RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CTTNBP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000077063

Ensembl transcript IDs: ENST00000160373.8, ENST00000412853.1, ENST00000416239.1, ENST00000434890.5, ENST00000435233.5, ENST00000441556.5, ENST00000445366.1, ENST00000446636.5, ENST00000454375.5, ENST00000467088.1, ENST00000482124.1, ENST00000487820.1

Found 784 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTTGCATGGGCTCGCCATCCCACCGCAGCTGCACCCAGCGGAAATaGTGCTGCACCAGCAAGTCGGAGCCCTGGAGACAGGCCTTGGCG +
Preference number: 1 (lower is better)
Translates to: PCMGSPSHRSCTQRK*CCTSKSEPWRQALA
Trigger: CGCCAAGGCCTGTCTCCAGGGCTCCGACTTGCTGGTGCAGCAGCATTTCCGCTGGGTGCAGCTGCGGTGGGATGGCGAGCCCATGCAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR GCA 90 bp TGCATGGGCTCGCCATCCCACCGCAGCTGCACCCAGCGGAAATGCTaGTGCACCAGCAAGTCGGAGCCCTGGAGACAGGCCTTGGCGATG +
Preference number: 1 (lower is better)
Translates to: CMGSPSHRSCTQRKC*CTSKSEPWRQALAM
Trigger: CATCGCCAAGGCCTGTCTCCAGGGCTCCGACTTGCTGGTGCAGCAGCATTTCCGCTGGGTGCAGCTGCGGTGGGATGGCGAGCCCATGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR GCA 90 bp AACCTCTGCAGCAGTCCTTGCATGGGCTCGCCATCCCACCGCAGCTaGACCCAGCGGAAATGCTGCTGCACCAGCAAGTCGGAGCCCTGG +
Preference number: 1 (lower is better)
Translates to: NLCSSPCMGSPSHRS*TQRKCCCTSKSEPW
Trigger: CCAGGGCTCCGACTTGCTGGTGCAGCAGCATTTCCGCTGGGTGCAGCTGCGGTGGGATGGCGAGCCCATGCAAGGACTGCTGCAGAGGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR TCA 90 bp AGAAGTGCTTCAGGTGTGCCCAAGCGGGCCAGGCAGGAGTTAAGCTaGCGCCAGACGGACAGAGCCCAGTCGACAATCTTGCACACAGGA +
Preference number: 1 (lower is better)
Translates to: RSASGVPKRARQELS*RQTDRAQSTILHTG
Trigger: TCCTGTGTGCAAGATTGTCGACTGGGCTCTGTCCGTCTGGCGTCAGCTTAACTCCTGCCTGGCCCGCTTGGGCACACCTGAAGCACTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR CCA 90 bp AGCTGCACCCAGCGGAAATGCTGCTGCACCAGCAAGTCGGAGCCCTaGAGACAGGCCTTGGCGATGGTTCCCATCAGAAAGCAGTTCTCA +
Preference number: 1 (lower is better)
Translates to: SCTQRKCCCTSKSEP*RQALAMVPIRKQFS
Trigger: TGAGAACTGCTTTCTGATGGGAACCATCGCCAAGGCCTGTCTCCAGGGCTCCGACTTGCTGGTGCAGCAGCATTTCCGCTGGGTGCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR GCA 90 bp GGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTaGGAGGACTGGTGTTCACCTTTCTCCAGGCACCACTCTCTCCTT +
Preference number: 1 (lower is better)
Translates to: GLAYSRWVKRSGQTS*EDWCSPFSRHHSLL
Trigger: AAGGAGAGAGTGGTGCCTGGAGAAAGGTGAACACCAGTCCTCGCAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAATAAGCCAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
3UTR CCA 90 bp TATTCACAACTTTCCTTCGTAAGAACCTCTGCAGCAGTCCTTGCATaGGCTCGCCATCCCACCGCAGCTGCACCCAGCGGAAATGCTGCT +
Preference number: 1 (lower is better)
Translates to: YSQLSFVRTSAAVLA*ARHPTAAAPSGNAA
Trigger: AGCAGCATTTCCGCTGGGTGCAGCTGCGGTGGGATGGCGAGCCCATGCAAGGACTGCTGCAGAGGTTCTTACGAAGGAAAGTTGTGAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR TCA 90 bp GCCTTATTCTTCCTCATAAAGTCCCACGGGGACTGCGCGAAGCTCTaGCCCACTGACCACGGCACATTTCCTAGCGTGATGGATCGTATG +
Preference number: 1 (lower is better)
Translates to: ALFFLIKSHGDCAKL*PTDHGTFPSVMDRM
Trigger: CATACGATCCATCACGCTAGGAAATGTGCCGTGGTCAGTGGGTCAGAGCTTCGCGCAGTCCCCGTGGGACTTTATGAGGAAGAATAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR GCA 90 bp GTGGGCAGCAGTCCAGCCTTCTCTGTTGGCGTGGTTAATGAGGTCTaGAGGAACAACAGGCTTGGATATGCCTTCAGGACTCTCTTCTCC +
Preference number: 1 (lower is better)
Translates to: VGSSPAFSVGVVNEV*RNNRLGYAFRTLFS
Trigger: GGAGAAGAGAGTCCTGAAGGCATATCCAAGCCTGTTGTTCCTGCAGACCTCATTAACCACGCCAACAGAGAAGGCTGGACTGCTGCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR GCA 90 bp AACTTATTCACAACTTTCCTTCGTAAGAACCTCTGCAGCAGTCCTTaGATGGGCTCGCCATCCCACCGCAGCTGCACCCAGCGGAAATGC +
Preference number: 1 (lower is better)
Translates to: NLFTTFLRKNLCSSP*MGSPSHRSCTQRKC
Trigger: GCATTTCCGCTGGGTGCAGCTGCGGTGGGATGGCGAGCCCATGCAAGGACTGCTGCAGAGGTTCTTACGAAGGAAAGTTGTGAATAAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR GCA 90 bp GCAAATGCTTGCAGTCATCAGTGGCAACATCATGCACAGTCCGATTaGACTTGTCTCTCCTTTCTGGCTCAAGCCCTCCGTGCCTACACA +
Preference number: 1 (lower is better)
Translates to: ANACSHQWQHHAQSD*TCLSFLAQALRAYT
Trigger: TGTGTAGGCACGGAGGGCTTGAGCCAGAAAGGAGAGACAAGTGCAATCGGACTGTGCATGATGTTGCCACTGATGACTGCAAGCATTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR CCA 90 bp TTGGAAGCAGCAATGTGGGCAGCAGTCCAGCCTTCTCTGTTGGCGTaGTTAATGAGGTCTGCAGGAACAACAGGCTTGGATATGCCTTCA +
Preference number: 1 (lower is better)
Translates to: LEAAMWAAVQPSLLA*LMRSAGTTGLDMPS
Trigger: TGAAGGCATATCCAAGCCTGTTGTTCCTGCAGACCTCATTAACCACGCCAACAGAGAAGGCTGGACTGCTGCCCACATTGCTGCTTCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR GCA 90 bp TTCAGATTCTCCAGCAAATGCTTGCAGTCATCAGTGGCAACATCATaGACAGTCCGATTGCACTTGTCTCTCCTTTCTGGCTCAAGCCCT +
Preference number: 1 (lower is better)
Translates to: FRFSSKCLQSSVATS*TVRLHLSLLSGSSP
Trigger: AGGGCTTGAGCCAGAAAGGAGAGACAAGTGCAATCGGACTGTGCATGATGTTGCCACTGATGACTGCAAGCATTTGCTGGAGAATCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR GCA 90 bp ACCACAGCCTGCTGTCCTTGGCTAGGGTGTCTTTTAGCAGTTGTCTaGCCAAAGCCAGGTTGTCTTTTCACAGAGGCTCTTGACAATATT +
Preference number: 1 (lower is better)
Translates to: TTACCPWLGCLLAVV*PKPGCLFTEALDNI
Trigger: AATATTGTCAAGAGCCTCTGTGAAAAGACAACCTGGCTTTGGGCAGACAACTGCTAAAAGACACCCTAGCCAAGGACAGCAGGCTGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR CCA 90 bp GCAGCACACAAGGGTGTGAAGCCATTTTTATCAGCAGCATTGACTTaGGCTTCTGCACTCAGCAGCAATCTCACACAGTCTGTATGTCCA +
Preference number: 1 (lower is better)
Translates to: AAHKGVKPFLSAALT*ASALSSNLTQSVCP
Trigger: TGGACATACAGACTGTGTGAGATTGCTGCTGAGTGCAGAAGCCCAAGTCAATGCTGCTGATAAAAATGGCTTCACACCCTTGTGTGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR TCA 90 bp AAGCCAGGTTGTCTTTTCACAGAGGCTCTTGACAATATTGCTTCTTaGACTCTGGGTGCGATGACGCCATTCCACAGCTTAGACATCCAC +
Preference number: 1 (lower is better)
Translates to: KPGCLFTEALDNIAS*TLGAMTPFHSLDIH
Trigger: GTGGATGTCTAAGCTGTGGAATGGCGTCATCGCACCCAGAGTTCAAGAAGCAATATTGTCAAGAGCCTCTGTGAAAAGACAACCTGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR GCA 90 bp GTACATAAGAAGCTTGAGGCTGTCCACATTACCAGTGTCCACAGCTaGGTGAACTGGTGTCCAGCCATCTGTGGTTTTTACACTTCGATT +
Preference number: 1 (lower is better)
Translates to: VHKKLEAVHITSVHS*VNWCPAICGFYTSI
Trigger: AATCGAAGTGTAAAAACCACAGATGGCTGGACACCAGTTCACGCAGCTGTGGACACTGGTAATGTGGACAGCCTCAAGCTTCTTATGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR GCA 90 bp ACAGTCCGATTGCACTTGTCTCTCCTTTCTGGCTCAAGCCCTCCGTaGCTACACAAGATTTCTAGGCAGTTCTTAAAACCTTTGGAAGCA +
Preference number: 1 (lower is better)
Translates to: TVRLHLSLLSGSSPP*LHKISRQFLKPLEA
Trigger: TGCTTCCAAAGGTTTTAAGAACTGCCTAGAAATCTTGTGTAGGCACGGAGGGCTTGAGCCAGAAAGGAGAGACAAGTGCAATCGGACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR CCA 90 bp TCTTATTTTTCATACCTTCAGTGCTTAGGTCTGGCTTATTCCAGGTaGGTAAAGAGAAGCGGCCAGACTTCCTGCGAGGACTGGTGTTCA +
Preference number: 1 (lower is better)
Translates to: SYFSYLQCLGLAYSR*VKRSGQTSCEDWCS
Trigger: TGAACACCAGTCCTCGCAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAATAAGCCAGACCTAAGCACTGAAGGTATGAAAAATAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
3UTR GCA 90 bp CAAGGGTGTGAAGCCATTTTTATCAGCAGCATTGACTTGGGCTTCTaGACTCAGCAGCAATCTCACACAGTCTGTATGTCCATTCTTAGC +
Preference number: 1 (lower is better)
Translates to: QGCEAIFISSIDLGF*TQQQSHTVCMSILS
Trigger: GCTAAGAATGGACATACAGACTGTGTGAGATTGCTGCTGAGTGCAGAAGCCCAAGTCAATGCTGCTGATAAAAATGGCTTCACACCCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR CCA 90 bp GCAGAGTGCAAGCTGATGTACTATGTAGTCTTGCAAGCTTCCTTCTaGGCCGTGGAAAATGACATTATGATATTGCTCAACCAGCCTGAG +
Preference number: 1 (lower is better)
Translates to: AECKLMYYVVLQASF*AVENDIMILLNQPE
Trigger: CTCAGGCTGGTTGAGCAATATCATAATGTCATTTTCCACGGCCCAGAAGGAAGCTTGCAAGACTACATAGTACATCAGCTTGCACTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR TCA 90 bp TATGCCTTCAGGACTCTCTTCTCCTCCATCCAAGTCAAAGACACTTaGCTCGGACTCCTCCTCATTGAAAGAATTTCCATGAGCTGGTAT +
Preference number: 1 (lower is better)
Translates to: YAFRTLFSSIQVKDT*LGLLLIERISMSWY
Trigger: ATACCAGCTCATGGAAATTCTTTCAATGAGGAGGAGTCCGAGTCAAGTGTCTTTGACTTGGATGGAGGAGAAGAGAGTCCTGAAGGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR TCA 90 bp AAGTGTTATAACTGGAAACTATGGATAAAGGGAAACTTCCTCCTTTaGAATCAGCTGTATGCTGGTCTAGCTCTGCTCTGGGGAGGGGAC +
Preference number: 1 (lower is better)
Translates to: KCYNWKLWIKGNFLL*NQLYAGLALLWGGD
Trigger: GTCCCCTCCCCAGAGCAGAGCTAGACCAGCATACAGCTGATTTCAAAGGAGGAAGTTTCCCTTTATCCATAGTTTCCAGTTATAACACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR TCA 90 bp TCAAAGACACTTGACTCGGACTCCTCCTCATTGAAAGAATTTCCATaGGCTGGTATTCTATGGTACATAAGAAGCTTGAGGCTGTCCACA +
Preference number: 1 (lower is better)
Translates to: SKTLDSDSSSLKEFP*AGILWYIRSLRLST
Trigger: TGTGGACAGCCTCAAGCTTCTTATGTACCATAGAATACCAGCTCATGGAAATTCTTTCAATGAGGAGGAGTCCGAGTCAAGTGTCTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR TCA 90 bp TCCTTGACAAGATCTGCTTCGTCATCTGAACCCAGAGAGAGTCTCTaGTCCAAATTCAACGTCAGTGATAGATCATTCTCTAAAGACTTT +
Preference number: 1 (lower is better)
Translates to: SLTRSASSSEPRESL*SKFNVSDRSFSKDF
Trigger: AAAGTCTTTAGAGAATGATCTATCACTGACGTTGAATTTGGATCAGAGACTCTCTCTGGGTTCAGATGACGAAGCAGATCTTGTCAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
3UTR GCA 90 bp ACCAGTAGTATTAGTTTCAGATTGATCTCATACACATCAGAGACTTaGACAATCCTGGCTTCATCACTTGCTAGATGCATGACTTTGAGC +
Preference number: 1 (lower is better)
Translates to: TSSISFRLISYTSET*TILASSLARCMTLS
Trigger: GCTCAAAGTCATGCATCTAGCAAGTGATGAAGCCAGGATTGTGCAAGTCTCTGATGTGTATGAGATCAATCTGAAACTAATACTACTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416239.1
3UTR CCA 90 bp CTTGTATTACTGCTGCTGCTGCTTCTTTTGGTGTTCTGGGAACACTaGGTGACTTTACTTCTAGGAACAGGAAGAAAAGATTTAACTCTT +
Preference number: 1 (lower is better)
Translates to: LVLLLLLLLLVFWEH*VTLLLGTGRKDLTL
Trigger: AAGAGTTAAATCTTTTCTTCCTGTTCCTAGAAGTAAAGTCACCCAGTGTTCCCAGAACACCAAAAGAAGCAGCAGCAGCAGTAATACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR TCA 90 bp TTTTTACAGGCCAGGTATAGAGGTGTCTGTCCTCCATCAGCAGCATaGTTAATGTTAGCATCATATGAAATTAATAATTCTACACACTCG +
Preference number: 1 (lower is better)
Translates to: FLQARYRGVCPPSAA*LMLASYEINNSTHS
Trigger: CGAGTGTGTAGAATTATTAATTTCATATGATGCTAACATTAATCATGCTGCTGATGGAGGACAGACACCTCTATACCTGGCCTGTAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR GCA 90 bp GCCAGACGGACAGAGCCCAGTCGACAATCTTGCACACAGGATCGCAGGGGGAGGCCATCCCACCGCAGCTaGACCCAGCGGAAATGCTGC +
Preference number: 2 (lower is better)
Translates to: ARRTEPSRQSCTQDRRGRPSHRS*TQRKCC
Trigger: GCAGCATTTCCGCTGGGTGCAGCTGCGGTGGGATGG...CCTCCCCCTGCGATCCTGTGTGCAAGATTGTCGACTGGGCTCTGTCCGTCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR GCA 90 bp CTCGCCATCCCACCGCAGCTGCACCCAGCGGAAATGCTGCTGCACCAGCAAGTCTGCAGGGGCTTTCAGTaGTGCGATTTTCAAGAGGTG +
Preference number: 2 (lower is better)
Translates to: LAIPPQLHPAEMLLHQQVCRGFQ*CDFQEV
Trigger: CACCTCTTGAAAATCGCAGCACTGAAAGCCCCTGCA...GACTTGCTGGTGCAGCAGCATTTCCGCTGGGTGCAGCTGCGGTGGGATGGCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR TCA 90 bp CTCGCCATCCCACCGCAGCTGCACCCAGCGGAAATGCTGCTGCACCAGCAAGTCCTGACAAAAGCACAGTaGTGTGCTCTGCCTTATTCT +
Preference number: 2 (lower is better)
Translates to: LAIPPQLHPAEMLLHQQVLTKAQ*CALPYS
Trigger: AGAATAAGGCAGAGCACATCACTGTGCTTTTGTCAG...GACTTGCTGGTGCAGCAGCATTTCCGCTGGGTGCAGCTGCGGTGGGATGGCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR GCA 90 bp GCAAGTCGGAGCCCTGGAGACAGGCCTTGGCGATGGTTCCCATCAGAAAGCAGTATGTCCCTGAGCAGCTaGAGCACACAAGGGTGTGAA +
Preference number: 2 (lower is better)
Translates to: ASRSPGDRPWRWFPSESSMSLSS*STQGCE
Trigger: TTCACACCCTTGTGTGCTGCAGCTGCTCAGGGACAT...ACTGCTTTCTGATGGGAACCATCGCCAAGGCCTGTCTCCAGGGCTCCGACTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR CCA 90 bp CTCGCCATCCCACCGCAGCTGCACCCAGCGGAAATGCTGCTGCACCAGCAAGTCGTGTTCTGGGAACACTaGGTGACTTTACTTCTAGGA +
Preference number: 2 (lower is better)
Translates to: LAIPPQLHPAEMLLHQQVVFWEH*VTLLLG
Trigger: TCCTAGAAGTAAAGTCACCCAGTGTTCCCAGAACAC...GACTTGCTGGTGCAGCAGCATTTCCGCTGGGTGCAGCTGCGGTGGGATGGCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR TCA 90 bp GCCAGACGGACAGAGCCCAGTCGACAATCTTGCACACAGGATCGCAGGGGGAGGTGCTCTGAAGTTCCTTaGCAAGATCTGCTTCGTCAT +
Preference number: 2 (lower is better)
Translates to: ARRTEPSRQSCTQDRRGRCSEVP*QDLLRH
Trigger: ATGACGAAGCAGATCTTGTCAAGGAACTTCAGAGCA...CCTCCCCCTGCGATCCTGTGTGCAAGATTGTCGACTGGGCTCTGTCCGTCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR CCA 90 bp GCAAGTCGGAGCCCTGGAGACAGGCCTTGGCGATGGTTCCCATCAGAAAGCAGTCCTTCTCTGTTGGCGTaGTTAATGAGGTCTGCAGGA +
Preference number: 2 (lower is better)
Translates to: ASRSPGDRPWRWFPSESSPSLLA*LMRSAG
Trigger: TCCTGCAGACCTCATTAACCACGCCAACAGAGAAGG...ACTGCTTTCTGATGGGAACCATCGCCAAGGCCTGTCTCCAGGGCTCCGACTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR CAA 90 bp TCACTTGGGCATGCCCAGGAACTACAGGACAAGACAGGAAATATTTaGGTCCAAGAAGTGCTTCAGGTGTGCCCAAGCGGGCCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: SLGHAQELQDKTGNI*VQEVLQVCPSGPGR
Trigger: CCTGCCTGGCCCGCTTGGGCACACCTGAAGCACTTCTTGGACCAAAATATTTCCTGTCTTGTCCTGTAGTTCCTGGGCATGCCCAAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR TCA 90 bp GCAAGTCGGAGCCCTGGAGACAGGCCTTGGCGATGGTTCCCATCAGAAAGCAGTCAGCACACAAGGGTGTaGAGCCATTTTTATCAGCAG +
Preference number: 2 (lower is better)
Translates to: ASRSPGDRPWRWFPSESSQHTRV*SHFYQQ
Trigger: CTGCTGATAAAAATGGCTTCACACCCTTGTGTGCTG...ACTGCTTTCTGATGGGAACCATCGCCAAGGCCTGTCTCCAGGGCTCCGACTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR TCA 90 bp GCAAGTCGGAGCCCTGGAGACAGGCCTTGGCGATGGTTCCCATCAGAAAGCAGTATTGCTCAACCAGCCTaGGGTAGTTCTGCATCATCT +
Preference number: 2 (lower is better)
Translates to: ASRSPGDRPWRWFPSESSIAQPA*GSSASS
Trigger: AGATGATGCAGAACTACCTCAGGCTGGTTGAGCAAT...ACTGCTTTCTGATGGGAACCATCGCCAAGGCCTGTCTCCAGGGCTCCGACTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR GCA 90 bp TCTGGGTGCGATGACGCCATTCCACAGCTTAGACATCCACTTCACTGTCACTTGACCAGTGTCCACAGCTaGGTGAACTGGTGTCCAGCC +
Preference number: 2 (lower is better)
Translates to: SGCDDAIPQLRHPLHCHLTSVHS*VNWCPA
Trigger: GGCTGGACACCAGTTCACGCAGCTGTGGACACTGGT...CAAGTGACAGTGAAGTGGATGTCTAAGCTGTGGAATGGCGTCATCGCACCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR GCA 90 bp GCAAGTCGGAGCCCTGGAGACAGGCCTTGGCGATGGTTCCCATCAGAAAGCAGTCAACAGGCTTGGATATaGCTTCAGGACTCTCTTCTC +
Preference number: 2 (lower is better)
Translates to: ASRSPGDRPWRWFPSESSQQAWI*LQDSLL
Trigger: GAGAAGAGAGTCCTGAAGGCATATCCAAGCCTGTTG...ACTGCTTTCTGATGGGAACCATCGCCAAGGCCTGTCTCCAGGGCTCCGACTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR CAA 90 bp AGCAAATGCTTGCAGTCATCAGTGGCAACATCATGCACAGTCCGATaGCACTTGTCTCTCCTTTCTGGCTCAAGCCCTCCGTGCCTACAC +
Preference number: 2 (lower is better)
Translates to: SKCLQSSVATSCTVR*HLSLLSGSSPPCLH
Trigger: GTGTAGGCACGGAGGGCTTGAGCCAGAAAGGAGAGACAAGTGCAATCGGACTGTGCATGATGTTGCCACTGATGACTGCAAGCATTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR CCA 90 bp AGAGCAGCTTTGACCACAGCCTGCTGTCCTTGGCTAGGGTGTCTTTTAGCAGTTGACAGGCCTTGGCGATaGTTCCCATCAGAAAGCAGT +
Preference number: 2 (lower is better)
Translates to: RAALTTACCPWLGCLLAVDRPWR*FPSESS
Trigger: ACTGCTTTCTGATGGGAACCATCGCCAAGGCCTGTC...AACTGCTAAAAGACACCCTAGCCAAGGACAGCAGGCTGTGGTCAAAGCTGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR CAA 90 bp AAACCTTTGGAAGCAGCAATGTGGGCAGCAGTCCAGCCTTCTCTGTaGGCGTGGTTAATGAGGTCTGCAGGAACAACAGGCTTGGATATG +
Preference number: 2 (lower is better)
Translates to: KPLEAAMWAAVQPSL*AWLMRSAGTTGLDM
Trigger: CATATCCAAGCCTGTTGTTCCTGCAGACCTCATTAACCACGCCAACAGAGAAGGCTGGACTGCTGCCCACATTGCTGCTTCCAAAGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR CAA 90 bp TGCTTGCAGTCATCAGTGGCAACATCATGCACAGTCCGATTGCACTaGTCTCTCCTTTCTGGCTCAAGCCCTCCGTGCCTACACAAGATT +
Preference number: 2 (lower is better)
Translates to: CLQSSVATSCTVRLH*SLLSGSSPPCLHKI
Trigger: AATCTTGTGTAGGCACGGAGGGCTTGAGCCAGAAAGGAGAGACAAGTGCAATCGGACTGTGCATGATGTTGCCACTGATGACTGCAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR TCA 90 bp TATTGCAAGTCACGTCTTCCAGACTCCACCATCCATCAGAAGAGATTGCCTGGACACTCGAAATGTCCCTaGGCAGCTGCAGCACACAAG +
Preference number: 2 (lower is better)
Translates to: YCKSRLPDSTIHQKRLPGHSKCP*AAAAHK
Trigger: CTTGTGTGCTGCAGCTGCTCAGGGACATTTCGAGTG...TCCAGGCAATCTCTTCTGATGGATGGTGGAGTCTGGAAGACGTGACTTGCAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR TCA 90 bp GATCGTATGCTTCTTGCACTGAGGCCGATGTTGGAATCAGTGGTGTTATTGCAAGTGTCCACAGCTGCGTaGACTGGTGTCCAGCCATCT +
Preference number: 2 (lower is better)
Translates to: DRMLLALRPMLESVVLLQVSTAA*TGVQPS
Trigger: AGATGGCTGGACACCAGTTCACGCAGCTGTGGACAC...TTGCAATAACACCACTGATTCCAACATCGGCCTCAGTGCAAGAAGCATACGATC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR CCA 90 bp CCAGCAAATGCTTGCAGTCATCAGTGGCAACATCATGCACAGTCCGATTGCACTTTGGAAGCAGCAATGTaGGCAGCAGTCCAGCCTTCT +
Preference number: 2 (lower is better)
Translates to: PANACSHQWQHHAQSDCTLEAAM*AAVQPS
Trigger: AGAAGGCTGGACTGCTGCCCACATTGCTGCTTCCAA...AGTGCAATCGGACTGTGCATGATGTTGCCACTGATGACTGCAAGCATTTGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR CAA 90 bp GCAGCTGCAGCACACAAGGGTGTGAAGCCATTTTTATCAGCAGCATaGACTTGGGCTTCTGCACTCAGCAGCAATCTCACACAGTCTGTA +
Preference number: 2 (lower is better)
Translates to: AAAAHKGVKPFLSAA*TWASALSSNLTQSV
Trigger: TACAGACTGTGTGAGATTGCTGCTGAGTGCAGAAGCCCAAGTCAATGCTGCTGATAAAAATGGCTTCACACCCTTGTGTGCTGCAGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR CAA 90 bp CCTTCTCTGTTGGCGTGGTTAATGAGGTCTGCAGGAACAACAGGCTaGGATATGCCTTCAGGACTCTCTTCTCCTCCATCCAAGTCAAAG +
Preference number: 2 (lower is better)
Translates to: PSLLAWLMRSAGTTG*DMPSGLSSPPSKSK
Trigger: CTTTGACTTGGATGGAGGAGAAGAGAGTCCTGAAGGCATATCCAAGCCTGTTGTTCCTGCAGACCTCATTAACCACGCCAACAGAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR TCA 90 bp TCTGGGTGCGATGACGCCATTCCACAGCTTAGACATCCACTTCACTGTCACTTGGCACATTTCCTAGCGTaGTGGATCGTATGCTTCTTG +
Preference number: 2 (lower is better)
Translates to: SGCDDAIPQLRHPLHCHLAHFLA*WIVCFL
Trigger: CAAGAAGCATACGATCCATCACGCTAGGAAATGTGC...CAAGTGACAGTGAAGTGGATGTCTAAGCTGTGGAATGGCGTCATCGCACCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR GCA 90 bp TCTGGGTGCGATGACGCCATTCCACAGCTTAGACATCCACTTCACTGTCACTTGTCAGTGGCAACATCATaGACAGTCCGATTGCACTTG +
Preference number: 2 (lower is better)
Translates to: SGCDDAIPQLRHPLHCHLSVATS*TVRLHL
Trigger: CAAGTGCAATCGGACTGTGCATGATGTTGCCACTGA...CAAGTGACAGTGAAGTGGATGTCTAAGCTGTGGAATGGCGTCATCGCACCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR GCA 90 bp CATGCCCAGGAACTACAGGACAAGACAGGAAATATTTTGGTCCAAGAAGTGCTTTGCACCCAGCGGAAATaGTGCTGCACCAGCAAGTCG +
Preference number: 2 (lower is better)
Translates to: HAQELQDKTGNILVQEVLCTQRK*CCTSKS
Trigger: CGACTTGCTGGTGCAGCAGCATTTCCGCTGGGTGCA...AAGCACTTCTTGGACCAAAATATTTCCTGTCTTGTCCTGTAGTTCCTGGGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR CAA 90 bp TGCAGCACACAAGGGTGTGAAGCCATTTTTATCAGCAGCATTGACTaGGGCTTCTGCACTCAGCAGCAATCTCACACAGTCTGTATGTCC +
Preference number: 2 (lower is better)
Translates to: CSTQGCEAIFISSID*GFCTQQQSHTVCMS
Trigger: GGACATACAGACTGTGTGAGATTGCTGCTGAGTGCAGAAGCCCAAGTCAATGCTGCTGATAAAAATGGCTTCACACCCTTGTGTGCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR GCA 90 bp AGGCAGTTCTTAAAACCTTTGGAAGCAGCAATGTGGGCAGCAGTCCAGCCTTCTGTGGTTAATGAGGTCTaGAGGAACAACAGGCTTGGA +
Preference number: 2 (lower is better)
Translates to: RQFLKPLEAAMWAAVQPSVVNEV*RNNRLG
Trigger: TCCAAGCCTGTTGTTCCTGCAGACCTCATTAACCAC...AGAAGGCTGGACTGCTGCCCACATTGCTGCTTCCAAAGGTTTTAAGAACTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR CCA 90 bp AGAGCAGCTTTGACCACAGCCTGCTGTCCTTGGCTAGGGTGTCTTTTAGCAGTTGTGTCCAGCCATCTGTaGTTTTTACACTTCGATTGG +
Preference number: 2 (lower is better)
Translates to: RAALTTACCPWLGCLLAVVSSHL*FLHFDW
Trigger: CCAATCGAAGTGTAAAAACCACAGATGGCTGGACAC...AACTGCTAAAAGACACCCTAGCCAAGGACAGCAGGCTGTGGTCAAAGCTGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR CCA 90 bp TATTGCAAGTCACGTCTTCCAGACTCCACCATCCATCAGAAGAGATTGCCTGGAGCTTGCAGTCATCAGTaGCAACATCATGCACAGTCC +
Preference number: 2 (lower is better)
Translates to: YCKSRLPDSTIHQKRLPGACSHQ*QHHAQS
Trigger: GGACTGTGCATGATGTTGCCACTGATGACTGCAAGC...TCCAGGCAATCTCTTCTGATGGATGGTGGAGTCTGGAAGACGTGACTTGCAATA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR CAA 90 bp CGTATGCTTCTTGCACTGAGGCCGATGTTGGAATCAGTGGTGTTATaGCAAGTCACGTCTTCCAGACTCCACCATCCATCAGAAGAGATT +
Preference number: 2 (lower is better)
Translates to: RMLLALRPMLESVVL*QVTSSRLHHPSEEI
Trigger: AATCTCTTCTGATGGATGGTGGAGTCTGGAAGACGTGACTTGCAATAACACCACTGATTCCAACATCGGCCTCAGTGCAAGAAGCATACG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR GCA 90 bp CCAGAGAGAGTCTCTGATCCAAATTCAACGTCAGTGATAGATCATTCTCTAAAGAGCGGCCAGACTTCCTaGGAGGACTGGTGTTCACCT +
Preference number: 2 (lower is better)
Translates to: PERVSDPNSTSVIDHSLKSGQTS*EDWCSP
Trigger: AGGTGAACACCAGTCCTCGCAGGAAGTCTGGCCGCT...CTTTAGAGAATGATCTATCACTGACGTTGAATTTGGATCAGAGACTCTCTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
3UTR-3UTR GCA 90 bp TGGGAACACTGGGTGACTTTACTTCTAGGAACAGGAAGAAAAGATTTAACTCTTCTCTGCAGCAGTCCTTaGATGGGCTCGCCATCCCAC +
Preference number: 2 (lower is better)
Translates to: WEHWVTLLLGTGRKDLTLLCSSP*MGSPSH
Trigger: GTGGGATGGCGAGCCCATGCAAGGACTGCTGCAGAG...AAGAGTTAAATCTTTTCTTCCTGTTCCTAGAAGTAAAGTCACCCAGTGTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR CCA 90 bp TTGGAAAAACCAGCATCTACTTCAGCTCTCACTATTTCACAGGAGAATCCTGCACTTGTCTCTCCTTTCTaGCTCAAGCCCTCCGTGCCT +
Preference number: 2 (lower is better)
Translates to: LEKPASTSALTISQENPALVSPF*LKPSVP
Trigger: AGGCACGGAGGGCTTGAGCCAGAAAGGAGAGACAAG...TGCAGGATTCTCCTGTGAAATAGTGAGAGCTGAAGTAGATGCTGGTTTTTCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR TCA 90 bp GATCGTATGCTTCTTGCACTGAGGCCGATGTTGGAATCAGTGGTGTTATTGCAACCCAGAGAGAGTCTCTaGTCCAAATTCAACGTCAGT +
Preference number: 2 (lower is better)
Translates to: DRMLLALRPMLESVVLLQPRESL*SKFNVS
Trigger: ACTGACGTTGAATTTGGATCAGAGACTCTCTCTGGG...TTGCAATAACACCACTGATTCCAACATCGGCCTCAGTGCAAGAAGCATACGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR TCA 90 bp CTTTATTTCCATTTTTACAGGCCAGGTATAGAGGTGTCTGTCCTCCATCAGCAGATCTGCTTCGTCATCTaGACCCAGAGAGAGTCTCTG +
Preference number: 2 (lower is better)
Translates to: LYFHFYRPGIEVSVLHQQICFVI*TQRESL
Trigger: CAGAGACTCTCTCTGGGTTCAGATGACGAAGCAGAT...CTGCTGATGGAGGACAGACACCTCTATACCTGGCCTGTAAAAATGGAAATAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR GCA 90 bp GATCGTATGCTTCTTGCACTGAGGCCGATGTTGGAATCAGTGGTGTTATTGCAAATTGACTTGGGCTTCTaGACTCAGCAGCAATCTCAC +
Preference number: 2 (lower is better)
Translates to: DRMLLALRPMLESVVLLQIDLGF*TQQQSH
Trigger: GTGAGATTGCTGCTGAGTGCAGAAGCCCAAGTCAAT...TTGCAATAACACCACTGATTCCAACATCGGCCTCAGTGCAAGAAGCATACGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR GCA 90 bp TTTTTCATACCTTCAGTGCTTAGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGGGCTCAAGCCCTCCGTaGCTACACAAGATTTCTAGG +
Preference number: 2 (lower is better)
Translates to: FFIPSVLRSGLFQVGKEKGSSPP*LHKISR
Trigger: CCTAGAAATCTTGTGTAGGCACGGAGGGCTTGAGCC...CTTCTCTTTACCCACCTGGAATAAGCCAGACCTAAGCACTGAAGGTATGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR GCA 90 bp AGAGCAGCTTTGACCACAGCCTGCTGTCCTTGGCTAGGGTGTCTTTTAGCAGTTCACAGTGATGTGCTCTaGCTTATTCTTCCTCATAAA +
Preference number: 2 (lower is better)
Translates to: RAALTTACCPWLGCLLAVHSDVL*LILPHK
Trigger: TTTATGAGGAAGAATAAGGCAGAGCACATCACTGTG...AACTGCTAAAAGACACCCTAGCCAAGGACAGCAGGCTGTGGTCAAAGCTGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR CCA 90 bp AGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTGCGAGGATATAACTGGAAACTATaGATAAAGGGAAACTTCCTC +
Preference number: 2 (lower is better)
Translates to: RSGLFQVGKEKRPDFLRGYNWKL*IKGNFL
Trigger: GAGGAAGTTTCCCTTTATCCATAGTTTCCAGTTATA...TCCTCGCAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAATAAGCCAGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
3UTR-3UTR CCA 90 bp TTGGAAAAACCAGCATCTACTTCAGCTCTCACTATTTCACAGGAGAATCCTGCATCAGCAGCATTGACTTaGGCTTCTGCACTCAGCAGC +
Preference number: 2 (lower is better)
Translates to: LEKPASTSALTISQENPASAALT*ASALSS
Trigger: GCTGCTGAGTGCAGAAGCCCAAGTCAATGCTGCTGA...TGCAGGATTCTCCTGTGAAATAGTGAGAGCTGAAGTAGATGCTGGTTTTTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR TCA 90 bp CTGGAGAGGGATCATGGAGGCATAAGTCACACTACTGAGACAGCCTTCTTGAGGTTGAAAGAATTTCCATaGGCTGGTATTCTATGGTAC +
Preference number: 2 (lower is better)
Translates to: LERDHGGISHTTETAFLRLKEFP*AGILWY
Trigger: GTACCATAGAATACCAGCTCATGGAAATTCTTTCAA...CCTCAAGAAGGCTGTCTCAGTAGTGTGACTTATGCCTCCATGATCCCTCTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR TCA 90 bp CATGCCCAGGAACTACAGGACAAGACAGGAAATATTTTGGTCCAAGAAGTGCTTCGGACTCCTCCTCATTaGAAGAATTTCCATGAGCTG +
Preference number: 2 (lower is better)
Translates to: HAQELQDKTGNILVQEVLRTPPH*KNFHEL
Trigger: CAGCTCATGGAAATTCTTTCAATGAGGAGGAGTCCG...AAGCACTTCTTGGACCAAAATATTTCCTGTCTTGTCCTGTAGTTCCTGGGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR TCA 90 bp CATGCCCAGGAACTACAGGACAAGACAGGAAATATTTTGGTCCAAGAAGTGCTTCAAGTCAAAGACACTTaGCTCGGACTCCTCCTCATT +
Preference number: 2 (lower is better)
Translates to: HAQELQDKTGNILVQEVLQVKDT*LGLLLI
Trigger: AATGAGGAGGAGTCCGAGTCAAGTGTCTTTGACTTG...AAGCACTTCTTGGACCAAAATATTTCCTGTCTTGTCCTGTAGTTCCTGGGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR CCA 90 bp CTTAGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTGCGATATAACTGGAAACTATaGATAAAGGGAAACTTCCTC +
Preference number: 2 (lower is better)
Translates to: LRSGLFQVGKEKRPDFLRYNWKL*IKGNFL
Trigger: GAGGAAGTTTCCCTTTATCCATAGTTTCCAGTTATA...TCGCAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAATAAGCCAGACCTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
3UTR-3UTR CCA 90 bp AAGGGTATTTTAAGAGCATTCAGATTCTCCAGCAAATGCTTGCAGTCATCAGTGACTTCCTGCGAGGACTaGTGTTCACCTTTCTCCAGG +
Preference number: 2 (lower is better)
Translates to: KGILRAFRFSSKCLQSSVTSCED*CSPFSR
Trigger: CCTGGAGAAAGGTGAACACCAGTCCTCGCAGGAAGT...CACTGATGACTGCAAGCATTTGCTGGAGAATCTGAATGCTCTTAAAATACCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR CAA 90 bp TTGTCTGTGCTTCAGGCAGAGTGCAAGCTGATGTACTATGTAGTCTaGCAAGCTTCCTTCTGGGCCGTGGAAAATGACATTATGATATTG +
Preference number: 2 (lower is better)
Translates to: LSVLQAECKLMYYVV*QASFWAVENDIMIL
Trigger: CAATATCATAATGTCATTTTCCACGGCCCAGAAGGAAGCTTGCAAGACTACATAGTACATCAGCTTGCACTCTGCCTGAAGCACAGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR TCA 90 bp GATTGCACTTGTCTCTCCTTTCTGGCTCAAGCCCTCCGTGCCTACACAAGATTTAGCATGTATGCAGTATaGTTTCTGGACTTCCTTAAA +
Preference number: 2 (lower is better)
Translates to: DCTCLSFLAQALRAYTRFSMYAV*FLDFLK
Trigger: TTTAAGGAAGTCCAGAAATCATACTGCATACATGCT...AAATCTTGTGTAGGCACGGAGGGCTTGAGCCAGAAAGGAGAGACAAGTGCAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR TCA 90 bp ATTTTAAGAGCATTCAGATTCTCCAGCAAATGCTTGCAGTCATCAGTGGCAACACTGCATTCAGTAGTTTaGTGGCTGCTGAGAGGACTG +
Preference number: 2 (lower is better)
Translates to: ILRAFRFSSKCLQSSVATLHSVV*WLLRGL
Trigger: CAGTCCTCTCAGCAGCCATCAAACTACTGAATGCAG...TGTTGCCACTGATGACTGCAAGCATTTGCTGGAGAATCTGAATGCTCTTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR TCA 90 bp ACAACAGGCTTGGATATGCCTTCAGGACTCTCTTCTCCTCCATCCAAGTCAAAGCCTCCATCAGCAGCATaGTTAATGTTAGCATCATAT +
Preference number: 2 (lower is better)
Translates to: TTGLDMPSGLSSPPSKSKPPSAA*LMLASY
Trigger: ATATGATGCTAACATTAATCATGCTGCTGATGGAGG...CTTTGACTTGGATGGAGGAGAAGAGAGTCCTGAAGGCATATCCAAGCCTGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR GCA 90 bp GGAAGAAAAGATTTAACTCTTGAAACACCCAACTCAGTCTTTGATTTACTGTTGAGCGGCCAGACTTCCTaGGAGGACTGGTGTTCACCT +
Preference number: 2 (lower is better)
Translates to: GRKDLTLETPNSVFDLLLSGQTS*EDWCSP
Trigger: AGGTGAACACCAGTCCTCGCAGGAAGTCTGGCCGCT...CAACAGTAAATCAAAGACTGAGTTGGGTGTTTCAAGAGTTAAATCTTTTCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
3UTR-3UTR CCA 90 bp TGGGAACACTGGGTGACTTTACTTCTAGGAACAGGAAGAAAAGATTTAACTCTTACTTCCTGCGAGGACTaGTGTTCACCTTTCTCCAGG +
Preference number: 2 (lower is better)
Translates to: WEHWVTLLLGTGRKDLTLTSCED*CSPFSR
Trigger: CCTGGAGAAAGGTGAACACCAGTCCTCGCAGGAAGT...AAGAGTTAAATCTTTTCTTCCTGTTCCTAGAAGTAAAGTCACCCAGTGTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
3UTR CAA 90 bp TATTGCAAGTCACGTCTTCCAGACTCCACCATCCATCAGAAGAGATaGCCTGGAAATGATTTGTCAGAGCTTGACTCACTGCTTTTGAAA +
Preference number: 2 (lower is better)
Translates to: YCKSRLPDSTIHQKR*PGNDLSELDSLLLK
Trigger: TTTCAAAAGCAGTGAGTCAAGCTCTGACAAATCATTTCCAGGCAATCTCTTCTGATGGATGGTGGAGTCTGGAAGACGTGACTTGCAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR TCA 90 bp CTAATGAACAGGTCTAGTAGCTGTTCCTTGGAAAAACCAGCATCTACTTCAGCTGCATTGATAATAAAGTaGCATTTCCCTGGGCAGCAG +
Preference number: 2 (lower is better)
Translates to: LMNRSSSCSLEKPASTSAALIIK*HFPGQQ
Trigger: CTGCTGCCCAGGGAAATGTCACTTTATTATCAATGC...AGCTGAAGTAGATGCTGGTTTTTCCAAGGAACAGCTACTAGACCTGTTCATTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR TCA 90 bp TGGGAACACTGGGTGACTTTACTTCTAGGAACAGGAAGAAAAGATTTAACTCTTGTATGCTTCTTGCACTaGGGCCGATGTTGGAATCAG +
Preference number: 2 (lower is better)
Translates to: WEHWVTLLLGTGRKDLTLVCFLH*GRCWNQ
Trigger: CTGATTCCAACATCGGCCTCAGTGCAAGAAGCATAC...AAGAGTTAAATCTTTTCTTCCTGTTCCTAGAAGTAAAGTCACCCAGTGTTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR GCA 90 bp TTTTTCATACCTTCAGTGCTTAGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGTATCAGACTCAGACTTaGTGGAGCACATGCTCTGAA +
Preference number: 2 (lower is better)
Translates to: FFIPSVLRSGLFQVGKEKYQTQT*WSTCSE
Trigger: TTCAGAGCATGTGCTCCAGCAAGTCTGAGTCTGATA...CTTCTCTTTACCCACCTGGAATAAGCCAGACCTAAGCACTGAAGGTATGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
3UTR-3UTR CCA 90 bp TATTGCAAGTCACGTCTTCCAGACTCCACCATCCATCAGAAGAGATTGCCTGGAGTATCTTGTTGTCCTTaGTTTCTGTGTGAAATAGAG +
Preference number: 2 (lower is better)
Translates to: YCKSRLPDSTIHQKRLPGVSCCP*FLCEIE
Trigger: CTCTATTTCACACAGAAACCAAGGACAACAAGATAC...TCCAGGCAATCTCTTCTGATGGATGGTGGAGTCTGGAAGACGTGACTTGCAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR TCA 90 bp CTAATGAACAGGTCTAGTAGCTGTTCCTTGGAAAAACCAGCATCTACTTCAGCTACCCAACTCAGTCTTTaGTTTACTGTTGCTGCATTC +
Preference number: 2 (lower is better)
Translates to: LMNRSSSCSLEKPASTSATQLSL*FTVAAF
Trigger: GAATGCAGCAACAGTAAATCAAAGACTGAGTTGGGT...AGCTGAAGTAGATGCTGGTTTTTCCAAGGAACAGCTACTAGACCTGTTCATTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR TCA 90 bp AAGGGTATTTTAAGAGCATTCAGATTCTCCAGCAAATGCTTGCAGTCATCAGTGTTTTATCAGCAGCATTaGCTTGGGCTTCTGCACTCA +
Preference number: 2 (lower is better)
Translates to: KGILRAFRFSSKCLQSSVFYQQH*LGLLHS
Trigger: TGAGTGCAGAAGCCCAAGTCAATGCTGCTGATAAAA...CACTGATGACTGCAAGCATTTGCTGGAGAATCTGAATGCTCTTAAAATACCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR CCA 90 bp ACAACAGGCTTGGATATGCCTTCAGGACTCTCTTCTCCTCCATCCAAGTCAAAGAACTACTTGAAAAGTTaGCATAACTTCCTGGTATTG +
Preference number: 2 (lower is better)
Translates to: TTGLDMPSGLSSPPSKSKNYLKS*HNFLVL
Trigger: CAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT...CTTTGACTTGGATGGAGGAGAAGAGAGTCCTGAAGGCATATCCAAGCCTGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR CCA 90 bp GGAAGAAAAGATTTAACTCTTGAAACACCCAACTCAGTCTTTGATTTACTGTTGCTGGCTTATTCCAGGTaGGTAAAGAGAAGCGGCCAG +
Preference number: 2 (lower is better)
Translates to: GRKDLTLETPNSVFDLLLLAYSR*VKRSGQ
Trigger: CTGGCCGCTTCTCTTTACCCACCTGGAATAAGCCAG...CAACAGTAAATCAAAGACTGAGTTGGGTGTTTCAAGAGTTAAATCTTTTCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
3UTR-3UTR CCA 90 bp TTTTTCATACCTTCAGTGCTTAGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGAGTCCATTTCCTTTTTaGAAAGTGCAGGGGCTTTCA +
Preference number: 2 (lower is better)
Translates to: FFIPSVLRSGLFQVGKEKSPFPF*KVQGLS
Trigger: TGAAAGCCCCTGCACTTTCCAAAAAGGAAATGGACT...CTTCTCTTTACCCACCTGGAATAAGCCAGACCTAAGCACTGAAGGTATGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR TCA 90 bp GGAACAGGAAGAAAAGATTTAACTCTTGAAACACCCAACTCAGTCTTTGATTTACTGGAGCACATGCTCTaGAGTTCCTTGACAAGATCT +
Preference number: 2 (lower is better)
Translates to: GTGRKDLTLETPNSVFDLLEHML*SSLTRS
Trigger: AGATCTTGTCAAGGAACTTCAGAGCATGTGCTCCAG...TAAATCAAAGACTGAGTTGGGTGTTTCAAGAGTTAAATCTTTTCTTCCTGTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
3UTR-3UTR GCA 90 bp AAAGATTTAACTCTTGAAACACCCAACTCAGTCTTTGATTTACTGTTGCTGCATTTTTCATACCTTCAGTaGTTAGGTCTGGCTTATTCC +
Preference number: 2 (lower is better)
Translates to: KDLTLETPNSVFDLLLLHFSYLQ*LGLAYS
Trigger: GGAATAAGCCAGACCTAAGCACTGAAGGTATGAAAA...ATGCAGCAACAGTAAATCAAAGACTGAGTTGGGTGTTTCAAGAGTTAAATCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
3UTR CAA 90 bp AAAAATCATCCCATGATGTCTGTTTGCGGATATTTAAAGCACATATaGTGTTTTCACATTCCAAGTCATCAGAACCATAGTTGCTTGGTT +
Preference number: 2 (lower is better)
Translates to: KNHPMMSVCGYLKHI*CFHIPSHQNHSCLV
Trigger: AACCAAGCAACTATGGTTCTGATGACTTGGAATGTGAAAACACAATATGTGCTTTAAATATCCGCAAACAGACATCATGGGATGATTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGTATCTTGTTGTCCTTaGTTTCTGTGTGAAATAGAG +
Preference number: 2 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEVSCCP*FLCEIE
Trigger: CTCTATTTCACACAGAAACCAAGGACAACAAGATAC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
3UTR GCA 72 bp TCGCCATCCCACCGCAGCTGCACCCAGCGGAAATGCTaGTGCACCAGCAAGTCGGAGCCCTGGAGACAGGCC +
Preference number: 3 (lower is better)
Translates to: SPSHRSCTQRKC*CTSKSEPWRQA
Trigger: GGCCTGTCTCCAGGGCTCCGACTTGCTGGTGCAGCAGCATTTCCGCTGGGTGCAGCTGCGGTGGGATGGCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR GCA 72 bp GGCTCGCCATCCCACCGCAGCTGCACCCAGCGGAAATaGTGCTGCACCAGCAAGTCGGAGCCCTGGAGACAG +
Preference number: 3 (lower is better)
Translates to: GSPSHRSCTQRK*CCTSKSEPWRQ
Trigger: CTGTCTCCAGGGCTCCGACTTGCTGGTGCAGCAGCATTTCCGCTGGGTGCAGCTGCGGTGGGATGGCGAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR GCA 72 bp AGCAGTCCTTGCATGGGCTCGCCATCCCACCGCAGCTaGACCCAGCGGAAATGCTGCTGCACCAGCAAGTCG +
Preference number: 3 (lower is better)
Translates to: SSPCMGSPSHRS*TQRKCCCTSKS
Trigger: CGACTTGCTGGTGCAGCAGCATTTCCGCTGGGTGCAGCTGCGGTGGGATGGCGAGCCCATGCAAGGACTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR TCA 72 bp TCAGGTGTGCCCAAGCGGGCCAGGCAGGAGTTAAGCTaGCGCCAGACGGACAGAGCCCAGTCGACAATCTTG +
Preference number: 3 (lower is better)
Translates to: SGVPKRARQELS*RQTDRAQSTIL
Trigger: CAAGATTGTCGACTGGGCTCTGTCCGTCTGGCGTCAGCTTAACTCCTGCCTGGCCCGCTTGGGCACACCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR CCA 72 bp CTTTCCTTCGTAAGAACCTCTGCAGCAGTCCTTGCATaGGCTCGCCATCCCACCGCAGCTGCACCCAGCGGA +
Preference number: 3 (lower is better)
Translates to: LSFVRTSAAVLA*ARHPTAAAPSG
Trigger: TCCGCTGGGTGCAGCTGCGGTGGGATGGCGAGCCCATGCAAGGACTGCTGCAGAGGTTCTTACGAAGGAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR CCA 72 bp CAGCGGAAATGCTGCTGCACCAGCAAGTCGGAGCCCTaGAGACAGGCCTTGGCGATGGTTCCCATCAGAAAG +
Preference number: 3 (lower is better)
Translates to: QRKCCCTSKSEP*RQALAMVPIRK
Trigger: CTTTCTGATGGGAACCATCGCCAAGGCCTGTCTCCAGGGCTCCGACTTGCTGGTGCAGCAGCATTTCCGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR GCA 72 bp ACAACTTTCCTTCGTAAGAACCTCTGCAGCAGTCCTTaGATGGGCTCGCCATCCCACCGCAGCTGCACCCAG +
Preference number: 3 (lower is better)
Translates to: TTFLRKNLCSSP*MGSPSHRSCTQ
Trigger: CTGGGTGCAGCTGCGGTGGGATGGCGAGCCCATGCAAGGACTGCTGCAGAGGTTCTTACGAAGGAAAGTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR CCA 72 bp GCTGCACCAGCAAGTCGGAGCCCTGGAGACAGGCCTTaGCGATGGTTCCCATCAGAAAGCAGTTCTCATGAA +
Preference number: 3 (lower is better)
Translates to: AAPASRSPGDRP*RWFPSESSSHE
Trigger: TTCATGAGAACTGCTTTCTGATGGGAACCATCGCCAAGGCCTGTCTCCAGGGCTCCGACTTGCTGGTGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR GCA 72 bp TATTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTaGGAGGACTGGTGTTCACCTTTCTCCAGGCACCAC +
Preference number: 3 (lower is better)
Translates to: YSRWVKRSGQTS*EDWCSPFSRHH
Trigger: GTGGTGCCTGGAGAAAGGTGAACACCAGTCCTCGCAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
3UTR CCA 72 bp GCAATGTGGGCAGCAGTCCAGCCTTCTCTGTTGGCGTaGTTAATGAGGTCTGCAGGAACAACAGGCTTGGAT +
Preference number: 3 (lower is better)
Translates to: AMWAAVQPSLLA*LMRSAGTTGLD
Trigger: ATCCAAGCCTGTTGTTCCTGCAGACCTCATTAACCACGCCAACAGAGAAGGCTGGACTGCTGCCCACATTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR GCA 72 bp TGCAGTCATCAGTGGCAACATCATGCACAGTCCGATTaGACTTGTCTCTCCTTTCTGGCTCAAGCCCTCCGT +
Preference number: 3 (lower is better)
Translates to: CSHQWQHHAQSD*TCLSFLAQALR
Trigger: ACGGAGGGCTTGAGCCAGAAAGGAGAGACAAGTGCAATCGGACTGTGCATGATGTTGCCACTGATGACTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR GCA 72 bp TGCTGGTCTAGCTCTGCTCTGGGGAGGGGACAGCCATaGAGTACAGCTTTATTTAGCAAGATGCTGAGAGCA +
Preference number: 3 (lower is better)
Translates to: CWSSSALGRGQP*STALFSKMLRA
Trigger: TGCTCTCAGCATCTTGCTAAATAAAGCTGTACTGCATGGCTGTCCCCTCCCCAGAGCAGAGCTAGACCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR CCA 72 bp TCATACCTTCAGTGCTTAGGTCTGGCTTATTCCAGGTaGGTAAAGAGAAGCGGCCAGACTTCCTGCGAGGAC +
Preference number: 3 (lower is better)
Translates to: SYLQCLGLAYSR*VKRSGQTSCED
Trigger: GTCCTCGCAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAATAAGCCAGACCTAAGCACTGAAGGTATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
3UTR-3UTR CAA 90 bp CTTTATTTCCATTTTTACAGGCCAGGTATAGAGGTGTCTGTCCTCCATCAGCAGTCCCTGGGCAGCAGCTaGCTGAAGAAGGGTGGGCCT +
Preference number: 3 (lower is better)
Translates to: LYFHFYRPGIEVSVLHQQSLGSS*LKKGGP
Trigger: AGGCCCACCCTTCTTCAGCAAGCTGCTGCCCAGGGA...CTGCTGATGGAGGACAGACACCTCTATACCTGGCCTGTAAAAATGGAAATAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR GCA 72 bp AAGCTTGAGGCTGTCCACATTACCAGTGTCCACAGCTaGGTGAACTGGTGTCCAGCCATCTGTGGTTTTTAC +
Preference number: 3 (lower is better)
Translates to: KLEAVHITSVHS*VNWCPAICGFY
Trigger: GTAAAAACCACAGATGGCTGGACACCAGTTCACGCAGCTGTGGACACTGGTAATGTGGACAGCCTCAAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR GCA 72 bp AGTCCAGCCTTCTCTGTTGGCGTGGTTAATGAGGTCTaGAGGAACAACAGGCTTGGATATGCCTTCAGGACT +
Preference number: 3 (lower is better)
Translates to: SPAFSVGVVNEV*RNNRLGYAFRT
Trigger: AGTCCTGAAGGCATATCCAAGCCTGTTGTTCCTGCAGACCTCATTAACCACGCCAACAGAGAAGGCTGGACT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR GCA 72 bp TTGAACTTATTCACAACTTTCCTTCGTAAGAACCTCTaGAGCAGTCCTTGCATGGGCTCGCCATCCCACCGC +
Preference number: 3 (lower is better)
Translates to: LNLFTTFLRKNL*SSPCMGSPSHR
Trigger: GCGGTGGGATGGCGAGCCCATGCAAGGACTGCTGCAGAGGTTCTTACGAAGGAAAGTTGTGAATAAGTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR CAA 90 bp TCTGGGTGCGATGACGCCATTCCACAGCTTAGACATCCACTTCACTGTCACTTGTCATGCACAGTCCGATaGCACTTGTCTCTCCTTTCT +
Preference number: 3 (lower is better)
Translates to: SGCDDAIPQLRHPLHCHLSCTVR*HLSLLS
Trigger: AGAAAGGAGAGACAAGTGCAATCGGACTGTGCATGA...CAAGTGACAGTGAAGTGGATGTCTAAGCTGTGGAATGGCGTCATCGCACCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR TCA 72 bp TTGAGGCTGTCCACATTACCAGTGTCCACAGCTGCGTaGACTGGTGTCCAGCCATCTGTGGTTTTTACACTT +
Preference number: 3 (lower is better)
Translates to: LRLSTLPVSTAA*TGVQPSVVFTL
Trigger: AAGTGTAAAAACCACAGATGGCTGGACACCAGTTCACGCAGCTGTGGACACTGGTAATGTGGACAGCCTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR GCA 72 bp TCCAGCAAATGCTTGCAGTCATCAGTGGCAACATCATaGACAGTCCGATTGCACTTGTCTCTCCTTTCTGGC +
Preference number: 3 (lower is better)
Translates to: SSKCLQSSVATS*TVRLHLSLLSG
Trigger: GCCAGAAAGGAGAGACAAGTGCAATCGGACTGTGCATGATGTTGCCACTGATGACTGCAAGCATTTGCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR GCA 72 bp TGCTGTCCTTGGCTAGGGTGTCTTTTAGCAGTTGTCTaGCCAAAGCCAGGTTGTCTTTTCACAGAGGCTCTT +
Preference number: 3 (lower is better)
Translates to: CCPWLGCLLAVV*PKPGCLFTEAL
Trigger: AAGAGCCTCTGTGAAAAGACAACCTGGCTTTGGGCAGACAACTGCTAAAAGACACCCTAGCCAAGGACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR CCA 72 bp TCTAGGCAGTTCTTAAAACCTTTGGAAGCAGCAATGTaGGCAGCAGTCCAGCCTTCTCTGTTGGCGTGGTTA +
Preference number: 3 (lower is better)
Translates to: SRQFLKPLEAAM*AAVQPSLLAWL
Trigger: TAACCACGCCAACAGAGAAGGCTGGACTGCTGCCCACATTGCTGCTTCCAAAGGTTTTAAGAACTGCCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR CAA 90 bp ACAACAGGCTTGGATATGCCTTCAGGACTCTCTTCTCCTCCATCCAAGTCAAAGTGGTACATAAGAAGCTaGAGGCTGTCCACATTACCA +
Preference number: 3 (lower is better)
Translates to: TTGLDMPSGLSSPPSKSKWYIRS*RLSTLP
Trigger: TGGTAATGTGGACAGCCTCAAGCTTCTTATGTACCA...CTTTGACTTGGATGGAGGAGAAGAGAGTCCTGAAGGCATATCCAAGCCTGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR CAA 90 bp TATTGCAAGTCACGTCTTCCAGACTCCACCATCCATCAGAAGAGATTGCCTGGACAGTTCTTAAAACCTTaGGAAGCAGCAATGTGGGCA +
Preference number: 3 (lower is better)
Translates to: YCKSRLPDSTIHQKRLPGQFLKP*EAAMWA
Trigger: TGCCCACATTGCTGCTTCCAAAGGTTTTAAGAACTG...TCCAGGCAATCTCTTCTGATGGATGGTGGAGTCTGGAAGACGTGACTTGCAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR CAA 90 bp AGAGCAGCTTTGACCACAGCCTGCTGTCCTTGGCTAGGGTGTCTTTTAGCAGTTATCCATCAGAAGAGATaGCCTGGAAATGATTTGTCA +
Preference number: 3 (lower is better)
Translates to: RAALTTACCPWLGCLLAVIHQKR*PGNDLS
Trigger: TGACAAATCATTTCCAGGCAATCTCTTCTGATGGAT...AACTGCTAAAAGACACCCTAGCCAAGGACAGCAGGCTGTGGTCAAAGCTGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR GCA 72 bp GAAGCCATTTTTATCAGCAGCATTGACTTGGGCTTCTaGACTCAGCAGCAATCTCACACAGTCTGTATGTCC +
Preference number: 3 (lower is better)
Translates to: EAIFISSIDLGF*TQQQSHTVCMS
Trigger: GGACATACAGACTGTGTGAGATTGCTGCTGAGTGCAGAAGCCCAAGTCAATGCTGCTGATAAAAATGGCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR GCA 72 bp TTGCACTTGTCTCTCCTTTCTGGCTCAAGCCCTCCGTaGCTACACAAGATTTCTAGGCAGTTCTTAAAACCT +
Preference number: 3 (lower is better)
Translates to: LHLSLLSGSSPP*LHKISRQFLKP
Trigger: AGGTTTTAAGAACTGCCTAGAAATCTTGTGTAGGCACGGAGGGCTTGAGCCAGAAAGGAGAGACAAGTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR GCA 72 bp ATCTACTTCAGCTCTCACTATTTCACAGGAGAATCCTaGAGCCATTTGTCTGTGCTTCAGGCAGAGTGCAAG +
Preference number: 3 (lower is better)
Translates to: IYFSSHYFTGES*SHLSVLQAECK
Trigger: CTTGCACTCTGCCTGAAGCACAGACAAATGGCTGCAGGATTCTCCTGTGAAATAGTGAGAGCTGAAGTAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR CCA 72 bp AAGGGTGTGAAGCCATTTTTATCAGCAGCATTGACTTaGGCTTCTGCACTCAGCAGCAATCTCACACAGTCT +
Preference number: 3 (lower is better)
Translates to: KGVKPFLSAALT*ASALSSNLTQS
Trigger: AGACTGTGTGAGATTGCTGCTGAGTGCAGAAGCCCAAGTCAATGCTGCTGATAAAAATGGCTTCACACCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR CCA 72 bp CATTCAGATTCTCCAGCAAATGCTTGCAGTCATCAGTaGCAACATCATGCACAGTCCGATTGCACTTGTCTC +
Preference number: 3 (lower is better)
Translates to: HSDSPANACSHQ*QHHAQSDCTCL
Trigger: GAGACAAGTGCAATCGGACTGTGCATGATGTTGCCACTGATGACTGCAAGCATTTGCTGGAGAATCTGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR CAA 90 bp AAGGGTATTTTAAGAGCATTCAGATTCTCCAGCAAATGCTTGCAGTCATCAGTGGTCCAGCCTTCTCTGTaGGCGTGGTTAATGAGGTCT +
Preference number: 3 (lower is better)
Translates to: KGILRAFRFSSKCLQSSVVQPSL*AWLMRS
Trigger: AGACCTCATTAACCACGCCAACAGAGAAGGCTGGAC...CACTGATGACTGCAAGCATTTGCTGGAGAATCTGAATGCTCTTAAAATACCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR TCA 72 bp TGTCTTTTCACAGAGGCTCTTGACAATATTGCTTCTTaGACTCTGGGTGCGATGACGCCATTCCACAGCTTA +
Preference number: 3 (lower is better)
Translates to: CLFTEALDNIAS*TLGAMTPFHSL
Trigger: TAAGCTGTGGAATGGCGTCATCGCACCCAGAGTTCAAGAAGCAATATTGTCAAGAGCCTCTGTGAAAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR GCA 72 bp CACAGCTTAGACATCCACTTCACTGTCACTTGGGCATaGCCAGGAACTACAGGACAAGACAGGAAATATTTT +
Preference number: 3 (lower is better)
Translates to: HSLDIHFTVTWA*PGTTGQDRKYF
Trigger: AAAATATTTCCTGTCTTGTCCTGTAGTTCCTGGGCATGCCCAAGTGACAGTGAAGTGGATGTCTAAGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR CCA 72 bp CTTGTATTACTGCTGCTGCTGCTTCTTTTGGTGTTCTaGGAACACTGGGTGACTTTACTTCTAGGAACAGGA +
Preference number: 3 (lower is better)
Translates to: LVLLLLLLLLVF*EHWVTLLLGTG
Trigger: TCCTGTTCCTAGAAGTAAAGTCACCCAGTGTTCCCAGAACACCAAAAGAAGCAGCAGCAGCAGTAATACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR CAA 90 bp CTTTATTTCCATTTTTACAGGCCAGGTATAGAGGTGTCTGTCCTCCATCAGCAGTTTTTATCAGCAGCATaGACTTGGGCTTCTGCACTC +
Preference number: 3 (lower is better)
Translates to: LYFHFYRPGIEVSVLHQQFLSAA*TWASAL
Trigger: GAGTGCAGAAGCCCAAGTCAATGCTGCTGATAAAAA...CTGCTGATGGAGGACAGACACCTCTATACCTGGCCTGTAAAAATGGAAATAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR CAA 90 bp TTTTTCATACCTTCAGTGCTTAGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGCAGAACCATAGTTGCTaGGTTCAATCTCACCCACTG +
Preference number: 3 (lower is better)
Translates to: FFIPSVLRSGLFQVGKEKQNHSC*VQSHPL
Trigger: CAGTGGGTGAGATTGAACCAAGCAACTATGGTTCTG...CTTCTCTTTACCCACCTGGAATAAGCCAGACCTAAGCACTGAAGGTATGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR TCA 72 bp AACTGGAAACTATGGATAAAGGGAAACTTCCTCCTTTaGAATCAGCTGTATGCTGGTCTAGCTCTGCTCTGG +
Preference number: 3 (lower is better)
Translates to: NWKLWIKGNFLL*NQLYAGLALLW
Trigger: CCAGAGCAGAGCTAGACCAGCATACAGCTGATTTCAAAGGAGGAAGTTTCCCTTTATCCATAGTTTCCAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR CAA 90 bp TTTTTCATACCTTCAGTGCTTAGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGCTGGAATCAGCAATCTaGCTGATATCAGACTCAGAC +
Preference number: 3 (lower is better)
Translates to: FFIPSVLRSGLFQVGKEKLESAI*LISDSD
Trigger: GTCTGAGTCTGATATCAGCAAGATTGCTGATTCCAG...CTTCTCTTTACCCACCTGGAATAAGCCAGACCTAAGCACTGAAGGTATGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
3UTR TCA 72 bp AGATCTGCTTCGTCATCTGAACCCAGAGAGAGTCTCTaGTCCAAATTCAACGTCAGTGATAGATCATTCTCT +
Preference number: 3 (lower is better)
Translates to: RSASSSEPRESL*SKFNVSDRSFS
Trigger: AGAGAATGATCTATCACTGACGTTGAATTTGGATCAGAGACTCTCTCTGGGTTCAGATGACGAAGCAGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
3UTR TCA 72 bp CTTGACTCGGACTCCTCCTCATTGAAAGAATTTCCATaGGCTGGTATTCTATGGTACATAAGAAGCTTGAGG +
Preference number: 3 (lower is better)
Translates to: LDSDSSSLKEFP*AGILWYIRSLR
Trigger: CCTCAAGCTTCTTATGTACCATAGAATACCAGCTCATGGAAATTCTTTCAATGAGGAGGAGTCCGAGTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR GCA 72 bp AAGGGTATTTTAAGAGCATTCAGATTCTCCAGCAAATaGTTGCAGTCATCAGTGGCAACATCATGCACAGTC +
Preference number: 3 (lower is better)
Translates to: KGILRAFRFSSK*LQSSVATSCTV
Trigger: GACTGTGCATGATGTTGCCACTGATGACTGCAAGCATTTGCTGGAGAATCTGAATGCTCTTAAAATACCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR TCA 72 bp TATGAAATTAATAATTCTACACACTCGAAATGTCCCTaGGCAGCTGCAGCACACAAGGGTGTGAAGCCATTT +
Preference number: 3 (lower is better)
Translates to: YEINNSTHSKCP*AAAAHKGVKPF
Trigger: AAATGGCTTCACACCCTTGTGTGCTGCAGCTGCTCAGGGACATTTCGAGTGTGTAGAATTATTAATTTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR CCA 72 bp AAGCTGATGTACTATGTAGTCTTGCAAGCTTCCTTCTaGGCCGTGGAAAATGACATTATGATATTGCTCAAC +
Preference number: 3 (lower is better)
Translates to: KLMYYVVLQASF*AVENDIMILLN
Trigger: GTTGAGCAATATCATAATGTCATTTTCCACGGCCCAGAAGGAAGCTTGCAAGACTACATAGTACATCAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR CAA 90 bp CTTTATTTCCATTTTTACAGGCCAGGTATAGAGGTGTCTGTCCTCCATCAGCAGAAAGGTATTTGTATCTaGTTGTCCTTGGTTTCTGTG +
Preference number: 3 (lower is better)
Translates to: LYFHFYRPGIEVSVLHQQKGICI*LSLVSV
Trigger: CACAGAAACCAAGGACAACAAGATACAAATACCTTT...CTGCTGATGGAGGACAGACACCTCTATACCTGGCCTGTAAAAATGGAAATAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR CAA 90 bp TGGGAACACTGGGTGACTTTACTTCTAGGAACAGGAAGAAAAGATTTAACTCTTCACCCAACTCAGTCTTaGATTTACTGTTGCTGCATT +
Preference number: 3 (lower is better)
Translates to: WEHWVTLLLGTGRKDLTLHPTQS*IYCCCI
Trigger: AATGCAGCAACAGTAAATCAAAGACTGAGTTGGGTG...AAGAGTTAAATCTTTTCTTCCTGTTCCTAGAAGTAAAGTCACCCAGTGTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
3UTR GCA 72 bp TTGTGTTTTCACATTCCAAGTCATCAGAACCATAGTTaGTTGGTTCAATCTCACCCACTGAAATCCTTAAGG +
Preference number: 3 (lower is better)
Translates to: LCFHIPSHQNHS*LVQSHPLKSLR
Trigger: CCTTAAGGATTTCAGTGGGTGAGATTGAACCAAGCAACTATGGTTCTGATGACTTGGAATGTGAAAACACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR TCA 72 bp GCCAGGTATAGAGGTGTCTGTCCTCCATCAGCAGCATaGTTAATGTTAGCATCATATGAAATTAATAATTCT +
Preference number: 3 (lower is better)
Translates to: ARYRGVCPPSAA*LMLASYEINNS
Trigger: AGAATTATTAATTTCATATGATGCTAACATTAATCATGCTGCTGATGGAGGACAGACACCTCTATACCTGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAAAAGGTATTTGTATCTaGTTGTCCTTGGTTTCTGTG +
Preference number: 3 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEKGICI*LSLVSV
Trigger: CACAGAAACCAAGGACAACAAGATACAAATACCTTT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR TCA 90 bp GCAAGTCGGAGCCCTGGAGACAGGCCTTGGCGATGGTTCCCATCAGAAAGCAGTAGACGTGGCCAGGGCTaGAACGGCACAGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: ASRSPGDRPWRWFPSESSRRGQG*NGTACR
Trigger: CCTGCAGGCTGTGCCGTTTCAGCCCTGGCCACGTCT...ACTGCTTTCTGATGGGAACCATCGCCAAGGCCTGTCTCCAGGGCTCCGACTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp CTCGCCATCCCACCGCAGCTGCACCCAGCGGAAATGCTGCTGCACCAGCAAGTCGCAGTGGGCCATGACTaGTTCAAGGATGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: LAIPPQLHPAEMLLHQQVAVGHD*FKDGEG
Trigger: CCCCTCTCCATCCTTGAAGCAGTCATGGCCCACTGC...GACTTGCTGGTGCAGCAGCATTTCCGCTGGGTGCAGCTGCGGTGGGATGGCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp GCCAGACGGACAGAGCCCAGTCGACAATCTTGCACACAGGATCGCAGGGGGAGGTGCACCCAGCGGAAATaGTGCTGCACCAGCAAGTCG +
Preference number: 4 (lower is better)
Translates to: ARRTEPSRQSCTQDRRGRCTQRK*CCTSKS
Trigger: CGACTTGCTGGTGCAGCAGCATTTCCGCTGGGTGCA...CCTCCCCCTGCGATCCTGTGTGCAAGATTGTCGACTGGGCTCTGTCCGTCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp GCAAGTCGGAGCCCTGGAGACAGGCCTTGGCGATGGTTCCCATCAGAAAGCAGTCTGGTCTGGCCATGGTaGCACTGGTGCACACGCTCC +
Preference number: 4 (lower is better)
Translates to: ASRSPGDRPWRWFPSESSLVWPW*HWCTRS
Trigger: GGAGCGTGTGCACCAGTGCCACCATGGCCAGACCAG...ACTGCTTTCTGATGGGAACCATCGCCAAGGCCTGTCTCCAGGGCTCCGACTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp CTCGCCATCCCACCGCAGCTGCACCCAGCGGAAATGCTGCTGCACCAGCAAGTCTGTCAATACCTGGTCTaGCCATGGTGGCACTGGTGC +
Preference number: 4 (lower is better)
Translates to: LAIPPQLHPAEMLLHQQVCQYLV*PWWHWC
Trigger: GCACCAGTGCCACCATGGCCAGACCAGGTATTGACA...GACTTGCTGGTGCAGCAGCATTTCCGCTGGGTGCAGCTGCGGTGGGATGGCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp CTCGCCATCCCACCGCAGCTGCACCCAGCGGAAATGCTGCTGCACCAGCAAGTCGTTTGCACTTGGAGGTaGGAAAGCGGGTACAGAAGC +
Preference number: 4 (lower is better)
Translates to: LAIPPQLHPAEMLLHQQVVCTWR*ESGYRS
Trigger: GCTTCTGTACCCGCTTTCCCACCTCCAAGTGCAAAC...GACTTGCTGGTGCAGCAGCATTTCCGCTGGGTGCAGCTGCGGTGGGATGGCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp GCCAGACGGACAGAGCCCAGTCGACAATCTTGCACACAGGATCGCAGGGGGAGGAGCGTTACTGGGAAGTaGGGGTGTGCTACTGGTTGG +
Preference number: 4 (lower is better)
Translates to: ARRTEPSRQSCTQDRRGRSVTGK*GCATGW
Trigger: CCAACCAGTAGCACACCCCCACTTCCCAGTAACGCT...CCTCCCCCTGCGATCCTGTGTGCAAGATTGTCGACTGGGCTCTGTCCGTCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp CTCGCCATCCCACCGCAGCTGCACCCAGCGGAAATGCTGCTGCACCAGCAAGTCATCTGCTTCGTCATCTaGACCCAGAGAGAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: LAIPPQLHPAEMLLHQQVICFVI*TQRESL
Trigger: CAGAGACTCTCTCTGGGTTCAGATGACGAAGCAGAT...GACTTGCTGGTGCAGCAGCATTTCCGCTGGGTGCAGCTGCGGTGGGATGGCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp TGGGTAAAGAGAAGCGGCCAGACTTCCTGCGAGGACTGGTGTTCACCTTTCTCCGAAGTGCTTCAGGTGTaGCCAAGCGGGCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: WVKRSGQTSCEDWCSPFSEVLQV*PSGPGR
Trigger: CCTGCCTGGCCCGCTTGGGCACACCTGAAGCACTTC...GGAGAAAGGTGAACACCAGTCCTCGCAGGAAGTCTGGCCGCTTCTCTTTACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
CDS-3UTR TCA 90 bp AGAAGCGGCCAGACTTCCTGCGAGGACTGGTGTTCACCTTTCTCCAGGCACCACTCTGGGCCTCCTCTATaGCTTTGCCTGAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: RSGQTSCEDWCSPFSRHHSGPPL*LCLRAA
Trigger: AGCAGCTCTCAGGCAAAGTCATAGAGGAGGCCCAGA...GTGGTGCCTGGAGAAAGGTGAACACCAGTCCTCGCAGGAAGTCTGGCCGCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp AGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTGCGAGGACAACTGGAGGGTGGGTaGCAACATCCCCTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: RSGLFQVGKEKRPDFLRGQLEGG*QHPLLG
Trigger: CCCCAACAGGGGATGTTGGCACCCACCCTCCAGTTG...TCCTCGCAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAATAAGCCAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp CTTAGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTGCGAGCAGCAGTCCTTGCATaGGCTCGCCATCCCACCGCA +
Preference number: 4 (lower is better)
Translates to: LRSGLFQVGKEKRPDFLRAAVLA*ARHPTA
Trigger: TGCGGTGGGATGGCGAGCCCATGCAAGGACTGCTGC...TCGCAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAATAAGCCAGACCTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp GCCAGACTTCCTGCGAGGACTGGTGTTCACCTTTCTCCAGGCACCACTCTCTCCGAGGGAGCACCTGCTTaGGGGCTTGTAAATCTTGAC +
Preference number: 4 (lower is better)
Translates to: ARLPARTGVHLSPGTTLSEGAPA*GLVNLD
Trigger: GTCAAGATTTACAAGCCCTCAAGCAGGTGCTCCCTC...GGAGAGAGTGGTGCCTGGAGAAAGGTGAACACCAGTCCTCGCAGGAAGTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp CCAGCAAATGCTTGCAGTCATCAGTGGCAACATCATGCACAGTCCGATTGCACTGGGCACTCCAGGCCTTaGGGGAGCACCTGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: PANACSHQWQHHAQSDCTGHSRP*GSTCLR
Trigger: CCTCAAGCAGGTGCTCCCTCAAGGCCTGGAGTGCCC...AGTGCAATCGGACTGTGCATGATGTTGCCACTGATGACTGCAAGCATTTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp GCCAGACGGACAGAGCCCAGTCGACAATCTTGCACACAGGATCGCAGGGGGAGGGGGTTTAGACCTGGATaGAAAGAGGTGTTGGCACAT +
Preference number: 4 (lower is better)
Translates to: ARRTEPSRQSCTQDRRGRGFRPG*KEVLAH
Trigger: ATGTGCCAACACCTCTTTGCATCCAGGTCTAAACCC...CCTCCCCCTGCGATCCTGTGTGCAAGATTGTCGACTGGGCTCTGTCCGTCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp GCCAGACGGACAGAGCCCAGTCGACAATCTTGCACACAGGATCGCAGGGGGAGGGTGGTTAATGAGGTCTaGAGGAACAACAGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: ARRTEPSRQSCTQDRRGRVVNEV*RNNRLG
Trigger: TCCAAGCCTGTTGTTCCTGCAGACCTCATTAACCAC...CCTCCCCCTGCGATCCTGTGTGCAAGATTGTCGACTGGGCTCTGTCCGTCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp TTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTGCGAGGACTGGTGTTCACCCCTGGAGACAGGCCTTaGCGATGGTTCCCATCAGAA +
Preference number: 4 (lower is better)
Translates to: FQVGKEKRPDFLRGLVFTPGDRP*RWFPSE
Trigger: TTCTGATGGGAACCATCGCCAAGGCCTGTCTCCAGG...GGTGAACACCAGTCCTCGCAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp GCCAGACTTCCTGCGAGGACTGGTGTTCACCTTTCTCCAGGCACCACTCTCTCCACTTCCTGCGAGGACTaGTGTTCACCTTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ARLPARTGVHLSPGTTLSTSCED*CSPFSR
Trigger: CCTGGAGAAAGGTGAACACCAGTCCTCGCAGGAAGT...GGAGAGAGTGGTGCCTGGAGAAAGGTGAACACCAGTCCTCGCAGGAAGTCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
CDS-3UTR CCA 90 bp AGAAGCGGCCAGACTTCCTGCGAGGACTGGTGTTCACCTTTCTCCAGGCACCACACTTCCTGCGAGGACTaGTGTTCACCTTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RSGQTSCEDWCSPFSRHHTSCED*CSPFSR
Trigger: CCTGGAGAAAGGTGAACACCAGTCCTCGCAGGAAGT...GTGGTGCCTGGAGAAAGGTGAACACCAGTCCTCGCAGGAAGTCTGGCCGCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
CDS-3UTR CCA 90 bp GCCAGACTTCCTGCGAGGACTGGTGTTCACCTTTCTCCAGGCACCACTCTCTCCCTGGCTTATTCCAGGTaGGTAAAGAGAAGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: ARLPARTGVHLSPGTTLSLAYSR*VKRSGQ
Trigger: CTGGCCGCTTCTCTTTACCCACCTGGAATAAGCCAG...GGAGAGAGTGGTGCCTGGAGAAAGGTGAACACCAGTCCTCGCAGGAAGTCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
CDS-3UTR TCA 90 bp AGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTGCGAGGAGGAGCTTGCGAGTTCTaGGGAGCTATGCCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: RSGLFQVGKEKRPDFLRGGACEF*GAMPGV
Trigger: AACACCAGGCATAGCTCCTCAGAACTCGCAAGCTCC...TCCTCGCAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAATAAGCCAGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp GCCAGACGGACAGAGCCCAGTCGACAATCTTGCACACAGGATCGCAGGGGGAGGGCATTGATAATAAAGTaGCATTTCCCTGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: ARRTEPSRQSCTQDRRGRALIIK*HFPGQQ
Trigger: CTGCTGCCCAGGGAAATGTCACTTTATTATCAATGC...CCTCCCCCTGCGATCCTGTGTGCAAGATTGTCGACTGGGCTCTGTCCGTCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp GCAAGTCGGAGCCCTGGAGACAGGCCTTGGCGATGGTTCCCATCAGAAAGCAGTGCCTTCTTGAGGACCTaGCAAAAGCACAGTGATGTG +
Preference number: 4 (lower is better)
Translates to: ASRSPGDRPWRWFPSESSAFLRT*QKHSDV
Trigger: CACATCACTGTGCTTTTGTCAGGTCCTCAAGAAGGC...ACTGCTTTCTGATGGGAACCATCGCCAAGGCCTGTCTCCAGGGCTCCGACTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp GCAAGTCGGAGCCCTGGAGACAGGCCTTGGCGATGGTTCCCATCAGAAAGCAGTCTGCATTCAGTAGTTTaGTGGCTGCTGAGAGGACTG +
Preference number: 4 (lower is better)
Translates to: ASRSPGDRPWRWFPSESSLHSVV*WLLRGL
Trigger: CAGTCCTCTCAGCAGCCATCAAACTACTGAATGCAG...ACTGCTTTCTGATGGGAACCATCGCCAAGGCCTGTCTCCAGGGCTCCGACTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp TTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTGCGAGGACTGGTGTTCACCGAGGTCAGTGGTGTGTaGTTCTTCCCGGTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: FQVGKEKRPDFLRGLVFTEVSGV*FFPVQL
Trigger: AAGCTGAACCGGGAAGAAGCACACACCACTGACCTC...GGTGAACACCAGTCCTCGCAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp AGAAGCGGCCAGACTTCCTGCGAGGACTGGTGTTCACCTTTCTCCAGGCACCACACTGTCACTTGGGCATaGCCAGGAACTACAGGACAA +
Preference number: 4 (lower is better)
Translates to: RSGQTSCEDWCSPFSRHHTVTWA*PGTTGQ
Trigger: TTGTCCTGTAGTTCCTGGGCATGCCCAAGTGACAGT...GTGGTGCCTGGAGAAAGGTGAACACCAGTCCTCGCAGGAAGTCTGGCCGCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
CDS-3UTR GCA 90 bp GTGCTTAGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTGAGCGGCCAGACTTCCTaGGAGGACTGGTGTTCACCT +
Preference number: 4 (lower is better)
Translates to: VLRSGLFQVGKEKRPDFLSGQTS*EDWCSP
Trigger: AGGTGAACACCAGTCCTCGCAGGAAGTCTGGCCGCT...CAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAATAAGCCAGACCTAAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
CDS-3UTR CCA 90 bp GCCAGACGGACAGAGCCCAGTCGACAATCTTGCACACAGGATCGCAGGGGGAGGTTTCCTCTTCCAGTTTaGCCATTACGTCTTCGAGCT +
Preference number: 4 (lower is better)
Translates to: ARRTEPSRQSCTQDRRGRFPLPV*PLRLRA
Trigger: AGCTCGAAGACGTAATGGCCAAACTGGAAGAGGAAA...CCTCCCCCTGCGATCCTGTGTGCAAGATTGTCGACTGGGCTCTGTCCGTCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp CTGGAGAGGGATCATGGAGGCATAAGTCACACTACTGAGACAGCCTTCTTGAGGGAGGGGCAGCGTTACTaGGAAGTGGGGGTGTGCTAC +
Preference number: 4 (lower is better)
Translates to: LERDHGGISHTTETAFLREGQRY*EVGVCY
Trigger: GTAGCACACCCCCACTTCCCAGTAACGCTGCCCCTC...CCTCAAGAAGGCTGTCTCAGTAGTGTGACTTATGCCTCCATGATCCCTCTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR CAA 72 bp GAAGCAGCAATGTGGGCAGCAGTCCAGCCTTCTCTGTaGGCGTGGTTAATGAGGTCTGCAGGAACAACAGGC +
Preference number: 4 (lower is better)
Translates to: EAAMWAAVQPSL*AWLMRSAGTTG
Trigger: GCCTGTTGTTCCTGCAGACCTCATTAACCACGCCAACAGAGAAGGCTGGACTGCTGCCCACATTGCTGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp CCAGCAAATGCTTGCAGTCATCAGTGGCAACATCATGCACAGTCCGATTGCACTTACCTGGTCTGGCCATaGTGGCACTGGTGCACACGC +
Preference number: 4 (lower is better)
Translates to: PANACSHQWQHHAQSDCTYLVWP*WHWCTR
Trigger: GCGTGTGCACCAGTGCCACCATGGCCAGACCAGGTA...AGTGCAATCGGACTGTGCATGATGTTGCCACTGATGACTGCAAGCATTTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp AGAAGCGGCCAGACTTCCTGCGAGGACTGGTGTTCACCTTTCTCCAGGCACCACCATGAGTCTTTAAACTaGTCCGACCAACTGGAGGGT +
Preference number: 4 (lower is better)
Translates to: RSGQTSCEDWCSPFSRHHHESLN*SDQLEG
Trigger: ACCCTCCAGTTGGTCGGACCAGTTTAAAGACTCATG...GTGGTGCCTGGAGAAAGGTGAACACCAGTCCTCGCAGGAAGTCTGGCCGCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp AGAAGCGGCCAGACTTCCTGCGAGGACTGGTGTTCACCTTTCTCCAGGCACCACCAGACTCAGACTTGCTaGAGCACATGCTCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: RSGQTSCEDWCSPFSRHHQTQTC*STCSEV
Trigger: AACTTCAGAGCATGTGCTCCAGCAAGTCTGAGTCTG...GTGGTGCCTGGAGAAAGGTGAACACCAGTCCTCGCAGGAAGTCTGGCCGCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
CDS-3UTR TCA 90 bp TTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTGCGAGGACTGGTGTTCACCCTCTATGACTTTGCCTaGGAGCTGCTTGCACTCTTT +
Preference number: 4 (lower is better)
Translates to: FQVGKEKRPDFLRGLVFTLYDFA*ELLALF
Trigger: AAAGAGTGCAAGCAGCTCTCAGGCAAAGTCATAGAG...GGTGAACACCAGTCCTCGCAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp GCAAGTCGGAGCCCTGGAGACAGGCCTTGGCGATGGTTCCCATCAGAAAGCAGTTTTTATCAGCAGCATTaGCTTGGGCTTCTGCACTCA +
Preference number: 4 (lower is better)
Translates to: ASRSPGDRPWRWFPSESSFYQQH*LGLLHS
Trigger: TGAGTGCAGAAGCCCAAGTCAATGCTGCTGATAAAA...ACTGCTTTCTGATGGGAACCATCGCCAAGGCCTGTCTCCAGGGCTCCGACTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp TCAGAGACTTGCACAATCCTGGCTTCATCACTTGCTAGATGCATGACTTTGAGCGACTGCGCGAAGCTCTaGCCCACTGACCACGGCACA +
Preference number: 4 (lower is better)
Translates to: SETCTILASSLARCMTLSDCAKL*PTDHGT
Trigger: TGTGCCGTGGTCAGTGGGTCAGAGCTTCGCGCAGTC...GCTCAAAGTCATGCATCTAGCAAGTGATGAAGCCAGGATTGTGCAAGTCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416239.1
CDS-3UTR TCA 90 bp TTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTGCGAGGACTGGTGTTCACCATTGCTCAACCAGCCTaGGGTAGTTCTGCATCATCT +
Preference number: 4 (lower is better)
Translates to: FQVGKEKRPDFLRGLVFTIAQPA*GSSASS
Trigger: AGATGATGCAGAACTACCTCAGGCTGGTTGAGCAAT...GGTGAACACCAGTCCTCGCAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp AGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTGCGAGGAATCTGCTTCGTCATCTaGACCCAGAGAGAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: RSGLFQVGKEKRPDFLRGICFVI*TQRESL
Trigger: CAGAGACTCTCTCTGGGTTCAGATGACGAAGCAGAT...TCCTCGCAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAATAAGCCAGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
CDS-3UTR GCA 90 bp TGGGTAAAGAGAAGCGGCCAGACTTCCTGCGAGGACTGGTGTTCACCTTTCTCCGGATCGTATGCTTCTTaGACTGAGGCCGATGTTGGA +
Preference number: 4 (lower is better)
Translates to: WVKRSGQTSCEDWCSPFSGSYAS*TEADVG
Trigger: TCCAACATCGGCCTCAGTGCAAGAAGCATACGATCC...GGAGAAAGGTGAACACCAGTCCTCGCAGGAAGTCTGGCCGCTTCTCTTTACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp TGGGTAAAGAGAAGCGGCCAGACTTCCTGCGAGGACTGGTGTTCACCTTTCTCCTGCAGGGGCTTTCAGTaGTGCGATTTTCAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: WVKRSGQTSCEDWCSPFSCRGFQ*CDFQEV
Trigger: CACCTCTTGAAAATCGCAGCACTGAAAGCCCCTGCA...GGAGAAAGGTGAACACCAGTCCTCGCAGGAAGTCTGGCCGCTTCTCTTTACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp TATTGCAAGTCACGTCTTCCAGACTCCACCATCCATCAGAAGAGATTGCCTGGACTCTGCAGCAGTCCTTaGATGGGCTCGCCATCCCAC +
Preference number: 4 (lower is better)
Translates to: YCKSRLPDSTIHQKRLPGLCSSP*MGSPSH
Trigger: GTGGGATGGCGAGCCCATGCAAGGACTGCTGCAGAG...TCCAGGCAATCTCTTCTGATGGATGGTGGAGTCTGGAAGACGTGACTTGCAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp TTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTGCGAGGACTGGTGTTCACCTTTTGTTATCAACTTTaGCCCCTGTGTTCGAGGCCC +
Preference number: 4 (lower is better)
Translates to: FQVGKEKRPDFLRGLVFTFCYQL*PLCSRP
Trigger: GGGCCTCGAACACAGGGGCCAAAGTTGATAACAAAA...GGTGAACACCAGTCCTCGCAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp CTCGCCATCCCACCGCAGCTGCACCCAGCGGAAATGCTGCTGCACCAGCAAGTCTTTTTACACTTCGATTaGTTCCAGCTTCCAACAAGA +
Preference number: 4 (lower is better)
Translates to: LAIPPQLHPAEMLLHQQVFLHFD*FQLPTR
Trigger: TCTTGTTGGAAGCTGGAACCAATCGAAGTGTAAAAA...GACTTGCTGGTGCAGCAGCATTTCCGCTGGGTGCAGCTGCGGTGGGATGGCGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp TGGGTAAAGAGAAGCGGCCAGACTTCCTGCGAGGACTGGTGTTCACCTTTCTCCACAGCCTGCTGTCCTTaGCTAGGGTGTCTTTTAGCA +
Preference number: 4 (lower is better)
Translates to: WVKRSGQTSCEDWCSPFSTACCP*LGCLLA
Trigger: TGCTAAAAGACACCCTAGCCAAGGACAGCAGGCTGT...GGAGAAAGGTGAACACCAGTCCTCGCAGGAAGTCTGGCCGCTTCTCTTTACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp GATTGCACTTGTCTCTCCTTTCTGGCTCAAGCCCTCCGTGCCTACACAAGATTTGCTGCTTGCACTCTTTaGCCAGCATCAGGACCACCT +
Preference number: 4 (lower is better)
Translates to: DCTCLSFLAQALRAYTRFAACTL*PASGPP
Trigger: AGGTGGTCCTGATGCTGGTCAAAGAGTGCAAGCAGC...AAATCTTGTGTAGGCACGGAGGGCTTGAGCCAGAAAGGAGAGACAAGTGCAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp TCTGGGTGCGATGACGCCATTCCACAGCTTAGACATCCACTTCACTGTCACTTGGGTTGGATCTGGTGTTaGGCCAGTGCTTGGTCCATT +
Preference number: 4 (lower is better)
Translates to: SGCDDAIPQLRHPLHCHLGWIWC*ASAWSI
Trigger: AATGGACCAAGCACTGGCTCAACACCAGATCCAACC...CAAGTGACAGTGAAGTGGATGTCTAAGCTGTGGAATGGCGTCATCGCACCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp TGGGTAAAGAGAAGCGGCCAGACTTCCTGCGAGGACTGGTGTTCACCTTTCTCCCAGCACACAAGGGTGTaGAGCCATTTTTATCAGCAG +
Preference number: 4 (lower is better)
Translates to: WVKRSGQTSCEDWCSPFSQHTRV*SHFYQQ
Trigger: CTGCTGATAAAAATGGCTTCACACCCTTGTGTGCTG...GGAGAAAGGTGAACACCAGTCCTCGCAGGAAGTCTGGCCGCTTCTCTTTACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp GCCAGACGGACAGAGCCCAGTCGACAATCTTGCACACAGGATCGCAGGGGGAGGTTGAAAGAATTTCCATaGGCTGGTATTCTATGGTAC +
Preference number: 4 (lower is better)
Translates to: ARRTEPSRQSCTQDRRGRLKEFP*AGILWY
Trigger: GTACCATAGAATACCAGCTCATGGAAATTCTTTCAA...CCTCCCCCTGCGATCCTGTGTGCAAGATTGTCGACTGGGCTCTGTCCGTCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp AGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTGCGAGGAAGGGCGCCTGACCTTTaGACTTATTCACAACTTTCC +
Preference number: 4 (lower is better)
Translates to: RSGLFQVGKEKRPDFLRGRAPDL*TYSQLS
Trigger: GGAAAGTTGTGAATAAGTTCAAAGGTCAGGCGCCCT...TCCTCGCAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAATAAGCCAGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp GCTGGTATTCTATGGTACATAAGAAGCTTGAGGCTGTCCACATTACCAGTGTCCAGGCAGGAGTTAAGCTaGCGCCAGACGGACAGAGCC +
Preference number: 4 (lower is better)
Translates to: AGILWYIRSLRLSTLPVSRQELS*RQTDRA
Trigger: GGCTCTGTCCGTCTGGCGTCAGCTTAACTCCTGCCT...GGACACTGGTAATGTGGACAGCCTCAAGCTTCTTATGTACCATAGAATACCAGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp AGAGCAGCTTTGACCACAGCCTGCTGTCCTTGGCTAGGGTGTCTTTTAGCAGTTAGCATCAGGACCACCTaGTTGTTCTTGCCACGCTCT +
Preference number: 4 (lower is better)
Translates to: RAALTTACCPWLGCLLAVSIRTT*LFLPRS
Trigger: AGAGCGTGGCAAGAACAAGCAGGTGGTCCTGATGCT...AACTGCTAAAAGACACCCTAGCCAAGGACAGCAGGCTGTGGTCAAAGCTGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp TTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTGCGAGGACTGGTGTTCACCGTGCTTCAGGCAGAGTaGAAGCTGATGTACTATGTA +
Preference number: 4 (lower is better)
Translates to: FQVGKEKRPDFLRGLVFTVLQAE*KLMYYV
Trigger: TACATAGTACATCAGCTTGCACTCTGCCTGAAGCAC...GGTGAACACCAGTCCTCGCAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp CATGCCCAGGAACTACAGGACAAGACAGGAAATATTTTGGTCCAAGAAGTGCTTGAAGTGCTTCAGGTGTaGCCAAGCGGGCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: HAQELQDKTGNILVQEVLEVLQV*PSGPGR
Trigger: CCTGCCTGGCCCGCTTGGGCACACCTGAAGCACTTC...AAGCACTTCTTGGACCAAAATATTTCCTGTCTTGTCCTGTAGTTCCTGGGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp CTTAGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTGCGATTCTTGAACTCTGGGTaGGATGACGCCATTCCACAG +
Preference number: 4 (lower is better)
Translates to: LRSGLFQVGKEKRPDFLRFLNSG*DDAIPQ
Trigger: CTGTGGAATGGCGTCATCGCACCCAGAGTTCAAGAA...TCGCAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAATAAGCCAGACCTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp AGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTGCGAGGAGGGGTTGGTACAAACTaGCTTCTTCTCTTTGTCACC +
Preference number: 4 (lower is better)
Translates to: RSGLFQVGKEKRPDFLRGGVGTN*LLLFVT
Trigger: GGTGACAAAGAGAAGAAGCCAGTTTGTACCAACCCC...TCCTCGCAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAATAAGCCAGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp TCTGGGTGCGATGACGCCATTCCACAGCTTAGACATCCACTTCACTGTCACTTGCTAGGGGACTCCCTGTaGAAGGTTTTACAGGCATGG +
Preference number: 4 (lower is better)
Translates to: SGCDDAIPQLRHPLHCHLLGDSL*KVLQAW
Trigger: CCATGCCTGTAAAACCTTCCACAGGGAGTCCCCTAG...CAAGTGACAGTGAAGTGGATGTCTAAGCTGTGGAATGGCGTCATCGCACCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp CTGGAGAGGGATCATGGAGGCATAAGTCACACTACTGAGACAGCCTTCTTGAGGCACCCTGTTCCCTTGTaGCAAACTGGAAGGAGTCGA +
Preference number: 4 (lower is better)
Translates to: LERDHGGISHTTETAFLRHPVPL*QTGRSR
Trigger: TCGACTCCTTCCAGTTTGCCACAAGGGAACAGGGTG...CCTCAAGAAGGCTGTCTCAGTAGTGTGACTTATGCCTCCATGATCCCTCTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp AGAGCAGCTTTGACCACAGCCTGCTGTCCTTGGCTAGGGTGTCTTTTAGCAGTTTCAGCAGCATTGACTTaGGCTTCTGCACTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RAALTTACCPWLGCLLAVSAALT*ASALSS
Trigger: GCTGCTGAGTGCAGAAGCCCAAGTCAATGCTGCTGA...AACTGCTAAAAGACACCCTAGCCAAGGACAGCAGGCTGTGGTCAAAGCTGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp TTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTGCGAGGACTGGTGTTCACCGTGTCCAGCCATCTGTaGTTTTTACACTTCGATTGG +
Preference number: 4 (lower is better)
Translates to: FQVGKEKRPDFLRGLVFTVSSHL*FLHFDW
Trigger: CCAATCGAAGTGTAAAAACCACAGATGGCTGGACAC...GGTGAACACCAGTCCTCGCAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp CCAGCAAATGCTTGCAGTCATCAGTGGCAACATCATGCACAGTCCGATTGCACTCACAGCTGCGTGAACTaGTGTCCAGCCATCTGTGGT +
Preference number: 4 (lower is better)
Translates to: PANACSHQWQHHAQSDCTHSCVN*CPAICG
Trigger: ACCACAGATGGCTGGACACCAGTTCACGCAGCTGTG...AGTGCAATCGGACTGTGCATGATGTTGCCACTGATGACTGCAAGCATTTGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp GTGCTTAGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTGGCTTTCACTGTCACTTaGGCATGCCCAGGAACTACA +
Preference number: 4 (lower is better)
Translates to: VLRSGLFQVGKEKRPDFLAFTVT*ACPGTT
Trigger: TGTAGTTCCTGGGCATGCCCAAGTGACAGTGAAAGC...CAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAATAAGCCAGACCTAAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445366.1
CDS-3UTR TCA 90 bp AAGGGTATTTTAAGAGCATTCAGATTCTCCAGCAAATGCTTGCAGTCATCAGTGCCCCTTCCATCACGCTaGGGAGCATCCGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: KGILRAFRFSSKCLQSSVPLPSR*GASAAR
Trigger: CCGAGCTGCGGATGCTCCTCAGCGTGATGGAAGGGG...CACTGATGACTGCAAGCATTTGCTGGAGAATCTGAATGCTCTTAAAATACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp GATTGCACTTGTCTCTCCTTTCTGGCTCAAGCCCTCCGTGCCTACACAAGATTTTCTTGCAGTGGGCCATaGCTGCTTCAAGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: DCTCLSFLAQALRAYTRFSCSGP*LLQGWR
Trigger: TCTCCATCCTTGAAGCAGTCATGGCCCACTGCAAGA...AAATCTTGTGTAGGCACGGAGGGCTTGAGCCAGAAAGGAGAGACAAGTGCAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp CTTTCAGTGCTGCGATTTTCAAGAGGTGCCAAAAAGTCCCTCAATAACTCCGACGTGTCCACAGCTGCGTaGACTGGTGTCCAGCCATCT +
Preference number: 4 (lower is better)
Translates to: LSVLRFSRGAKKSLNNSDVSTAA*TGVQPS
Trigger: AGATGGCTGGACACCAGTTCACGCAGCTGTGGACAC...GTCGGAGTTATTGAGGGACTTTTTGGCACCTCTTGAAAATCGCAGCACTGAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp TTTTTCATACCTTCAGTGCTTAGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGGACTGCGCGAAGCTCTaGCCCACTGACCACGGCACA +
Preference number: 4 (lower is better)
Translates to: FFIPSVLRSGLFQVGKEKDCAKL*PTDHGT
Trigger: TGTGCCGTGGTCAGTGGGTCAGAGCTTCGCGCAGTC...CTTCTCTTTACCCACCTGGAATAAGCCAGACCTAAGCACTGAAGGTATGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp CTTAGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTGCGACATAAGTCACACTACTaGGACAGCCTTCTTGAGGAC +
Preference number: 4 (lower is better)
Translates to: LRSGLFQVGKEKRPDFLRHKSHY*DSLLED
Trigger: GTCCTCAAGAAGGCTGTCTCAGTAGTGTGACTTATG...TCGCAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAATAAGCCAGACCTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp TATTGCAAGTCACGTCTTCCAGACTCCACCATCCATCAGAAGAGATTGCCTGGACAGGGGGAGGGCGCCTaGCCTTTGAACTTATTCACA +
Preference number: 4 (lower is better)
Translates to: YCKSRLPDSTIHQKRLPGQGEGA*PLNLFT
Trigger: TGTGAATAAGTTCAAAGGTCAGGCGCCCTCCCCCTG...TCCAGGCAATCTCTTCTGATGGATGGTGGAGTCTGGAAGACGTGACTTGCAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp CTTAGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTGCGACCCAGAGAGAGTCTCTaGTCCAAATTCAACGTCAGT +
Preference number: 4 (lower is better)
Translates to: LRSGLFQVGKEKRPDFLRPRESL*SKFNVS
Trigger: ACTGACGTTGAATTTGGATCAGAGACTCTCTCTGGG...TCGCAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAATAAGCCAGACCTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
CDS-3UTR TCA 90 bp AGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTGCGAGGAACTGACCTCCTTTTGTaGCACTGGCATTCTCAGATT +
Preference number: 4 (lower is better)
Translates to: RSGLFQVGKEKRPDFLRGTDLLL*HWHSQI
Trigger: AATCTGAGAATGCCAGTGTCACAAAAGGAGGTCAGT...TCCTCGCAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAATAAGCCAGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
CDS-3UTR TCA 90 bp TTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTGCGAGGACTGGTGTTCACCACCCAACTCAGTCTTTaGTTTACTGTTGCTGCATTC +
Preference number: 4 (lower is better)
Translates to: FQVGKEKRPDFLRGLVFTTQLSL*FTVAAF
Trigger: GAATGCAGCAACAGTAAATCAAAGACTGAGTTGGGT...GGTGAACACCAGTCCTCGCAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
CDS-3UTR GCA 90 bp CTTAGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTGCGACTGGTGTTGAGCCAGTaGTTGGTCCATTTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: LRSGLFQVGKEKRPDFLRLVLSQ*LVHFPQ
Trigger: TTGAGGAAAATGGACCAAGCACTGGCTCAACACCAG...TCGCAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAATAAGCCAGACCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp GCCAGACTTCCTGCGAGGACTGGTGTTCACCTTTCTCCAGGCACCACTCTCTCCCACAGTGATGTGCTCTaGCTTATTCTTCCTCATAAA +
Preference number: 4 (lower is better)
Translates to: ARLPARTGVHLSPGTTLSHSDVL*LILPHK
Trigger: TTTATGAGGAAGAATAAGGCAGAGCACATCACTGTG...GGAGAGAGTGGTGCCTGGAGAAAGGTGAACACCAGTCCTCGCAGGAAGTCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp CTGGAGAGGGATCATGGAGGCATAAGTCACACTACTGAGACAGCCTTCTTGAGGACTGTCACTTGGGCATaGCCAGGAACTACAGGACAA +
Preference number: 4 (lower is better)
Translates to: LERDHGGISHTTETAFLRTVTWA*PGTTGQ
Trigger: TTGTCCTGTAGTTCCTGGGCATGCCCAAGTGACAGT...CCTCAAGAAGGCTGTCTCAGTAGTGTGACTTATGCCTCCATGATCCCTCTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp TGGGTAAAGAGAAGCGGCCAGACTTCCTGCGAGGACTGGTGTTCACCTTTCTCCCTTTTAGCAGTTGTCTaGCCAAAGCCAGGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: WVKRSGQTSCEDWCSPFSLLAVV*PKPGCL
Trigger: AAGACAACCTGGCTTTGGGCAGACAACTGCTAAAAG...GGAGAAAGGTGAACACCAGTCCTCGCAGGAAGTCTGGCCGCTTCTCTTTACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp TGGGTAAAGAGAAGCGGCCAGACTTCCTGCGAGGACTGGTGTTCACCTTTCTCCTATCAGACTCAGACTTaGTGGAGCACATGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: WVKRSGQTSCEDWCSPFSYQTQT*WSTCSE
Trigger: TTCAGAGCATGTGCTCCAGCAAGTCTGAGTCTGATA...GGAGAAAGGTGAACACCAGTCCTCGCAGGAAGTCTGGCCGCTTCTCTTTACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
CDS-3UTR CCA 90 bp CTTTCAGTGCTGCGATTTTCAAGAGGTGCCAAAAAGTCCCTCAATAACTCCGACTGGCCATGGTGGCACTaGTGCACACGCTCCCTTTTG +
Preference number: 4 (lower is better)
Translates to: LSVLRFSRGAKKSLNNSDWPWWH*CTRSLL
Trigger: CAAAAGGGAGCGTGTGCACCAGTGCCACCATGGCCA...GTCGGAGTTATTGAGGGACTTTTTGGCACCTCTTGAAAATCGCAGCACTGAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp AGAGCAGCTTTGACCACAGCCTGCTGTCCTTGGCTAGGGTGTCTTTTAGCAGTTTCCGAGCTAGTTGTTTaGCCACTAGGTTGTCACGAC +
Preference number: 4 (lower is better)
Translates to: RAALTTACCPWLGCLLAVSELVV*PLGCHD
Trigger: GTCGTGACAACCTAGTGGCCAAACAACTAGCTCGGA...AACTGCTAAAAGACACCCTAGCCAAGGACAGCAGGCTGTGGTCAAAGCTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp TGGGTAAAGAGAAGCGGCCAGACTTCCTGCGAGGACTGGTGTTCACCTTTCTCCAATCTTGACAGTGCTTaGGTCACAGTATTCCGAGCT +
Preference number: 4 (lower is better)
Translates to: WVKRSGQTSCEDWCSPFSNLDSA*VTVFRA
Trigger: AGCTCGGAATACTGTGACCCAAGCACTGTCAAGATT...GGAGAAAGGTGAACACCAGTCCTCGCAGGAAGTCTGGCCGCTTCTCTTTACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp CTTTCAGTGCTGCGATTTTCAAGAGGTGCCAAAAAGTCCCTCAATAACTCCGACCGACCAACTGGAGGGTaGGTGCCAACATCCCCTGTT +
Preference number: 4 (lower is better)
Translates to: LSVLRFSRGAKKSLNNSDRPTGG*VPTSPV
Trigger: AACAGGGGATGTTGGCACCCACCCTCCAGTTGGTCG...GTCGGAGTTATTGAGGGACTTTTTGGCACCTCTTGAAAATCGCAGCACTGAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp AGAGCAGCTTTGACCACAGCCTGCTGTCCTTGGCTAGGGTGTCTTTTAGCAGTTGCTTGCAGTCATCAGTaGCAACATCATGCACAGTCC +
Preference number: 4 (lower is better)
Translates to: RAALTTACCPWLGCLLAVACSHQ*QHHAQS
Trigger: GGACTGTGCATGATGTTGCCACTGATGACTGCAAGC...AACTGCTAAAAGACACCCTAGCCAAGGACAGCAGGCTGTGGTCAAAGCTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp TTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTGCGAGGACTGGTGTTCACCCGATGTTGGAATCAGTaGTGTTATTGCAAGTCACGT +
Preference number: 4 (lower is better)
Translates to: FQVGKEKRPDFLRGLVFTRCWNQ*CYCKSR
Trigger: ACGTGACTTGCAATAACACCACTGATTCCAACATCG...GGTGAACACCAGTCCTCGCAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp CTTAGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTGCGATCTGGAGAGGGATCATaGAGGCATAAGTCACACTAC +
Preference number: 4 (lower is better)
Translates to: LRSGLFQVGKEKRPDFLRSGEGS*RHKSHY
Trigger: GTAGTGTGACTTATGCCTCCATGATCCCTCTCCAGA...TCGCAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAATAAGCCAGACCTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp AGAAGCGGCCAGACTTCCTGCGAGGACTGGTGTTCACCTTTCTCCAGGCACCACAGACAGGAAATATTTTaGTCCAAGAAGTGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: RSGQTSCEDWCSPFSRHHRQEIF*SKKCFR
Trigger: CCTGAAGCACTTCTTGGACCAAAATATTTCCTGTCT...GTGGTGCCTGGAGAAAGGTGAACACCAGTCCTCGCAGGAAGTCTGGCCGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
CDS-3UTR CCA 90 bp AGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTGCGAGGAGTGTTCTGGGAACACTaGGTGACTTTACTTCTAGGA +
Preference number: 4 (lower is better)
Translates to: RSGLFQVGKEKRPDFLRGVFWEH*VTLLLG
Trigger: TCCTAGAAGTAAAGTCACCCAGTGTTCCCAGAACAC...TCCTCGCAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAATAAGCCAGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
3UTR CAA 72 bp TTGGCGTGGTTAATGAGGTCTGCAGGAACAACAGGCTaGGATATGCCTTCAGGACTCTCTTCTCCTCCATCC +
Preference number: 4 (lower is better)
Translates to: LAWLMRSAGTTG*DMPSGLSSPPS
Trigger: GGATGGAGGAGAAGAGAGTCCTGAAGGCATATCCAAGCCTGTTGTTCCTGCAGACCTCATTAACCACGCCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp GTGCTTAGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTGACTGACCTCCTTTTGTaGCACTGGCATTCTCAGATT +
Preference number: 4 (lower is better)
Translates to: VLRSGLFQVGKEKRPDFLTDLLL*HWHSQI
Trigger: AATCTGAGAATGCCAGTGTCACAAAAGGAGGTCAGT...CAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAATAAGCCAGACCTAAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
CDS-3UTR GCA 90 bp TATTGCAAGTCACGTCTTCCAGACTCCACCATCCATCAGAAGAGATTGCCTGGAGCAGCCAGCTTCTTGTaGTCTTGCTCAAGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: YCKSRLPDSTIHQKRLPGAASFL*SCSRAC
Trigger: ACAAGCCCTTGAGCAAGAGCACAAGAAGCTGGCTGC...TCCAGGCAATCTCTTCTGATGGATGGTGGAGTCTGGAAGACGTGACTTGCAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp TATTGCAAGTCACGTCTTCCAGACTCCACCATCCATCAGAAGAGATTGCCTGGAGGCTCAAGCCCTCCGTaGCTACACAAGATTTCTAGG +
Preference number: 4 (lower is better)
Translates to: YCKSRLPDSTIHQKRLPGGSSPP*LHKISR
Trigger: CCTAGAAATCTTGTGTAGGCACGGAGGGCTTGAGCC...TCCAGGCAATCTCTTCTGATGGATGGTGGAGTCTGGAAGACGTGACTTGCAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp CCAGAGAGAGTCTCTGATCCAAATTCAACGTCAGTGATAGATCATTCTCTAAAGCCATCCCACCGCAGCTaGACCCAGCGGAAATGCTGC +
Preference number: 4 (lower is better)
Translates to: PERVSDPNSTSVIDHSLKPSHRS*TQRKCC
Trigger: GCAGCATTTCCGCTGGGTGCAGCTGCGGTGGGATGG...CTTTAGAGAATGATCTATCACTGACGTTGAATTTGGATCAGAGACTCTCTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp CATGCCCAGGAACTACAGGACAAGACAGGAAATATTTTGGTCCAAGAAGTGCTTCTTCCCGGTTCAGCTTaGCACGAAGCTGTTCCCGCT +
Preference number: 4 (lower is better)
Translates to: HAQELQDKTGNILVQEVLLPGSA*HEAVPA
Trigger: AGCGGGAACAGCTTCGTGCCAAGCTGAACCGGGAAG...AAGCACTTCTTGGACCAAAATATTTCCTGTCTTGTCCTGTAGTTCCTGGGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp TTGGAAAAACCAGCATCTACTTCAGCTCTCACTATTTCACAGGAGAATCCTGCAAGCAAGTCGGAGCCCTaGAGACAGGCCTTGGCGATG +
Preference number: 4 (lower is better)
Translates to: LEKPASTSALTISQENPASKSEP*RQALAM
Trigger: CATCGCCAAGGCCTGTCTCCAGGGCTCCGACTTGCT...TGCAGGATTCTCCTGTGAAATAGTGAGAGCTGAAGTAGATGCTGGTTTTTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp AGGCAGTTCTTAAAACCTTTGGAAGCAGCAATGTGGGCAGCAGTCCAGCCTTCTCACTTCACTGTCACTTaGGCATGCCCAGGAACTACA +
Preference number: 4 (lower is better)
Translates to: RQFLKPLEAAMWAAVQPSHFTVT*ACPGTT
Trigger: TGTAGTTCCTGGGCATGCCCAAGTGACAGTGAAGTG...AGAAGGCTGGACTGCTGCCCACATTGCTGCTTCCAAAGGTTTTAAGAACTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp CTAATGAACAGGTCTAGTAGCTGTTCCTTGGAAAAACCAGCATCTACTTCAGCTGGTCTAGCTCTGCTCTaGGGAGGGGACAGCCATGCA +
Preference number: 4 (lower is better)
Translates to: LMNRSSSCSLEKPASTSAGLALL*GGDSHA
Trigger: TGCATGGCTGTCCCCTCCCCAGAGCAGAGCTAGACC...AGCTGAAGTAGATGCTGGTTTTTCCAAGGAACAGCTACTAGACCTGTTCATTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR CAA 72 bp CTTGCACTGAGGCCGATGTTGGAATCAGTGGTGTTATaGCAAGTCACGTCTTCCAGACTCCACCATCCATCA +
Preference number: 4 (lower is better)
Translates to: LALRPMLESVVL*QVTSSRLHHPS
Trigger: TGATGGATGGTGGAGTCTGGAAGACGTGACTTGCAATAACACCACTGATTCCAACATCGGCCTCAGTGCAAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp CCAGCAAATGCTTGCAGTCATCAGTGGCAACATCATGCACAGTCCGATTGCACTTGTCTATCTCCTCTTTaGGGTCAGTGGTGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: PANACSHQWQHHAQSDCTCLSPL*GQWCVL
Trigger: AAGCACACACCACTGACCTCAAAGAGGAGATAGACA...AGTGCAATCGGACTGTGCATGATGTTGCCACTGATGACTGCAAGCATTTGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp CATGCCCAGGAACTACAGGACAAGACAGGAAATATTTTGGTCCAAGAAGTGCTTCAGCTGAGGGGAGGATaGCTTAGGAAGGTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: HAQELQDKTGNILVQEVLQLRGG*LRKVLL
Trigger: GAGGAGAACCTTCCTAAGTCATCCTCCCCTCAGCTG...AAGCACTTCTTGGACCAAAATATTTCCTGTCTTGTCCTGTAGTTCCTGGGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGGCCAGGCACCCACCTaGGACGTGGCCAGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEGQAPT*DVARAE
Trigger: TTCAGCCCTGGCCACGTCTCAGGTGGGTGCCTGGCC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000160373.8
CDS-3UTR TCA 90 bp AGGCAGTTCTTAAAACCTTTGGAAGCAGCAATGTGGGCAGCAGTCCAGCCTTCTCGGACTCCTCCTCATTaGAAGAATTTCCATGAGCTG +
Preference number: 4 (lower is better)
Translates to: RQFLKPLEAAMWAAVQPSRTPPH*KNFHEL
Trigger: CAGCTCATGGAAATTCTTTCAATGAGGAGGAGTCCG...AGAAGGCTGGACTGCTGCCCACATTGCTGCTTCCAAAGGTTTTAAGAACTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp CTTAGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTGCGACTGGGCCGTGGAAAATaGCATTATGATATTGCTCAA +
Preference number: 4 (lower is better)
Translates to: LRSGLFQVGKEKRPDFLRLGRGK*HYDIAQ
Trigger: TTGAGCAATATCATAATGTCATTTTCCACGGCCCAG...TCGCAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAATAAGCCAGACCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp CCAGCAAATGCTTGCAGTCATCAGTGGCAACATCATGCACAGTCCGATTGCACTTTTGTCACCAGCACCTaGTTCATAGTCTCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: PANACSHQWQHHAQSDCTFVTST*FIVSLE
Trigger: CTCCAGAGAGACTATGAAGCAGGTGCTGGTGACAAA...AGTGCAATCGGACTGTGCATGATGTTGCCACTGATGACTGCAAGCATTTGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp TATTGCAAGTCACGTCTTCCAGACTCCACCATCCATCAGAAGAGATTGCCTGGAGCGGACATCCTTTCTTaGATTTTCTTGCAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: YCKSRLPDSTIHQKRLPGADILS*IFLQWA
Trigger: GGCCCACTGCAAGAAAATGCAAGAAAGGATGTCCGC...TCCAGGCAATCTCTTCTGATGGATGGTGGAGTCTGGAAGACGTGACTTGCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp GATTGCACTTGTCTCTCCTTTCTGGCTCAAGCCCTCCGTGCCTACACAAGATTTGAGAGAGGCTTGGTTTaGTGTCACTTCCCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: DCTCLSFLAQALRAYTRFERGLV*CHFPFS
Trigger: TGAAAAGGGGAAGTGACAGCAAACCAAGCCTCTCTC...AAATCTTGTGTAGGCACGGAGGGCTTGAGCCAGAAAGGAGAGACAAGTGCAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp CTTTATTTCCATTTTTACAGGCCAGGTATAGAGGTGTCTGTCCTCCATCAGCAGCCATGGTGGCACTGGTaGACACGCTCCCTTTTGCAT +
Preference number: 4 (lower is better)
Translates to: LYFHFYRPGIEVSVLHQQPWWHW*TRSLLH
Trigger: ATGCAAAAGGGAGCGTGTGCACCAGTGCCACCATGG...CTGCTGATGGAGGACAGACACCTCTATACCTGGCCTGTAAAAATGGAAATAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp CTTAGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTGCGATTCCTCAATTTTGTTTaGACTTGGAGGTGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: LRSGLFQVGKEKRPDFLRFLNFV*TWRWES
Trigger: GCTTTCCCACCTCCAAGTGCAAACAAAATTGAGGAA...TCGCAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAATAAGCCAGACCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp CTTTCAGTGCTGCGATTTTCAAGAGGTGCCAAAAAGTCCCTCAATAACTCCGACCTTCGTAAGAACCTCTaGAGCAGTCCTTGCATGGGC +
Preference number: 4 (lower is better)
Translates to: LSVLRFSRGAKKSLNNSDLRKNL*SSPCMG
Trigger: GCCCATGCAAGGACTGCTGCAGAGGTTCTTACGAAG...GTCGGAGTTATTGAGGGACTTTTTGGCACCTCTTGAAAATCGCAGCACTGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp TTGGAAAAACCAGCATCTACTTCAGCTCTCACTATTTCACAGGAGAATCCTGCACCCAGTCGACAATCTTaGACACAGGATCGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: LEKPASTSALTISQENPAPSRQS*TQDRRG
Trigger: CCCCCTGCGATCCTGTGTGCAAGATTGTCGACTGGG...TGCAGGATTCTCCTGTGAAATAGTGAGAGCTGAAGTAGATGCTGGTTTTTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp CTTTATTTCCATTTTTACAGGCCAGGTATAGAGGTGTCTGTCCTCCATCAGCAGGCTTTGACCACAGCCTaGTGTCCTTGGCTAGGGTGT +
Preference number: 4 (lower is better)
Translates to: LYFHFYRPGIEVSVLHQQALTTA*CPWLGC
Trigger: ACACCCTAGCCAAGGACAGCAGGCTGTGGTCAAAGC...CTGCTGATGGAGGACAGACACCTCTATACCTGGCCTGTAAAAATGGAAATAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp CTTAGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTGCGACTGTTCCCACAGATATaGAAACCAAACGCCTATCTT +
Preference number: 4 (lower is better)
Translates to: LRSGLFQVGKEKRPDFLRLFPQI*KPNAYL
Trigger: AAGATAGGCGTTTGGTTTCCATATCTGTGGGAACAG...TCGCAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAATAAGCCAGACCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp AAGGGTATTTTAAGAGCATTCAGATTCTCCAGCAAATGCTTGCAGTCATCAGTGCTGGTGTTTGAGCGGTaGGAGGGGCAGCGTTACTGG +
Preference number: 4 (lower is better)
Translates to: KGILRAFRFSSKCLQSSVLVFER*EGQRYW
Trigger: CCAGTAACGCTGCCCCTCCCACCGCTCAAACACCAG...CACTGATGACTGCAAGCATTTGCTGGAGAATCTGAATGCTCTTAAAATACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp CTAATGAACAGGTCTAGTAGCTGTTCCTTGGAAAAACCAGCATCTACTTCAGCTCTGAGGAGCTATGCCTaGTGTTTGAGCGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LMNRSSSCSLEKPASTSALRSYA*CLSGGR
Trigger: CCTCCCACCGCTCAAACACCAGGCATAGCTCCTCAG...AGCTGAAGTAGATGCTGGTTTTTCCAAGGAACAGCTACTAGACCTGTTCATTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp GTGCTTAGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTGGATGCAAAGAGGTGTTaGCACATGGTGAATGTAAAC +
Preference number: 4 (lower is better)
Translates to: VLRSGLFQVGKEKRPDFLDAKRC*HMVNVN
Trigger: GTTTACATTCACCATGTGCCAACACCTCTTTGCATC...CAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAATAAGCCAGACCTAAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp GCCAGACTTCCTGCGAGGACTGGTGTTCACCTTTCTCCAGGCACCACTCTCTCCAACTACTTGAAAAGTTaGCATAACTTCCTGGTATTG +
Preference number: 4 (lower is better)
Translates to: ARLPARTGVHLSPGTTLSNYLKS*HNFLVL
Trigger: CAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT...GGAGAGAGTGGTGCCTGGAGAAAGGTGAACACCAGTCCTCGCAGGAAGTCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR CAA 72 bp CAAGGGTGTGAAGCCATTTTTATCAGCAGCATTGACTaGGGCTTCTGCACTCAGCAGCAATCTCACACAGTC +
Preference number: 4 (lower is better)
Translates to: QGCEAIFISSID*GFCTQQQSHTV
Trigger: GACTGTGTGAGATTGCTGCTGAGTGCAGAAGCCCAAGTCAATGCTGCTGATAAAAATGGCTTCACACCCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR CAA 72 bp GCACACAAGGGTGTGAAGCCATTTTTATCAGCAGCATaGACTTGGGCTTCTGCACTCAGCAGCAATCTCACA +
Preference number: 4 (lower is better)
Translates to: AHKGVKPFLSAA*TWASALSSNLT
Trigger: TGTGAGATTGCTGCTGAGTGCAGAAGCCCAAGTCAATGCTGCTGATAAAAATGGCTTCACACCCTTGTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACCCCTTCCATCACGCTaGGGAGCATCCGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEPLPSR*GASAAR
Trigger: CCGAGCTGCGGATGCTCCTCAGCGTGATGGAAGGGG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACCCGCAGGGCCTCGATaGCAAGGTCTCTGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEPAGPR*QGLWPP
Trigger: TGGAGGCCAGAGACCTTGTCATCGAGGCCCTGCGGG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR TCA 90 bp CATGCCCAGGAACTACAGGACAAGACAGGAAATATTTTGGTCCAAGAAGTGCTTAGGCGAGACATCTCTTaGCGGAGGACTTTGGGTAGT +
Preference number: 4 (lower is better)
Translates to: HAQELQDKTGNILVQEVLRRDIS*RRTLGS
Trigger: ACTACCCAAAGTCCTCCGTCAAGAGATGTCTCGCCT...AAGCACTTCTTGGACCAAAATATTTCCTGTCTTGTCCTGTAGTTCCTGGGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGGGCACTCCAGGCCTTaGGGGAGCACCTGCTTGAGG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEGHSRP*GSTCLR
Trigger: CCTCAAGCAGGTGCTCCCTCAAGGCCTGGAGTGCCC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAAGACGTGGCCAGGGCTaGAACGGCACAGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTERRGQG*NGTACR
Trigger: CCTGCAGGCTGTGCCGTTTCAGCCCTGGCCACGTCT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR TCA 90 bp ACAACAGGCTTGGATATGCCTTCAGGACTCTCTTCTCCTCCATCCAAGTCAAAGCAAGTCAAAGACACTTaGCTCGGACTCCTCCTCATT +
Preference number: 4 (lower is better)
Translates to: TTGLDMPSGLSSPPSKSKQVKDT*LGLLLI
Trigger: AATGAGGAGGAGTCCGAGTCAAGTGTCTTTGACTTG...CTTTGACTTGGATGGAGGAGAAGAGAGTCCTGAAGGCATATCCAAGCCTGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp TCAGAGACTTGCACAATCCTGGCTTCATCACTTGCTAGATGCATGACTTTGAGCGTATGCTTCTTGCACTaGGGCCGATGTTGGAATCAG +
Preference number: 4 (lower is better)
Translates to: SETCTILASSLARCMTLSVCFLH*GRCWNQ
Trigger: CTGATTCCAACATCGGCCTCAGTGCAAGAAGCATAC...GCTCAAAGTCATGCATCTAGCAAGTGATGAAGCCAGGATTGTGCAAGTCTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416239.1
CDS-3UTR TCA 90 bp TCAGAGACTTGCACAATCCTGGCTTCATCACTTGCTAGATGCATGACTTTGAGCCTGAGACAGCCTTCTTaGGGACCTGACAAAAGCACA +
Preference number: 4 (lower is better)
Translates to: SETCTILASSLARCMTLSLRQPS*GPDKST
Trigger: TGTGCTTTTGTCAGGTCCTCAAGAAGGCTGTCTCAG...GCTCAAAGTCATGCATCTAGCAAGTGATGAAGCCAGGATTGTGCAAGTCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416239.1
CDS-3UTR TCA 90 bp TATTGCAAGTCACGTCTTCCAGACTCCACCATCCATCAGAAGAGATTGCCTGGAGACAATATTGCTTCTTaGACTCTGGGTGCGATGACG +
Preference number: 4 (lower is better)
Translates to: YCKSRLPDSTIHQKRLPGDNIAS*TLGAMT
Trigger: CGTCATCGCACCCAGAGTTCAAGAAGCAATATTGTC...TCCAGGCAATCTCTTCTGATGGATGGTGGAGTCTGGAAGACGTGACTTGCAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp TCAGAGACTTGCACAATCCTGGCTTCATCACTTGCTAGATGCATGACTTTGAGCGTTTCCCCATCAGCCTaGGGTAGTTCTGCATCATCT +
Preference number: 4 (lower is better)
Translates to: SETCTILASSLARCMTLSVSPSA*GSSASS
Trigger: AGATGATGCAGAACTACCTCAGGCTGATGGGGAAAC...GCTCAAAGTCATGCATCTAGCAAGTGATGAAGCCAGGATTGTGCAAGTCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416239.1
CDS-3UTR GCA 90 bp TCTGGGTGCGATGACGCCATTCCACAGCTTAGACATCCACTTCACTGTCACTTGCATCAGAACCATAGTTaGTTGGTTCAATCTCACCCA +
Preference number: 4 (lower is better)
Translates to: SGCDDAIPQLRHPLHCHLHQNHS*LVQSHP
Trigger: TGGGTGAGATTGAACCAAGCAACTATGGTTCTGATG...CAAGTGACAGTGAAGTGGATGTCTAAGCTGTGGAATGGCGTCATCGCACCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp GTGCTTAGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTGTTGAAATCAGCTGTATaGTGGTCTAGCTTTCACTGT +
Preference number: 4 (lower is better)
Translates to: VLRSGLFQVGKEKRPDFLLKSAV*WSSFHC
Trigger: ACAGTGAAAGCTAGACCAGCATACAGCTGATTTCAA...CAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAATAAGCCAGACCTAAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445366.1
CDS-3UTR CCA 90 bp CTTTCAGTGCTGCGATTTTCAAGAGGTGCCAAAAAGTCCCTCAATAACTCCGACACGTCTTCGAGCTTCTaGGCCTCCTCTATGACTTTG +
Preference number: 4 (lower is better)
Translates to: LSVLRFSRGAKKSLNNSDTSSSF*ASSMTL
Trigger: CAAAGTCATAGAGGAGGCCCAGAAGCTCGAAGACGT...GTCGGAGTTATTGAGGGACTTTTTGGCACCTCTTGAAAATCGCAGCACTGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp CCTGACAAAAGCACAGTGATGTGCTCTGCCTTATTCTTCCTCATAAAGTCCCACTGGAAGAGAGAGGCTTaGTTTGCTGTCACTTCCCCT +
Preference number: 4 (lower is better)
Translates to: PDKSTVMCSALFFLIKSHWKREA*FAVTSP
Trigger: AGGGGAAGTGACAGCAAACCAAGCCTCTCTCTTCCA...GTGGGACTTTATGAGGAAGAATAAGGCAGAGCACATCACTGTGCTTTTGTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp TTGGAAAAACCAGCATCTACTTCAGCTCTCACTATTTCACAGGAGAATCCTGCAGTGGGGGTGTGCTACTaGTTGGATCTGGTGTTGAGC +
Preference number: 4 (lower is better)
Translates to: LEKPASTSALTISQENPAVGVCY*LDLVLS
Trigger: GCTCAACACCAGATCCAACCAGTAGCACACCCCCAC...TGCAGGATTCTCCTGTGAAATAGTGAGAGCTGAAGTAGATGCTGGTTTTTCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp GCTGGTATTCTATGGTACATAAGAAGCTTGAGGCTGTCCACATTACCAGTGTCCATCTATGGATGGTTTTaGTGGCAGCTGAGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: AGILWYIRSLRLSTLPVSIYGWF*WQLRGG
Trigger: TCCTCCCCTCAGCTGCCACCAAAACCATCCATAGAT...GGACACTGGTAATGTGGACAGCCTCAAGCTTCTTATGTACCATAGAATACCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp TCAGAGACTTGCACAATCCTGGCTTCATCACTTGCTAGATGCATGACTTTGAGCGCACATTTCCTAGCGTaGTGGATCGTATGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: SETCTILASSLARCMTLSAHFLA*WIVCFL
Trigger: CAAGAAGCATACGATCCATCACGCTAGGAAATGTGC...GCTCAAAGTCATGCATCTAGCAAGTGATGAAGCCAGGATTGTGCAAGTCTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416239.1
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGACTGCGCGAAGCTCTaGCCCACTGACCACGGCACA +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEDCAKL*PTDHGT
Trigger: TGTGCCGTGGTCAGTGGGTCAGAGCTTCGCGCAGTC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR TCA 90 bp GCTGGTATTCTATGGTACATAAGAAGCTTGAGGCTGTCCACATTACCAGTGTCCCTGGAGCACATGCTCTaGAGTTCCTTGACAAGATCT +
Preference number: 4 (lower is better)
Translates to: AGILWYIRSLRLSTLPVSLEHML*SSLTRS
Trigger: AGATCTTGTCAAGGAACTTCAGAGCATGTGCTCCAG...GGACACTGGTAATGTGGACAGCCTCAAGCTTCTTATGTACCATAGAATACCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp AGGCAGTTCTTAAAACCTTTGGAAGCAGCAATGTGGGCAGCAGTCCAGCCTTCTAATCAGCAATCTTGCTaGTATCAGACTCAGACTTGC +
Preference number: 4 (lower is better)
Translates to: RQFLKPLEAAMWAAVQPSNQQSC*YQTQTC
Trigger: GCAAGTCTGAGTCTGATATCAGCAAGATTGCTGATT...AGAAGGCTGGACTGCTGCCCACATTGCTGCTTCCAAAGGTTTTAAGAACTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp TTGGAAAAACCAGCATCTACTTCAGCTCTCACTATTTCACAGGAGAATCCTGCAAGCAGCAGCCAGCTGTaGGGACATCCTTTCTTGCAT +
Preference number: 4 (lower is better)
Translates to: LEKPASTSALTISQENPASSSQL*GHPFLH
Trigger: ATGCAAGAAAGGATGTCCGCACAGCTGGCTGCTGCT...TGCAGGATTCTCCTGTGAAATAGTGAGAGCTGAAGTAGATGCTGGTTTTTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp AAGGGTATTTTAAGAGCATTCAGATTCTCCAGCAAATGCTTGCAGTCATCAGTGCCACCTGCTTGTTCTTaGCACGCTCTTCCTCAAGGC +
Preference number: 4 (lower is better)
Translates to: KGILRAFRFSSKCLQSSVPPACS*HALPQG
Trigger: GCCTTGAGGAAGAGCGTGGCAAGAACAAGCAGGTGG...CACTGATGACTGCAAGCATTTGCTGGAGAATCTGAATGCTCTTAAAATACCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp TGGGAACACTGGGTGACTTTACTTCTAGGAACAGGAAGAAAAGATTTAACTCTTACCAGTGTCCACAGCTaGGTGAACTGGTGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: WEHWVTLLLGTGRKDLTLTSVHS*VNWCPA
Trigger: GGCTGGACACCAGTTCACGCAGCTGTGGACACTGGT...AAGAGTTAAATCTTTTCTTCCTGTTCCTAGAAGTAAAGTCACCCAGTGTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp TGGGAACACTGGGTGACTTTACTTCTAGGAACAGGAAGAAAAGATTTAACTCTTACCCAGCGGAAATGCTaGTGCACCAGCAAGTCGGAG +
Preference number: 4 (lower is better)
Translates to: WEHWVTLLLGTGRKDLTLTQRKC*CTSKSE
Trigger: CTCCGACTTGCTGGTGCAGCAGCATTTCCGCTGGGT...AAGAGTTAAATCTTTTCTTCCTGTTCCTAGAAGTAAAGTCACCCAGTGTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACCATCCCACCGCAGCTaGACCCAGCGGAAATGCTGC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEPSHRS*TQRKCC
Trigger: GCAGCATTTCCGCTGGGTGCAGCTGCGGTGGGATGG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGAAGTGCTTCAGGTGTaGCCAAGCGGGCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEEVLQV*PSGPGR
Trigger: CCTGCCTGGCCCGCTTGGGCACACCTGAAGCACTTC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR GCA 90 bp CTTTATTTCCATTTTTACAGGCCAGGTATAGAGGTGTCTGTCCTCCATCAGCAGGGGAGGGGACAGCCATaGAGTACAGCTTTATTTAGC +
Preference number: 4 (lower is better)
Translates to: LYFHFYRPGIEVSVLHQQGRGQP*STALFS
Trigger: GCTAAATAAAGCTGTACTGCATGGCTGTCCCCTCCC...CTGCTGATGGAGGACAGACACCTCTATACCTGGCCTGTAAAAATGGAAATAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp TGGGAACACTGGGTGACTTTACTTCTAGGAACAGGAAGAAAAGATTTAACTCTTAGCGGCCAGACTTCCTaGGAGGACTGGTGTTCACCT +
Preference number: 4 (lower is better)
Translates to: WEHWVTLLLGTGRKDLTLSGQTS*EDWCSP
Trigger: AGGTGAACACCAGTCCTCGCAGGAAGTCTGGCCGCT...AAGAGTTAAATCTTTTCTTCCTGTTCCTAGAAGTAAAGTCACCCAGTGTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACTGGTCTGGCCATGGTaGCACTGGTGCACACGCTCC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTELVWPW*HWCTRS
Trigger: GGAGCGTGTGCACCAGTGCCACCATGGCCAGACCAG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CCA 90 bp TATTGCAAGTCACGTCTTCCAGACTCCACCATCCATCAGAAGAGATTGCCTGGAAATTTTGTTTGCACTTaGAGGTGGGAAAGCGGGTAC +
Preference number: 4 (lower is better)
Translates to: YCKSRLPDSTIHQKRLPGNFVCT*RWESGY
Trigger: GTACCCGCTTTCCCACCTCCAAGTGCAAACAAAATT...TCCAGGCAATCTCTTCTGATGGATGGTGGAGTCTGGAAGACGTGACTTGCAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp CCAGCAAATGCTTGCAGTCATCAGTGGCAACATCATGCACAGTCCGATTGCACTCTTGACGGAGGACTTTaGGTAGTATTTCCATTTTGG +
Preference number: 4 (lower is better)
Translates to: PANACSHQWQHHAQSDCTLDGGL*VVFPFW
Trigger: CCAAAATGGAAATACTACCCAAAGTCCTCCGTCAAG...AGTGCAATCGGACTGTGCATGATGTTGCCACTGATGACTGCAAGCATTTGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp GATTTTCAAGAGGTGCCAAAAAGTCCCTCAATAACTCCGACAGTGAAGATTTTTACTGGTCCGACCAACTaGAGGGTGGGTGCCAACATC +
Preference number: 4 (lower is better)
Translates to: DFQEVPKSPSITPTVKIFTGPTN*RVGANI
Trigger: GATGTTGGCACCCACCCTCCAGTTGGTCGGACCAGT...AAAAATCTTCACTGTCGGAGTTATTGAGGGACTTTTTGGCACCTCTTGAAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp TTGGAAAAACCAGCATCTACTTCAGCTCTCACTATTTCACAGGAGAATCCTGCATCCCTTGTGGCAAACTaGAAGGAGTCGAAGCCACAG +
Preference number: 4 (lower is better)
Translates to: LEKPASTSALTISQENPASLVAN*KESKPQ
Trigger: CTGTGGCTTCGACTCCTTCCAGTTTGCCACAAGGGA...TGCAGGATTCTCCTGTGAAATAGTGAGAGCTGAAGTAGATGCTGGTTTTTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp CCAGCAAATGCTTGCAGTCATCAGTGGCAACATCATGCACAGTCCGATTGCACTCCACAGTTAAATCTATaGATGGTTTTGGTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: PANACSHQWQHHAQSDCTPQLNL*MVLVAA
Trigger: AGCTGCCACCAAAACCATCCATAGATTTAACTGTGG...AGTGCAATCGGACTGTGCATGATGTTGCCACTGATGACTGCAAGCATTTGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACACCCACCTGAGACGTaGCCAGGGCTGAAACGGCAC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEHPPET*PGLKRH
Trigger: GTGCCGTTTCAGCCCTGGCCACGTCTCAGGTGGGTG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000160373.8
CDS-3UTR CCA 90 bp ACAACAGGCTTGGATATGCCTTCAGGACTCTCTTCTCCTCCATCCAAGTCAAAGTTGCAAGCTTCCTTCTaGGCCGTGGAAAATGACATT +
Preference number: 4 (lower is better)
Translates to: TTGLDMPSGLSSPPSKSKLQASF*AVENDI
Trigger: AATGTCATTTTCCACGGCCCAGAAGGAAGCTTGCAA...CTTTGACTTGGATGGAGGAGAAGAGAGTCCTGAAGGCATATCCAAGCCTGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp CCAGCAAATGCTTGCAGTCATCAGTGGCAACATCATGCACAGTCCGATTGCACTAGTCCATTTCCTTTTTaGAAAGTGCAGGGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: PANACSHQWQHHAQSDCTSPFPF*KVQGLS
Trigger: TGAAAGCCCCTGCACTTTCCAAAAAGGAAATGGACT...AGTGCAATCGGACTGTGCATGATGTTGCCACTGATGACTGCAAGCATTTGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGCAGCAGTCCTTGCATaGGCTCGCCATCCCACCGCA +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEAAVLA*ARHPTA
Trigger: TGCGGTGGGATGGCGAGCCCATGCAAGGACTGCTGC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp GGAAGAAAAGATTTAACTCTTGAAACACCCAACTCAGTCTTTGATTTACTGTTGGACCAGCCTGAGACGTaGCCAGGGCTGAAACGGCAC +
Preference number: 4 (lower is better)
Translates to: GRKDLTLETPNSVFDLLLDQPET*PGLKRH
Trigger: GTGCCGTTTCAGCCCTGGCCACGTCTCAGGCTGGTC...CAACAGTAAATCAAAGACTGAGTTGGGTGTTTCAAGAGTTAAATCTTTTCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR CAA 72 bp TCACGTCTTCCAGACTCCACCATCCATCAGAAGAGATaGCCTGGAAATGATTTGTCAGAGCTTGACTCACTG +
Preference number: 4 (lower is better)
Translates to: SRLPDSTIHQKR*PGNDLSELDSL
Trigger: CAGTGAGTCAAGCTCTGACAAATCATTTCCAGGCAATCTCTTCTGATGGATGGTGGAGTCTGGAAGACGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR CAA 72 bp CTTCAGGCAGAGTGCAAGCTGATGTACTATGTAGTCTaGCAAGCTTCCTTCTGGGCCGTGGAAAATGACATT +
Preference number: 4 (lower is better)
Translates to: LQAECKLMYYVV*QASFWAVENDI
Trigger: AATGTCATTTTCCACGGCCCAGAAGGAAGCTTGCAAGACTACATAGTACATCAGCTTGCACTCTGCCTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp CATGCCCAGGAACTACAGGACAAGACAGGAAATATTTTGGTCCAAGAAGTGCTTAGGGCTTGTAAATCTTaGCAGTGCTTGGGTCACAGT +
Preference number: 4 (lower is better)
Translates to: HAQELQDKTGNILVQEVLRACKS*QCLGHS
Trigger: ACTGTGACCCAAGCACTGTCAAGATTTACAAGCCCT...AAGCACTTCTTGGACCAAAATATTTCCTGTCTTGTCCTGTAGTTCCTGGGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAAGGCAGGAGTTAAGCTaGCGCCAGACGGACAGAGCC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTERQELS*RQTDRA
Trigger: GGCTCTGTCCGTCTGGCGTCAGCTTAACTCCTGCCT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR TCA 90 bp CTTTCAGTGCTGCGATTTTCAAGAGGTGCCAAAAAGTCCCTCAATAACTCCGACTGCTCTGAAGTTCCTTaGCAAGATCTGCTTCGTCAT +
Preference number: 4 (lower is better)
Translates to: LSVLRFSRGAKKSLNNSDCSEVP*QDLLRH
Trigger: ATGACGAAGCAGATCTTGTCAAGGAACTTCAGAGCA...GTCGGAGTTATTGAGGGACTTTTTGGCACCTCTTGAAAATCGCAGCACTGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACAACTGGAGGGTGGGTaGCAACATCCCCTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEQLEGG*QHPLLG
Trigger: CCCCAACAGGGGATGTTGGCACCCACCCTCCAGTTG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR GCA 90 bp GCTGGTATTCTATGGTACATAAGAAGCTTGAGGCTGTCCACATTACCAGTGTCCAGATTCTCCAGCAAATaGTTGCAGTCATCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: AGILWYIRSLRLSTLPVSRFSSK*LQSSVA
Trigger: TGCCACTGATGACTGCAAGCATTTGCTGGAGAATCT...GGACACTGGTAATGTGGACAGCCTCAAGCTTCTTATGTACCATAGAATACCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp TTTTTCATACCTTCAGTGCTTAGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGAGGGGCTTTCAGTGCTaGGATTTTCAAGAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: FFIPSVLRSGLFQVGKEKRGFQC*DFQEVP
Trigger: TGGCACCTCTTGAAAATCGCAGCACTGAAAGCCCCT...CTTCTCTTTACCCACCTGGAATAAGCCAGACCTAAGCACTGAAGGTATGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACAGCGGAAATGCTGCTaGACCAGCAAGTCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEQRKCC*TSKSEP
Trigger: GGGCTCCGACTTGCTGGTGCAGCAGCATTTCCGCTG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR GCA 90 bp GGAAGAAAAGATTTAACTCTTGAAACACCCAACTCAGTCTTTGATTTACTGTTGCAGCGGAAATGCTGCTaGACCAGCAAGTCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: GRKDLTLETPNSVFDLLLQRKCC*TSKSEP
Trigger: GGGCTCCGACTTGCTGGTGCAGCAGCATTTCCGCTG...CAACAGTAAATCAAAGACTGAGTTGGGTGTTTCAAGAGTTAAATCTTTTCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACTCTGCAGCAGTCCTTaGATGGGCTCGCCATCCCAC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTELCSSP*MGSPSH
Trigger: GTGGGATGGCGAGCCCATGCAAGGACTGCTGCAGAG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR GCA 90 bp CCTGACAAAAGCACAGTGATGTGCTCTGCCTTATTCTTCCTCATAAAGTCCCACTTGAAATCAGCTGTATaGTGGTCTAGCTCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: PDKSTVMCSALFFLIKSHLKSAV*WSSSAL
Trigger: CAGAGCAGAGCTAGACCAGCATACAGCTGATTTCAA...GTGGGACTTTATGAGGAAGAATAAGGCAGAGCACATCACTGTGCTTTTGTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp CTTTCAGTGCTGCGATTTTCAAGAGGTGCCAAAAAGTCCCTCAATAACTCCGACGCCTTGTATTACTGCTaGTGCTGCTTCTTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: LSVLRFSRGAKKSLNNSDALYYC*CCFFWC
Trigger: ACACCAAAAGAAGCAGCAGCAGCAGTAATACAAGGC...GTCGGAGTTATTGAGGGACTTTTTGGCACCTCTTGAAAATCGCAGCACTGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATACCTGGTCTGGCCATaGTGGCACTGGTGCACACGC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEYLVWP*WHWCTR
Trigger: GCGTGTGCACCAGTGCCACCATGGCCAGACCAGGTA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CCA 90 bp GATTTTCAAGAGGTGCCAAAAAGTCCCTCAATAACTCCGACAGTGAAGATTTTTCTGCCTGTCAATACCTaGTCTGGCCATGGTGGCACT +
Preference number: 4 (lower is better)
Translates to: DFQEVPKSPSITPTVKIFLPVNT*SGHGGT
Trigger: AGTGCCACCATGGCCAGACCAGGTATTGACAGGCAG...AAAAATCTTCACTGTCGGAGTTATTGAGGGACTTTTTGGCACCTCTTGAAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGAGGGGCAGCGTTACTaGGAAGTGGGGGTGTGCTAC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEEGQRY*EVGVCY
Trigger: GTAGCACACCCCCACTTCCCAGTAACGCTGCCCCTC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACTGGTGTTTGAGCGGTaGGAGGGGCAGCGTTACTGG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTELVFER*EGQRYW
Trigger: CCAGTAACGCTGCCCCTCCCACCGCTCAAACACCAG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CCA 90 bp GATTTTCAAGAGGTGCCAAAAAGTCCCTCAATAACTCCGACAGTGAAGATTTTTCTTGTCTCTCCTTTCTaGCTCAAGCCCTCCGTGCCT +
Preference number: 4 (lower is better)
Translates to: DFQEVPKSPSITPTVKIFLVSPF*LKPSVP
Trigger: AGGCACGGAGGGCTTGAGCCAGAAAGGAGAGACAAG...AAAAATCTTCACTGTCGGAGTTATTGAGGGACTTTTTGGCACCTCTTGAAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAAGCAAGTCGGAGCCCTaGAGACAGGCCTTGGCGATG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTESKSEP*RQALAM
Trigger: CATCGCCAAGGCCTGTCTCCAGGGCTCCGACTTGCT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGGTCTAGCTCTGCTCTaGGGAGGGGACAGCCATGCA +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEGLALL*GGDSHA
Trigger: TGCATGGCTGTCCCCTCCCCAGAGCAGAGCTAGACC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp AAGGGTATTTTAAGAGCATTCAGATTCTCCAGCAAATGCTTGCAGTCATCAGTGCTGGCTTATTCCAGGTaGGTAAAGAGAAGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: KGILRAFRFSSKCLQSSVLAYSR*VKRSGQ
Trigger: CTGGCCGCTTCTCTTTACCCACCTGGAATAAGCCAG...CACTGATGACTGCAAGCATTTGCTGGAGAATCTGAATGCTCTTAAAATACCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp CATGCCCAGGAACTACAGGACAAGACAGGAAATATTTTGGTCCAAGAAGTGCTTCAGACTCAGACTTGCTaGAGCACATGCTCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: HAQELQDKTGNILVQEVLQTQTC*STCSEV
Trigger: AACTTCAGAGCATGTGCTCCAGCAAGTCTGAGTCTG...AAGCACTTCTTGGACCAAAATATTTCCTGTCTTGTCCTGTAGTTCCTGGGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp ATTTTAAGAGCATTCAGATTCTCCAGCAAATGCTTGCAGTCATCAGTGGCAACATCAAGGGCTTGTAGCTaGAGCTTCTCCATTTCCAGC +
Preference number: 4 (lower is better)
Translates to: ILRAFRFSSKCLQSSVATSRACS*SFSISS
Trigger: GCTGGAAATGGAGAAGCTTCAGCTACAAGCCCTTGA...TGTTGCCACTGATGACTGCAAGCATTTGCTGGAGAATCTGAATGCTCTTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp CTAATGAACAGGTCTAGTAGCTGTTCCTTGGAAAAACCAGCATCTACTTCAGCTACTCGTGCTACACCATaGGTCTTTAAACTGGTCCGA +
Preference number: 4 (lower is better)
Translates to: LMNRSSSCSLEKPASTSATRATP*VFKLVR
Trigger: TCGGACCAGTTTAAAGACTCATGGTGTAGCACGAGT...AGCTGAAGTAGATGCTGGTTTTTCCAAGGAACAGCTACTAGACCTGTTCATTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATACCAGGAGGCTGTCTaGGGCACCTGGTCTACAGGA +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEYQEAV*GTWSTG
Trigger: TCCTGTAGACCAGGTGCCTCAGACAGCCTCCTGGTA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000160373.8
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGTGTCCACAGCTGCGTaGACTGGTGTCCAGCCATCT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEVSTAA*TGVQPS
Trigger: AGATGGCTGGACACCAGTTCACGCAGCTGTGGACAC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR TCA 90 bp TTTTTCATACCTTCAGTGCTTAGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGGCACATTTCCTAGCGTaGTGGATCGTATGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: FFIPSVLRSGLFQVGKEKAHFLA*WIVCFL
Trigger: CAAGAAGCATACGATCCATCACGCTAGGAAATGTGC...CTTCTCTTTACCCACCTGGAATAAGCCAGACCTAAGCACTGAAGGTATGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp CTTTATTTCCATTTTTACAGGCCAGGTATAGAGGTGTCTGTCCTCCATCAGCAGCTGACAAAAGCACAGTaGTGTGCTCTGCCTTATTCT +
Preference number: 4 (lower is better)
Translates to: LYFHFYRPGIEVSVLHQQLTKAQ*CALPYS
Trigger: AGAATAAGGCAGAGCACATCACTGTGCTTTTGTCAG...CTGCTGATGGAGGACAGACACCTCTATACCTGGCCTGTAAAAATGGAAATAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp ATTTTAAGAGCATTCAGATTCTCCAGCAAATGCTTGCAGTCATCAGTGGCAACACTGAGACAGCCTTCTTaGGGACCTGACAAAAGCACA +
Preference number: 4 (lower is better)
Translates to: ILRAFRFSSKCLQSSVATLRQPS*GPDKST
Trigger: TGTGCTTTTGTCAGGTCCTCAAGAAGGCTGTCTCAG...TGTTGCCACTGATGACTGCAAGCATTTGCTGGAGAATCTGAATGCTCTTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACCGTCGCCATCTTCCTaGTCTAGCGGATCCGAATGC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEPSPSS*SSGSEC
Trigger: GCATTCGGATCCGCTAGAGCAGGAAGATGGCGACGG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000160373.8
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGCAGTGGGCCATGACTaGTTCAAGGATGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEAVGHD*FKDGEG
Trigger: CCCCTCTCCATCCTTGAAGCAGTCATGGCCCACTGC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR GCA 90 bp TGGGAACACTGGGTGACTTTACTTCTAGGAACAGGAAGAAAAGATTTAACTCTTATGTCCCTGAGCAGCTaGAGCACACAAGGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: WEHWVTLLLGTGRKDLTLMSLSS*STQGCE
Trigger: TTCACACCCTTGTGTGCTGCAGCTGCTCAGGGACAT...AAGAGTTAAATCTTTTCTTCCTGTTCCTAGAAGTAAAGTCACCCAGTGTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAACCAGTGTCCACAGCTaGGTGAACTGGTGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTETSVHS*VNWCPA
Trigger: GGCTGGACACCAGTTCACGCAGCTGTGGACACTGGT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR GCA 90 bp TTTTTCATACCTTCAGTGCTTAGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGTCAGTGGCAACATCATaGACAGTCCGATTGCACTTG +
Preference number: 4 (lower is better)
Translates to: FFIPSVLRSGLFQVGKEKSVATS*TVRLHL
Trigger: CAAGTGCAATCGGACTGTGCATGATGTTGCCACTGA...CTTCTCTTTACCCACCTGGAATAAGCCAGACCTAAGCACTGAAGGTATGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp CATGCCCAGGAACTACAGGACAAGACAGGAAATATTTTGGTCCAAGAAGTGCTTTCTCCAGCAAATGCTTaGAGTCATCAGTGGCAACAT +
Preference number: 4 (lower is better)
Translates to: HAQELQDKTGNILVQEVLSPANA*SHQWQH
Trigger: ATGTTGCCACTGATGACTGCAAGCATTTGCTGGAGA...AAGCACTTCTTGGACCAAAATATTTCCTGTCTTGTCCTGTAGTTCCTGGGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp TTTTTCATACCTTCAGTGCTTAGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGTTCCTTTTTGGAAAGTaGAGGGGCTTTCAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: FFIPSVLRSGLFQVGKEKFLFGK*RGFQCC
Trigger: GCAGCACTGAAAGCCCCTGCACTTTCCAAAAAGGAA...CTTCTCTTTACCCACCTGGAATAAGCCAGACCTAAGCACTGAAGGTATGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAACCCAGCGGAAATGCTaGTGCACCAGCAAGTCGGAG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTETQRKC*CTSKSE
Trigger: CTCCGACTTGCTGGTGCAGCAGCATTTCCGCTGGGT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATGCACCCAGCGGAAATaGTGCTGCACCAGCAAGTCG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTECTQRK*CCTSKS
Trigger: CGACTTGCTGGTGCAGCAGCATTTCCGCTGGGTGCA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACCCAGTCGACAATCTTaGACACAGGATCGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEPSRQS*TQDRRG
Trigger: CCCCCTGCGATCCTGTGTGCAAGATTGTCGACTGGG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAAGCGGCCAGACTTCCTaGGAGGACTGGTGTTCACCT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTESGQTS*EDWCSP
Trigger: AGGTGAACACCAGTCCTCGCAGGAAGTCTGGCCGCT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp CTAATGAACAGGTCTAGTAGCTGTTCCTTGGAAAAACCAGCATCTACTTCAGCTCTCCCATACCGTTCCTaGATAAATACCTCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LMNRSSSCSLEKPASTSALPYRS*INTSFL
Trigger: CAGGAAGGAGGTATTTATCCAGGAACGGTATGGGAG...AGCTGAAGTAGATGCTGGTTTTTCCAAGGAACAGCTACTAGACCTGTTCATTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACTTCCCGGTTCAGCTTaGCACGAAGCTGTTCCCGCT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTELPGSA*HEAVPA
Trigger: AGCGGGAACAGCTTCGTGCCAAGCTGAACCGGGAAG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATGGCCATGGTGGCACTaGTGCACACGCTCCCTTTTG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEWPWWH*CTRSLL
Trigger: CAAAAGGGAGCGTGTGCACCAGTGCCACCATGGCCA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACTGAGGAGCTATGCCTaGTGTTTGAGCGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTELRSYA*CLSGGR
Trigger: CCTCCCACCGCTCAAACACCAGGCATAGCTCCTCAG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACGACCAACTGGAGGGTaGGTGCCAACATCCCCTGTT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTERPTGG*VPTSPV
Trigger: AACAGGGGATGTTGGCACCCACCCTCCAGTTGGTCG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAACTGGTCCGACCAACTaGAGGGTGGGTGCCAACATC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTETGPTN*RVGANI
Trigger: GATGTTGGCACCCACCCTCCAGTTGGTCGGACCAGT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp AAGGGTATTTTAAGAGCATTCAGATTCTCCAGCAAATGCTTGCAGTCATCAGTGCCTTCTCTGTTGGCGTaGTTAATGAGGTCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: KGILRAFRFSSKCLQSSVPSLLA*LMRSAG
Trigger: TCCTGCAGACCTCATTAACCACGCCAACAGAGAAGG...CACTGATGACTGCAAGCATTTGCTGGAGAATCTGAATGCTCTTAAAATACCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp TGGGAACACTGGGTGACTTTACTTCTAGGAACAGGAAGAAAAGATTTAACTCTTTTGGAAGCAGCAATGTaGGCAGCAGTCCAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: WEHWVTLLLGTGRKDLTLLEAAM*AAVQPS
Trigger: AGAAGGCTGGACTGCTGCCCACATTGCTGCTTCCAA...AAGAGTTAAATCTTTTCTTCCTGTTCCTAGAAGTAAAGTCACCCAGTGTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp GATTTTCAAGAGGTGCCAAAAAGTCCCTCAATAACTCCGACAGTGAAGATTTTTGACAGGCCTTGGCGATaGTTCCCATCAGAAAGCAGT +
Preference number: 4 (lower is better)
Translates to: DFQEVPKSPSITPTVKIFDRPWR*FPSESS
Trigger: ACTGCTTTCTGATGGGAACCATCGCCAAGGCCTGTC...AAAAATCTTCACTGTCGGAGTTATTGAGGGACTTTTTGGCACCTCTTGAAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp AAGGGTATTTTAAGAGCATTCAGATTCTCCAGCAAATGCTTGCAGTCATCAGTGAAATCAGCTGTATGCTaGTCTAGCTCTGCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: KGILRAFRFSSKCLQSSVKSAVC*SSSALG
Trigger: CCCCAGAGCAGAGCTAGACCAGCATACAGCTGATTT...CACTGATGACTGCAAGCATTTGCTGGAGAATCTGAATGCTCTTAAAATACCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp CCAGCAAATGCTTGCAGTCATCAGTGGCAACATCATGCACAGTCCGATTGCACTGTATCTTGTTGTCCTTaGTTTCTGTGTGAAATAGAG +
Preference number: 4 (lower is better)
Translates to: PANACSHQWQHHAQSDCTVSCCP*FLCEIE
Trigger: CTCTATTTCACACAGAAACCAAGGACAACAAGATAC...AGTGCAATCGGACTGTGCATGATGTTGCCACTGATGACTGCAAGCATTTGCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
3UTR CAA 72 bp GGTATTTTAAGAGCATTCAGATTCTCCAGCAAATGCTaGCAGTCATCAGTGGCAACATCATGCACAGTCCGA +
Preference number: 4 (lower is better)
Translates to: GILRAFRFSSKC*QSSVATSCTVR
Trigger: TCGGACTGTGCATGATGTTGCCACTGATGACTGCAAGCATTTGCTGGAGAATCTGAATGCTCTTAAAATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGCTGCTTGCACTCTTTaGCCAGCATCAGGACCACCT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEAACTL*PASGPP
Trigger: AGGTGGTCCTGATGCTGGTCAAAGAGTGCAAGCAGC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATCTGGGCCTCCTCTATaGCTTTGCCTGAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTESGPPL*LCLRAA
Trigger: AGCAGCTCTCAGGCAAAGTCATAGAGGAGGCCCAGA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGGAGCTTGCGAGTTCTaGGGAGCTATGCCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEGACEF*GAMPGV
Trigger: AACACCAGGCATAGCTCCTCAGAACTCGCAAGCTCC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACAGCTGAGGGGAGGATaGCTTAGGAAGGTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEQLRGG*LRKVLL
Trigger: GAGGAGAACCTTCCTAAGTCATCCTCCCCTCAGCTG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGGTTTTGGTGGCAGCTaGGGGGAGGATGACTTAGGA +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEGFGGS*GEDDLG
Trigger: TCCTAAGTCATCCTCCCCTCAGCTGCCACCAAAACC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR TCA 90 bp AAAGATTTAACTCTTGAAACACCCAACTCAGTCTTTGATTTACTGTTGCTGCATGGTTTTGGTGGCAGCTaGGGGGAGGATGACTTAGGA +
Preference number: 4 (lower is better)
Translates to: KDLTLETPNSVFDLLLLHGFGGS*GEDDLG
Trigger: TCCTAAGTCATCCTCCCCTCAGCTGCCACCAAAACC...ATGCAGCAACAGTAAATCAAAGACTGAGTTGGGTGTTTCAAGAGTTAAATCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACACTCGAAATGTCCCTaGGCAGCTGCAGCACACAAG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEHSKCP*AAAAHK
Trigger: CTTGTGTGCTGCAGCTGCTCAGGGACATTTCGAGTG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR TCA 90 bp GGAACAGGAAGAAAAGATTTAACTCTTGAAACACCCAACTCAGTCTTTGATTTACACTCGAAATGTCCCTaGGCAGCTGCAGCACACAAG +
Preference number: 4 (lower is better)
Translates to: GTGRKDLTLETPNSVFDLHSKCP*AAAAHK
Trigger: CTTGTGTGCTGCAGCTGCTCAGGGACATTTCGAGTG...TAAATCAAAGACTGAGTTGGGTGTTTCAAGAGTTAAATCTTTTCTTCCTGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp AGATTGATCTCATACACATCAGAGACTTGCACAATCCTGGCTTCATCACTTGCTCTGACAAAAGCACAGTaGTGTGCTCTGCCTTATTCT +
Preference number: 4 (lower is better)
Translates to: RLISYTSETCTILASSLALTKAQ*CALPYS
Trigger: AGAATAAGGCAGAGCACATCACTGTGCTTTTGTCAG...AGCAAGTGATGAAGCCAGGATTGTGCAAGTCTCTGATGTGTATGAGATCAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416239.1
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACAGGGGGAGGGCGCCTaGCCTTTGAACTTATTCACA +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEQGEGA*PLNLFT
Trigger: TGTGAATAAGTTCAAAGGTCAGGCGCCCTCCCCCTG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACCACCTGCTTGTTCTTaGCACGCTCTTCCTCAAGGC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEPPACS*HALPQG
Trigger: GCCTTGAGGAAGAGCGTGGCAAGAACAAGCAGGTGG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACCATGGTGGCACTGGTaGACACGCTCCCTTTTGCAT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEPWWHW*TRSLLH
Trigger: ATGCAAAAGGGAGCGTGTGCACCAGTGCCACCATGG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR GCA 90 bp CCAGAGAGAGTCTCTGATCCAAATTCAACGTCAGTGATAGATCATTCTCTAAAGATTGACTTGGGCTTCTaGACTCAGCAGCAATCTCAC +
Preference number: 4 (lower is better)
Translates to: PERVSDPNSTSVIDHSLKIDLGF*TQQQSH
Trigger: GTGAGATTGCTGCTGAGTGCAGAAGCCCAAGTCAAT...CTTTAGAGAATGATCTATCACTGACGTTGAATTTGGATCAGAGACTCTCTCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp CTTTATTTCCATTTTTACAGGCCAGGTATAGAGGTGTCTGTCCTCCATCAGCAGAATCAGTGGTGTTATTaGAAGTCACGTCTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: LYFHFYRPGIEVSVLHQQNQWCY*KSRLPD
Trigger: GTCTGGAAGACGTGACTTGCAATAACACCACTGATT...CTGCTGATGGAGGACAGACACCTCTATACCTGGCCTGTAAAAATGGAAATAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp TCAGAGACTTGCACAATCCTGGCTTCATCACTTGCTAGATGCATGACTTTGAGCCACAGTGATGTGCTCTaGCTTATTCTTCCTCATAAA +
Preference number: 4 (lower is better)
Translates to: SETCTILASSLARCMTLSHSDVL*LILPHK
Trigger: TTTATGAGGAAGAATAAGGCAGAGCACATCACTGTG...GCTCAAAGTCATGCATCTAGCAAGTGATGAAGCCAGGATTGTGCAAGTCTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416239.1
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGCTTTGACCACAGCCTaGTGTCCTTGGCTAGGGTGT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEALTTA*CPWLGC
Trigger: ACACCCTAGCCAAGGACAGCAGGCTGTGGTCAAAGC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR GCA 90 bp CTTTCAGTGCTGCGATTTTCAAGAGGTGCCAAAAAGTCCCTCAATAACTCCGACTTTTCATACCTTCAGTaGTTAGGTCTGGCTTATTCC +
Preference number: 4 (lower is better)
Translates to: LSVLRFSRGAKKSLNNSDFSYLQ*LGLAYS
Trigger: GGAATAAGCCAGACCTAAGCACTGAAGGTATGAAAA...GTCGGAGTTATTGAGGGACTTTTTGGCACCTCTTGAAAATCGCAGCACTGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp CTAATGAACAGGTCTAGTAGCTGTTCCTTGGAAAAACCAGCATCTACTTCAGCTTATCAGACTCAGACTTaGTGGAGCACATGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: LMNRSSSCSLEKPASTSAYQTQT*WSTCSE
Trigger: TTCAGAGCATGTGCTCCAGCAAGTCTGAGTCTGATA...AGCTGAAGTAGATGCTGGTTTTTCCAAGGAACAGCTACTAGACCTGTTCATTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATGTCAATACCTGGTCTaGCCATGGTGGCACTGGTGC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTECQYLV*PWWHWC
Trigger: GCACCAGTGCCACCATGGCCAGACCAGGTATTGACA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACTGCCTGTCAATACCTaGTCTGGCCATGGTGGCACT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTELPVNT*SGHGGT
Trigger: AGTGCCACCATGGCCAGACCAGGTATTGACAGGCAG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGTGGGGGTGTGCTACTaGTTGGATCTGGTGTTGAGC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEVGVCY*LDLVLS
Trigger: GCTCAACACCAGATCCAACCAGTAGCACACCCCCAC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAAGCGTTACTGGGAAGTaGGGGTGTGCTACTGGTTGG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTESVTGK*GCATGW
Trigger: CCAACCAGTAGCACACCCCCACTTCCCAGTAACGCT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACACAGCTGCGTGAACTaGTGTCCAGCCATCTGTGGT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEHSCVN*CPAICG
Trigger: ACCACAGATGGCTGGACACCAGTTCACGCAGCTGTG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACTTGTCTCTCCTTTCTaGCTCAAGCCCTCCGTGCCT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTELVSPF*LKPSVP
Trigger: AGGCACGGAGGGCTTGAGCCAGAAAGGAGAGACAAG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp ATTTTAAGAGCATTCAGATTCTCCAGCAAATGCTTGCAGTCATCAGTGGCAACAGGGAGATTGTTTCACTaGGATCAGACAAGCGCTACT +
Preference number: 4 (lower is better)
Translates to: ILRAFRFSSKCLQSSVATGRLFH*DQTSAT
Trigger: AGTAGCGCTTGTCTGATCCCAGTGAAACAATCTCCC...TGTTGCCACTGATGACTGCAAGCATTTGCTGGAGAATCTGAATGCTCTTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACCTGGAGACAGGCCTTaGCGATGGTTCCCATCAGAA +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEPGDRP*RWFPSE
Trigger: TTCTGATGGGAACCATCGCCAAGGCCTGTCTCCAGG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp GATTGCACTTGTCTCTCCTTTCTGGCTCAAGCCCTCCGTGCCTACACAAGATTTTATAACTGGAAACTATaGATAAAGGGAAACTTCCTC +
Preference number: 4 (lower is better)
Translates to: DCTCLSFLAQALRAYTRFYNWKL*IKGNFL
Trigger: GAGGAAGTTTCCCTTTATCCATAGTTTCCAGTTATA...AAATCTTGTGTAGGCACGGAGGGCTTGAGCCAGAAAGGAGAGACAAGTGCAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp CCAGAGAGAGTCTCTGATCCAAATTCAACGTCAGTGATAGATCATTCTCTAAAGGCAGCTCGGATTTACTaGGAGTATCCACATCAAACT +
Preference number: 4 (lower is better)
Translates to: PERVSDPNSTSVIDHSLKAARIY*EYPHQT
Trigger: AGTTTGATGTGGATACTCTCAGTAAATCCGAGCTGC...CTTTAGAGAATGATCTATCACTGACGTTGAATTTGGATCAGAGACTCTCTCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATCTTGCAGTGGGCCATaGCTGCTTCAAGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTESCSGP*LLQGWR
Trigger: TCTCCATCCTTGAAGCAGTCATGGCCCACTGCAAGA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGGTTGGATCTGGTGTTaGGCCAGTGCTTGGTCCATT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEGWIWC*ASAWSI
Trigger: AATGGACCAAGCACTGGCTCAACACCAGATCCAACC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAAGGCGAGACATCTCTTaGCGGAGGACTTTGGGTAGT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTERRDIS*RRTLGS
Trigger: ACTACCCAAAGTCCTCCGTCAAGAGATGTCTCGCCT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGAGGGAGCACCTGCTTaGGGGCTTGTAAATCTTGAC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEEGAPA*GLVNLD
Trigger: GTCAAGATTTACAAGCCCTCAAGCAGGTGCTCCCTC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR TCA 90 bp ACCAGTAGTATTAGTTTCAGATTGATCTCATACACATCAGAGACTTGCACAATCGCCTTCTTGAGGACCTaGCAAAAGCACAGTGATGTG +
Preference number: 4 (lower is better)
Translates to: TSSISFRLISYTSETCTIAFLRT*QKHSDV
Trigger: CACATCACTGTGCTTTTGTCAGGTCCTCAAGAAGGC...GATTGTGCAAGTCTCTGATGTGTATGAGATCAATCTGAAACTAATACTACTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416239.1
CDS-3UTR TCA 90 bp CCAGAGAGAGTCTCTGATCCAAATTCAACGTCAGTGATAGATCATTCTCTAAAGTGCTCTGAAGTTCCTTaGCAAGATCTGCTTCGTCAT +
Preference number: 4 (lower is better)
Translates to: PERVSDPNSTSVIDHSLKCSEVP*QDLLRH
Trigger: ATGACGAAGCAGATCTTGTCAAGGAACTTCAGAGCA...CTTTAGAGAATGATCTATCACTGACGTTGAATTTGGATCAGAGACTCTCTCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
CDS-3UTR TCA 90 bp TGGGAACACTGGGTGACTTTACTTCTAGGAACAGGAAGAAAAGATTTAACTCTTCTGGAGCACATGCTCTaGAGTTCCTTGACAAGATCT +
Preference number: 4 (lower is better)
Translates to: WEHWVTLLLGTGRKDLTLLEHML*SSLTRS
Trigger: AGATCTTGTCAAGGAACTTCAGAGCATGTGCTCCAG...AAGAGTTAAATCTTTTCTTCCTGTTCCTAGAAGTAAAGTCACCCAGTGTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAAGCAGCAGCCAGCTGTaGGGACATCCTTTCTTGCAT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTESSSQL*GHPFLH
Trigger: ATGCAAGAAAGGATGTCCGCACAGCTGGCTGCTGCT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACCAGCTTCTTTTGTCTaGTCTCAGCAGCAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEPASFV*SQQQPA
Trigger: AGCTGGCTGCTGCTGAGAGCAGACAAAAGAAGCTGG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR GCA 90 bp GGAAGAAAAGATTTAACTCTTGAAACACCCAACTCAGTCTTTGATTTACTGTTGCCAGCTTCTTTTGTCTaGTCTCAGCAGCAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GRKDLTLETPNSVFDLLLPASFV*SQQQPA
Trigger: AGCTGGCTGCTGCTGAGAGCAGACAAAAGAAGCTGG...CAACAGTAAATCAAAGACTGAGTTGGGTGTTTCAAGAGTTAAATCTTTTCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGCAGCCAGCTTCTTGTaGTCTTGCTCAAGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEAASFL*SCSRAC
Trigger: ACAAGCCCTTGAGCAAGAGCACAAGAAGCTGGCTGC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAAGCATCAGGACCACCTaGTTGTTCTTGCCACGCTCT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTESIRTT*LFLPRS
Trigger: AGAGCGTGGCAAGAACAAGCAGGTGGTCCTGATGCT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGAGGTCAGTGGTGTGTaGTTCTTCCCGGTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEEVSGV*FFPVQL
Trigger: AAGCTGAACCGGGAAGAAGCACACACCACTGACCTC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR GCA 90 bp TGGGAACACTGGGTGACTTTACTTCTAGGAACAGGAAGAAAAGATTTAACTCTTGGTGAATGTAAACTGTaGATAGGTGGAGCTTGCGAG +
Preference number: 4 (lower is better)
Translates to: WEHWVTLLLGTGRKDLTLGECKL*IGGACE
Trigger: CTCGCAAGCTCCACCTATGCACAGTTTACATTCACC...AAGAGTTAAATCTTTTCTTCCTGTTCCTAGAAGTAAAGTCACCCAGTGTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAATGTCCCTGAGCAGCTaGAGCACACAAGGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEMSLSS*STQGCE
Trigger: TTCACACCCTTGTGTGCTGCAGCTGCTCAGGGACAT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGGCTCAAGCCCTCCGTaGCTACACAAGATTTCTAGG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEGSSPP*LHKISR
Trigger: CCTAGAAATCTTGTGTAGGCACGGAGGGCTTGAGCC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR GCA 90 bp AGATTGATCTCATACACATCAGAGACTTGCACAATCCTGGCTTCATCACTTGCTAATCAGTGGTGTTATTaGAAGTCACGTCTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: RLISYTSETCTILASSLANQWCY*KSRLPD
Trigger: GTCTGGAAGACGTGACTTGCAATAACACCACTGATT...AGCAAGTGATGAAGCCAGGATTGTGCAAGTCTCTGATGTGTATGAGATCAATCT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416239.1
CDS-3UTR GCA 90 bp ACCAGTAGTATTAGTTTCAGATTGATCTCATACACATCAGAGACTTGCACAATCGGATCGTATGCTTCTTaGACTGAGGCCGATGTTGGA +
Preference number: 4 (lower is better)
Translates to: TSSISFRLISYTSETCTIGSYAS*TEADVG
Trigger: TCCAACATCGGCCTCAGTGCAAGAAGCATACGATCC...GATTGTGCAAGTCTCTGATGTGTATGAGATCAATCTGAAACTAATACTACTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416239.1
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACTTCGTAAGAACCTCTaGAGCAGTCCTTGCATGGGC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTELRKNL*SSPCMG
Trigger: GCCCATGCAAGGACTGCTGCAGAGGTTCTTACGAAG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACTAGGGGACTCCCTGTaGAAGGTTTTACAGGCATGG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTELGDSL*KVLQAW
Trigger: CCATGCCTGTAAAACCTTCCACAGGGAGTCCCCTAG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGTTTGCACTTGGAGGTaGGAAAGCGGGTACAGAAGC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEVCTWR*ESGYRS
Trigger: GCTTCTGTACCCGCTTTCCCACCTCCAAGTGCAAAC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CCA 90 bp CTAATGAACAGGTCTAGTAGCTGTTCCTTGGAAAAACCAGCATCTACTTCAGCTCTAAATCTAGCTGCTTaGATTCGTGGGTTTAGACCT +
Preference number: 4 (lower is better)
Translates to: LMNRSSSCSLEKPASTSALNLAA*IRGFRP
Trigger: AGGTCTAAACCCACGAATCCAAGCAGCTAGATTTAG...AGCTGAAGTAGATGCTGGTTTTTCCAAGGAACAGCTACTAGACCTGTTCATTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACTTGAGTTGGGGGTGTaGTGGAGAAGGAGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTELELGV*WRRSLG
Trigger: TCCCAAACTCCTTCTCCACCACACCCCCAACTCAAG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp CCAGAGAGAGTCTCTGATCCAAATTCAACGTCAGTGATAGATCATTCTCTAAAGATAATAACCTTGAGTTaGGGGTGTGGTGGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: PERVSDPNSTSVIDHSLKIITLS*GCGGEG
Trigger: TCCTTCTCCACCACACCCCCAACTCAAGGTTATTAT...CTTTAGAGAATGATCTATCACTGACGTTGAATTTGGATCAGAGACTCTCTCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATCCCTTGTGGCAAACTaGAAGGAGTCGAAGCCACAG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTESLVAN*KESKPQ
Trigger: CTGTGGCTTCGACTCCTTCCAGTTTGCCACAAGGGA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACACCCTGTTCCCTTGTaGCAAACTGGAAGGAGTCGA +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEHPVPL*QTGRSR
Trigger: TCGACTCCTTCCAGTTTGCCACAAGGGAACAGGGTG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATCTGAACATGCAGGTTaGTTCAGTCCGGGGGTTGCA +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTESEHAG*FSPGVA
Trigger: TGCAACCCCCGGACTGAACCAACCTGCATGTTCAGA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000160373.8
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATCAGCAGCATTGACTTaGGCTTCTGCACTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTESAALT*ASALSS
Trigger: GCTGCTGAGTGCAGAAGCCCAAGTCAATGCTGCTGA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATTGGAAGCAGCAATGTaGGCAGCAGTCCAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTELEAAM*AAVQPS
Trigger: AGAAGGCTGGACTGCTGCCCACATTGCTGCTTCCAA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp AGATTGATCTCATACACATCAGAGACTTGCACAATCCTGGCTTCATCACTTGCTCGATGTTGGAATCAGTaGTGTTATTGCAAGTCACGT +
Preference number: 4 (lower is better)
Translates to: RLISYTSETCTILASSLARCWNQ*CYCKSR
Trigger: ACGTGACTTGCAATAACACCACTGATTCCAACATCG...AGCAAGTGATGAAGCCAGGATTGTGCAAGTCTCTGATGTGTATGAGATCAATCT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416239.1
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGACAGGCCTTGGCGATaGTTCCCATCAGAAAGCAGT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEDRPWR*FPSESS
Trigger: ACTGCTTTCTGATGGGAACCATCGCCAAGGCCTGTC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAACTTCCTGCGAGGACTaGTGTTCACCTTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTETSCED*CSPFSR
Trigger: CCTGGAGAAAGGTGAACACCAGTCCTCGCAGGAAGT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACTGGCTTATTCCAGGTaGGTAAAGAGAAGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTELAYSR*VKRSGQ
Trigger: CTGGCCGCTTCTCTTTACCCACCTGGAATAAGCCAG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGTATTTTCTGAGACGTaGCCAGGGCTGAAACGGCAC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEVFSET*PGLKRH
Trigger: GTGCCGTTTCAGCCCTGGCCACGTCTCAGAAAATAC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446636.5
3UTR CAA 72 bp ACTGGTGTCCAGCCATCTGTGGTTTTTACACTTCGATaGGTTCCAGCTTCCAACAAGAGTTTAATACATTCT +
Preference number: 4 (lower is better)
Translates to: TGVQPSVVFTLR*VPASNKSLIHS
Trigger: AGAATGTATTAAACTCTTGTTGGAAGCTGGAACCAATCGAAGTGTAAAAACCACAGATGGCTGGACACCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATCAAGGGCTTGTAGCTaGAGCTTCTCCATTTCCAGC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTESRACS*SFSISS
Trigger: GCTGGAAATGGAGAAGCTTCAGCTACAAGCCCTTGA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGACAAGGGAACTGTCTaGACATGCAGGTTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEDKGTV*TCRLVQ
Trigger: CTGAACCAACCTGCATGTTCAGACAGTTCCCTTGTC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000160373.8
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAACCTGGTCTACAGGATaGGGCACTAACGGGGTTTAT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTETWSTG*GTNGVY
Trigger: ATAAACCCCGTTAGTGCCTCATCCTGTAGACCAGGT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000160373.8
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGTATGCTTCTTGCACTaGGGCCGATGTTGGAATCAG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEVCFLH*GRCWNQ
Trigger: CTGATTCCAACATCGGCCTCAGTGCAAGAAGCATAC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGCCTTCTTGAGGACCTaGCAAAAGCACAGTGATGTG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEAFLRT*QKHSDV
Trigger: CACATCACTGTGCTTTTGTCAGGTCCTCAAGAAGGC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACTGAGACAGCCTTCTTaGGGACCTGACAAAAGCACA +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTELRQPS*GPDKST
Trigger: TGTGCTTTTGTCAGGTCCTCAAGAAGGCTGTCTCAG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR TCA 90 bp ACCAGTAGTATTAGTTTCAGATTGATCTCATACACATCAGAGACTTGCACAATCCATAAGTCACACTACTaGGACAGCCTTCTTGAGGAC +
Preference number: 4 (lower is better)
Translates to: TSSISFRLISYTSETCTIHKSHY*DSLLED
Trigger: GTCCTCAAGAAGGCTGTCTCAGTAGTGTGACTTATG...GATTGTGCAAGTCTCTGATGTGTATGAGATCAATCTGAAACTAATACTACTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416239.1
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAATCTGCTTCGTCATCTaGACCCAGAGAGAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEICFVI*TQRESL
Trigger: CAGAGACTCTCTCTGGGTTCAGATGACGAAGCAGAT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR TCA 90 bp CCAGAGAGAGTCTCTGATCCAAATTCAACGTCAGTGATAGATCATTCTCTAAAGAATCAGCAATCTTGCTaGTATCAGACTCAGACTTGC +
Preference number: 4 (lower is better)
Translates to: PERVSDPNSTSVIDHSLKNQQSC*YQTQTC
Trigger: GCAAGTCTGAGTCTGATATCAGCAAGATTGCTGATT...CTTTAGAGAATGATCTATCACTGACGTTGAATTTGGATCAGAGACTCTCTCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACTGCATTCAGTAGTTTaGTGGCTGCTGAGAGGACTG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTELHSVV*WLLRGL
Trigger: CAGTCCTCTCAGCAGCCATCAAACTACTGAATGCAG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR TCA 90 bp AAAGATTTAACTCTTGAAACACCCAACTCAGTCTTTGATTTACTGTTGCTGCATCTGCATTCAGTAGTTTaGTGGCTGCTGAGAGGACTG +
Preference number: 4 (lower is better)
Translates to: KDLTLETPNSVFDLLLLHLHSVV*WLLRGL
Trigger: CAGTCCTCTCAGCAGCCATCAAACTACTGAATGCAG...ATGCAGCAACAGTAAATCAAAGACTGAGTTGGGTGTTTCAAGAGTTAAATCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGCGGACATCCTTTCTTaGATTTTCTTGCAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEADILS*IFLQWA
Trigger: GGCCCACTGCAAGAAAATGCAAGAAAGGATGTCCGC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAACTTTGCCTGAGAGCTaGTTGCACTCTTTGACCAGC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTETLPES*LHSLTS
Trigger: GCTGGTCAAAGAGTGCAAGCAGCTCTCAGGCAAAGT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGGATCGTATGCTTCTTaGACTGAGGCCGATGTTGGA +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEGSYAS*TEADVG
Trigger: TCCAACATCGGCCTCAGTGCAAGAAGCATACGATCC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAAGGGGCTTTCAGTGCTaGGATTTTCAAGAGGTGCCA +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTERGFQC*DFQEVP
Trigger: TGGCACCTCTTGAAAATCGCAGCACTGAAAGCCCCT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATGCAGGGGCTTTCAGTaGTGCGATTTTCAAGAGGTG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTECRGFQ*CDFQEV
Trigger: CACCTCTTGAAAATCGCAGCACTGAAAGCCCCTGCA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAACTGTCACTTGGGCATaGCCAGGAACTACAGGACAA +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTETVTWA*PGTTGQ
Trigger: TTGTCCTGTAGTTCCTGGGCATGCCCAAGTGACAGT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATTCTTGAACTCTGGGTaGGATGACGCCATTCCACAG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEFLNSG*DDAIPQ
Trigger: CTGTGGAATGGCGTCATCGCACCCAGAGTTCAAGAA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGGGAGGGGACAGCCATaGAGTACAGCTTTATTTAGC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEGRGQP*STALFS
Trigger: GCTAAATAAAGCTGTACTGCATGGCTGTCCCCTCCC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR GCA 90 bp TTGGAAAAACCAGCATCTACTTCAGCTCTCACTATTTCACAGGAGAATCCTGCATTGTATTACTGCTGCTaGTGCTTCTTTTGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: LEKPASTSALTISQENPALYYCC*CFFWCS
Trigger: AGAACACCAAAAGAAGCAGCAGCAGCAGTAATACAA...TGCAGGATTCTCCTGTGAAATAGTGAGAGCTGAAGTAGATGCTGGTTTTTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGGATGGAGAGGGGGTTaGTACAAACTGGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEGWRGG*YKLASS
Trigger: AGAAGAAGCCAGTTTGTACCAACCCCCTCTCCATCC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAACGTCTTCGAGCTTCTaGGCCTCCTCTATGACTTTG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTETSSSF*ASSMTL
Trigger: CAAAGTCATAGAGGAGGCCCAGAAGCTCGAAGACGT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATGGAAGAGAGAGGCTTaGTTTGCTGTCACTTCCCCT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEWKREA*FAVTSP
Trigger: AGGGGAAGTGACAGCAAACCAAGCCTCTCTCTTCCA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGTCACTAGGTCTGTCTaGCATGCAACAGACCTTGTC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEVTRSV*HATDLV
Trigger: GACAAGGTCTGTTGCATGCCAGACAGACCTAGTGAC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CCA 90 bp AAAGATTTAACTCTTGAAACACCCAACTCAGTCTTTGATTTACTGTTGCTGCATGTCACTAGGTCTGTCTaGCATGCAACAGACCTTGTC +
Preference number: 4 (lower is better)
Translates to: KDLTLETPNSVFDLLLLHVTRSV*HATDLV
Trigger: GACAAGGTCTGTTGCATGCCAGACAGACCTAGTGAC...ATGCAGCAACAGTAAATCAAAGACTGAGTTGGGTGTTTCAAGAGTTAAATCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATCCGAGCTAGTTGTTTaGCCACTAGGTTGTCACGAC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTESELVV*PLGCHD
Trigger: GTCGTGACAACCTAGTGGCCAAACAACTAGCTCGGA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAATCTATGGATGGTTTTaGTGGCAGCTGAGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEIYGWF*WQLRGG
Trigger: TCCTCCCCTCAGCTGCCACCAAAACCATCCATAGAT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACCTTCTCTGTTGGCGTaGTTAATGAGGTCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEPSLLA*LMRSAG
Trigger: TCCTGCAGACCTCATTAACCACGCCAACAGAGAAGG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGCTTGCAGTCATCAGTaGCAACATCATGCACAGTCC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEACSHQ*QHHAQS
Trigger: GGACTGTGCATGATGTTGCCACTGATGACTGCAAGC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp ACCAGTAGTATTAGTTTCAGATTGATCTCATACACATCAGAGACTTGCACAATCTCTGGAGAGGGATCATaGAGGCATAAGTCACACTAC +
Preference number: 4 (lower is better)
Translates to: TSSISFRLISYTSETCTISGEGS*RHKSHY
Trigger: GTAGTGTGACTTATGCCTCCATGATCCCTCTCCAGA...GATTGTGCAAGTCTCTGATGTGTATGAGATCAATCTGAAACTAATACTACTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416239.1
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACACTTCACTGTCACTTaGGCATGCCCAGGAACTACA +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEHFTVT*ACPGTT
Trigger: TGTAGTTCCTGGGCATGCCCAAGTGACAGTGAAGTG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAACAGCCTGCTGTCCTTaGCTAGGGTGTCTTTTAGCA +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTETACCP*LGCLLA
Trigger: TGCTAAAAGACACCCTAGCCAAGGACAGCAGGCTGT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAAAATCAGCTGTATGCTaGTCTAGCTCTGCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEKSAVC*SSSALG
Trigger: CCCCAGAGCAGAGCTAGACCAGCATACAGCTGATTT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACTCTATGACTTTGCCTaGGAGCTGCTTGCACTCTTT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTELYDFA*ELLALF
Trigger: AAAGAGTGCAAGCAGCTCTCAGGCAAAGTCATAGAG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATGTCTATCTCCTCTTTaGGGTCAGTGGTGTGTGCTT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTECLSPL*GQWCVL
Trigger: AAGCACACACCACTGACCTCAAAGAGGAGATAGACA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR TCA 90 bp TGGGAACACTGGGTGACTTTACTTCTAGGAACAGGAAGAAAAGATTTAACTCTTTCGTTAGCATTGCCCTaGAATCTAAATCTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: WEHWVTLLLGTGRKDLTLSLALP*NLNLAA
Trigger: AGCAGCTAGATTTAGATTTCAGGGCAATGCTAACGA...AAGAGTTAAATCTTTTCTTCCTGTTCCTAGAAGTAAAGTCACCCAGTGTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAAGGGCTTGTAAATCTTaGCAGTGCTTGGGTCACAGT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTERACKS*QCLGHS
Trigger: ACTGTGACCCAAGCACTGTCAAGATTTACAAGCCCT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAACTCGTGCTACACCATaGGTCTTTAAACTGGTCCGA +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTETRATP*VFKLVR
Trigger: TCGGACCAGTTTAAAGACTCATGGTGTAGCACGAGT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACAGCACACAAGGGTGTaGAGCCATTTTTATCAGCAG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEQHTRV*SHFYQQ
Trigger: CTGCTGATAAAAATGGCTTCACACCCTTGTGTGCTG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACGGACTCCTCCTCATTaGAAGAATTTCCATGAGCTG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTERTPPH*KNFHEL
Trigger: CAGCTCATGGAAATTCTTTCAATGAGGAGGAGTCCG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACAAGTCAAAGACACTTaGCTCGGACTCCTCCTCATT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEQVKDT*LGLLLI
Trigger: AATGAGGAGGAGTCCGAGTCAAGTGTCTTTGACTTG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGCACATTTCCTAGCGTaGTGGATCGTATGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEAHFLA*WIVCFL
Trigger: CAAGAAGCATACGATCCATCACGCTAGGAAATGTGC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACATAAGTCACACTACTaGGACAGCCTTCTTGAGGAC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEHKSHY*DSLLED
Trigger: GTCCTCAAGAAGGCTGTCTCAGTAGTGTGACTTATG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAATTGCTCAACCAGCCTaGGGTAGTTCTGCATCATCT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEIAQPA*GSSASS
Trigger: AGATGATGCAGAACTACCTCAGGCTGGTTGAGCAAT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAAGGGCGCCTGACCTTTaGACTTATTCACAACTTTCC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTERAPDL*TYSQLS
Trigger: GGAAAGTTGTGAATAAGTTCAAAGGTCAGGCGCCCT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGACAATATTGCTTCTTaGACTCTGGGTGCGATGACG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEDNIAS*TLGAMT
Trigger: CGTCATCGCACCCAGAGTTCAAGAAGCAATATTGTC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACCCAGAGAGAGTCTCTaGTCCAAATTCAACGTCAGT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEPRESL*SKFNVS
Trigger: ACTGACGTTGAATTTGGATCAGAGACTCTCTCTGGG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR TCA 90 bp GGAAGAAAAGATTTAACTCTTGAAACACCCAACTCAGTCTTTGATTTACTGTTGCCCAGAGAGAGTCTCTaGTCCAAATTCAACGTCAGT +
Preference number: 4 (lower is better)
Translates to: GRKDLTLETPNSVFDLLLPRESL*SKFNVS
Trigger: ACTGACGTTGAATTTGGATCAGAGACTCTCTCTGGG...CAACAGTAAATCAAAGACTGAGTTGGGTGTTTCAAGAGTTAAATCTTTTCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACTGGAGCACATGCTCTaGAGTTCCTTGACAAGATCT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTELEHML*SSLTRS
Trigger: AGATCTTGTCAAGGAACTTCAGAGCATGTGCTCCAG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR TCA 90 bp GATTTTCAAGAGGTGCCAAAAAGTCCCTCAATAACTCCGACAGTGAAGATTTTTACCCAACTCAGTCTTTaGTTTACTGTTGCTGCATTC +
Preference number: 4 (lower is better)
Translates to: DFQEVPKSPSITPTVKIFTQLSL*FTVAAF
Trigger: GAATGCAGCAACAGTAAATCAAAGACTGAGTTGGGT...AAAAATCTTCACTGTCGGAGTTATTGAGGGACTTTTTGGCACCTCTTGAAAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAACCTTTTGTATTTTCTaGGACGTGGCCAGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTETFCIF*DVARAE
Trigger: TTCAGCCCTGGCCACGTCTCAGAAAATACAAAAGGT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000446636.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATTTGTCACCAGCACCTaGTTCATAGTCTCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEFVTST*FIVSLE
Trigger: CTCCAGAGAGACTATGAAGCAGGTGCTGGTGACAAA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGAGAGAGGCTTGGTTTaGTGTCACTTCCCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEERGLV*CHFPFS
Trigger: TGAAAAGGGGAAGTGACAGCAAACCAAGCCTCTCTC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACTGGTGTTGAGCCAGTaGTTGGTCCATTTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTELVLSQ*LVHFPQ
Trigger: TTGAGGAAAATGGACCAAGCACTGGCTCAACACCAG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGGTGAATGTAAACTGTaGATAGGTGGAGCTTGCGAG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEGECKL*IGGACE
Trigger: CTCGCAAGCTCCACCTATGCACAGTTTACATTCACC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGGGTTTAGACCTGGATaGAAAGAGGTGTTGGCACAT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEGFRPG*KEVLAH
Trigger: ATGTGCCAACACCTCTTTGCATCCAGGTCTAAACCC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAATTGACTTGGGCTTCTaGACTCAGCAGCAATCTCAC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEIDLGF*TQQQSH
Trigger: GTGAGATTGCTGCTGAGTGCAGAAGCCCAAGTCAAT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACAACAGGCTTGGATATaGCTTCAGGACTCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEQQAWI*LQDSLL
Trigger: GAGAAGAGAGTCCTGAAGGCATATCCAAGCCTGTTG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGTGGTTAATGAGGTCTaGAGGAACAACAGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEVVNEV*RNNRLG
Trigger: TCCAAGCCTGTTGTTCCTGCAGACCTCATTAACCAC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATCAGTGGCAACATCATaGACAGTCCGATTGCACTTG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTESVATS*TVRLHL
Trigger: CAAGTGCAATCGGACTGTGCATGATGTTGCCACTGA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATTCCTTTTTGGAAAGTaGAGGGGCTTTCAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEFLFGK*RGFQCC
Trigger: GCAGCACTGAAAGCCCCTGCACTTTCCAAAAAGGAA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACTCCCATACCGTTCCTaGATAAATACCTCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTELPYRS*INTSFL
Trigger: CAGGAAGGAGGTATTTATCCAGGAACGGTATGGGAG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGGGGTTGGTACAAACTaGCTTCTTCTCTTTGTCACC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEGVGTN*LLLFVT
Trigger: GGTGACAAAGAGAAGAAGCCAGTTTGTACCAACCCC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACATGAGTCTTTAAACTaGTCCGACCAACTGGAGGGT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEHESLN*SDQLEG
Trigger: ACCCTCCAGTTGGTCGGACCAGTTTAAAGACTCATG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATTTTGTTATCAACTTTaGCCCCTGTGTTCGAGGCCC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEFCYQL*PLCSRP
Trigger: GGGCCTCGAACACAGGGGCCAAAGTTGATAACAAAA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACAGGAACAACAGGCTTaGATATGCCTTCAGGACTCT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEQEQQA*ICLQDS
Trigger: AGAGTCCTGAAGGCATATCCAAGCCTGTTGTTCCTG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATCTGGAGAGGGATCATaGAGGCATAAGTCACACTAC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTESGEGS*RHKSHY
Trigger: GTAGTGTGACTTATGCCTCCATGATCCCTCTCCAGA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGGGAGATTGTTTCACTaGGATCAGACAAGCGCTACT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEGRLFH*DQTSAT
Trigger: AGTAGCGCTTGTCTGATCCCAGTGAAACAATCTCCC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACAGACTCAGACTTGCTaGAGCACATGCTCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEQTQTC*STCSEV
Trigger: AACTTCAGAGCATGTGCTCCAGCAAGTCTGAGTCTG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
3UTR CAA 72 bp TGTTTTCACATTCCAAGTCATCAGAACCATAGTTGCTaGGTTCAATCTCACCCACTGAAATCCTTAAGGGTA +
Preference number: 4 (lower is better)
Translates to: CFHIPSHQNHSC*VQSHPLKSLRV
Trigger: TACCCTTAAGGATTTCAGTGGGTGAGATTGAACCAAGCAACTATGGTTCTGATGACTTGGAATGTGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGCAGCTCGGATTTACTaGGAGTATCCACATCAAACT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEAARIY*EYPHQT
Trigger: AGTTTGATGTGGATACTCTCAGTAAATCCGAGCTGC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR TCA 90 bp TGGGAACACTGGGTGACTTTACTTCTAGGAACAGGAAGAAAAGATTTAACTCTTAGTTGTTTTTCCATCTaGGCTTCCATTTCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: WEHWVTLLLGTGRKDLTLSCFSI*ASISVL
Trigger: AAGCACAGAAATGGAAGCTCAGATGGAAAAACAACT...AAGAGTTAAATCTTTTCTTCCTGTTCCTAGAAGTAAAGTCACCCAGTGTTCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGCATTGATAATAAAGTaGCATTTCCCTGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEALIIK*HFPGQQ
Trigger: CTGCTGCCCAGGGAAATGTCACTTTATTATCAATGC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATTTTATCAGCAGCATTaGCTTGGGCTTCTGCACTCA +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEFYQQH*LGLLHS
Trigger: TGAGTGCAGAAGCCCAAGTCAATGCTGCTGATAAAA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACTGACAAAAGCACAGTaGTGTGCTCTGCCTTATTCT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTELTKAQ*CALPYS
Trigger: AGAATAAGGCAGAGCACATCACTGTGCTTTTGTCAG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATGCTCTGAAGTTCCTTaGCAAGATCTGCTTCGTCAT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTECSEVP*QDLLRH
Trigger: ATGACGAAGCAGATCTTGTCAAGGAACTTCAGAGCA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAACTGACCTCCTTTTGTaGCACTGGCATTCTCAGATT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTETDLLL*HWHSQI
Trigger: AATCTGAGAATGCCAGTGTCACAAAAGGAGGTCAGT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATCTCCAGCAAATGCTTaGAGTCATCAGTGGCAACAT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTESPANA*SHQWQH
Trigger: ATGTTGCCACTGATGACTGCAAGCATTTGCTGGAGA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAAGATTCTCCAGCAAATaGTTGCAGTCATCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTERFSSK*LQSSVA
Trigger: TGCCACTGATGACTGCAAGCATTTGCTGGAGAATCT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGTGCTTCAGGCAGAGTaGAAGCTGATGTACTATGTA +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEVLQAE*KLMYYV
Trigger: TACATAGTACATCAGCTTGCACTCTGCCTGAAGCAC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATTCACAGGAGAATCCTaGAGCCATTTGTCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEFTGES*SHLSVL
Trigger: AAGCACAGACAAATGGCTGCAGGATTCTCCTGTGAA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR GCA 90 bp GGAACAGGAAGAAAAGATTTAACTCTTGAAACACCCAACTCAGTCTTTGATTTATTCACAGGAGAATCCTaGAGCCATTTGTCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: GTGRKDLTLETPNSVFDLFTGES*SHLSVL
Trigger: AAGCACAGACAAATGGCTGCAGGATTCTCCTGTGAA...TAAATCAAAGACTGAGTTGGGTGTTTCAAGAGTTAAATCTTTTCTTCCTGTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACTTTTAGCAGTTGTCTaGCCAAAGCCAGGTTGTCTT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTELLAVV*PKPGCL
Trigger: AAGACAACCTGGCTTTGGGCAGACAACTGCTAAAAG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATTGAAATCAGCTGTATaGTGGTCTAGCTCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTELKSAV*WSSSAL
Trigger: CAGAGCAGAGCTAGACCAGCATACAGCTGATTTCAA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR GCA 90 bp TGGGAACACTGGGTGACTTTACTTCTAGGAACAGGAAGAAAAGATTTAACTCTTTTTTCATACCTTCAGTaGTTAGGTCTGGCTTATTCC +
Preference number: 4 (lower is better)
Translates to: WEHWVTLLLGTGRKDLTLFSYLQ*LGLAYS
Trigger: GGAATAAGCCAGACCTAAGCACTGAAGGTATGAAAA...AAGAGTTAAATCTTTTCTTCCTGTTCCTAGAAGTAAAGTCACCCAGTGTTCCCA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATATCAGACTCAGACTTaGTGGAGCACATGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEYQTQT*WSTCSE
Trigger: TTCAGAGCATGTGCTCCAGCAAGTCTGAGTCTGATA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGCCTTGTATTACTGCTaGTGCTGCTTCTTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEALYYC*CCFFWC
Trigger: ACACCAAAAGAAGCAGCAGCAGCAGTAATACAAGGC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR GCA 90 bp AGATTGATCTCATACACATCAGAGACTTGCACAATCCTGGCTTCATCACTTGCTTCATCACTTGCTAGATaGATGACTTTGAGCATTTTA +
Preference number: 4 (lower is better)
Translates to: RLISYTSETCTILASSLASSLAR*MTLSIL
Trigger: TAAAATGCTCAAAGTCATGCATCTAGCAAGTGATGA...AGCAAGTGATGAAGCCAGGATTGTGCAAGTCTCTGATGTGTATGAGATCAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416239.1
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATTTCCTCTTCCAGTTTaGCCATTACGTCTTCGAGCT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEFPLPV*PLRLRA
Trigger: AGCTCGAAGACGTAATGGCCAAACTGGAAGAGGAAA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAAATTTTGTTTGCACTTaGAGGTGGGAAAGCGGGTAC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTENFVCT*RWESGY
Trigger: GTACCCGCTTTCCCACCTCCAAGTGCAAACAAAATT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAATTTCCATTTTGGTCTaGGTCGTTAGCATTGCCCTG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEISILV*VVSIAL
Trigger: CAGGGCAATGCTAACGACCCAGACCAAAATGGAAAT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CCA 90 bp AAAGATTTAACTCTTGAAACACCCAACTCAGTCTTTGATTTACTGTTGCTGCATATTTCCATTTTGGTCTaGGTCGTTAGCATTGCCCTG +
Preference number: 4 (lower is better)
Translates to: KDLTLETPNSVFDLLLLHISILV*VVSIAL
Trigger: CAGGGCAATGCTAACGACCCAGACCAAAATGGAAAT...ATGCAGCAACAGTAAATCAAAGACTGAGTTGGGTGTTTCAAGAGTTAAATCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAAATCTTGACAGTGCTTaGGTCACAGTATTCCGAGCT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTENLDSA*VTVFRA
Trigger: AGCTCGGAATACTGTGACCCAAGCACTGTCAAGATT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAATAATAACCTTGAGTTaGGGGTGTGGTGGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEIITLS*GCGGEG
Trigger: TCCTTCTCCACCACACCCCCAACTCAAGGTTATTAT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGTGTCCAGCCATCTGTaGTTTTTACACTTCGATTGG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEVSSHL*FLHFDW
Trigger: CCAATCGAAGTGTAAAAACCACAGATGGCTGGACAC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATTGCAAGCTTCCTTCTaGGCCGTGGAAAATGACATT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTELQASF*AVENDI
Trigger: AATGTCATTTTCCACGGCCCAGAAGGAAGCTTGCAA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGTGTTCTGGGAACACTaGGTGACTTTACTTCTAGGA +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEVFWEH*VTLLLG
Trigger: TCCTAGAAGTAAAGTCACCCAGTGTTCCCAGAACAC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp GGAAGAAAAGATTTAACTCTTGAAACACCCAACTCAGTCTTTGATTTACTGTTGGTGTTCTGGGAACACTaGGTGACTTTACTTCTAGGA +
Preference number: 4 (lower is better)
Translates to: GRKDLTLETPNSVFDLLLVFWEH*VTLLLG
Trigger: TCCTAGAAGTAAAGTCACCCAGTGTTCCCAGAACAC...CAACAGTAAATCAAAGACTGAGTTGGGTGTTTCAAGAGTTAAATCTTTTCTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATCGTTAGCATTGCCCTaGAATCTAAATCTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTESLALP*NLNLAA
Trigger: AGCAGCTAGATTTAGATTTCAGGGCAATGCTAACGA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACTGGGCCGTGGAAAATaGCATTATGATATTGCTCAA +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTELGRGK*HYDIAQ
Trigger: TTGAGCAATATCATAATGTCATTTTCCACGGCCCAG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAAATCAGCAATCTTGCTaGTATCAGACTCAGACTTGC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTENQQSC*YQTQTC
Trigger: GCAAGTCTGAGTCTGATATCAGCAAGATTGCTGATT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAACCCAACTCAGTCTTTaGTTTACTGTTGCTGCATTC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTETQLSL*FTVAAF
Trigger: GAATGCAGCAACAGTAAATCAAAGACTGAGTTGGGT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATTCCTCAATTTTGTTTaGACTTGGAGGTGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEFLNFV*TWRWES
Trigger: GCTTTCCCACCTCCAAGTGCAAACAAAATTGAGGAA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACATCAGAACCATAGTTaGTTGGTTCAATCTCACCCA +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEHQNHS*LVQSHP
Trigger: TGGGTGAGATTGAACCAAGCAACTATGGTTCTGATG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAAATCAGTGGTGTTATTaGAAGTCACGTCTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTENQWCY*KSRLPD
Trigger: GTCTGGAAGACGTGACTTGCAATAACACCACTGATT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACTGTTCCCACAGATATaGAAACCAAACGCCTATCTT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTELFPQI*KPNAYL
Trigger: AAGATAGGCGTTTGGTTTCCATATCTGTGGGAACAG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGATGCAAAGAGGTGTTaGCACATGGTGAATGTAAAC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEDAKRC*HMVNVN
Trigger: GTTTACATTCACCATGTGCCAACACCTCTTTGCATC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACTAAATCTAGCTGCTTaGATTCGTGGGTTTAGACCT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTELNLAA*IRGFRP
Trigger: AGGTCTAAACCCACGAATCCAAGCAGCTAGATTTAG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACTTGACGGAGGACTTTaGGTAGTATTTCCATTTTGG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTELDGGL*VVFPFW
Trigger: CCAAAATGGAAATACTACCCAAAGTCCTCCGTCAAG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACCACAGTTAAATCTATaGATGGTTTTGGTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEPQLNL*MVLVAA
Trigger: AGCTGCCACCAAAACCATCCATAGATTTAACTGTGG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACGATGTTGGAATCAGTaGTGTTATTGCAAGTCACGT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTERCWNQ*CYCKSR
Trigger: ACGTGACTTGCAATAACACCACTGATTCCAACATCG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAAGTCCATTTCCTTTTTaGAAAGTGCAGGGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTESPFPF*KVQGLS
Trigger: TGAAAGCCCCTGCACTTTCCAAAAAGGAAATGGACT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp GGAAGAAAAGATTTAACTCTTGAAACACCCAACTCAGTCTTTGATTTACTGTTGAAATCAGCTGTATGCTaGTCTAGCTTTCACTGTCAC +
Preference number: 4 (lower is better)
Translates to: GRKDLTLETPNSVFDLLLKSAVC*SSFHCH
Trigger: GTGACAGTGAAAGCTAGACCAGCATACAGCTGATTT...CAACAGTAAATCAAAGACTGAGTTGGGTGTTTCAAGAGTTAAATCTTTTCTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445366.1
3UTR CAA 72 bp CCCATGATGTCTGTTTGCGGATATTTAAAGCACATATaGTGTTTTCACATTCCAAGTCATCAGAACCATAGT +
Preference number: 4 (lower is better)
Translates to: PMMSVCGYLKHI*CFHIPSHQNHS
Trigger: ACTATGGTTCTGATGACTTGGAATGTGAAAACACAATATGTGCTTTAAATATCCGCAAACAGACATCATGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAAGTTGTTTTTCCATCTaGGCTTCCATTTCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTESCFSI*ASISVL
Trigger: AAGCACAGAAATGGAAGCTCAGATGGAAAAACAACT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACCTCCATCAGCAGCATaGTTAATGTTAGCATCATAT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEPPSAA*LMLASY
Trigger: ATATGATGCTAACATTAATCATGCTGCTGATGGAGG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATGGAAAATGACATTATaGTATTGCTCAACCAGCCTG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEWKMTL*YCSTSL
Trigger: CAGGCTGGTTGAGCAATATCATAATGTCATTTTCCA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR TCA 90 bp GGAACAGGAAGAAAAGATTTAACTCTTGAAACACCCAACTCAGTCTTTGATTTATGGAAAATGACATTATaGTATTGCTCAACCAGCCTG +
Preference number: 4 (lower is better)
Translates to: GTGRKDLTLETPNSVFDLWKMTL*YCSTSL
Trigger: CAGGCTGGTTGAGCAATATCATAATGTCATTTTCCA...TAAATCAAAGACTGAGTTGGGTGTTTCAAGAGTTAAATCTTTTCTTCCTGTTCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACACAGTGATGTGCTCTaGCTTATTCTTCCTCATAAA +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEHSDVL*LILPHK
Trigger: TTTATGAGGAAGAATAAGGCAGAGCACATCACTGTG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATTTTCATACCTTCAGTaGTTAGGTCTGGCTTATTCC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEFSYLQ*LGLAYS
Trigger: GGAATAAGCCAGACCTAAGCACTGAAGGTATGAAAA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATTGTATTACTGCTGCTaGTGCTTCTTTTGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTELYYCC*CFFWCS
Trigger: AGAACACCAAAAGAAGCAGCAGCAGCAGTAATACAA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR GCA 90 bp TGGGAACACTGGGTGACTTTACTTCTAGGAACAGGAAGAAAAGATTTAACTCTTTTGTTGATTTCTATTTaGCTTGTATTACTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: WEHWVTLLLGTGRKDLTLLLISI*LVLLLL
Trigger: CAGCAGCAGTAATACAAGGCAAATAGAAATCAACAA...AAGAGTTAAATCTTTTCTTCCTGTTCCTAGAAGTAAAGTCACCCAGTGTTCCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp GATTTTCAAGAGGTGCCAAAAAGTCCCTCAATAACTCCGACAGTGAAGATTTTTAGAATTTCCATGAGCTaGTATTCTATGGTACATAAG +
Preference number: 4 (lower is better)
Translates to: DFQEVPKSPSITPTVKIFRISMS*YSMVHK
Trigger: CTTATGTACCATAGAATACCAGCTCATGGAAATTCT...AAAAATCTTCACTGTCGGAGTTATTGAGGGACTTTTTGGCACCTCTTGAAAATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAAGACAGGAAATATTTTaGTCCAAGAAGTGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTERQEIF*SKKCFR
Trigger: CCTGAAGCACTTCTTGGACCAAAATATTTCCTGTCT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATTGAAAGAATTTCCATaGGCTGGTATTCTATGGTAC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTELKEFP*AGILWY
Trigger: GTACCATAGAATACCAGCTCATGGAAATTCTTTCAA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR TCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAAGCATGTATGCAGTATaGTTTCTGGACTTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTESMYAV*FLDFLK
Trigger: TTTAAGGAAGTCCAGAAATCATACTGCATACATGCT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATTTTTACACTTCGATTaGTTCCAGCTTCCAACAAGA +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEFLHFD*FQLPTR
Trigger: TCTTGTTGGAAGCTGGAACCAATCGAAGTGTAAAAA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAAAGAAGGCTCCTCTCTaGTACATTTTACCTTTTGTA +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEKKAPL*YILPFV
Trigger: TACAAAAGGTAAAATGTACCAGAGAGGAGCCTTCTT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000446636.5
CDS-3UTR GCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATTGTTGATTTCTATTTaGCTTGTATTACTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTELLISI*LVLLLL
Trigger: CAGCAGCAGTAATACAAGGCAAATAGAAATCAACAA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAAGAATTTCCATGAGCTaGTATTCTATGGTACATAAG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTERISMS*YSMVHK
Trigger: CTTATGTACCATAGAATACCAGCTCATGGAAATTCT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATATAACTGGAAACTATaGATAAAGGGAAACTTCCTC +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEYNWKL*IKGNFL
Trigger: GAGGAAGTTTCCCTTTATCCATAGTTTCCAGTTATA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CCA 90 bp GGAAGAAAAGATTTAACTCTTGAAACACCCAACTCAGTCTTTGATTTACTGTTGTATAACTGGAAACTATaGATAAAGGGAAACTTCCTC +
Preference number: 4 (lower is better)
Translates to: GRKDLTLETPNSVFDLLLYNWKL*IKGNFL
Trigger: GAGGAAGTTTCCCTTTATCCATAGTTTCCAGTTATA...CAACAGTAAATCAAAGACTGAGTTGGGTGTTTCAAGAGTTAAATCTTTTCTTCC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
CDS-3UTR CCA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAAACTACTTGAAAAGTTaGCATAACTTCCTGGTATTG +
Preference number: 4 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTENYLKS*HNFLVL
Trigger: CAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS TCA 90 bp GCAGGTTGGTTCAGTCCGGGGGTTGCAGCAGGCCAGGCACCCACCTaGGACGTGGCCAGGGCTGAAACGGCACAGCCTGCAGGTGCCACA +
Preference number: 5 (lower is better)
Translates to: AGWFSPGVAAGQAPT*DVARAETAQPAGAT
Trigger: TGTGGCACCTGCAGGCTGTGCCGTTTCAGCCCTGGCCACGTCTCAGGTGGGTGCCTGGCCTGCTGCAACCCCCGGACTGAACCAACCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000160373.8
CDS-3UTR CAA 90 bp GCCAGACGGACAGAGCCCAGTCGACAATCTTGCACACAGGATCGCAGGGGGAGGCCTCTGCAGCAGTCCTaGCATGGGCTCGCCATCCCA +
Preference number: 5 (lower is better)
Translates to: ARRTEPSRQSCTQDRRGRPLQQS*HGLAIP
Trigger: TGGGATGGCGAGCCCATGCAAGGACTGCTGCAGAGG...CCTCCCCCTGCGATCCTGTGTGCAAGATTGTCGACTGGGCTCTGTCCGTCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp CTCGCCATCCCACCGCAGCTGCACCCAGCGGAAATGCTGCTGCACCAGCAAGTCGTGGAAGAGAGAGGCTaGGTTTGCTGTCACTTCCCC +
Preference number: 5 (lower is better)
Translates to: LAIPPQLHPAEMLLHQQVVEERG*VCCHFP
Trigger: GGGGAAGTGACAGCAAACCAAGCCTCTCTCTTCCAC...GACTTGCTGGTGCAGCAGCATTTCCGCTGGGTGCAGCTGCGGTGGGATGGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS CCA 90 bp GAGGAGCTATGCCTGGTGTTTGAGCGGTGGGAGGGGCAGCGTTACTaGGAAGTGGGGGTGTGCTACTGGTTGGATCTGGTGTTGAGCCAG +
Preference number: 5 (lower is better)
Translates to: EELCLVFERWEGQRY*EVGVCYWLDLVLSQ
Trigger: CTGGCTCAACACCAGATCCAACCAGTAGCACACCCCCACTTCCCAGTAACGCTGCCCCTCCCACCGCTCAAACACCAGGCATAGCTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS CCA 90 bp GTGGAGCTTGCGAGTTCTGAGGAGCTATGCCTGGTGTTTGAGCGGTaGGAGGGGCAGCGTTACTGGGAAGTGGGGGTGTGCTACTGGTTG +
Preference number: 5 (lower is better)
Translates to: VELASSEELCLVFER*EGQRYWEVGVCYWL
Trigger: CAACCAGTAGCACACCCCCACTTCCCAGTAACGCTGCCCCTCCCACCGCTCAAACACCAGGCATAGCTCCTCAGAACTCGCAAGCTCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS GCA 90 bp CTACACCATGAGTCTTTAAACTGGTCCGACCAACTGGAGGGTGGGTaGCAACATCCCCTGTTGGGGGCACTCCAGGCCTTGAGGGAGCAC +
Preference number: 5 (lower is better)
Translates to: LHHESLNWSDQLEGG*QHPLLGALQALREH
Trigger: GTGCTCCCTCAAGGCCTGGAGTGCCCCCAACAGGGGATGTTGGCACCCACCCTCCAGTTGGTCGGACCAGTTTAAAGACTCATGGTGTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp GCCAGACGGACAGAGCCCAGTCGACAATCTTGCACACAGGATCGCAGGGGGAGGTGGTTGGATCTGGTGTaGAGCCAGTGCTTGGTCCAT +
Preference number: 5 (lower is better)
Translates to: ARRTEPSRQSCTQDRRGRWLDLV*SQCLVH
Trigger: ATGGACCAAGCACTGGCTCAACACCAGATCCAACCA...CCTCCCCCTGCGATCCTGTGTGCAAGATTGTCGACTGGGCTCTGTCCGTCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS GCA 90 bp TTGCCTGAGAGCTGCTTGCACTCTTTGACCAGCATCAGGACCACCTaGTTGTTCTTGCCACGCTCTTCCTCAAGGCGGGCAGCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: LPESCLHSLTSIRTT*LFLPRSSSRRAASF
Trigger: GAAGCTGGCTGCCCGCCTTGAGGAAGAGCGTGGCAAGAACAAGCAGGTGGTCCTGATGCTGGTCAAAGAGTGCAAGCAGCTCTCAGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000160373.8
ENST00000434890.5
ENST00000441556.5
ENST00000487820.1
CDS-3UTR CAA 90 bp GCCAGACGGACAGAGCCCAGTCGACAATCTTGCACACAGGATCGCAGGGGGAGGGCACTGAGGCCGATGTaGGAATCAGTGGTGTTATTG +
Preference number: 5 (lower is better)
Translates to: ARRTEPSRQSCTQDRRGRALRPM*ESVVLL
Trigger: CAATAACACCACTGATTCCAACATCGGCCTCAGTGC...CCTCCCCCTGCGATCCTGTGTGCAAGATTGTCGACTGGGCTCTGTCCGTCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS GCA 90 bp AGGAAGCCTGCCTGTCAATACCTGGTCTGGCCATGGTGGCACTGGTaGACACGCTCCCTTTTGCATTTGCAGAAACTAGGGGACTCCCTG +
Preference number: 5 (lower is better)
Translates to: RKPACQYLVWPWWHW*TRSLLHLQKLGDSL
Trigger: CAGGGAGTCCCCTAGTTTCTGCAAATGCAAAAGGGAGCGTGTGCACCAGTGCCACCATGGCCAGACCAGGTATTGACAGGCAGGCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS GCA 90 bp GTGTTTGAGCGGTGGGAGGGGCAGCGTTACTGGGAAGTGGGGGTGTaGTACTGGTTGGATCTGGTGTTGAGCCAGTGCTTGGTCCATTTT +
Preference number: 5 (lower is better)
Translates to: VFERWEGQRYWEVGV*YWLDLVLSQCLVHF
Trigger: AAAATGGACCAAGCACTGGCTCAACACCAGATCCAACCAGTAGCACACCCCCACTTCCCAGTAACGCTGCCCCTCCCACCGCTCAAACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CAA 90 bp GCCAGACGGACAGAGCCCAGTCGACAATCTTGCACACAGGATCGCAGGGGGAGGCTGTCTATAATAACCTaGAGTTGGGGGTGTGGTGGA +
Preference number: 5 (lower is better)
Translates to: ARRTEPSRQSCTQDRRGRLSIIT*SWGCGG
Trigger: TCCACCACACCCCCAACTCAAGGTTATTATAGACAG...CCTCCCCCTGCGATCCTGTGTGCAAGATTGTCGACTGGGCTCTGTCCGTCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS CCA 90 bp CATAGGAAGCCTGCCTGTCAATACCTGGTCTGGCCATGGTGGCACTaGTGCACACGCTCCCTTTTGCATTTGCAGAAACTAGGGGACTCC +
Preference number: 5 (lower is better)
Translates to: HRKPACQYLVWPWWH*CTRSLLHLQKLGDS
Trigger: GGAGTCCCCTAGTTTCTGCAAATGCAAAAGGGAGCGTGTGCACCAGTGCCACCATGGCCAGACCAGGTATTGACAGGCAGGCTTCCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS CCA 90 bp CGCCAATCAAGTCACCATAGGAAGCCTGCCTGTCAATACCTGGTCTaGCCATGGTGGCACTGGTGCACACGCTCCCTTTTGCATTTGCAG +
Preference number: 5 (lower is better)
Translates to: RQSSHHRKPACQYLV*PWWHWCTRSLLHLQ
Trigger: CTGCAAATGCAAAAGGGAGCGTGTGCACCAGTGCCACCATGGCCAGACCAGGTATTGACAGGCAGGCTTCCTATGGTGACTTGATTGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CAA 90 bp CTCGCCATCCCACCGCAGCTGCACCCAGCGGAAATGCTGCTGCACCAGCAAGTCGTCAAACTCAGAGAGTaGTTTTTCCATCTGAGCTTC +
Preference number: 5 (lower is better)
Translates to: LAIPPQLHPAEMLLHQQVVKLRE*FFHLSF
Trigger: GAAGCTCAGATGGAAAAACAACTCTCTGAGTTTGAC...GACTTGCTGGTGCAGCAGCATTTCCGCTGGGTGCAGCTGCGGTGGGATGGCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp TCTGGGTGCGATGACGCCATTCCACAGCTTAGACATCCACTTCACTGTCACTTGTCTTCCCGGTTCAGCTaGGCACGAAGCTGTTCCCGC +
Preference number: 5 (lower is better)
Translates to: SGCDDAIPQLRHPLHCHLSSRFS*ARSCSR
Trigger: GCGGGAACAGCTTCGTGCCAAGCTGAACCGGGAAGA...CAAGTGACAGTGAAGTGGATGTCTAAGCTGTGGAATGGCGTCATCGCACCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp GCAAGTCGGAGCCCTGGAGACAGGCCTTGGCGATGGTTCCCATCAGAAAGCAGTGTTTTGTTATCAACTTaGGCCCCTGTGTTCGAGGCC +
Preference number: 5 (lower is better)
Translates to: ASRSPGDRPWRWFPSESSVLLST*APVFEA
Trigger: GGCCTCGAACACAGGGGCCAAAGTTGATAACAAAAC...ACTGCTTTCTGATGGGAACCATCGCCAAGGCCTGTCTCCAGGGCTCCGACTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp GCCAGACTTCCTGCGAGGACTGGTGTTCACCTTTCTCCAGGCACCACTCTCTCCGCTGCATTCAGTAGTTaGATGGCTGCTGAGAGGACT +
Preference number: 5 (lower is better)
Translates to: ARLPARTGVHLSPGTTLSAAFSS*MAAERT
Trigger: AGTCCTCTCAGCAGCCATCAAACTACTGAATGCAGC...GGAGAGAGTGGTGCCTGGAGAAAGGTGAACACCAGTCCTCGCAGGAAGTCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
CDS TCA 90 bp GGCCATTACGTCTTCGAGCTTCTGGGCCTCCTCTATGACTTTGCCTaGGAGCTGCTTGCACTCTTTGACCAGCATCAGGACCACCTGCTT +
Preference number: 5 (lower is better)
Translates to: GHYVFELLGLLYDFA*ELLALFDQHQDHLL
Trigger: AAGCAGGTGGTCCTGATGCTGGTCAAAGAGTGCAAGCAGCTCTCAGGCAAAGTCATAGAGGAGGCCCAGAAGCTCGAAGACGTAATGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000160373.8
ENST00000434890.5
ENST00000441556.5
ENST00000487820.1
CDS CCA 90 bp AGTCACCATAGGAAGCCTGCCTGTCAATACCTGGTCTGGCCATGGTaGCACTGGTGCACACGCTCCCTTTTGCATTTGCAGAAACTAGGG +
Preference number: 5 (lower is better)
Translates to: SHHRKPACQYLVWPW*HWCTRSLLHLQKLG
Trigger: CCCTAGTTTCTGCAAATGCAAAAGGGAGCGTGTGCACCAGTGCCACCATGGCCAGACCAGGTATTGACAGGCAGGCTTCCTATGGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS CCA 90 bp AGAAGCGCCAATCAAGTCACCATAGGAAGCCTGCCTGTCAATACCTaGTCTGGCCATGGTGGCACTGGTGCACACGCTCCCTTTTGCATT +
Preference number: 5 (lower is better)
Translates to: RSANQVTIGSLPVNT*SGHGGTGAHAPFCI
Trigger: AATGCAAAAGGGAGCGTGTGCACCAGTGCCACCATGGCCAGACCAGGTATTGACAGGCAGGCTTCCTATGGTGACTTGATTGGCGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS CCA 90 bp GAGGATTTCCTCTGTCAACTCGTGCTACACCATGAGTCTTTAAACTaGTCCGACCAACTGGAGGGTGGGTGCCAACATCCCCTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: EDFLCQLVLHHESLN*SDQLEGGCQHPLLG
Trigger: CCCCAACAGGGGATGTTGGCACCCACCCTCCAGTTGGTCGGACCAGTTTAAAGACTCATGGTGTAGCACGAGTTGACAGAGGAAATCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp ACAACAGGCTTGGATATGCCTTCAGGACTCTCTTCTCCTCCATCCAAGTCAAAGAGCTATGCCTGGTGTTaGAGCGGTGGGAGGGGCAGC +
Preference number: 5 (lower is better)
Translates to: TTGLDMPSGLSSPPSKSKSYAWC*SGGRGS
Trigger: GCTGCCCCTCCCACCGCTCAAACACCAGGCATAGCT...CTTTGACTTGGATGGAGGAGAAGAGAGTCCTGAAGGCATATCCAAGCCTGTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp GATCGTATGCTTCTTGCACTGAGGCCGATGTTGGAATCAGTGGTGTTATTGCAAGGGGCACTCCAGGCCTaGAGGGAGCACCTGCTTGAG +
Preference number: 5 (lower is better)
Translates to: DRMLLALRPMLESVVLLQGALQA*REHLLE
Trigger: CTCAAGCAGGTGCTCCCTCAAGGCCTGGAGTGCCCC...TTGCAATAACACCACTGATTCCAACATCGGCCTCAGTGCAAGAAGCATACGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp AGGCAGTTCTTAAAACCTTTGGAAGCAGCAATGTGGGCAGCAGTCCAGCCTTCTCCCTGGAGACAGGCCTaGGCGATGGTTCCCATCAGA +
Preference number: 5 (lower is better)
Translates to: RQFLKPLEAAMWAAVQPSPWRQA*AMVPIR
Trigger: TCTGATGGGAACCATCGCCAAGGCCTGTCTCCAGGG...AGAAGGCTGGACTGCTGCCCACATTGCTGCTTCCAAAGGTTTTAAGAACTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp AGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTGCGAGGAAGCTTTCACTGTCACTaGGGCATGCCCAGGAACTAC +
Preference number: 5 (lower is better)
Translates to: RSGLFQVGKEKRPDFLRGSFHCH*GMPRNY
Trigger: GTAGTTCCTGGGCATGCCCAAGTGACAGTGAAAGCT...TCCTCGCAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAATAAGCCAGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445366.1
CDS TCA 90 bp GGAGGGATAGGAGGAGGATTTCCTCTGTCAACTCGTGCTACACCATaGGTCTTTAAACTGGTCCGACCAACTGGAGGGTGGGTGCCAACA +
Preference number: 5 (lower is better)
Translates to: GGIGGGFPLSTRATP*VFKLVRPTGGWVPT
Trigger: TGTTGGCACCCACCCTCCAGTTGGTCGGACCAGTTTAAAGACTCATGGTGTAGCACGAGTTGACAGAGGAAATCCTCCTCCTATCCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS GCA 90 bp ACGTCTTCGAGCTTCTGGGCCTCCTCTATGACTTTGCCTGAGAGCTaGTTGCACTCTTTGACCAGCATCAGGACCACCTGCTTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: TSSSFWASSMTLPES*LHSLTSIRTTCLFL
Trigger: CAAGAACAAGCAGGTGGTCCTGATGCTGGTCAAAGAGTGCAAGCAGCTCTCAGGCAAAGTCATAGAGGAGGCCCAGAAGCTCGAAGACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000160373.8
ENST00000434890.5
ENST00000441556.5
ENST00000487820.1
CDS-3UTR CAA 90 bp CTGGAGAGGGATCATGGAGGCATAAGTCACACTACTGAGACAGCCTTCTTGAGGATCAGGACCACCTGCTaGTTCTTGCCACGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: LERDHGGISHTTETAFLRIRTTC*FLPRSS
Trigger: GGAAGAGCGTGGCAAGAACAAGCAGGTGGTCCTGAT...CCTCAAGAAGGCTGTCTCAGTAGTGTGACTTATGCCTCCATGATCCCTCTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp GATTGCACTTGTCTCTCCTTTCTGGCTCAAGCCCTCCGTGCCTACACAAGATTTGGGGTGTGCTACTGGTaGGATCTGGTGTTGAGCCAG +
Preference number: 5 (lower is better)
Translates to: DCTCLSFLAQALRAYTRFGVCYW*DLVLSQ
Trigger: CTGGCTCAACACCAGATCCAACCAGTAGCACACCCC...AAATCTTGTGTAGGCACGGAGGGCTTGAGCCAGAAAGGAGAGACAAGTGCAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp CTTAGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTGCGAGATCACCCTGTTCCCTaGTGGCAAACTGGAAGGAGT +
Preference number: 5 (lower is better)
Translates to: LRSGLFQVGKEKRPDFLRDHPVP*WQTGRS
Trigger: ACTCCTTCCAGTTTGCCACAAGGGAACAGGGTGATC...TCGCAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAATAAGCCAGACCTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp AGAGCAGCTTTGACCACAGCCTGCTGTCCTTGGCTAGGGTGTCTTTTAGCAGTTCCACTTCACTGTCACTaGGGCATGCCCAGGAACTAC +
Preference number: 5 (lower is better)
Translates to: RAALTTACCPWLGCLLAVPLHCH*GMPRNY
Trigger: GTAGTTCCTGGGCATGCCCAAGTGACAGTGAAGTGG...AACTGCTAAAAGACACCCTAGCCAAGGACAGCAGGCTGTGGTCAAAGCTGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS TCA 90 bp CCAGCTGTGCGGACATCCTTTCTTGCATTTTCTTGCAGTGGGCCATaGCTGCTTCAAGGATGGAGAGGGGGTTGGTACAAACTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: PAVRTSFLAFSCSGP*LLQGWRGGWYKLAS
Trigger: AGAAGCCAGTTTGTACCAACCCCCTCTCCATCCTTGAAGCAGTCATGGCCCACTGCAAGAAAATGCAAGAAAGGATGTCCGCACAGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000160373.8
ENST00000412853.1
ENST00000434890.5
ENST00000441556.5
ENST00000454375.5
CDS CCA 90 bp AGTGCCAGGAACGGGTCATTTAGATTAAATCTCCCATACCGTTCCTaGATAAATACCTCCTTCCTGCGAGCCCGCAGGGCCTCGATGACA +
Preference number: 5 (lower is better)
Translates to: SARNGSFRLNLPYRS*INTSFLRARRASMT
Trigger: TGTCATCGAGGCCCTGCGGGCTCGCAGGAAGGAGGTATTTATCCAGGAACGGTATGGGAGATTTAATCTAAATGACCCGTTCCTGGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000160373.8
ENST00000412853.1
ENST00000434890.5
ENST00000441556.5
ENST00000454375.5
CDS CCA 90 bp TCAAGTCACCATAGGAAGCCTGCCTGTCAATACCTGGTCTGGCCATaGTGGCACTGGTGCACACGCTCCCTTTTGCATTTGCAGAAACTA +
Preference number: 5 (lower is better)
Translates to: SSHHRKPACQYLVWP*WHWCTRSLLHLQKL
Trigger: TAGTTTCTGCAAATGCAAAAGGGAGCGTGTGCACCAGTGCCACCATGGCCAGACCAGGTATTGACAGGCAGGCTTCCTATGGTGACTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CAA 90 bp TGGGTAAAGAGAAGCGGCCAGACTTCCTGCGAGGACTGGTGTTCACCTTTCTCCCAATTTTGTTTGCACTaGGAGGTGGGAAAGCGGGTA +
Preference number: 5 (lower is better)
Translates to: WVKRSGQTSCEDWCSPFSQFCLH*EVGKRV
Trigger: TACCCGCTTTCCCACCTCCAAGTGCAAACAAAATTG...GGAGAAAGGTGAACACCAGTCCTCGCAGGAAGTCTGGCCGCTTCTCTTTACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp TTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTGCGAGGACTGGTGTTCACCTTTTTATCAGCAGCATaGACTTGGGCTTCTGCACTC +
Preference number: 5 (lower is better)
Translates to: FQVGKEKRPDFLRGLVFTFLSAA*TWASAL
Trigger: GAGTGCAGAAGCCCAAGTCAATGCTGCTGATAAAAA...GGTGAACACCAGTCCTCGCAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp CTTAGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTGCGACCAAGTCAAAGACACTaGACTCGGACTCCTCCTCAT +
Preference number: 5 (lower is better)
Translates to: LRSGLFQVGKEKRPDFLRPSQRH*TRTPPH
Trigger: ATGAGGAGGAGTCCGAGTCAAGTGTCTTTGACTTGG...TCGCAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAATAAGCCAGACCTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp AGAAGCGGCCAGACTTCCTGCGAGGACTGGTGTTCACCTTTCTCCAGGCACCACCACCCAACTCAGTCTTaGATTTACTGTTGCTGCATT +
Preference number: 5 (lower is better)
Translates to: RSGQTSCEDWCSPFSRHHHPTQS*IYCCCI
Trigger: AATGCAGCAACAGTAAATCAAAGACTGAGTTGGGTG...GTGGTGCCTGGAGAAAGGTGAACACCAGTCCTCGCAGGAAGTCTGGCCGCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
CDS TCA 90 bp CCTGCAGGTGCCACAGTTAAATCTATGGATGGTTTTGGTGGCAGCTaGGGGGAGGATGACTTAGGAAGGTTCTCCTCATTGATCACCCTG +
Preference number: 5 (lower is better)
Translates to: PAGATVKSMDGFGGS*GEDDLGRFSSLITL
Trigger: CAGGGTGATCAATGAGGAGAACCTTCCTAAGTCATCCTCCCCTCAGCTGCCACCAAAACCATCCATAGATTTAACTGTGGCACCTGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS GCA 90 bp CTGTGCGGACATCCTTTCTTGCATTTTCTTGCAGTGGGCCATGACTaGTTCAAGGATGGAGAGGGGGTTGGTACAAACTGGCTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: LCGHPFLHFLAVGHD*FKDGEGVGTNWLLL
Trigger: GAGAAGAAGCCAGTTTGTACCAACCCCCTCTCCATCCTTGAAGCAGTCATGGCCCACTGCAAGAAAATGCAAGAAAGGATGTCCGCACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000160373.8
ENST00000412853.1
ENST00000434890.5
ENST00000441556.5
ENST00000454375.5
CDS-3UTR CAA 90 bp TCTGGGTGCGATGACGCCATTCCACAGCTTAGACATCCACTTCACTGTCACTTGTGCGGACATCCTTTCTaGCATTTTCTTGCAGTGGGC +
Preference number: 5 (lower is better)
Translates to: SGCDDAIPQLRHPLHCHLCGHPF*HFLAVG
Trigger: GCCCACTGCAAGAAAATGCAAGAAAGGATGTCCGCA...CAAGTGACAGTGAAGTGGATGTCTAAGCTGTGGAATGGCGTCATCGCACCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp TCTGGGTGCGATGACGCCATTCCACAGCTTAGACATCCACTTCACTGTCACTTGGGCATGCAACAGACCTaGTCACAGTTCCTTCTGTTC +
Preference number: 5 (lower is better)
Translates to: SGCDDAIPQLRHPLHCHLGMQQT*SQFLLF
Trigger: GAACAGAAGGAACTGTGACAAGGTCTGTTGCATGCC...CAAGTGACAGTGAAGTGGATGTCTAAGCTGTGGAATGGCGTCATCGCACCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp AGGCAGTTCTTAAAACCTTTGGAAGCAGCAATGTGGGCAGCAGTCCAGCCTTCTCGCTCCCTTTTGCATTaGCAGAAACTAGGGGACTCC +
Preference number: 5 (lower is better)
Translates to: RQFLKPLEAAMWAAVQPSRSLLH*QKLGDS
Trigger: GGAGTCCCCTAGTTTCTGCAAATGCAAAAGGGAGCG...AGAAGGCTGGACTGCTGCCCACATTGCTGCTTCCAAAGGTTTTAAGAACTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp GATTGCACTTGTCTCTCCTTTCTGGCTCAAGCCCTCCGTGCCTACACAAGATTTTGTTTGGCCACTAGGTaGTCACGACTTGTAGGCGAG +
Preference number: 5 (lower is better)
Translates to: DCTCLSFLAQALRAYTRFCLATR*SRLVGE
Trigger: CTCGCCTACAAGTCGTGACAACCTAGTGGCCAAACA...AAATCTTGTGTAGGCACGGAGGGCTTGAGCCAGAAAGGAGAGACAAGTGCAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp TTGGAAAAACCAGCATCTACTTCAGCTCTCACTATTTCACAGGAGAATCCTGCATGCCAACATCCCCTGTaGGGGGCACTCCAGGCCTTG +
Preference number: 5 (lower is better)
Translates to: LEKPASTSALTISQENPACQHPL*GALQAL
Trigger: CAAGGCCTGGAGTGCCCCCAACAGGGGATGTTGGCA...TGCAGGATTCTCCTGTGAAATAGTGAGAGCTGAAGTAGATGCTGGTTTTTCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp AGAAGCGGCCAGACTTCCTGCGAGGACTGGTGTTCACCTTTCTCCAGGCACCACTCCCATGATGTCTGTTaGCGGATATTTAAAGCACAT +
Preference number: 5 (lower is better)
Translates to: RSGQTSCEDWCSPFSRHHSHDVC*RIFKAH
Trigger: ATGTGCTTTAAATATCCGCAAACAGACATCATGGGA...GTGGTGCCTGGAGAAAGGTGAACACCAGTCCTCGCAGGAAGTCTGGCCGCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp GCAAGTCGGAGCCCTGGAGACAGGCCTTGGCGATGGTTCCCATCAGAAAGCAGTATCCATCAGAAGAGATaGCCTGGAAATGATTTGTCA +
Preference number: 5 (lower is better)
Translates to: ASRSPGDRPWRWFPSESSIHQKR*PGNDLS
Trigger: TGACAAATCATTTCCAGGCAATCTCTTCTGATGGAT...ACTGCTTTCTGATGGGAACCATCGCCAAGGCCTGTCTCCAGGGCTCCGACTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp GATTGCACTTGTCTCTCCTTTCTGGCTCAAGCCCTCCGTGCCTACACAAGATTTCTGCCCAAAGCCAGGTaGTCTTTTCACAGAGGCTCT +
Preference number: 5 (lower is better)
Translates to: DCTCLSFLAQALRAYTRFLPKAR*SFHRGS
Trigger: AGAGCCTCTGTGAAAAGACAACCTGGCTTTGGGCAG...AAATCTTGTGTAGGCACGGAGGGCTTGAGCCAGAAAGGAGAGACAAGTGCAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp AGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTGCGAGGACTGGAATCAGCAATCTaGCTGATATCAGACTCAGAC +
Preference number: 5 (lower is better)
Translates to: RSGLFQVGKEKRPDFLRGLESAI*LISDSD
Trigger: GTCTGAGTCTGATATCAGCAAGATTGCTGATTCCAG...TCCTCGCAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAATAAGCCAGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
CDS CCA 90 bp GCCAGTGCTTGGTCCATTTTCCTCAATTTTGTTTGCACTTGGAGGTaGGAAAGCGGGTACAGAAGCGCCAATCAAGTCACCATAGGAAGC +
Preference number: 5 (lower is better)
Translates to: ASAWSIFLNFVCTWR*ESGYRSANQVTIGS
Trigger: GCTTCCTATGGTGACTTGATTGGCGCTTCTGTACCCGCTTTCCCACCTCCAAGTGCAAACAAAATTGAGGAAAATGGACCAAGCACTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CAA 90 bp AGGCAGTTCTTAAAACCTTTGGAAGCAGCAATGTGGGCAGCAGTCCAGCCTTCTCATTTCCAGCTTCTTTaGTCTGCTCTCAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: RQFLKPLEAAMWAAVQPSHFQLL*SALSSS
Trigger: GCTGCTGCTGAGAGCAGACAAAAGAAGCTGGAAATG...AGAAGGCTGGACTGCTGCCCACATTGCTGCTTCCAAAGGTTTTAAGAACTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp TTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTGCGAGGACTGGTGTTCACCATCATTTTCCTCATCTaGTCTATCTCCTCTTTGAGG +
Preference number: 5 (lower is better)
Translates to: FQVGKEKRPDFLRGLVFTIIFLI*SISSLR
Trigger: CCTCAAAGAGGAGATAGACAAGATGAGGAAAATGAT...GGTGAACACCAGTCCTCGCAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp AGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTGCGAGGATTTCCTCAATTTTGTTaGCACTTGGAGGTGGGAAAG +
Preference number: 5 (lower is better)
Translates to: RSGLFQVGKEKRPDFLRGFPQFC*HLEVGK
Trigger: CTTTCCCACCTCCAAGTGCAAACAAAATTGAGGAAA...TCCTCGCAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAATAAGCCAGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp ACAACAGGCTTGGATATGCCTTCAGGACTCTCTTCTCCTCCATCCAAGTCAAAGGTGCATAGGTGGAGCTaGCGAGTTCTGAGGAGCTAT +
Preference number: 5 (lower is better)
Translates to: TTGLDMPSGLSSPPSKSKVHRWS*RVLRSY
Trigger: ATAGCTCCTCAGAACTCGCAAGCTCCACCTATGCAC...CTTTGACTTGGATGGAGGAGAAGAGAGTCCTGAAGGCATATCCAAGCCTGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp AAGGGTATTTTAAGAGCATTCAGATTCTCCAGCAAATGCTTGCAGTCATCAGTGTCCCTGGGCAGCAGCTaGCTGAAGAAGGGTGGGCCT +
Preference number: 5 (lower is better)
Translates to: KGILRAFRFSSKCLQSSVSLGSS*LKKGGP
Trigger: AGGCCCACCCTTCTTCAGCAAGCTGCTGCCCAGGGA...CACTGATGACTGCAAGCATTTGCTGGAGAATCTGAATGCTCTTAAAATACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp TATTGCAAGTCACGTCTTCCAGACTCCACCATCCATCAGAAGAGATTGCCTGGAGCAGGAACAACAGGCTaGGATATGCCTTCAGGACTC +
Preference number: 5 (lower is better)
Translates to: YCKSRLPDSTIHQKRLPGAGTTG*DMPSGL
Trigger: GAGTCCTGAAGGCATATCCAAGCCTGTTGTTCCTGC...TCCAGGCAATCTCTTCTGATGGATGGTGGAGTCTGGAAGACGTGACTTGCAATA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp GTGCTTAGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTGCAGTTCTTAAAACCTTaGGAAGCAGCAATGTGGGCA +
Preference number: 5 (lower is better)
Translates to: VLRSGLFQVGKEKRPDFLQFLKP*EAAMWA
Trigger: TGCCCACATTGCTGCTTCCAAAGGTTTTAAGAACTG...CAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAATAAGCCAGACCTAAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp CCTGACAAAAGCACAGTGATGTGCTCTGCCTTATTCTTCCTCATAAAGTCCCACCACAGCCTGCTGTCCTaGGCTAGGGTGTCTTTTAGC +
Preference number: 5 (lower is better)
Translates to: PDKSTVMCSALFFLIKSHHSLLS*ARVSFS
Trigger: GCTAAAAGACACCCTAGCCAAGGACAGCAGGCTGTG...GTGGGACTTTATGAGGAAGAATAAGGCAGAGCACATCACTGTGCTTTTGTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp AGGCAGTTCTTAAAACCTTTGGAAGCAGCAATGTGGGCAGCAGTCCAGCCTTCTTTTTCCTCTTCCAGTTaGGCCATTACGTCTTCGAGC +
Preference number: 5 (lower is better)
Translates to: RQFLKPLEAAMWAAVQPSFSSSS*AITSSS
Trigger: GCTCGAAGACGTAATGGCCAAACTGGAAGAGGAAAA...AGAAGGCTGGACTGCTGCCCACATTGCTGCTTCCAAAGGTTTTAAGAACTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp CTTAGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGCGGCCAGACTTCCTGCGAGGTAGTATTTCCATTTaGGTCTGGGTCGTTAGCATT +
Preference number: 5 (lower is better)
Translates to: LRSGLFQVGKEKRPDFLRGSISI*VWVVSI
Trigger: AATGCTAACGACCCAGACCAAAATGGAAATACTACC...TCGCAGGAAGTCTGGCCGCTTCTCTTTACCCACCTGGAATAAGCCAGACCTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS TCA 90 bp GACTTTGAGCATTTTACCTCTCTCTGTTCAGTTTCCCCATCAGCCTaGGGTAGTTCTGCATCATCTGGAGAGGGATCATGGAGGCATAAG +
Preference number: 5 (lower is better)
Translates to: DFEHFTSLCSVSPSA*GSSASSGEGSWRHK
Trigger: CTTATGCCTCCATGATCCCTCTCCAGATGATGCAGAACTACCTCAGGCTGATGGGGAAACTGAACAGAGAGAGGTAAAATGCTCAAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416239.1
ENST00000482124.1
CDS-3UTR CAA 90 bp CTTTCAGTGCTGCGATTTTCAAGAGGTGCCAAAAAGTCCCTCAATAACTCCGACAGAGAGAGGCTTGGTTaGCTGTCACTTCCCCTTTTC +
Preference number: 5 (lower is better)
Translates to: LSVLRFSRGAKKSLNNSDRERLG*LSLPLF
Trigger: GAAAAGGGGAAGTGACAGCAAACCAAGCCTCTCTCT...GTCGGAGTTATTGAGGGACTTTTTGGCACCTCTTGAAAATCGCAGCACTGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGGGGCACTCCAGGCCTaGAGGGAGCACCTGCTTGAG +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEGALQA*REHLLE
Trigger: CTCAAGCAGGTGCTCCCTCAAGGCCTGGAGTGCCCC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp CTTTATTTCCATTTTTACAGGCCAGGTATAGAGGTGTCTGTCCTCCATCAGCAGATCAGCAGCATTGACTaGGGCTTCTGCACTCAGCAG +
Preference number: 5 (lower is better)
Translates to: LYFHFYRPGIEVSVLHQQISSID*GFCTQQ
Trigger: CTGCTGAGTGCAGAAGCCCAAGTCAATGCTGCTGAT...CTGCTGATGGAGGACAGACACCTCTATACCTGGCCTGTAAAAATGGAAATAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp CTGGAGAGGGATCATGGAGGCATAAGTCACACTACTGAGACAGCCTTCTTGAGGGTTTTTACACTTCGATaGGTTCCAGCTTCCAACAAG +
Preference number: 5 (lower is better)
Translates to: LERDHGGISHTTETAFLRVFTLR*VPASNK
Trigger: CTTGTTGGAAGCTGGAACCAATCGAAGTGTAAAAAC...CCTCAAGAAGGCTGTCTCAGTAGTGTGACTTATGCCTCCATGATCCCTCTCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp GATCGTATGCTTCTTGCACTGAGGCCGATGTTGGAATCAGTGGTGTTATTGCAAACAGTCCGATTGCACTaGTCTCTCCTTTCTGGCTCA +
Preference number: 5 (lower is better)
Translates to: DRMLLALRPMLESVVLLQTVRLH*SLLSGS
Trigger: TGAGCCAGAAAGGAGAGACAAGTGCAATCGGACTGT...TTGCAATAACACCACTGATTCCAACATCGGCCTCAGTGCAAGAAGCATACGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp TCAGAGACTTGCACAATCCTGGCTTCATCACTTGCTAGATGCATGACTTTGAGCGCACTGAGGCCGATGTaGGAATCAGTGGTGTTATTG +
Preference number: 5 (lower is better)
Translates to: SETCTILASSLARCMTLSALRPM*ESVVLL
Trigger: CAATAACACCACTGATTCCAACATCGGCCTCAGTGC...GCTCAAAGTCATGCATCTAGCAAGTGATGAAGCCAGGATTGTGCAAGTCTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416239.1
CDS-3UTR CAA 90 bp CTAATGAACAGGTCTAGTAGCTGTTCCTTGGAAAAACCAGCATCTACTTCAGCTAGGATGGAGAGGGGGTaGGTACAAACTGGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: LMNRSSSCSLEKPASTSARMERG*VQTGFF
Trigger: GAAGAAGCCAGTTTGTACCAACCCCCTCTCCATCCT...AGCTGAAGTAGATGCTGGTTTTTCCAAGGAACAGCTACTAGACCTGTTCATTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp AAGGGTATTTTAAGAGCATTCAGATTCTCCAGCAAATGCTTGCAGTCATCAGTGGCCTCCTCTATGACTTaGCCTGAGAGCTGCTTGCAC +
Preference number: 5 (lower is better)
Translates to: KGILRAFRFSSKCLQSSVASSMT*PESCLH
Trigger: GTGCAAGCAGCTCTCAGGCAAAGTCATAGAGGAGGC...CACTGATGACTGCAAGCATTTGCTGGAGAATCTGAATGCTCTTAAAATACCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAAGCTATGCCTGGTGTTaGAGCGGTGGGAGGGGCAGC +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTESYAWC*SGGRGS
Trigger: GCTGCCCCTCCCACCGCTCAAACACCAGGCATAGCT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATGCCAACATCCCCTGTaGGGGGCACTCCAGGCCTTG +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTECQHPL*GALQAL
Trigger: CAAGGCCTGGAGTGCCCCCAACAGGGGATGTTGGCA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATCCCTGGGCAGCAGCTaGCTGAAGAAGGGTGGGCCT +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTESLGSS*LKKGGP
Trigger: AGGCCCACCCTTCTTCAGCAAGCTGCTGCCCAGGGA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp TTTTTCATACCTTCAGTGCTTAGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGGTCCAGCCTTCTCTGTaGGCGTGGTTAATGAGGTCT +
Preference number: 5 (lower is better)
Translates to: FFIPSVLRSGLFQVGKEKVQPSL*AWLMRS
Trigger: AGACCTCATTAACCACGCCAACAGAGAAGGCTGGAC...CTTCTCTTTACCCACCTGGAATAAGCCAGACCTAAGCACTGAAGGTATGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp AGGCAGTTCTTAAAACCTTTGGAAGCAGCAATGTGGGCAGCAGTCCAGCCTTCTTCTAGTAGCTGTTCCTaGGAAAAACCAGCATCTACT +
Preference number: 5 (lower is better)
Translates to: RQFLKPLEAAMWAAVQPSSSSCS*EKPAST
Trigger: AGTAGATGCTGGTTTTTCCAAGGAACAGCTACTAGA...AGAAGGCTGGACTGCTGCCCACATTGCTGCTTCCAAAGGTTTTAAGAACTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACCTCTGCAGCAGTCCTaGCATGGGCTCGCCATCCCA +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEPLQQS*HGLAIP
Trigger: TGGGATGGCGAGCCCATGCAAGGACTGCTGCAGAGG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACGGGCAGCCAGCTTCTaGTGCTCTTGCTCAAGGGCT +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTERAASF*CSCSRA
Trigger: AGCCCTTGAGCAAGAGCACAAGAAGCTGGCTGCCCG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CAA 90 bp AAAGATTTAACTCTTGAAACACCCAACTCAGTCTTTGATTTACTGTTGCTGCATCGGGCAGCCAGCTTCTaGTGCTCTTGCTCAAGGGCT +
Preference number: 5 (lower is better)
Translates to: KDLTLETPNSVFDLLLLHRAASF*CSCSRA
Trigger: AGCCCTTGAGCAAGAGCACAAGAAGCTGGCTGCCCG...ATGCAGCAACAGTAAATCAAAGACTGAGTTGGGTGTTTCAAGAGTTAAATCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp TGGGAACACTGGGTGACTTTACTTCTAGGAACAGGAAGAAAAGATTTAACTCTTACCACCTGCTTGTTCTaGCCACGCTCTTCCTCAAGG +
Preference number: 5 (lower is better)
Translates to: WEHWVTLLLGTGRKDLTLTTCLF*PRSSSR
Trigger: CCTTGAGGAAGAGCGTGGCAAGAACAAGCAGGTGGT...AAGAGTTAAATCTTTTCTTCCTGTTCCTAGAAGTAAAGTCACCCAGTGTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATCTTCCCGGTTCAGCTaGGCACGAAGCTGTTCCCGC +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTESSRFS*ARSCSR
Trigger: GCGGGAACAGCTTCGTGCCAAGCTGAACCGGGAAGA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CAA 90 bp CCTGACAAAAGCACAGTGATGTGCTCTGCCTTATTCTTCCTCATAAAGTCCCACGTGTTGAGCCAGTGCTaGGTCCATTTTCCTCAATTT +
Preference number: 5 (lower is better)
Translates to: PDKSTVMCSALFFLIKSHVLSQC*VHFPQF
Trigger: AAATTGAGGAAAATGGACCAAGCACTGGCTCAACAC...GTGGGACTTTATGAGGAAGAATAAGGCAGAGCACATCACTGTGCTTTTGTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp TTGGAAAAACCAGCATCTACTTCAGCTCTCACTATTTCACAGGAGAATCCTGCATTCCGAGCTAGTTGTTaGGCCACTAGGTTGTCACGA +
Preference number: 5 (lower is better)
Translates to: LEKPASTSALTISQENPAFRASC*ATRLSR
Trigger: TCGTGACAACCTAGTGGCCAAACAACTAGCTCGGAA...TGCAGGATTCTCCTGTGAAATAGTGAGAGCTGAAGTAGATGCTGGTTTTTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp CTAATGAACAGGTCTAGTAGCTGTTCCTTGGAAAAACCAGCATCTACTTCAGCTGGAAGGTTCTCCTCATaGATCACCCTGTTCCCTTGT +
Preference number: 5 (lower is better)
Translates to: LMNRSSSCSLEKPASTSAGRFSS*ITLFPC
Trigger: ACAAGGGAACAGGGTGATCAATGAGGAGAACCTTCC...AGCTGAAGTAGATGCTGGTTTTTCCAAGGAACAGCTACTAGACCTGTTCATTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp CATGCCCAGGAACTACAGGACAAGACAGGAAATATTTTGGTCCAAGAAGTGCTTCAGAACCATAGTTGCTaGGTTCAATCTCACCCACTG +
Preference number: 5 (lower is better)
Translates to: HAQELQDKTGNILVQEVLQNHSC*VQSHPL
Trigger: CAGTGGGTGAGATTGAACCAAGCAACTATGGTTCTG...AAGCACTTCTTGGACCAAAATATTTCCTGTCTTGTCCTGTAGTTCCTGGGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACCCTGGAGACAGGCCTaGGCGATGGTTCCCATCAGA +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEPWRQA*AMVPIR
Trigger: TCTGATGGGAACCATCGCCAAGGCCTGTCTCCAGGG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp CCTGACAAAAGCACAGTGATGTGCTCTGCCTTATTCTTCCTCATAAAGTCCCACCTGGAATCAGCAATCTaGCTGATATCAGACTCAGAC +
Preference number: 5 (lower is better)
Translates to: PDKSTVMCSALFFLIKSHLESAI*LISDSD
Trigger: GTCTGAGTCTGATATCAGCAAGATTGCTGATTCCAG...GTGGGACTTTATGAGGAAGAATAAGGCAGAGCACATCACTGTGCTTTTGTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS TCA 90 bp CTTTGGGTAGTATTTCCATTTTGGTCTGGGTCGTTAGCATTGCCCTaGAATCTAAATCTAGCTGCTTGGATTCGTGGGTTTAGACCTGGA +
Preference number: 5 (lower is better)
Translates to: LWVVFPFWSGSLALP*NLNLAAWIRGFRPG
Trigger: TCCAGGTCTAAACCCACGAATCCAAGCAGCTAGATTTAGATTTCAGGGCAATGCTAACGACCCAGACCAAAATGGAAATACTACCCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CAA 90 bp GATTTTCAAGAGGTGCCAAAAAGTCCCTCAATAACTCCGACAGTGAAGATTTTTTTGCCTGAGAGCTGCTaGCACTCTTTGACCAGCATC +
Preference number: 5 (lower is better)
Translates to: DFQEVPKSPSITPTVKIFLPESC*HSLTSI
Trigger: GATGCTGGTCAAAGAGTGCAAGCAGCTCTCAGGCAA...AAAAATCTTCACTGTCGGAGTTATTGAGGGACTTTTTGGCACCTCTTGAAAATC
44% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp CTTTATTTCCATTTTTACAGGCCAGGTATAGAGGTGTCTGTCCTCCATCAGCAGCCATTTTCCTCAATTTaGTTTGCACTTGGAGGTGGG +
Preference number: 5 (lower is better)
Translates to: LYFHFYRPGIEVSVLHQQPFSSI*FALGGG
Trigger: CCCACCTCCAAGTGCAAACAAAATTGAGGAAAATGG...CTGCTGATGGAGGACAGACACCTCTATACCTGGCCTGTAAAAATGGAAATAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGGGGTGTGCTACTGGTaGGATCTGGTGTTGAGCCAG +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEGVCYW*DLVLSQ
Trigger: CTGGCTCAACACCAGATCCAACCAGTAGCACACCCC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CAA 90 bp TTTTTCATACCTTCAGTGCTTAGGTCTGGCTTATTCCAGGTGGGTAAAGAGAAGATGTACTATGTAGTCTaGCAAGCTTCCTTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: FFIPSVLRSGLFQVGKEKMYYVV*QASFWA
Trigger: GGCCCAGAAGGAAGCTTGCAAGACTACATAGTACAT...CTTCTCTTTACCCACCTGGAATAAGCCAGACCTAAGCACTGAAGGTATGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp CCAGAGAGAGTCTCTGATCCAAATTCAACGTCAGTGATAGATCATTCTCTAAAGGCTGCATTCAGTAGTTaGATGGCTGCTGAGAGGACT +
Preference number: 5 (lower is better)
Translates to: PERVSDPNSTSVIDHSLKAAFSS*MAAERT
Trigger: AGTCCTCTCAGCAGCCATCAAACTACTGAATGCAGC...CTTTAGAGAATGATCTATCACTGACGTTGAATTTGGATCAGAGACTCTCTCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441556.5
ENST00000445366.1
CDS-3UTR CAA 90 bp AGGCAGTTCTTAAAACCTTTGGAAGCAGCAATGTGGGCAGCAGTCCAGCCTTCTGTTGTTGATTTCTATTaGCCTTGTATTACTGCTGCT +
Preference number: 5 (lower is better)
Translates to: RQFLKPLEAAMWAAVQPSVVDFY*PCITAA
Trigger: AGCAGCAGTAATACAAGGCAAATAGAAATCAACAAC...AGAAGGCTGGACTGCTGCCCACATTGCTGCTTCCAAAGGTTTTAAGAACTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp CCTGACAAAAGCACAGTGATGTGCTCTGCCTTATTCTTCCTCATAAAGTCCCACTGTAGGCAGGCCTATTaGTTAGGTTTTTCTAGGTGT +
Preference number: 5 (lower is better)
Translates to: PDKSTVMCSALFFLIKSHCRQAY*LGFSRC
Trigger: ACACCTAGAAAAACCTAACAAATAGGCCTGCCTACA...GTGGGACTTTATGAGGAAGAATAAGGCAGAGCACATCACTGTGCTTTTGTCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAACCACCTGCTTGTTCTaGCCACGCTCTTCCTCAAGG +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTETTCLF*PRSSSR
Trigger: CCTTGAGGAAGAGCGTGGCAAGAACAAGCAGGTGGT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAATCAGGACCACCTGCTaGTTCTTGCCACGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEIRTTC*FLPRSS
Trigger: GGAAGAGCGTGGCAAGAACAAGCAGGTGGTCCTGAT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAAGCTGCTTGCACTCTTaGACCAGCATCAGGACCACC +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTESCLHS*TSIRTT
Trigger: GGTGGTCCTGATGCTGGTCAAAGAGTGCAAGCAGCT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGCCTCCTCTATGACTTaGCCTGAGAGCTGCTTGCAC +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEASSMT*PESCLH
Trigger: GTGCAAGCAGCTCTCAGGCAAAGTCATAGAGGAGGC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CAA 90 bp ATTTTAAGAGCATTCAGATTCTCCAGCAAATGCTTGCAGTCATCAGTGGCAACATTGTCTATCTCCTCTTaGAGGTCAGTGGTGTGTGCT +
Preference number: 5 (lower is better)
Translates to: ILRAFRFSSKCLQSSVATLSISS*RSVVCA
Trigger: AGCACACACCACTGACCTCAAAGAGGAGATAGACAA...TGTTGCCACTGATGACTGCAAGCATTTGCTGGAGAATCTGAATGCTCTTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGTGGAAGAGAGAGGCTaGGTTTGCTGTCACTTCCCC +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEVEERG*VCCHFP
Trigger: GGGGAAGTGACAGCAAACCAAGCCTCTCTCTTCCAC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CAA 90 bp TTGGAAAAACCAGCATCTACTTCAGCTCTCACTATTTCACAGGAGAATCCTGCATGGTACATAAGAAGCTaGAGGCTGTCCACATTACCA +
Preference number: 5 (lower is better)
Translates to: LEKPASTSALTISQENPAWYIRS*RLSTLP
Trigger: TGGTAATGTGGACAGCCTCAAGCTTCTTATGTACCA...TGCAGGATTCTCCTGTGAAATAGTGAGAGCTGAAGTAGATGCTGGTTTTTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp AAGGGTATTTTAAGAGCATTCAGATTCTCCAGCAAATGCTTGCAGTCATCAGTGTTCTCCAGCAAATGCTaGCAGTCATCAGTGGCAACA +
Preference number: 5 (lower is better)
Translates to: KGILRAFRFSSKCLQSSVFSSKC*QSSVAT
Trigger: TGTTGCCACTGATGACTGCAAGCATTTGCTGGAGAA...CACTGATGACTGCAAGCATTTGCTGGAGAATCTGAATGCTCTTAAAATACCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp CTTTCAGTGCTGCGATTTTCAAGAGGTGCCAAAAAGTCCCTCAATAACTCCGACAATGACATTATGATATaGCTCAACCAGCCTGAGGTA +
Preference number: 5 (lower is better)
Translates to: LSVLRFSRGAKKSLNNSDNDIMI*LNQPEV
Trigger: TACCTCAGGCTGGTTGAGCAATATCATAATGTCATT...GTCGGAGTTATTGAGGGACTTTTTGGCACCTCTTGAAAATCGCAGCACTGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACCACTTCACTGTCACTaGGGCATGCCCAGGAACTAC +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEPLHCH*GMPRNY
Trigger: GTAGTTCCTGGGCATGCCCAAGTGACAGTGAAGTGG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACACAGCCTGCTGTCCTaGGCTAGGGTGTCTTTTAGC +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEHSLLS*ARVSFS
Trigger: GCTAAAAGACACCCTAGCCAAGGACAGCAGGCTGTG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAAGGATGGAGAGGGGGTaGGTACAAACTGGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTERMERG*VQTGFF
Trigger: GAAGAAGCCAGTTTGTACCAACCCCCTCTCCATCCT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATTGCCTGAGAGCTGCTaGCACTCTTTGACCAGCATC +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTELPESC*HSLTSI
Trigger: GATGCTGGTCAAAGAGTGCAAGCAGCTCTCAGGCAA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACGCTCCCTTTTGCATTaGCAGAAACTAGGGGACTCC +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTERSLLH*QKLGDS
Trigger: GGAGTCCCCTAGTTTCTGCAAATGCAAAAGGGAGCG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATGGTTGGATCTGGTGTaGAGCCAGTGCTTGGTCCAT +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEWLDLV*SQCLVH
Trigger: ATGGACCAAGCACTGGCTCAACACCAGATCCAACCA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGTGCATAGGTGGAGCTaGCGAGTTCTGAGGAGCTAT +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEVHRWS*RVLRSY
Trigger: ATAGCTCCTCAGAACTCGCAAGCTCCACCTATGCAC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATGTTTGGCCACTAGGTaGTCACGACTTGTAGGCGAG +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTECLATR*SRLVGE
Trigger: CTCGCCTACAAGTCGTGACAACCTAGTGGCCAAACA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGATCACCCTGTTCCCTaGTGGCAAACTGGAAGGAGT +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEDHPVP*WQTGRS
Trigger: ACTCCTTCCAGTTTGCCACAAGGGAACAGGGTGATC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAATCAGCAGCATTGACTaGGGCTTCTGCACTCAGCAG +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEISSID*GFCTQQ
Trigger: CTGCTGAGTGCAGAAGCCCAAGTCAATGCTGCTGAT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGCAGGAACAACAGGCTaGGATATGCCTTCAGGACTC +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEAGTTG*DMPSGL
Trigger: GAGTCCTGAAGGCATATCCAAGCCTGTTGTTCCTGC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGTCCAGCCTTCTCTGTaGGCGTGGTTAATGAGGTCT +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEVQPSL*AWLMRS
Trigger: AGACCTCATTAACCACGCCAACAGAGAAGGCTGGAC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGAATCCTGCAGCCATTaGTCTGTGCTTCAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEESCSH*SVLQAE
Trigger: CTCTGCCTGAAGCACAGACAAATGGCTGCAGGATTC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp GGAAGAAAAGATTTAACTCTTGAAACACCCAACTCAGTCTTTGATTTACTGTTGGAATCCTGCAGCCATTaGTCTGTGCTTCAGGCAGAG +
Preference number: 5 (lower is better)
Translates to: GRKDLTLETPNSVFDLLLESCSH*SVLQAE
Trigger: CTCTGCCTGAAGCACAGACAAATGGCTGCAGGATTC...CAACAGTAAATCAAAGACTGAGTTGGGTGTTTCAAGAGTTAAATCTTTTCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACTGCCCAAAGCCAGGTaGTCTTTTCACAGAGGCTCT +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTELPKAR*SFHRGS
Trigger: AGAGCCTCTGTGAAAAGACAACCTGGCTTTGGGCAG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp GATCGTATGCTTCTTGCACTGAGGCCGATGTTGGAATCAGTGGTGTTATTGCAAAAAGGTATTTGTATCTaGTTGTCCTTGGTTTCTGTG +
Preference number: 5 (lower is better)
Translates to: DRMLLALRPMLESVVLLQKGICI*LSLVSV
Trigger: CACAGAAACCAAGGACAACAAGATACAAATACCTTT...TTGCAATAACACCACTGATTCCAACATCGGCCTCAGTGCAAGAAGCATACGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAACTGGCTTCTTCTCTTaGTCACCAGCACCTGCTTCA +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTETGFFS*SPAPAS
Trigger: TGAAGCAGGTGCTGGTGACAAAGAGAAGAAGCCAGT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CAA 90 bp GGAACAGGAAGAAAAGATTTAACTCTTGAAACACCCAACTCAGTCTTTGATTTAACTGGCTTCTTCTCTTaGTCACCAGCACCTGCTTCA +
Preference number: 5 (lower is better)
Translates to: GTGRKDLTLETPNSVFDLTGFFS*SPAPAS
Trigger: TGAAGCAGGTGCTGGTGACAAAGAGAAGAAGCCAGT...TAAATCAAAGACTGAGTTGGGTGTTTCAAGAGTTAAATCTTTTCTTCCTGTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATGCGGACATCCTTTCTaGCATTTTCTTGCAGTGGGC +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTECGHPF*HFLAVG
Trigger: GCCCACTGCAAGAAAATGCAAGAAAGGATGTCCGCA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACATTTCCAGCTTCTTTaGTCTGCTCTCAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEHFQLL*SALSSS
Trigger: GCTGCTGCTGAGAGCAGACAAAAGAAGCTGGAAATG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAAGAGAGAGGCTTGGTTaGCTGTCACTTCCCCTTTTC +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTERERLG*LSLPLF
Trigger: GAAAAGGGGAAGTGACAGCAAACCAAGCCTCTCTCT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGGCATGCAACAGACCTaGTCACAGTTCCTTCTGTTC +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEGMQQT*SQFLLF
Trigger: GAACAGAAGGAACTGTGACAAGGTCTGTTGCATGCC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATGCACACGCTCCCTTTaGCATTTGCAGAAACTAGGG +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTECTRSL*HLQKLG
Trigger: CCCTAGTTTCTGCAAATGCAAAAGGGAGCGTGTGCA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CAA 90 bp AAAGATTTAACTCTTGAAACACCCAACTCAGTCTTTGATTTACTGTTGCTGCATTGCACACGCTCCCTTTaGCATTTGCAGAAACTAGGG +
Preference number: 5 (lower is better)
Translates to: KDLTLETPNSVFDLLLLHCTRSL*HLQKLG
Trigger: CCCTAGTTTCTGCAAATGCAAAAGGGAGCGTGTGCA...ATGCAGCAACAGTAAATCAAAGACTGAGTTGGGTGTTTCAAGAGTTAAATCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATTCCGAGCTAGTTGTTaGGCCACTAGGTTGTCACGA +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEFRASC*ATRLSR
Trigger: TCGTGACAACCTAGTGGCCAAACAACTAGCTCGGAA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGTTTTGTTATCAACTTaGGCCCCTGTGTTCGAGGCC +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEVLLST*APVFEA
Trigger: GGCCTCGAACACAGGGGCCAAAGTTGATAACAAAAC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGGAAGGTTCTCCTCATaGATCACCCTGTTCCCTTGT +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEGRFSS*ITLFPC
Trigger: ACAAGGGAACAGGGTGATCAATGAGGAGAACCTTCC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACCAAGTCAAAGACACTaGACTCGGACTCCTCCTCAT +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEPSQRH*TRTPPH
Trigger: ATGAGGAGGAGTCCGAGTCAAGTGTCTTTGACTTGG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAACAGTCCGATTGCACTaGTCTCTCCTTTCTGGCTCA +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTETVRLH*SLLSGS
Trigger: TGAGCCAGAAAGGAGAGACAAGTGCAATCGGACTGT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp AGATTGATCTCATACACATCAGAGACTTGCACAATCCTGGCTTCATCACTTGCTATCCATCAGAAGAGATaGCCTGGAAATGATTTGTCA +
Preference number: 5 (lower is better)
Translates to: RLISYTSETCTILASSLAIHQKR*PGNDLS
Trigger: TGACAAATCATTTCCAGGCAATCTCTTCTGATGGAT...AGCAAGTGATGAAGCCAGGATTGTGCAAGTCTCTGATGTGTATGAGATCAATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416239.1
CDS-3UTR CAA 90 bp GATTTTCAAGAGGTGCCAAAAAGTCCCTCAATAACTCCGACAGTGAAGATTTTTGAATCAGTGGTGTTATaGCAAGTCACGTCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: DFQEVPKSPSITPTVKIFESVVL*QVTSSR
Trigger: TCTGGAAGACGTGACTTGCAATAACACCACTGATTC...AAAAATCTTCACTGTCGGAGTTATTGAGGGACTTTTTGGCACCTCTTGAAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGCACTGAGGCCGATGTaGGAATCAGTGGTGTTATTG +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEALRPM*ESVVLL
Trigger: CAATAACACCACTGATTCCAACATCGGCCTCAGTGC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGCTGCATTCAGTAGTTaGATGGCTGCTGAGAGGACT +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEAAFSS*MAAERT
Trigger: AGTCCTCTCAGCAGCCATCAAACTACTGAATGCAGC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp ATTTTAAGAGCATTCAGATTCTCCAGCAAATGCTTGCAGTCATCAGTGGCAACACACCCAACTCAGTCTTaGATTTACTGTTGCTGCATT +
Preference number: 5 (lower is better)
Translates to: ILRAFRFSSKCLQSSVATHPTQS*IYCCCI
Trigger: AATGCAGCAACAGTAAATCAAAGACTGAGTTGGGTG...TGTTGCCACTGATGACTGCAAGCATTTGCTGGAGAATCTGAATGCTCTTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACTTTCTTGCATTTTCTaGCAGTGGGCCATGACTGCT +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTELSCIF*QWAMTA
Trigger: AGCAGTCATGGCCCACTGCAAGAAAATGCAAGAAAG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATTTTCCTCTTCCAGTTaGGCCATTACGTCTTCGAGC +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEFSSSS*AITSSS
Trigger: GCTCGAAGACGTAATGGCCAAACTGGAAGAGGAAAA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATTGTCTATCTCCTCTTaGAGGTCAGTGGTGTGTGCT +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTELSISS*RSVVCA
Trigger: AGCACACACCACTGACCTCAAAGAGGAGATAGACAA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACCAAACGCCTATCTTTaGTCTTCCGTGGAAGAGAGA +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEPNAYL*SSVEER
Trigger: TCTCTCTTCCACGGAAGACAAAAGATAGGCGTTTGG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CAA 90 bp GGAAGAAAAGATTTAACTCTTGAAACACCCAACTCAGTCTTTGATTTACTGTTGCCAAACGCCTATCTTTaGTCTTCCGTGGAAGAGAGA +
Preference number: 5 (lower is better)
Translates to: GRKDLTLETPNSVFDLLLPNAYL*SSVEER
Trigger: TCTCTCTTCCACGGAAGACAAAAGATAGGCGTTTGG...CAACAGTAAATCAAAGACTGAGTTGGGTGTTTCAAGAGTTAAATCTTTTCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACAATTTTGTTTGCACTaGGAGGTGGGAAAGCGGGTA +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEQFCLH*EVGKRV
Trigger: TACCCGCTTTCCCACCTCCAAGTGCAAACAAAATTG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACTGTCTATAATAACCTaGAGTTGGGGGTGTGGTGGA +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTELSIIT*SWGCGG
Trigger: TCCACCACACCCCCAACTCAAGGTTATTATAGACAG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGTCGAAGCCACAGTTTaGTTATCAACTTTGGCCCCT +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEVEATV*LSTLAP
Trigger: AGGGGCCAAAGTTGATAACAAAACTGTGGCTTCGAC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp AAAGATTTAACTCTTGAAACACCCAACTCAGTCTTTGATTTACTGTTGCTGCATGTCGAAGCCACAGTTTaGTTATCAACTTTGGCCCCT +
Preference number: 5 (lower is better)
Translates to: KDLTLETPNSVFDLLLLHVEATV*LSTLAP
Trigger: AGGGGCCAAAGTTGATAACAAAACTGTGGCTTCGAC...ATGCAGCAACAGTAAATCAAAGACTGAGTTGGGTGTTTCAAGAGTTAAATCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATCATGCACAGTCCGATaGCACTTGTCTCTCCTTTCT +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTESCTVR*HLSLLS
Trigger: AGAAAGGAGAGACAAGTGCAATCGGACTGTGCATGA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp GGAAGAAAAGATTTAACTCTTGAAACACCCAACTCAGTCTTTGATTTACTGTTGTCATGCACAGTCCGATaGCACTTGTCTCTCCTTTCT +
Preference number: 5 (lower is better)
Translates to: GRKDLTLETPNSVFDLLLSCTVR*HLSLLS
Trigger: AGAAAGGAGAGACAAGTGCAATCGGACTGTGCATGA...CAACAGTAAATCAAAGACTGAGTTGGGTGTTTCAAGAGTTAAATCTTTTCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATTCTCCAGCAAATGCTaGCAGTCATCAGTGGCAACA +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEFSSKC*QSSVAT
Trigger: TGTTGCCACTGATGACTGCAAGCATTTGCTGGAGAA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACAGAACCATAGTTGCTaGGTTCAATCTCACCCACTG +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEQNHSC*VQSHPL
Trigger: CAGTGGGTGAGATTGAACCAAGCAACTATGGTTCTG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp ACCAGTAGTATTAGTTTCAGATTGATCTCATACACATCAGAGACTTGCACAATCGAATCAGTGGTGTTATaGCAAGTCACGTCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: TSSISFRLISYTSETCTIESVVL*QVTSSR
Trigger: TCTGGAAGACGTGACTTGCAATAACACCACTGATTC...GATTGTGCAAGTCTCTGATGTGTATGAGATCAATCTGAAACTAATACTACTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416239.1
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAATGTACTATGTAGTCTaGCAAGCTTCCTTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEMYYVV*QASFWA
Trigger: GGCCCAGAAGGAAGCTTGCAAGACTACATAGTACAT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACCATTTTCCTCAATTTaGTTTGCACTTGGAGGTGGG +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEPFSSI*FALGGG
Trigger: CCCACCTCCAAGTGCAAACAAAATTGAGGAAAATGG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGTGTTGAGCCAGTGCTaGGTCCATTTTCCTCAATTT +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEVLSQC*VHFPQF
Trigger: AAATTGAGGAAAATGGACCAAGCACTGGCTCAACAC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATTTTTATCAGCAGCATaGACTTGGGCTTCTGCACTC +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEFLSAA*TWASAL
Trigger: GAGTGCAGAAGCCCAAGTCAATGCTGCTGATAAAAA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATGGTACATAAGAAGCTaGAGGCTGTCCACATTACCA +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEWYIRS*RLSTLP
Trigger: TGGTAATGTGGACAGCCTCAAGCTTCTTATGTACCA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACAGTTCTTAAAACCTTaGGAAGCAGCAATGTGGGCA +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEQFLKP*EAAMWA
Trigger: TGCCCACATTGCTGCTTCCAAAGGTTTTAAGAACTG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGAATCAGTGGTGTTATaGCAAGTCACGTCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEESVVL*QVTSSR
Trigger: TCTGGAAGACGTGACTTGCAATAACACCACTGATTC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACTTCTTACTGGGAGATaGTTTCACTGGGATCAGACA +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTELLTGR*FHWDQT
Trigger: TGTCTGATCCCAGTGAAACAATCTCCCAGTAAGAAG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp CCAGAGAGAGTCTCTGATCCAAATTCAACGTCAGTGATAGATCATTCTCTAAAGTTTTCACAGAGGCTCTaGACAATATTGCTTCTTGAA +
Preference number: 5 (lower is better)
Translates to: PERVSDPNSTSVIDHSLKFSQRL*TILLLE
Trigger: TTCAAGAAGCAATATTGTCAAGAGCCTCTGTGAAAA...CTTTAGAGAATGATCTATCACTGACGTTGAATTTGGATCAGAGACTCTCTCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACTGGAATCAGCAATCTaGCTGATATCAGACTCAGAC +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTELESAI*LISDSD
Trigger: GTCTGAGTCTGATATCAGCAAGATTGCTGATTCCAG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGTCAAACTCAGAGAGTaGTTTTTCCATCTGAGCTTC +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEVKLRE*FFHLSF
Trigger: GAAGCTCAGATGGAAAAACAACTCTCTGAGTTTGAC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATTTCCTCAATTTTGTTaGCACTTGGAGGTGGGAAAG +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEFPQFC*HLEVGK
Trigger: CTTTCCCACCTCCAAGTGCAAACAAAATTGAGGAAA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGGTAGTATTTCCATTTaGGTCTGGGTCGTTAGCATT +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEGSISI*VWVVSI
Trigger: AATGCTAACGACCCAGACCAAAATGGAAATACTACC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGTTTTTACACTTCGATaGGTTCCAGCTTCCAACAAG +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEVFTLR*VPASNK
Trigger: CTTGTTGGAAGCTGGAACCAATCGAAGTGTAAAAAC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATCTAGTAGCTGTTCCTaGGAAAAACCAGCATCTACT +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTESSSCS*EKPAST
Trigger: AGTAGATGCTGGTTTTTCCAAGGAACAGCTACTAGA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAACACCCAACTCAGTCTTaGATTTACTGTTGCTGCATT +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEHPTQS*IYCCCI
Trigger: AATGCAGCAACAGTAAATCAAAGACTGAGTTGGGTG...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATGTAGGCAGGCCTATTaGTTAGGTTTTTCTAGGTGT +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTECRQAY*LGFSRC
Trigger: ACACCTAGAAAAACCTAACAAATAGGCCTGCCTACA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAATCATTTTCCTCATCTaGTCTATCTCCTCTTTGAGG +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEIIFLI*SISSLR
Trigger: CCTCAAAGAGGAGATAGACAAGATGAGGAAAATGAT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATCCCATGATGTCTGTTaGCGGATATTTAAAGCACAT +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTESHDVC*RIFKAH
Trigger: ATGTGCTTTAAATATCCGCAAACAGACATCATGGGA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAATCCATCAGAAGAGATaGCCTGGAAATGATTTGTCA +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEIHQKR*PGNDLS
Trigger: TGACAAATCATTTCCAGGCAATCTCTTCTGATGGAT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAAATGACATTATGATATaGCTCAACCAGCCTGAGGTA +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTENDIMI*LNQPEV
Trigger: TACCTCAGGCTGGTTGAGCAATATCATAATGTCATT...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAATTTTCACAGAGGCTCTaGACAATATTGCTTCTTGAA +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEFSQRL*TILLLE
Trigger: TTCAAGAAGCAATATTGTCAAGAGCCTCTGTGAAAA...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS-3UTR CAA 90 bp AACTACTTGAAAAGTTGGCATAACTTCCTGGTATTGAAGTTCAATCCTACAGAAGTTGTTGATTTCTATTaGCCTTGTATTACTGCTGCT +
Preference number: 5 (lower is better)
Translates to: NYLKSWHNFLVLKFNPTEVVDFY*PCITAA
Trigger: AGCAGCAGTAATACAAGGCAAATAGAAATCAACAAC...TTCTGTAGGATTGAACTTCAATACCAGGAAGTTATGCCAACTTTTCAAGTAGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS TCA 72 bp TTCAGTCCGGGGGTTGCAGCAGGCCAGGCACCCACCTaGGACGTGGCCAGGGCTGAAACGGCACAGCCTGCA +
Preference number: 6 (lower is better)
Translates to: FSPGVAAGQAPT*DVARAETAQPA
Trigger: TGCAGGCTGTGCCGTTTCAGCCCTGGCCACGTCTCAGGTGGGTGCCTGGCCTGCTGCAACCCCCGGACTGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000160373.8
CDS CAA 90 bp TTAAACTGGTCCGACCAACTGGAGGGTGGGTGCCAACATCCCCTGTaGGGGGCACTCCAGGCCTTGAGGGAGCACCTGCTTGAGGGCTTG +
Preference number: 6 (lower is better)
Translates to: LNWSDQLEGGCQHPL*GALQALREHLLEGL
Trigger: CAAGCCCTCAAGCAGGTGCTCCCTCAAGGCCTGGAGTGCCCCCAACAGGGGATGTTGGCACCCACCCTCCAGTTGGTCGGACCAGTTTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS GCA 72 bp CGGTGGGAGGGGCAGCGTTACTGGGAAGTGGGGGTGTaGTACTGGTTGGATCTGGTGTTGAGCCAGTGCTTG +
Preference number: 6 (lower is better)
Translates to: RWEGQRYWEVGV*YWLDLVLSQCL
Trigger: CAAGCACTGGCTCAACACCAGATCCAACCAGTAGCACACCCCCACTTCCCAGTAACGCTGCCCCTCCCACCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS CCA 72 bp TGCCTGGTGTTTGAGCGGTGGGAGGGGCAGCGTTACTaGGAAGTGGGGGTGTGCTACTGGTTGGATCTGGTG +
Preference number: 6 (lower is better)
Translates to: CLVFERWEGQRY*EVGVCYWLDLV
Trigger: CACCAGATCCAACCAGTAGCACACCCCCACTTCCCAGTAACGCTGCCCCTCCCACCGCTCAAACACCAGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS CAA 90 bp GTGCATAGGTGGAGCTTGCGAGTTCTGAGGAGCTATGCCTGGTGTTaGAGCGGTGGGAGGGGCAGCGTTACTGGGAAGTGGGGGTGTGCT +
Preference number: 6 (lower is better)
Translates to: VHRWSLRVLRSYAWC*SGGRGSVTGKWGCA
Trigger: AGCACACCCCCACTTCCCAGTAACGCTGCCCCTCCCACCGCTCAAACACCAGGCATAGCTCCTCAGAACTCGCAAGCTCCACCTATGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS GCA 72 bp GAGTCTTTAAACTGGTCCGACCAACTGGAGGGTGGGTaGCAACATCCCCTGTTGGGGGCACTCCAGGCCTTG +
Preference number: 6 (lower is better)
Translates to: ESLNWSDQLEGG*QHPLLGALQAL
Trigger: CAAGGCCTGGAGTGCCCCCAACAGGGGATGTTGGCACCCACCCTCCAGTTGGTCGGACCAGTTTAAAGACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS CCA 72 bp CATAGGTGGAGCTTGCGAGTTCTGAGGAGCTATGCCTaGTGTTTGAGCGGTGGGAGGGGCAGCGTTACTGGG +
Preference number: 6 (lower is better)
Translates to: HRWSLRVLRSYA*CLSGGRGSVTG
Trigger: CCCAGTAACGCTGCCCCTCCCACCGCTCAAACACCAGGCATAGCTCCTCAGAACTCGCAAGCTCCACCTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS CAA 72 bp TGGAGCTTGCGAGTTCTGAGGAGCTATGCCTGGTGTTaGAGCGGTGGGAGGGGCAGCGTTACTGGGAAGTGG +
Preference number: 6 (lower is better)
Translates to: WSLRVLRSYAWC*SGGRGSVTGKW
Trigger: CCACTTCCCAGTAACGCTGCCCCTCCCACCGCTCAAACACCAGGCATAGCTCCTCAGAACTCGCAAGCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS CAA 90 bp CCTGAGAGCTGCTTGCACTCTTTGACCAGCATCAGGACCACCTGCTaGTTCTTGCCACGCTCTTCCTCAAGGCGGGCAGCCAGCTTCTTG +
Preference number: 6 (lower is better)
Translates to: PESCLHSLTSIRTTC*FLPRSSSRRAASFL
Trigger: CAAGAAGCTGGCTGCCCGCCTTGAGGAAGAGCGTGGCAAGAACAAGCAGGTGGTCCTGATGCTGGTCAAAGAGTGCAAGCAGCTCTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000160373.8
ENST00000434890.5
ENST00000441556.5
ENST00000487820.1
CDS CCA 72 bp GTAGGAATGACAAGGGAACTGTCTGAACATGCAGGTTaGTTCAGTCCGGGGGTTGCAGCAGGCCAGGCACCC +
Preference number: 6 (lower is better)
Translates to: VGMTRELSEHAG*FSPGVAAGQAP
Trigger: GGGTGCCTGGCCTGCTGCAACCCCCGGACTGAACCAACCTGCATGTTCAGACAGTTCCCTTGTCATTCCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000160373.8
CDS CAA 72 bp TGCTTGCACTCTTTGACCAGCATCAGGACCACCTGCTaGTTCTTGCCACGCTCTTCCTCAAGGCGGGCAGCC +
Preference number: 6 (lower is better)
Translates to: CLHSLTSIRTTC*FLPRSSSRRAA
Trigger: GGCTGCCCGCCTTGAGGAAGAGCGTGGCAAGAACAAGCAGGTGGTCCTGATGCTGGTCAAAGAGTGCAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000160373.8
ENST00000434890.5
ENST00000441556.5
ENST00000487820.1
CDS CAA 90 bp AGCTGCTTGCACTCTTTGACCAGCATCAGGACCACCTGCTTGTTCTaGCCACGCTCTTCCTCAAGGCGGGCAGCCAGCTTCTTGTGCTCT +
Preference number: 6 (lower is better)
Translates to: SCLHSLTSIRTTCLF*PRSSSRRAASFLCS
Trigger: AGAGCACAAGAAGCTGGCTGCCCGCCTTGAGGAAGAGCGTGGCAAGAACAAGCAGGTGGTCCTGATGCTGGTCAAAGAGTGCAAGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000160373.8
ENST00000434890.5
ENST00000441556.5
ENST00000487820.1
CDS TCA 72 bp GTTGGGGGCACTCCAGGCCTTGAGGGAGCACCTGCTTaGGGGCTTGTAAATCTTGACAGTGCTTGGGTCACA +
Preference number: 6 (lower is better)
Translates to: VGGTPGLEGAPA*GLVNLDSAWVT
Trigger: TGTGACCCAAGCACTGTCAAGATTTACAAGCCCTCAAGCAGGTGCTCCCTCAAGGCCTGGAGTGCCCCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS GCA 72 bp AGCTGCTTGCACTCTTTGACCAGCATCAGGACCACCTaGTTGTTCTTGCCACGCTCTTCCTCAAGGCGGGCA +
Preference number: 6 (lower is better)
Translates to: SCLHSLTSIRTT*LFLPRSSSRRA
Trigger: TGCCCGCCTTGAGGAAGAGCGTGGCAAGAACAAGCAGGTGGTCCTGATGCTGGTCAAAGAGTGCAAGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000160373.8
ENST00000434890.5
ENST00000441556.5
ENST00000487820.1
CDS CCA 72 bp AGGAAGCCTGCCTGTCAATACCTGGTCTGGCCATGGTaGCACTGGTGCACACGCTCCCTTTTGCATTTGCAG +
Preference number: 6 (lower is better)
Translates to: RKPACQYLVWPW*HWCTRSLLHLQ
Trigger: CTGCAAATGCAAAAGGGAGCGTGTGCACCAGTGCCACCATGGCCAGACCAGGTATTGACAGGCAGGCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS CCA 72 bp AGTCACCATAGGAAGCCTGCCTGTCAATACCTGGTCTaGCCATGGTGGCACTGGTGCACACGCTCCCTTTTG +
Preference number: 6 (lower is better)
Translates to: SHHRKPACQYLV*PWWHWCTRSLL
Trigger: CAAAAGGGAGCGTGTGCACCAGTGCCACCATGGCCAGACCAGGTATTGACAGGCAGGCTTCCTATGGTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS CCA 72 bp AATCAAGTCACCATAGGAAGCCTGCCTGTCAATACCTaGTCTGGCCATGGTGGCACTGGTGCACACGCTCCC +
Preference number: 6 (lower is better)
Translates to: NQVTIGSLPVNT*SGHGGTGAHAP
Trigger: GGGAGCGTGTGCACCAGTGCCACCATGGCCAGACCAGGTATTGACAGGCAGGCTTCCTATGGTGACTTGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS CAA 72 bp GTCTGGCCATGGTGGCACTGGTGCACACGCTCCCTTTaGCATTTGCAGAAACTAGGGGACTCCCTGTGGAAG +
Preference number: 6 (lower is better)
Translates to: VWPWWHWCTRSL*HLQKLGDSLWK
Trigger: CTTCCACAGGGAGTCCCCTAGTTTCTGCAAATGCAAAAGGGAGCGTGTGCACCAGTGCCACCATGGCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS CAA 90 bp GGCCCCTGTGTTCGAGGCCCTGCTGCTGTCTATAATAACCTTGAGTaGGGGGTGTGGTGGAGAAGGAGTTTGGGAGAGCCCTGGCTTTTT +
Preference number: 6 (lower is better)
Translates to: GPCVRGPAAVYNNLE*GVWWRRSLGEPWLF
Trigger: AAAAAGCCAGGGCTCTCCCAAACTCCTTCTCCACCACACCCCCAACTCAAGGTTATTATAGACAGCAGCAGGGCCTCGAACACAGGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS GCA 72 bp AGCTTCTGGGCCTCCTCTATGACTTTGCCTGAGAGCTaGTTGCACTCTTTGACCAGCATCAGGACCACCTGC +
Preference number: 6 (lower is better)
Translates to: SFWASSMTLPES*LHSLTSIRTTC
Trigger: GCAGGTGGTCCTGATGCTGGTCAAAGAGTGCAAGCAGCTCTCAGGCAAAGTCATAGAGGAGGCCCAGAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000160373.8
ENST00000434890.5
ENST00000441556.5
ENST00000487820.1
CDS CCA 72 bp CATAGGAAGCCTGCCTGTCAATACCTGGTCTGGCCATaGTGGCACTGGTGCACACGCTCCCTTTTGCATTTG +
Preference number: 6 (lower is better)
Translates to: HRKPACQYLVWP*WHWCTRSLLHL
Trigger: CAAATGCAAAAGGGAGCGTGTGCACCAGTGCCACCATGGCCAGACCAGGTATTGACAGGCAGGCTTCCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS CAA 72 bp GGGCAGCGTTACTGGGAAGTGGGGGTGTGCTACTGGTaGGATCTGGTGTTGAGCCAGTGCTTGGTCCATTTT +
Preference number: 6 (lower is better)
Translates to: GQRYWEVGVCYW*DLVLSQCLVHF
Trigger: AAAATGGACCAAGCACTGGCTCAACACCAGATCCAACCAGTAGCACACCCCCACTTCCCAGTAACGCTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS CAA 90 bp TTCTGGGCCTCCTCTATGACTTTGCCTGAGAGCTGCTTGCACTCTTaGACCAGCATCAGGACCACCTGCTTGTTCTTGCCACGCTCTTCC +
Preference number: 6 (lower is better)
Translates to: FWASSMTLPESCLHS*TSIRTTCLFLPRSS
Trigger: GGAAGAGCGTGGCAAGAACAAGCAGGTGGTCCTGATGCTGGTCAAAGAGTGCAAGCAGCTCTCAGGCAAAGTCATAGAGGAGGCCCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000160373.8
ENST00000434890.5
ENST00000441556.5
ENST00000487820.1
CDS CCA 72 bp CCTGCCTGTCAATACCTGGTCTGGCCATGGTGGCACTaGTGCACACGCTCCCTTTTGCATTTGCAGAAACTA +
Preference number: 6 (lower is better)
Translates to: PACQYLVWPWWH*CTRSLLHLQKL
Trigger: TAGTTTCTGCAAATGCAAAAGGGAGCGTGTGCACCAGTGCCACCATGGCCAGACCAGGTATTGACAGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS CCA 72 bp CTCTGTCAACTCGTGCTACACCATGAGTCTTTAAACTaGTCCGACCAACTGGAGGGTGGGTGCCAACATCCC +
Preference number: 6 (lower is better)
Translates to: LCQLVLHHESLN*SDQLEGGCQHP
Trigger: GGGATGTTGGCACCCACCCTCCAGTTGGTCGGACCAGTTTAAAGACTCATGGTGTAGCACGAGTTGACAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS CAA 72 bp TTCTGGGCCTCCTCTATGACTTTGCCTGAGAGCTGCTaGCACTCTTTGACCAGCATCAGGACCACCTGCTTG +
Preference number: 6 (lower is better)
Translates to: FWASSMTLPESC*HSLTSIRTTCL
Trigger: CAAGCAGGTGGTCCTGATGCTGGTCAAAGAGTGCAAGCAGCTCTCAGGCAAAGTCATAGAGGAGGCCCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000160373.8
ENST00000434890.5
ENST00000441556.5
ENST00000487820.1
CDS CAA 72 bp TTGAGGTCAGTGGTGTGTGCTTCTTCCCGGTTCAGCTaGGCACGAAGCTGTTCCCGCTCAGTGTCAAACTCA +
Preference number: 6 (lower is better)
Translates to: LRSVVCASSRFS*ARSCSRSVSNS
Trigger: TGAGTTTGACACTGAGCGGGAACAGCTTCGTGCCAAGCTGAACCGGGAAGAAGCACACACCACTGACCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS CAA 90 bp TCTTCGAGCTTCTGGGCCTCCTCTATGACTTTGCCTGAGAGCTGCTaGCACTCTTTGACCAGCATCAGGACCACCTGCTTGTTCTTGCCA +
Preference number: 6 (lower is better)
Translates to: SSSFWASSMTLPESC*HSLTSIRTTCLFLP
Trigger: TGGCAAGAACAAGCAGGTGGTCCTGATGCTGGTCAAAGAGTGCAAGCAGCTCTCAGGCAAAGTCATAGAGGAGGCCCAGAAGCTCGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000160373.8
ENST00000434890.5
ENST00000441556.5
ENST00000487820.1
CDS CAA 90 bp AGTTTGGCCATTACGTCTTCGAGCTTCTGGGCCTCCTCTATGACTTaGCCTGAGAGCTGCTTGCACTCTTTGACCAGCATCAGGACCACC +
Preference number: 6 (lower is better)
Translates to: SLAITSSSFWASSMT*PESCLHSLTSIRTT
Trigger: GGTGGTCCTGATGCTGGTCAAAGAGTGCAAGCAGCTCTCAGGCAAAGTCATAGAGGAGGCCCAGAAGCTCGAAGACGTAATGGCCAAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000160373.8
ENST00000434890.5
ENST00000441556.5
ENST00000487820.1
CDS CAA 90 bp CAATACCTGGTCTGGCCATGGTGGCACTGGTGCACACGCTCCCTTTaGCATTTGCAGAAACTAGGGGACTCCCTGTGGAAGGTTTTACAG +
Preference number: 6 (lower is better)
Translates to: QYLVWPWWHWCTRSL*HLQKLGDSLWKVLQ
Trigger: CTGTAAAACCTTCCACAGGGAGTCCCCTAGTTTCTGCAAATGCAAAAGGGAGCGTGTGCACCAGTGCCACCATGGCCAGACCAGGTATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS CAA 90 bp ACCCTGTTCCCTTGTGGCAAACTGGAAGGAGTCGAAGCCACAGTTTaGTTATCAACTTTGGCCCCTGTGTTCGAGGCCCTGCTGCTGTCT +
Preference number: 6 (lower is better)
Translates to: TLFPCGKLEGVEATV*LSTLAPVFEALLLS
Trigger: AGACAGCAGCAGGGCCTCGAACACAGGGGCCAAAGTTGATAACAAAACTGTGGCTTCGACTCCTTCCAGTTTGCCACAAGGGAACAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS TCA 72 bp GGAGGAGGATTTCCTCTGTCAACTCGTGCTACACCATaGGTCTTTAAACTGGTCCGACCAACTGGAGGGTGG +
Preference number: 6 (lower is better)
Translates to: GGGFPLSTRATP*VFKLVRPTGGW
Trigger: CCACCCTCCAGTTGGTCGGACCAGTTTAAAGACTCATGGTGTAGCACGAGTTGACAGAGGAAATCCTCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS TCA 72 bp TTCCTCATAAAGTCCCACGGGGACTGCGCGAAGCTCTaGCCCACTGACCACGGCACATTTCCTAGTTTCAAA +
Preference number: 6 (lower is better)
Translates to: FLIKSHGDCAKL*PTDHGTFPSFK
Trigger: TTTGAAACTAGGAAATGTGCCGTGGTCAGTGGGTCAGAGCTTCGCGCAGTCCCCGTGGGACTTTATGAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482124.1
CDS CCA 72 bp TCCTCTTCCAGTTTGGCCATTACGTCTTCGAGCTTCTaGGCCTCCTCTATGACTTTGCCTGAGAGCTGCTTG +
Preference number: 6 (lower is better)
Translates to: SSSSLAITSSSF*ASSMTLPESCL
Trigger: CAAGCAGCTCTCAGGCAAAGTCATAGAGGAGGCCCAGAAGCTCGAAGACGTAATGGCCAAACTGGAAGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000434890.5
ENST00000441556.5
CDS CCA 72 bp AAACGGCACAGCCTGCAGGTGCCACAGTTAAATCTATaGATGGTTTTGGTGGCAGCTGAGGGGAGGATGACT +
Preference number: 6 (lower is better)
Translates to: KRHSLQVPQLNL*MVLVAAEGRMT
Trigger: AGTCATCCTCCCCTCAGCTGCCACCAAAACCATCCATAGATTTAACTGTGGCACCTGCAGGCTGTGCCGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS CAA 72 bp CCTTGTGGCAAACTGGAAGGAGTCGAAGCCACAGTTTaGTTATCAACTTTGGCCCCTGTGTTCGAGGCCCTG +
Preference number: 6 (lower is better)
Translates to: PCGKLEGVEATV*LSTLAPVFEAL
Trigger: CAGGGCCTCGAACACAGGGGCCAAAGTTGATAACAAAACTGTGGCTTCGACTCCTTCCAGTTTGCCACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS CAA 90 bp ATCTCCTCTTTGAGGTCAGTGGTGTGTGCTTCTTCCCGGTTCAGCTaGGCACGAAGCTGTTCCCGCTCAGTGTCAAACTCAGAGAGTTGT +
Preference number: 6 (lower is better)
Translates to: ISSLRSVVCASSRFS*ARSCSRSVSNSESC
Trigger: ACAACTCTCTGAGTTTGACACTGAGCGGGAACAGCTTCGTGCCAAGCTGAACCGGGAAGAAGCACACACCACTGACCTCAAAGAGGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS CAA 90 bp AGTGCTTGGGTCACAGTATTCCGAGCTAGTTGTTTGGCCACTAGGTaGTCACGACTTGTAGGCGAGACATCTCTTGACGGAGGACTTTGG +
Preference number: 6 (lower is better)
Translates to: SAWVTVFRASCLATR*SRLVGETSLDGGLW
Trigger: CCAAAGTCCTCCGTCAAGAGATGTCTCGCCTACAAGTCGTGACAACCTAGTGGCCAAACAACTAGCTCGGAATACTGTGACCCAAGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS CCA 72 bp CCTGCTGCTGTCTATAATAACCTTGAGTTGGGGGTGTaGTGGAGAAGGAGTTTGGGAGAGCCCTGGCTTTTT +
Preference number: 6 (lower is better)
Translates to: PAAVYNNLELGV*WRRSLGEPWLF
Trigger: AAAAAGCCAGGGCTCTCCCAAACTCCTTCTCCACCACACCCCCAACTCAAGGTTATTATAGACAGCAGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS CAA 72 bp ATTACGTCTTCGAGCTTCTGGGCCTCCTCTATGACTTaGCCTGAGAGCTGCTTGCACTCTTTGACCAGCATC +
Preference number: 6 (lower is better)
Translates to: ITSSSFWASSMT*PESCLHSLTSI
Trigger: GATGCTGGTCAAAGAGTGCAAGCAGCTCTCAGGCAAAGTCATAGAGGAGGCCCAGAAGCTCGAAGACGTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000160373.8
ENST00000434890.5
ENST00000441556.5
ENST00000487820.1
CDS CAA 72 bp GACAGTGCTTGGGTCACAGTATTCCGAGCTAGTTGTTaGGCCACTAGGTTGTCACGACTTGTAGGCGAGACA +
Preference number: 6 (lower is better)
Translates to: DSAWVTVFRASC*ATRLSRLVGET
Trigger: TGTCTCGCCTACAAGTCGTGACAACCTAGTGGCCAAACAACTAGCTCGGAATACTGTGACCCAAGCACTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS CAA 90 bp GTTGGATCTGGTGTTGAGCCAGTGCTTGGTCCATTTTCCTCAATTTaGTTTGCACTTGGAGGTGGGAAAGCGGGTACAGAAGCGCCAATC +
Preference number: 6 (lower is better)
Translates to: VGSGVEPVLGPFSSI*FALGGGKAGTEAPI
Trigger: GATTGGCGCTTCTGTACCCGCTTTCCCACCTCCAAGTGCAAACAAAATTGAGGAAAATGGACCAAGCACTGGCTCAACACCAGATCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS TCA 72 bp CGGACATCCTTTCTTGCATTTTCTTGCAGTGGGCCATaGCTGCTTCAAGGATGGAGAGGGGGTTGGTACAAA +
Preference number: 6 (lower is better)
Translates to: RTSFLAFSCSGP*LLQGWRGGWYK
Trigger: TTTGTACCAACCCCCTCTCCATCCTTGAAGCAGTCATGGCCCACTGCAAGAAAATGCAAGAAAGGATGTCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000160373.8
ENST00000412853.1
ENST00000434890.5
ENST00000441556.5
ENST00000454375.5
CDS TCA 72 bp GCCAGCTTCTTGTGCTCTTGCTCAAGGGCTTGTAGCTaGAGCTTCTCCATTTCCAGCTTCTTTTGTCTGCTC +
Preference number: 6 (lower is better)
Translates to: ASFLCSCSRACS*SFSISSFFCLL
Trigger: GAGCAGACAAAAGAAGCTGGAAATGGAGAAGCTTCAGCTACAAGCCCTTGAGCAAGAGCACAAGAAGCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000160373.8
ENST00000434890.5
ENST00000441556.5
ENST00000454375.5
CDS GCA 72 bp CATCCTTTCTTGCATTTTCTTGCAGTGGGCCATGACTaGTTCAAGGATGGAGAGGGGGTTGGTACAAACTGG +
Preference number: 6 (lower is better)
Translates to: HPFLHFLAVGHD*FKDGEGVGTNW
Trigger: CCAGTTTGTACCAACCCCCTCTCCATCCTTGAAGCAGTCATGGCCCACTGCAAGAAAATGCAAGAAAGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000160373.8
ENST00000412853.1
ENST00000434890.5
ENST00000441556.5
ENST00000454375.5
CDS CAA 72 bp GTCACAGTATTCCGAGCTAGTTGTTTGGCCACTAGGTaGTCACGACTTGTAGGCGAGACATCTCTTGACGGA +
Preference number: 6 (lower is better)
Translates to: VTVFRASCLATR*SRLVGETSLDG
Trigger: TCCGTCAAGAGATGTCTCGCCTACAAGTCGTGACAACCTAGTGGCCAAACAACTAGCTCGGAATACTGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS CAA 90 bp CAGTTCCTTCTGTTCCCACAGATATGGAAACCAAACGCCTATCTTTaGTCTTCCGTGGAAGAGAGAGGCTTGGTTTGCTGTCACTTCCCC +
Preference number: 6 (lower is better)
Translates to: QFLLFPQIWKPNAYL*SSVEERGLVCCHFP
Trigger: GGGGAAGTGACAGCAAACCAAGCCTCTCTCTTCCACGGAAGACAAAAGATAGGCGTTTGGTTTCCATATCTGTGGGAACAGAAGGAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS CAA 90 bp GGTCAGCATTTTCTGTCACTAGGTCTGTCTGGCATGCAACAGACCTaGTCACAGTTCCTTCTGTTCCCACAGATATGGAAACCAAACGCC +
Preference number: 6 (lower is better)
Translates to: GQHFLSLGLSGMQQT*SQFLLFPQIWKPNA
Trigger: GGCGTTTGGTTTCCATATCTGTGGGAACAGAAGGAACTGTGACAAGGTCTGTTGCATGCCAGACAGACCTAGTGACAGAAAATGCTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS CAA 90 bp GTGTTGAGCCAGTGCTTGGTCCATTTTCCTCAATTTTGTTTGCACTaGGAGGTGGGAAAGCGGGTACAGAAGCGCCAATCAAGTCACCAT +
Preference number: 6 (lower is better)
Translates to: VLSQCLVHFPQFCLH*EVGKRVQKRQSSHH
Trigger: ATGGTGACTTGATTGGCGCTTCTGTACCCGCTTTCCCACCTCCAAGTGCAAACAAAATTGAGGAAAATGGACCAAGCACTGGCTCAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS CAA 90 bp GATCTGGTGTTGAGCCAGTGCTTGGTCCATTTTCCTCAATTTTGTTaGCACTTGGAGGTGGGAAAGCGGGTACAGAAGCGCCAATCAAGT +
Preference number: 6 (lower is better)
Translates to: DLVLSQCLVHFPQFC*HLEVGKRVQKRQSS
Trigger: ACTTGATTGGCGCTTCTGTACCCGCTTTCCCACCTCCAAGTGCAAACAAAATTGAGGAAAATGGACCAAGCACTGGCTCAACACCAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS CAA 90 bp TGTGGCAAACTGGAAGGAGTCGAAGCCACAGTTTTGTTATCAACTTaGGCCCCTGTGTTCGAGGCCCTGCTGCTGTCTATAATAACCTTG +
Preference number: 6 (lower is better)
Translates to: CGKLEGVEATVLLST*APVFEALLLSIITL
Trigger: CAAGGTTATTATAGACAGCAGCAGGGCCTCGAACACAGGGGCCAAAGTTGATAACAAAACTGTGGCTTCGACTCCTTCCAGTTTGCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS TCA 72 bp GCCACAGTTAAATCTATGGATGGTTTTGGTGGCAGCTaGGGGGAGGATGACTTAGGAAGGTTCTCCTCATTG +
Preference number: 6 (lower is better)
Translates to: ATVKSMDGFGGS*GEDDLGRFSSL
Trigger: CAATGAGGAGAACCTTCCTAAGTCATCCTCCCCTCAGCTGCCACCAAAACCATCCATAGATTTAACTGTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS TCA 72 bp CATTTTACCTCTCTCTGTTCAGTTTCCCCATCAGCCTaGGGTAGTTCTGCATCATCTGGAGAGGGATCATGG +
Preference number: 6 (lower is better)
Translates to: HFTSLCSVSPSA*GSSASSGEGSW
Trigger: CCATGATCCCTCTCCAGATGATGCAGAACTACCTCAGGCTGATGGGGAAACTGAACAGAGAGAGGTAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416239.1
ENST00000482124.1
CDS CCA 72 bp CGACTTGTAGGCGAGACATCTCTTGACGGAGGACTTTaGGTAGTATTTCCATTTTGGTCTGGGTCGTTAGCA +
Preference number: 6 (lower is better)
Translates to: RLVGETSLDGGL*VVFPFWSGSLA
Trigger: TGCTAACGACCCAGACCAAAATGGAAATACTACCCAAAGTCCTCCGTCAAGAGATGTCTCGCCTACAAGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS CCA 72 bp AGGAAGGTTCTCCTCATTGATCACCCTGTTCCCTTGTaGCAAACTGGAAGGAGTCGAAGCCACAGTTTTGTT +
Preference number: 6 (lower is better)
Translates to: RKVLLIDHPVPL*QTGRSRSHSFV
Trigger: AACAAAACTGTGGCTTCGACTCCTTCCAGTTTGCCACAAGGGAACAGGGTGATCAATGAGGAGAACCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS CAA 72 bp CTTAGGAAGGTTCTCCTCATTGATCACCCTGTTCCCTaGTGGCAAACTGGAAGGAGTCGAAGCCACAGTTTT +
Preference number: 6 (lower is better)
Translates to: LRKVLLIDHPVP*WQTGRSRSHSF
Trigger: AAAACTGTGGCTTCGACTCCTTCCAGTTTGCCACAAGGGAACAGGGTGATCAATGAGGAGAACCTTCCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000160373.8
ENST00000441556.5
ENST00000446636.5
CDS CAA 90 bp CAGCTTGGCACGAAGCTGTTCCCGCTCAGTGTCAAACTCAGAGAGTaGTTTTTCCATCTGAGCTTCCATTTCTGTGCTTCTTCGTTTCTC +
Preference number: 6 (lower is better)
Translates to: QLGTKLFPLSVKLRE*FFHLSFHFCASSFL
Trigger: GAGAAACGAAGAAGCACAGAAATGGAAGCTCAGATGGAAAAACAACTCTCTGAGTTTGACACTGAGCGGGAACAGCTTCGTGCCAAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS CAA 90 bp GTAAATCTTGACAGTGCTTGGGTCACAGTATTCCGAGCTAGTTGTTaGGCCACTAGGTTGTCACGACTTGTAGGCGAGACATCTCTTGAC +
Preference number: 6 (lower is better)
Translates to: VNLDSAWVTVFRASC*ATRLSRLVGETSLD
Trigger: GTCAAGAGATGTCTCGCCTACAAGTCGTGACAACCTAGTGGCCAAACAACTAGCTCGGAATACTGTGACCCAAGCACTGTCAAGATTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS GCA 72 bp ATCTACTTCAGCTCTCACTATTTCACAGGAGAATCCTaGAGCCATTTGTCTGTGCAGCCTGAGGTAGTTCTG +
Preference number: 6 (lower is better)
Translates to: IYFSSHYFTGES*SHLSVQPEVVL
Trigger: CAGAACTACCTCAGGCTGCACAGACAAATGGCTGCAGGATTCTCCTGTGAAATAGTGAGAGCTGAAGTAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435233.5
CDS GCA 72 bp TTGCACTTGTCTCTCCTTTCTGGCTCAAGCCCTCCGTaGCTACACAAGATTTCTAGGCAGTTCTATAAAGAC +
Preference number: 6 (lower is better)
Translates to: LHLSLLSGSSPP*LHKISRQFYKD
Trigger: GTCTTTATAGAACTGCCTAGAAATCTTGTGTAGGCACGGAGGGCTTGAGCCAGAAAGGAGAGACAAGTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467088.1
CDS CAA 72 bp CTGTTCCCACAGATATGGAAACCAAACGCCTATCTTTaGTCTTCCGTGGAAGAGAGAGGCTTGGTTTGCTGT +
Preference number: 6 (lower is better)
Translates to: LFPQIWKPNAYL*SSVEERGLVCC
Trigger: ACAGCAAACCAAGCCTCTCTCTTCCACGGAAGACAAAAGATAGGCGTTTGGTTTCCATATCTGTGGGAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS CAA 72 bp GTGTGCTACTGGTTGGATCTGGTGTTGAGCCAGTGCTaGGTCCATTTTCCTCAATTTTGTTTGCACTTGGAG +
Preference number: 6 (lower is better)
Translates to: VCYWLDLVLSQC*VHFPQFCLHLE
Trigger: CTCCAAGTGCAAACAAAATTGAGGAAAATGGACCAAGCACTGGCTCAACACCAGATCCAACCAGTAGCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS GCA 72 bp AATCTAGCTGCTTGGATTCGTGGGTTTAGACCTGGATaGAAAGAGGTGTTGGCACATGGTGAATGTAAACTG +
Preference number: 6 (lower is better)
Translates to: NLAAWIRGFRPG*KEVLAHGECKL
Trigger: CAGTTTACATTCACCATGTGCCAACACCTCTTTGCATCCAGGTCTAAACCCACGAATCCAAGCAGCTAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS GCA 72 bp CTGTATGCTGGTCTAGCTTTCACTGTCACTTGGGCATaGCCAGGAACTACAGGACAAGACAGGAAATATTTT +
Preference number: 6 (lower is better)
Translates to: LYAGLAFTVTWA*PGTTGQDRKYF
Trigger: AAAATATTTCCTGTCTTGTCCTGTAGTTCCTGGGCATGCCCAAGTGACAGTGAAAGCTAGACCAGCATACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445366.1
CDS CCA 72 bp TTCATGTGGTCAGCATTTTCTGTCACTAGGTCTGTCTaGCATGCAACAGACCTTGTCACAGTTCCTTCTGTT +
Preference number: 6 (lower is better)
Translates to: FMWSAFSVTRSV*HATDLVTVPSV
Trigger: AACAGAAGGAACTGTGACAAGGTCTGTTGCATGCCAGACAGACCTAGTGACAGAAAATGCTGACCACATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS CAA 72 bp ACGAAGCTGTTCCCGCTCAGTGTCAAACTCAGAGAGTaGTTTTTCCATCTGAGCTTCCATTTCTGTGCTTCT +
Preference number: 6 (lower is better)
Translates to: TKLFPLSVKLRE*FFHLSFHFCAS
Trigger: AGAAGCACAGAAATGGAAGCTCAGATGGAAAAACAACTCTCTGAGTTTGACACTGAGCGGGAACAGCTTCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS CAA 72 bp TTTCTGTCACTAGGTCTGTCTGGCATGCAACAGACCTaGTCACAGTTCCTTCTGTTCCCACAGATATGGAAA +
Preference number: 6 (lower is better)
Translates to: FLSLGLSGMQQT*SQFLLFPQIWK
Trigger: TTTCCATATCTGTGGGAACAGAAGGAACTGTGACAAGGTCTGTTGCATGCCAGACAGACCTAGTGACAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000160373.8
ENST00000441556.5
CDS CAA 72 bp ACAATCCTGGCTTCATCACTTGCTAGATGCATGACTTaGAGCATTTTACCTCTCTCTGTTCAGTTTCCCCAT +
Preference number: 6 (lower is better)
Translates to: TILASSLARCMT*SILPLSVQFPH
Trigger: ATGGGGAAACTGAACAGAGAGAGGTAAAATGCTCAAAGTCATGCATCTAGCAAGTGATGAAGCCAGGATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416239.1
ENST00000482124.1
CDS TCA 72 bp AGTTTTTCAGCACCGGCAGCTGCCACAAGTAAGCTTTaGATGTGCTTAATCAATGAACTAAGAATCAGGTTA +
Preference number: 6 (lower is better)
Translates to: SFSAPAAATSKL*MCLINELRIRL
Trigger: TAACCTGATTCTTAGTTCATTGATTAAGCACATTCAAAGCTTACTTGTGGCAGCTGCCGGTGCTGAAAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467088.1