RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CTSV (Homo sapiens)

Ensembl gene IDs: ENSG00000136943

Ensembl transcript IDs: ENST00000259470.6, ENST00000479932.2, ENST00000538255.6, ENST00000679551.1, ENST00000679661.1, ENST00000680159.1, ENST00000680221.1, ENST00000680385.1, ENST00000680435.1, ENST00000680490.1, ENST00000680787.1, ENST00000681330.1, ENST00000681517.1, ENST00000681737.1, ENST00000681927.1

Found 620 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGGACATAGGCTATCAAAGGGTTTTTGGGATACACAGTCCCACATaGCCCTTCCCTCCCATTGCATTCACAATGGATCACCTTTCGATT +
Preference number: 1 (lower is better)
Translates to: VDIGYQRVFGIHSPT*PFPPIAFTMDHLSI
Trigger: AATCGAAAGGTGATCCATTGTGAATGCAATGGGAGGGAAGGGGCATGTGGGACTGTGTATCCCAAAAACCCTTTGATAGCCTATGTCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR GCA 90 bp ATTCCTTCCCAAACGAAACAAAGGCATGGGGTCTGGCTAGTTATCTaGAGCAGGAACATGTCCTTAAGGCACAGATCGCTCATGCTATTG +
Preference number: 1 (lower is better)
Translates to: IPSQTKQRHGVWLVI*SRNMSLRHRSLMLL
Trigger: CAATAGCATGAGCGATCTGTGCCTTAAGGACATGTTCCTGCTGCAGATAACTAGCCAGACCCCATGCCTTTGTTTCGTTTGGGAAGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR GCA 90 bp CCTGGGTTGTTGTTCCAAGAATCTGTGGAGAGTACCAACTTAGCCTaGTGCTGCAAAGACGAAGGAATCCTTTCTCAGAGAAAACTCAAG +
Preference number: 1 (lower is better)
Translates to: PGLLFQESVESTNLA*CCKDEGILSQRKLK
Trigger: CTTGAGTTTTCTCTGAGAAAGGATTCCTTCGTCTTTGCAGCAGCAGGCTAAGTTGGTACTCTCCACAGATTCTTGGAACAACAACCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR GCA 90 bp GGGTTGTTGTTCCAAGAATCTGTGGAGAGTACCAACTTAGCCTGCTaGTGCAAAGACGAAGGAATCCTTTCTCAGAGAAAACTCAAGACT +
Preference number: 1 (lower is better)
Translates to: GLLFQESVESTNLAC*CKDEGILSQRKLKT
Trigger: AGTCTTGAGTTTTCTCTGAGAAAGGATTCCTTCGTCTTTGCAGCAGCAGGCTAAGTTGGTACTCTCCACAGATTCTTGGAACAACAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR CCA 90 bp ATCACTCTTTCATTCAATTTAGTGCCTAGATGTTTCCTTAGAGCCTaGGTTGTTGTTCCAAGAATCTGTGGAGAGTACCAACTTAGCCTG +
Preference number: 1 (lower is better)
Translates to: ITLSFNLVPRCFLRA*VVVPRICGEYQLSL
Trigger: CAGGCTAAGTTGGTACTCTCCACAGATTCTTGGAACAACAACCCAGGCTCTAAGGAAACATCTAGGCACTAAATTGAATGAAAGAGTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR GCA 90 bp TGTCATAACTACACTCCCACATCAGCAAACTCCTCCCTCTTAATATaGTCAGTGATTTCTATCTCACCCTTCCTTACTTCCTTTGCAATT +
Preference number: 1 (lower is better)
Translates to: CHNYTPTSANSSLLI*SVISISPFLTSFAI
Trigger: AATTGCAAAGGAAGTAAGGAAGGGTGAGATAGAAATCACTGAGCATATTAAGAGGGAGGAGTTTGCTGATGTGGGAGTGTAGTTATGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR GCA 90 bp GCCGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCTCTCATTCCGGTAAACATACACAGTCCCACATaGCCCTTCCCTCCCATTGCA +
Preference number: 2 (lower is better)
Translates to: AVFPPWVVQVFLALIPVNIHSPT*PFPPIA
Trigger: TGCAATGGGAGGGAAGGGGCATGTGGGACTGTGTAT...GTTTACCGGAATGAGAGCAAGGAACACCTGGACCACCCAGGGCGGGAAAACGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR TCA 90 bp GCCGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCTCTCATTCCGGTAAACGCCTGGCCAAGATGGTaGAACCCTCTCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: AVFPPWVVQVFLALIPVNAWPRW*NPLSTK
Trigger: TTTAGTAGAGAGAGGGTTTCACCATCTTGGCCAGGC...GTTTACCGGAATGAGAGCAAGGAACACCTGGACCACCCAGGGCGGGAAAACGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CCA 90 bp GCCGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCTCTCATTCCGGTAAACAACTGGAAGGACGAATaGCCTGCATCCATAGCAACG +
Preference number: 2 (lower is better)
Translates to: AVFPPWVVQVFLALIPVNNWKDE*PASIAT
Trigger: CGTTGCTATGGATGCAGGCCATTCGTCCTTCCAGTT...GTTTACCGGAATGAGAGCAAGGAACACCTGGACCACCCAGGGCGGGAAAACGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680385.1
3UTR-3UTR TCA 90 bp CCTGCGTCTTCCTCAGACTGCAAAGTGGTCACCAGCAATTCAGAGAGGCTCCAGGCCTTGGTGACAGAGTaGGAGAGACTCCGTCTCATA +
Preference number: 2 (lower is better)
Translates to: PASSSDCKVVTSNSERLQALVTE*ERLRLI
Trigger: TATGAGACGGAGTCTCTCTCACTCTGTCACCAAGGC...CTGGAGCCTCTCTGAATTGCTGGTGACCACTTTGCAGTCTGAGGAAGACGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR GCA 90 bp CGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCTCTCATTCCGGTAAACCTCCCCTTCCCTCCCATTaGATTCACAATGGATCACCT +
Preference number: 2 (lower is better)
Translates to: RFPALGGPGVPCSHSGKPPLPSH*IHNGSP
Trigger: AGGTGATCCATTGTGAATGCAATGGGAGGGAAGGGG...AGGTTTACCGGAATGAGAGCAAGGAACACCTGGACCACCCAGGGCGGGAAAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CCA 90 bp GCCGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCTCTCATTCCGGTAAACCCTCAGACTGCAAAGTaGTCACCAGCAATTCAGAGA +
Preference number: 2 (lower is better)
Translates to: AVFPPWVVQVFLALIPVNPQTAK*SPAIQR
Trigger: TCTCTGAATTGCTGGTGACCACTTTGCAGTCTGAGG...GTTTACCGGAATGAGAGCAAGGAACACCTGGACCACCCAGGGCGGGAAAACGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR TCA 90 bp GCCGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCTCTCATTCCGGTAAACCTGACCTTTCACTTGTaGTCTCTTATCCATCTTCGG +
Preference number: 2 (lower is better)
Translates to: AVFPPWVVQVFLALIPVNLTFHL*SLIHLR
Trigger: CCGAAGATGGATAAGAGATCACAAGTGAAAGGTCAG...GTTTACCGGAATGAGAGCAAGGAACACCTGGACCACCCAGGGCGGGAAAACGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR GCA 90 bp CGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCTCTCATTCCGGTAAACCTACCAACTTAGCCTGCTaGTGCAAAGACGAAGGAATC +
Preference number: 2 (lower is better)
Translates to: RFPALGGPGVPCSHSGKPTNLAC*CKDEGI
Trigger: GATTCCTTCGTCTTTGCAGCAGCAGGCTAAGTTGGT...AGGTTTACCGGAATGAGAGCAAGGAACACCTGGACCACCCAGGGCGGGAAAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CCA 90 bp TTAGGAACGCCTTTAAGCCGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCCCTCAGACTGCAAAGTaGTCACCAGCAATTCAGAGA +
Preference number: 2 (lower is better)
Translates to: LGTPLSRFPALGGPGVPCPQTAK*SPAIQR
Trigger: TCTCTGAATTGCTGGTGACCACTTTGCAGTCTGAGG...GCAAGGAACACCTGGACCACCCAGGGCGGGAAAACGGCTTAAAGGCGTTCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CCA 90 bp CGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCTCTCATTCCGGTAAACCTGGTAGATTCAGGAGTTaGGTAACACACAGTAACTGG +
Preference number: 2 (lower is better)
Translates to: RFPALGGPGVPCSHSGKPGRFRS*VTHSNW
Trigger: CCAGTTACTGTGTGTTACCCAACTCCTGAATCTACC...AGGTTTACCGGAATGAGAGCAAGGAACACCTGGACCACCCAGGGCGGGAAAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CCA 90 bp GCCGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCTCTCATTCCGGTAAACCTATCAAAGGGTTTTTaGGATACACAGTCCCACATG +
Preference number: 2 (lower is better)
Translates to: AVFPPWVVQVFLALIPVNLSKGF*DTQSHM
Trigger: CATGTGGGACTGTGTATCCCAAAAACCCTTTGATAG...GTTTACCGGAATGAGAGCAAGGAACACCTGGACCACCCAGGGCGGGAAAACGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR TCA 90 bp GAGTCTGGCCTAGTGACTTCTGACCTTTCACTTGTGATCTCTTATCCATCTTCGGCACTCCAGCCTTGGTaGCAGAGTGAGAGAGACTCC +
Preference number: 2 (lower is better)
Translates to: ESGLVTSDLSLVISYPSSALQPW*QSERDS
Trigger: GGAGTCTCTCTCACTCTGTCACCAAGGCTGGAGTGC...CGAAGATGGATAAGAGATCACAAGTGAAAGGTCAGAAGTCACTAGGCCAGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR TCA 90 bp CGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCTCTCATTCCGGTAAACCTATCTCTTGTGGACCTTaGACAAATTTCTCCAGCTAC +
Preference number: 2 (lower is better)
Translates to: RFPALGGPGVPCSHSGKPISCGP*TNFSSY
Trigger: GTAGCTGGAGAAATTTGTTCAAGGTCCACAAGAGAT...AGGTTTACCGGAATGAGAGCAAGGAACACCTGGACCACCCAGGGCGGGAAAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CCA 90 bp GCCGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCTCTCATTCCGGTAAACGTAACACACAGTAACTaGGCAGCTGATATAAAGTCT +
Preference number: 2 (lower is better)
Translates to: AVFPPWVVQVFLALIPVNVTHSN*AADIKS
Trigger: AGACTTTATATCAGCTGCCCAGTTACTGTGTGTTAC...GTTTACCGGAATGAGAGCAAGGAACACCTGGACCACCCAGGGCGGGAAAACGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR TCA 90 bp TACACAGTCCCACATGCCCCTTCCCTCCCATTGCATTCACAATGGATCACCTTTGACCCCAGCTGTTTTTaGCGAGCCAATACTTGCTGT +
Preference number: 2 (lower is better)
Translates to: YTVPHAPSLPLHSQWITFDPSCF*RANTCC
Trigger: ACAGCAAGTATTGGCTCGTCAAAAACAGCTGGGGTC...AAAGGTGATCCATTGTGAATGCAATGGGAGGGAAGGGGCATGTGGGACTGTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680385.1
3UTR-3UTR GCA 90 bp TACACAGTCCCACATGCCCCTTCCCTCCCATTGCATTCACAATGGATCACCTTTGCGTCTTCCTCAGACTaGAAAGTGGTCACCAGCAAT +
Preference number: 2 (lower is better)
Translates to: YTVPHAPSLPLHSQWITFASSSD*KVVTSN
Trigger: ATTGCTGGTGACCACTTTGCAGTCTGAGGAAGACGC...AAAGGTGATCCATTGTGAATGCAATGGGAGGGAAGGGGCATGTGGGACTGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR TCA 90 bp GAGTCTGGCCTAGTGACTTCTGACCTTTCACTTGTGATCTCTTATCCATCTTCGGCCTTGGTGACAGAGTaGGAGAGACTCCGTCTCATA +
Preference number: 2 (lower is better)
Translates to: ESGLVTSDLSLVISYPSSALVTE*ERLRLI
Trigger: TATGAGACGGAGTCTCTCTCACTCTGTCACCAAGGC...CGAAGATGGATAAGAGATCACAAGTGAAAGGTCAGAAGTCACTAGGCCAGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR TCA 90 bp GATGTTTCCTTAGAGCCTGGGTTGTTGTTCCAAGAATCTGTGGAGAGTACCAACGCCTTGGTGACAGAGTaGGAGAGACTCCGTCTCATA +
Preference number: 2 (lower is better)
Translates to: DVSLEPGLLFQESVESTNALVTE*ERLRLI
Trigger: TATGAGACGGAGTCTCTCTCACTCTGTCACCAAGGC...GTTGGTACTCTCCACAGATTCTTGGAACAACAACCCAGGCTCTAAGGAAACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR TCA 90 bp GATGTTTCCTTAGAGCCTGGGTTGTTGTTCCAAGAATCTGTGGAGAGTACCAACAGGCAGAGGTTGCAGTaGGCTGAGATCACACTACTG +
Preference number: 2 (lower is better)
Translates to: DVSLEPGLLFQESVESTNRQRLQ*AEITLL
Trigger: CAGTAGTGTGATCTCAGCTCACTGCAACCTCTGCCT...GTTGGTACTCTCCACAGATTCTTGGAACAACAACCCAGGCTCTAAGGAAACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR TCA 90 bp CCAGATTTGGGGGCATATCCCCAGCAAATATTGGTTAAGTCTGTGCTTCAGACTAGGCAGAGGTTGCAGTaGGCTGAGATCACACTACTG +
Preference number: 2 (lower is better)
Translates to: PDLGAYPQQILVKSVLQTRQRLQ*AEITLL
Trigger: CAGTAGTGTGATCTCAGCTCACTGCAACCTCTGCCT...AGTCTGAAGCACAGACTTAACCAATATTTGCTGGGGATATGCCCCCAAATCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR TCA 90 bp TTAGGAACGCCTTTAAGCCGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCATCAGAGACTTGGAATaGAAACAAAATACCCTTGGT +
Preference number: 2 (lower is better)
Translates to: LGTPLSRFPALGGPGVPCIRDLE*KQNTLG
Trigger: ACCAAGGGTATTTTGTTTTCATTCCAAGTCTCTGAT...GCAAGGAACACCTGGACCACCCAGGGCGGGAAAACGGCTTAAAGGCGTTCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR GCA 90 bp TCCTTAGAGCCTGGGTTGTTGTTCCAAGAATCTGTGGAGAGTACCAACTTAGCCCTGAGATCACACTACTaGACTCCAGCCTTGGTGACA +
Preference number: 2 (lower is better)
Translates to: SLEPGLLFQESVESTNLALRSHY*TPALVT
Trigger: TGTCACCAAGGCTGGAGTGCAGTAGTGTGATCTCAG...GGCTAAGTTGGTACTCTCCACAGATTCTTGGAACAACAACCCAGGCTCTAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR GCA 90 bp TCTGACCTTTCACTTGTGATCTCTTATCCATCTTCGGCCAGAGGCCTCTTTTTGGCTGAGGCAGAGAATTaGTTAAACCCGGGAGGCAGA +
Preference number: 2 (lower is better)
Translates to: SDLSLVISYPSSARGLFLAEAEN*LNPGGR
Trigger: TCTGCCTCCCGGGTTTAAGCAATTCTCTGCCTCAGC...CAAAAAGAGGCCTCTGGCCGAAGATGGATAAGAGATCACAAGTGAAAGGTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR GCA 90 bp GGACCCCAGCTGTTTTTGACGAGCCAATACTTGCTGTTATTCGAATTTGCTCCTGCTGAGGCAGAGAATTaGTTAAACCCGGGAGGCAGA +
Preference number: 2 (lower is better)
Translates to: GPQLFLTSQYLLLFEFAPAEAEN*LNPGGR
Trigger: TCTGCCTCCCGGGTTTAAGCAATTCTCTGCCTCAGC...AGGAGCAAATTCGAATAACAGCAAGTATTGGCTCGTCAAAAACAGCTGGGGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680385.1
3UTR-3UTR GCA 90 bp CCAGATTTGGGGGCATATCCCCAGCAAATATTGGTTAAGTCTGTGCTTCAGACTATACACAGTCCCACATaGCCCTTCCCTCCCATTGCA +
Preference number: 2 (lower is better)
Translates to: PDLGAYPQQILVKSVLQTIHSPT*PFPPIA
Trigger: TGCAATGGGAGGGAAGGGGCATGTGGGACTGTGTAT...AGTCTGAAGCACAGACTTAACCAATATTTGCTGGGGATATGCCCCCAAATCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR GCA 90 bp CAGCTTGGTCATGGAGACCCTAACCCAGAGGCGCTAGAGAAATTAAAGACACACAGTACCAACTTAGCCTaGTGCTGCAAAGACGAAGGA +
Preference number: 2 (lower is better)
Translates to: QLGHGDPNPEALEKLKTHSTNLA*CCKDEG
Trigger: TCCTTCGTCTTTGCAGCAGCAGGCTAAGTTGGTACT...GTGTGTCTTTAATTTCTCTAGCGCCTCTGGGTTAGGGTCTCCATGACCAAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR GCA 90 bp GGACCCCAGCTGTTTTTGACGAGCCAATACTTGCTGTTATTCGAATTTGCTCCTCATTGCAGCCCTGATTaGCTTGAGGACGCGAACAGT +
Preference number: 2 (lower is better)
Translates to: GPQLFLTSQYLLLFEFAPHCSPD*LEDANS
Trigger: ACTGTTCGCGTCCTCAAGGCAATCAGGGCTGCAATG...AGGAGCAAATTCGAATAACAGCAAGTATTGGCTCGTCAAAAACAGCTGGGGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680787.1
3UTR-3UTR TCA 90 bp AACAAAATACCCTTGGTAACTTACTTGCACCTGCGTCTTCCTCAGACTGCAAAGGCCTTGGTGACAGAGTaGGAGAGACTCCGTCTCATA +
Preference number: 2 (lower is better)
Translates to: NKIPLVTYLHLRLPQTAKALVTE*ERLRLI
Trigger: TATGAGACGGAGTCTCTCTCACTCTGTCACCAAGGC...CTTTGCAGTCTGAGGAAGACGCAGGTGCAAGTAAGTTACCAAGGGTATTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR TCA 90 bp CCAGATTTGGGGGCATATCCCCAGCAAATATTGGTTAAGTCTGTGCTTCAGACTGCCTGGCCAAGATGGTaGAACCCTCTCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: PDLGAYPQQILVKSVLQTAWPRW*NPLSTK
Trigger: TTTAGTAGAGAGAGGGTTTCACCATCTTGGCCAGGC...AGTCTGAAGCACAGACTTAACCAATATTTGCTGGGGATATGCCCCCAAATCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR TCA 90 bp TTGGGATACACAGTCCCACATGCCCCTTCCCTCCCATTGCATTCACAATGGATCCTACTGTCAAATGCCTaGGATTTGTTAACCACACCA +
Preference number: 2 (lower is better)
Translates to: LGYTVPHAPSLPLHSQWILLSNA*DLLTTP
Trigger: TGGTGTGGTTAACAAATCTCAGGCATTTGACAGTAG...GATCCATTGTGAATGCAATGGGAGGGAAGGGGCATGTGGGACTGTGTATCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR GCA 90 bp GAGTCTGGCCTAGTGACTTCTGACCTTTCACTTGTGATCTCTTATCCATCTTCGCTGAGATCACACTACTaGACTCCAGCCTTGGTGACA +
Preference number: 2 (lower is better)
Translates to: ESGLVTSDLSLVISYPSSLRSHY*TPALVT
Trigger: TGTCACCAAGGCTGGAGTGCAGTAGTGTGATCTCAG...CGAAGATGGATAAGAGATCACAAGTGAAAGGTCAGAAGTCACTAGGCCAGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR GCA 90 bp GCCCAGCCTCATCTCTTGTGGACCTTGAACAAATTTCTCCAGCTACTGTCAAATGCGTCTTCCTCAGACTaGAAAGTGGTCACCAGCAAT +
Preference number: 2 (lower is better)
Translates to: AQPHLLWTLNKFLQLLSNASSSD*KVVTSN
Trigger: ATTGCTGGTGACCACTTTGCAGTCTGAGGAAGACGC...ATTTGACAGTAGCTGGAGAAATTTGTTCAAGGTCCACAAGAGATGAGGCTGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR GCA 90 bp TTGGGATACACAGTCCCACATGCCCCTTCCCTCCCATTGCATTCACAATGGATCCCAGCTACTGTCAAATaGCTGAGATTTGTTAACCAC +
Preference number: 2 (lower is better)
Translates to: LGYTVPHAPSLPLHSQWIPATVK*LRFVNH
Trigger: GTGGTTAACAAATCTCAGGCATTTGACAGTAGCTGG...GATCCATTGTGAATGCAATGGGAGGGAAGGGGCATGTGGGACTGTGTATCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR GCA 90 bp CAGCTTGGTCATGGAGACCCTAACCCAGAGGCGCTAGAGAAATTAAAGACACACGGCTCTCCTTTAGCCTaGAGAATGTGGGTATATCTT +
Preference number: 2 (lower is better)
Translates to: QLGHGDPNPEALEKLKTHGSPLA*RMWVYL
Trigger: AAGATATACCCACATTCTGCAGGCTAAAGGAGAGCC...GTGTGTCTTTAATTTCTCTAGCGCCTCTGGGTTAGGGTCTCCATGACCAAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR GCA 90 bp CAGCTTGGTCATGGAGACCCTAACCCAGAGGCGCTAGAGAAATTAAAGACACACAACTTAGCCTGCTGCTaGAAAGACGAAGGAATCCTT +
Preference number: 2 (lower is better)
Translates to: QLGHGDPNPEALEKLKTHNLACC*KDEGIL
Trigger: AAGGATTCCTTCGTCTTTGCAGCAGCAGGCTAAGTT...GTGTGTCTTTAATTTCTCTAGCGCCTCTGGGTTAGGGTCTCCATGACCAAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CCA 90 bp AATTCTTCATTGGTCCAACCCATGTTCACCAAGCCGATTTGCGGGCAGAAATGGTTGCCTGGTAAGGTCTaGTGTCTAGAAGCTACTCTC +
Preference number: 2 (lower is better)
Translates to: NSSLVQPMFTKPICGQKWLPGKV*CLEATL
Trigger: GAGAGTAGCTTCTAGACACCAGACCTTACCAGGCAA...CCATTTCTGCCCGCAAATCGGCTTGGTGAACATGGGTTGGACCAATGAAGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680787.1
3UTR-3UTR TCA 90 bp AACAAAATACCCTTGGTAACTTACTTGCACCTGCGTCTTCCTCAGACTGCAAAGGCCTGGCCAAGATGGTaGAACCCTCTCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: NKIPLVTYLHLRLPQTAKAWPRW*NPLSTK
Trigger: TTTAGTAGAGAGAGGGTTTCACCATCTTGGCCAGGC...CTTTGCAGTCTGAGGAAGACGCAGGTGCAAGTAAGTTACCAAGGGTATTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR TCA 90 bp CAGCTTGGTCATGGAGACCCTAACCCAGAGGCGCTAGAGAAATTAAAGACACACATCTCTTGTGGACCTTaGACAAATTTCTCCAGCTAC +
Preference number: 2 (lower is better)
Translates to: QLGHGDPNPEALEKLKTHISCGP*TNFSSY
Trigger: GTAGCTGGAGAAATTTGTTCAAGGTCCACAAGAGAT...GTGTGTCTTTAATTTCTCTAGCGCCTCTGGGTTAGGGTCTCCATGACCAAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR TCA 90 bp TACACAGTCCCACATGCCCCTTCCCTCCCATTGCATTCACAATGGATCACCTTTATCTCTTGTGGACCTTaGACAAATTTCTCCAGCTAC +
Preference number: 2 (lower is better)
Translates to: YTVPHAPSLPLHSQWITFISCGP*TNFSSY
Trigger: GTAGCTGGAGAAATTTGTTCAAGGTCCACAAGAGAT...AAAGGTGATCCATTGTGAATGCAATGGGAGGGAAGGGGCATGTGGGACTGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR TCA 90 bp GGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTTCCTCCACCACCAGAACACCATaGTCCAGGTTTTTGCTGCTG +
Preference number: 2 (lower is better)
Translates to: GQFQDKISPDMLSLSPSSTTRTP*SRFLLL
Trigger: CAGCAGCAAAAACCTGGATCATGGTGTTCTGGTGGT...GGAGGAAGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000680385.1
ENST00000680787.1
3UTR-3UTR GCA 90 bp AACAAAATACCCTTGGTAACTTACTTGCACCTGCGTCTTCCTCAGACTGCAAAGGCGTCTTCCTCAGACTaGAAAGTGGTCACCAGCAAT +
Preference number: 2 (lower is better)
Translates to: NKIPLVTYLHLRLPQTAKASSSD*KVVTSN
Trigger: ATTGCTGGTGACCACTTTGCAGTCTGAGGAAGACGC...CTTTGCAGTCTGAGGAAGACGCAGGTGCAAGTAAGTTACCAAGGGTATTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR GCA 90 bp GGACCCCAGCTGTTTTTGACGAGCCAATACTTGCTGTTATTCGAATTTGCTCCTGTGCTGTTAGGTTATTaGCTGGTAAGGTCTGGTGTC +
Preference number: 2 (lower is better)
Translates to: GPQLFLTSQYLLLFEFAPVLLGY*LVRSGV
Trigger: GACACCAGACCTTACCAGGCAATAACCTAACAGCAC...AGGAGCAAATTCGAATAACAGCAAGTATTGGCTCGTCAAAAACAGCTGGGGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680787.1
3UTR-3UTR GCA 90 bp TTCTGGACCCCAGCTGTTTTTGACGAGCCAATACTTGCTGTTATTCGAATTTGCGAAGGACGAATGGCCTaGATCCATAGCAACGGAGAT +
Preference number: 2 (lower is better)
Translates to: FWTPAVFDEPILAVIRICEGRMA*IHSNGD
Trigger: ATCTCCGTTGCTATGGATGCAGGCCATTCGTCCTTC...GCAAATTCGAATAACAGCAAGTATTGGCTCGTCAAAAACAGCTGGGGTCCAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680385.1
ENST00000680787.1
3UTR-3UTR GCA 90 bp CAGCTTGGTCATGGAGACCCTAACCCAGAGGCGCTAGAGAAATTAAAGACACACGATCCAGGTTTTTGCTaGTGCAGTCTGGTTCAAAAT +
Preference number: 2 (lower is better)
Translates to: QLGHGDPNPEALEKLKTHDPGFC*CSLVQN
Trigger: ATTTTGAACCAGACTGCAGCAGCAAAAACCTGGATC...GTGTGTCTTTAATTTCTCTAGCGCCTCTGGGTTAGGGTCTCCATGACCAAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680385.1
3UTR-3UTR CCA 90 bp GAGTCTGGCCTAGTGACTTCTGACCTTTCACTTGTGATCTCTTATCCATCTTCGCCTCAGACTGCAAAGTaGTCACCAGCAATTCAGAGA +
Preference number: 2 (lower is better)
Translates to: ESGLVTSDLSLVISYPSSPQTAK*SPAIQR
Trigger: TCTCTGAATTGCTGGTGACCACTTTGCAGTCTGAGG...CGAAGATGGATAAGAGATCACAAGTGAAAGGTCAGAAGTCACTAGGCCAGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CCA 90 bp GGACCCCAGCTGTTTTTGACGAGCCAATACTTGCTGTTATTCGAATTTGCTCCTTTCTCCTTGACATACTaGAAGGCCCTAGCCATGAAG +
Preference number: 2 (lower is better)
Translates to: GPQLFLTSQYLLLFEFAPFSLTY*KALAMK
Trigger: CTTCATGGCTAGGGCCTTCCAGTATGTCAAGGAGAA...AGGAGCAAATTCGAATAACAGCAAGTATTGGCTCGTCAAAAACAGCTGGGGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680787.1
3UTR-3UTR TCA 90 bp TCCTTAGAGCCTGGGTTGTTGTTCCAAGAATCTGTGGAGAGTACCAACTTAGCCCTACTGTCAAATGCCTaGGATTTGTTAACCACACCA +
Preference number: 2 (lower is better)
Translates to: SLEPGLLFQESVESTNLALLSNA*DLLTTP
Trigger: TGGTGTGGTTAACAAATCTCAGGCATTTGACAGTAG...GGCTAAGTTGGTACTCTCCACAGATTCTTGGAACAACAACCCAGGCTCTAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR TCA 90 bp CCAGATTTGGGGGCATATCCCCAGCAAATATTGGTTAAGTCTGTGCTTCAGACTCTGACCTTTCACTTGTaGTCTCTTATCCATCTTCGG +
Preference number: 2 (lower is better)
Translates to: PDLGAYPQQILVKSVLQTLTFHL*SLIHLR
Trigger: CCGAAGATGGATAAGAGATCACAAGTGAAAGGTCAG...AGTCTGAAGCACAGACTTAACCAATATTTGCTGGGGATATGCCCCCAAATCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR GCA 90 bp TCCTTAGAGCCTGGGTTGTTGTTCCAAGAATCTGTGGAGAGTACCAACTTAGCCCCAGCTACTGTCAAATaGCTGAGATTTGTTAACCAC +
Preference number: 2 (lower is better)
Translates to: SLEPGLLFQESVESTNLAPATVK*LRFVNH
Trigger: GTGGTTAACAAATCTCAGGCATTTGACAGTAGCTGG...GGCTAAGTTGGTACTCTCCACAGATTCTTGGAACAACAACCCAGGCTCTAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR GCA 90 bp CCAGATTTGGGGGCATATCCCCAGCAAATATTGGTTAAGTCTGTGCTTCAGACTAACTTAGCCTGCTGCTaGAAAGACGAAGGAATCCTT +
Preference number: 2 (lower is better)
Translates to: PDLGAYPQQILVKSVLQTNLACC*KDEGIL
Trigger: AAGGATTCCTTCGTCTTTGCAGCAGCAGGCTAAGTT...AGTCTGAAGCACAGACTTAACCAATATTTGCTGGGGATATGCCCCCAAATCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR GCA 90 bp CTTCATTGGTCCAACCCATGTTCACCAAGCCGATTTGCGGGCAGAAATGGAAGAGATATATGCCCATATTaGACCTATAATGGGTGCTGT +
Preference number: 2 (lower is better)
Translates to: LHWSNPCSPSRFAGRNGRDICPY*TYNGCC
Trigger: ACAGCACCCATTATAGGTGCAATATGGGCATATATC...TCTTCCATTTCTGCCCGCAAATCGGCTTGGTGAACATGGGTTGGACCAATGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680787.1
3UTR-3UTR GCA 90 bp GATCTCTCAGACTTAACAAAGAACCAGCAGAGGCAGATGTTTCTGCTTACTATTCATTGCAGCCCTGATTaGCTTGAGGACGCGAACAGT +
Preference number: 2 (lower is better)
Translates to: DLSDLTKNQQRQMFLLTIHCSPD*LEDANS
Trigger: ACTGTTCGCGTCCTCAAGGCAATCAGGGCTGCAATG...AATAGTAAGCAGAAACATCTGCCTCTGCTGGTTCTTTGTTAAGTCTGAGAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681330.1
3UTR-3UTR GCA 90 bp GATCTCTCAGACTTAACAAAGAACCAGCAGAGGCAGATGTTTCTGCTTACTATTCTTCTCCTTTCCAGGTaGGACCACTGTGAAGCCAGT +
Preference number: 2 (lower is better)
Translates to: DLSDLTKNQQRQMFLLTILLLSR*DHCEAS
Trigger: ACTGGCTTCACAGTGGTCGCACCTGGAAAGGAGAAG...AATAGTAAGCAGAAACATCTGCCTCTGCTGGTTCTTTGTTAAGTCTGAGAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681330.1
3UTR-3UTR GCA 90 bp GATGTTTCCTTAGAGCCTGGGTTGTTGTTCCAAGAATCTGTGGAGAGTACCAACGCTGTTATTCGAATTTaGTCCTTCAAAGCCGTAGCC +
Preference number: 2 (lower is better)
Translates to: DVSLEPGLLFQESVESTNAVIRI*SFKAVA
Trigger: GGCTACGGCTTTGAAGGAGCAAATTCGAATAACAGC...GTTGGTACTCTCCACAGATTCTTGGAACAACAACCCAGGCTCTAAGGAAACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680385.1
3UTR-3UTR CCA 90 bp TCTGACCTTTCACTTGTGATCTCTTATCCATCTTCGGCCAGAGGCCTCTTTTTGGGTAGATTCAGGAGTTaGGTAACACACAGTAACTGG +
Preference number: 2 (lower is better)
Translates to: SDLSLVISYPSSARGLFLGRFRS*VTHSNW
Trigger: CCAGTTACTGTGTGTTACCCAACTCCTGAATCTACC...CAAAAAGAGGCCTCTGGCCGAAGATGGATAAGAGATCACAAGTGAAAGGTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR TCA 90 bp TGCAAAGACGAAGGAATCCTTTCTCAGAGAAAACTCAAGACTGAATATGGTAGAAGGCAGAGGTTGCAGTaGGCTGAGATCACACTACTG +
Preference number: 2 (lower is better)
Translates to: CKDEGILSQRKLKTEYGRRQRLQ*AEITLL
Trigger: CAGTAGTGTGATCTCAGCTCACTGCAACCTCTGCCT...TCTACCATATTCAGTCTTGAGTTTTCTCTGAGAAAGGATTCCTTCGTCTTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR TCA 90 bp TACACAGTCCCACATGCCCCTTCCCTCCCATTGCATTCACAATGGATCACCTTTATCAGAGACTTGGAATaGAAACAAAATACCCTTGGT +
Preference number: 2 (lower is better)
Translates to: YTVPHAPSLPLHSQWITFIRDLE*KQNTLG
Trigger: ACCAAGGGTATTTTGTTTTCATTCCAAGTCTCTGAT...AAAGGTGATCCATTGTGAATGCAATGGGAGGGAAGGGGCATGTGGGACTGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR TCA 90 bp CAGCTTGGTCATGGAGACCCTAACCCAGAGGCGCTAGAGAAATTAAAGACACACTTTACCCATGTTTATTaGCAGCAAGCCAGTGATAAA +
Preference number: 2 (lower is better)
Translates to: QLGHGDPNPEALEKLKTHFTHVY*QQASDK
Trigger: TTTATCACTGGCTTGCTGTCAATAAACATGGGTAAA...GTGTGTCTTTAATTTCTCTAGCGCCTCTGGGTTAGGGTCTCCATGACCAAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR TCA 90 bp GATCTCTCAGACTTAACAAAGAACCAGCAGAGGCAGATGTTTCTGCTTACTATTGAACCACACTGTTTCTaGTTCTTCACTGGCGTCACG +
Preference number: 2 (lower is better)
Translates to: DLSDLTKNQQRQMFLLTIEPHCF*FFTGVT
Trigger: CGTGACGCCAGTGAAGAATCAGAAACAGTGTGGTTC...AATAGTAAGCAGAAACATCTGCCTCTGCTGGTTCTTTGTTAAGTCTGAGAGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681330.1
3UTR-3UTR TCA 90 bp GGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTTCCTCCATTCTGCTCGCTCAGTaGGACAAGTTTCCCAGTTTT +
Preference number: 2 (lower is better)
Translates to: GQFQDKISPDMLSLSPSSILLAQ*DKFPSF
Trigger: AAAACTGGGAAACTTGTCTCACTGAGCGAGCAGAAT...GGAGGAAGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680787.1
3UTR-3UTR TCA 90 bp GATCTCTCAGACTTAACAAAGAACCAGCAGAGGCAGATGTTTCTGCTTACTATTACCACCAGAACACCATaGTCCAGGTTTTTGCTGCTG +
Preference number: 2 (lower is better)
Translates to: DLSDLTKNQQRQMFLLTITTRTP*SRFLLL
Trigger: CAGCAGCAAAAACCTGGATCATGGTGTTCTGGTGGT...AATAGTAAGCAGAAACATCTGCCTCTGCTGGTTCTTTGTTAAGTCTGAGAGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681330.1
3UTR-3UTR GCA 90 bp ACTAAAAGTATTCCTTCCCAAACGAAACAAAGGCATGGGGTCTGGCTAGTTATCACCAACTTAGCCTGCTaGTGCAAAGACGAAGGAATC +
Preference number: 2 (lower is better)
Translates to: TKSIPSQTKQRHGVWLVITNLAC*CKDEGI
Trigger: GATTCCTTCGTCTTTGCAGCAGCAGGCTAAGTTGGT...GATAACTAGCCAGACCCCATGCCTTTGTTTCGTTTGGGAAGGAATACTTTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR GCA 90 bp ACTAAAAGTATTCCTTCCCAAACGAAACAAAGGCATGGGGTCTGGCTAGTTATCAGTACCAACTTAGCCTaGTGCTGCAAAGACGAAGGA +
Preference number: 2 (lower is better)
Translates to: TKSIPSQTKQRHGVWLVISTNLA*CCKDEG
Trigger: TCCTTCGTCTTTGCAGCAGCAGGCTAAGTTGGTACT...GATAACTAGCCAGACCCCATGCCTTTGTTTCGTTTGGGAAGGAATACTTTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR GCA 90 bp GATCTCTCAGACTTAACAAAGAACCAGCAGAGGCAGATGTTTCTGCTTACTATTCAGTCCACCAGATTCTaGTCGCTCAGTGAGACAAGT +
Preference number: 2 (lower is better)
Translates to: DLSDLTKNQQRQMFLLTIQSTRF*SLSETS
Trigger: ACTTGTCTCACTGAGCGAGCAGAATCTGGTGGACTG...AATAGTAAGCAGAAACATCTGCCTCTGCTGGTTCTTTGTTAAGTCTGAGAGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681330.1
3UTR-3UTR GCA 90 bp GATCTCTCAGACTTAACAAAGAACCAGCAGAGGCAGATGTTTCTGCTTACTATTGAAGGACGAATGGCCTaGATCCATAGCAACGGAGAT +
Preference number: 2 (lower is better)
Translates to: DLSDLTKNQQRQMFLLTIEGRMA*IHSNGD
Trigger: ATCTCCGTTGCTATGGATGCAGGCCATTCGTCCTTC...AATAGTAAGCAGAAACATCTGCCTCTGCTGGTTCTTTGTTAAGTCTGAGAGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681330.1
3UTR-3UTR CCA 90 bp CCAGATTTGGGGGCATATCCCCAGCAAATATTGGTTAAGTCTGTGCTTCAGACTCAGCCTCATCTCTTGTaGACCTTGAACAAATTTCTC +
Preference number: 2 (lower is better)
Translates to: PDLGAYPQQILVKSVLQTQPHLL*TLNKFL
Trigger: GAGAAATTTGTTCAAGGTCCACAAGAGATGAGGCTG...AGTCTGAAGCACAGACTTAACCAATATTTGCTGGGGATATGCCCCCAAATCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CCA 90 bp CAGCTTGGTCATGGAGACCCTAACCCAGAGGCGCTAGAGAAATTAAAGACACACATTCACCCACAAGTTTaGTGTACTTTCTTCCAGTAT +
Preference number: 2 (lower is better)
Translates to: QLGHGDPNPEALEKLKTHIHPQV*CTFFQY
Trigger: ATACTGGAAGAAAGTACACCAAACTTGTGGGTGAAT...GTGTGTCTTTAATTTCTCTAGCGCCTCTGGGTTAGGGTCTCCATGACCAAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CCA 90 bp CCAGATTTGGGGGCATATCCCCAGCAAATATTGGTTAAGTCTGTGCTTCAGACTTGTTTCCTTAGAGCCTaGGTTGTTGTTCCAAGAATC +
Preference number: 2 (lower is better)
Translates to: PDLGAYPQQILVKSVLQTCFLRA*VVVPRI
Trigger: GATTCTTGGAACAACAACCCAGGCTCTAAGGAAACA...AGTCTGAAGCACAGACTTAACCAATATTTGCTGGGGATATGCCCCCAAATCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CCA 90 bp GATCTCTCAGACTTAACAAAGAACCAGCAGAGGCAGATGTTTCTGCTTACTATTAACTGGAAGGACGAATaGCCTGCATCCATAGCAACG +
Preference number: 2 (lower is better)
Translates to: DLSDLTKNQQRQMFLLTINWKDE*PASIAT
Trigger: CGTTGCTATGGATGCAGGCCATTCGTCCTTCCAGTT...AATAGTAAGCAGAAACATCTGCCTCTGCTGGTTCTTTGTTAAGTCTGAGAGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681330.1
3UTR-3UTR TCA 90 bp ACTAAAAGTATTCCTTCCCAAACGAAACAAAGGCATGGGGTCTGGCTAGTTATCCTGACCTTTCACTTGTaGTCTCTTATCCATCTTCGG +
Preference number: 2 (lower is better)
Translates to: TKSIPSQTKQRHGVWLVILTFHL*SLIHLR
Trigger: CCGAAGATGGATAAGAGATCACAAGTGAAAGGTCAG...GATAACTAGCCAGACCCCATGCCTTTGTTTCGTTTGGGAAGGAATACTTTTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR GCA 90 bp TGCAAAGACGAAGGAATCCTTTCTCAGAGAAAACTCAAGACTGAATATGGTAGAGCGTCTTCCTCAGACTaGAAAGTGGTCACCAGCAAT +
Preference number: 2 (lower is better)
Translates to: CKDEGILSQRKLKTEYGRASSSD*KVVTSN
Trigger: ATTGCTGGTGACCACTTTGCAGTCTGAGGAAGACGC...TCTACCATATTCAGTCTTGAGTTTTCTCTGAGAAAGGATTCCTTCGTCTTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR GCA 90 bp AACAAAATACCCTTGGTAACTTACTTGCACCTGCGTCTTCCTCAGACTGCAAAGCCAGCTACTGTCAAATaGCTGAGATTTGTTAACCAC +
Preference number: 2 (lower is better)
Translates to: NKIPLVTYLHLRLPQTAKPATVK*LRFVNH
Trigger: GTGGTTAACAAATCTCAGGCATTTGACAGTAGCTGG...CTTTGCAGTCTGAGGAAGACGCAGGTGCAAGTAAGTTACCAAGGGTATTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR GCA 90 bp ACTAAAAGTATTCCTTCCCAAACGAAACAAAGGCATGGGGTCTGGCTAGTTATCGGCTCTCCTTTAGCCTaGAGAATGTGGGTATATCTT +
Preference number: 2 (lower is better)
Translates to: TKSIPSQTKQRHGVWLVIGSPLA*RMWVYL
Trigger: AAGATATACCCACATTCTGCAGGCTAAAGGAGAGCC...GATAACTAGCCAGACCCCATGCCTTTGTTTCGTTTGGGAAGGAATACTTTTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR GCA 90 bp ACAATTGAGATATCCATACACACAAGTCATGTGCTGTGTGATGTTTTGGTCAGTCCCCTTCCCTCCCATTaGATTCACAATGGATCACCT +
Preference number: 2 (lower is better)
Translates to: TIEISIHTSHVLCDVLVSPLPSH*IHNGSP
Trigger: AGGTGATCCATTGTGAATGCAATGGGAGGGAAGGGG...ACTGACCAAAACATCACACAGCACATGACTTGTGTGTATGGATATCTCAATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR GCA 90 bp CCAGATTTGGGGGCATATCCCCAGCAAATATTGGTTAAGTCTGTGCTTCAGACTCCAGGTTTTTGCTGCTaGAGTCTGGTTCAAAATAAA +
Preference number: 2 (lower is better)
Translates to: PDLGAYPQQILVKSVLQTPGFCC*SLVQNK
Trigger: TTTATTTTGAACCAGACTGCAGCAGCAAAAACCTGG...AGTCTGAAGCACAGACTTAACCAATATTTGCTGGGGATATGCCCCCAAATCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000680385.1
3UTR-3UTR CCA 90 bp CCAGATTTGGGGGCATATCCCCAGCAAATATTGGTTAAGTCTGTGCTTCAGACTGTAACACACAGTAACTaGGCAGCTGATATAAAGTCT +
Preference number: 2 (lower is better)
Translates to: PDLGAYPQQILVKSVLQTVTHSN*AADIKS
Trigger: AGACTTTATATCAGCTGCCCAGTTACTGTGTGTTAC...AGTCTGAAGCACAGACTTAACCAATATTTGCTGGGGATATGCCCCCAAATCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CCA 90 bp CCAGATTTGGGGGCATATCCCCAGCAAATATTGGTTAAGTCTGTGCTTCAGACTCAGAGATTTTGTTTATaGCCAGATTTGGGGGCATAT +
Preference number: 2 (lower is better)
Translates to: PDLGAYPQQILVKSVLQTQRFCL*PDLGAY
Trigger: ATATGCCCCCAAATCTGGCCATAAACAAAATCTCTG...AGTCTGAAGCACAGACTTAACCAATATTTGCTGGGGATATGCCCCCAAATCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CCA 90 bp GATCTCTCAGACTTAACAAAGAACCAGCAGAGGCAGATGTTTCTGCTTACTATTCTAGAAGCTACTCTCTaGCTATCAACTCCCAACAGC +
Preference number: 2 (lower is better)
Translates to: DLSDLTKNQQRQMFLLTILEATL*LSTPNS
Trigger: GCTGTTGGGAGTTGATAGCCAGAGAGTAGCTTCTAG...AATAGTAAGCAGAAACATCTGCCTCTGCTGGTTCTTTGTTAAGTCTGAGAGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681330.1
3UTR-3UTR CCA 90 bp GATCTCTCAGACTTAACAAAGAACCAGCAGAGGCAGATGTTTCTGCTTACTATTTTCTCCTTGACATACTaGAAGGCCCTAGCCATGAAG +
Preference number: 2 (lower is better)
Translates to: DLSDLTKNQQRQMFLLTIFSLTY*KALAMK
Trigger: CTTCATGGCTAGGGCCTTCCAGTATGTCAAGGAGAA...AATAGTAAGCAGAAACATCTGCCTCTGCTGGTTCTTTGTTAAGTCTGAGAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681330.1
3UTR-3UTR TCA 90 bp CCAGATTTGGGGGCATATCCCCAGCAAATATTGGTTAAGTCTGTGCTTCAGACTATCAGAGACTTGGAATaGAAACAAAATACCCTTGGT +
Preference number: 2 (lower is better)
Translates to: PDLGAYPQQILVKSVLQTIRDLE*KQNTLG
Trigger: ACCAAGGGTATTTTGTTTTCATTCCAAGTCTCTGAT...AGTCTGAAGCACAGACTTAACCAATATTTGCTGGGGATATGCCCCCAAATCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR TCA 90 bp ACTAAAAGTATTCCTTCCCAAACGAAACAAAGGCATGGGGTCTGGCTAGTTATCATCTCTTGTGGACCTTaGACAAATTTCTCCAGCTAC +
Preference number: 2 (lower is better)
Translates to: TKSIPSQTKQRHGVWLVIISCGP*TNFSSY
Trigger: GTAGCTGGAGAAATTTGTTCAAGGTCCACAAGAGAT...GATAACTAGCCAGACCCCATGCCTTTGTTTCGTTTGGGAAGGAATACTTTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR TCA 90 bp GATCTCTCAGACTTAACAAAGAACCAGCAGAGGCAGATGTTTCTGCTTACTATTATTCTGCTCGCTCAGTaGGACAAGTTTCCCAGTTTT +
Preference number: 2 (lower is better)
Translates to: DLSDLTKNQQRQMFLLTIILLAQ*DKFPSF
Trigger: AAAACTGGGAAACTTGTCTCACTGAGCGAGCAGAAT...AATAGTAAGCAGAAACATCTGCCTCTGCTGGTTCTTTGTTAAGTCTGAGAGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681330.1
3UTR-3UTR GCA 90 bp CTTCACTTTTTATCACGTAACCTAACCATCTTGAGGTTATGTGTCAAAGGAAGACTGAGATCACACTACTaGACTCCAGCCTTGGTGACA +
Preference number: 2 (lower is better)
Translates to: LHFLSRNLTILRLCVKGRLRSHY*TPALVT
Trigger: TGTCACCAAGGCTGGAGTGCAGTAGTGTGATCTCAG...TCTTCCTTTGACACATAACCTCAAGATGGTTAGGTTACGTGATAAAAAGTGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR GCA 90 bp AATTCTTCATTGGTCCAACCCATGTTCACCAAGCCGATTTGCGGGCAGAAATGGCACAATGGAGATATATaGCCATATTGCACCTATAAT +
Preference number: 2 (lower is better)
Translates to: NSSLVQPMFTKPICGQKWHNGDI*PYCTYN
Trigger: ATTATAGGTGCAATATGGGCATATATCTCCATTGTG...CCATTTCTGCCCGCAAATCGGCTTGGTGAACATGGGTTGGACCAATGAAGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680787.1
3UTR-3UTR GCA 90 bp GATCTCTCAGACTTAACAAAGAACCAGCAGAGGCAGATGTTTCTGCTTACTATTCATGATCCAGGTTTTTaGTGCTGCAGTCTGGTTCAA +
Preference number: 2 (lower is better)
Translates to: DLSDLTKNQQRQMFLLTIHDPGF*CCSLVQ
Trigger: TTGAACCAGACTGCAGCAGCAAAAACCTGGATCATG...AATAGTAAGCAGAAACATCTGCCTCTGCTGGTTCTTTGTTAAGTCTGAGAGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681330.1
3UTR-3UTR GCA 90 bp GATCTCTCAGACTTAACAAAGAACCAGCAGAGGCAGATGTTTCTGCTTACTATTGCTGTTATTCGAATTTaGTCCTTCAAAGCCGTAGCC +
Preference number: 2 (lower is better)
Translates to: DLSDLTKNQQRQMFLLTIAVIRI*SFKAVA
Trigger: GGCTACGGCTTTGAAGGAGCAAATTCGAATAACAGC...AATAGTAAGCAGAAACATCTGCCTCTGCTGGTTCTTTGTTAAGTCTGAGAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681330.1
3UTR-3UTR CCA 90 bp TCTGACCTTTCACTTGTGATCTCTTATCCATCTTCGGCCAGAGGCCTCTTTTTGATTCACCCACAAGTTTaGTGTACTTTCTTCCAGTAT +
Preference number: 2 (lower is better)
Translates to: SDLSLVISYPSSARGLFLIHPQV*CTFFQY
Trigger: ATACTGGAAGAAAGTACACCAAACTTGTGGGTGAAT...CAAAAAGAGGCCTCTGGCCGAAGATGGATAAGAGATCACAAGTGAAAGGTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CCA 90 bp ACTAAAAGTATTCCTTCCCAAACGAAACAAAGGCATGGGGTCTGGCTAGTTATCTGTTTCCTTAGAGCCTaGGTTGTTGTTCCAAGAATC +
Preference number: 2 (lower is better)
Translates to: TKSIPSQTKQRHGVWLVICFLRA*VVVPRI
Trigger: GATTCTTGGAACAACAACCCAGGCTCTAAGGAAACA...GATAACTAGCCAGACCCCATGCCTTTGTTTCGTTTGGGAAGGAATACTTTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CCA 90 bp GATCTCTCAGACTTAACAAAGAACCAGCAGAGGCAGATGTTTCTGCTTACTATTCCCTTCCTGAATTTCTaGTTTCGAAAGCAACCCATC +
Preference number: 2 (lower is better)
Translates to: DLSDLTKNQQRQMFLLTIPFLNF*FRKQPI
Trigger: GATGGGTTGCTTTCGAAACCAGAAATTCAGGAAGGG...AATAGTAAGCAGAAACATCTGCCTCTGCTGGTTCTTTGTTAAGTCTGAGAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681330.1
3UTR-3UTR CCA 90 bp GATCTCTCAGACTTAACAAAGAACCAGCAGAGGCAGATGTTTCTGCTTACTATTCATTCTGGTAAGGTCTaGTGTCTAGAAGCTACTCTC +
Preference number: 2 (lower is better)
Translates to: DLSDLTKNQQRQMFLLTIHSGKV*CLEATL
Trigger: GAGAGTAGCTTCTAGACACCAGACCTTACCAGAATG...AATAGTAAGCAGAAACATCTGCCTCTGCTGGTTCTTTGTTAAGTCTGAGAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681330.1
3UTR-3UTR TCA 90 bp AACAAAATACCCTTGGTAACTTACTTGCACCTGCGTCTTCCTCAGACTGCAAAGATCAGAGACTTGGAATaGAAACAAAATACCCTTGGT +
Preference number: 2 (lower is better)
Translates to: NKIPLVTYLHLRLPQTAKIRDLE*KQNTLG
Trigger: ACCAAGGGTATTTTGTTTTCATTCCAAGTCTCTGAT...CTTTGCAGTCTGAGGAAGACGCAGGTGCAAGTAAGTTACCAAGGGTATTTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR TCA 90 bp ACAATTGAGATATCCATACACACAAGTCATGTGCTGTGTGATGTTTTGGTCAGTCTGACCTTTCACTTGTaGTCTCTTATCCATCTTCGG +
Preference number: 2 (lower is better)
Translates to: TIEISIHTSHVLCDVLVSLTFHL*SLIHLR
Trigger: CCGAAGATGGATAAGAGATCACAAGTGAAAGGTCAG...ACTGACCAAAACATCACACAGCACATGACTTGTGTGTATGGATATCTCAATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR TCA 90 bp ACTAAAAGTATTCCTTCCCAAACGAAACAAAGGCATGGGGTCTGGCTAGTTATCGTCTACTGGCTTGTTTaGAAAACGCTTTTAGACAAC +
Preference number: 2 (lower is better)
Translates to: TKSIPSQTKQRHGVWLVIVYWLV*KTLLDN
Trigger: GTTGTCTAAAAGCGTTTTTCAAACAAGCCAGTAGAC...GATAACTAGCCAGACCCCATGCCTTTGTTTCGTTTGGGAAGGAATACTTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR GCA 90 bp CTGTGCTTCAGACTAGATTTTTCAAGTCTACTGGCTTGTTTGAAAAACGCTTTTACCAACTTAGCCTGCTaGTGCAAAGACGAAGGAATC +
Preference number: 2 (lower is better)
Translates to: LCFRLDFSSLLACLKNAFTNLAC*CKDEGI
Trigger: GATTCCTTCGTCTTTGCAGCAGCAGGCTAAGTTGGT...AAAAGCGTTTTTCAAACAAGCCAGTAGACTTGAAAAATCTAGTCTGAAGCACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR GCA 90 bp AGTCTACTGGCTTGTTTGAAAAACGCTTTTAGACAACACATCAGGTTTGTAACTACCAACTTAGCCTGCTaGTGCAAAGACGAAGGAATC +
Preference number: 2 (lower is better)
Translates to: SLLACLKNAFRQHIRFVTTNLAC*CKDEGI
Trigger: GATTCCTTCGTCTTTGCAGCAGCAGGCTAAGTTGGT...AGTTACAAACCTGATGTGTTGTCTAAAAGCGTTTTTCAAACAAGCCAGTAGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR GCA 90 bp AGTCTACTGGCTTGTTTGAAAAACGCTTTTAGACAACACATCAGGTTTGTAACTAGTACCAACTTAGCCTaGTGCTGCAAAGACGAAGGA +
Preference number: 2 (lower is better)
Translates to: SLLACLKNAFRQHIRFVTSTNLA*CCKDEG
Trigger: TCCTTCGTCTTTGCAGCAGCAGGCTAAGTTGGTACT...AGTTACAAACCTGATGTGTTGTCTAAAAGCGTTTTTCAAACAAGCCAGTAGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR GCA 90 bp GATCTCTCAGACTTAACAAAGAACCAGCAGAGGCAGATGTTTCTGCTTACTATTGATCCAGGTTTTTGCTaGTGCAGTCTGGTTCAAAAT +
Preference number: 2 (lower is better)
Translates to: DLSDLTKNQQRQMFLLTIDPGFC*CSLVQN
Trigger: ATTTTGAACCAGACTGCAGCAGCAAAAACCTGGATC...AATAGTAAGCAGAAACATCTGCCTCTGCTGGTTCTTTGTTAAGTCTGAGAGATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681330.1
3UTR-3UTR CCA 90 bp ACAATTGAGATATCCATACACACAAGTCATGTGCTGTGTGATGTTTTGGTCAGTGGTAGATTCAGGAGTTaGGTAACACACAGTAACTGG +
Preference number: 2 (lower is better)
Translates to: TIEISIHTSHVLCDVLVSGRFRS*VTHSNW
Trigger: CCAGTTACTGTGTGTTACCCAACTCCTGAATCTACC...ACTGACCAAAACATCACACAGCACATGACTTGTGTGTATGGATATCTCAATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CCA 90 bp CTGTGCTTCAGACTAGATTTTTCAAGTCTACTGGCTTGTTTGAAAAACGCTTTTCCTCAGACTGCAAAGTaGTCACCAGCAATTCAGAGA +
Preference number: 2 (lower is better)
Translates to: LCFRLDFSSLLACLKNAFPQTAK*SPAIQR
Trigger: TCTCTGAATTGCTGGTGACCACTTTGCAGTCTGAGG...AAAAGCGTTTTTCAAACAAGCCAGTAGACTTGAAAAATCTAGTCTGAAGCACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CCA 90 bp ACTAAAAGTATTCCTTCCCAAACGAAACAAAGGCATGGGGTCTGGCTAGTTATCCAGAGATTTTGTTTATaGCCAGATTTGGGGGCATAT +
Preference number: 2 (lower is better)
Translates to: TKSIPSQTKQRHGVWLVIQRFCL*PDLGAY
Trigger: ATATGCCCCCAAATCTGGCCATAAACAAAATCTCTG...GATAACTAGCCAGACCCCATGCCTTTGTTTCGTTTGGGAAGGAATACTTTTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CCA 90 bp GATCTCTCAGACTTAACAAAGAACCAGCAGAGGCAGATGTTTCTGCTTACTATTATCCACTGCTACATATaGATAGGATTCCTCAGAGTC +
Preference number: 2 (lower is better)
Translates to: DLSDLTKNQQRQMFLLTIIHCYI*IGFLRV
Trigger: GACTCTGAGGAATCCTATCCATATGTAGCAGTGGAT...AATAGTAAGCAGAAACATCTGCCTCTGCTGGTTCTTTGTTAAGTCTGAGAGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681330.1
3UTR-3UTR TCA 90 bp ACTAAAAGTATTCCTTCCCAAACGAAACAAAGGCATGGGGTCTGGCTAGTTATCATCAGAGACTTGGAATaGAAACAAAATACCCTTGGT +
Preference number: 2 (lower is better)
Translates to: TKSIPSQTKQRHGVWLVIIRDLE*KQNTLG
Trigger: ACCAAGGGTATTTTGTTTTCATTCCAAGTCTCTGAT...GATAACTAGCCAGACCCCATGCCTTTGTTTCGTTTGGGAAGGAATACTTTTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR TCA 90 bp CTGTGCTTCAGACTAGATTTTTCAAGTCTACTGGCTTGTTTGAAAAACGCTTTTCTGACCTTTCACTTGTaGTCTCTTATCCATCTTCGG +
Preference number: 2 (lower is better)
Translates to: LCFRLDFSSLLACLKNAFLTFHL*SLIHLR
Trigger: CCGAAGATGGATAAGAGATCACAAGTGAAAGGTCAG...AAAAGCGTTTTTCAAACAAGCCAGTAGACTTGAAAAATCTAGTCTGAAGCACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR GCA 90 bp CTGTGCTTCAGACTAGATTTTTCAAGTCTACTGGCTTGTTTGAAAAACGCTTTTAACTTAGCCTGCTGCTaGAAAGACGAAGGAATCCTT +
Preference number: 2 (lower is better)
Translates to: LCFRLDFSSLLACLKNAFNLACC*KDEGIL
Trigger: AAGGATTCCTTCGTCTTTGCAGCAGCAGGCTAAGTT...AAAAGCGTTTTTCAAACAAGCCAGTAGACTTGAAAAATCTAGTCTGAAGCACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR GCA 90 bp TTCTGGACCCCAGCTGTTTTTGACGAGCCAATACTTGCTGTTATTCGAATTTGCCTGGTTCAAAATAAATaGCTGATTTGTAGAACTGGA +
Preference number: 2 (lower is better)
Translates to: FWTPAVFDEPILAVIRICLVQNK*LICRTG
Trigger: TCCAGTTCTACAAATCAGGCATTTATTTTGAACCAG...GCAAATTCGAATAACAGCAAGTATTGGCTCGTCAAAAACAGCTGGGGTCCAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000680385.1
ENST00000680787.1
3UTR-3UTR GCA 90 bp GATCTCTCAGACTTAACAAAGAACCAGCAGAGGCAGATGTTTCTGCTTACTATTCCAGGTTTTTGCTGCTaGAGTCTGGTTCAAAATAAA +
Preference number: 2 (lower is better)
Translates to: DLSDLTKNQQRQMFLLTIPGFCC*SLVQNK
Trigger: TTTATTTTGAACCAGACTGCAGCAGCAAAAACCTGG...AATAGTAAGCAGAAACATCTGCCTCTGCTGGTTCTTTGTTAAGTCTGAGAGATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681330.1
3UTR-3UTR CCA 90 bp ACAATTGAGATATCCATACACACAAGTCATGTGCTGTGTGATGTTTTGGTCAGTCAGCCTCATCTCTTGTaGACCTTGAACAAATTTCTC +
Preference number: 2 (lower is better)
Translates to: TIEISIHTSHVLCDVLVSQPHLL*TLNKFL
Trigger: GAGAAATTTGTTCAAGGTCCACAAGAGATGAGGCTG...ACTGACCAAAACATCACACAGCACATGACTTGTGTGTATGGATATCTCAATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR TCA 90 bp GATCTCTCAGACTTAACAAAGAACCAGCAGAGGCAGATGTTTCTGCTTACTATTTTTTATACCTGTTTTTaGCGAGCCAATACTTGCTGT +
Preference number: 2 (lower is better)
Translates to: DLSDLTKNQQRQMFLLTIFYTCF*RANTCC
Trigger: ACAGCAAGTATTGGCTCGTCAAAAACAGGTATAAAA...AATAGTAAGCAGAAACATCTGCCTCTGCTGGTTCTTTGTTAAGTCTGAGAGATC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000681330.1
3UTR-3UTR GCA 90 bp GATCTCTCAGACTTAACAAAGAACCAGCAGAGGCAGATGTTTCTGCTTACTATTACAGATTTCATCCACTaGTACATATGGATAGGATTC +
Preference number: 2 (lower is better)
Translates to: DLSDLTKNQQRQMFLLTITDFIH*YIWIGF
Trigger: GAATCCTATCCATATGTAGCAGTGGATGAAATCTGT...AATAGTAAGCAGAAACATCTGCCTCTGCTGGTTCTTTGTTAAGTCTGAGAGATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681330.1
3UTR-3UTR CCA 90 bp ACAATTGAGATATCCATACACACAAGTCATGTGCTGTGTGATGTTTTGGTCAGTGTAACACACAGTAACTaGGCAGCTGATATAAAGTCT +
Preference number: 2 (lower is better)
Translates to: TIEISIHTSHVLCDVLVSVTHSN*AADIKS
Trigger: AGACTTTATATCAGCTGCCCAGTTACTGTGTGTTAC...ACTGACCAAAACATCACACAGCACATGACTTGTGTGTATGGATATCTCAATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CCA 90 bp TCTCCAGCTACTGTCAAATGCCTGAGATTTGTTAACCACACCATTTATTTTTGCGTAACACACAGTAACTaGGCAGCTGATATAAAGTCT +
Preference number: 2 (lower is better)
Translates to: SPATVKCLRFVNHTIYFCVTHSN*AADIKS
Trigger: AGACTTTATATCAGCTGCCCAGTTACTGTGTGTTAC...GCAAAAATAAATGGTGTGGTTAACAAATCTCAGGCATTTGACAGTAGCTGGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CCA 90 bp AGTCTACTGGCTTGTTTGAAAAACGCTTTTAGACAACACATCAGGTTTGTAACTCTATCAAAGGGTTTTTaGGATACACAGTCCCACATG +
Preference number: 2 (lower is better)
Translates to: SLLACLKNAFRQHIRFVTLSKGF*DTQSHM
Trigger: CATGTGGGACTGTGTATCCCAAAAACCCTTTGATAG...AGTTACAAACCTGATGTGTTGTCTAAAAGCGTTTTTCAAACAAGCCAGTAGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CCA 90 bp ACAATTGAGATATCCATACACACAAGTCATGTGCTGTGTGATGTTTTGGTCAGTATCCCCAGCAAATATTaGTTAAGTCTGTGCTTCAGA +
Preference number: 2 (lower is better)
Translates to: TIEISIHTSHVLCDVLVSIPSKY*LSLCFR
Trigger: TCTGAAGCACAGACTTAACCAATATTTGCTGGGGAT...ACTGACCAAAACATCACACAGCACATGACTTGTGTGTATGGATATCTCAATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR GCA 90 bp AGTCTACTGGCTTGTTTGAAAAACGCTTTTAGACAACACATCAGGTTTGTAACTAACCTGTCACAGTACTaGAGAGATTTTGTTTATGGC +
Preference number: 2 (lower is better)
Translates to: SLLACLKNAFRQHIRFVTNLSQY*RDFVYG
Trigger: GCCATAAACAAAATCTCTGCAGTACTGTGACAGGTT...AGTTACAAACCTGATGTGTTGTCTAAAAGCGTTTTTCAAACAAGCCAGTAGACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR GCA 90 bp ACAATTGAGATATCCATACACACAAGTCATGTGCTGTGTGATGTTTTGGTCAGTTCCTCCCTCTTAATATaGTCAGTGATTTCTATCTCA +
Preference number: 2 (lower is better)
Translates to: TIEISIHTSHVLCDVLVSSSLLI*SVISIS
Trigger: TGAGATAGAAATCACTGAGCATATTAAGAGGGAGGA...ACTGACCAAAACATCACACAGCACATGACTTGTGTGTATGGATATCTCAATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR GCA 90 bp GATCTCTCAGACTTAACAAAGAACCAGCAGAGGCAGATGTTTCTGCTTACTATTCTGGTTCAAAATAAATaGCTGATTTGTAGAACTGGA +
Preference number: 2 (lower is better)
Translates to: DLSDLTKNQQRQMFLLTILVQNK*LICRTG
Trigger: TCCAGTTCTACAAATCAGGCATTTATTTTGAACCAG...AATAGTAAGCAGAAACATCTGCCTCTGCTGGTTCTTTGTTAAGTCTGAGAGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681330.1
3UTR-3UTR CCA 90 bp AGTCTACTGGCTTGTTTGAAAAACGCTTTTAGACAACACATCAGGTTTGTAACTGTAACACACAGTAACTaGGCAGCTGATATAAAGTCT +
Preference number: 2 (lower is better)
Translates to: SLLACLKNAFRQHIRFVTVTHSN*AADIKS
Trigger: AGACTTTATATCAGCTGCCCAGTTACTGTGTGTTAC...AGTTACAAACCTGATGTGTTGTCTAAAAGCGTTTTTCAAACAAGCCAGTAGACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CCA 90 bp TGCAAAGACGAAGGAATCCTTTCTCAGAGAAAACTCAAGACTGAATATGGTAGAATTCACCCACAAGTTTaGTGTACTTTCTTCCAGTAT +
Preference number: 2 (lower is better)
Translates to: CKDEGILSQRKLKTEYGRIHPQV*CTFFQY
Trigger: ATACTGGAAGAAAGTACACCAAACTTGTGGGTGAAT...TCTACCATATTCAGTCTTGAGTTTTCTCTGAGAAAGGATTCCTTCGTCTTTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR GCA 90 bp AGTCTACTGGCTTGTTTGAAAAACGCTTTTAGACAACACATCAGGTTTGTAACTCTGGTTCAAAATAAATaGCTGATTTGTAGAACTGGA +
Preference number: 2 (lower is better)
Translates to: SLLACLKNAFRQHIRFVTLVQNK*LICRTG
Trigger: TCCAGTTCTACAAATCAGGCATTTATTTTGAACCAG...AGTTACAAACCTGATGTGTTGTCTAAAAGCGTTTTTCAAACAAGCCAGTAGACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680385.1
3UTR GCA 72 bp AGCCGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTaGTCTCATTCCGGTAAACCTTCAGCATGGCGTCAT +
Preference number: 3 (lower is better)
Translates to: SRFPALGGPGVP*SHSGKPSAWRH
Trigger: ATGACGCCATGCTGAAGGTTTACCGGAATGAGAGCAAGGAACACCTGGACCACCCAGGGCGGGAAAACGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CAA 90 bp GCCGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCTCTCATTCCGGTAAACGCTATCAAAGGGTTTTaGGGATACACAGTCCCACAT +
Preference number: 3 (lower is better)
Translates to: AVFPPWVVQVFLALIPVNAIKGF*GYTVPH
Trigger: ATGTGGGACTGTGTATCCCAAAAACCCTTTGATAGC...GTTTACCGGAATGAGAGCAAGGAACACCTGGACCACCCAGGGCGGGAAAACGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CAA 90 bp TTAGGAACGCCTTTAAGCCGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCTCCTTAGAGCCTGGGTaGTTGTTCCAAGAATCTGTG +
Preference number: 3 (lower is better)
Translates to: LGTPLSRFPALGGPGVPCSLEPG*LFQESV
Trigger: CACAGATTCTTGGAACAACAACCCAGGCTCTAAGGA...GCAAGGAACACCTGGACCACCCAGGGCGGGAAAACGGCTTAAAGGCGTTCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CAA 90 bp GCCGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCTCTCATTCCGGTAAACCGTAACCTAACCATCTaGAGGTTATGTGTCAAAGGA +
Preference number: 3 (lower is better)
Translates to: AVFPPWVVQVFLALIPVNRNLTI*RLCVKG
Trigger: TCCTTTGACACATAACCTCAAGATGGTTAGGTTACG...GTTTACCGGAATGAGAGCAAGGAACACCTGGACCACCCAGGGCGGGAAAACGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CAA 90 bp CGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCTCTCATTCCGGTAAACCTCGTAACCTAACCATCTaGAGGTTATGTGTCAAAGGA +
Preference number: 3 (lower is better)
Translates to: RFPALGGPGVPCSHSGKPRNLTI*RLCVKG
Trigger: TCCTTTGACACATAACCTCAAGATGGTTAGGTTACG...AGGTTTACCGGAATGAGAGCAAGGAACACCTGGACCACCCAGGGCGGGAAAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CAA 90 bp CCTGCGTCTTCCTCAGACTGCAAAGTGGTCACCAGCAATTCAGAGAGGCTCCAGGCGATTCCACAGTGGTaGTTCTTGTCTTTGGCTATT +
Preference number: 3 (lower is better)
Translates to: PASSSDCKVVTSNSERLQAIPQW*FLSLAI
Trigger: AATAGCCAAAGACAAGAACAACCACTGTGGAATCGC...CTGGAGCCTCTCTGAATTGCTGGTGACCACTTTGCAGTCTGAGGAAGACGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680385.1
3UTR GCA 72 bp CTTGGTAACTTACTTGCACCTGCGTCTTCCTCAGACTaGAAAGTGGTCACCAGCAATTCAGAGAGGCTCCAG +
Preference number: 3 (lower is better)
Translates to: LGNLLAPASSSD*KVVTSNSERLQ
Trigger: CTGGAGCCTCTCTGAATTGCTGGTGACCACTTTGCAGTCTGAGGAAGACGCAGGTGCAAGTAAGTTACCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR CCA 72 bp AGAGATGGCTGTGGACATAGGCTATCAAAGGGTTTTTaGGATACACAGTCCCACATGCCCCTTCCCTCCCAT +
Preference number: 3 (lower is better)
Translates to: RDGCGHRLSKGF*DTQSHMPLPSH
Trigger: ATGGGAGGGAAGGGGCATGTGGGACTGTGTATCCCAAAAACCCTTTGATAGCCTATGTCCACAGCCATCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CAA 90 bp GATGTTTCCTTAGAGCCTGGGTTGTTGTTCCAAGAATCTGTGGAGAGTACCAACGCCCCTTCCCTCCCATaGCATTCACAATGGATCACC +
Preference number: 3 (lower is better)
Translates to: DVSLEPGLLFQESVESTNAPSLP*HSQWIT
Trigger: GGTGATCCATTGTGAATGCAATGGGAGGGAAGGGGC...GTTGGTACTCTCCACAGATTCTTGGAACAACAACCCAGGCTCTAAGGAAACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CAA 90 bp AGGGGACTCACAGCTTTCAGAGCTGAGAGCCCCGAACAGAGATTTACCCATGTTTCCTTAGAGCCTGGGTaGTTGTTCCAAGAATCTGTG +
Preference number: 3 (lower is better)
Translates to: RGLTAFRAESPEQRFTHVSLEPG*LFQESV
Trigger: CACAGATTCTTGGAACAACAACCCAGGCTCTAAGGA...AACATGGGTAAATCTCTGTTCGGGGCTCTCAGCTCTGAAAGCTGTGAGTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR GCA 72 bp CAAACGAAACAAAGGCATGGGGTCTGGCTAGTTATCTaGAGCAGGAACATGTCCTTAAGGCACAGATCGCTC +
Preference number: 3 (lower is better)
Translates to: QTKQRHGVWLVI*SRNMSLRHRSL
Trigger: GAGCGATCTGTGCCTTAAGGACATGTTCCTGCTGCAGATAACTAGCCAGACCCCATGCCTTTGTTTCGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR CCA 72 bp ACTTACTTGCACCTGCGTCTTCCTCAGACTGCAAAGTaGTCACCAGCAATTCAGAGAGGCTCCAGTAACAAG +
Preference number: 3 (lower is better)
Translates to: TYLHLRLPQTAK*SPAIQRGSSNK
Trigger: CTTGTTACTGGAGCCTCTCTGAATTGCTGGTGACCACTTTGCAGTCTGAGGAAGACGCAGGTGCAAGTAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CAA 90 bp GATCTCTCAGACTTAACAAAGAACCAGCAGAGGCAGATGTTTCTGCTTACTATTGCAGCCCTGATTGCCTaGAGGACGCGAACAGTCCAC +
Preference number: 3 (lower is better)
Translates to: DLSDLTKNQQRQMFLLTIAALIA*RTRTVH
Trigger: GTGGACTGTTCGCGTCCTCAAGGCAATCAGGGCTGC...AATAGTAAGCAGAAACATCTGCCTCTGCTGGTTCTTTGTTAAGTCTGAGAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681330.1
3UTR-3UTR CAA 90 bp CCTGCGTCTTCCTCAGACTGCAAAGTGGTCACCAGCAATTCAGAGAGGCTCCAGCCACAGTGGTTGTTCTaGTCTTTGGCTATTTTTACA +
Preference number: 3 (lower is better)
Translates to: PASSSDCKVVTSNSERLQPQWLF*SLAIFT
Trigger: TGTAAAAATAGCCAAAGACAAGAACAACCACTGTGG...CTGGAGCCTCTCTGAATTGCTGGTGACCACTTTGCAGTCTGAGGAAGACGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680385.1
3UTR TCA 72 bp AGAGTGGGAAATCAGGGGACTCACAGCTTTCAGAGCTaGGAGCCCCGAACAGAGATTTACCCATGTTTATTG +
Preference number: 3 (lower is better)
Translates to: RVGNQGTHSFQS*EPRTEIYPCLL
Trigger: CAATAAACATGGGTAAATCTCTGTTCGGGGCTCTCAGCTCTGAAAGCTGTGAGTCCCCTGATTTCCCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR GCA 72 bp CATGGCGTCATGGCCATCATGAACCTGTCACAGTACTaGAGAGATTTTGTTTATGGCCAGATTTGGGGGCAT +
Preference number: 3 (lower is better)
Translates to: HGVMAIMNLSQY*RDFVYGQIWGH
Trigger: ATGCCCCCAAATCTGGCCATAAACAAAATCTCTGCAGTACTGTGACAGGTTCATGATGGCCATGACGCCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CAA 90 bp TTGGGATACACAGTCCCACATGCCCCTTCCCTCCCATTGCATTCACAATGGATCCGTAACCTAACCATCTaGAGGTTATGTGTCAAAGGA +
Preference number: 3 (lower is better)
Translates to: LGYTVPHAPSLPLHSQWIRNLTI*RLCVKG
Trigger: TCCTTTGACACATAACCTCAAGATGGTTAGGTTACG...GATCCATTGTGAATGCAATGGGAGGGAAGGGGCATGTGGGACTGTGTATCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CAA 90 bp AACAAAATACCCTTGGTAACTTACTTGCACCTGCGTCTTCCTCAGACTGCAAAGCCCTTGGTAACTTACTaGCACCTGCGTCTTCCTCAG +
Preference number: 3 (lower is better)
Translates to: NKIPLVTYLHLRLPQTAKPLVTY*HLRLPQ
Trigger: CTGAGGAAGACGCAGGTGCAAGTAAGTTACCAAGGG...CTTTGCAGTCTGAGGAAGACGCAGGTGCAAGTAAGTTACCAAGGGTATTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CAA 90 bp AGGGGACTCACAGCTTTCAGAGCTGAGAGCCCCGAACAGAGATTTACCCATGTTTATCCCCAGCAAATATaGGTTAAGTCTGTGCTTCAG +
Preference number: 3 (lower is better)
Translates to: RGLTAFRAESPEQRFTHVYPQQI*VKSVLQ
Trigger: CTGAAGCACAGACTTAACCAATATTTGCTGGGGATA...AACATGGGTAAATCTCTGTTCGGGGCTCTCAGCTCTGAAAGCTGTGAGTCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CAA 90 bp TCTGACCTTTCACTTGTGATCTCTTATCCATCTTCGGCCAGAGGCCTCTTTTTGGCCCAGCCTCATCTCTaGTGGACCTTGAACAAATTT +
Preference number: 3 (lower is better)
Translates to: SDLSLVISYPSSARGLFLAQPHL*WTLNKF
Trigger: AAATTTGTTCAAGGTCCACAAGAGATGAGGCTGGGC...CAAAAAGAGGCCTCTGGCCGAAGATGGATAAGAGATCACAAGTGAAAGGTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR CCA 72 bp AGTATTCCTTCCCAAACGAAACAAAGGCATGGGGTCTaGCTAGTTATCTGCAGCAGGAACATGTCCTTAAGG +
Preference number: 3 (lower is better)
Translates to: SIPSQTKQRHGV*LVICSRNMSLR
Trigger: CCTTAAGGACATGTTCCTGCTGCAGATAACTAGCCAGACCCCATGCCTTTGTTTCGTTTGGGAAGGAATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CAA 90 bp TCCTTAGAGCCTGGGTTGTTGTTCCAAGAATCTGTGGAGAGTACCAACTTAGCCCATCTCTTGTGGACCTaGAACAAATTTCTCCAGCTA +
Preference number: 3 (lower is better)
Translates to: SLEPGLLFQESVESTNLAHLLWT*NKFLQL
Trigger: TAGCTGGAGAAATTTGTTCAAGGTCCACAAGAGATG...GGCTAAGTTGGTACTCTCCACAGATTCTTGGAACAACAACCCAGGCTCTAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CAA 90 bp GATCTCTCAGACTTAACAAAGAACCAGCAGAGGCAGATGTTTCTGCTTACTATTCAGGTCCACAGTCCTTaGTCTGAAACCCTTGAGGAC +
Preference number: 3 (lower is better)
Translates to: DLSDLTKNQQRQMFLLTIQVHSP*SETLED
Trigger: GTCCTCAAGGGTTTCAGACAAAGGACTGTGGACCTG...AATAGTAAGCAGAAACATCTGCCTCTGCTGGTTCTTTGTTAAGTCTGAGAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681330.1
3UTR GCA 72 bp TTGTTCCAAGAATCTGTGGAGAGTACCAACTTAGCCTaGTGCTGCAAAGACGAAGGAATCCTTTCTCAGAGA +
Preference number: 3 (lower is better)
Translates to: LFQESVESTNLA*CCKDEGILSQR
Trigger: TCTCTGAGAAAGGATTCCTTCGTCTTTGCAGCAGCAGGCTAAGTTGGTACTCTCCACAGATTCTTGGAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CAA 90 bp AGTCTACTGGCTTGTTTGAAAAACGCTTTTAGACAACACATCAGGTTTGTAACTGCCCCTTCCCTCCCATaGCATTCACAATGGATCACC +
Preference number: 3 (lower is better)
Translates to: SLLACLKNAFRQHIRFVTAPSLP*HSQWIT
Trigger: GGTGATCCATTGTGAATGCAATGGGAGGGAAGGGGC...AGTTACAAACCTGATGTGTTGTCTAAAAGCGTTTTTCAAACAAGCCAGTAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CAA 90 bp TCTCCAGCTACTGTCAAATGCCTGAGATTTGTTAACCACACCATTTATTTTTGCGGACCCCAGCTGTTTTaGACGAGCCAATACTTGCTG +
Preference number: 3 (lower is better)
Translates to: SPATVKCLRFVNHTIYFCGPQLF*TSQYLL
Trigger: CAGCAAGTATTGGCTCGTCAAAAACAGCTGGGGTCC...GCAAAAATAAATGGTGTGGTTAACAAATCTCAGGCATTTGACAGTAGCTGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000680385.1
3UTR GCA 72 bp TTCCAAGAATCTGTGGAGAGTACCAACTTAGCCTGCTaGTGCAAAGACGAAGGAATCCTTTCTCAGAGAAAA +
Preference number: 3 (lower is better)
Translates to: FQESVESTNLAC*CKDEGILSQRK
Trigger: TTTTCTCTGAGAAAGGATTCCTTCGTCTTTGCAGCAGCAGGCTAAGTTGGTACTCTCCACAGATTCTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CAA 90 bp AACAAAATACCCTTGGTAACTTACTTGCACCTGCGTCTTCCTCAGACTGCAAAGCATCTCTTGTGGACCTaGAACAAATTTCTCCAGCTA +
Preference number: 3 (lower is better)
Translates to: NKIPLVTYLHLRLPQTAKHLLWT*NKFLQL
Trigger: TAGCTGGAGAAATTTGTTCAAGGTCCACAAGAGATG...CTTTGCAGTCTGAGGAAGACGCAGGTGCAAGTAAGTTACCAAGGGTATTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR TCA 72 bp AGGCTATACCATCTAGGTTTGTGTCAGTGTACTCTATaGTGTTCACGTCACGATGAAATCACCCAAGACACA +
Preference number: 3 (lower is better)
Translates to: RLYHLGLCQCTL*CSRHDEITQDT
Trigger: TGTGTCTTGGGTGATTTCATCGTGACGTGAACATCATAGAGTACACTGACACAAACCTAGATGGTATAGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CAA 90 bp ACAATTGAGATATCCATACACACAAGTCATGTGCTGTGTGATGTTTTGGTCAGTGCCCAGCCTCATCTCTaGTGGACCTTGAACAAATTT +
Preference number: 3 (lower is better)
Translates to: TIEISIHTSHVLCDVLVSAQPHL*WTLNKF
Trigger: AAATTTGTTCAAGGTCCACAAGAGATGAGGCTGGGC...ACTGACCAAAACATCACACAGCACATGACTTGTGTGTATGGATATCTCAATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CAA 90 bp GATCTCTCAGACTTAACAAAGAACCAGCAGAGGCAGATGTTTCTGCTTACTATTTGCTGTTATTCGAATTaGCTCCTTCAAAGCCGTAGC +
Preference number: 3 (lower is better)
Translates to: DLSDLTKNQQRQMFLLTICCYSN*LLQSRS
Trigger: GCTACGGCTTTGAAGGAGCAAATTCGAATAACAGCA...AATAGTAAGCAGAAACATCTGCCTCTGCTGGTTCTTTGTTAAGTCTGAGAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681330.1
3UTR TCA 72 bp GCTGAGAGCCCCGAACAGAGATTTACCCATGTTTATTaGCAGCAAGCCAGTGATAAACATTGTTTCTATAGA +
Preference number: 3 (lower is better)
Translates to: AESPEQRFTHVY*QQASDKHCFYR
Trigger: TCTATAGAAACAATGTTTATCACTGGCTTGCTGTCAATAAACATGGGTAAATCTCTGTTCGGGGCTCTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR GCA 72 bp AACAAACAATTTAGATGTTCGAGTATAGGAAATATTTaGCGAGACCAGCTTGGTCATGGAGACCCTAACCCA +
Preference number: 3 (lower is better)
Translates to: NKQFRCSSIGNI*RDQLGHGDPNP
Trigger: TGGGTTAGGGTCTCCATGACCAAGCTGGTCTCGGCAAATATTTCCTATACTCGAACATCTAAATTGTTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR CCA 72 bp TCATTCAATTTAGTGCCTAGATGTTTCCTTAGAGCCTaGGTTGTTGTTCCAAGAATCTGTGGAGAGTACCAA +
Preference number: 3 (lower is better)
Translates to: SFNLVPRCFLRA*VVVPRICGEYQ
Trigger: TTGGTACTCTCCACAGATTCTTGGAACAACAACCCAGGCTCTAAGGAAACATCTAGGCACTAAATTGAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CAA 90 bp CTGTGCTTCAGACTAGATTTTTCAAGTCTACTGGCTTGTTTGAAAAACGCTTTTTTAGAGCCTGGGTTGTaGTTCCAAGAATCTGTGGAG +
Preference number: 3 (lower is better)
Translates to: LCFRLDFSSLLACLKNAFLEPGL*FQESVE
Trigger: CTCCACAGATTCTTGGAACAACAACCCAGGCTCTAA...AAAAGCGTTTTTCAAACAAGCCAGTAGACTTGAAAAATCTAGTCTGAAGCACAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CAA 90 bp ACAATTGAGATATCCATACACACAAGTCATGTGCTGTGTGATGTTTTGGTCAGTTGCTGTTATTCGAATTaGCTCCTTCAAAGCCGTAGC +
Preference number: 3 (lower is better)
Translates to: TIEISIHTSHVLCDVLVSCCYSN*LLQSRS
Trigger: GCTACGGCTTTGAAGGAGCAAATTCGAATAACAGCA...ACTGACCAAAACATCACACAGCACATGACTTGTGTGTATGGATATCTCAATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680385.1
3UTR-3UTR CAA 90 bp GATCTCTCAGACTTAACAAAGAACCAGCAGAGGCAGATGTTTCTGCTTACTATTTGCCTGAATTCTTCATaGGTCATGTCACCAAAAGCA +
Preference number: 3 (lower is better)
Translates to: DLSDLTKNQQRQMFLLTICLNSS*VMSPKA
Trigger: TGCTTTTGGTGACATGACCAATGAAGAATTCAGGCA...AATAGTAAGCAGAAACATCTGCCTCTGCTGGTTCTTTGTTAAGTCTGAGAGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681330.1
3UTR-3UTR CAA 90 bp GATCTCTCAGACTTAACAAAGAACCAGCAGAGGCAGATGTTTCTGCTTACTATTCTTTGTCTGAAACCCTaGAGGACTAATGTGTTTCAG +
Preference number: 3 (lower is better)
Translates to: DLSDLTKNQQRQMFLLTILCLKP*RTNVFQ
Trigger: CTGAAACACATTAGTCCTCAAGGGTTTCAGACAAAG...AATAGTAAGCAGAAACATCTGCCTCTGCTGGTTCTTTGTTAAGTCTGAGAGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681330.1
3UTR-3UTR CAA 90 bp TCTCCAGCTACTGTCAAATGCCTGAGATTTGTTAACCACACCATTTATTTTTGCCGTAACCTAACCATCTaGAGGTTATGTGTCAAAGGA +
Preference number: 3 (lower is better)
Translates to: SPATVKCLRFVNHTIYFCRNLTI*RLCVKG
Trigger: TCCTTTGACACATAACCTCAAGATGGTTAGGTTACG...GCAAAAATAAATGGTGTGGTTAACAAATCTCAGGCATTTGACAGTAGCTGGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CAA 90 bp GATCTCTCAGACTTAACAAAGAACCAGCAGAGGCAGATGTTTCTGCTTACTATTTTGACGAGCCAATACTaGCTGTTATTCGAATTTGCT +
Preference number: 3 (lower is better)
Translates to: DLSDLTKNQQRQMFLLTILTSQY*LLFEFA
Trigger: AGCAAATTCGAATAACAGCAAGTATTGGCTCGTCAA...AATAGTAAGCAGAAACATCTGCCTCTGCTGGTTCTTTGTTAAGTCTGAGAGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681330.1
3UTR-3UTR CAA 90 bp GATCTCTCAGACTTAACAAAGAACCAGCAGAGGCAGATGTTTCTGCTTACTATTGTTTTATACCTGTTTTaGACGAGCCAATACTTGCTG +
Preference number: 3 (lower is better)
Translates to: DLSDLTKNQQRQMFLLTIVLYLF*TSQYLL
Trigger: CAGCAAGTATTGGCTCGTCAAAAACAGGTATAAAAC...AATAGTAAGCAGAAACATCTGCCTCTGCTGGTTCTTTGTTAAGTCTGAGAGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681330.1
3UTR GCA 72 bp GTGGACCTTGAACAAATTTCTCCAGCTACTGTCAAATaGCTGAGATTTGTTAACCACACCATTTATTTTTGC +
Preference number: 3 (lower is better)
Translates to: VDLEQISPATVK*LRFVNHTIYFC
Trigger: GCAAAAATAAATGGTGTGGTTAACAAATCTCAGGCATTTGACAGTAGCTGGAGAAATTTGTTCAAGGTCCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR GCA 72 bp TGTTTACAATTGAGATATCCATACACACAAGTCATGTaGTGTGTGATGTTTTGGTCAGTGACTGCATATATG +
Preference number: 3 (lower is better)
Translates to: CLQLRYPYTQVM*CVMFWSVTAYM
Trigger: CATATATGCAGTCACTGACCAAAACATCACACAGCACATGACTTGTGTGTATGGATATCTCAATTGTAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
3UTR-3UTR CAA 90 bp AGTCTACTGGCTTGTTTGAAAAACGCTTTTAGACAACACATCAGGTTTGTAACTAGTCTACTGGCTTGTTaGAAAAACGCTTTTAGACAA +
Preference number: 3 (lower is better)
Translates to: SLLACLKNAFRQHIRFVTSLLAC*KNAFRQ
Trigger: TTGTCTAAAAGCGTTTTTCAAACAAGCCAGTAGACT...AGTTACAAACCTGATGTGTTGTCTAAAAGCGTTTTTCAAACAAGCCAGTAGACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp GCCGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCTCTCATTCCGGTAAACGCTGAGGCAGAGAATTaGTTAAACCCGGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: AVFPPWVVQVFLALIPVNAEAEN*LNPGGR
Trigger: TCTGCCTCCCGGGTTTAAGCAATTCTCTGCCTCAGC...GTTTACCGGAATGAGAGCAAGGAACACCTGGACCACCCAGGGCGGGAAAACGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp CCTGCGTCTTCCTCAGACTGCAAAGTGGTCACCAGCAATTCAGAGAGGCTCCAGCAGCAAACAAGCCTCTaGGATTACAGACGTCCGCGG +
Preference number: 4 (lower is better)
Translates to: PASSSDCKVVTSNSERLQQQTSL*DYRRPR
Trigger: CCGCGGACGTCTGTAATCTCAGAGGCTTGTTTGCTG...CTGGAGCCTCTCTGAATTGCTGGTGACCACTTTGCAGTCTGAGGAAGACGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259470.6
ENST00000680385.1
ENST00000681927.1
CDS-3UTR TCA 90 bp TTAGGAACGCCTTTAAGCCGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCAGGCAGAGGTTGCAGTaGGCTGAGATCACACTACTG +
Preference number: 4 (lower is better)
Translates to: LGTPLSRFPALGGPGVPCRQRLQ*AEITLL
Trigger: CAGTAGTGTGATCTCAGCTCACTGCAACCTCTGCCT...GCAAGGAACACCTGGACCACCCAGGGCGGGAAAACGGCTTAAAGGCGTTCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp CGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCTCTCATTCCGGTAAACCTAGGCAGAGGTTGCAGTaGGCTGAGATCACACTACTG +
Preference number: 4 (lower is better)
Translates to: RFPALGGPGVPCSHSGKPRQRLQ*AEITLL
Trigger: CAGTAGTGTGATCTCAGCTCACTGCAACCTCTGCCT...AGGTTTACCGGAATGAGAGCAAGGAACACCTGGACCACCCAGGGCGGGAAAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp GCCGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCTCTCATTCCGGTAAACCCCCTTCCCTCCCATTaGATTCACAATGGATCACCT +
Preference number: 4 (lower is better)
Translates to: AVFPPWVVQVFLALIPVNPLPSH*IHNGSP
Trigger: AGGTGATCCATTGTGAATGCAATGGGAGGGAAGGGG...GTTTACCGGAATGAGAGCAAGGAACACCTGGACCACCCAGGGCGGGAAAACGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TTAGGAACGCCTTTAAGCCGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCATACACAGTCCCACATaGCCCTTCCCTCCCATTGCA +
Preference number: 4 (lower is better)
Translates to: LGTPLSRFPALGGPGVPCIHSPT*PFPPIA
Trigger: TGCAATGGGAGGGAAGGGGCATGTGGGACTGTGTAT...GCAAGGAACACCTGGACCACCCAGGGCGGGAAAACGGCTTAAAGGCGTTCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp GCCGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCTCTCATTCCGGTAAACACCATCCCAAGTAGATaGAAGCGGATCCCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: AVFPPWVVQVFLALIPVNTIPSR*KRIPKE
Trigger: TTCCTTGGGGATCCGCTTGCATCTACTTGGGATGGT...GTTTACCGGAATGAGAGCAAGGAACACCTGGACCACCCAGGGCGGGAAAACGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681927.1
CDS-3UTR CCA 90 bp GGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTTCCTCCCCCTGTCCCTCGGTCTaGTCGGGGGCGCTCACCAGC +
Preference number: 4 (lower is better)
Translates to: GQFQDKISPDMLSLSPSSPCPSV*SGALTS
Trigger: GCTGGTGAGCGCCCCCGACCAGACCGAGGGACAGGG...GGAGGAAGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000680787.1
ENST00000681737.1
CDS-3UTR TCA 90 bp TTAGGAACGCCTTTAAGCCGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCGCCTGGCCAAGATGGTaGAACCCTCTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: LGTPLSRFPALGGPGVPCAWPRW*NPLSTK
Trigger: TTTAGTAGAGAGAGGGTTTCACCATCTTGGCCAGGC...GCAAGGAACACCTGGACCACCCAGGGCGGGAAAACGGCTTAAAGGCGTTCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TTAGGAACGCCTTTAAGCCGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCCAGTCCACCAGATTCTaGTCGCTCAGTGAGACAAGT +
Preference number: 4 (lower is better)
Translates to: LGTPLSRFPALGGPGVPCQSTRF*SLSETS
Trigger: ACTTGTCTCACTGAGCGAGCAGAATCTGGTGGACTG...GCAAGGAACACCTGGACCACCCAGGGCGGGAAAACGGCTTAAAGGCGTTCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000681927.1
CDS-3UTR GCA 90 bp GCCGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCTCTCATTCCGGTAAACAGTACCAACTTAGCCTaGTGCTGCAAAGACGAAGGA +
Preference number: 4 (lower is better)
Translates to: AVFPPWVVQVFLALIPVNSTNLA*CCKDEG
Trigger: TCCTTCGTCTTTGCAGCAGCAGGCTAAGTTGGTACT...GTTTACCGGAATGAGAGCAAGGAACACCTGGACCACCCAGGGCGGGAAAACGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp GCCGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCTCTCATTCCGGTAAACTTCTCCTTGACATACTaGAAGGCCCTAGCCATGAAG +
Preference number: 4 (lower is better)
Translates to: AVFPPWVVQVFLALIPVNFSLTY*KALAMK
Trigger: CTTCATGGCTAGGGCCTTCCAGTATGTCAAGGAGAA...GTTTACCGGAATGAGAGCAAGGAACACCTGGACCACCCAGGGCGGGAAAACGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000681927.1
CDS-3UTR TCA 90 bp CCTGCGTCTTCCTCAGACTGCAAAGTGGTCACCAGCAATTCAGAGAGGCTCCAGGACCCCAGCTGTTTTTaGCGAGCCAATACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: PASSSDCKVVTSNSERLQDPSCF*RANTCC
Trigger: ACAGCAAGTATTGGCTCGTCAAAAACAGCTGGGGTC...CTGGAGCCTCTCTGAATTGCTGGTGACCACTTTGCAGTCTGAGGAAGACGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp CCTGCGTCTTCCTCAGACTGCAAAGTGGTCACCAGCAATTCAGAGAGGCTCCAGCAGTCCACCAGATTCTaGTCGCTCAGTGAGACAAGT +
Preference number: 4 (lower is better)
Translates to: PASSSDCKVVTSNSERLQQSTRF*SLSETS
Trigger: ACTTGTCTCACTGAGCGAGCAGAATCTGGTGGACTG...CTGGAGCCTCTCTGAATTGCTGGTGACCACTTTGCAGTCTGAGGAAGACGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000681927.1
CDS-3UTR GCA 90 bp CCTGCGTCTTCCTCAGACTGCAAAGTGGTCACCAGCAATTCAGAGAGGCTCCAGCTGAGATCACACTACTaGACTCCAGCCTTGGTGACA +
Preference number: 4 (lower is better)
Translates to: PASSSDCKVVTSNSERLQLRSHY*TPALVT
Trigger: TGTCACCAAGGCTGGAGTGCAGTAGTGTGATCTCAG...CTGGAGCCTCTCTGAATTGCTGGTGACCACTTTGCAGTCTGAGGAAGACGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp GCCGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCTCTCATTCCGGTAAACGGCTCTCCTTTAGCCTaGAGAATGTGGGTATATCTT +
Preference number: 4 (lower is better)
Translates to: AVFPPWVVQVFLALIPVNGSPLA*RMWVYL
Trigger: AAGATATACCCACATTCTGCAGGCTAAAGGAGAGCC...GTTTACCGGAATGAGAGCAAGGAACACCTGGACCACCCAGGGCGGGAAAACGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp CGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCTCTCATTCCGGTAAACCTAGTACCAACTTAGCCTaGTGCTGCAAAGACGAAGGA +
Preference number: 4 (lower is better)
Translates to: RFPALGGPGVPCSHSGKPSTNLA*CCKDEG
Trigger: TCCTTCGTCTTTGCAGCAGCAGGCTAAGTTGGTACT...AGGTTTACCGGAATGAGAGCAAGGAACACCTGGACCACCCAGGGCGGGAAAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp CAGCTTGGTCATGGAGACCCTAACCCAGAGGCGCTAGAGAAATTAAAGACACACCAGCAAACAAGCCTCTaGGATTACAGACGTCCGCGG +
Preference number: 4 (lower is better)
Translates to: QLGHGDPNPEALEKLKTHQQTSL*DYRRPR
Trigger: CCGCGGACGTCTGTAATCTCAGAGGCTTGTTTGCTG...GTGTGTCTTTAATTTCTCTAGCGCCTCTGGGTTAGGGTCTCCATGACCAAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259470.6
ENST00000680385.1
ENST00000681927.1
CDS-3UTR TCA 90 bp AGGGGACTCACAGCTTTCAGAGCTGAGAGCCCCGAACAGAGATTTACCCATGTTGCCTTGGTGACAGAGTaGGAGAGACTCCGTCTCATA +
Preference number: 4 (lower is better)
Translates to: RGLTAFRAESPEQRFTHVALVTE*ERLRLI
Trigger: TATGAGACGGAGTCTCTCTCACTCTGTCACCAAGGC...AACATGGGTAAATCTCTGTTCGGGGCTCTCAGCTCTGAAAGCTGTGAGTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp TCCTTAGAGCCTGGGTTGTTGTTCCAAGAATCTGTGGAGAGTACCAACTTAGCCGCACTCCAGCCTTGGTaGCAGAGTGAGAGAGACTCC +
Preference number: 4 (lower is better)
Translates to: SLEPGLLFQESVESTNLAALQPW*QSERDS
Trigger: GGAGTCTCTCTCACTCTGTCACCAAGGCTGGAGTGC...GGCTAAGTTGGTACTCTCCACAGATTCTTGGAACAACAACCCAGGCTCTAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp CGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCTCTCATTCCGGTAAACCTCATGATCCAGGTTTTTaGTGCTGCAGTCTGGTTCAA +
Preference number: 4 (lower is better)
Translates to: RFPALGGPGVPCSHSGKPHDPGF*CCSLVQ
Trigger: TTGAACCAGACTGCAGCAGCAAAAACCTGGATCATG...AGGTTTACCGGAATGAGAGCAAGGAACACCTGGACCACCCAGGGCGGGAAAACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp AGGGGACTCACAGCTTTCAGAGCTGAGAGCCCCGAACAGAGATTTACCCATGTTATACACAGTCCCACATaGCCCTTCCCTCCCATTGCA +
Preference number: 4 (lower is better)
Translates to: RGLTAFRAESPEQRFTHVIHSPT*PFPPIA
Trigger: TGCAATGGGAGGGAAGGGGCATGTGGGACTGTGTAT...AACATGGGTAAATCTCTGTTCGGGGCTCTCAGCTCTGAAAGCTGTGAGTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp CGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCTCTCATTCCGGTAAACCTCCCTTCCTGAATTTCTaGTTTCGAAAGCAACCCATC +
Preference number: 4 (lower is better)
Translates to: RFPALGGPGVPCSHSGKPPFLNF*FRKQPI
Trigger: GATGGGTTGCTTTCGAAACCAGAAATTCAGGAAGGG...AGGTTTACCGGAATGAGAGCAAGGAACACCTGGACCACCCAGGGCGGGAAAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259470.6
ENST00000680385.1
ENST00000681927.1
CDS-3UTR TCA 90 bp AGGGGACTCACAGCTTTCAGAGCTGAGAGCCCCGAACAGAGATTTACCCATGTTGACCCCAGCTGTTTTTaGCGAGCCAATACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: RGLTAFRAESPEQRFTHVDPSCF*RANTCC
Trigger: ACAGCAAGTATTGGCTCGTCAAAAACAGCTGGGGTC...AACATGGGTAAATCTCTGTTCGGGGCTCTCAGCTCTGAAAGCTGTGAGTCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp TACACAGTCCCACATGCCCCTTCCCTCCCATTGCATTCACAATGGATCACCTTTGCCTTGGTGACAGAGTaGGAGAGACTCCGTCTCATA +
Preference number: 4 (lower is better)
Translates to: YTVPHAPSLPLHSQWITFALVTE*ERLRLI
Trigger: TATGAGACGGAGTCTCTCTCACTCTGTCACCAAGGC...AAAGGTGATCCATTGTGAATGCAATGGGAGGGAAGGGGCATGTGGGACTGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp GATGTTTCCTTAGAGCCTGGGTTGTTGTTCCAAGAATCTGTGGAGAGTACCAACGCACTCCAGCCTTGGTaGCAGAGTGAGAGAGACTCC +
Preference number: 4 (lower is better)
Translates to: DVSLEPGLLFQESVESTNALQPW*QSERDS
Trigger: GGAGTCTCTCTCACTCTGTCACCAAGGCTGGAGTGC...GTTGGTACTCTCCACAGATTCTTGGAACAACAACCCAGGCTCTAAGGAAACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp GCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTAGCAGCCGTCGCAGCTaGGCAGGCACCCTCAGCAAA +
Preference number: 4 (lower is better)
Translates to: AFGQFQDKISPDMLSLSPSSRRS*AGTLSK
Trigger: TTTGCTGAGGGTGCCTGCGCAGCTGCGACGGCTGCT...AGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259470.6
ENST00000680221.1
ENST00000680385.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR GCA 90 bp CAGCTTGGTCATGGAGACCCTAACCCAGAGGCGCTAGAGAAATTAAAGACACACCATTGCAGCCCTGATTaGCTTGAGGACGCGAACAGT +
Preference number: 4 (lower is better)
Translates to: QLGHGDPNPEALEKLKTHHCSPD*LEDANS
Trigger: ACTGTTCGCGTCCTCAAGGCAATCAGGGCTGCAATG...GTGTGTCTTTAATTTCTCTAGCGCCTCTGGGTTAGGGTCTCCATGACCAAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000681927.1
CDS-3UTR GCA 90 bp CCTGCGTCTTCCTCAGACTGCAAAGTGGTCACCAGCAATTCAGAGAGGCTCCAGGGCTCTCCTTTAGCCTaGAGAATGTGGGTATATCTT +
Preference number: 4 (lower is better)
Translates to: PASSSDCKVVTSNSERLQGSPLA*RMWVYL
Trigger: AAGATATACCCACATTCTGCAGGCTAAAGGAGAGCC...CTGGAGCCTCTCTGAATTGCTGGTGACCACTTTGCAGTCTGAGGAAGACGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp CGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCTCTCATTCCGGTAAACCTTGTGTTGCCTTCCACTaGTACCACTTTGTATCCAAA +
Preference number: 4 (lower is better)
Translates to: RFPALGGPGVPCSHSGKPCVAFH*YHFVSK
Trigger: TTTGGATACAAAGTGGTACCAGTGGAAGGCAACACA...AGGTTTACCGGAATGAGAGCAAGGAACACCTGGACCACCCAGGGCGGGAAAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp CGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCTCTCATTCCGGTAAACCTCAGCCTCATCTCTTGTaGACCTTGAACAAATTTCTC +
Preference number: 4 (lower is better)
Translates to: RFPALGGPGVPCSHSGKPQPHLL*TLNKFL
Trigger: GAGAAATTTGTTCAAGGTCCACAAGAGATGAGGCTG...AGGTTTACCGGAATGAGAGCAAGGAACACCTGGACCACCCAGGGCGGGAAAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp GCCGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCTCTCATTCCGGTAAACCAGAGATTTTGTTTATaGCCAGATTTGGGGGCATAT +
Preference number: 4 (lower is better)
Translates to: AVFPPWVVQVFLALIPVNQRFCL*PDLGAY
Trigger: ATATGCCCCCAAATCTGGCCATAAACAAAATCTCTG...GTTTACCGGAATGAGAGCAAGGAACACCTGGACCACCCAGGGCGGGAAAACGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp TTACACAATAAGCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCCTGTCCCTCGGTCTaGTCGGGGGCGCTCACCAGC +
Preference number: 4 (lower is better)
Translates to: LHNKRLVSFKIKFPQTCCPCPSV*SGALTS
Trigger: GCTGGTGAGCGCCCCCGACCAGACCGAGGGACAGGG...ACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGCTTATTGTGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000680787.1
ENST00000681737.1
CDS-3UTR TCA 90 bp CAGCTTGGTCATGGAGACCCTAACCCAGAGGCGCTAGAGAAATTAAAGACACACGACCCCAGCTGTTTTTaGCGAGCCAATACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: QLGHGDPNPEALEKLKTHDPSCF*RANTCC
Trigger: ACAGCAAGTATTGGCTCGTCAAAAACAGCTGGGGTC...GTGTGTCTTTAATTTCTCTAGCGCCTCTGGGTTAGGGTCTCCATGACCAAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp CCTGCGTCTTCCTCAGACTGCAAAGTGGTCACCAGCAATTCAGAGAGGCTCCAGATCTCTTGTGGACCTTaGACAAATTTCTCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: PASSSDCKVVTSNSERLQISCGP*TNFSSY
Trigger: GTAGCTGGAGAAATTTGTTCAAGGTCCACAAGAGAT...CTGGAGCCTCTCTGAATTGCTGGTGACCACTTTGCAGTCTGAGGAAGACGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp TTAGGAACGCCTTTAAGCCGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCGTCTACTGGCTTGTTTaGAAAACGCTTTTAGACAAC +
Preference number: 4 (lower is better)
Translates to: LGTPLSRFPALGGPGVPCVYWLV*KTLLDN
Trigger: GTTGTCTAAAAGCGTTTTTCAAACAAGCCAGTAGAC...GCAAGGAACACCTGGACCACCCAGGGCGGGAAAACGGCTTAAAGGCGTTCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp TTGGGATACACAGTCCCACATGCCCCTTCCCTCCCATTGCATTCACAATGGATCGGCAAAACATACACATaGACCACACATAGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: LGYTVPHAPSLPLHSQWIGKTYT*TTHRAE
Trigger: CTCAGCCCTATGTGTGGTTCATGTGTATGTTTTGCC...GATCCATTGTGAATGCAATGGGAGGGAAGGGGCATGTGGGACTGTGTATCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp GATCTCTCAGACTTAACAAAGAACCAGCAGAGGCAGATGTTTCTGCTTACTATTAGCAGCCGTCGCAGCTaGGCAGGCACCCTCAGCAAA +
Preference number: 4 (lower is better)
Translates to: DLSDLTKNQQRQMFLLTISSRRS*AGTLSK
Trigger: TTTGCTGAGGGTGCCTGCGCAGCTGCGACGGCTGCT...AATAGTAAGCAGAAACATCTGCCTCTGCTGGTTCTTTGTTAAGTCTGAGAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681330.1
CDS-3UTR GCA 90 bp TCCTTAGAGCCTGGGTTGTTGTTCCAAGAATCTGTGGAGAGTACCAACTTAGCCCATTGCAGCCCTGATTaGCTTGAGGACGCGAACAGT +
Preference number: 4 (lower is better)
Translates to: SLEPGLLFQESVESTNLAHCSPD*LEDANS
Trigger: ACTGTTCGCGTCCTCAAGGCAATCAGGGCTGCAATG...GGCTAAGTTGGTACTCTCCACAGATTCTTGGAACAACAACCCAGGCTCTAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TCCTTAGAGCCTGGGTTGTTGTTCCAAGAATCTGTGGAGAGTACCAACTTAGCCCTTCTCCTTTCCAGGTaGGACCACTGTGAAGCCAGT +
Preference number: 4 (lower is better)
Translates to: SLEPGLLFQESVESTNLALLLSR*DHCEAS
Trigger: ACTGGCTTCACAGTGGTCGCACCTGGAAAGGAGAAG...GGCTAAGTTGGTACTCTCCACAGATTCTTGGAACAACAACCCAGGCTCTAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp CCTGCGTCTTCCTCAGACTGCAAAGTGGTCACCAGCAATTCAGAGAGGCTCCAGGATCCAGGTTTTTGCTaGTGCAGTCTGGTTCAAAAT +
Preference number: 4 (lower is better)
Translates to: PASSSDCKVVTSNSERLQDPGFC*CSLVQN
Trigger: ATTTTGAACCAGACTGCAGCAGCAAAAACCTGGATC...CTGGAGCCTCTCTGAATTGCTGGTGACCACTTTGCAGTCTGAGGAAGACGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TCCTTAGAGCCTGGGTTGTTGTTCCAAGAATCTGTGGAGAGTACCAACTTAGCCGCTGAGGCAGAGAATTaGTTAAACCCGGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SLEPGLLFQESVESTNLAAEAEN*LNPGGR
Trigger: TCTGCCTCCCGGGTTTAAGCAATTCTCTGCCTCAGC...GGCTAAGTTGGTACTCTCCACAGATTCTTGGAACAACAACCCAGGCTCTAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TACACAGTCCCACATGCCCCTTCCCTCCCATTGCATTCACAATGGATCACCTTTCCCCTTCCCTCCCATTaGATTCACAATGGATCACCT +
Preference number: 4 (lower is better)
Translates to: YTVPHAPSLPLHSQWITFPLPSH*IHNGSP
Trigger: AGGTGATCCATTGTGAATGCAATGGGAGGGAAGGGG...AAAGGTGATCCATTGTGAATGCAATGGGAGGGAAGGGGCATGTGGGACTGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp AGGGGACTCACAGCTTTCAGAGCTGAGAGCCCCGAACAGAGATTTACCCATGTTACCAACTTAGCCTGCTaGTGCAAAGACGAAGGAATC +
Preference number: 4 (lower is better)
Translates to: RGLTAFRAESPEQRFTHVTNLAC*CKDEGI
Trigger: GATTCCTTCGTCTTTGCAGCAGCAGGCTAAGTTGGT...AACATGGGTAAATCTCTGTTCGGGGCTCTCAGCTCTGAAAGCTGTGAGTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TTGGGATACACAGTCCCACATGCCCCTTCCCTCCCATTGCATTCACAATGGATCACCAACTTAGCCTGCTaGTGCAAAGACGAAGGAATC +
Preference number: 4 (lower is better)
Translates to: LGYTVPHAPSLPLHSQWITNLAC*CKDEGI
Trigger: GATTCCTTCGTCTTTGCAGCAGCAGGCTAAGTTGGT...GATCCATTGTGAATGCAATGGGAGGGAAGGGGCATGTGGGACTGTGTATCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp TTGGGATACACAGTCCCACATGCCCCTTCCCTCCCATTGCATTCACAATGGATCTTCTCCTTGACATACTaGAAGGCCCTAGCCATGAAG +
Preference number: 4 (lower is better)
Translates to: LGYTVPHAPSLPLHSQWIFSLTY*KALAMK
Trigger: CTTCATGGCTAGGGCCTTCCAGTATGTCAAGGAGAA...GATCCATTGTGAATGCAATGGGAGGGAAGGGGCATGTGGGACTGTGTATCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000681927.1
CDS-3UTR CCA 90 bp TACACAGTCCCACATGCCCCTTCCCTCCCATTGCATTCACAATGGATCACCTTTAACTGGAAGGACGAATaGCCTGCATCCATAGCAACG +
Preference number: 4 (lower is better)
Translates to: YTVPHAPSLPLHSQWITFNWKDE*PASIAT
Trigger: CGTTGCTATGGATGCAGGCCATTCGTCCTTCCAGTT...AAAGGTGATCCATTGTGAATGCAATGGGAGGGAAGGGGCATGTGGGACTGTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp TTGGGATACACAGTCCCACATGCCCCTTCCCTCCCATTGCATTCACAATGGATCCCTCAGACTGCAAAGTaGTCACCAGCAATTCAGAGA +
Preference number: 4 (lower is better)
Translates to: LGYTVPHAPSLPLHSQWIPQTAK*SPAIQR
Trigger: TCTCTGAATTGCTGGTGACCACTTTGCAGTCTGAGG...GATCCATTGTGAATGCAATGGGAGGGAAGGGGCATGTGGGACTGTGTATCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp TTAGGAACGCCTTTAAGCCGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCCAGAGATTTTGTTTATaGCCAGATTTGGGGGCATAT +
Preference number: 4 (lower is better)
Translates to: LGTPLSRFPALGGPGVPCQRFCL*PDLGAY
Trigger: ATATGCCCCCAAATCTGGCCATAAACAAAATCTCTG...GCAAGGAACACCTGGACCACCCAGGGCGGGAAAACGGCTTAAAGGCGTTCCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp TTAGGAACGCCTTTAAGCCGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCTGCTGTGTGATGTTTTaGTCAGTGACTGCATATATG +
Preference number: 4 (lower is better)
Translates to: LGTPLSRFPALGGPGVPCCCVMF*SVTAYM
Trigger: CATATATGCAGTCACTGACCAAAACATCACACAGCA...GCAAGGAACACCTGGACCACCCAGGGCGGGAAAACGGCTTAAAGGCGTTCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp GCCCAGCCTCATCTCTTGTGGACCTTGAACAAATTTCTCCAGCTACTGTCAAATAGGCAGAGGTTGCAGTaGGCTGAGATCACACTACTG +
Preference number: 4 (lower is better)
Translates to: AQPHLLWTLNKFLQLLSNRQRLQ*AEITLL
Trigger: CAGTAGTGTGATCTCAGCTCACTGCAACCTCTGCCT...ATTTGACAGTAGCTGGAGAAATTTGTTCAAGGTCCACAAGAGATGAGGCTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp TTAGGAACGCCTTTAAGCCGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCTTTACCCATGTTTATTaGCAGCAAGCCAGTGATAAA +
Preference number: 4 (lower is better)
Translates to: LGTPLSRFPALGGPGVPCFTHVY*QQASDK
Trigger: TTTATCACTGGCTTGCTGTCAATAAACATGGGTAAA...GCAAGGAACACCTGGACCACCCAGGGCGGGAAAACGGCTTAAAGGCGTTCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp TACACAGTCCCACATGCCCCTTCCCTCCCATTGCATTCACAATGGATCACCTTTGGCAAAACATACACATaGACCACACATAGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: YTVPHAPSLPLHSQWITFGKTYT*TTHRAE
Trigger: CTCAGCCCTATGTGTGGTTCATGTGTATGTTTTGCC...AAAGGTGATCCATTGTGAATGCAATGGGAGGGAAGGGGCATGTGGGACTGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp ACAATTGAGATATCCATACACACAAGTCATGTGCTGTGTGATGTTTTGGTCAGTAGCAGCCGTCGCAGCTaGGCAGGCACCCTCAGCAAA +
Preference number: 4 (lower is better)
Translates to: TIEISIHTSHVLCDVLVSSSRRS*AGTLSK
Trigger: TTTGCTGAGGGTGCCTGCGCAGCTGCGACGGCTGCT...ACTGACCAAAACATCACACAGCACATGACTTGTGTGTATGGATATCTCAATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259470.6
ENST00000680385.1
ENST00000681927.1
CDS-3UTR GCA 90 bp GAGTCTGGCCTAGTGACTTCTGACCTTTCACTTGTGATCTCTTATCCATCTTCGCATTGCAGCCCTGATTaGCTTGAGGACGCGAACAGT +
Preference number: 4 (lower is better)
Translates to: ESGLVTSDLSLVISYPSSHCSPD*LEDANS
Trigger: ACTGTTCGCGTCCTCAAGGCAATCAGGGCTGCAATG...CGAAGATGGATAAGAGATCACAAGTGAAAGGTCAGAAGTCACTAGGCCAGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000681927.1
CDS-3UTR GCA 90 bp GATGTTTCCTTAGAGCCTGGGTTGTTGTTCCAAGAATCTGTGGAGAGTACCAACCTTCTCCTTTCCAGGTaGGACCACTGTGAAGCCAGT +
Preference number: 4 (lower is better)
Translates to: DVSLEPGLLFQESVESTNLLLSR*DHCEAS
Trigger: ACTGGCTTCACAGTGGTCGCACCTGGAAAGGAGAAG...GTTGGTACTCTCCACAGATTCTTGGAACAACAACCCAGGCTCTAAGGAAACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp CCAGATTTGGGGGCATATCCCCAGCAAATATTGGTTAAGTCTGTGCTTCAGACTCTTCTCCTTTCCAGGTaGGACCACTGTGAAGCCAGT +
Preference number: 4 (lower is better)
Translates to: PDLGAYPQQILVKSVLQTLLLSR*DHCEAS
Trigger: ACTGGCTTCACAGTGGTCGCACCTGGAAAGGAGAAG...AGTCTGAAGCACAGACTTAACCAATATTTGCTGGGGATATGCCCCCAAATCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TCCTTAGAGCCTGGGTTGTTGTTCCAAGAATCTGTGGAGAGTACCAACTTAGCCGAAGGACGAATGGCCTaGATCCATAGCAACGGAGAT +
Preference number: 4 (lower is better)
Translates to: SLEPGLLFQESVESTNLAEGRMA*IHSNGD
Trigger: ATCTCCGTTGCTATGGATGCAGGCCATTCGTCCTTC...GGCTAAGTTGGTACTCTCCACAGATTCTTGGAACAACAACCCAGGCTCTAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TTGGGATACACAGTCCCACATGCCCCTTCCCTCCCATTGCATTCACAATGGATCCATGATCCAGGTTTTTaGTGCTGCAGTCTGGTTCAA +
Preference number: 4 (lower is better)
Translates to: LGYTVPHAPSLPLHSQWIHDPGF*CCSLVQ
Trigger: TTGAACCAGACTGCAGCAGCAAAAACCTGGATCATG...GATCCATTGTGAATGCAATGGGAGGGAAGGGGCATGTGGGACTGTGTATCCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp GCCCAGCCTCATCTCTTGTGGACCTTGAACAAATTTCTCCAGCTACTGTCAAATGCTGAGGCAGAGAATTaGTTAAACCCGGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: AQPHLLWTLNKFLQLLSNAEAEN*LNPGGR
Trigger: TCTGCCTCCCGGGTTTAAGCAATTCTCTGCCTCAGC...ATTTGACAGTAGCTGGAGAAATTTGTTCAAGGTCCACAAGAGATGAGGCTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TCCTTAGAGCCTGGGTTGTTGTTCCAAGAATCTGTGGAGAGTACCAACTTAGCCGCGTCTTCCTCAGACTaGAAAGTGGTCACCAGCAAT +
Preference number: 4 (lower is better)
Translates to: SLEPGLLFQESVESTNLAASSSD*KVVTSN
Trigger: ATTGCTGGTGACCACTTTGCAGTCTGAGGAAGACGC...GGCTAAGTTGGTACTCTCCACAGATTCTTGGAACAACAACCCAGGCTCTAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp CGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCTCTCATTCCGGTAAACCTTCCTCCCTCTTAATATaGTCAGTGATTTCTATCTCA +
Preference number: 4 (lower is better)
Translates to: RFPALGGPGVPCSHSGKPSSLLI*SVISIS
Trigger: TGAGATAGAAATCACTGAGCATATTAAGAGGGAGGA...AGGTTTACCGGAATGAGAGCAAGGAACACCTGGACCACCCAGGGCGGGAAAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TTAGGAACGCCTTTAAGCCGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCCAGATTTCATCGGTTTaGAGATGTAGATTCTACCAT +
Preference number: 4 (lower is better)
Translates to: LGTPLSRFPALGGPGVPCQISSV*RCRFYH
Trigger: ATGGTAGAATCTACATCTGCAAACCGATGAAATCTG...GCAAGGAACACCTGGACCACCCAGGGCGGGAAAACGGCTTAAAGGCGTTCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680385.1
CDS-3UTR CCA 90 bp CAGCTTGGTCATGGAGACCCTAACCCAGAGGCGCTAGAGAAATTAAAGACACACTTCTCCTTGACATACTaGAAGGCCCTAGCCATGAAG +
Preference number: 4 (lower is better)
Translates to: QLGHGDPNPEALEKLKTHFSLTY*KALAMK
Trigger: CTTCATGGCTAGGGCCTTCCAGTATGTCAAGGAGAA...GTGTGTCTTTAATTTCTCTAGCGCCTCTGGGTTAGGGTCTCCATGACCAAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000681927.1
CDS-3UTR CCA 90 bp TTGGGATACACAGTCCCACATGCCCCTTCCCTCCCATTGCATTCACAATGGATCGGTAGATTCAGGAGTTaGGTAACACACAGTAACTGG +
Preference number: 4 (lower is better)
Translates to: LGYTVPHAPSLPLHSQWIGRFRS*VTHSNW
Trigger: CCAGTTACTGTGTGTTACCCAACTCCTGAATCTACC...GATCCATTGTGAATGCAATGGGAGGGAAGGGGCATGTGGGACTGTGTATCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp CCTGCGTCTTCCTCAGACTGCAAAGTGGTCACCAGCAATTCAGAGAGGCTCCAGCAGAGATTTTGTTTATaGCCAGATTTGGGGGCATAT +
Preference number: 4 (lower is better)
Translates to: PASSSDCKVVTSNSERLQQRFCL*PDLGAY
Trigger: ATATGCCCCCAAATCTGGCCATAAACAAAATCTCTG...CTGGAGCCTCTCTGAATTGCTGGTGACCACTTTGCAGTCTGAGGAAGACGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp GCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTCAGCAAACAAGCCTCTaGGATTACAGACGTCCGCGG +
Preference number: 4 (lower is better)
Translates to: AFGQFQDKISPDMLSLSPQQTSL*DYRRPR
Trigger: CCGCGGACGTCTGTAATCTCAGAGGCTTGTTTGCTG...AGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259470.6
ENST00000680221.1
ENST00000680385.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR TCA 90 bp GAGTCTGGCCTAGTGACTTCTGACCTTTCACTTGTGATCTCTTATCCATCTTCGGAACCACACTGTTTCTaGTTCTTCACTGGCGTCACG +
Preference number: 4 (lower is better)
Translates to: ESGLVTSDLSLVISYPSSEPHCF*FFTGVT
Trigger: CGTGACGCCAGTGAAGAATCAGAAACAGTGTGGTTC...CGAAGATGGATAAGAGATCACAAGTGAAAGGTCAGAAGTCACTAGGCCAGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259470.6
ENST00000680385.1
ENST00000681927.1
CDS-3UTR TCA 90 bp TCTGACCTTTCACTTGTGATCTCTTATCCATCTTCGGCCAGAGGCCTCTTTTTGGAACCACACTGTTTCTaGTTCTTCACTGGCGTCACG +
Preference number: 4 (lower is better)
Translates to: SDLSLVISYPSSARGLFLEPHCF*FFTGVT
Trigger: CGTGACGCCAGTGAAGAATCAGAAACAGTGTGGTTC...CAAAAAGAGGCCTCTGGCCGAAGATGGATAAGAGATCACAAGTGAAAGGTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259470.6
ENST00000680385.1
ENST00000681927.1
CDS-3UTR TCA 90 bp TCTGACCTTTCACTTGTGATCTCTTATCCATCTTCGGCCAGAGGCCTCTTTTTGACCACCAGAACACCATaGTCCAGGTTTTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SDLSLVISYPSSARGLFLTTRTP*SRFLLL
Trigger: CAGCAGCAAAAACCTGGATCATGGTGTTCTGGTGGT...CAAAAAGAGGCCTCTGGCCGAAGATGGATAAGAGATCACAAGTGAAAGGTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp GGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTTCCTCCGCCTTGGTGACAGAGTaGGAGAGACTCCGTCTCATA +
Preference number: 4 (lower is better)
Translates to: GQFQDKISPDMLSLSPSSALVTE*ERLRLI
Trigger: TATGAGACGGAGTCTCTCTCACTCTGTCACCAAGGC...GGAGGAAGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp GCCCAGCCTCATCTCTTGTGGACCTTGAACAAATTTCTCCAGCTACTGTCAAATGCCTGGCCAAGATGGTaGAACCCTCTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: AQPHLLWTLNKFLQLLSNAWPRW*NPLSTK
Trigger: TTTAGTAGAGAGAGGGTTTCACCATCTTGGCCAGGC...ATTTGACAGTAGCTGGAGAAATTTGTTCAAGGTCCACAAGAGATGAGGCTGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp AGGGGACTCACAGCTTTCAGAGCTGAGAGCCCCGAACAGAGATTTACCCATGTTCTACTGTCAAATGCCTaGGATTTGTTAACCACACCA +
Preference number: 4 (lower is better)
Translates to: RGLTAFRAESPEQRFTHVLLSNA*DLLTTP
Trigger: TGGTGTGGTTAACAAATCTCAGGCATTTGACAGTAG...AACATGGGTAAATCTCTGTTCGGGGCTCTCAGCTCTGAAAGCTGTGAGTCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp TACACAGTCCCACATGCCCCTTCCCTCCCATTGCATTCACAATGGATCACCTTTCTGACCTTTCACTTGTaGTCTCTTATCCATCTTCGG +
Preference number: 4 (lower is better)
Translates to: YTVPHAPSLPLHSQWITFLTFHL*SLIHLR
Trigger: CCGAAGATGGATAAGAGATCACAAGTGAAAGGTCAG...AAAGGTGATCCATTGTGAATGCAATGGGAGGGAAGGGGCATGTGGGACTGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp CTGTGCTTCAGACTAGATTTTTCAAGTCTACTGGCTTGTTTGAAAAACGCTTTTAGCAGCCGTCGCAGCTaGGCAGGCACCCTCAGCAAA +
Preference number: 4 (lower is better)
Translates to: LCFRLDFSSLLACLKNAFSSRRS*AGTLSK
Trigger: TTTGCTGAGGGTGCCTGCGCAGCTGCGACGGCTGCT...AAAAGCGTTTTTCAAACAAGCCAGTAGACTTGAAAAATCTAGTCTGAAGCACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000259470.6
ENST00000680385.1
ENST00000681927.1
CDS-3UTR GCA 90 bp GAGTCTGGCCTAGTGACTTCTGACCTTTCACTTGTGATCTCTTATCCATCTTCGCAGTCCACCAGATTCTaGTCGCTCAGTGAGACAAGT +
Preference number: 4 (lower is better)
Translates to: ESGLVTSDLSLVISYPSSQSTRF*SLSETS
Trigger: ACTTGTCTCACTGAGCGAGCAGAATCTGGTGGACTG...CGAAGATGGATAAGAGATCACAAGTGAAAGGTCAGAAGTCACTAGGCCAGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000681927.1
CDS-3UTR GCA 90 bp GGTTGTTCTTGTCTTTGGCTATTTTTACATAGCCATTCGAGCCCCATTCTGGACCTTCTCCTTTCCAGGTaGGACCACTGTGAAGCCAGT +
Preference number: 4 (lower is better)
Translates to: GCSCLWLFLHSHSSPILDLLLSR*DHCEAS
Trigger: ACTGGCTTCACAGTGGTCGCACCTGGAAAGGAGAAG...GTCCAGAATGGGGCTCGAATGGCTATGTAAAAATAGCCAAAGACAAGAACAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680385.1
ENST00000680787.1
CDS-3UTR GCA 90 bp TCTGACCTTTCACTTGTGATCTCTTATCCATCTTCGGCCAGAGGCCTCTTTTTGGAAGGACGAATGGCCTaGATCCATAGCAACGGAGAT +
Preference number: 4 (lower is better)
Translates to: SDLSLVISYPSSARGLFLEGRMA*IHSNGD
Trigger: ATCTCCGTTGCTATGGATGCAGGCCATTCGTCCTTC...CAAAAAGAGGCCTCTGGCCGAAGATGGATAAGAGATCACAAGTGAAAGGTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp CGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCTCTCATTCCGGTAAACCTCTGGTTCAAAATAAATaGCTGATTTGTAGAACTGGA +
Preference number: 4 (lower is better)
Translates to: RFPALGGPGVPCSHSGKPLVQNK*LICRTG
Trigger: TCCAGTTCTACAAATCAGGCATTTATTTTGAACCAG...AGGTTTACCGGAATGAGAGCAAGGAACACCTGGACCACCCAGGGCGGGAAAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp AGGGGACTCACAGCTTTCAGAGCTGAGAGCCCCGAACAGAGATTTACCCATGTTGATCCAGGTTTTTGCTaGTGCAGTCTGGTTCAAAAT +
Preference number: 4 (lower is better)
Translates to: RGLTAFRAESPEQRFTHVDPGFC*CSLVQN
Trigger: ATTTTGAACCAGACTGCAGCAGCAAAAACCTGGATC...AACATGGGTAAATCTCTGTTCGGGGCTCTCAGCTCTGAAAGCTGTGAGTCCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TACACAGTCCCACATGCCCCTTCCCTCCCATTGCATTCACAATGGATCACCTTTCATGATCCAGGTTTTTaGTGCTGCAGTCTGGTTCAA +
Preference number: 4 (lower is better)
Translates to: YTVPHAPSLPLHSQWITFHDPGF*CCSLVQ
Trigger: TTGAACCAGACTGCAGCAGCAAAAACCTGGATCATG...AAAGGTGATCCATTGTGAATGCAATGGGAGGGAAGGGGCATGTGGGACTGTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TACACAGTCCCACATGCCCCTTCCCTCCCATTGCATTCACAATGGATCACCTTTGCTGTTATTCGAATTTaGTCCTTCAAAGCCGTAGCC +
Preference number: 4 (lower is better)
Translates to: YTVPHAPSLPLHSQWITFAVIRI*SFKAVA
Trigger: GGCTACGGCTTTGAAGGAGCAAATTCGAATAACAGC...AAAGGTGATCCATTGTGAATGCAATGGGAGGGAAGGGGCATGTGGGACTGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TCTGACCTTTCACTTGTGATCTCTTATCCATCTTCGGCCAGAGGCCTCTTTTTGCTGAGATCACACTACTaGACTCCAGCCTTGGTGACA +
Preference number: 4 (lower is better)
Translates to: SDLSLVISYPSSARGLFLLRSHY*TPALVT
Trigger: TGTCACCAAGGCTGGAGTGCAGTAGTGTGATCTCAG...CAAAAAGAGGCCTCTGGCCGAAGATGGATAAGAGATCACAAGTGAAAGGTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp AACAAAATACCCTTGGTAACTTACTTGCACCTGCGTCTTCCTCAGACTGCAAAGGCTGAGGCAGAGAATTaGTTAAACCCGGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: NKIPLVTYLHLRLPQTAKAEAEN*LNPGGR
Trigger: TCTGCCTCCCGGGTTTAAGCAATTCTCTGCCTCAGC...CTTTGCAGTCTGAGGAAGACGCAGGTGCAAGTAAGTTACCAAGGGTATTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp GAGTCTGGCCTAGTGACTTCTGACCTTTCACTTGTGATCTCTTATCCATCTTCGGCGTCTTCCTCAGACTaGAAAGTGGTCACCAGCAAT +
Preference number: 4 (lower is better)
Translates to: ESGLVTSDLSLVISYPSSASSSD*KVVTSN
Trigger: ATTGCTGGTGACCACTTTGCAGTCTGAGGAAGACGC...CGAAGATGGATAAGAGATCACAAGTGAAAGGTCAGAAGTCACTAGGCCAGACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TTGGGATACACAGTCCCACATGCCCCTTCCCTCCCATTGCATTCACAATGGATCGTTTTGGTCAGTGACTaGATATATGATAGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: LGYTVPHAPSLPLHSQWIVLVSD*IYDSGP
Trigger: GGGACCACTATCATATATGCAGTCACTGACCAAAAC...GATCCATTGTGAATGCAATGGGAGGGAAGGGGCATGTGGGACTGTGTATCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp TTGGGATACACAGTCCCACATGCCCCTTCCCTCCCATTGCATTCACAATGGATCATCCACTGCTACATATaGATAGGATTCCTCAGAGTC +
Preference number: 4 (lower is better)
Translates to: LGYTVPHAPSLPLHSQWIIHCYI*IGFLRV
Trigger: GACTCTGAGGAATCCTATCCATATGTAGCAGTGGAT...GATCCATTGTGAATGCAATGGGAGGGAAGGGGCATGTGGGACTGTGTATCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000681927.1
CDS-3UTR CCA 90 bp CCTGCGTCTTCCTCAGACTGCAAAGTGGTCACCAGCAATTCAGAGAGGCTCCAGATTCACCCACAAGTTTaGTGTACTTTCTTCCAGTAT +
Preference number: 4 (lower is better)
Translates to: PASSSDCKVVTSNSERLQIHPQV*CTFFQY
Trigger: ATACTGGAAGAAAGTACACCAAACTTGTGGGTGAAT...CTGGAGCCTCTCTGAATTGCTGGTGACCACTTTGCAGTCTGAGGAAGACGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp TTGGGATACACAGTCCCACATGCCCCTTCCCTCCCATTGCATTCACAATGGATCTGTTTCCTTAGAGCCTaGGTTGTTGTTCCAAGAATC +
Preference number: 4 (lower is better)
Translates to: LGYTVPHAPSLPLHSQWICFLRA*VVVPRI
Trigger: GATTCTTGGAACAACAACCCAGGCTCTAAGGAAACA...GATCCATTGTGAATGCAATGGGAGGGAAGGGGCATGTGGGACTGTGTATCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp GATCTCTCAGACTTAACAAAGAACCAGCAGAGGCAGATGTTTCTGCTTACTATTCAGCAAACAAGCCTCTaGGATTACAGACGTCCGCGG +
Preference number: 4 (lower is better)
Translates to: DLSDLTKNQQRQMFLLTIQQTSL*DYRRPR
Trigger: CCGCGGACGTCTGTAATCTCAGAGGCTTGTTTGCTG...AATAGTAAGCAGAAACATCTGCCTCTGCTGGTTCTTTGTTAAGTCTGAGAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681330.1
CDS-3UTR TCA 90 bp AACAAAATACCCTTGGTAACTTACTTGCACCTGCGTCTTCCTCAGACTGCAAAGGACCCCAGCTGTTTTTaGCGAGCCAATACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: NKIPLVTYLHLRLPQTAKDPSCF*RANTCC
Trigger: ACAGCAAGTATTGGCTCGTCAAAAACAGCTGGGGTC...CTTTGCAGTCTGAGGAAGACGCAGGTGCAAGTAAGTTACCAAGGGTATTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp TTCTGGACCCCAGCTGTTTTTGACGAGCCAATACTTGCTGTTATTCGAATTTGCGACCCCAGCTGTTTTTaGCGAGCCAATACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: FWTPAVFDEPILAVIRICDPSCF*RANTCC
Trigger: ACAGCAAGTATTGGCTCGTCAAAAACAGCTGGGGTC...GCAAATTCGAATAACAGCAAGTATTGGCTCGTCAAAAACAGCTGGGGTCCAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000680385.1
ENST00000680787.1
CDS-3UTR TCA 90 bp GGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTTCCTCCGACCCCAGCTGTTTTTaGCGAGCCAATACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: GQFQDKISPDMLSLSPSSDPSCF*RANTCC
Trigger: ACAGCAAGTATTGGCTCGTCAAAAACAGCTGGGGTC...GGAGGAAGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR TCA 90 bp TGCAAAGACGAAGGAATCCTTTCTCAGAGAAAACTCAAGACTGAATATGGTAGAGCACTCCAGCCTTGGTaGCAGAGTGAGAGAGACTCC +
Preference number: 4 (lower is better)
Translates to: CKDEGILSQRKLKTEYGRALQPW*QSERDS
Trigger: GGAGTCTCTCTCACTCTGTCACCAAGGCTGGAGTGC...TCTACCATATTCAGTCTTGAGTTTTCTCTGAGAAAGGATTCCTTCGTCTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp ATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTTCAAGCAGCCGTCGCAGCTaGGCAGGCACCCTCAGCAAA +
Preference number: 4 (lower is better)
Translates to: ILNDSTGLSYTISVWSVSSSRRS*AGTLSK
Trigger: TTTGCTGAGGGTGCCTGCGCAGCTGCGACGGCTGCT...TGAAACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259470.6
ENST00000680221.1
ENST00000680385.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR GCA 90 bp GGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTTCCTCCCAGTCCACCAGATTCTaGTCGCTCAGTGAGACAAGT +
Preference number: 4 (lower is better)
Translates to: GQFQDKISPDMLSLSPSSQSTRF*SLSETS
Trigger: ACTTGTCTCACTGAGCGAGCAGAATCTGGTGGACTG...GGAGGAAGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR GCA 90 bp GCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTCATTGCAGCCCTGATTaGCTTGAGGACGCGAACAGT +
Preference number: 4 (lower is better)
Translates to: AFGQFQDKISPDMLSLSPHCSPD*LEDANS
Trigger: ACTGTTCGCGTCCTCAAGGCAATCAGGGCTGCAATG...AGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR GCA 90 bp GCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTCTTCTCCTTTCCAGGTaGGACCACTGTGAAGCCAGT +
Preference number: 4 (lower is better)
Translates to: AFGQFQDKISPDMLSLSPLLLSR*DHCEAS
Trigger: ACTGGCTTCACAGTGGTCGCACCTGGAAAGGAGAAG...AGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR GCA 90 bp GGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTTCCTCCGAAGGACGAATGGCCTaGATCCATAGCAACGGAGAT +
Preference number: 4 (lower is better)
Translates to: GQFQDKISPDMLSLSPSSEGRMA*IHSNGD
Trigger: ATCTCCGTTGCTATGGATGCAGGCCATTCGTCCTTC...GGAGGAAGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR GCA 90 bp CCTGCGTCTTCCTCAGACTGCAAAGTGGTCACCAGCAATTCAGAGAGGCTCCAGCTGGTTCAAAATAAATaGCTGATTTGTAGAACTGGA +
Preference number: 4 (lower is better)
Translates to: PASSSDCKVVTSNSERLQLVQNK*LICRTG
Trigger: TCCAGTTCTACAAATCAGGCATTTATTTTGAACCAG...CTGGAGCCTCTCTGAATTGCTGGTGACCACTTTGCAGTCTGAGGAAGACGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TTGGGATACACAGTCCCACATGCCCCTTCCCTCCCATTGCATTCACAATGGATCCCAGGTTTTTGCTGCTaGAGTCTGGTTCAAAATAAA +
Preference number: 4 (lower is better)
Translates to: LGYTVPHAPSLPLHSQWIPGFCC*SLVQNK
Trigger: TTTATTTTGAACCAGACTGCAGCAGCAAAAACCTGG...GATCCATTGTGAATGCAATGGGAGGGAAGGGGCATGTGGGACTGTGTATCCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp AATTCTTCATTGGTCCAACCCATGTTCACCAAGCCGATTTGCGGGCAGAAATGGCATGATCCAGGTTTTTaGTGCTGCAGTCTGGTTCAA +
Preference number: 4 (lower is better)
Translates to: NSSLVQPMFTKPICGQKWHDPGF*CCSLVQ
Trigger: TTGAACCAGACTGCAGCAGCAAAAACCTGGATCATG...CCATTTCTGCCCGCAAATCGGCTTGGTGAACATGGGTTGGACCAATGAAGAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680787.1
CDS-3UTR GCA 90 bp GGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTTCCTCCCCCCTTCCCTCCCATTaGATTCACAATGGATCACCT +
Preference number: 4 (lower is better)
Translates to: GQFQDKISPDMLSLSPSSPLPSH*IHNGSP
Trigger: AGGTGATCCATTGTGAATGCAATGGGAGGGAAGGGG...GGAGGAAGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TCTGACCTTTCACTTGTGATCTCTTATCCATCTTCGGCCAGAGGCCTCTTTTTGAGTACCAACTTAGCCTaGTGCTGCAAAGACGAAGGA +
Preference number: 4 (lower is better)
Translates to: SDLSLVISYPSSARGLFLSTNLA*CCKDEG
Trigger: TCCTTCGTCTTTGCAGCAGCAGGCTAAGTTGGTACT...CAAAAAGAGGCCTCTGGCCGAAGATGGATAAGAGATCACAAGTGAAAGGTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp GATGTTTCCTTAGAGCCTGGGTTGTTGTTCCAAGAATCTGTGGAGAGTACCAACTTCTCCTTGACATACTaGAAGGCCCTAGCCATGAAG +
Preference number: 4 (lower is better)
Translates to: DVSLEPGLLFQESVESTNFSLTY*KALAMK
Trigger: CTTCATGGCTAGGGCCTTCCAGTATGTCAAGGAGAA...GTTGGTACTCTCCACAGATTCTTGGAACAACAACCCAGGCTCTAAGGAAACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000681927.1
CDS-3UTR CCA 90 bp GGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTTCCTCCAACTGGAAGGACGAATaGCCTGCATCCATAGCAACG +
Preference number: 4 (lower is better)
Translates to: GQFQDKISPDMLSLSPSSNWKDE*PASIAT
Trigger: CGTTGCTATGGATGCAGGCCATTCGTCCTTCCAGTT...GGAGGAAGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CCA 90 bp TCTGACCTTTCACTTGTGATCTCTTATCCATCTTCGGCCAGAGGCCTCTTTTTGCCTCAGACTGCAAAGTaGTCACCAGCAATTCAGAGA +
Preference number: 4 (lower is better)
Translates to: SDLSLVISYPSSARGLFLPQTAK*SPAIQR
Trigger: TCTCTGAATTGCTGGTGACCACTTTGCAGTCTGAGG...CAAAAAGAGGCCTCTGGCCGAAGATGGATAAGAGATCACAAGTGAAAGGTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp TACACAGTCCCACATGCCCCTTCCCTCCCATTGCATTCACAATGGATCACCTTTCTGAATATGGTAGACTaGATTTTCCAGAGATGGCTG +
Preference number: 4 (lower is better)
Translates to: YTVPHAPSLPLHSQWITFLNMVD*IFQRWL
Trigger: CAGCCATCTCTGGAAAATCCAGTCTACCATATTCAG...AAAGGTGATCCATTGTGAATGCAATGGGAGGGAAGGGGCATGTGGGACTGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp TTACACAATAAGCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCGCGGAGCGTTTTGTaGTGCGTCCTTCCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: LHNKRLVSFKIKFPQTCCPRSVL*CVLPSL
Trigger: CAGACTGGGAAGGACGCACCACAAAACGCTCCGCGG...ACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGCTTATTGTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679661.1
CDS-3UTR TCA 90 bp GCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTGAACCACACTGTTTCTaGTTCTTCACTGGCGTCACG +
Preference number: 4 (lower is better)
Translates to: AFGQFQDKISPDMLSLSPEPHCF*FFTGVT
Trigger: CGTGACGCCAGTGAAGAATCAGAAACAGTGTGGTTC...AGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000259470.6
ENST00000679661.1
ENST00000680385.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR TCA 90 bp GCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTACCACCAGAACACCATaGTCCAGGTTTTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: AFGQFQDKISPDMLSLSPTTRTP*SRFLLL
Trigger: CAGCAGCAAAAACCTGGATCATGGTGTTCTGGTGGT...AGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR TCA 90 bp AGGGGACTCACAGCTTTCAGAGCTGAGAGCCCCGAACAGAGATTTACCCATGTTATCAGAGACTTGGAATaGAAACAAAATACCCTTGGT +
Preference number: 4 (lower is better)
Translates to: RGLTAFRAESPEQRFTHVIRDLE*KQNTLG
Trigger: ACCAAGGGTATTTTGTTTTCATTCCAAGTCTCTGAT...AACATGGGTAAATCTCTGTTCGGGGCTCTCAGCTCTGAAAGCTGTGAGTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp TTGGGATACACAGTCCCACATGCCCCTTCCCTCCCATTGCATTCACAATGGATCTTTACCCATGTTTATTaGCAGCAAGCCAGTGATAAA +
Preference number: 4 (lower is better)
Translates to: LGYTVPHAPSLPLHSQWIFTHVY*QQASDK
Trigger: TTTATCACTGGCTTGCTGTCAATAAACATGGGTAAA...GATCCATTGTGAATGCAATGGGAGGGAAGGGGCATGTGGGACTGTGTATCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp GCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTCAGTCCACCAGATTCTaGTCGCTCAGTGAGACAAGT +
Preference number: 4 (lower is better)
Translates to: AFGQFQDKISPDMLSLSPQSTRF*SLSETS
Trigger: ACTTGTCTCACTGAGCGAGCAGAATCTGGTGGACTG...AGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR GCA 90 bp GAGTCTGGCCTAGTGACTTCTGACCTTTCACTTGTGATCTCTTATCCATCTTCGCATGATCCAGGTTTTTaGTGCTGCAGTCTGGTTCAA +
Preference number: 4 (lower is better)
Translates to: ESGLVTSDLSLVISYPSSHDPGF*CCSLVQ
Trigger: TTGAACCAGACTGCAGCAGCAAAAACCTGGATCATG...CGAAGATGGATAAGAGATCACAAGTGAAAGGTCAGAAGTCACTAGGCCAGACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp ACTAAAAGTATTCCTTCCCAAACGAAACAAAGGCATGGGGTCTGGCTAGTTATCCTGAGATCACACTACTaGACTCCAGCCTTGGTGACA +
Preference number: 4 (lower is better)
Translates to: TKSIPSQTKQRHGVWLVILRSHY*TPALVT
Trigger: TGTCACCAAGGCTGGAGTGCAGTAGTGTGATCTCAG...GATAACTAGCCAGACCCCATGCCTTTGTTTCGTTTGGGAAGGAATACTTTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp GCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTCTGAGATCACACTACTaGACTCCAGCCTTGGTGACA +
Preference number: 4 (lower is better)
Translates to: AFGQFQDKISPDMLSLSPLRSHY*TPALVT
Trigger: TGTCACCAAGGCTGGAGTGCAGTAGTGTGATCTCAG...AGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp GAGTCTGGCCTAGTGACTTCTGACCTTTCACTTGTGATCTCTTATCCATCTTCGGGCTCTCCTTTAGCCTaGAGAATGTGGGTATATCTT +
Preference number: 4 (lower is better)
Translates to: ESGLVTSDLSLVISYPSSGSPLA*RMWVYL
Trigger: AAGATATACCCACATTCTGCAGGCTAAAGGAGAGCC...CGAAGATGGATAAGAGATCACAAGTGAAAGGTCAGAAGTCACTAGGCCAGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp GCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTCCCCTTCCCTCCCATTaGATTCACAATGGATCACCT +
Preference number: 4 (lower is better)
Translates to: AFGQFQDKISPDMLSLSPPLPSH*IHNGSP
Trigger: AGGTGATCCATTGTGAATGCAATGGGAGGGAAGGGG...AGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp AACAAAATACCCTTGGTAACTTACTTGCACCTGCGTCTTCCTCAGACTGCAAAGAGTACCAACTTAGCCTaGTGCTGCAAAGACGAAGGA +
Preference number: 4 (lower is better)
Translates to: NKIPLVTYLHLRLPQTAKSTNLA*CCKDEG
Trigger: TCCTTCGTCTTTGCAGCAGCAGGCTAAGTTGGTACT...CTTTGCAGTCTGAGGAAGACGCAGGTGCAAGTAAGTTACCAAGGGTATTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp TACACAGTCCCACATGCCCCTTCCCTCCCATTGCATTCACAATGGATCACCTTTATTTTGGTCAAATTTTaGAACAGCGGAGGCTATTCC +
Preference number: 4 (lower is better)
Translates to: YTVPHAPSLPLHSQWITFILVKF*NSGGYS
Trigger: GGAATAGCCTCCGCTGTTCCAAAATTTGACCAAAAT...AAAGGTGATCCATTGTGAATGCAATGGGAGGGAAGGGGCATGTGGGACTGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp AATTCTTCATTGGTCCAACCCATGTTCACCAAGCCGATTTGCGGGCAGAAATGGTGTGTTGCCTTCCACTaGTACCACTTTGTATCCAAA +
Preference number: 4 (lower is better)
Translates to: NSSLVQPMFTKPICGQKWCVAFH*YHFVSK
Trigger: TTTGGATACAAAGTGGTACCAGTGGAAGGCAACACA...CCATTTCTGCCCGCAAATCGGCTTGGTGAACATGGGTTGGACCAATGAAGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680787.1
CDS-3UTR CCA 90 bp GAGTCTGGCCTAGTGACTTCTGACCTTTCACTTGTGATCTCTTATCCATCTTCGCCCTTCCTGAATTTCTaGTTTCGAAAGCAACCCATC +
Preference number: 4 (lower is better)
Translates to: ESGLVTSDLSLVISYPSSPFLNF*FRKQPI
Trigger: GATGGGTTGCTTTCGAAACCAGAAATTCAGGAAGGG...CGAAGATGGATAAGAGATCACAAGTGAAAGGTCAGAAGTCACTAGGCCAGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259470.6
ENST00000680385.1
ENST00000681927.1
CDS-3UTR CCA 90 bp GGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTTCCTCCTTCTCCTTGACATACTaGAAGGCCCTAGCCATGAAG +
Preference number: 4 (lower is better)
Translates to: GQFQDKISPDMLSLSPSSFSLTY*KALAMK
Trigger: CTTCATGGCTAGGGCCTTCCAGTATGTCAAGGAGAA...GGAGGAAGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CCA 90 bp ACTAAAAGTATTCCTTCCCAAACGAAACAAAGGCATGGGGTCTGGCTAGTTATCAACTGGAAGGACGAATaGCCTGCATCCATAGCAACG +
Preference number: 4 (lower is better)
Translates to: TKSIPSQTKQRHGVWLVINWKDE*PASIAT
Trigger: CGTTGCTATGGATGCAGGCCATTCGTCCTTCCAGTT...GATAACTAGCCAGACCCCATGCCTTTGTTTCGTTTGGGAAGGAATACTTTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp CAGCTTGGTCATGGAGACCCTAACCCAGAGGCGCTAGAGAAATTAAAGACACACGTAACACACAGTAACTaGGCAGCTGATATAAAGTCT +
Preference number: 4 (lower is better)
Translates to: QLGHGDPNPEALEKLKTHVTHSN*AADIKS
Trigger: AGACTTTATATCAGCTGCCCAGTTACTGTGTGTTAC...GTGTGTCTTTAATTTCTCTAGCGCCTCTGGGTTAGGGTCTCCATGACCAAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp GCCCAGCCTCATCTCTTGTGGACCTTGAACAAATTTCTCCAGCTACTGTCAAATGGTAGATTCAGGAGTTaGGTAACACACAGTAACTGG +
Preference number: 4 (lower is better)
Translates to: AQPHLLWTLNKFLQLLSNGRFRS*VTHSNW
Trigger: CCAGTTACTGTGTGTTACCCAACTCCTGAATCTACC...ATTTGACAGTAGCTGGAGAAATTTGTTCAAGGTCCACAAGAGATGAGGCTGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp AACAAAATACCCTTGGTAACTTACTTGCACCTGCGTCTTCCTCAGACTGCAAAGCCTCAGACTGCAAAGTaGTCACCAGCAATTCAGAGA +
Preference number: 4 (lower is better)
Translates to: NKIPLVTYLHLRLPQTAKPQTAK*SPAIQR
Trigger: TCTCTGAATTGCTGGTGACCACTTTGCAGTCTGAGG...CTTTGCAGTCTGAGGAAGACGCAGGTGCAAGTAAGTTACCAAGGGTATTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp CAGCTTGGTCATGGAGACCCTAACCCAGAGGCGCTAGAGAAATTAAAGACACACTGCTGTGTGATGTTTTaGTCAGTGACTGCATATATG +
Preference number: 4 (lower is better)
Translates to: QLGHGDPNPEALEKLKTHCCVMF*SVTAYM
Trigger: CATATATGCAGTCACTGACCAAAACATCACACAGCA...GTGTGTCTTTAATTTCTCTAGCGCCTCTGGGTTAGGGTCTCCATGACCAAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp GGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTTCCTCCCTAGAAGCTACTCTCTaGCTATCAACTCCCAACAGC +
Preference number: 4 (lower is better)
Translates to: GQFQDKISPDMLSLSPSSLEATL*LSTPNS
Trigger: GCTGTTGGGAGTTGATAGCCAGAGAGTAGCTTCTAG...GGAGGAAGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680787.1
CDS-3UTR CCA 90 bp GGTTGTTCTTGTCTTTGGCTATTTTTACATAGCCATTCGAGCCCCATTCTGGACTTGCCTGGTAAGGTCTaGTGTCTAGAAGCTACTCTC +
Preference number: 4 (lower is better)
Translates to: GCSCLWLFLHSHSSPILDLPGKV*CLEATL
Trigger: GAGAGTAGCTTCTAGACACCAGACCTTACCAGGCAA...GTCCAGAATGGGGCTCGAATGGCTATGTAAAAATAGCCAAAGACAAGAACAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680787.1
CDS-3UTR CCA 90 bp ACTTGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCATCAAAACCTCGAGGCTaGCAGAGCTCCGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: TWILNDSTGLSYTISVWSSKPRG*QSSGQK
Trigger: CTTCTGCCCGGAGCTCTGCCAGCCTCGAGGTTTTGA...TGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680787.1
ENST00000681737.1
CDS-3UTR TCA 90 bp ACTTGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCACAGCAAACAAGCCTCTaGGATTACAGACGTCCGCGG +
Preference number: 4 (lower is better)
Translates to: TWILNDSTGLSYTISVWSQQTSL*DYRRPR
Trigger: CCGCGGACGTCTGTAATCTCAGAGGCTTGTTTGCTG...TGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259470.6
ENST00000680221.1
ENST00000680385.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR TCA 90 bp GCCCAGCCTCATCTCTTGTGGACCTTGAACAAATTTCTCCAGCTACTGTCAAATCTACTGTCAAATGCCTaGGATTTGTTAACCACACCA +
Preference number: 4 (lower is better)
Translates to: AQPHLLWTLNKFLQLLSNLLSNA*DLLTTP
Trigger: TGGTGTGGTTAACAAATCTCAGGCATTTGACAGTAG...ATTTGACAGTAGCTGGAGAAATTTGTTCAAGGTCCACAAGAGATGAGGCTGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp GATGTTTCCTTAGAGCCTGGGTTGTTGTTCCAAGAATCTGTGGAGAGTACCAACCTACTGTCAAATGCCTaGGATTTGTTAACCACACCA +
Preference number: 4 (lower is better)
Translates to: DVSLEPGLLFQESVESTNLLSNA*DLLTTP
Trigger: TGGTGTGGTTAACAAATCTCAGGCATTTGACAGTAG...GTTGGTACTCTCCACAGATTCTTGGAACAACAACCCAGGCTCTAAGGAAACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp GAGTCTGGCCTAGTGACTTCTGACCTTTCACTTGTGATCTCTTATCCATCTTCGCTACTGTCAAATGCCTaGGATTTGTTAACCACACCA +
Preference number: 4 (lower is better)
Translates to: ESGLVTSDLSLVISYPSSLLSNA*DLLTTP
Trigger: TGGTGTGGTTAACAAATCTCAGGCATTTGACAGTAG...CGAAGATGGATAAGAGATCACAAGTGAAAGGTCAGAAGTCACTAGGCCAGACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp TCTGACCTTTCACTTGTGATCTCTTATCCATCTTCGGCCAGAGGCCTCTTTTTGATCTCTTGTGGACCTTaGACAAATTTCTCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: SDLSLVISYPSSARGLFLISCGP*TNFSSY
Trigger: GTAGCTGGAGAAATTTGTTCAAGGTCCACAAGAGAT...CAAAAAGAGGCCTCTGGCCGAAGATGGATAAGAGATCACAAGTGAAAGGTCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp GCCCAGCCTCATCTCTTGTGGACCTTGAACAAATTTCTCCAGCTACTGTCAAATATCTCTTGTGGACCTTaGACAAATTTCTCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: AQPHLLWTLNKFLQLLSNISCGP*TNFSSY
Trigger: GTAGCTGGAGAAATTTGTTCAAGGTCCACAAGAGAT...ATTTGACAGTAGCTGGAGAAATTTGTTCAAGGTCCACAAGAGATGAGGCTGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp CCAGATTTGGGGGCATATCCCCAGCAAATATTGGTTAAGTCTGTGCTTCAGACTATCTCTTGTGGACCTTaGACAAATTTCTCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: PDLGAYPQQILVKSVLQTISCGP*TNFSSY
Trigger: GTAGCTGGAGAAATTTGTTCAAGGTCCACAAGAGAT...AGTCTGAAGCACAGACTTAACCAATATTTGCTGGGGATATGCCCCCAAATCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp CCAGATTTGGGGGCATATCCCCAGCAAATATTGGTTAAGTCTGTGCTTCAGACTGATCCAGGTTTTTGCTaGTGCAGTCTGGTTCAAAAT +
Preference number: 4 (lower is better)
Translates to: PDLGAYPQQILVKSVLQTDPGFC*CSLVQN
Trigger: ATTTTGAACCAGACTGCAGCAGCAAAAACCTGGATC...AGTCTGAAGCACAGACTTAACCAATATTTGCTGGGGATATGCCCCCAAATCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp GGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTTCCTCCCATGATCCAGGTTTTTaGTGCTGCAGTCTGGTTCAA +
Preference number: 4 (lower is better)
Translates to: GQFQDKISPDMLSLSPSSHDPGF*CCSLVQ
Trigger: TTGAACCAGACTGCAGCAGCAAAAACCTGGATCATG...GGAGGAAGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR GCA 90 bp AACAAAATACCCTTGGTAACTTACTTGCACCTGCGTCTTCCTCAGACTGCAAAGGCTGTTATTCGAATTTaGTCCTTCAAAGCCGTAGCC +
Preference number: 4 (lower is better)
Translates to: NKIPLVTYLHLRLPQTAKAVIRI*SFKAVA
Trigger: GGCTACGGCTTTGAAGGAGCAAATTCGAATAACAGC...CTTTGCAGTCTGAGGAAGACGCAGGTGCAAGTAAGTTACCAAGGGTATTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp GGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTTCCTCCGCTGTTATTCGAATTTaGTCCTTCAAAGCCGTAGCC +
Preference number: 4 (lower is better)
Translates to: GQFQDKISPDMLSLSPSSAVIRI*SFKAVA
Trigger: GGCTACGGCTTTGAAGGAGCAAATTCGAATAACAGC...GGAGGAAGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TTCTGGACCCCAGCTGTTTTTGACGAGCCAATACTTGCTGTTATTCGAATTTGCGCTGTTATTCGAATTTaGTCCTTCAAAGCCGTAGCC +
Preference number: 4 (lower is better)
Translates to: FWTPAVFDEPILAVIRICAVIRI*SFKAVA
Trigger: GGCTACGGCTTTGAAGGAGCAAATTCGAATAACAGC...GCAAATTCGAATAACAGCAAGTATTGGCTCGTCAAAAACAGCTGGGGTCCAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680385.1
ENST00000680787.1
CDS-3UTR GCA 90 bp GCCCAGCCTCATCTCTTGTGGACCTTGAACAAATTTCTCCAGCTACTGTCAAATCCAGCTACTGTCAAATaGCTGAGATTTGTTAACCAC +
Preference number: 4 (lower is better)
Translates to: AQPHLLWTLNKFLQLLSNPATVK*LRFVNH
Trigger: GTGGTTAACAAATCTCAGGCATTTGACAGTAGCTGG...ATTTGACAGTAGCTGGAGAAATTTGTTCAAGGTCCACAAGAGATGAGGCTGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp GGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTTCCTCCGGCTCTCCTTTAGCCTaGAGAATGTGGGTATATCTT +
Preference number: 4 (lower is better)
Translates to: GQFQDKISPDMLSLSPSSGSPLA*RMWVYL
Trigger: AAGATATACCCACATTCTGCAGGCTAAAGGAGAGCC...GGAGGAAGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TCCTTAGAGCCTGGGTTGTTGTTCCAAGAATCTGTGGAGAGTACCAACTTAGCCAACCTGTCACAGTACTaGAGAGATTTTGTTTATGGC +
Preference number: 4 (lower is better)
Translates to: SLEPGLLFQESVESTNLANLSQY*RDFVYG
Trigger: GCCATAAACAAAATCTCTGCAGTACTGTGACAGGTT...GGCTAAGTTGGTACTCTCCACAGATTCTTGGAACAACAACCCAGGCTCTAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp CAGCTTGGTCATGGAGACCCTAACCCAGAGGCGCTAGAGAAATTAAAGACACACTCCTCCCTCTTAATATaGTCAGTGATTTCTATCTCA +
Preference number: 4 (lower is better)
Translates to: QLGHGDPNPEALEKLKTHSSLLI*SVISIS
Trigger: TGAGATAGAAATCACTGAGCATATTAAGAGGGAGGA...GTGTGTCTTTAATTTCTCTAGCGCCTCTGGGTTAGGGTCTCCATGACCAAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp CCAGATTTGGGGGCATATCCCCAGCAAATATTGGTTAAGTCTGTGCTTCAGACTGTTTTGGTCAGTGACTaGATATATGATAGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: PDLGAYPQQILVKSVLQTVLVSD*IYDSGP
Trigger: GGGACCACTATCATATATGCAGTCACTGACCAAAAC...AGTCTGAAGCACAGACTTAACCAATATTTGCTGGGGATATGCCCCCAAATCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp ACTTGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCACGGAGCGTTTTGTGGTaGGTCCTTCCCAGTCTGTTG +
Preference number: 4 (lower is better)
Translates to: TWILNDSTGLSYTISVWSRSVLW*VLPSLL
Trigger: CAACAGACTGGGAAGGACGCACCACAAAACGCTCCG...TGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679661.1
CDS-3UTR CCA 90 bp TCCTTAGAGCCTGGGTTGTTGTTCCAAGAATCTGTGGAGAGTACCAACTTAGCCATTTTGGTCAAATTTTaGAACAGCGGAGGCTATTCC +
Preference number: 4 (lower is better)
Translates to: SLEPGLLFQESVESTNLAILVKF*NSGGYS
Trigger: GGAATAGCCTCCGCTGTTCCAAAATTTGACCAAAAT...GGCTAAGTTGGTACTCTCCACAGATTCTTGGAACAACAACCCAGGCTCTAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp GGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTTCCTCCCCCTTCCTGAATTTCTaGTTTCGAAAGCAACCCATC +
Preference number: 4 (lower is better)
Translates to: GQFQDKISPDMLSLSPSSPFLNF*FRKQPI
Trigger: GATGGGTTGCTTTCGAAACCAGAAATTCAGGAAGGG...GGAGGAAGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000259470.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CCA 90 bp GCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTTTCTCCTTGACATACTaGAAGGCCCTAGCCATGAAG +
Preference number: 4 (lower is better)
Translates to: AFGQFQDKISPDMLSLSPFSLTY*KALAMK
Trigger: CTTCATGGCTAGGGCCTTCCAGTATGTCAAGGAGAA...AGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CCA 90 bp TCCTTAGAGCCTGGGTTGTTGTTCCAAGAATCTGTGGAGAGTACCAACTTAGCCGTAACACACAGTAACTaGGCAGCTGATATAAAGTCT +
Preference number: 4 (lower is better)
Translates to: SLEPGLLFQESVESTNLAVTHSN*AADIKS
Trigger: AGACTTTATATCAGCTGCCCAGTTACTGTGTGTTAC...GGCTAAGTTGGTACTCTCCACAGATTCTTGGAACAACAACCCAGGCTCTAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp GCCCAGCCTCATCTCTTGTGGACCTTGAACAAATTTCTCCAGCTACTGTCAAATCAGCCTCATCTCTTGTaGACCTTGAACAAATTTCTC +
Preference number: 4 (lower is better)
Translates to: AQPHLLWTLNKFLQLLSNQPHLL*TLNKFL
Trigger: GAGAAATTTGTTCAAGGTCCACAAGAGATGAGGCTG...ATTTGACAGTAGCTGGAGAAATTTGTTCAAGGTCCACAAGAGATGAGGCTGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp GAGTCTGGCCTAGTGACTTCTGACCTTTCACTTGTGATCTCTTATCCATCTTCGCTGAATATGGTAGACTaGATTTTCCAGAGATGGCTG +
Preference number: 4 (lower is better)
Translates to: ESGLVTSDLSLVISYPSSLNMVD*IFQRWL
Trigger: CAGCCATCTCTGGAAAATCCAGTCTACCATATTCAG...CGAAGATGGATAAGAGATCACAAGTGAAAGGTCAGAAGTCACTAGGCCAGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp TCTGACCTTTCACTTGTGATCTCTTATCCATCTTCGGCCAGAGGCCTCTTTTTGCTGAATATGGTAGACTaGATTTTCCAGAGATGGCTG +
Preference number: 4 (lower is better)
Translates to: SDLSLVISYPSSARGLFLLNMVD*IFQRWL
Trigger: CAGCCATCTCTGGAAAATCCAGTCTACCATATTCAG...CAAAAAGAGGCCTCTGGCCGAAGATGGATAAGAGATCACAAGTGAAAGGTCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp GCCCAGCCTCATCTCTTGTGGACCTTGAACAAATTTCTCCAGCTACTGTCAAATCTGAATATGGTAGACTaGATTTTCCAGAGATGGCTG +
Preference number: 4 (lower is better)
Translates to: AQPHLLWTLNKFLQLLSNLNMVD*IFQRWL
Trigger: CAGCCATCTCTGGAAAATCCAGTCTACCATATTCAG...ATTTGACAGTAGCTGGAGAAATTTGTTCAAGGTCCACAAGAGATGAGGCTGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp GCCCAGCCTCATCTCTTGTGGACCTTGAACAAATTTCTCCAGCTACTGTCAAATTGTTTCCTTAGAGCCTaGGTTGTTGTTCCAAGAATC +
Preference number: 4 (lower is better)
Translates to: AQPHLLWTLNKFLQLLSNCFLRA*VVVPRI
Trigger: GATTCTTGGAACAACAACCCAGGCTCTAAGGAAACA...ATTTGACAGTAGCTGGAGAAATTTGTTCAAGGTCCACAAGAGATGAGGCTGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp TTACACAATAAGCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTAAAACACGGGATGGATaGTCGAGACCGGACACCAGG +
Preference number: 4 (lower is better)
Translates to: LHNKRLVSFKIKFPQTCCKTRDG*SRPDTR
Trigger: CCTGGTGTCCGGTCTCGACCATCCATCCCGTGTTTT...ACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGCTTATTGTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000679661.1
CDS-3UTR CCA 90 bp ATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTTCATCAAAACCTCGAGGCTaGCAGAGCTCCGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: ILNDSTGLSYTISVWSVSSKPRG*QSSGQK
Trigger: CTTCTGCCCGGAGCTCTGCCAGCCTCGAGGTTTTGA...TGAAACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680787.1
ENST00000681737.1
CDS-3UTR TCA 90 bp GCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTATTCTGCTCGCTCAGTaGGACAAGTTTCCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: AFGQFQDKISPDMLSLSPILLAQ*DKFPSF
Trigger: AAAACTGGGAAACTTGTCTCACTGAGCGAGCAGAAT...AGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR TCA 90 bp TGCAAAGACGAAGGAATCCTTTCTCAGAGAAAACTCAAGACTGAATATGGTAGAACCACCAGAACACCATaGTCCAGGTTTTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: CKDEGILSQRKLKTEYGRTTRTP*SRFLLL
Trigger: CAGCAGCAAAAACCTGGATCATGGTGTTCTGGTGGT...TCTACCATATTCAGTCTTGAGTTTTCTCTGAGAAAGGATTCCTTCGTCTTTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp AGTCTACTGGCTTGTTTGAAAAACGCTTTTAGACAACACATCAGGTTTGTAACTGCCTTGGTGACAGAGTaGGAGAGACTCCGTCTCATA +
Preference number: 4 (lower is better)
Translates to: SLLACLKNAFRQHIRFVTALVTE*ERLRLI
Trigger: TATGAGACGGAGTCTCTCTCACTCTGTCACCAAGGC...AGTTACAAACCTGATGTGTTGTCTAAAAGCGTTTTTCAAACAAGCCAGTAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp TCTCCAGCTACTGTCAAATGCCTGAGATTTGTTAACCACACCATTTATTTTTGCGCCTGGCCAAGATGGTaGAACCCTCTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: SPATVKCLRFVNHTIYFCAWPRW*NPLSTK
Trigger: TTTAGTAGAGAGAGGGTTTCACCATCTTGGCCAGGC...GCAAAAATAAATGGTGTGGTTAACAAATCTCAGGCATTTGACAGTAGCTGGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp TCCTTAGAGCCTGGGTTGTTGTTCCAAGAATCTGTGGAGAGTACCAACTTAGCCATCAGAGACTTGGAATaGAAACAAAATACCCTTGGT +
Preference number: 4 (lower is better)
Translates to: SLEPGLLFQESVESTNLAIRDLE*KQNTLG
Trigger: ACCAAGGGTATTTTGTTTTCATTCCAAGTCTCTGAT...GGCTAAGTTGGTACTCTCCACAGATTCTTGGAACAACAACCCAGGCTCTAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp GCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTCTGACCTTTCACTTGTaGTCTCTTATCCATCTTCGG +
Preference number: 4 (lower is better)
Translates to: AFGQFQDKISPDMLSLSPLTFHL*SLIHLR
Trigger: CCGAAGATGGATAAGAGATCACAAGTGAAAGGTCAG...AGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp TCTGACCTTTCACTTGTGATCTCTTATCCATCTTCGGCCAGAGGCCTCTTTTTGGTCTACTGGCTTGTTTaGAAAACGCTTTTAGACAAC +
Preference number: 4 (lower is better)
Translates to: SDLSLVISYPSSARGLFLVYWLV*KTLLDN
Trigger: GTTGTCTAAAAGCGTTTTTCAAACAAGCCAGTAGAC...CAAAAAGAGGCCTCTGGCCGAAGATGGATAAGAGATCACAAGTGAAAGGTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp TCCTTAGAGCCTGGGTTGTTGTTCCAAGAATCTGTGGAGAGTACCAACTTAGCCTTTACCCATGTTTATTaGCAGCAAGCCAGTGATAAA +
Preference number: 4 (lower is better)
Translates to: SLEPGLLFQESVESTNLAFTHVY*QQASDK
Trigger: TTTATCACTGGCTTGCTGTCAATAAACATGGGTAAA...GGCTAAGTTGGTACTCTCCACAGATTCTTGGAACAACAACCCAGGCTCTAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp ACTTGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCACATTGCAGCCCTGATTaGCTTGAGGACGCGAACAGT +
Preference number: 4 (lower is better)
Translates to: TWILNDSTGLSYTISVWSHCSPD*LEDANS
Trigger: ACTGTTCGCGTCCTCAAGGCAATCAGGGCTGCAATG...TGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TTACACAATAAGCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCATTGCAGCCCTGATTaGCTTGAGGACGCGAACAGT +
Preference number: 4 (lower is better)
Translates to: LHNKRLVSFKIKFPQTCCHCSPD*LEDANS
Trigger: ACTGTTCGCGTCCTCAAGGCAATCAGGGCTGCAATG...ACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGCTTATTGTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR GCA 90 bp AGTCTACTGGCTTGTTTGAAAAACGCTTTTAGACAACACATCAGGTTTGTAACTCTTCTCCTTTCCAGGTaGGACCACTGTGAAGCCAGT +
Preference number: 4 (lower is better)
Translates to: SLLACLKNAFRQHIRFVTLLLSR*DHCEAS
Trigger: ACTGGCTTCACAGTGGTCGCACCTGGAAAGGAGAAG...AGTTACAAACCTGATGTGTTGTCTAAAAGCGTTTTTCAAACAAGCCAGTAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTCTTCTCCTTTCCAGGTaGGACCACTGTGAAGCCAGT +
Preference number: 4 (lower is better)
Translates to: WILNDSTGLSYTISVWSVLLLSR*DHCEAS
Trigger: ACTGGCTTCACAGTGGTCGCACCTGGAAAGGAGAAG...AACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR GCA 90 bp GCCCAGCCTCATCTCTTGTGGACCTTGAACAAATTTCTCCAGCTACTGTCAAATCCAGGTTTTTGCTGCTaGAGTCTGGTTCAAAATAAA +
Preference number: 4 (lower is better)
Translates to: AQPHLLWTLNKFLQLLSNPGFCC*SLVQNK
Trigger: TTTATTTTGAACCAGACTGCAGCAGCAAAAACCTGG...ATTTGACAGTAGCTGGAGAAATTTGTTCAAGGTCCACAAGAGATGAGGCTGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp AACAAAATACCCTTGGTAACTTACTTGCACCTGCGTCTTCCTCAGACTGCAAAGGATCCAGGTTTTTGCTaGTGCAGTCTGGTTCAAAAT +
Preference number: 4 (lower is better)
Translates to: NKIPLVTYLHLRLPQTAKDPGFC*CSLVQN
Trigger: ATTTTGAACCAGACTGCAGCAGCAAAAACCTGGATC...CTTTGCAGTCTGAGGAAGACGCAGGTGCAAGTAAGTTACCAAGGGTATTTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TCTCCAGCTACTGTCAAATGCCTGAGATTTGTTAACCACACCATTTATTTTTGCGCGTCTTCCTCAGACTaGAAAGTGGTCACCAGCAAT +
Preference number: 4 (lower is better)
Translates to: SPATVKCLRFVNHTIYFCASSSD*KVVTSN
Trigger: ATTGCTGGTGACCACTTTGCAGTCTGAGGAAGACGC...GCAAAAATAAATGGTGTGGTTAACAAATCTCAGGCATTTGACAGTAGCTGGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp ACTAAAAGTATTCCTTCCCAAACGAAACAAAGGCATGGGGTCTGGCTAGTTATCAACTTAGCCTGCTGCTaGAAAGACGAAGGAATCCTT +
Preference number: 4 (lower is better)
Translates to: TKSIPSQTKQRHGVWLVINLACC*KDEGIL
Trigger: AAGGATTCCTTCGTCTTTGCAGCAGCAGGCTAAGTT...GATAACTAGCCAGACCCCATGCCTTTGTTTCGTTTGGGAAGGAATACTTTTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TCTGACCTTTCACTTGTGATCTCTTATCCATCTTCGGCCAGAGGCCTCTTTTTGAACCTGTCACAGTACTaGAGAGATTTTGTTTATGGC +
Preference number: 4 (lower is better)
Translates to: SDLSLVISYPSSARGLFLNLSQY*RDFVYG
Trigger: GCCATAAACAAAATCTCTGCAGTACTGTGACAGGTT...CAAAAAGAGGCCTCTGGCCGAAGATGGATAAGAGATCACAAGTGAAAGGTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp GAGTCTGGCCTAGTGACTTCTGACCTTTCACTTGTGATCTCTTATCCATCTTCGAACCTGTCACAGTACTaGAGAGATTTTGTTTATGGC +
Preference number: 4 (lower is better)
Translates to: ESGLVTSDLSLVISYPSSNLSQY*RDFVYG
Trigger: GCCATAAACAAAATCTCTGCAGTACTGTGACAGGTT...CGAAGATGGATAAGAGATCACAAGTGAAAGGTCAGAAGTCACTAGGCCAGACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp GCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTCCCTTCCTGAATTTCTaGTTTCGAAAGCAACCCATC +
Preference number: 4 (lower is better)
Translates to: AFGQFQDKISPDMLSLSPPFLNF*FRKQPI
Trigger: GATGGGTTGCTTTCGAAACCAGAAATTCAGGAAGGG...AGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000259470.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CCA 90 bp GGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTTCCTCCATCCACTGCTACATATaGATAGGATTCCTCAGAGTC +
Preference number: 4 (lower is better)
Translates to: GQFQDKISPDMLSLSPSSIHCYI*IGFLRV
Trigger: GACTCTGAGGAATCCTATCCATATGTAGCAGTGGAT...GGAGGAAGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CCA 90 bp GGTTGTTCTTGTCTTTGGCTATTTTTACATAGCCATTCGAGCCCCATTCTGGACATCCACTGCTACATATaGATAGGATTCCTCAGAGTC +
Preference number: 4 (lower is better)
Translates to: GCSCLWLFLHSHSSPILDIHCYI*IGFLRV
Trigger: GACTCTGAGGAATCCTATCCATATGTAGCAGTGGAT...GTCCAGAATGGGGCTCGAATGGCTATGTAAAAATAGCCAAAGACAAGAACAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680787.1
CDS-3UTR CCA 90 bp ACTAAAAGTATTCCTTCCCAAACGAAACAAAGGCATGGGGTCTGGCTAGTTATCGGTAGATTCAGGAGTTaGGTAACACACAGTAACTGG +
Preference number: 4 (lower is better)
Translates to: TKSIPSQTKQRHGVWLVIGRFRS*VTHSNW
Trigger: CCAGTTACTGTGTGTTACCCAACTCCTGAATCTACC...GATAACTAGCCAGACCCCATGCCTTTGTTTCGTTTGGGAAGGAATACTTTTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp GAGTCTGGCCTAGTGACTTCTGACCTTTCACTTGTGATCTCTTATCCATCTTCGCAGAGATTTTGTTTATaGCCAGATTTGGGGGCATAT +
Preference number: 4 (lower is better)
Translates to: ESGLVTSDLSLVISYPSSQRFCL*PDLGAY
Trigger: ATATGCCCCCAAATCTGGCCATAAACAAAATCTCTG...CGAAGATGGATAAGAGATCACAAGTGAAAGGTCAGAAGTCACTAGGCCAGACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp CCAGATTTGGGGGCATATCCCCAGCAAATATTGGTTAAGTCTGTGCTTCAGACTTGCTGTGTGATGTTTTaGTCAGTGACTGCATATATG +
Preference number: 4 (lower is better)
Translates to: PDLGAYPQQILVKSVLQTCCVMF*SVTAYM
Trigger: CATATATGCAGTCACTGACCAAAACATCACACAGCA...AGTCTGAAGCACAGACTTAACCAATATTTGCTGGGGATATGCCCCCAAATCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp GAGTCTGGCCTAGTGACTTCTGACCTTTCACTTGTGATCTCTTATCCATCTTCGTGCTGTGTGATGTTTTaGTCAGTGACTGCATATATG +
Preference number: 4 (lower is better)
Translates to: ESGLVTSDLSLVISYPSSCCVMF*SVTAYM
Trigger: CATATATGCAGTCACTGACCAAAACATCACACAGCA...CGAAGATGGATAAGAGATCACAAGTGAAAGGTCAGAAGTCACTAGGCCAGACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp GATCTCTCAGACTTAACAAAGAACCAGCAGAGGCAGATGTTTCTGCTTACTATTTCTCCAGAGTCCCTCTaGACAGTTTCAGATGTTACC +
Preference number: 4 (lower is better)
Translates to: DLSDLTKNQQRQMFLLTISPESL*TVSDVT
Trigger: GGTAACATCTGAAACTGTCCAGAGGGACTCTGGAGA...AATAGTAAGCAGAAACATCTGCCTCTGCTGGTTCTTTGTTAAGTCTGAGAGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681330.1
CDS-3UTR TCA 90 bp ACTTGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGAACCACACTGTTTCTaGTTCTTCACTGGCGTCACG +
Preference number: 4 (lower is better)
Translates to: TWILNDSTGLSYTISVWSEPHCF*FFTGVT
Trigger: CGTGACGCCAGTGAAGAATCAGAAACAGTGTGGTTC...TGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000259470.6
ENST00000679661.1
ENST00000680385.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR TCA 90 bp TGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTACCACCAGAACACCATaGTCCAGGTTTTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: WILNDSTGLSYTISVWSVTTRTP*SRFLLL
Trigger: CAGCAGCAAAAACCTGGATCATGGTGTTCTGGTGGT...AACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR TCA 90 bp TTACACAATAAGCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTACCACCAGAACACCATaGTCCAGGTTTTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LHNKRLVSFKIKFPQTCCTTRTP*SRFLLL
Trigger: CAGCAGCAAAAACCTGGATCATGGTGTTCTGGTGGT...ACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGCTTATTGTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR TCA 90 bp CTTCACTTTTTATCACGTAACCTAACCATCTTGAGGTTATGTGTCAAAGGAAGAACCACCAGAACACCATaGTCCAGGTTTTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LHFLSRNLTILRLCVKGRTTRTP*SRFLLL
Trigger: CAGCAGCAAAAACCTGGATCATGGTGTTCTGGTGGT...TCTTCCTTTGACACATAACCTCAAGATGGTTAGGTTACGTGATAAAAAGTGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp ACTTGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAACCACCAGAACACCATaGTCCAGGTTTTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TWILNDSTGLSYTISVWSTTRTP*SRFLLL
Trigger: CAGCAGCAAAAACCTGGATCATGGTGTTCTGGTGGT...TGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR TCA 90 bp TGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTGACCCCAGCTGTTTTTaGCGAGCCAATACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: WILNDSTGLSYTISVWSVDPSCF*RANTCC
Trigger: ACAGCAAGTATTGGCTCGTCAAAAACAGCTGGGGTC...AACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR TCA 90 bp ACTTGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGACCCCAGCTGTTTTTaGCGAGCCAATACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: TWILNDSTGLSYTISVWSDPSCF*RANTCC
Trigger: ACAGCAAGTATTGGCTCGTCAAAAACAGCTGGGGTC...TGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR TCA 90 bp CTGTGCTTCAGACTAGATTTTTCAAGTCTACTGGCTTGTTTGAAAAACGCTTTTGACCCCAGCTGTTTTTaGCGAGCCAATACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: LCFRLDFSSLLACLKNAFDPSCF*RANTCC
Trigger: ACAGCAAGTATTGGCTCGTCAAAAACAGCTGGGGTC...AAAAGCGTTTTTCAAACAAGCCAGTAGACTTGAAAAATCTAGTCTGAAGCACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp GAGTCTGGCCTAGTGACTTCTGACCTTTCACTTGTGATCTCTTATCCATCTTCGATCAGAGACTTGGAATaGAAACAAAATACCCTTGGT +
Preference number: 4 (lower is better)
Translates to: ESGLVTSDLSLVISYPSSIRDLE*KQNTLG
Trigger: ACCAAGGGTATTTTGTTTTCATTCCAAGTCTCTGAT...CGAAGATGGATAAGAGATCACAAGTGAAAGGTCAGAAGTCACTAGGCCAGACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp GCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTATCTCTTGTGGACCTTaGACAAATTTCTCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: AFGQFQDKISPDMLSLSPISCGP*TNFSSY
Trigger: GTAGCTGGAGAAATTTGTTCAAGGTCCACAAGAGAT...AGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp TGCAAAGACGAAGGAATCCTTTCTCAGAGAAAACTCAAGACTGAATATGGTAGAGGCAAAACATACACATaGACCACACATAGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: CKDEGILSQRKLKTEYGRGKTYT*TTHRAE
Trigger: CTCAGCCCTATGTGTGGTTCATGTGTATGTTTTGCC...TCTACCATATTCAGTCTTGAGTTTTCTCTGAGAAAGGATTCCTTCGTCTTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp ACAATTGAGATATCCATACACACAAGTCATGTGCTGTGTGATGTTTTGGTCAGTGGCAAAACATACACATaGACCACACATAGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: TIEISIHTSHVLCDVLVSGKTYT*TTHRAE
Trigger: CTCAGCCCTATGTGTGGTTCATGTGTATGTTTTGCC...ACTGACCAAAACATCACACAGCACATGACTTGTGTGTATGGATATCTCAATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTCAGTCCACCAGATTCTaGTCGCTCAGTGAGACAAGT +
Preference number: 4 (lower is better)
Translates to: WILNDSTGLSYTISVWSVQSTRF*SLSETS
Trigger: ACTTGTCTCACTGAGCGAGCAGAATCTGGTGGACTG...AACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TCTGACCTTTCACTTGTGATCTCTTATCCATCTTCGGCCAGAGGCCTCTTTTTGACAGATTTCATCCACTaGTACATATGGATAGGATTC +
Preference number: 4 (lower is better)
Translates to: SDLSLVISYPSSARGLFLTDFIH*YIWIGF
Trigger: GAATCCTATCCATATGTAGCAGTGGATGAAATCTGT...CAAAAAGAGGCCTCTGGCCGAAGATGGATAAGAGATCACAAGTGAAAGGTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000681927.1
CDS-3UTR GCA 90 bp CCAGATTTGGGGGCATATCCCCAGCAAATATTGGTTAAGTCTGTGCTTCAGACTACAGATTTCATCCACTaGTACATATGGATAGGATTC +
Preference number: 4 (lower is better)
Translates to: PDLGAYPQQILVKSVLQTTDFIH*YIWIGF
Trigger: GAATCCTATCCATATGTAGCAGTGGATGAAATCTGT...AGTCTGAAGCACAGACTTAACCAATATTTGCTGGGGATATGCCCCCAAATCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000681927.1
CDS-3UTR GCA 90 bp AGTCTACTGGCTTGTTTGAAAAACGCTTTTAGACAACACATCAGGTTTGTAACTGAAGGACGAATGGCCTaGATCCATAGCAACGGAGAT +
Preference number: 4 (lower is better)
Translates to: SLLACLKNAFRQHIRFVTEGRMA*IHSNGD
Trigger: ATCTCCGTTGCTATGGATGCAGGCCATTCGTCCTTC...AGTTACAAACCTGATGTGTTGTCTAAAAGCGTTTTTCAAACAAGCCAGTAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp ACTTGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGAAGGACGAATGGCCTaGATCCATAGCAACGGAGAT +
Preference number: 4 (lower is better)
Translates to: TWILNDSTGLSYTISVWSEGRMA*IHSNGD
Trigger: ATCTCCGTTGCTATGGATGCAGGCCATTCGTCCTTC...TGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TTACACAATAAGCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTGCGTCTTCCTCAGACTaGAAAGTGGTCACCAGCAAT +
Preference number: 4 (lower is better)
Translates to: LHNKRLVSFKIKFPQTCCASSSD*KVVTSN
Trigger: ATTGCTGGTGACCACTTTGCAGTCTGAGGAAGACGC...ACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGCTTATTGTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTGCGTCTTCCTCAGACTaGAAAGTGGTCACCAGCAAT +
Preference number: 4 (lower is better)
Translates to: WILNDSTGLSYTISVWSVASSSD*KVVTSN
Trigger: ATTGCTGGTGACCACTTTGCAGTCTGAGGAAGACGC...AACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp ATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTTCAATACACAGTCCCACATaGCCCTTCCCTCCCATTGCA +
Preference number: 4 (lower is better)
Translates to: ILNDSTGLSYTISVWSVSIHSPT*PFPPIA
Trigger: TGCAATGGGAGGGAAGGGGCATGTGGGACTGTGTAT...TGAAACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TGCAAAGACGAAGGAATCCTTTCTCAGAGAAAACTCAAGACTGAATATGGTAGAACCAACTTAGCCTGCTaGTGCAAAGACGAAGGAATC +
Preference number: 4 (lower is better)
Translates to: CKDEGILSQRKLKTEYGRTNLAC*CKDEGI
Trigger: GATTCCTTCGTCTTTGCAGCAGCAGGCTAAGTTGGT...TCTACCATATTCAGTCTTGAGTTTTCTCTGAGAAAGGATTCCTTCGTCTTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp ACAATTGAGATATCCATACACACAAGTCATGTGCTGTGTGATGTTTTGGTCAGTACCAACTTAGCCTGCTaGTGCAAAGACGAAGGAATC +
Preference number: 4 (lower is better)
Translates to: TIEISIHTSHVLCDVLVSTNLAC*CKDEGI
Trigger: GATTCCTTCGTCTTTGCAGCAGCAGGCTAAGTTGGT...ACTGACCAAAACATCACACAGCACATGACTTGTGTGTATGGATATCTCAATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp GCCCAGCCTCATCTCTTGTGGACCTTGAACAAATTTCTCCAGCTACTGTCAAATTCCTCCCTCTTAATATaGTCAGTGATTTCTATCTCA +
Preference number: 4 (lower is better)
Translates to: AQPHLLWTLNKFLQLLSNSSLLI*SVISIS
Trigger: TGAGATAGAAATCACTGAGCATATTAAGAGGGAGGA...ATTTGACAGTAGCTGGAGAAATTTGTTCAAGGTCCACAAGAGATGAGGCTGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp ACTAAAAGTATTCCTTCCCAAACGAAACAAAGGCATGGGGTCTGGCTAGTTATCGTTTTGGTCAGTGACTaGATATATGATAGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: TKSIPSQTKQRHGVWLVIVLVSD*IYDSGP
Trigger: GGGACCACTATCATATATGCAGTCACTGACCAAAAC...GATAACTAGCCAGACCCCATGCCTTTGTTTCGTTTGGGAAGGAATACTTTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp ACTAAAAGTATTCCTTCCCAAACGAAACAAAGGCATGGGGTCTGGCTAGTTATCTGTGTTGCCTTCCACTaGTACCACTTTGTATCCAAA +
Preference number: 4 (lower is better)
Translates to: TKSIPSQTKQRHGVWLVICVAFH*YHFVSK
Trigger: TTTGGATACAAAGTGGTACCAGTGGAAGGCAACACA...GATAACTAGCCAGACCCCATGCCTTTGTTTCGTTTGGGAAGGAATACTTTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp CTGTGCTTCAGACTAGATTTTTCAAGTCTACTGGCTTGTTTGAAAAACGCTTTTAACTGGAAGGACGAATaGCCTGCATCCATAGCAACG +
Preference number: 4 (lower is better)
Translates to: LCFRLDFSSLLACLKNAFNWKDE*PASIAT
Trigger: CGTTGCTATGGATGCAGGCCATTCGTCCTTCCAGTT...AAAAGCGTTTTTCAAACAAGCCAGTAGACTTGAAAAATCTAGTCTGAAGCACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp ACTTGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAAACTGGAAGGACGAATaGCCTGCATCCATAGCAACG +
Preference number: 4 (lower is better)
Translates to: TWILNDSTGLSYTISVWSNWKDE*PASIAT
Trigger: CGTTGCTATGGATGCAGGCCATTCGTCCTTCCAGTT...TGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CCA 90 bp TTACACAATAAGCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTAACTGGAAGGACGAATaGCCTGCATCCATAGCAACG +
Preference number: 4 (lower is better)
Translates to: LHNKRLVSFKIKFPQTCCNWKDE*PASIAT
Trigger: CGTTGCTATGGATGCAGGCCATTCGTCCTTCCAGTT...ACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGCTTATTGTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CCA 90 bp AACAAAATACCCTTGGTAACTTACTTGCACCTGCGTCTTCCTCAGACTGCAAAGGTAACACACAGTAACTaGGCAGCTGATATAAAGTCT +
Preference number: 4 (lower is better)
Translates to: NKIPLVTYLHLRLPQTAKVTHSN*AADIKS
Trigger: AGACTTTATATCAGCTGCCCAGTTACTGTGTGTTAC...CTTTGCAGTCTGAGGAAGACGCAGGTGCAAGTAAGTTACCAAGGGTATTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp GCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTCTATCAAAGGGTTTTTaGGATACACAGTCCCACATG +
Preference number: 4 (lower is better)
Translates to: AFGQFQDKISPDMLSLSPLSKGF*DTQSHM
Trigger: CATGTGGGACTGTGTATCCCAAAAACCCTTTGATAG...AGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp GGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTTCCTCCATCCCCAGCAAATATTaGTTAAGTCTGTGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: GQFQDKISPDMLSLSPSSIPSKY*LSLCFR
Trigger: TCTGAAGCACAGACTTAACCAATATTTGCTGGGGAT...GGAGGAAGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp AACAAAATACCCTTGGTAACTTACTTGCACCTGCGTCTTCCTCAGACTGCAAAGATCCCCAGCAAATATTaGTTAAGTCTGTGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: NKIPLVTYLHLRLPQTAKIPSKY*LSLCFR
Trigger: TCTGAAGCACAGACTTAACCAATATTTGCTGGGGAT...CTTTGCAGTCTGAGGAAGACGCAGGTGCAAGTAAGTTACCAAGGGTATTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp AACAAAATACCCTTGGTAACTTACTTGCACCTGCGTCTTCCTCAGACTGCAAAGTGCTGTGTGATGTTTTaGTCAGTGACTGCATATATG +
Preference number: 4 (lower is better)
Translates to: NKIPLVTYLHLRLPQTAKCCVMF*SVTAYM
Trigger: CATATATGCAGTCACTGACCAAAACATCACACAGCA...CTTTGCAGTCTGAGGAAGACGCAGGTGCAAGTAAGTTACCAAGGGTATTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp TGCAAAGACGAAGGAATCCTTTCTCAGAGAAAACTCAAGACTGAATATGGTAGAATTCTGCTCGCTCAGTaGGACAAGTTTCCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: CKDEGILSQRKLKTEYGRILLAQ*DKFPSF
Trigger: AAAACTGGGAAACTTGTCTCACTGAGCGAGCAGAAT...TCTACCATATTCAGTCTTGAGTTTTCTCTGAGAAAGGATTCCTTCGTCTTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000681927.1
CDS-3UTR TCA 90 bp ATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTTCAACCACCAGAACACCATaGTCCAGGTTTTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ILNDSTGLSYTISVWSVSTTRTP*SRFLLL
Trigger: CAGCAGCAAAAACCTGGATCATGGTGTTCTGGTGGT...TGAAACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR TCA 90 bp ATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTTCAGCCTGGCCAAGATGGTaGAACCCTCTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: ILNDSTGLSYTISVWSVSAWPRW*NPLSTK
Trigger: TTTAGTAGAGAGAGGGTTTCACCATCTTGGCCAGGC...TGAAACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp GGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTTCCTCCATCAGAGACTTGGAATaGAAACAAAATACCCTTGGT +
Preference number: 4 (lower is better)
Translates to: GQFQDKISPDMLSLSPSSIRDLE*KQNTLG
Trigger: ACCAAGGGTATTTTGTTTTCATTCCAAGTCTCTGAT...GGAGGAAGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp CTTCACTTTTTATCACGTAACCTAACCATCTTGAGGTTATGTGTCAAAGGAAGAGGCAAAACATACACATaGACCACACATAGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: LHFLSRNLTILRLCVKGRGKTYT*TTHRAE
Trigger: CTCAGCCCTATGTGTGGTTCATGTGTATGTTTTGCC...TCTTCCTTTGACACATAACCTCAAGATGGTTAGGTTACGTGATAAAAAGTGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp ATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTTCACAACAAGAACCACACTaGTTCTTCACTGGCGTCACG +
Preference number: 4 (lower is better)
Translates to: ILNDSTGLSYTISVWSVSQQEPH*FFTGVT
Trigger: CGTGACGCCAGTGAAGAATCAGTGTGGTTCTTGTTG...TGAAACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680221.1
CDS-3UTR GCA 90 bp GGTTGTTCTTGTCTTTGGCTATTTTTACATAGCCATTCGAGCCCCATTCTGGACACAGATTTCATCCACTaGTACATATGGATAGGATTC +
Preference number: 4 (lower is better)
Translates to: GCSCLWLFLHSHSSPILDTDFIH*YIWIGF
Trigger: GAATCCTATCCATATGTAGCAGTGGATGAAATCTGT...GTCCAGAATGGGGCTCGAATGGCTATGTAAAAATAGCCAAAGACAAGAACAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680787.1
CDS-3UTR GCA 90 bp ATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTTCAGAAGGACGAATGGCCTaGATCCATAGCAACGGAGAT +
Preference number: 4 (lower is better)
Translates to: ILNDSTGLSYTISVWSVSEGRMA*IHSNGD
Trigger: ATCTCCGTTGCTATGGATGCAGGCCATTCGTCCTTC...TGAAACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR GCA 90 bp GCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTCCAGGTTTTTGCTGCTaGAGTCTGGTTCAAAATAAA +
Preference number: 4 (lower is better)
Translates to: AFGQFQDKISPDMLSLSPPGFCC*SLVQNK
Trigger: TTTATTTTGAACCAGACTGCAGCAGCAAAAACCTGG...AGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TCTCCAGCTACTGTCAAATGCCTGAGATTTGTTAACCACACCATTTATTTTTGCGCTGTTATTCGAATTTaGTCCTTCAAAGCCGTAGCC +
Preference number: 4 (lower is better)
Translates to: SPATVKCLRFVNHTIYFCAVIRI*SFKAVA
Trigger: GGCTACGGCTTTGAAGGAGCAAATTCGAATAACAGC...GCAAAAATAAATGGTGTGGTTAACAAATCTCAGGCATTTGACAGTAGCTGGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp ACAATTGAGATATCCATACACACAAGTCATGTGCTGTGTGATGTTTTGGTCAGTGCTGTTATTCGAATTTaGTCCTTCAAAGCCGTAGCC +
Preference number: 4 (lower is better)
Translates to: TIEISIHTSHVLCDVLVSAVIRI*SFKAVA
Trigger: GGCTACGGCTTTGAAGGAGCAAATTCGAATAACAGC...ACTGACCAAAACATCACACAGCACATGACTTGTGTGTATGGATATCTCAATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TCTCCAGCTACTGTCAAATGCCTGAGATTTGTTAACCACACCATTTATTTTTGCGGCTCTCCTTTAGCCTaGAGAATGTGGGTATATCTT +
Preference number: 4 (lower is better)
Translates to: SPATVKCLRFVNHTIYFCGSPLA*RMWVYL
Trigger: AAGATATACCCACATTCTGCAGGCTAAAGGAGAGCC...GCAAAAATAAATGGTGTGGTTAACAAATCTCAGGCATTTGACAGTAGCTGGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TCTCCAGCTACTGTCAAATGCCTGAGATTTGTTAACCACACCATTTATTTTTGCAACTTAGCCTGCTGCTaGAAAGACGAAGGAATCCTT +
Preference number: 4 (lower is better)
Translates to: SPATVKCLRFVNHTIYFCNLACC*KDEGIL
Trigger: AAGGATTCCTTCGTCTTTGCAGCAGCAGGCTAAGTT...GCAAAAATAAATGGTGTGGTTAACAAATCTCAGGCATTTGACAGTAGCTGGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp ACTAAAAGTATTCCTTCCCAAACGAAACAAAGGCATGGGGTCTGGCTAGTTATCAACCTGTCACAGTACTaGAGAGATTTTGTTTATGGC +
Preference number: 4 (lower is better)
Translates to: TKSIPSQTKQRHGVWLVINLSQY*RDFVYG
Trigger: GCCATAAACAAAATCTCTGCAGTACTGTGACAGGTT...GATAACTAGCCAGACCCCATGCCTTTGTTTCGTTTGGGAAGGAATACTTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp ACTTGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTGCTGTTAGGTTATTaGCTGGTAAGGTCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: TWILNDSTGLSYTISVWSVLLGY*LVRSGV
Trigger: GACACCAGACCTTACCAGGCAATAACCTAACAGCAC...TGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680787.1
CDS-3UTR GCA 90 bp TTACACAATAAGCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTTTCACCAAGCCGATTTaGGGGCAGAAATGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: LHNKRLVSFKIKFPQTCCFTKPI*GQKWKR
Trigger: TCTCTTCCATTTCTGCCCGCAAATCGGCTTGGTGAA...ACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGCTTATTGTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680787.1
CDS-3UTR CCA 90 bp GATCTCTCAGACTTAACAAAGAACCAGCAGAGGCAGATGTTTCTGCTTACTATTTGTGTTGCCTTCCACTaGTACCACTTTGTATCCAAA +
Preference number: 4 (lower is better)
Translates to: DLSDLTKNQQRQMFLLTICVAFH*YHFVSK
Trigger: TTTGGATACAAAGTGGTACCAGTGGAAGGCAACACA...AATAGTAAGCAGAAACATCTGCCTCTGCTGGTTCTTTGTTAAGTCTGAGAGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681330.1
CDS-3UTR CCA 90 bp ACTTGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCATTCTCCTTGACATACTaGAAGGCCCTAGCCATGAAG +
Preference number: 4 (lower is better)
Translates to: TWILNDSTGLSYTISVWSFSLTY*KALAMK
Trigger: CTTCATGGCTAGGGCCTTCCAGTATGTCAAGGAGAA...TGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CCA 90 bp CTTCACTTTTTATCACGTAACCTAACCATCTTGAGGTTATGTGTCAAAGGAAGACCTCAGACTGCAAAGTaGTCACCAGCAATTCAGAGA +
Preference number: 4 (lower is better)
Translates to: LHFLSRNLTILRLCVKGRPQTAK*SPAIQR
Trigger: TCTCTGAATTGCTGGTGACCACTTTGCAGTCTGAGG...TCTTCCTTTGACACATAACCTCAAGATGGTTAGGTTACGTGATAAAAAGTGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp AACAAAATACCCTTGGTAACTTACTTGCACCTGCGTCTTCCTCAGACTGCAAAGATTCACCCACAAGTTTaGTGTACTTTCTTCCAGTAT +
Preference number: 4 (lower is better)
Translates to: NKIPLVTYLHLRLPQTAKIHPQV*CTFFQY
Trigger: ATACTGGAAGAAAGTACACCAAACTTGTGGGTGAAT...CTTTGCAGTCTGAGGAAGACGCAGGTGCAAGTAAGTTACCAAGGGTATTTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp GCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTATCCCCAGCAAATATTaGTTAAGTCTGTGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: AFGQFQDKISPDMLSLSPIPSKY*LSLCFR
Trigger: TCTGAAGCACAGACTTAACCAATATTTGCTGGGGAT...AGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp CTGTGCTTCAGACTAGATTTTTCAAGTCTACTGGCTTGTTTGAAAAACGCTTTTATTCTGCTCGCTCAGTaGGACAAGTTTCCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: LCFRLDFSSLLACLKNAFILLAQ*DKFPSF
Trigger: AAAACTGGGAAACTTGTCTCACTGAGCGAGCAGAAT...AAAAGCGTTTTTCAAACAAGCCAGTAGACTTGAAAAATCTAGTCTGAAGCACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000681927.1
CDS-3UTR TCA 90 bp TTACACAATAAGCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTATTCTGCTCGCTCAGTaGGACAAGTTTCCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: LHNKRLVSFKIKFPQTCCILLAQ*DKFPSF
Trigger: AAAACTGGGAAACTTGTCTCACTGAGCGAGCAGAAT...ACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGCTTATTGTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR TCA 90 bp TGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTATTCTGCTCGCTCAGTaGGACAAGTTTCCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: WILNDSTGLSYTISVWSVILLAQ*DKFPSF
Trigger: AAAACTGGGAAACTTGTCTCACTGAGCGAGCAGAAT...AACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR TCA 90 bp CTTCACTTTTTATCACGTAACCTAACCATCTTGAGGTTATGTGTCAAAGGAAGAATTCTGCTCGCTCAGTaGGACAAGTTTCCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: LHFLSRNLTILRLCVKGRILLAQ*DKFPSF
Trigger: AAAACTGGGAAACTTGTCTCACTGAGCGAGCAGAAT...TCTTCCTTTGACACATAACCTCAAGATGGTTAGGTTACGTGATAAAAAGTGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000681927.1
CDS-3UTR TCA 90 bp TTACACAATAAGCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCTGACCTTTCACTTGTaGTCTCTTATCCATCTTCGG +
Preference number: 4 (lower is better)
Translates to: LHNKRLVSFKIKFPQTCCLTFHL*SLIHLR
Trigger: CCGAAGATGGATAAGAGATCACAAGTGAAAGGTCAG...ACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGCTTATTGTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp ACTTGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCACTGACCTTTCACTTGTaGTCTCTTATCCATCTTCGG +
Preference number: 4 (lower is better)
Translates to: TWILNDSTGLSYTISVWSLTFHL*SLIHLR
Trigger: CCGAAGATGGATAAGAGATCACAAGTGAAAGGTCAG...TGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp GCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTACAGATTTCATCCACTaGTACATATGGATAGGATTC +
Preference number: 4 (lower is better)
Translates to: AFGQFQDKISPDMLSLSPTDFIH*YIWIGF
Trigger: GAATCCTATCCATATGTAGCAGTGGATGAAATCTGT...AGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR GCA 90 bp GGTTGTTCTTGTCTTTGGCTATTTTTACATAGCCATTCGAGCCCCATTCTGGACCTGGTTCAAAATAAATaGCTGATTTGTAGAACTGGA +
Preference number: 4 (lower is better)
Translates to: GCSCLWLFLHSHSSPILDLVQNK*LICRTG
Trigger: TCCAGTTCTACAAATCAGGCATTTATTTTGAACCAG...GTCCAGAATGGGGCTCGAATGGCTATGTAAAAATAGCCAAAGACAAGAACAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000680385.1
ENST00000680787.1
CDS-3UTR GCA 90 bp TGCAAAGACGAAGGAATCCTTTCTCAGAGAAAACTCAAGACTGAATATGGTAGAGATCCAGGTTTTTGCTaGTGCAGTCTGGTTCAAAAT +
Preference number: 4 (lower is better)
Translates to: CKDEGILSQRKLKTEYGRDPGFC*CSLVQN
Trigger: ATTTTGAACCAGACTGCAGCAGCAAAAACCTGGATC...TCTACCATATTCAGTCTTGAGTTTTCTCTGAGAAAGGATTCCTTCGTCTTTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTCATGATCCAGGTTTTTaGTGCTGCAGTCTGGTTCAA +
Preference number: 4 (lower is better)
Translates to: WILNDSTGLSYTISVWSVHDPGF*CCSLVQ
Trigger: TTGAACCAGACTGCAGCAGCAAAAACCTGGATCATG...AACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TTACACAATAAGCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTGCTGTTATTCGAATTTaGTCCTTCAAAGCCGTAGCC +
Preference number: 4 (lower is better)
Translates to: LHNKRLVSFKIKFPQTCCAVIRI*SFKAVA
Trigger: GGCTACGGCTTTGAAGGAGCAAATTCGAATAACAGC...ACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGCTTATTGTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR GCA 90 bp AGTCTACTGGCTTGTTTGAAAAACGCTTTTAGACAACACATCAGGTTTGTAACTGCTGTTATTCGAATTTaGTCCTTCAAAGCCGTAGCC +
Preference number: 4 (lower is better)
Translates to: SLLACLKNAFRQHIRFVTAVIRI*SFKAVA
Trigger: GGCTACGGCTTTGAAGGAGCAAATTCGAATAACAGC...AGTTACAAACCTGATGTGTTGTCTAAAAGCGTTTTTCAAACAAGCCAGTAGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp ACAATTGAGATATCCATACACACAAGTCATGTGCTGTGTGATGTTTTGGTCAGTCCAGCTACTGTCAAATaGCTGAGATTTGTTAACCAC +
Preference number: 4 (lower is better)
Translates to: TIEISIHTSHVLCDVLVSPATVK*LRFVNH
Trigger: GTGGTTAACAAATCTCAGGCATTTGACAGTAGCTGG...ACTGACCAAAACATCACACAGCACATGACTTGTGTGTATGGATATCTCAATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TGCAAAGACGAAGGAATCCTTTCTCAGAGAAAACTCAAGACTGAATATGGTAGACCAGCTACTGTCAAATaGCTGAGATTTGTTAACCAC +
Preference number: 4 (lower is better)
Translates to: CKDEGILSQRKLKTEYGRPATVK*LRFVNH
Trigger: GTGGTTAACAAATCTCAGGCATTTGACAGTAGCTGG...TCTACCATATTCAGTCTTGAGTTTTCTCTGAGAAAGGATTCCTTCGTCTTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp ACTTGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAAACTTAGCCTGCTGCTaGAAAGACGAAGGAATCCTT +
Preference number: 4 (lower is better)
Translates to: TWILNDSTGLSYTISVWSNLACC*KDEGIL
Trigger: AAGGATTCCTTCGTCTTTGCAGCAGCAGGCTAAGTT...TGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TTCTGGACCCCAGCTGTTTTTGACGAGCCAATACTTGCTGTTATTCGAATTTGCCACAATGGAGATATATaGCCATATTGCACCTATAAT +
Preference number: 4 (lower is better)
Translates to: FWTPAVFDEPILAVIRICHNGDI*PYCTYN
Trigger: ATTATAGGTGCAATATGGGCATATATCTCCATTGTG...GCAAATTCGAATAACAGCAAGTATTGGCTCGTCAAAAACAGCTGGGGTCCAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680787.1
CDS-3UTR CCA 90 bp TCTCCAGCTACTGTCAAATGCCTGAGATTTGTTAACCACACCATTTATTTTTGCTGTGTTGCCTTCCACTaGTACCACTTTGTATCCAAA +
Preference number: 4 (lower is better)
Translates to: SPATVKCLRFVNHTIYFCCVAFH*YHFVSK
Trigger: TTTGGATACAAAGTGGTACCAGTGGAAGGCAACACA...GCAAAAATAAATGGTGTGGTTAACAAATCTCAGGCATTTGACAGTAGCTGGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp TGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTCCCTTCCTGAATTTCTaGTTTCGAAAGCAACCCATC +
Preference number: 4 (lower is better)
Translates to: WILNDSTGLSYTISVWSVPFLNF*FRKQPI
Trigger: GATGGGTTGCTTTCGAAACCAGAAATTCAGGAAGGG...AACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000259470.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CCA 90 bp TGCAAAGACGAAGGAATCCTTTCTCAGAGAAAACTCAAGACTGAATATGGTAGAATCCACTGCTACATATaGATAGGATTCCTCAGAGTC +
Preference number: 4 (lower is better)
Translates to: CKDEGILSQRKLKTEYGRIHCYI*IGFLRV
Trigger: GACTCTGAGGAATCCTATCCATATGTAGCAGTGGAT...TCTACCATATTCAGTCTTGAGTTTTCTCTGAGAAAGGATTCCTTCGTCTTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000681927.1
CDS-3UTR CCA 90 bp CTGTGCTTCAGACTAGATTTTTCAAGTCTACTGGCTTGTTTGAAAAACGCTTTTGGTAGATTCAGGAGTTaGGTAACACACAGTAACTGG +
Preference number: 4 (lower is better)
Translates to: LCFRLDFSSLLACLKNAFGRFRS*VTHSNW
Trigger: CCAGTTACTGTGTGTTACCCAACTCCTGAATCTACC...AAAAGCGTTTTTCAAACAAGCCAGTAGACTTGAAAAATCTAGTCTGAAGCACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp ACTTGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGGTAGATTCAGGAGTTaGGTAACACACAGTAACTGG +
Preference number: 4 (lower is better)
Translates to: TWILNDSTGLSYTISVWSGRFRS*VTHSNW
Trigger: CCAGTTACTGTGTGTTACCCAACTCCTGAATCTACC...TGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp ATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTTCACCTCAGACTGCAAAGTaGTCACCAGCAATTCAGAGA +
Preference number: 4 (lower is better)
Translates to: ILNDSTGLSYTISVWSVSPQTAK*SPAIQR
Trigger: TCTCTGAATTGCTGGTGACCACTTTGCAGTCTGAGG...TGAAACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp TCTCCAGCTACTGTCAAATGCCTGAGATTTGTTAACCACACCATTTATTTTTGCCAGCCTCATCTCTTGTaGACCTTGAACAAATTTCTC +
Preference number: 4 (lower is better)
Translates to: SPATVKCLRFVNHTIYFCQPHLL*TLNKFL
Trigger: GAGAAATTTGTTCAAGGTCCACAAGAGATGAGGCTG...GCAAAAATAAATGGTGTGGTTAACAAATCTCAGGCATTTGACAGTAGCTGGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp TCTCCAGCTACTGTCAAATGCCTGAGATTTGTTAACCACACCATTTATTTTTGCTGTTTCCTTAGAGCCTaGGTTGTTGTTCCAAGAATC +
Preference number: 4 (lower is better)
Translates to: SPATVKCLRFVNHTIYFCCFLRA*VVVPRI
Trigger: GATTCTTGGAACAACAACCCAGGCTCTAAGGAAACA...GCAAAAATAAATGGTGTGGTTAACAAATCTCAGGCATTTGACAGTAGCTGGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp ATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTTCATCTCCAGAGTCCCTCTaGACAGTTTCAGATGTTACC +
Preference number: 4 (lower is better)
Translates to: ILNDSTGLSYTISVWSVSSPESL*TVSDVT
Trigger: GGTAACATCTGAAACTGTCCAGAGGGACTCTGGAGA...TGAAACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680787.1
CDS-3UTR TCA 90 bp ATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTTCAATTCTGCTCGCTCAGTaGGACAAGTTTCCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: ILNDSTGLSYTISVWSVSILLAQ*DKFPSF
Trigger: AAAACTGGGAAACTTGTCTCACTGAGCGAGCAGAAT...TGAAACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR TCA 90 bp TCTCCAGCTACTGTCAAATGCCTGAGATTTGTTAACCACACCATTTATTTTTGCGTCTACTGGCTTGTTTaGAAAACGCTTTTAGACAAC +
Preference number: 4 (lower is better)
Translates to: SPATVKCLRFVNHTIYFCVYWLV*KTLLDN
Trigger: GTTGTCTAAAAGCGTTTTTCAAACAAGCCAGTAGAC...GCAAAAATAAATGGTGTGGTTAACAAATCTCAGGCATTTGACAGTAGCTGGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp ACAATTGAGATATCCATACACACAAGTCATGTGCTGTGTGATGTTTTGGTCAGTGTCTACTGGCTTGTTTaGAAAACGCTTTTAGACAAC +
Preference number: 4 (lower is better)
Translates to: TIEISIHTSHVLCDVLVSVYWLV*KTLLDN
Trigger: GTTGTCTAAAAGCGTTTTTCAAACAAGCCAGTAGAC...ACTGACCAAAACATCACACAGCACATGACTTGTGTGTATGGATATCTCAATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp TTACACAATAAGCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTGCTTTATTGATTGATTaGGATGGAGTCTGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: LHNKRLVSFKIKFPQTCCALLID*DGVWLC
Trigger: ACAGAGCCAGACTCCATCTCAATCAATCAATAAAGC...ACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGCTTATTGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679661.1
CDS-3UTR GCA 90 bp GCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTCTGGTTCAAAATAAATaGCTGATTTGTAGAACTGGA +
Preference number: 4 (lower is better)
Translates to: AFGQFQDKISPDMLSLSPLVQNK*LICRTG
Trigger: TCCAGTTCTACAAATCAGGCATTTATTTTGAACCAG...AGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TTACACAATAAGCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTGATCCAGGTTTTTGCTaGTGCAGTCTGGTTCAAAAT +
Preference number: 4 (lower is better)
Translates to: LHNKRLVSFKIKFPQTCCDPGFC*CSLVQN
Trigger: ATTTTGAACCAGACTGCAGCAGCAAAAACCTGGATC...ACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGCTTATTGTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTGATCCAGGTTTTTGCTaGTGCAGTCTGGTTCAAAAT +
Preference number: 4 (lower is better)
Translates to: WILNDSTGLSYTISVWSVDPGFC*CSLVQN
Trigger: ATTTTGAACCAGACTGCAGCAGCAAAAACCTGGATC...AACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR GCA 90 bp ATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTTCAGCTGTTATTCGAATTTaGTCCTTCAAAGCCGTAGCC +
Preference number: 4 (lower is better)
Translates to: ILNDSTGLSYTISVWSVSAVIRI*SFKAVA
Trigger: GGCTACGGCTTTGAAGGAGCAAATTCGAATAACAGC...TGAAACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTCCAGCTACTGTCAAATaGCTGAGATTTGTTAACCAC +
Preference number: 4 (lower is better)
Translates to: WILNDSTGLSYTISVWSVPATVK*LRFVNH
Trigger: GTGGTTAACAAATCTCAGGCATTTGACAGTAGCTGG...AACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TGCAAAGACGAAGGAATCCTTTCTCAGAGAAAACTCAAGACTGAATATGGTAGAAACCTGTCACAGTACTaGAGAGATTTTGTTTATGGC +
Preference number: 4 (lower is better)
Translates to: CKDEGILSQRKLKTEYGRNLSQY*RDFVYG
Trigger: GCCATAAACAAAATCTCTGCAGTACTGTGACAGGTT...TCTACCATATTCAGTCTTGAGTTTTCTCTGAGAAAGGATTCCTTCGTCTTTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp ACTTGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTTTGGTCAGTGACTaGATATATGATAGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: TWILNDSTGLSYTISVWSVLVSD*IYDSGP
Trigger: GGGACCACTATCATATATGCAGTCACTGACCAAAAC...TGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp AGTCTACTGGCTTGTTTGAAAAACGCTTTTAGACAACACATCAGGTTTGTAACTGTTTTGGTCAGTGACTaGATATATGATAGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: SLLACLKNAFRQHIRFVTVLVSD*IYDSGP
Trigger: GGGACCACTATCATATATGCAGTCACTGACCAAAAC...AGTTACAAACCTGATGTGTTGTCTAAAAGCGTTTTTCAAACAAGCCAGTAGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTTCCTTCCCAGTCTGTTaGATTCAGGAATTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: WILNDSTGLSYTISVWSVSFPVC*IQEFFL
Trigger: AAGGAAGAATTCCTGAATGCAACAGACTGGGAAGGA...AACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679661.1
CDS-3UTR GCA 90 bp GATCTCTCAGACTTAACAAAGAACCAGCAGAGGCAGATGTTTCTGCTTACTATTAGAGGCAGATGTTTCTaGTTACTATTCCTTGTTGAA +
Preference number: 4 (lower is better)
Translates to: DLSDLTKNQQRQMFLLTIRGRCF*LLFLVE
Trigger: TTCAACAAGGAATAGTAAGCAGAAACATCTGCCTCT...AATAGTAAGCAGAAACATCTGCCTCTGCTGGTTCTTTGTTAAGTCTGAGAGATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681330.1
CDS-3UTR CCA 90 bp TTACACAATAAGCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTTGTGTTGCCTTCCACTaGTACCACTTTGTATCCAAA +
Preference number: 4 (lower is better)
Translates to: LHNKRLVSFKIKFPQTCCCVAFH*YHFVSK
Trigger: TTTGGATACAAAGTGGTACCAGTGGAAGGCAACACA...ACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGCTTATTGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CCA 90 bp TGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTTGTGTTGCCTTCCACTaGTACCACTTTGTATCCAAA +
Preference number: 4 (lower is better)
Translates to: WILNDSTGLSYTISVWSVCVAFH*YHFVSK
Trigger: TTTGGATACAAAGTGGTACCAGTGGAAGGCAACACA...AACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CCA 90 bp CTTCACTTTTTATCACGTAACCTAACCATCTTGAGGTTATGTGTCAAAGGAAGATGTGTTGCCTTCCACTaGTACCACTTTGTATCCAAA +
Preference number: 4 (lower is better)
Translates to: LHFLSRNLTILRLCVKGRCVAFH*YHFVSK
Trigger: TTTGGATACAAAGTGGTACCAGTGGAAGGCAACACA...TCTTCCTTTGACACATAACCTCAAGATGGTTAGGTTACGTGATAAAAAGTGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp ATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTTCACCCTTCCTGAATTTCTaGTTTCGAAAGCAACCCATC +
Preference number: 4 (lower is better)
Translates to: ILNDSTGLSYTISVWSVSPFLNF*FRKQPI
Trigger: GATGGGTTGCTTTCGAAACCAGAAATTCAGGAAGGG...TGAAACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000259470.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CCA 90 bp ACTTGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAATCCACTGCTACATATaGATAGGATTCCTCAGAGTC +
Preference number: 4 (lower is better)
Translates to: TWILNDSTGLSYTISVWSIHCYI*IGFLRV
Trigger: GACTCTGAGGAATCCTATCCATATGTAGCAGTGGAT...TGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CCA 90 bp TGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTATCCACTGCTACATATaGATAGGATTCCTCAGAGTC +
Preference number: 4 (lower is better)
Translates to: WILNDSTGLSYTISVWSVIHCYI*IGFLRV
Trigger: GACTCTGAGGAATCCTATCCATATGTAGCAGTGGAT...AACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CCA 90 bp CTGTGCTTCAGACTAGATTTTTCAAGTCTACTGGCTTGTTTGAAAAACGCTTTTCAGCCTCATCTCTTGTaGACCTTGAACAAATTTCTC +
Preference number: 4 (lower is better)
Translates to: LCFRLDFSSLLACLKNAFQPHLL*TLNKFL
Trigger: GAGAAATTTGTTCAAGGTCCACAAGAGATGAGGCTG...AAAAGCGTTTTTCAAACAAGCCAGTAGACTTGAAAAATCTAGTCTGAAGCACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp AGTCTACTGGCTTGTTTGAAAAACGCTTTTAGACAACACATCAGGTTTGTAACTCAGCCTCATCTCTTGTaGACCTTGAACAAATTTCTC +
Preference number: 4 (lower is better)
Translates to: SLLACLKNAFRQHIRFVTQPHLL*TLNKFL
Trigger: GAGAAATTTGTTCAAGGTCCACAAGAGATGAGGCTG...AGTTACAAACCTGATGTGTTGTCTAAAAGCGTTTTTCAAACAAGCCAGTAGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp TTACACAATAAGCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCTATCAAAGGGTTTTTaGGATACACAGTCCCACATG +
Preference number: 4 (lower is better)
Translates to: LHNKRLVSFKIKFPQTCCLSKGF*DTQSHM
Trigger: CATGTGGGACTGTGTATCCCAAAAACCCTTTGATAG...ACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGCTTATTGTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp TGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTCTATCAAAGGGTTTTTaGGATACACAGTCCCACATG +
Preference number: 4 (lower is better)
Translates to: WILNDSTGLSYTISVWSVLSKGF*DTQSHM
Trigger: CATGTGGGACTGTGTATCCCAAAAACCCTTTGATAG...AACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp ACTTGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCACTATCAAAGGGTTTTTaGGATACACAGTCCCACATG +
Preference number: 4 (lower is better)
Translates to: TWILNDSTGLSYTISVWSLSKGF*DTQSHM
Trigger: CATGTGGGACTGTGTATCCCAAAAACCCTTTGATAG...TGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp CTGTGCTTCAGACTAGATTTTTCAAGTCTACTGGCTTGTTTGAAAAACGCTTTTTGTTTCCTTAGAGCCTaGGTTGTTGTTCCAAGAATC +
Preference number: 4 (lower is better)
Translates to: LCFRLDFSSLLACLKNAFCFLRA*VVVPRI
Trigger: GATTCTTGGAACAACAACCCAGGCTCTAAGGAAACA...AAAAGCGTTTTTCAAACAAGCCAGTAGACTTGAAAAATCTAGTCTGAAGCACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp TGCAAAGACGAAGGAATCCTTTCTCAGAGAAAACTCAAGACTGAATATGGTAGAATCCCCAGCAAATATTaGTTAAGTCTGTGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: CKDEGILSQRKLKTEYGRIPSKY*LSLCFR
Trigger: TCTGAAGCACAGACTTAACCAATATTTGCTGGGGAT...TCTACCATATTCAGTCTTGAGTTTTCTCTGAGAAAGGATTCCTTCGTCTTTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp CTTCACTTTTTATCACGTAACCTAACCATCTTGAGGTTATGTGTCAAAGGAAGATACCACTGCTACATATaGATAGGATTCCTCAGAGTC +
Preference number: 4 (lower is better)
Translates to: LHFLSRNLTILRLCVKGRYHCYI*IGFLRV
Trigger: GACTCTGAGGAATCCTATCCATATGTAGCAGTGGTA...TCTTCCTTTGACACATAACCTCAAGATGGTTAGGTTACGTGATAAAAAGTGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680385.1
CDS-3UTR TCA 90 bp ACTTGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTCTACTGGCTTGTTTaGAAAACGCTTTTAGACAAC +
Preference number: 4 (lower is better)
Translates to: TWILNDSTGLSYTISVWSVYWLV*KTLLDN
Trigger: GTTGTCTAAAAGCGTTTTTCAAACAAGCCAGTAGAC...TGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TCTCCAGCTACTGTCAAATGCCTGAGATTTGTTAACCACACCATTTATTTTTGCACAGATTTCATCCACTaGTACATATGGATAGGATTC +
Preference number: 4 (lower is better)
Translates to: SPATVKCLRFVNHTIYFCTDFIH*YIWIGF
Trigger: GAATCCTATCCATATGTAGCAGTGGATGAAATCTGT...GCAAAAATAAATGGTGTGGTTAACAAATCTCAGGCATTTGACAGTAGCTGGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000681927.1
CDS-3UTR GCA 90 bp TTACACAATAAGCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCAGGTTTTTGCTGCTaGAGTCTGGTTCAAAATAAA +
Preference number: 4 (lower is better)
Translates to: LHNKRLVSFKIKFPQTCCPGFCC*SLVQNK
Trigger: TTTATTTTGAACCAGACTGCAGCAGCAAAAACCTGG...ACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGCTTATTGTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR GCA 90 bp ACTTGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCACCAGGTTTTTGCTGCTaGAGTCTGGTTCAAAATAAA +
Preference number: 4 (lower is better)
Translates to: TWILNDSTGLSYTISVWSPGFCC*SLVQNK
Trigger: TTTATTTTGAACCAGACTGCAGCAGCAAAAACCTGG...TGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR GCA 90 bp ATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTTCAGATCCAGGTTTTTGCTaGTGCAGTCTGGTTCAAAAT +
Preference number: 4 (lower is better)
Translates to: ILNDSTGLSYTISVWSVSDPGFC*CSLVQN
Trigger: ATTTTGAACCAGACTGCAGCAGCAAAAACCTGGATC...TGAAACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TCTCCAGCTACTGTCAAATGCCTGAGATTTGTTAACCACACCATTTATTTTTGCTCCTCCCTCTTAATATaGTCAGTGATTTCTATCTCA +
Preference number: 4 (lower is better)
Translates to: SPATVKCLRFVNHTIYFCSSLLI*SVISIS
Trigger: TGAGATAGAAATCACTGAGCATATTAAGAGGGAGGA...GCAAAAATAAATGGTGTGGTTAACAAATCTCAGGCATTTGACAGTAGCTGGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TTACACAATAAGCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTGATATATGCCCATATTaGACCTATAATGGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: LHNKRLVSFKIKFPQTCCDICPY*TYNGCC
Trigger: ACAGCACCCATTATAGGTGCAATATGGGCATATATC...ACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGCTTATTGTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680787.1
CDS-3UTR CCA 90 bp CTGTGCTTCAGACTAGATTTTTCAAGTCTACTGGCTTGTTTGAAAAACGCTTTTATTTTGGTCAAATTTTaGAACAGCGGAGGCTATTCC +
Preference number: 4 (lower is better)
Translates to: LCFRLDFSSLLACLKNAFILVKF*NSGGYS
Trigger: GGAATAGCCTCCGCTGTTCCAAAATTTGACCAAAAT...AAAAGCGTTTTTCAAACAAGCCAGTAGACTTGAAAAATCTAGTCTGAAGCACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp TGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTATTTTGGTCAAATTTTaGAACAGCGGAGGCTATTCC +
Preference number: 4 (lower is better)
Translates to: WILNDSTGLSYTISVWSVILVKF*NSGGYS
Trigger: GGAATAGCCTCCGCTGTTCCAAAATTTGACCAAAAT...AACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CCA 90 bp CTGTGCTTCAGACTAGATTTTTCAAGTCTACTGGCTTGTTTGAAAAACGCTTTTGTAACACACAGTAACTaGGCAGCTGATATAAAGTCT +
Preference number: 4 (lower is better)
Translates to: LCFRLDFSSLLACLKNAFVTHSN*AADIKS
Trigger: AGACTTTATATCAGCTGCCCAGTTACTGTGTGTTAC...AAAAGCGTTTTTCAAACAAGCCAGTAGACTTGAAAAATCTAGTCTGAAGCACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp ATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTTCATGTTTCCTTAGAGCCTaGGTTGTTGTTCCAAGAATC +
Preference number: 4 (lower is better)
Translates to: ILNDSTGLSYTISVWSVSCFLRA*VVVPRI
Trigger: GATTCTTGGAACAACAACCCAGGCTCTAAGGAAACA...TGAAACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp ACTTGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCACAGAGATTTTGTTTATaGCCAGATTTGGGGGCATAT +
Preference number: 4 (lower is better)
Translates to: TWILNDSTGLSYTISVWSQRFCL*PDLGAY
Trigger: ATATGCCCCCAAATCTGGCCATAAACAAAATCTCTG...TGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp ACTTGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCATTTACCCATGTTTATTaGCAGCAAGCCAGTGATAAA +
Preference number: 4 (lower is better)
Translates to: TWILNDSTGLSYTISVWSFTHVY*QQASDK
Trigger: TTTATCACTGGCTTGCTGTCAATAAACATGGGTAAA...TGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCAAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp CTTCACTTTTTATCACGTAACCTAACCATCTTGAGGTTATGTGTCAAAGGAAGATTTACCCATGTTTATTaGCAGCAAGCCAGTGATAAA +
Preference number: 4 (lower is better)
Translates to: LHFLSRNLTILRLCVKGRFTHVY*QQASDK
Trigger: TTTATCACTGGCTTGCTGTCAATAAACATGGGTAAA...TCTTCCTTTGACACATAACCTCAAGATGGTTAGGTTACGTGATAAAAAGTGAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp ACTTGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAACAGATTTCATCCACTaGTACATATGGATAGGATTC +
Preference number: 4 (lower is better)
Translates to: TWILNDSTGLSYTISVWSTDFIH*YIWIGF
Trigger: GAATCCTATCCATATGTAGCAGTGGATGAAATCTGT...TGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCAAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TCTCCAGCTACTGTCAAATGCCTGAGATTTGTTAACCACACCATTTATTTTTGCCTGGTTCAAAATAAATaGCTGATTTGTAGAACTGGA +
Preference number: 4 (lower is better)
Translates to: SPATVKCLRFVNHTIYFCLVQNK*LICRTG
Trigger: TCCAGTTCTACAAATCAGGCATTTATTTTGAACCAG...GCAAAAATAAATGGTGTGGTTAACAAATCTCAGGCATTTGACAGTAGCTGGAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp ATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTTCACCAGGTTTTTGCTGCTaGAGTCTGGTTCAAAATAAA +
Preference number: 4 (lower is better)
Translates to: ILNDSTGLSYTISVWSVSPGFCC*SLVQNK
Trigger: TTTATTTTGAACCAGACTGCAGCAGCAAAAACCTGG...TGAAACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR GCA 90 bp TGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTTCCTCCCTCTTAATATaGTCAGTGATTTCTATCTCA +
Preference number: 4 (lower is better)
Translates to: WILNDSTGLSYTISVWSVSSLLI*SVISIS
Trigger: TGAGATAGAAATCACTGAGCATATTAAGAGGGAGGA...AACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp ATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTTCAATTTTGGTCAAATTTTaGAACAGCGGAGGCTATTCC +
Preference number: 4 (lower is better)
Translates to: ILNDSTGLSYTISVWSVSILVKF*NSGGYS
Trigger: GGAATAGCCTCCGCTGTTCCAAAATTTGACCAAAAT...TGAAACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CCA 90 bp CTGTGCTTCAGACTAGATTTTTCAAGTCTACTGGCTTGTTTGAAAAACGCTTTTATTCACCCACAAGTTTaGTGTACTTTCTTCCAGTAT +
Preference number: 4 (lower is better)
Translates to: LCFRLDFSSLLACLKNAFIHPQV*CTFFQY
Trigger: ATACTGGAAGAAAGTACACCAAACTTGTGGGTGAAT...AAAAGCGTTTTTCAAACAAGCCAGTAGACTTGAAAAATCTAGTCTGAAGCACAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CCA 90 bp ATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTTCAATCCCCAGCAAATATTaGTTAAGTCTGTGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: ILNDSTGLSYTISVWSVSIPSKY*LSLCFR
Trigger: TCTGAAGCACAGACTTAACCAATATTTGCTGGGGAT...TGAAACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR TCA 90 bp ATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTTCAAATTGCTTTATTGATTaGTTGAGATGGAGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: ILNDSTGLSYTISVWSVSNCFID*LRWSLA
Trigger: AGCCAGACTCCATCTCAATCAATCAATAAAGCAATT...TGAAACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679661.1
CDS-3UTR GCA 90 bp ATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTTCAACAGATTTCATCCACTaGTACATATGGATAGGATTC +
Preference number: 4 (lower is better)
Translates to: ILNDSTGLSYTISVWSVSTDFIH*YIWIGF
Trigger: GAATCCTATCCATATGTAGCAGTGGATGAAATCTGT...TGAAACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR GCA 90 bp ACTTGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCACTGGTTCAAAATAAATaGCTGATTTGTAGAACTGGA +
Preference number: 4 (lower is better)
Translates to: TWILNDSTGLSYTISVWSLVQNK*LICRTG
Trigger: TCCAGTTCTACAAATCAGGCATTTATTTTGAACCAG...TGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCAAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CCA 90 bp ATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTTCAATTCACCCACAAGTTTaGTGTACTTTCTTCCAGTAT +
Preference number: 4 (lower is better)
Translates to: ILNDSTGLSYTISVWSVSIHPQV*CTFFQY
Trigger: ATACTGGAAGAAAGTACACCAAACTTGTGGGTGAAT...TGAAACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR GCA 90 bp ATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTTCACTGGTTCAAAATAAATaGCTGATTTGTAGAACTGGA +
Preference number: 4 (lower is better)
Translates to: ILNDSTGLSYTISVWSVSLVQNK*LICRTG
Trigger: TCCAGTTCTACAAATCAGGCATTTATTTTGAACCAG...TGAAACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS TCA 90 bp CAGCAGCCGTCGCAGCTGCGCAGGCACCCTCAGCAAACAAGCCTCTaGGATTACAGACGTCCGCGGTCTGGTGCAGGTTCGCCCGCCTCG +
Preference number: 5 (lower is better)
Translates to: QQPSQLRRHPQQTSL*DYRRPRSGAGSPAS
Trigger: CGAGGCGGGCGAACCTGCACCAGACCGCGGACGTCTGTAATCTCAGAGGCTTGTTTGCTGAGGGTGCCTGCGCAGCTGCGACGGCTGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680159.1
CDS GCA 90 bp TGTCCCTCGGTCTGGTCGGGGGCGCTCACCAGCAGCCGTCGCAGCTaGGCAGGCACCCTCAGCAAACAAGCCTCTGAGATTACAGACGTC +
Preference number: 5 (lower is better)
Translates to: CPSVWSGALTSSRRS*AGTLSKQASEITDV
Trigger: GACGTCTGTAATCTCAGAGGCTTGTTTGCTGAGGGTGCCTGCGCAGCTGCGACGGCTGCTGGTGAGCGCCCCCGACCAGACCGAGGGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000680787.1
ENST00000681737.1
CDS-3UTR CAA 90 bp CAGCTTGGTCATGGAGACCCTAACCCAGAGGCGCTAGAGAAATTAAAGACACACGCAGCCCTGATTGCCTaGAGGACGCGAACAGTCCAC +
Preference number: 5 (lower is better)
Translates to: QLGHGDPNPEALEKLKTHAALIA*RTRTVH
Trigger: GTGGACTGTTCGCGTCCTCAAGGCAATCAGGGCTGC...GTGTGTCTTTAATTTCTCTAGCGCCTCTGGGTTAGGGTCTCCATGACCAAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000681927.1
CDS-3UTR CAA 90 bp TACACAGTCCCACATGCCCCTTCCCTCCCATTGCATTCACAATGGATCACCTTTGCAGCCCTGATTGCCTaGAGGACGCGAACAGTCCAC +
Preference number: 5 (lower is better)
Translates to: YTVPHAPSLPLHSQWITFAALIA*RTRTVH
Trigger: GTGGACTGTTCGCGTCCTCAAGGCAATCAGGGCTGC...AAAGGTGATCCATTGTGAATGCAATGGGAGGGAAGGGGCATGTGGGACTGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000681927.1
CDS-3UTR CAA 90 bp GCCGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCTCTCATTCCGGTAAACATAATCTTCTGTGTGTaGCCTTCCACTGGTACCACT +
Preference number: 5 (lower is better)
Translates to: AVFPPWVVQVFLALIPVNIIFCV*PSTGTT
Trigger: AGTGGTACCAGTGGAAGGCAACACACAGAAGATTAT...GTTTACCGGAATGAGAGCAAGGAACACCTGGACCACCCAGGGCGGGAAAACGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp CGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCTCTCATTCCGGTAAACCTGCCCAGCCTCATCTCTaGTGGACCTTGAACAAATTT +
Preference number: 5 (lower is better)
Translates to: RFPALGGPGVPCSHSGKPAQPHL*WTLNKF
Trigger: AAATTTGTTCAAGGTCCACAAGAGATGAGGCTGGGC...AGGTTTACCGGAATGAGAGCAAGGAACACCTGGACCACCCAGGGCGGGAAAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp CGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCTCTCATTCCGGTAAACCTATAATCTTCTGTGTGTaGCCTTCCACTGGTACCACT +
Preference number: 5 (lower is better)
Translates to: RFPALGGPGVPCSHSGKPIIFCV*PSTGTT
Trigger: AGTGGTACCAGTGGAAGGCAACACACAGAAGATTAT...AGGTTTACCGGAATGAGAGCAAGGAACACCTGGACCACCCAGGGCGGGAAAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp GCCCAGCCTCATCTCTTGTGGACCTTGAACAAATTTCTCCAGCTACTGTCAAATGCAGCCCTGATTGCCTaGAGGACGCGAACAGTCCAC +
Preference number: 5 (lower is better)
Translates to: AQPHLLWTLNKFLQLLSNAALIA*RTRTVH
Trigger: GTGGACTGTTCGCGTCCTCAAGGCAATCAGGGCTGC...ATTTGACAGTAGCTGGAGAAATTTGTTCAAGGTCCACAAGAGATGAGGCTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000681927.1
CDS-3UTR CAA 90 bp CGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCTCTCATTCCGGTAAACCTTGCTGTTATTCGAATTaGCTCCTTCAAAGCCGTAGC +
Preference number: 5 (lower is better)
Translates to: RFPALGGPGVPCSHSGKPCCYSN*LLQSRS
Trigger: GCTACGGCTTTGAAGGAGCAAATTCGAATAACAGCA...AGGTTTACCGGAATGAGAGCAAGGAACACCTGGACCACCCAGGGCGGGAAAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp TTGGGATACACAGTCCCACATGCCCCTTCCCTCCCATTGCATTCACAATGGATCGGACCCCAGCTGTTTTaGACGAGCCAATACTTGCTG +
Preference number: 5 (lower is better)
Translates to: LGYTVPHAPSLPLHSQWIGPQLF*TSQYLL
Trigger: CAGCAAGTATTGGCTCGTCAAAAACAGCTGGGGTCC...GATCCATTGTGAATGCAATGGGAGGGAAGGGGCATGTGGGACTGTGTATCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp TTAGGAACGCCTTTAAGCCGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCGCTATCAAAGGGTTTTaGGGATACACAGTCCCACAT +
Preference number: 5 (lower is better)
Translates to: LGTPLSRFPALGGPGVPCAIKGF*GYTVPH
Trigger: ATGTGGGACTGTGTATCCCAAAAACCCTTTGATAGC...GCAAGGAACACCTGGACCACCCAGGGCGGGAAAACGGCTTAAAGGCGTTCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp GCCGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCTCTCATTCCGGTAAACTATCCCCAGCAAATATaGGTTAAGTCTGTGCTTCAG +
Preference number: 5 (lower is better)
Translates to: AVFPPWVVQVFLALIPVNYPQQI*VKSVLQ
Trigger: CTGAAGCACAGACTTAACCAATATTTGCTGGGGATA...GTTTACCGGAATGAGAGCAAGGAACACCTGGACCACCCAGGGCGGGAAAACGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS CCA 90 bp CTCTGCACCTCTTCCCCCGTACCTTGGCCTGCGCGTCTCTTCAACTaGATCCTTTATAATAACCTGGGTGAGTCTCATCTGAAGAATGAG +
Preference number: 5 (lower is better)
Translates to: LCTSSPVPWPARLFN*ILYNNLGESHLKNE
Trigger: CTCATTCTTCAGATGAGACTCACCCAGGTTATTATAAAGGATCCAGTTGAAGAGACGCGCAGGCCAAGGTACGGGGGAAGAGGTGCAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679551.1
CDS CCA 90 bp TTCCTTCTCCCATGTCTGGGTGAGTCTCATCTGAAGAATGAGTCATaGTGGTCACTGCAGGAAGGACTCTGCAGATCCAGAGTGAAGCTG +
Preference number: 5 (lower is better)
Translates to: FLLPCLGESHLKNES*WSLQEGLCRSRVKL
Trigger: CAGCTTCACTCTGGATCTGCAGAGTCCTTCCTGCAGTGACCACCATGACTCATTCTTCAGATGAGACTCACCCAGACATGGGAGAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681517.1
CDS-3UTR CAA 90 bp GCCGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCTCTCATTCCGGTAAACTCCACTGGTACCACTTaGTATCCAAATTTTGGTCAA +
Preference number: 5 (lower is better)
Translates to: AVFPPWVVQVFLALIPVNSTGTT*YPNFGQ
Trigger: TTGACCAAAATTTGGATACAAAGTGGTACCAGTGGA...GTTTACCGGAATGAGAGCAAGGAACACCTGGACCACCCAGGGCGGGAAAACGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp CCTGCGTCTTCCTCAGACTGCAAAGTGGTCACCAGCAATTCAGAGAGGCTCCAGATAATCTTCTGTGTGTaGCCTTCCACTGGTACCACT +
Preference number: 5 (lower is better)
Translates to: PASSSDCKVVTSNSERLQIIFCV*PSTGTT
Trigger: AGTGGTACCAGTGGAAGGCAACACACAGAAGATTAT...CTGGAGCCTCTCTGAATTGCTGGTGACCACTTTGCAGTCTGAGGAAGACGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp GGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTTCCTCCGCAGCCCTGATTGCCTaGAGGACGCGAACAGTCCAC +
Preference number: 5 (lower is better)
Translates to: GQFQDKISPDMLSLSPSSAALIA*RTRTVH
Trigger: GTGGACTGTTCGCGTCCTCAAGGCAATCAGGGCTGC...GGAGGAAGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CAA 90 bp GGTTGTTCTTGTCTTTGGCTATTTTTACATAGCCATTCGAGCCCCATTCTGGACGCAGCCCTGATTGCCTaGAGGACGCGAACAGTCCAC +
Preference number: 5 (lower is better)
Translates to: GCSCLWLFLHSHSSPILDAALIA*RTRTVH
Trigger: GTGGACTGTTCGCGTCCTCAAGGCAATCAGGGCTGC...GTCCAGAATGGGGCTCGAATGGCTATGTAAAAATAGCCAAAGACAAGAACAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680385.1
ENST00000680787.1
CDS-3UTR CAA 90 bp CAGCTTGGTCATGGAGACCCTAACCCAGAGGCGCTAGAGAAATTAAAGACACACGGACCCCAGCTGTTTTaGACGAGCCAATACTTGCTG +
Preference number: 5 (lower is better)
Translates to: QLGHGDPNPEALEKLKTHGPQLF*TSQYLL
Trigger: CAGCAAGTATTGGCTCGTCAAAAACAGCTGGGGTCC...GTGTGTCTTTAATTTCTCTAGCGCCTCTGGGTTAGGGTCTCCATGACCAAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp CAGCTTGGTCATGGAGACCCTAACCCAGAGGCGCTAGAGAAATTAAAGACACACCCCTTGGTAACTTACTaGCACCTGCGTCTTCCTCAG +
Preference number: 5 (lower is better)
Translates to: QLGHGDPNPEALEKLKTHPLVTY*HLRLPQ
Trigger: CTGAGGAAGACGCAGGTGCAAGTAAGTTACCAAGGG...GTGTGTCTTTAATTTCTCTAGCGCCTCTGGGTTAGGGTCTCCATGACCAAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp TTAGGAACGCCTTTAAGCCGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCCATCTCTTGTGGACCTaGAACAAATTTCTCCAGCTA +
Preference number: 5 (lower is better)
Translates to: LGTPLSRFPALGGPGVPCHLLWT*NKFLQL
Trigger: TAGCTGGAGAAATTTGTTCAAGGTCCACAAGAGATG...GCAAGGAACACCTGGACCACCCAGGGCGGGAAAACGGCTTAAAGGCGTTCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp GGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTTCCTCCAGACCGCGGAGCGTTTaGTGGTGCGTCCTTCCCAGT +
Preference number: 5 (lower is better)
Translates to: GQFQDKISPDMLSLSPSSRPRSV*WCVLPS
Trigger: ACTGGGAAGGACGCACCACAAAACGCTCCGCGGTCT...GGAGGAAGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679661.1
CDS-3UTR CAA 90 bp GCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTGCAGCCCTGATTGCCTaGAGGACGCGAACAGTCCAC +
Preference number: 5 (lower is better)
Translates to: AFGQFQDKISPDMLSLSPAALIA*RTRTVH
Trigger: GTGGACTGTTCGCGTCCTCAAGGCAATCAGGGCTGC...AGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CAA 90 bp CGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCTCTCATTCCGGTAAACCTCCACAGTGGTTGTTCTaGTCTTTGGCTATTTTTACA +
Preference number: 5 (lower is better)
Translates to: RFPALGGPGVPCSHSGKPPQWLF*SLAIFT
Trigger: TGTAAAAATAGCCAAAGACAAGAACAACCACTGTGG...AGGTTTACCGGAATGAGAGCAAGGAACACCTGGACCACCCAGGGCGGGAAAACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp TTAGGAACGCCTTTAAGCCGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCCCACAGTGGTTGTTCTaGTCTTTGGCTATTTTTACA +
Preference number: 5 (lower is better)
Translates to: LGTPLSRFPALGGPGVPCPQWLF*SLAIFT
Trigger: TGTAAAAATAGCCAAAGACAAGAACAACCACTGTGG...GCAAGGAACACCTGGACCACCCAGGGCGGGAAAACGGCTTAAAGGCGTTCCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp TTGGGATACACAGTCCCACATGCCCCTTCCCTCCCATTGCATTCACAATGGATCGCCCAGCCTCATCTCTaGTGGACCTTGAACAAATTT +
Preference number: 5 (lower is better)
Translates to: LGYTVPHAPSLPLHSQWIAQPHL*WTLNKF
Trigger: AAATTTGTTCAAGGTCCACAAGAGATGAGGCTGGGC...GATCCATTGTGAATGCAATGGGAGGGAAGGGGCATGTGGGACTGTGTATCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp GCCCAGCCTCATCTCTTGTGGACCTTGAACAAATTTCTCCAGCTACTGTCAAATGCCCCTTCCCTCCCATaGCATTCACAATGGATCACC +
Preference number: 5 (lower is better)
Translates to: AQPHLLWTLNKFLQLLSNAPSLP*HSQWIT
Trigger: GGTGATCCATTGTGAATGCAATGGGAGGGAAGGGGC...ATTTGACAGTAGCTGGAGAAATTTGTTCAAGGTCCACAAGAGATGAGGCTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp GAGTCTGGCCTAGTGACTTCTGACCTTTCACTTGTGATCTCTTATCCATCTTCGGCCCCTTCCCTCCCATaGCATTCACAATGGATCACC +
Preference number: 5 (lower is better)
Translates to: ESGLVTSDLSLVISYPSSAPSLP*HSQWIT
Trigger: GGTGATCCATTGTGAATGCAATGGGAGGGAAGGGGC...CGAAGATGGATAAGAGATCACAAGTGAAAGGTCAGAAGTCACTAGGCCAGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp CCTGCGTCTTCCTCAGACTGCAAAGTGGTCACCAGCAATTCAGAGAGGCTCCAGAGTACTGCAGAGATTTaGTTTATGGCCAGATTTGGG +
Preference number: 5 (lower is better)
Translates to: PASSSDCKVVTSNSERLQSTAEI*FMARFG
Trigger: CCCAAATCTGGCCATAAACAAAATCTCTGCAGTACT...CTGGAGCCTCTCTGAATTGCTGGTGACCACTTTGCAGTCTGAGGAAGACGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS TCA 90 bp GTGGGGCCCTCTTCTGCTGCTCCTACCCCAGAGAGCCAGTTCAATTaGTTACCAATGGCCAGTGGTTTAATCAATCATGCTGACATAATG +
Preference number: 5 (lower is better)
Translates to: VGPSSAAPTPESQFN*LPMASGLINHADIM
Trigger: CATTATGTCAGCATGATTGATTAAACCACTGGCCATTGGTAATCAATTGAACTGGCTCTCTGGGGTAGGAGCAGCAGAAGAGGGCCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679551.1
CDS-3UTR CAA 90 bp CCTGCGTCTTCCTCAGACTGCAAAGTGGTCACCAGCAATTCAGAGAGGCTCCAGTTGACGAGCCAATACTaGCTGTTATTCGAATTTGCT +
Preference number: 5 (lower is better)
Translates to: PASSSDCKVVTSNSERLQLTSQY*LLFEFA
Trigger: AGCAAATTCGAATAACAGCAAGTATTGGCTCGTCAA...CTGGAGCCTCTCTGAATTGCTGGTGACCACTTTGCAGTCTGAGGAAGACGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp TTGGGATACACAGTCCCACATGCCCCTTCCCTCCCATTGCATTCACAATGGATCGCGATTCCACAGTGGTaGTTCTTGTCTTTGGCTATT +
Preference number: 5 (lower is better)
Translates to: LGYTVPHAPSLPLHSQWIAIPQW*FLSLAI
Trigger: AATAGCCAAAGACAAGAACAACCACTGTGGAATCGC...GATCCATTGTGAATGCAATGGGAGGGAAGGGGCATGTGGGACTGTGTATCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp GCCCAGCCTCATCTCTTGTGGACCTTGAACAAATTTCTCCAGCTACTGTCAAATCCCTTGGTAACTTACTaGCACCTGCGTCTTCCTCAG +
Preference number: 5 (lower is better)
Translates to: AQPHLLWTLNKFLQLLSNPLVTY*HLRLPQ
Trigger: CTGAGGAAGACGCAGGTGCAAGTAAGTTACCAAGGG...ATTTGACAGTAGCTGGAGAAATTTGTTCAAGGTCCACAAGAGATGAGGCTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp TACACAGTCCCACATGCCCCTTCCCTCCCATTGCATTCACAATGGATCACCTTTGCCCAGCCTCATCTCTaGTGGACCTTGAACAAATTT +
Preference number: 5 (lower is better)
Translates to: YTVPHAPSLPLHSQWITFAQPHL*WTLNKF
Trigger: AAATTTGTTCAAGGTCCACAAGAGATGAGGCTGGGC...AAAGGTGATCCATTGTGAATGCAATGGGAGGGAAGGGGCATGTGGGACTGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp TTAGGAACGCCTTTAAGCCGTTTTCCCGCCCTGGGTGGTCCAGGTGTTCCTTGCAGTCTACTGGCTTGTTaGAAAAACGCTTTTAGACAA +
Preference number: 5 (lower is better)
Translates to: LGTPLSRFPALGGPGVPCSLLAC*KNAFRQ
Trigger: TTGTCTAAAAGCGTTTTTCAAACAAGCCAGTAGACT...GCAAGGAACACCTGGACCACCCAGGGCGGGAAAACGGCTTAAAGGCGTTCCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp TACACAGTCCCACATGCCCCTTCCCTCCCATTGCATTCACAATGGATCACCTTTTGCTGTTATTCGAATTaGCTCCTTCAAAGCCGTAGC +
Preference number: 5 (lower is better)
Translates to: YTVPHAPSLPLHSQWITFCCYSN*LLQSRS
Trigger: GCTACGGCTTTGAAGGAGCAAATTCGAATAACAGCA...AAAGGTGATCCATTGTGAATGCAATGGGAGGGAAGGGGCATGTGGGACTGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp GGTTGTTCTTGTCTTTGGCTATTTTTACATAGCCATTCGAGCCCCATTCTGGACGGACCCCAGCTGTTTTaGACGAGCCAATACTTGCTG +
Preference number: 5 (lower is better)
Translates to: GCSCLWLFLHSHSSPILDGPQLF*TSQYLL
Trigger: CAGCAAGTATTGGCTCGTCAAAAACAGCTGGGGTCC...GTCCAGAATGGGGCTCGAATGGCTATGTAAAAATAGCCAAAGACAAGAACAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000680385.1
ENST00000680787.1
CDS-3UTR CAA 90 bp TACACAGTCCCACATGCCCCTTCCCTCCCATTGCATTCACAATGGATCACCTTTGCGATTCCACAGTGGTaGTTCTTGTCTTTGGCTATT +
Preference number: 5 (lower is better)
Translates to: YTVPHAPSLPLHSQWITFAIPQW*FLSLAI
Trigger: AATAGCCAAAGACAAGAACAACCACTGTGGAATCGC...AAAGGTGATCCATTGTGAATGCAATGGGAGGGAAGGGGCATGTGGGACTGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp GCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTGCCCCTTCCCTCCCATaGCATTCACAATGGATCACC +
Preference number: 5 (lower is better)
Translates to: AFGQFQDKISPDMLSLSPAPSLP*HSQWIT
Trigger: GGTGATCCATTGTGAATGCAATGGGAGGGAAGGGGC...AGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp CCTGCGTCTTCCTCAGACTGCAAAGTGGTCACCAGCAATTCAGAGAGGCTCCAGAGTCTACTGGCTTGTTaGAAAAACGCTTTTAGACAA +
Preference number: 5 (lower is better)
Translates to: PASSSDCKVVTSNSERLQSLLAC*KNAFRQ
Trigger: TTGTCTAAAAGCGTTTTTCAAACAAGCCAGTAGACT...CTGGAGCCTCTCTGAATTGCTGGTGACCACTTTGCAGTCTGAGGAAGACGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS CCA 90 bp ATCCTTTATAATAACCTGGGTGAGTCTCATCTGAAGAATGAGTCATaGTGGTCACTGCAGGAAGGACTCTGCAGATCCAGAGTGAAGCTG +
Preference number: 5 (lower is better)
Translates to: ILYNNLGESHLKNES*WSLQEGLCRSRVKL
Trigger: CAGCTTCACTCTGGATCTGCAGAGTCCTTCCTGCAGTGACCACCATGACTCATTCTTCAGATGAGACTCACCCAGGTTATTATAAAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679551.1
CDS-3UTR CAA 90 bp TGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTGCAGCCCTGATTGCCTaGAGGACGCGAACAGTCCAC +
Preference number: 5 (lower is better)
Translates to: WILNDSTGLSYTISVWSVAALIA*RTRTVH
Trigger: GTGGACTGTTCGCGTCCTCAAGGCAATCAGGGCTGC...AACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CAA 90 bp AATTCTTCATTGGTCCAACCCATGTTCACCAAGCCGATTTGCGGGCAGAAATGGTGCTGTTATTCGAATTaGCTCCTTCAAAGCCGTAGC +
Preference number: 5 (lower is better)
Translates to: NSSLVQPMFTKPICGQKWCCYSN*LLQSRS
Trigger: GCTACGGCTTTGAAGGAGCAAATTCGAATAACAGCA...CCATTTCTGCCCGCAAATCGGCTTGGTGAACATGGGTTGGACCAATGAAGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680787.1
CDS-3UTR CAA 90 bp GCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTGGACCCCAGCTGTTTTaGACGAGCCAATACTTGCTG +
Preference number: 5 (lower is better)
Translates to: AFGQFQDKISPDMLSLSPGPQLF*TSQYLL
Trigger: CAGCAAGTATTGGCTCGTCAAAAACAGCTGGGGTCC...AGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CAA 90 bp ACTAAAAGTATTCCTTCCCAAACGAAACAAAGGCATGGGGTCTGGCTAGTTATCGGACCCCAGCTGTTTTaGACGAGCCAATACTTGCTG +
Preference number: 5 (lower is better)
Translates to: TKSIPSQTKQRHGVWLVIGPQLF*TSQYLL
Trigger: CAGCAAGTATTGGCTCGTCAAAAACAGCTGGGGTCC...GATAACTAGCCAGACCCCATGCCTTTGTTTCGTTTGGGAAGGAATACTTTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp GCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTCCCTTGGTAACTTACTaGCACCTGCGTCTTCCTCAG +
Preference number: 5 (lower is better)
Translates to: AFGQFQDKISPDMLSLSPPLVTY*HLRLPQ
Trigger: CTGAGGAAGACGCAGGTGCAAGTAAGTTACCAAGGG...AGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp TCTGACCTTTCACTTGTGATCTCTTATCCATCTTCGGCCAGAGGCCTCTTTTTGTTAGAGCCTGGGTTGTaGTTCCAAGAATCTGTGGAG +
Preference number: 5 (lower is better)
Translates to: SDLSLVISYPSSARGLFLLEPGL*FQESVE
Trigger: CTCCACAGATTCTTGGAACAACAACCCAGGCTCTAA...CAAAAAGAGGCCTCTGGCCGAAGATGGATAAGAGATCACAAGTGAAAGGTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp GAGTCTGGCCTAGTGACTTCTGACCTTTCACTTGTGATCTCTTATCCATCTTCGTTAGAGCCTGGGTTGTaGTTCCAAGAATCTGTGGAG +
Preference number: 5 (lower is better)
Translates to: ESGLVTSDLSLVISYPSSLEPGL*FQESVE
Trigger: CTCCACAGATTCTTGGAACAACAACCCAGGCTCTAA...CGAAGATGGATAAGAGATCACAAGTGAAAGGTCAGAAGTCACTAGGCCAGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp CCAGATTTGGGGGCATATCCCCAGCAAATATTGGTTAAGTCTGTGCTTCAGACTTCCTTAGAGCCTGGGTaGTTGTTCCAAGAATCTGTG +
Preference number: 5 (lower is better)
Translates to: PDLGAYPQQILVKSVLQTSLEPG*LFQESV
Trigger: CACAGATTCTTGGAACAACAACCCAGGCTCTAAGGA...AGTCTGAAGCACAGACTTAACCAATATTTGCTGGGGATATGCCCCCAAATCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp TCTGACCTTTCACTTGTGATCTCTTATCCATCTTCGGCCAGAGGCCTCTTTTTGTCCTTAGAGCCTGGGTaGTTGTTCCAAGAATCTGTG +
Preference number: 5 (lower is better)
Translates to: SDLSLVISYPSSARGLFLSLEPG*LFQESV
Trigger: CACAGATTCTTGGAACAACAACCCAGGCTCTAAGGA...CAAAAAGAGGCCTCTGGCCGAAGATGGATAAGAGATCACAAGTGAAAGGTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp GATGTTTCCTTAGAGCCTGGGTTGTTGTTCCAAGAATCTGTGGAGAGTACCAACTCCTTAGAGCCTGGGTaGTTGTTCCAAGAATCTGTG +
Preference number: 5 (lower is better)
Translates to: DVSLEPGLLFQESVESTNSLEPG*LFQESV
Trigger: CACAGATTCTTGGAACAACAACCCAGGCTCTAAGGA...GTTGGTACTCTCCACAGATTCTTGGAACAACAACCCAGGCTCTAAGGAAACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS TCA 90 bp GTCTCTTCAACTGGATCCTTTATAATAACCTGGGTGAGTCTCATCTaGAGAATGAGTCATGGTGGTCACTGCAGGAAGGACTCTGCAGAT +
Preference number: 5 (lower is better)
Translates to: VSSTGSFIITWVSLI*RMSHGGHCRKDSAD
Trigger: ATCTGCAGAGTCCTTCCTGCAGTGACCACCATGACTCATTCTTCAGATGAGACTCACCCAGGTTATTATAAAGGATCCAGTTGAAGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679551.1
CDS-3UTR CAA 90 bp GATGTTTCCTTAGAGCCTGGGTTGTTGTTCCAAGAATCTGTGGAGAGTACCAACATAATCTTCTGTGTGTaGCCTTCCACTGGTACCACT +
Preference number: 5 (lower is better)
Translates to: DVSLEPGLLFQESVESTNIIFCV*PSTGTT
Trigger: AGTGGTACCAGTGGAAGGCAACACACAGAAGATTAT...GTTGGTACTCTCCACAGATTCTTGGAACAACAACCCAGGCTCTAAGGAAACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp CCAGATTTGGGGGCATATCCCCAGCAAATATTGGTTAAGTCTGTGCTTCAGACTATAATCTTCTGTGTGTaGCCTTCCACTGGTACCACT +
Preference number: 5 (lower is better)
Translates to: PDLGAYPQQILVKSVLQTIIFCV*PSTGTT
Trigger: AGTGGTACCAGTGGAAGGCAACACACAGAAGATTAT...AGTCTGAAGCACAGACTTAACCAATATTTGCTGGGGATATGCCCCCAAATCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp GCCCAGCCTCATCTCTTGTGGACCTTGAACAAATTTCTCCAGCTACTGTCAAATTGCTGTTATTCGAATTaGCTCCTTCAAAGCCGTAGC +
Preference number: 5 (lower is better)
Translates to: AQPHLLWTLNKFLQLLSNCCYSN*LLQSRS
Trigger: GCTACGGCTTTGAAGGAGCAAATTCGAATAACAGCA...ATTTGACAGTAGCTGGAGAAATTTGTTCAAGGTCCACAAGAGATGAGGCTGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp TCTCCAGCTACTGTCAAATGCCTGAGATTTGTTAACCACACCATTTATTTTTGCGCCCCTTCCCTCCCATaGCATTCACAATGGATCACC +
Preference number: 5 (lower is better)
Translates to: SPATVKCLRFVNHTIYFCAPSLP*HSQWIT
Trigger: GGTGATCCATTGTGAATGCAATGGGAGGGAAGGGGC...GCAAAAATAAATGGTGTGGTTAACAAATCTCAGGCATTTGACAGTAGCTGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp GATGTTTCCTTAGAGCCTGGGTTGTTGTTCCAAGAATCTGTGGAGAGTACCAACGCTATCAAAGGGTTTTaGGGATACACAGTCCCACAT +
Preference number: 5 (lower is better)
Translates to: DVSLEPGLLFQESVESTNAIKGF*GYTVPH
Trigger: ATGTGGGACTGTGTATCCCAAAAACCCTTTGATAGC...GTTGGTACTCTCCACAGATTCTTGGAACAACAACCCAGGCTCTAAGGAAACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp GAGTCTGGCCTAGTGACTTCTGACCTTTCACTTGTGATCTCTTATCCATCTTCGGCTATCAAAGGGTTTTaGGGATACACAGTCCCACAT +
Preference number: 5 (lower is better)
Translates to: ESGLVTSDLSLVISYPSSAIKGF*GYTVPH
Trigger: ATGTGGGACTGTGTATCCCAAAAACCCTTTGATAGC...CGAAGATGGATAAGAGATCACAAGTGAAAGGTCAGAAGTCACTAGGCCAGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp TCTGACCTTTCACTTGTGATCTCTTATCCATCTTCGGCCAGAGGCCTCTTTTTGGCTATCAAAGGGTTTTaGGGATACACAGTCCCACAT +
Preference number: 5 (lower is better)
Translates to: SDLSLVISYPSSARGLFLAIKGF*GYTVPH
Trigger: ATGTGGGACTGTGTATCCCAAAAACCCTTTGATAGC...CAAAAAGAGGCCTCTGGCCGAAGATGGATAAGAGATCACAAGTGAAAGGTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp GGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTTCCTCCATAATCTTCTGTGTGTaGCCTTCCACTGGTACCACT +
Preference number: 5 (lower is better)
Translates to: GQFQDKISPDMLSLSPSSIIFCV*PSTGTT
Trigger: AGTGGTACCAGTGGAAGGCAACACACAGAAGATTAT...GGAGGAAGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CAA 90 bp AACAAAATACCCTTGGTAACTTACTTGCACCTGCGTCTTCCTCAGACTGCAAAGTGCTGTTATTCGAATTaGCTCCTTCAAAGCCGTAGC +
Preference number: 5 (lower is better)
Translates to: NKIPLVTYLHLRLPQTAKCCYSN*LLQSRS
Trigger: GCTACGGCTTTGAAGGAGCAAATTCGAATAACAGCA...CTTTGCAGTCTGAGGAAGACGCAGGTGCAAGTAAGTTACCAAGGGTATTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp TTCTGGACCCCAGCTGTTTTTGACGAGCCAATACTTGCTGTTATTCGAATTTGCGCGATTCCACAGTGGTaGTTCTTGTCTTTGGCTATT +
Preference number: 5 (lower is better)
Translates to: FWTPAVFDEPILAVIRICAIPQW*FLSLAI
Trigger: AATAGCCAAAGACAAGAACAACCACTGTGGAATCGC...GCAAATTCGAATAACAGCAAGTATTGGCTCGTCAAAAACAGCTGGGGTCCAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680385.1
ENST00000680787.1
CDS-3UTR CAA 90 bp GCCCAGCCTCATCTCTTGTGGACCTTGAACAAATTTCTCCAGCTACTGTCAAATCGTAACCTAACCATCTaGAGGTTATGTGTCAAAGGA +
Preference number: 5 (lower is better)
Translates to: AQPHLLWTLNKFLQLLSNRNLTI*RLCVKG
Trigger: TCCTTTGACACATAACCTCAAGATGGTTAGGTTACG...ATTTGACAGTAGCTGGAGAAATTTGTTCAAGGTCCACAAGAGATGAGGCTGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp ACAATTGAGATATCCATACACACAAGTCATGTGCTGTGTGATGTTTTGGTCAGTCCCTTGGTAACTTACTaGCACCTGCGTCTTCCTCAG +
Preference number: 5 (lower is better)
Translates to: TIEISIHTSHVLCDVLVSPLVTY*HLRLPQ
Trigger: CTGAGGAAGACGCAGGTGCAAGTAAGTTACCAAGGG...ACTGACCAAAACATCACACAGCACATGACTTGTGTGTATGGATATCTCAATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp GAGTCTGGCCTAGTGACTTCTGACCTTTCACTTGTGATCTCTTATCCATCTTCGCATCTCTTGTGGACCTaGAACAAATTTCTCCAGCTA +
Preference number: 5 (lower is better)
Translates to: ESGLVTSDLSLVISYPSSHLLWT*NKFLQL
Trigger: TAGCTGGAGAAATTTGTTCAAGGTCCACAAGAGATG...CGAAGATGGATAAGAGATCACAAGTGAAAGGTCAGAAGTCACTAGGCCAGACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp GCCCAGCCTCATCTCTTGTGGACCTTGAACAAATTTCTCCAGCTACTGTCAAATCATCTCTTGTGGACCTaGAACAAATTTCTCCAGCTA +
Preference number: 5 (lower is better)
Translates to: AQPHLLWTLNKFLQLLSNHLLWT*NKFLQL
Trigger: TAGCTGGAGAAATTTGTTCAAGGTCCACAAGAGATG...ATTTGACAGTAGCTGGAGAAATTTGTTCAAGGTCCACAAGAGATGAGGCTGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp ACTAAAAGTATTCCTTCCCAAACGAAACAAAGGCATGGGGTCTGGCTAGTTATCGCCCAGCCTCATCTCTaGTGGACCTTGAACAAATTT +
Preference number: 5 (lower is better)
Translates to: TKSIPSQTKQRHGVWLVIAQPHL*WTLNKF
Trigger: AAATTTGTTCAAGGTCCACAAGAGATGAGGCTGGGC...GATAACTAGCCAGACCCCATGCCTTTGTTTCGTTTGGGAAGGAATACTTTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp GCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTTTAGAGCCTGGGTTGTaGTTCCAAGAATCTGTGGAG +
Preference number: 5 (lower is better)
Translates to: AFGQFQDKISPDMLSLSPLEPGL*FQESVE
Trigger: CTCCACAGATTCTTGGAACAACAACCCAGGCTCTAA...AGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp TACACAGTCCCACATGCCCCTTCCCTCCCATTGCATTCACAATGGATCACCTTTAGTCTACTGGCTTGTTaGAAAAACGCTTTTAGACAA +
Preference number: 5 (lower is better)
Translates to: YTVPHAPSLPLHSQWITFSLLAC*KNAFRQ
Trigger: TTGTCTAAAAGCGTTTTTCAAACAAGCCAGTAGACT...AAAGGTGATCCATTGTGAATGCAATGGGAGGGAAGGGGCATGTGGGACTGTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp GATGTTTCCTTAGAGCCTGGGTTGTTGTTCCAAGAATCTGTGGAGAGTACCAACTATCCCCAGCAAATATaGGTTAAGTCTGTGCTTCAG +
Preference number: 5 (lower is better)
Translates to: DVSLEPGLLFQESVESTNYPQQI*VKSVLQ
Trigger: CTGAAGCACAGACTTAACCAATATTTGCTGGGGATA...GTTGGTACTCTCCACAGATTCTTGGAACAACAACCCAGGCTCTAAGGAAACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp TCTGACCTTTCACTTGTGATCTCTTATCCATCTTCGGCCAGAGGCCTCTTTTTGTATCCCCAGCAAATATaGGTTAAGTCTGTGCTTCAG +
Preference number: 5 (lower is better)
Translates to: SDLSLVISYPSSARGLFLYPQQI*VKSVLQ
Trigger: CTGAAGCACAGACTTAACCAATATTTGCTGGGGATA...CAAAAAGAGGCCTCTGGCCGAAGATGGATAAGAGATCACAAGTGAAAGGTCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp TGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTATGGCCAGGGATGGGTaGATACTTCTCTGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: WILNDSTGLSYTISVWSVMARDG*ILLWEL
Trigger: CAGCTCCCAGAGAAGTATCAACCCATCCCTGGCCAT...AACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680787.1
CDS-3UTR CAA 90 bp GGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTTCCTCCTGCCTGAATTCTTCATaGGTCATGTCACCAAAAGCA +
Preference number: 5 (lower is better)
Translates to: GQFQDKISPDMLSLSPSSCLNSS*VMSPKA
Trigger: TGCTTTTGGTGACATGACCAATGAAGAATTCAGGCA...GGAGGAAGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000259470.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CAA 90 bp GCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTTGCTGTTATTCGAATTaGCTCCTTCAAAGCCGTAGC +
Preference number: 5 (lower is better)
Translates to: AFGQFQDKISPDMLSLSPCCYSN*LLQSRS
Trigger: GCTACGGCTTTGAAGGAGCAAATTCGAATAACAGCA...AGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CAA 90 bp TCTGACCTTTCACTTGTGATCTCTTATCCATCTTCGGCCAGAGGCCTCTTTTTGTTGACGAGCCAATACTaGCTGTTATTCGAATTTGCT +
Preference number: 5 (lower is better)
Translates to: SDLSLVISYPSSARGLFLLTSQY*LLFEFA
Trigger: AGCAAATTCGAATAACAGCAAGTATTGGCTCGTCAA...CAAAAAGAGGCCTCTGGCCGAAGATGGATAAGAGATCACAAGTGAAAGGTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp TGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTGGACCCCAGCTGTTTTaGACGAGCCAATACTTGCTG +
Preference number: 5 (lower is better)
Translates to: WILNDSTGLSYTISVWSVGPQLF*TSQYLL
Trigger: CAGCAAGTATTGGCTCGTCAAAAACAGCTGGGGTCC...AACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CAA 90 bp ACTTGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGGACCCCAGCTGTTTTaGACGAGCCAATACTTGCTG +
Preference number: 5 (lower is better)
Translates to: TWILNDSTGLSYTISVWSGPQLF*TSQYLL
Trigger: CAGCAAGTATTGGCTCGTCAAAAACAGCTGGGGTCC...TGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CAA 90 bp GGACCCCAGCTGTTTTTGACGAGCCAATACTTGCTGTTATTCGAATTTGCTCCTCCACAGTGGTTGTTCTaGTCTTTGGCTATTTTTACA +
Preference number: 5 (lower is better)
Translates to: GPQLFLTSQYLLLFEFAPPQWLF*SLAIFT
Trigger: TGTAAAAATAGCCAAAGACAAGAACAACCACTGTGG...AGGAGCAAATTCGAATAACAGCAAGTATTGGCTCGTCAAAAACAGCTGGGGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000680385.1
ENST00000680787.1
CDS-3UTR CAA 90 bp CCAGATTTGGGGGCATATCCCCAGCAAATATTGGTTAAGTCTGTGCTTCAGACTCCACAGTGGTTGTTCTaGTCTTTGGCTATTTTTACA +
Preference number: 5 (lower is better)
Translates to: PDLGAYPQQILVKSVLQTPQWLF*SLAIFT
Trigger: TGTAAAAATAGCCAAAGACAAGAACAACCACTGTGG...AGTCTGAAGCACAGACTTAACCAATATTTGCTGGGGATATGCCCCCAAATCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp GCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTGCGATTCCACAGTGGTaGTTCTTGTCTTTGGCTATT +
Preference number: 5 (lower is better)
Translates to: AFGQFQDKISPDMLSLSPAIPQW*FLSLAI
Trigger: AATAGCCAAAGACAAGAACAACCACTGTGGAATCGC...AGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CAA 90 bp GGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTTCCTCCTCCACTGGTACCACTTaGTATCCAAATTTTGGTCAA +
Preference number: 5 (lower is better)
Translates to: GQFQDKISPDMLSLSPSSSTGTT*YPNFGQ
Trigger: TTGACCAAAATTTGGATACAAAGTGGTACCAGTGGA...GGAGGAAGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CAA 90 bp GATCTCTCAGACTTAACAAAGAACCAGCAGAGGCAGATGTTTCTGCTTACTATTATAATCTTCTGTGTGTaGCCTTCCACTGGTACCACT +
Preference number: 5 (lower is better)
Translates to: DLSDLTKNQQRQMFLLTIIIFCV*PSTGTT
Trigger: AGTGGTACCAGTGGAAGGCAACACACAGAAGATTAT...AATAGTAAGCAGAAACATCTGCCTCTGCTGGTTCTTTGTTAAGTCTGAGAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681330.1
CDS-3UTR CAA 90 bp ACTAAAAGTATTCCTTCCCAAACGAAACAAAGGCATGGGGTCTGGCTAGTTATCTGCCTGAATTCTTCATaGGTCATGTCACCAAAAGCA +
Preference number: 5 (lower is better)
Translates to: TKSIPSQTKQRHGVWLVICLNSS*VMSPKA
Trigger: TGCTTTTGGTGACATGACCAATGAAGAATTCAGGCA...GATAACTAGCCAGACCCCATGCCTTTGTTTCGTTTGGGAAGGAATACTTTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000259470.6
ENST00000680385.1
ENST00000681927.1
CDS-3UTR CAA 90 bp GGTTGTTCTTGTCTTTGGCTATTTTTACATAGCCATTCGAGCCCCATTCTGGACTTGACGAGCCAATACTaGCTGTTATTCGAATTTGCT +
Preference number: 5 (lower is better)
Translates to: GCSCLWLFLHSHSSPILDLTSQY*LLFEFA
Trigger: AGCAAATTCGAATAACAGCAAGTATTGGCTCGTCAA...GTCCAGAATGGGGCTCGAATGGCTATGTAAAAATAGCCAAAGACAAGAACAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680385.1
ENST00000680787.1
CDS-3UTR CAA 90 bp ATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTTCAGGACCCCAGCTGTTTTaGACGAGCCAATACTTGCTG +
Preference number: 5 (lower is better)
Translates to: ILNDSTGLSYTISVWSVSGPQLF*TSQYLL
Trigger: CAGCAAGTATTGGCTCGTCAAAAACAGCTGGGGTCC...TGAAACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CAA 90 bp GGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTTCCTCCCCACAGTGGTTGTTCTaGTCTTTGGCTATTTTTACA +
Preference number: 5 (lower is better)
Translates to: GQFQDKISPDMLSLSPSSPQWLF*SLAIFT
Trigger: TGTAAAAATAGCCAAAGACAAGAACAACCACTGTGG...GGAGGAAGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CAA 90 bp ATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTTCACCCTTGGTAACTTACTaGCACCTGCGTCTTCCTCAG +
Preference number: 5 (lower is better)
Translates to: ILNDSTGLSYTISVWSVSPLVTY*HLRLPQ
Trigger: CTGAGGAAGACGCAGGTGCAAGTAAGTTACCAAGGG...TGAAACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp ACAATTGAGATATCCATACACACAAGTCATGTGCTGTGTGATGTTTTGGTCAGTTCCTTAGAGCCTGGGTaGTTGTTCCAAGAATCTGTG +
Preference number: 5 (lower is better)
Translates to: TIEISIHTSHVLCDVLVSSLEPG*LFQESV
Trigger: CACAGATTCTTGGAACAACAACCCAGGCTCTAAGGA...ACTGACCAAAACATCACACAGCACATGACTTGTGTGTATGGATATCTCAATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp GCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTAGTACTGCAGAGATTTaGTTTATGGCCAGATTTGGG +
Preference number: 5 (lower is better)
Translates to: AFGQFQDKISPDMLSLSPSTAEI*FMARFG
Trigger: CCCAAATCTGGCCATAAACAAAATCTCTGCAGTACT...AGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp GCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTTTGACGAGCCAATACTaGCTGTTATTCGAATTTGCT +
Preference number: 5 (lower is better)
Translates to: AFGQFQDKISPDMLSLSPLTSQY*LLFEFA
Trigger: AGCAAATTCGAATAACAGCAAGTATTGGCTCGTCAA...AGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CAA 90 bp GCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCTTAAGTCCTCCACAGTGGTTGTTCTaGTCTTTGGCTATTTTTACA +
Preference number: 5 (lower is better)
Translates to: AFGQFQDKISPDMLSLSPPQWLF*SLAIFT
Trigger: TGTAAAAATAGCCAAAGACAAGAACAACCACTGTGG...AGGACTTAAGGACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CAA 90 bp CTTCACTTTTTATCACGTAACCTAACCATCTTGAGGTTATGTGTCAAAGGAAGAGCCCAGCCTCATCTCTaGTGGACCTTGAACAAATTT +
Preference number: 5 (lower is better)
Translates to: LHFLSRNLTILRLCVKGRAQPHL*WTLNKF
Trigger: AAATTTGTTCAAGGTCCACAAGAGATGAGGCTGGGC...TCTTCCTTTGACACATAACCTCAAGATGGTTAGGTTACGTGATAAAAAGTGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp ACAATTGAGATATCCATACACACAAGTCATGTGCTGTGTGATGTTTTGGTCAGTGCTATCAAAGGGTTTTaGGGATACACAGTCCCACAT +
Preference number: 5 (lower is better)
Translates to: TIEISIHTSHVLCDVLVSAIKGF*GYTVPH
Trigger: ATGTGGGACTGTGTATCCCAAAAACCCTTTGATAGC...ACTGACCAAAACATCACACAGCACATGACTTGTGTGTATGGATATCTCAATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp TGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTGTCCTTCCCAGTCTGTaGCATTCAGGAATTCTTCCT +
Preference number: 5 (lower is better)
Translates to: WILNDSTGLSYTISVWSVVLPSL*HSGILP
Trigger: AGGAAGAATTCCTGAATGCAACAGACTGGGAAGGAC...AACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679661.1
CDS-3UTR CAA 90 bp TGCAAAGACGAAGGAATCCTTTCTCAGAGAAAACTCAAGACTGAATATGGTAGATGCCTGAATTCTTCATaGGTCATGTCACCAAAAGCA +
Preference number: 5 (lower is better)
Translates to: CKDEGILSQRKLKTEYGRCLNSS*VMSPKA
Trigger: TGCTTTTGGTGACATGACCAATGAAGAATTCAGGCA...TCTACCATATTCAGTCTTGAGTTTTCTCTGAGAAAGGATTCCTTCGTCTTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259470.6
ENST00000680385.1
ENST00000681927.1
CDS-3UTR CAA 90 bp CTTCACTTTTTATCACGTAACCTAACCATCTTGAGGTTATGTGTCAAAGGAAGATGCTGTTATTCGAATTaGCTCCTTCAAAGCCGTAGC +
Preference number: 5 (lower is better)
Translates to: LHFLSRNLTILRLCVKGRCCYSN*LLQSRS
Trigger: GCTACGGCTTTGAAGGAGCAAATTCGAATAACAGCA...TCTTCCTTTGACACATAACCTCAAGATGGTTAGGTTACGTGATAAAAAGTGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp TGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTTGCTGTTATTCGAATTaGCTCCTTCAAAGCCGTAGC +
Preference number: 5 (lower is better)
Translates to: WILNDSTGLSYTISVWSVCCYSN*LLQSRS
Trigger: GCTACGGCTTTGAAGGAGCAAATTCGAATAACAGCA...AACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CAA 90 bp CTGTGCTTCAGACTAGATTTTTCAAGTCTACTGGCTTGTTTGAAAAACGCTTTTGCGATTCCACAGTGGTaGTTCTTGTCTTTGGCTATT +
Preference number: 5 (lower is better)
Translates to: LCFRLDFSSLLACLKNAFAIPQW*FLSLAI
Trigger: AATAGCCAAAGACAAGAACAACCACTGTGGAATCGC...AAAAGCGTTTTTCAAACAAGCCAGTAGACTTGAAAAATCTAGTCTGAAGCACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp ACAATTGAGATATCCATACACACAAGTCATGTGCTGTGTGATGTTTTGGTCAGTCATCTCTTGTGGACCTaGAACAAATTTCTCCAGCTA +
Preference number: 5 (lower is better)
Translates to: TIEISIHTSHVLCDVLVSHLLWT*NKFLQL
Trigger: TAGCTGGAGAAATTTGTTCAAGGTCCACAAGAGATG...ACTGACCAAAACATCACACAGCACATGACTTGTGTGTATGGATATCTCAATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp TCTCCAGCTACTGTCAAATGCCTGAGATTTGTTAACCACACCATTTATTTTTGCCATCTCTTGTGGACCTaGAACAAATTTCTCCAGCTA +
Preference number: 5 (lower is better)
Translates to: SPATVKCLRFVNHTIYFCHLLWT*NKFLQL
Trigger: TAGCTGGAGAAATTTGTTCAAGGTCCACAAGAGATG...GCAAAAATAAATGGTGTGGTTAACAAATCTCAGGCATTTGACAGTAGCTGGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp ATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTTCATTAGAGCCTGGGTTGTaGTTCCAAGAATCTGTGGAG +
Preference number: 5 (lower is better)
Translates to: ILNDSTGLSYTISVWSVSLEPGL*FQESVE
Trigger: CTCCACAGATTCTTGGAACAACAACCCAGGCTCTAA...TGAAACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp ATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTTCATCCTTAGAGCCTGGGTaGTTGTTCCAAGAATCTGTG +
Preference number: 5 (lower is better)
Translates to: ILNDSTGLSYTISVWSVSSLEPG*LFQESV
Trigger: CACAGATTCTTGGAACAACAACCCAGGCTCTAAGGA...TGAAACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp TGCAAAGACGAAGGAATCCTTTCTCAGAGAAAACTCAAGACTGAATATGGTAGAAGTACTGCAGAGATTTaGTTTATGGCCAGATTTGGG +
Preference number: 5 (lower is better)
Translates to: CKDEGILSQRKLKTEYGRSTAEI*FMARFG
Trigger: CCCAAATCTGGCCATAAACAAAATCTCTGCAGTACT...TCTACCATATTCAGTCTTGAGTTTTCTCTGAGAAAGGATTCCTTCGTCTTTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp ACTTGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCATGCCTGAATTCTTCATaGGTCATGTCACCAAAAGCA +
Preference number: 5 (lower is better)
Translates to: TWILNDSTGLSYTISVWSCLNSS*VMSPKA
Trigger: TGCTTTTGGTGACATGACCAATGAAGAATTCAGGCA...TGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259470.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CAA 90 bp ATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTTCAGCGATTCCACAGTGGTaGTTCTTGTCTTTGGCTATT +
Preference number: 5 (lower is better)
Translates to: ILNDSTGLSYTISVWSVSAIPQW*FLSLAI
Trigger: AATAGCCAAAGACAAGAACAACCACTGTGGAATCGC...TGAAACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CAA 90 bp TGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTTATCCCCAGCAAATATaGGTTAAGTCTGTGCTTCAG +
Preference number: 5 (lower is better)
Translates to: WILNDSTGLSYTISVWSVYPQQI*VKSVLQ
Trigger: CTGAAGCACAGACTTAACCAATATTTGCTGGGGATA...AACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp CTTCACTTTTTATCACGTAACCTAACCATCTTGAGGTTATGTGTCAAAGGAAGAAGTACTGCAGAGATTTaGTTTATGGCCAGATTTGGG +
Preference number: 5 (lower is better)
Translates to: LHFLSRNLTILRLCVKGRSTAEI*FMARFG
Trigger: CCCAAATCTGGCCATAAACAAAATCTCTGCAGTACT...TCTTCCTTTGACACATAACCTCAAGATGGTTAGGTTACGTGATAAAAAGTGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp AGTCTACTGGCTTGTTTGAAAAACGCTTTTAGACAACACATCAGGTTTGTAACTAGTACTGCAGAGATTTaGTTTATGGCCAGATTTGGG +
Preference number: 5 (lower is better)
Translates to: SLLACLKNAFRQHIRFVTSTAEI*FMARFG
Trigger: CCCAAATCTGGCCATAAACAAAATCTCTGCAGTACT...AGTTACAAACCTGATGTGTTGTCTAAAAGCGTTTTTCAAACAAGCCAGTAGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp ACTTGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCATCCACTGGTACCACTTaGTATCCAAATTTTGGTCAA +
Preference number: 5 (lower is better)
Translates to: TWILNDSTGLSYTISVWSSTGTT*YPNFGQ
Trigger: TTGACCAAAATTTGGATACAAAGTGGTACCAGTGGA...TGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CAA 90 bp TTACACAATAAGCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTTCCACTGGTACCACTTaGTATCCAAATTTTGGTCAA +
Preference number: 5 (lower is better)
Translates to: LHNKRLVSFKIKFPQTCCSTGTT*YPNFGQ
Trigger: TTGACCAAAATTTGGATACAAAGTGGTACCAGTGGA...ACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGCTTATTGTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CAA 90 bp ATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTTCATGCCTGAATTCTTCATaGGTCATGTCACCAAAAGCA +
Preference number: 5 (lower is better)
Translates to: ILNDSTGLSYTISVWSVSCLNSS*VMSPKA
Trigger: TGCTTTTGGTGACATGACCAATGAAGAATTCAGGCA...TGAAACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000259470.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CAA 90 bp ACTTGGATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCATTGACGAGCCAATACTaGCTGTTATTCGAATTTGCT +
Preference number: 5 (lower is better)
Translates to: TWILNDSTGLSYTISVWSLTSQY*LLFEFA
Trigger: AGCAAATTCGAATAACAGCAAGTATTGGCTCGTCAA...TGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGATCCAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CAA 90 bp TTACACAATAAGCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTTTGACGAGCCAATACTaGCTGTTATTCGAATTTGCT +
Preference number: 5 (lower is better)
Translates to: LHNKRLVSFKIKFPQTCCLTSQY*LLFEFA
Trigger: AGCAAATTCGAATAACAGCAAGTATTGGCTCGTCAA...ACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGCTTATTGTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CAA 90 bp AGTCTACTGGCTTGTTTGAAAAACGCTTTTAGACAACACATCAGGTTTGTAACTTTGACGAGCCAATACTaGCTGTTATTCGAATTTGCT +
Preference number: 5 (lower is better)
Translates to: SLLACLKNAFRQHIRFVTLTSQY*LLFEFA
Trigger: AGCAAATTCGAATAACAGCAAGTATTGGCTCGTCAA...AGTTACAAACCTGATGTGTTGTCTAAAAGCGTTTTTCAAACAAGCCAGTAGACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp TTACACAATAAGCGTTTGGTCAGTTTCAAGATAAAATTTCCCCAGACATGCTGTCCACAGTGGTTGTTCTaGTCTTTGGCTATTTTTACA +
Preference number: 5 (lower is better)
Translates to: LHNKRLVSFKIKFPQTCCPQWLF*SLAIFT
Trigger: TGTAAAAATAGCCAAAGACAAGAACAACCACTGTGG...ACAGCATGTCTGGGGAAATTTTATCTTGAAACTGACCAAACGCTTATTGTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CAA 90 bp ATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTTCACGTAACCTAACCATCTaGAGGTTATGTGTCAAAGGA +
Preference number: 5 (lower is better)
Translates to: ILNDSTGLSYTISVWSVSRNLTI*RLCVKG
Trigger: TCCTTTGACACATAACCTCAAGATGGTTAGGTTACG...TGAAACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp ACAATTGAGATATCCATACACACAAGTCATGTGCTGTGTGATGTTTTGGTCAGTAGTCTACTGGCTTGTTaGAAAAACGCTTTTAGACAA +
Preference number: 5 (lower is better)
Translates to: TIEISIHTSHVLCDVLVSSLLAC*KNAFRQ
Trigger: TTGTCTAAAAGCGTTTTTCAAACAAGCCAGTAGACT...ACTGACCAAAACATCACACAGCACATGACTTGTGTGTATGGATATCTCAATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp TCTCCAGCTACTGTCAAATGCCTGAGATTTGTTAACCACACCATTTATTTTTGCAGTCTACTGGCTTGTTaGAAAAACGCTTTTAGACAA +
Preference number: 5 (lower is better)
Translates to: SPATVKCLRFVNHTIYFCSLLAC*KNAFRQ
Trigger: TTGTCTAAAAGCGTTTTTCAAACAAGCCAGTAGACT...GCAAAAATAAATGGTGTGGTTAACAAATCTCAGGCATTTGACAGTAGCTGGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp ATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTTCATATCCCCAGCAAATATaGGTTAAGTCTGTGCTTCAG +
Preference number: 5 (lower is better)
Translates to: ILNDSTGLSYTISVWSVSYPQQI*VKSVLQ
Trigger: CTGAAGCACAGACTTAACCAATATTTGCTGGGGATA...TGAAACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000680385.1
ENST00000680490.1
ENST00000681927.1
CDS-3UTR CAA 90 bp ATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTTCATCCACTGGTACCACTTaGTATCCAAATTTTGGTCAA +
Preference number: 5 (lower is better)
Translates to: ILNDSTGLSYTISVWSVSSTGTT*YPNFGQ
Trigger: TTGACCAAAATTTGGATACAAAGTGGTACCAGTGGA...TGAAACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CAA 90 bp ATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTTCATTGACGAGCCAATACTaGCTGTTATTCGAATTTGCT +
Preference number: 5 (lower is better)
Translates to: ILNDSTGLSYTISVWSVSLTSQY*LLFEFA
Trigger: AGCAAATTCGAATAACAGCAAGTATTGGCTCGTCAA...TGAAACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS-3UTR CAA 90 bp ATCCTCAATGATTCAACTGGTTTATCTTACACAATAAGCGTTTGGTCAGTTTCACCACAGTGGTTGTTCTaGTCTTTGGCTATTTTTACA +
Preference number: 5 (lower is better)
Translates to: ILNDSTGLSYTISVWSVSPQWLF*SLAIFT
Trigger: TGTAAAAATAGCCAAAGACAAGAACAACCACTGTGG...TGAAACTGACCAAACGCTTATTGTGTAAGATAAACCAGTTGAATCATTGAGGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000259470.6
ENST00000538255.6
ENST00000679661.1
ENST00000680221.1
ENST00000680385.1
ENST00000680490.1
ENST00000680787.1
ENST00000681737.1
ENST00000681927.1
CDS TCA 72 bp CTCCCGGGTTCACGTCATTCTCCTGCCTCAGTCTCCTaGGTAGCTGGGACTACGGGCACCCGCCACCAGGCC +
Preference number: 6 (lower is better)
Translates to: LPGSRHSPASVS*VAGTTGTRHQA
Trigger: GGCCTGGTGGCGGGTGCCCGTAGTCCCAGCTACTCAGGAGACTGAGGCAGGAGAATGACGTGAACCCGGGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680435.1
CDS GCA 72 bp GTCTGGTCGGGGGCGCTCACCAGCAGCCGTCGCAGCTaGGCAGGCACCCTCAGCAAACAAGCCTCTGAGATT +
Preference number: 6 (lower is better)
Translates to: VWSGALTSSRRS*AGTLSKQASEI
Trigger: AATCTCAGAGGCTTGTTTGCTGAGGGTGCCTGCGCAGCTGCGACGGCTGCTGGTGAGCGCCCCCGACCAGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000680787.1
ENST00000681737.1
CDS TCA 72 bp TCGCAGCTGCGCAGGCACCCTCAGCAAACAAGCCTCTaGGATTACAGACGTCCGCGGTCTGGTGCAGGTTCG +
Preference number: 6 (lower is better)
Translates to: SQLRRHPQQTSL*DYRRPRSGAGS
Trigger: CGAACCTGCACCAGACCGCGGACGTCTGTAATCTCAGAGGCTTGTTTGCTGAGGGTGCCTGCGCAGCTGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680159.1
CDS CCA 72 bp TCTTCCCCCGTACCTTGGCCTGCGCGTCTCTTCAACTaGATCCTTTATAATAACCTGGGTGAGTCTCATCTG +
Preference number: 6 (lower is better)
Translates to: SSPVPWPARLFN*ILYNNLGESHL
Trigger: CAGATGAGACTCACCCAGGTTATTATAAAGGATCCAGTTGAAGAGACGCGCAGGCCAAGGTACGGGGGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679551.1
CDS TCA 72 bp CCAAAAAGGACAGGATTCAGAGAGCTTCCAGATGGCTaGACACACGGAGGTTCCTGGTGGGTAATACATGGA +
Preference number: 6 (lower is better)
Translates to: PKRTGFRELPDG*THGGSWWVIHG
Trigger: TCCATGTATTACCCACCAGGAACCTCCGTGTGTTCAGCCATCTGGAAGCTCTCTGAATCCTGTCCTTTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679551.1
CDS TCA 72 bp AATTCTTCCTTCTCCCATGTCTGGGTGAGTCTCATCTaGAGAATGAGTCATGGTGGTCACTGCAGGAAGGAC +
Preference number: 6 (lower is better)
Translates to: NSSFSHVWVSLI*RMSHGGHCRKD
Trigger: GTCCTTCCTGCAGTGACCACCATGACTCATTCTTCAGATGAGACTCACCCAGACATGGGAGAAGGAAGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681517.1
CDS GCA 72 bp GCGAAAGATTCATGTTTCAAAACCATCCCAAGTAGATaGAAGCGGATCCCCAAGGAACACCACCTCACACCT +
Preference number: 6 (lower is better)
Translates to: AKDSCFKTIPSR*KRIPKEHHLTP
Trigger: AGGTGTGAGGTGGTGTTCCTTGGGGATCCGCTTGCATCTACTTGGGATGGTTTTGAAACATGAATCTTTCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479932.2
ENST00000681927.1
CDS TCA 72 bp ACTGGATCCTTTATAATAACCTGGGTGAGTCTCATCTaGAGAATGAGTCATGGTGGTCACTGCAGGAAGGAC +
Preference number: 6 (lower is better)
Translates to: TGSFIITWVSLI*RMSHGGHCRKD
Trigger: GTCCTTCCTGCAGTGACCACCATGACTCATTCTTCAGATGAGACTCACCCAGGTTATTATAAAGGATCCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679551.1
CDS TCA 72 bp TCTTCTGCTGCTCCTACCCCAGAGAGCCAGTTCAATTaGTTACCAATGGCCAGTGGTTTAATCAATCATGCT +
Preference number: 6 (lower is better)
Translates to: SSAAPTPESQFN*LPMASGLINHA
Trigger: AGCATGATTGATTAAACCACTGGCCATTGGTAATCAATTGAACTGGCTCTCTGGGGTAGGAGCAGCAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679551.1