA 90 bp ACTTTAGTTTGCCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGTGTGTTGTTGGTGGCTTTCTaGCACTCAAGCACTAGCATG +
Preference number: 5 (lower is better)
Translates to: TLVCHSSHCSQLFYIACVLLVAF*HSSTSM
Trigger: CATGCTAGTGCTTGAGTGCAAGAAAGCCACCAACAA...CACACAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp AATTCACACACACACACACATACACACACACACACACAAATTGACAAGGCAGCACCTTCCTCGGCTGCCTaGTTGGTGGCTTTCTTGCAC +
Preference number: 5 (lower is better)
Translates to: NSHTHTHTHTHTQIDKAAPSSAA*LVAFLH
Trigger: GTGCAAGAAAGCCACCAACAAGGCAGCCGAGGAAGG...TGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp GGGCACTTTAGTTTGCCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGTACTGGTTTCTTCAATaGCTCATTAGGGCTACTGTG +
Preference number: 5 (lower is better)
Translates to: GHFSLPQLPLLPAVLHRLYWFLQ*LIRATV
Trigger: CACAGTAGCCCTAATGAGCAATTGAAGAAACCAGTA...CAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp TCATTTGTTTTGTCAAAGCCACAGTCAAGTGCTCCCTCTACACCACCCCCTCTTCCAGTGTTTGTCATCTaGGCTATGTTGCTCCCATGG +
Preference number: 5 (lower is better)
Translates to: SFVLSKPQSSAPSTPPPLPVFVI*AMLLPW
Trigger: CCATGGGAGCAACATAGCCAAGATGACAAACACTGG...AAGAGGGGGTGGTGTAGAGGGAGCACTTGACTGTGGCTTTGACAAAACAAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp ACACATACACACACACACACACAAATTGACAAGGCAGCACTGCTGACAGGCTATCCAAAGGGAGAGCTGTaGGGAGAGACTGGCTTGATT +
Preference number: 5 (lower is better)
Translates to: THTHTHTQIDKAALLTGYPKGEL*GETGLI
Trigger: AATCAAGCCAGTCTCTCCCAACAGCTCTCCCTTTGG...ATAGCCTGTCAGCAGTGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp GTTCCATTTCAAGGACTAAGCATCAGAAGCACTCCTTATGAATTCACACACACAGGGATGGTTGGGGACTaGATTCCTGGAGACAGGGGG +
Preference number: 5 (lower is better)
Translates to: VPFQGLSIRSTPYEFTHTGMVGD*IPGDRG
Trigger: CCCCCTGTCTCCAGGAATCAAGTCCCCAACCATCCC...TGTGTGTGTGAATTCATAAGGAGTGCTTCTGATGCTTAGTCCTTGAAATGGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp TCATTTGTTTTGTCAAAGCCACAGTCAAGTGCTCCCTCTACACCACCCCCTCTTGAGCTTGAGACATCTTaGAGGTGCCTTTCTGGCTTC +
Preference number: 5 (lower is better)
Translates to: SFVLSKPQSSAPSTPPPLELETS*RCLSGF
Trigger: GAAGCCAGAAAGGCACCTCAAAGATGTCTCAAGCTC...AAGAGGGGGTGGTGTAGAGGGAGCACTTGACTGTGGCTTTGACAAAACAAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp CAGCAAGCAGATGGAGCTGAACAGATGCCCTTTTTAAATGCGGCTTGGGCACTTCTTCTCGGTTCAGTTTaGCTCTCAGTTGTTCCCTTT +
Preference number: 5 (lower is better)
Translates to: QQADGAEQMPFLNAAWALLLGSV*LSVVPF
Trigger: AAAGGGAACAACTGAGAGCAAAACTGAACCGAGAAG...AAGTGCCCAAGCCGCATTTAAAAAGGGCATCTGTTCAGCTCCATCTGCTTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp ACACATACACACACACACACACAAATTGACAAGGCAGCACTGCTGACAGGCTATTCAGTTGCTGTGCCTTaGGACACGGTTACTGGTTTC +
Preference number: 5 (lower is better)
Translates to: THTHTHTQIDKAALLTGYSVAVP*DTVTGF
Trigger: GAAACCAGTAACCGTGTCCAAAGGCACAGCAACTGA...ATAGCCTGTCAGCAGTGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp AACTGCTTAGTGCTCAGGAGGGTTTCTCAAGGGCTCTATAAAGCTCAGCTTGTGGTCATCTTGGCTATGTaGCTCCCATGGGTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: NCLVLRRVSQGLYKAQLVVILAM*LPWVLS
Trigger: AGAAAGAACCCATGGGAGCAACATAGCCAAGATGAC...CACAAGCTGAGCTTTATAGAGCCCTTGAGAAACCCTCCTGAGCACTAAGCAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp ACACATACACACACACACACACAAATTGACAAGGCAGCACTGCTGACAGGCTATTTGGTCCTGATCTGCTaGGGACTGAAATTTGTGGCG +
Preference number: 5 (lower is better)
Translates to: THTHTHTQIDKAALLTGYLVLIC*GLKFVA
Trigger: CGCCACAAATTTCAGTCCCAAGCAGATCAGGACCAA...ATAGCCTGTCAGCAGTGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp TCATTTGTTTTGTCAAAGCCACAGTCAAGTGCTCCCTCTACACCACCCCCTCTTTTTGCTACAACAGTATaGGAAGAGCAGCTGCTGGCA +
Preference number: 5 (lower is better)
Translates to: SFVLSKPQSSAPSTPPPLFATTV*EEQLLA
Trigger: TGCCAGCAGCTGCTCTTCCAATACTGTTGTAGCAAA...AAGAGGGGGTGGTGTAGAGGGAGCACTTGACTGTGGCTTTGACAAAACAAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp ACTTTAGTTTGCCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGTGTGTACTGGCCTACACAGTaGGAAAGTTTGGAGGCTTTT +
Preference number: 5 (lower is better)
Translates to: TLVCHSSHCSQLFYIACVYWPTQ*ESLEAF
Trigger: AAAAGCCTCCAAACTTTCCAACTGTGTAGGCCAGTA...CACACAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS GCA 90 bp AGTTTTGCTCTCAGTTGTTCCCTTTCGATGTCAAACTCTGATAACTaGTTCTCTACCTGGGCCTCAGTCTGCAAGCCTCTCTTTCTCTCA +
Preference number: 5 (lower is better)
Translates to: SFALSCSLSMSNSDN*FSTWASVCKPLFLS
Trigger: TGAGAGAAAGAGAGGCTTGCAGACTGAGGCCCAGGTAGAGAAGCAGTTATCAGAGTTTGACATCGAAAGGGAACAACTGAGAGCAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271277.11
ENST00000441739.1
CDS-3UTR CAA 90 bp ACTTTAGTTTGCCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGTGTGAGATCTAGGCTTCATTaGGAATTTCCTCACCTTCCT +
Preference number: 5 (lower is better)
Translates to: TLVCHSSHCSQLFYIACVRSRLH*EFPHLP
Trigger: AGGAAGGTGAGGAAATTCCAAATGAAGCCTAGATCT...CACACAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp ACACATACACACACACACACACAAATTGACAAGGCAGCACTGCTGACAGGCTATACCCCCTACATCATTTaGATAGACACCTTGGGGCAT +
Preference number: 5 (lower is better)
Translates to: THTHTHTQIDKAALLTGYTPYII*IDTLGH
Trigger: ATGCCCCAAGGTGTCTATCAAAATGATGTAGGGGGT...ATAGCCTGTCAGCAGTGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp ACTTTAGTTTGCCACAGCTCCCACTGCTCCCAGCTGTTTTACATCGCTTGTGTGGTGGAACAATGCTCATaGCCCACTTCTGATTCATTA +
Preference number: 5 (lower is better)
Translates to: TLVCHSSHCSQLFYIACVVEQCS*PTSDSL
Trigger: TAATGAATCAGAAGTGGGCAATGAGCATTGTTCCAC...CACACAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTGGCAAACTAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS CCA 90 bp GACACGGTTACTGGTTTCTTCAATTGCTCATTAGGGCTACTGTGCTaGTGGGAAGCCTCTAGGTCCTTCACTATCTTCTTTAAACTTTCC +
Preference number: 5 (lower is better)
Translates to: DTVTGFFNCSLGLLC*WEASRSFTIFFKLS
Trigger: GGAAAGTTTAAAGAAGATAGTGAAGGACCTAGAGGCTTCCCACCAGCACAGTAGCCCTAATGAGCAATTGAAGAAACCAGTAACCGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp GTTCCATTTCAAGGACTAAGCATCAGAAGCACTCCTTATGAATTCACACACACACAGGCAGCCCAGTGTTaGTCATCTTGGCTATGTTGC +
Preference number: 5 (lower is better)
Translates to: VPFQGLSIRSTPYEFTHTQAAQC*SSWLCC
Trigger: GCAACATAGCCAAGATGACAAACACTGGGCTGCCTG...TGTGTGTGTGAATTCATAAGGAGTGCTTCTGATGCTTAGTCCTTGAAATGGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp AACTGCTTAGTGCTCAGGAGGGTTTCTCAAGGGCTCTATAAAGCTCAGCTTGTGAATGGCCATTGGTTTTaGCATATGAGTAAGCAGGAG +
Preference number: 5 (lower is better)
Translates to: NCLVLRRVSQGLYKAQLVNGHWF*HMSKQE
Trigger: CTCCTGCTTACTCATATGCAAAAACCAATGGCCATT...CACAAGCTGAGCTTTATAGAGCCCTTGAGAAACCCTCCTGAGCACTAAGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp AATTCACACACACACACACATACACACACACACACACAAATTGACAAGGCAGCATGGTTTTCTACATTGTaGCCTGCAGTCAGCTCCCTG +
Preference number: 5 (lower is better)
Translates to: NSHTHTHTHTHTQIDKAAWFSTL*PAVSSL
Trigger: CAGGGAGCTGACTGCAGGCAACAATGTAGAAAACCA...TGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp AATTCACACACACACACACATACACACACACACACACAAATTGACAAGGCAGCACTCCACTGGTTTCTCTaGGGCCAATGCCACAGATTT +
Preference number: 5 (lower is better)
Translates to: NSHTHTHTHTHTQIDKAALHWFL*GQCHRF
Trigger: AAATCTGTGGCATTGGCCCAAGAGAAACCAGTGGAG...TGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp AATTCACACACACACACACATACACACACACACACACAAATTGACAAGGCAGCATGGCTTGATTGGCCCTaGTTGGCTAGTGAATCTGGA +
Preference number: 5 (lower is better)
Translates to: NSHTHTHTHTHTQIDKAAWLDWP*LASESG
Trigger: TCCAGATTCACTAGCCAACAAGGGCCAATCAAGCCA...TGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp ACACATACACACACACACACACAAATTGACAAGGCAGCACTGCTGACAGGCTATCCAGGTTCTGGCAGCTaGGAGAATAAGTGTAACAAT +
Preference number: 5 (lower is better)
Translates to: THTHTHTQIDKAALLTGYPGSGS*ENKCNN
Trigger: ATTGTTACACTTATTCTCCAAGCTGCCAGAACCTGG...ATAGCCTGTCAGCAGTGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp ACACATACACACACACACACACAAATTGACAAGGCAGCACTGCTGACAGGCTATACACAGTTGGAAAGTTaGGAGGCTTTTGTCCGCATA +
Preference number: 5 (lower is better)
Translates to: THTHTHTQIDKAALLTGYTQLES*EAFVRI
Trigger: TATGCGGACAAAAGCCTCCAAACTTTCCAACTGTGT...ATAGCCTGTCAGCAGTGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp AACTGCTTAGTGCTCAGGAGGGTTTCTCAAGGGCTCTATAAAGCTCAGCTTGTGCATCATTACAATCTGTaGGCCAGTAACAGCTTTTGC +
Preference number: 5 (lower is better)
Translates to: NCLVLRRVSQGLYKAQLVHHYNL*ASNSFC
Trigger: GCAAAAGCTGTTACTGGCCAACAGATTGTAATGATG...CACAAGCTGAGCTTTATAGAGCCCTTGAGAAACCCTCCTGAGCACTAAGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS GCA 90 bp TTGGACACGGTTACTGGTTTCTTCAATTGCTCATTAGGGCTACTGTaGTGGTGGGAAGCCTCTAGGTCCTTCACTATCTTCTTTAAACTT +
Preference number: 5 (lower is better)
Translates to: LDTVTGFFNCSLGLL*WWEASRSFTIFFKL
Trigger: AAGTTTAAAGAAGATAGTGAAGGACCTAGAGGCTTCCCACCAGCACAGTAGCCCTAATGAGCAATTGAAGAAACCAGTAACCGTGTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp GTTCCATTTCAAGGACTAAGCATCAGAAGCACTCCTTATGAATTCACACACACAAGCTGCATGGAACCGTaGGTTGATCCCTACTTGGTA +
Preference number: 5 (lower is better)
Translates to: VPFQGLSIRSTPYEFTHTSCMEP*VDPYLV
Trigger: TACCAAGTAGGGATCAACCAACGGTTCCATGCAGCT...TGTGTGTGTGAATTCATAAGGAGTGCTTCTGATGCTTAGTCCTTGAAATGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp CCAATATACTCCATTGTGATTTATACACTGATTTCCATCACCTGCCTTTTTACTTGCTTGGCGGCAGAGTaGTCTATGAGGGTGGGGGAT +
Preference number: 5 (lower is better)
Translates to: PIYSIVIYTLISITCLFTCLAAE*SMRVGD
Trigger: ATCCCCCACCCTCATAGACAACTCTGCCGCCAAGCA...AGTAAAAAGGCAGGTGATGGAAATCAGTGTATAAATCACAATGGAGTATATTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp CCAATATACTCCATTGTGATTTATACACTGATTTCCATCACCTGCCTTTTTACTTTTCGGGCCAGCTGCTaGGCGGCAGAGTTGTCTATG +
Preference number: 5 (lower is better)
Translates to: PIYSIVIYTLISITCLFTFRASC*AAELSM
Trigger: CATAGACAACTCTGCCGCCAAGCAGCTGGCCCGAAA...AGTAAAAAGGCAGGTGATGGAAATCAGTGTATAAATCACAATGGAGTATATTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp CCACATCTAGTTGCTTCGGTAGGTAATCTTAATGTGCAGTTCTACTTGTCCTTTCTTGATTGGCCCTTGTaGGCTAGTGAATCTGGAGAG +
Preference number: 5 (lower is better)
Translates to: PHLVASVGNLNVQFYLSFLDWPL*ASESGE
Trigger: CTCTCCAGATTCACTAGCCAACAAGGGCCAATCAAG...AAAGGACAAGTAGAACTGCACATTAAGATTACCTACCGAAGCAACTAGATGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp TCATTTGTTTTGTCAAAGCCACAGTCAAGTGCTCCCTCTACACCACCCCCTCTTCAACATCCTTACCATTaGCTACAACAGTATTGGAAG +
Preference number: 5 (lower is better)
Translates to: SFVLSKPQSSAPSTPPPLQHPYH*LQQYWK
Trigger: CTTCCAATACTGTTGTAGCAAATGGTAAGGATGTTG...AAGAGGGGGTGGTGTAGAGGGAGCACTTGACTGTGGCTTTGACAAAACAAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp CCACATCTAGTTGCTTCGGTAGGTAATCTTAATGTGCAGTTCTACTTGTCCTTTTTGATGAGGCTGGTCTaGAACACCTGGTCTCAAGAG +
Preference number: 5 (lower is better)
Translates to: PHLVASVGNLNVQFYLSFLMRLV*NTWSQE
Trigger: CTCTTGAGACCAGGTGTTCAAGACCAGCCTCATCAA...AAAGGACAAGTAGAACTGCACATTAAGATTACCTACCGAAGCAACTAGATGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp CAGCAAGCAGATGGAGCTGAACAGATGCCCTTTTTAAATGCGGCTTGGGCACTTTCAACACTATTCGTTTaGGCTCTGCATAGGAATAAA +
Preference number: 5 (lower is better)
Translates to: QQADGAEQMPFLNAAWALSTLFV*ALHRNK
Trigger: TTTATTCCTATGCAGAGCCAAAACGAATAGTGTTGA...AAGTGCCCAAGCCGCATTTAAAAAGGGCATCTGTTCAGCTCCATCTGCTTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp AACTGCTTAGTGCTCAGGAGGGTTTCTCAAGGGCTCTATAAAGCTCAGCTTGTGTACCTAACTGGGTTATaGGATCCATTGCAAGATTGT +
Preference number: 5 (lower is better)
Translates to: NCLVLRRVSQGLYKAQLVYLTGL*DPLQDC
Trigger: ACAATCTTGCAATGGATCCAATAACCCAGTTAGGTA...CACAAGCTGAGCTTTATAGAGCCCTTGAGAAACCCTCCTGAGCACTAAGCAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp TCATTTGTTTTGTCAAAGCCACAGTCAAGTGCTCCCTCTACACCACCCCCTCTTAACCTGGATGGGTCATaGACTTCATTTGTTTTGTCA +
Preference number: 5 (lower is better)
Translates to: SFVLSKPQSSAPSTPPPLNLDGS*TSFVLS
Trigger: TGACAAAACAAATGAAGTCAATGACCCATCCAGGTT...AAGAGGGGGTGGTGTAGAGGGAGCACTTGACTGTGGCTTTGACAAAACAAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS CCA 90 bp ACGGTTACTGGTTTCTTCAATTGCTCATTAGGGCTACTGTGCTGGTaGGAAGCCTCTAGGTCCTTCACTATCTTCTTTAAACTTTCCATT +
Preference number: 5 (lower is better)
Translates to: TVTGFFNCSLGLLCW*EASRSFTIFFKLSI
Trigger: AATGGAAAGTTTAAAGAAGATAGTGAAGGACCTAGAGGCTTCCCACCAGCACAGTAGCCCTAATGAGCAATTGAAGAAACCAGTAACCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp CTCCAGTTTAGAAAGTTTAGCTATTTTATCAACACTATTCGTTTTGGCTCTGCATCTTCTTTCAGGGTTTaGGTCCGGTTCTCTTCTCGG +
Preference number: 5 (lower is better)
Translates to: LQFRKFSYFINTIRFGSASSFRV*VRFSSR
Trigger: CCGAGAAGAGAACCGGACCAAAACCCTGAAAGAAGA...TGCAGAGCCAAAACGAATAGTGTTGATAAAATAGCTAAACTTTCTAAACTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp CCAATATACTCCATTGTGATTTATACACTGATTTCCATCACCTGCCTTTTTACTCAGCTCCCTGGTAGTTaGTATCTCTGGGTCACAATG +
Preference number: 5 (lower is better)
Translates to: PIYSIVIYTLISITCLFTQLPGS*YLWVTM
Trigger: CATTGTGACCCAGAGATACAAACTACCAGGGAGCTG...AGTAAAAAGGCAGGTGATGGAAATCAGTGTATAAATCACAATGGAGTATATTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp CTCCAGTTTAGAAAGTTTAGCTATTTTATCAACACTATTCGTTTTGGCTCTGCATTGCATTTGCTAACATaGCAGCAGCAACAGCGCTGG +
Preference number: 5 (lower is better)
Translates to: LQFRKFSYFINTIRFGSALHLLT*QQQQRW
Trigger: CCAGCGCTGTTGCTGCTGCAATGTTAGCAAATGCAA...TGCAGAGCCAAAACGAATAGTGTTGATAAAATAGCTAAACTTTCTAAACTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp CCAATATACTCCATTGTGATTTATACACTGATTTCCATCACCTGCCTTTTTACTGTCAGGAGTTCAGGCTaGCTGAGTTTTTCCAGATTC +
Preference number: 5 (lower is better)
Translates to: PIYSIVIYTLISITCLFTVRSSG*LSFSRF
Trigger: GAATCTGGAAAAACTCAGCAAGCCTGAACTCCTGAC...AGTAAAAAGGCAGGTGATGGAAATCAGTGTATAAATCACAATGGAGTATATTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp CCAATATACTCCATTGTGATTTATACACTGATTTCCATCACCTGCCTTTTTACTGTGTCACCTCTTGGATaGGCAGTGTTGGCTAGATTT +
Preference number: 5 (lower is better)
Translates to: PIYSIVIYTLISITCLFTVSPLG*AVLARF
Trigger: AAATCTAGCCAACACTGCCAATCCAAGAGGTGACAC...AGTAAAAAGGCAGGTGATGGAAATCAGTGTATAAATCACAATGGAGTATATTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp AATTCACACACACACACACATACACACACACACACACAAATTGACAAGGCAGCAAATGTGCAGTTCTACTaGTCCTTTATGCTATATTGC +
Preference number: 5 (lower is better)
Translates to: NSHTHTHTHTHTQIDKAANVQFY*SFMLYC
Trigger: GCAATATAGCATAAAGGACAAGTAGAACTGCACATT...TGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp AATTCACACACACACACACATACACACACACACACACAAATTGACAAGGCAGCAGGATCCATTGCAAGATaGTGCTTATTTATCTCAGAA +
Preference number: 5 (lower is better)
Translates to: NSHTHTHTHTHTQIDKAAGSIAR*CLFISE
Trigger: TTCTGAGATAAATAAGCACAATCTTGCAATGGATCC...TGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp CCAATATACTCCATTGTGATTTATACACTGATTTCCATCACCTGCCTTTTTACTATGGCTTCAGGGTCTTaGGATCCTATGAAGCCATCA +
Preference number: 5 (lower is better)
Translates to: PIYSIVIYTLISITCLFTMASGS*DPMKPS
Trigger: TGATGGCTTCATAGGATCCAAAGACCCTGAAGCCAT...AGTAAAAAGGCAGGTGATGGAAATCAGTGTATAAATCACAATGGAGTATATTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp GTAACCATTTCCTATTCAAGTAACAGCAATCAGAATCAGAAGTTCCTTACACAACTCTCTGGCTTGCATTaGCTAACATTGCAGCAGCAA +
Preference number: 5 (lower is better)
Translates to: VTISYSSNSNQNQKFLTQLSGLH*LTLQQQ
Trigger: TTGCTGCTGCAATGTTAGCAAATGCAAGCCAGAGAG...TTGTGTAAGGAACTTCTGATTCTGATTGCTGTTACTTGAATAGGAAATGGTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp GTAACCATTTCCTATTCAAGTAACAGCAATCAGAATCAGAAGTTCCTTACACAAGAAAGAGGTTGCAACTaGGCAGCTTGCAAGCTAAAT +
Preference number: 5 (lower is better)
Translates to: VTISYSSNSNQNQKFLTQERGCN*AACKLN
Trigger: ATTTAGCTTGCAAGCTGCCAAGTTGCAACCTCTTTC...TTGTGTAAGGAACTTCTGATTCTGATTGCTGTTACTTGAATAGGAAATGGTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp CCACATCTAGTTGCTTCGGTAGGTAATCTTAATGTGCAGTTCTACTTGTCCTTTTTGACTTCATTTGTTTaGTCAAAGCCACAGTCAAGT +
Preference number: 5 (lower is better)
Translates to: PHLVASVGNLNVQFYLSFLTSFV*SKPQSS
Trigger: ACTTGACTGTGGCTTTGACAAAACAAATGAAGTCAA...AAAGGACAAGTAGAACTGCACATTAAGATTACCTACCGAAGCAACTAGATGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS TCA 90 bp AGGAGTTCAGGCTTGCTGAGTTTTTCCAGATTCATCTTGAAAGCCTaGAACAAAGGTAACAATCAGACAATCTCCAAAGACATAGTTAAT +
Preference number: 5 (lower is better)
Translates to: RSSGLLSFSRFILKA*NKGNNQTISKDIVN
Trigger: ATTAACTATGTCTTTGGAGATTGTCTGATTGTTACCTTTGTTTCAGGCTTTCAAGATGAATCTGGAAAAACTCAGCAAGCCTGAACTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502356.3
CDS-3UTR CAA 90 bp CTCCAGTTTAGAAAGTTTAGCTATTTTATCAACACTATTCGTTTTGGCTCTGCATTCAAATTCCAACTGTaGAGTCAGCCTCTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: LQFRKFSYFINTIRFGSAFKFQL*SQPLSF
Trigger: GAAAGAGAGAGGCTGACTCAACAGTTGGAATTTGAA...TGCAGAGCCAAAACGAATAGTGTTGATAAAATAGCTAAACTTTCTAAACTGGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS-3UTR CAA 90 bp GTAACCATTTCCTATTCAAGTAACAGCAATCAGAATCAGAAGTTCCTTACACAAGGGTTATTGGATCCATaGCAAGATTGTGCTTATTTA +
Preference number: 5 (lower is better)
Translates to: VTISYSSNSNQNQKFLTQGLLDP*QDCAYL
Trigger: TAAATAAGCACAATCTTGCAATGGATCCAATAACCC...TTGTGTAAGGAACTTCTGATTCTGATTGCTGTTACTTGAATAGGAAATGGTTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS CCA 72 bp TGGGAGACAGTGAGCTCCCACTGGAAGAGAGGGGACTaGGCATTGGGACTGGAGTCTCAATCCCCACAGGAC +
Preference number: 6 (lower is better)
Translates to: WETVSSHWKRGD*ALGLESQSPQD
Trigger: GTCCTGTGGGGATTGAGACTCCAGTCCCAATGCCCAGTCCCCTCTCTTCCAGTGGGAGCTCACTGTCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS CCA 72 bp AGAAGGGGTGAGGCCAGGTTTCTTGGGTGGGATGGGTaGAGGGTTTCCTCTCTCAGCTCTGGGGATGGTTGG +
Preference number: 6 (lower is better)
Translates to: RRGEARFLGWDG*RVSSLSSGDGW
Trigger: CCAACCATCCCCAGAGCTGAGAGAGGAAACCCTCCACCCATCCCACCCAAGAAACCTGGCCTCACCCCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000271277.11
ENST00000607039.1
CDS CCA 72 bp AGCAGATGGAGAAGGGGTGAGGCCAGGTTTCTTGGGTaGGATGGGTGGAGGGTTTCCTCTCTCAGCTCTGGG +
Preference number: 6 (lower is better)
Translates to: SRWRRGEARFLG*DGWRVSSLSSG
Trigger: CCCAGAGCTGAGAGAGGAAACCCTCCACCCATCCCACCCAAGAAACCTGGCCTCACCCCTTCTCCATCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271277.11
ENST00000607039.1
CDS TCA 72 bp TGTTTCGGGCCAGCTGCTTGGCGGCAGAGTTGTCTATaGGGGTGGGGGATAAATCCCTGGATGGAGGGCTCT +
Preference number: 6 (lower is better)
Translates to: CFGPAAWRQSCL*GWGINPWMEGS
Trigger: AGAGCCCTCCATCCAGGGATTTATCCCCCACCCTCATAGACAACTCTGCCGCCAAGCAGCTGGCCCGAAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000271277.11
ENST00000607039.1
CDS CAA 72 bp GTGGTAGCAGATGGAGAAGGGGTGAGGCCAGGTTTCTaGGGTGGGATGGGTGGAGGGTTTCCTCTCTCAGCT +
Preference number: 6 (lower is better)
Translates to: VVADGEGVRPGF*GGMGGGFPLSA
Trigger: AGCTGAGAGAGGAAACCCTCCACCCATCCCACCCAAGAAACCTGGCCTCACCCCTTCTCCATCTGCTACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271277.11
ENST00000607039.1
CDS CCA 72 bp CCCACAGGACACCCACCATTCTCCACTGGTTTCTCTTaGGCCAATGCCACAGATTTTTCCCGTGGAGGCACC +
Preference number: 6 (lower is better)
Translates to: PTGHPPFSTGFS*ANATDFSRGGT
Trigger: GGTGCCTCCACGGGAAAAATCTGTGGCATTGGCCCAAGAGAAACCAGTGGAGAATGGTGGGTGTCCTGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS CAA 72 bp CCCCACAGGACACCCACCATTCTCCACTGGTTTCTCTaGGGCCAATGCCACAGATTTTTCCCGTGGAGGCAC +
Preference number: 6 (lower is better)
Translates to: PHRTPTILHWFL*GQCHRFFPWRH
Trigger: GTGCCTCCACGGGAAAAATCTGTGGCATTGGCCCAAGAGAAACCAGTGGAGAATGGTGGGTGTCCTGTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS CAA 72 bp GTGACTGTGTTTCGGGCCAGCTGCTTGGCGGCAGAGTaGTCTATGAGGGTGGGGGATAAATCCCTGGATGGA +
Preference number: 6 (lower is better)
Translates to: VTVFRASCLAAE*SMRVGDKSLDG
Trigger: TCCATCCAGGGATTTATCCCCCACCCTCATAGACAACTCTGCCGCCAAGCAGCTGGCCCGAAACACAGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271277.11
ENST00000607039.1
CDS CAA 90 bp GCCAAAGGGAGAGCTGTTGGGAGAGACTGGCTTGATTGGCCCTTGTaGGCTAGTGAATCTGGAGAGCACCTGAGTGACTGTGTTTCGGGC +
Preference number: 6 (lower is better)
Translates to: AKGRAVGRDWLDWPL*ASESGEHLSDCVSG
Trigger: GCCCGAAACACAGTCACTCAGGTGCTCTCCAGATTCACTAGCCAACAAGGGCCAATCAAGCCAGTCTCTCCCAACAGCTCTCCCTTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271277.11
ENST00000607039.1
CDS CCA 72 bp CCTTGTTGGTGGCTTTCTTGCACTCAAGCACTAGCATaGATGAGAGCTGCTTGTGGCGGGAGCGCTCCTCTT +
Preference number: 6 (lower is better)
Translates to: PCWWLSCTQALA*MRAACGGSAPL
Trigger: AAGAGGAGCGCTCCCGCCACAAGCAGCTCTCATCCATGCTAGTGCTTGAGTGCAAGAAAGCCACCAACAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271277.11
ENST00000441739.1
CDS CCA 72 bp GCCAAAGGGAGAGCTGTTGGGAGAGACTGGCTTGATTaGCCCTTGTTGGCTAGTGAATCTGGAGAGCACCTG +
Preference number: 6 (lower is better)
Translates to: AKGRAVGRDWLD*PLLASESGEHL
Trigger: CAGGTGCTCTCCAGATTCACTAGCCAACAAGGGCCAATCAAGCCAGTCTCTCCCAACAGCTCTCCCTTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271277.11
ENST00000607039.1
CDS CAA 72 bp GGGAGAGCTGTTGGGAGAGACTGGCTTGATTGGCCCTaGTTGGCTAGTGAATCTGGAGAGCACCTGAGTGAC +
Preference number: 6 (lower is better)
Translates to: GRAVGRDWLDWP*LASESGEHLSD
Trigger: GTCACTCAGGTGCTCTCCAGATTCACTAGCCAACAAGGGCCAATCAAGCCAGTCTCTCCCAACAGCTCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271277.11
ENST00000607039.1
CDS GCA 72 bp TTTAAAATGCCATTAGCATGGTGGAAATGTGTCCAATaGTTTCCACGACGCTCCGGGCTCCGCTCCCCTCCG +
Preference number: 6 (lower is better)
Translates to: FKMPLAWWKCVQ*FPRRSGLRSPP
Trigger: CGGAGGGGAGCGGAGCCCGGAGCGTCGTGGAAAGCATTGGACACATTTCCACCATGCTAATGGCATTTTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS CCA 72 bp CTCCTGCCTTCTGTCCTTCCTCGGCTGCCTTGTTGGTaGCTTTCTTGCACTCAAGCACTAGCATGGATGAGA +
Preference number: 6 (lower is better)
Translates to: LLPSVLPRLPCW*LSCTQALAWMR
Trigger: TCTCATCCATGCTAGTGCTTGAGTGCAAGAAAGCCACCAACAAGGCAGCCGAGGAAGGACAGAAGGCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271277.11
ENST00000441739.1
CDS CCA 72 bp GAGTGGCAGGACCAGGCAGCCCAGTGTTTGTCATCTTaGCTATGTTGCTCCCATGGGTTCTTTCTGCTGGAA +
Preference number: 6 (lower is better)
Translates to: EWQDQAAQCLSS*LCCSHGFFLLE
Trigger: TTCCAGCAGAAAGAACCCATGGGAGCAACATAGCCAAGATGACAAACACTGGGCTGCCTGGTCCTGCCACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS CCA 72 bp TGGGCCAATGCCACAGATTTTTCCCGTGGAGGCACCTaGTTTTCTACATTGTTGCCTGCAGTCAGCTCCCTG +
Preference number: 6 (lower is better)
Translates to: WANATDFSRGGT*FSTLLPAVSSL
Trigger: CAGGGAGCTGACTGCAGGCAACAATGTAGAAAACCAGGTGCCTCCACGGGAAAAATCTGTGGCATTGGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS CCA 72 bp CTCAGGGGACTGGACACTTTCCCTGGAGTAGGTGAATaGCTTGTGTCACCTCTTGGATTGGCAGTGTTGGCT +
Preference number: 6 (lower is better)
Translates to: LRGLDTFPGVGE*LVSPLGLAVLA
Trigger: AGCCAACACTGCCAATCCAAGAGGTGACACAAGCCATTCACCTACTCCAGGGAAAGTGTCCAGTCCCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271277.11
ENST00000607039.1
CDS CCA 72 bp GTGTCTGTCAGTCTCCCTGAAACAGAACTCACCTCTTaGGGACGTCTTGTGCCTCCGTCTCTGACCTTATCC +
Preference number: 6 (lower is better)
Translates to: VSVSLPETELTS*GRLVPPSLTLS
Trigger: GGATAAGGTCAGAGACGGAGGCACAAGACGTCCCCAAGAGGTGAGTTCTGTTTCAGGGAGACTGACAGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607039.1
CDS CAA 90 bp TGTGCCAAAGGGAGAGCTGTTGGGAGAGACTGGCTTGATTGGCCCTaGTTGGCTAGTGAATCTGGAGAGCACCTGAGTGACTGTGTTTCG +
Preference number: 6 (lower is better)
Translates to: CAKGRAVGRDWLDWP*LASESGEHLSDCVS
Trigger: CGAAACACAGTCACTCAGGTGCTCTCCAGATTCACTAGCCAACAAGGGCCAATCAAGCCAGTCTCTCCCAACAGCTCTCCCTTTGGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271277.11
ENST00000607039.1
CDS TCA 72 bp ACTGAAATTTGTGGCGAGCTGCATGGAACCGTTGGTTaGTCCCTACTTGGTACGATGACTGGTAGCCAGGGC +
Preference number: 6 (lower is better)
Translates to: TEICGELHGTVG*SLLGTMTGSQG
Trigger: GCCCTGGCTACCAGTCATCGTACCAAGTAGGGATCAACCAACGGTTCCATGCAGCTCGCCACAAATTTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271277.11
ENST00000607039.1
CDS TCA 72 bp TTGAAGAAAGCACCCACTGGTGTCTGTCAGTCTCCCTaGAACAGAACTCACCTCTTGGGGACGTCTTGTGCC +
Preference number: 6 (lower is better)
Translates to: LKKAPTGVCQSP*NRTHLLGTSCA
Trigger: GGCACAAGACGTCCCCAAGAGGTGAGTTCTGTTTCAGGGAGACTGACAGACACCAGTGGGTGCTTTCTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607039.1
CDS GCA 72 bp TCTGTCCTTCCTCGGCTGCCTTGTTGGTGGCTTTCTTaGACTCAAGCACTAGCATGGATGAGAGCTGCTTGT +
Preference number: 6 (lower is better)
Translates to: SVLPRLPCWWLS*TQALAWMRAAC
Trigger: ACAAGCAGCTCTCATCCATGCTAGTGCTTGAGTGCAAGAAAGCCACCAACAAGGCAGCCGAGGAAGGACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271277.11
ENST00000441739.1
CDS GCA 72 bp ACACCCACCATTCTCCACTGGTTTCTCTTGGGCCAATaGCACAGATTTTTCCCGTGGAGGCACCTGGTTTTC +
Preference number: 6 (lower is better)
Translates to: TPTILHWFLLGQ*HRFFPWRHLVF
Trigger: GAAAACCAGGTGCCTCCACGGGAAAAATCTGTGGCATTGGCCCAAGAGAAACCAGTGGAGAATGGTGGGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS CCA 72 bp AGTCTCAATCCCCACAGGACACCCACCATTCTCCACTaGTTTCTCTTGGGCCAATGCCACAGATTTTTCCCG +
Preference number: 6 (lower is better)
Translates to: SLNPHRTPTILH*FLLGQCHRFFP
Trigger: CGGGAAAAATCTGTGGCATTGGCCCAAGAGAAACCAGTGGAGAATGGTGGGTGTCCTGTGGGGATTGAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS CCA 72 bp GGGATAAATCCCTGGATGGAGGGCTCTGTAGGCCACTaGCTTGTTGGTCCTGATCTGCTTGGGACTGAAATT +
Preference number: 6 (lower is better)
Translates to: GINPWMEGSVGH*LVGPDLLGTEI
Trigger: AATTTCAGTCCCAAGCAGATCAGGACCAACAAGCCAGTGGCCTACAGAGCCCTCCATCCAGGGATTTATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271277.11
ENST00000607039.1
CDS CCA 72 bp CTTAGGTCAGCCCCAACCCTTGAAGAAAGCACCCACTaGTGTCTGTCAGTCTCCCTGAAACAGAACTCACCT +
Preference number: 6 (lower is better)
Translates to: LRSAPTLEESTH*CLSVSLKQNSP
Trigger: AGGTGAGTTCTGTTTCAGGGAGACTGACAGACACCAGTGGGTGCTTTCTTCAAGGGTTGGGGCTGACCTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607039.1
CDS CAA 72 bp TTCTGTCCTTCCTCGGCTGCCTTGTTGGTGGCTTTCTaGCACTCAAGCACTAGCATGGATGAGAGCTGCTTG +
Preference number: 6 (lower is better)
Translates to: FCPSSAALLVAF*HSSTSMDESCL
Trigger: CAAGCAGCTCTCATCCATGCTAGTGCTTGAGTGCAAGAAAGCCACCAACAAGGCAGCCGAGGAAGGACAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271277.11
ENST00000441739.1
CDS CAA 72 bp AGAGCTGTTGGGAGAGACTGGCTTGATTGGCCCTTGTaGGCTAGTGAATCTGGAGAGCACCTGAGTGACTGT +
Preference number: 6 (lower is better)
Translates to: RAVGRDWLDWPL*ASESGEHLSDC
Trigger: ACAGTCACTCAGGTGCTCTCCAGATTCACTAGCCAACAAGGGCCAATCAAGCCAGTCTCTCCCAACAGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271277.11
ENST00000607039.1
CDS CAA 90 bp GCCAATGCCACAGATTTTTCCCGTGGAGGCACCTGGTTTTCTACATaGTTGCCTGCAGTCAGCTCCCTGGTAGTTTGTATCTCTGGGTCA +
Preference number: 6 (lower is better)
Translates to: ANATDFSRGGTWFST*LPAVSSLVVCISGS
Trigger: TGACCCAGAGATACAAACTACCAGGGAGCTGACTGCAGGCAACAATGTAGAAAACCAGGTGCCTCCACGGGAAAAATCTGTGGCATTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS GCA 72 bp GACCAGGCAGCCCAGTGTTTGTCATCTTGGCTATGTTaGTCCCATGGGTTCTTTCTGCTGGAAAACTCTCTG +
Preference number: 6 (lower is better)
Translates to: DQAAQCLSSWLC*SHGFFLLENSL
Trigger: CAGAGAGTTTTCCAGCAGAAAGAACCCATGGGAGCAACATAGCCAAGATGACAAACACTGGGCTGCCTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS GCA 72 bp GTGGTGTGGACAGAGCCACATGTTGTATGCTCCTTGTaGTCCTCCAGTCTAACAGTGAAACAAACGCTGCCA +
Preference number: 6 (lower is better)
Translates to: VVWTEPHVVCSL*SSSLTVKQTLP
Trigger: TGGCAGCGTTTGTTTCACTGTTAGACTGGAGGAGCACAAGGAGCATACAACATGTGGCTCTGTCCACACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607039.1
CDS CCA 72 bp CCTACAAATTATTGGACAGTGTATTGCAGAATGCTGTaGCCTGGGAGCTCCTTCTTAGGTCAGCCCCAACCC +
Preference number: 6 (lower is better)
Translates to: PTNYWTVYCRML*PGSSFLGQPQP
Trigger: GGGTTGGGGCTGACCTAAGAAGGAGCTCCCAGGCCACAGCATTCTGCAATACACTGTCCAATAATTTGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607039.1
CDS CAA 72 bp GCAGCCAGCTGGGACAGCATGCGCTCCTGCATGTTCTaGCACTGCTTCATCACAACCTTAAGAATAGAGAGT +
Preference number: 6 (lower is better)
Translates to: AASWDSMRSCMF*HCFITTLRIES
Trigger: ACTCTCTATTCTTAAGGTTGTGATGAAGCAGTGCAAGAACATGCAGGAGCGCATGCTGTCCCAGCTGGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271277.11
ENST00000441739.1
CDS CAA 72 bp GGACCAGGCAGCCCAGTGTTTGTCATCTTGGCTATGTaGCTCCCATGGGTTCTTTCTGCTGGAAAACTCTCT +
Preference number: 6 (lower is better)
Translates to: GPGSPVFVILAM*LPWVLSAGKLS
Trigger: AGAGAGTTTTCCAGCAGAAAGAACCCATGGGAGCAACATAGCCAAGATGACAAACACTGGGCTGCCTGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS TCA 72 bp GAGAGCTGCTTGTGGCGGGAGCGCTCCTCTTCCAGCTaGCTAGAGAGCTTCTTCTGTTCTTTTTCAAACTTT +
Preference number: 6 (lower is better)
Translates to: ESCLWRERSSSS*LESFFCSFSNF
Trigger: AAAGTTTGAAAAAGAACAGAAGAAGCTCTCTAGTCAGCTGGAAGAGGAGCGCTCCCGCCACAAGCAGCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000271277.11
ENST00000441739.1
CDS GCA 72 bp CCTTACCATTTGCTACAACAGTATTGGAAGAGCAGCTaGTGGCAAGGTCTTCTGCAGTGGTCAAAGAGGCTG +
Preference number: 6 (lower is better)
Translates to: PYHLLQQYWKSS*WQGLLQWSKRL
Trigger: CAGCCTCTTTGACCACTGCAGAAGACCTTGCCAGCAGCTGCTCTTCCAATACTGTTGTAGCAAATGGTAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS CCA 72 bp GAGAGGCTCAGTTGCTGTGCCTTTGGACACGGTTACTaGTTTCTTCAATTGCTCATTAGGGCTACTGTGCTG +
Preference number: 6 (lower is better)
Translates to: ERLSCCAFGHGY*FLQLLIRATVL
Trigger: CAGCACAGTAGCCCTAATGAGCAATTGAAGAAACCAGTAACCGTGTCCAAAGGCACAGCAACTGAGCCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS CCA 72 bp AATGGCCATTGGTTTTTGCATATGAGTAAGCAGGAGTaGCAGGACCAGGCAGCCCAGTGTTTGTCATCTTGG +
Preference number: 6 (lower is better)
Translates to: NGHWFLHMSKQE*QDQAAQCLSSW
Trigger: CCAAGATGACAAACACTGGGCTGCCTGGTCCTGCCACTCCTGCTTACTCATATGCAAAAACCAATGGCCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS CCA 72 bp TGGTTTCTCTTGGGCCAATGCCACAGATTTTTCCCGTaGAGGCACCTGGTTTTCTACATTGTTGCCTGCAGT +
Preference number: 6 (lower is better)
Translates to: WFLLGQCHRFFP*RHLVFYIVACS
Trigger: ACTGCAGGCAACAATGTAGAAAACCAGGTGCCTCCACGGGAAAAATCTGTGGCATTGGCCCAAGAGAAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS CCA 72 bp GTGAATGGCTTGTGTCACCTCTTGGATTGGCAGTGTTaGCTAGATTTCGATAGTCTGTGCCAAAGGGAGAGC +
Preference number: 6 (lower is better)
Translates to: VNGLCHLLDWQC*LDFDSLCQRES
Trigger: GCTCTCCCTTTGGCACAGACTATCGAAATCTAGCCAACACTGCCAATCCAAGAGGTGACACAAGCCATTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271277.11
ENST00000607039.1
CDS CCA 72 bp TACCATTTGCTACAACAGTATTGGAAGAGCAGCTGCTaGCAAGGTCTTCTGCAGTGGTCAAAGAGGCTGCCT +
Preference number: 6 (lower is better)
Translates to: YHLLQQYWKSSC*QGLLQWSKRLP
Trigger: AGGCAGCCTCTTTGACCACTGCAGAAGACCTTGCCAGCAGCTGCTCTTCCAATACTGTTGTAGCAAATGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS CCA 72 bp ATCCATTTGCTACAACAGTATTGGAAGAGCAGCTGCTaGCAAGGTCTTCTGCAGTGGTCAAAGAGGCTGCCT +
Preference number: 6 (lower is better)
Translates to: IHLLQQYWKSSC*QGLLQWSKRLP
Trigger: AGGCAGCCTCTTTGACCACTGCAGAAGACCTTGCCAGCAGCTGCTCTTCCAATACTGTTGTAGCAAATGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607039.1
CDS CCA 72 bp TCCGTCTCTGACCTTATCCATTTGCTACAACAGTATTaGAAGAGCAGCTGCTGGCAAGGTCTTCTGCAGTGG +
Preference number: 6 (lower is better)
Translates to: SVSDLIHLLQQY*KSSCWQGLLQW
Trigger: CCACTGCAGAAGACCTTGCCAGCAGCTGCTCTTCCAATACTGTTGTAGCAAATGGATAAGGTCAGAGACGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607039.1
CDS CAA 72 bp ACAGTGGTGTGGACAGAGCCACATGTTGTATGCTCCTaGTGCTCCTCCAGTCTAACAGTGAAACAAACGCTG +
Preference number: 6 (lower is better)
Translates to: TVVWTEPHVVCS*CSSSLTVKQTL
Trigger: CAGCGTTTGTTTCACTGTTAGACTGGAGGAGCACAAGGAGCATACAACATGTGGCTCTGTCCACACCACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607039.1
CDS CAA 90 bp AATGCCACAGATTTTTCCCGTGGAGGCACCTGGTTTTCTACATTGTaGCCTGCAGTCAGCTCCCTGGTAGTTTGTATCTCTGGGTCACAA +
Preference number: 6 (lower is better)
Translates to: NATDFSRGGTWFSTL*PAVSSLVVCISGSQ
Trigger: TTGTGACCCAGAGATACAAACTACCAGGGAGCTGACTGCAGGCAACAATGTAGAAAACCAGGTGCCTCCACGGGAAAAATCTGTGGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS CAA 90 bp TCCTTGTGCTCCTCCAGTCTAACAGTGAAACAAACGCTGCCACTATaGGGAGAAGCTGCTGTCACATCCTTCGGAAGAAATAAGTCCCCT +
Preference number: 6 (lower is better)
Translates to: SLCSSSLTVKQTLPL*GEAAVTSFGRNKSP
Trigger: AGGGGACTTATTTCTTCCGAAGGATGTGACAGCAGCTTCTCCCAATAGTGGCAGCGTTTGTTTCACTGTTAGACTGGAGGAGCACAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607039.1
CDS GCA 72 bp CTTATCCATTTGCTACAACAGTATTGGAAGAGCAGCTaGTGGCAAGGTCTTCTGCAGTGGTCAAAGAGGCTG +
Preference number: 6 (lower is better)
Translates to: LIHLLQQYWKSS*WQGLLQWSKRL
Trigger: CAGCCTCTTTGACCACTGCAGAAGACCTTGCCAGCAGCTGCTCTTCCAATACTGTTGTAGCAAATGGATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607039.1
CDS CCA 72 bp AAATTATTGGACAGTGTATTGCAGAATGCTGTGGCCTaGGAGCTCCTTCTTAGGTCAGCCCCAACCCTTGAA +
Preference number: 6 (lower is better)
Translates to: KLLDSVLQNAVA*ELLLRSAPTLE
Trigger: TTCAAGGGTTGGGGCTGACCTAAGAAGGAGCTCCCAGGCCACAGCATTCTGCAATACACTGTCCAATAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607039.1
CDS CAA 72 bp GATTTTTCCCGTGGAGGCACCTGGTTTTCTACATTGTaGCCTGCAGTCAGCTCCCTGGTAGTTTGTATCTCT +
Preference number: 6 (lower is better)
Translates to: DFSRGGTWFSTL*PAVSSLVVCIS
Trigger: AGAGATACAAACTACCAGGGAGCTGACTGCAGGCAACAATGTAGAAAACCAGGTGCCTCCACGGGAAAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS CAA 90 bp AACAACTTCACAGTGGTGTGGACAGAGCCACATGTTGTATGCTCCTaGTGCTCCTCCAGTCTAACAGTGAAACAAACGCTGCCACTATTG +
Preference number: 6 (lower is better)
Translates to: NNFTVVWTEPHVVCS*CSSSLTVKQTLPLL
Trigger: CAATAGTGGCAGCGTTTGTTTCACTGTTAGACTGGAGGAGCACAAGGAGCATACAACATGTGGCTCTGTCCACACCACTGTGAAGTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607039.1
CDS CAA 90 bp TGGCAAAACACAGACATTAGCATGAGAGGCTCAGTTGCTGTGCCTTaGGACACGGTTACTGGTTTCTTCAATTGCTCATTAGGGCTACTG +
Preference number: 6 (lower is better)
Translates to: WQNTDISMRGSVAVP*DTVTGFFNCSLGLL
Trigger: CAGTAGCCCTAATGAGCAATTGAAGAAACCAGTAACCGTGTCCAAAGGCACAGCAACTGAGCCTCTCATGCTAATGTCTGTGTTTTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS TCA 72 bp GTGTCAGCCACCATGCCCAGTCTTTGTATTAATATATaGGCTGTCCAGGGAAGGAGCTGTGACTTTGGTCAA +
Preference number: 6 (lower is better)
Translates to: VSATMPSLCINI*AVQGRSCDFGQ
Trigger: TTGACCAAAGTCACAGCTCCTTCCCTGGACAGCTCATATATTAATACAAAGACTGGGCATGGTGGCTGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607039.1
CDS GCA 72 bp AGCTGGGACAGCATGCGCTCCTGCATGTTCTTGCACTaGTTCATCACAACCTTAAGAATAGAGAGTGGATTT +
Preference number: 6 (lower is better)
Translates to: SWDSMRSCMFLH*FITTLRIESGF
Trigger: AAATCCACTCTCTATTCTTAAGGTTGTGATGAAGCAGTGCAAGAACATGCAGGAGCGCATGCTGTCCCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000271277.11
ENST00000441739.1
CDS GCA 72 bp GTTACTGGTTTCTTCAATTGCTCATTAGGGCTACTGTaGTGGTGGGAAGCCTCTAGGTCCTTCACTATCTTC +
Preference number: 6 (lower is better)
Translates to: VTGFFNCSLGLL*WWEASRSFTIF
Trigger: GAAGATAGTGAAGGACCTAGAGGCTTCCCACCAGCACAGTAGCCCTAATGAGCAATTGAAGAAACCAGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS GCA 72 bp AACTTCACAGTGGTGTGGACAGAGCCACATGTTGTATaGTCCTTGTGCTCCTCCAGTCTAACAGTGAAACAA +
Preference number: 6 (lower is better)
Translates to: NFTVVWTEPHVV*SLCSSSLTVKQ
Trigger: TTGTTTCACTGTTAGACTGGAGGAGCACAAGGAGCATACAACATGTGGCTCTGTCCACACCACTGTGAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607039.1
CDS CCA 72 bp AGCCCAGTGTTTGTCATCTTGGCTATGTTGCTCCCATaGGTTCTTTCTGCTGGAAAACTCTCTGTTTGGCAA +
Preference number: 6 (lower is better)
Translates to: SPVFVILAMLLP*VLSAGKLSVWQ
Trigger: TTGCCAAACAGAGAGTTTTCCAGCAGAAAGAACCCATGGGAGCAACATAGCCAAGATGACAAACACTGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS CCA 72 bp GTAACTCAACATCCTTACCATTTGCTACAACAGTATTaGAAGAGCAGCTGCTGGCAAGGTCTTCTGCAGTGG +
Preference number: 6 (lower is better)
Translates to: VTQHPYHLLQQY*KSSCWQGLLQW
Trigger: CCACTGCAGAAGACCTTGCCAGCAGCTGCTCTTCCAATACTGTTGTAGCAAATGGTAAGGATGTTGAGTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS CAA 72 bp TCAGGGTTTTGGTCCGGTTCTCTTCTCGGTTCAGTTTaGCTCTCAGTTGTTCCCTTTCGATGTCAAACTCTG +
Preference number: 6 (lower is better)
Translates to: SGFWSGSLLGSV*LSVVPFRCQTL
Trigger: CAGAGTTTGACATCGAAAGGGAACAACTGAGAGCAAAACTGAACCGAGAAGAGAACCGGACCAAAACCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271277.11
ENST00000441739.1
CDS CAA 72 bp TTCTACATTGTTGCCTGCAGTCAGCTCCCTGGTAGTTaGTATCTCTGGGTCACAATGGCCATTGGTTTTTGC +
Preference number: 6 (lower is better)
Translates to: FYIVACSQLPGS*YLWVTMAIGFC
Trigger: GCAAAAACCAATGGCCATTGTGACCCAGAGATACAAACTACCAGGGAGCTGACTGCAGGCAACAATGTAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS CAA 72 bp TCCTCCAGTCTAACAGTGAAACAAACGCTGCCACTATaGGGAGAAGCTGCTGTCACATCCTTCGGAAGAAAT +
Preference number: 6 (lower is better)
Translates to: SSSLTVKQTLPL*GEAAVTSFGRN
Trigger: ATTTCTTCCGAAGGATGTGACAGCAGCTTCTCCCAATAGTGGCAGCGTTTGTTTCACTGTTAGACTGGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000607039.1
CDS CAA 90 bp GTAGGCAAAAGTAACTCAACATCCTTACCATTTGCTACAACAGTATaGGAAGAGCAGCTGCTGGCAAGGTCTTCTGCAGTGGTCAAAGAG +
Preference number: 6 (lower is better)
Translates to: VGKSNSTSLPFATTV*EEQLLARSSAVVKE
Trigger: CTCTTTGACCACTGCAGAAGACCTTGCCAGCAGCTGCTCTTCCAATACTGTTGTAGCAAATGGTAAGGATGTTGAGTTACTTTTGCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS TCA 72 bp GAAAACTCTCTGTTTGGCAAAACACAGACATTAGCATaGGAGGCTCAGTTGCTGTGCCTTTGGACACGGTTA +
Preference number: 6 (lower is better)
Translates to: ENSLFGKTQTLA*EAQLLCLWTRL
Trigger: TAACCGTGTCCAAAGGCACAGCAACTGAGCCTCTCATGCTAATGTCTGTGTTTTGCCAAACAGAGAGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS CCA 72 bp ACTGGTTTCTTCAATTGCTCATTAGGGCTACTGTGCTaGTGGGAAGCCTCTAGGTCCTTCACTATCTTCTTT +
Preference number: 6 (lower is better)
Translates to: TGFFNCSLGLLC*WEASRSFTIFF
Trigger: AAAGAAGATAGTGAAGGACCTAGAGGCTTCCCACCAGCACAGTAGCCCTAATGAGCAATTGAAGAAACCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS CCA 72 bp CTTGCACTGCTTCATCACAACCTTAAGAATAGAGAGTaGATTTGTGCAGACTGGCTGCTTTTCGCCATCATT +
Preference number: 6 (lower is better)
Translates to: LALLHHNLKNRE*ICADWLLFAII
Trigger: AATGATGGCGAAAAGCAGCCAGTCTGCACAAATCCACTCTCTATTCTTAAGGTTGTGATGAAGCAGTGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271277.11
ENST00000441739.1
CDS CCA 72 bp GGTTTCTTCAATTGCTCATTAGGGCTACTGTGCTGGTaGGAAGCCTCTAGGTCCTTCACTATCTTCTTTAAA +
Preference number: 6 (lower is better)
Translates to: GFFNCSLGLLCW*EASRSFTIFFK
Trigger: TTTAAAGAAGATAGTGAAGGACCTAGAGGCTTCCCACCAGCACAGTAGCCCTAATGAGCAATTGAAGAAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS CAA 72 bp ACAGACATTAGCATGAGAGGCTCAGTTGCTGTGCCTTaGGACACGGTTACTGGTTTCTTCAATTGCTCATTA +
Preference number: 6 (lower is better)
Translates to: TDISMRGSVAVP*DTVTGFFNCSL
Trigger: TAATGAGCAATTGAAGAAACCAGTAACCGTGTCCAAAGGCACAGCAACTGAGCCTCTCATGCTAATGTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000271277.11
CDS CAA 72 bp CTTTCAGTGAAGGTAATTCCTATAAGGGGTTATATCTaGAGGGCCACTTACTGTCAGCATTCCCTGCACCTA +
Preference number: 6 (lower is better)
Translates to: LSVKVIPIRGYI*RATYCQHSLHL
Trigger: TAGGTGCAGGGAATGCTGACAGTAAGTGGCCCTCAAGATATAACCCCTTATAGGAATTACCTTCACTGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607039.1
CDS CAA 90 bp TTTCTTCTTTCAGGGTTTTGGTCCGGTTCTCTTCTCGGTTCAGTTTaGCTCTCAGTTGTTCCCTTTCGATGTCAAACTCTGATAACTGCT +
Preference number: 6 (lower is better)
Translates to: FLLSGFWSGSLLGSV*LSVVPFRCQTLITA
Trigger: AGCAGTTATCAGAGTTTGACATCGAAAGGGAACAACTGAGAGCAAAACTGAACCGAGAAGAGAACCGGACCAAAACCCTGAAAGAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000271277.11
ENST00000441739.1
CDS CAA 90 bp TTTCAAACTGCCTTTTGCATGTTCCTAGATCTTCCCTACAAATTATaGGACAGTGTATTGCAGAATGCTGTGGCCTGGGAGCTCCTTCTT +
Preference number: 6 (lower is better)
Translates to: FQTAFCMFLDLPYKL*DSVLQNAVAWELLL
Trigger: AAGAAGGAGCTCCCAGGCCACAGCATTCTGCAATACACTGTCCAATAATTTGTAGGGAAGATCTAGGAACATGCAAAAGGCAGTTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000607039.1
CDS CAA 72 bp AATTGGCTAGGCTACCAAAAACTGAATTTATCTGACTaGGTAAGTTCACATTTCTCTGAGAATCTGCATGTT +
Preference number: 6 (lower is better)
Translates to: NWLGYQKLNLSD*VSSHFSENLHV
Trigger: AACATGCAGATTCTCAGAGAAATGTGAACTTACCAAGTCAGATAAATTCAGTTTTTGGTAGCCTAGCCAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502356.3