RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CTSS (Homo sapiens)

Ensembl gene IDs: ENSG00000163131

Ensembl transcript IDs: ENST00000368985.8, ENST00000448301.7, ENST00000472977.7, ENST00000480760.2, ENST00000483930.2, ENST00000607427.2, ENST00000679512.1, ENST00000679582.1, ENST00000679898.1, ENST00000680288.1, ENST00000680311.1, ENST00000680466.1, ENST00000680471.1, ENST00000680664.1, ENST00000680931.1, ENST00000681444.1, ENST00000681728.1, ENST00000681863.1

Found 630 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp TGGCGTGATCTCGGCTCACTGCACCTCCACCTCCTGAGTTCAAGCGATTCTCCTCTCAAGCAATTGGCATaGTGGCAAGCCCAGCACAGT +
Preference number: 2 (lower is better)
Translates to: WRDLGSLHLHLLSSSDSPLKQLA*WQAQHS
Trigger: ACTGTGCTGGGCTTGCCACCATGCCAATTGCTTGAG...AGGAGAATCGCTTGAACTCAGGAGGTGGAGGTGCAGTGAGCCGAGATCACGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679582.1
3UTR-3UTR CCA 90 bp TGGCGTGATCTCGGCTCACTGCACCTCCACCTCCTGAGTTCAAGCGATTCTCCTTGCTTCTCAAGCAATTaGCATGGTGGCAAGCCCAGC +
Preference number: 2 (lower is better)
Translates to: WRDLGSLHLHLLSSSDSPCFSSN*HGGKPS
Trigger: GCTGGGCTTGCCACCATGCCAATTGCTTGAGAAGCA...AGGAGAATCGCTTGAACTCAGGAGGTGGAGGTGCAGTGAGCCGAGATCACGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679582.1
3UTR-3UTR CCA 90 bp CCAGGCTGCTCTTTAACTCCTGGCCTCAAGTTGATATGCCTGCCTTGGCCTCCCTTGATATGCCTGCCTTaGCCTCCCAAGTACTGGGAT +
Preference number: 2 (lower is better)
Translates to: PGCSLTPGLKLICLPWPPLICLP*PPKYWD
Trigger: ATCCCAGTACTTGGGAGGCCAAGGCAGGCATATCAA...GGGAGGCCAAGGCAGGCATATCAACTTGAGGCCAGGAGTTAAAGAGCAGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
3UTR-3UTR TCA 90 bp TCCCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCAAGGCAGAAGTTGCAGTaGACTGAGATGGTGCCACTG +
Preference number: 2 (lower is better)
Translates to: SQVLWLLLGRTAGRRSESRQKLQ*TEMVPL
Trigger: CAGTGGCACCATCTCAGTTCACTGCAACTTCTGCCT...TGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR-3UTR GCA 90 bp TCCCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCACCTGTCTTAGACATCTaGATAGCAGGGACCACAGGC +
Preference number: 2 (lower is better)
Translates to: SQVLWLLLGRTAGRRSESPVLDI*IAGTTG
Trigger: GCCTGTGGTCCCTGCTATGCAGATGTCTAAGACAGG...TGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR-3UTR CCA 90 bp TCCCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCATTGATATGCCTGCCTTaGCCTCCCAAGTACTGGGAT +
Preference number: 2 (lower is better)
Translates to: SQVLWLLLGRTAGRRSESLICLP*PPKYWD
Trigger: ATCCCAGTACTTGGGAGGCCAAGGCAGGCATATCAA...TGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR-3UTR CCA 90 bp CCAGGCTGCTCTTTAACTCCTGGCCTCAAGTTGATATGCCTGCCTTGGCCTCCCTCTTCACCAAAGTTGTaGCCCCAGCTGTTTTTCACA +
Preference number: 2 (lower is better)
Translates to: PGCSLTPGLKLICLPWPPSSPKL*PQLFFT
Trigger: TGTGAAAAACAGCTGGGGCCACAACTTTGGTGAAGA...GGGAGGCCAAGGCAGGCATATCAACTTGAGGCCAGGAGTTAAAGAGCAGCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000483930.2
ENST00000680471.1
3UTR-3UTR TCA 90 bp AGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTACCTCCTGGGCTCTTGTaGTCCTCCTGTCTTAGACAT +
Preference number: 2 (lower is better)
Translates to: RMLLFSGCQESTSYMTVLPPGLL*SSCLRH
Trigger: ATGTCTAAGACAGGAGGATCACAAGAGCCCAGGAGG...TAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR-3UTR TCA 90 bp AGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTAAGGCAGAAGTTGCAGTaGACTGAGATGGTGCCACTG +
Preference number: 2 (lower is better)
Translates to: RMLLFSGCQESTSYMTVLRQKLQ*TEMVPL
Trigger: CAGTGGCACCATCTCAGTTCACTGCAACTTCTGCCT...TAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR-3UTR GCA 90 bp GATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGTCGGGAGGCAGAAGTTaGAGTGAACTGAGATGGTGC +
Preference number: 2 (lower is better)
Translates to: DAPFLWVPGEHLLHDSLMSGGRS*SELRWC
Trigger: GCACCATCTCAGTTCACTGCAACTTCTGCCTCCCGA...CATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR-3UTR GCA 90 bp AGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTACCCAGGTTTTATGGCTaGTTCTGGGGAGAACAGCAG +
Preference number: 2 (lower is better)
Translates to: RMLLFSGCQESTSYMTVLPRFYG*FWGEQQ
Trigger: CTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGGG...TAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR-3UTR GCA 90 bp GATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGCCCAGGTTTTATGGCTaGTTCTGGGGAGAACAGCAG +
Preference number: 2 (lower is better)
Translates to: DAPFLWVPGEHLLHDSLMPRFYG*FWGEQQ
Trigger: CTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGGG...CATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR-3UTR CCA 90 bp GGTAAGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCAGGCTGGAGTACAGTaGTGTGATCTCAGCTCAACA +
Preference number: 2 (lower is better)
Translates to: GKDAPFLWVPGEHLLHDSQAGVQ*CDLSST
Trigger: TGTTGAGCTGAGATCACACCACTGTACTCCAGCCTG...ACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR-3UTR CCA 90 bp GATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGGTAATCTTAGCACTTTaGGAGGCTGGGGTGGGTGGA +
Preference number: 2 (lower is better)
Translates to: DAPFLWVPGEHLLHDSLMVILAL*EAGVGG
Trigger: TCCACCCACCCCAGCCTCCCAAAGTGCTAAGATTAC...CATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR-3UTR GCA 90 bp GAGTACAGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGCTTAAAGGCAGAGGTTaGGGTGAGCTGAGATCATGC +
Preference number: 2 (lower is better)
Translates to: EYSGVISAQHSLNLLGSRLKGRG*GELRSC
Trigger: GCATGATCTCAGCTCACCGCAACCTCTGCCTTTAAG...CCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACTGTACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680931.1
3UTR-3UTR CCA 90 bp ATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGTTGATATGCCTGCCTTaGCCTCCCAAGTACTGGGAT +
Preference number: 2 (lower is better)
Translates to: ISAQHSLNLLGSRNLVPQLICLP*PPKYWD
Trigger: ATCCCAGTACTTGGGAGGCCAAGGCAGGCATATCAA...CTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
3UTR-3UTR CCA 90 bp GCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCTTGATATGCCTGCCTTaGCCTCCCAAGTACTGGGAT +
Preference number: 2 (lower is better)
Translates to: APFLWVPGEHLLHDSLMILICLP*PPKYWD
Trigger: ATCCCAGTACTTGGGAGGCCAAGGCAGGCATATCAA...GATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR-3UTR CCA 90 bp GAGTACAGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGTTGATATGCCTGCCTTaGCCTCCCAAGTACTGGGAT +
Preference number: 2 (lower is better)
Translates to: EYSGVISAQHSLNLLGSRLICLP*PPKYWD
Trigger: ATCCCAGTACTTGGGAGGCCAAGGCAGGCATATCAA...CCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACTGTACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
3UTR-3UTR CCA 90 bp GATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGCAGGCTGGAGTACAGTaGTGTGATCTCAGCTCAACA +
Preference number: 2 (lower is better)
Translates to: DAPFLWVPGEHLLHDSLMQAGVQ*CDLSST
Trigger: TGTTGAGCTGAGATCACACCACTGTACTCCAGCCTG...CATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR-3UTR CCA 90 bp GAGTACAGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGCAGGCTGGAGTACAGTaGTGTGATCTCAGCTCAACA +
Preference number: 2 (lower is better)
Translates to: EYSGVISAQHSLNLLGSRQAGVQ*CDLSST
Trigger: TGTTGAGCTGAGATCACACCACTGTACTCCAGCCTG...CCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACTGTACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
3UTR-3UTR GCA 90 bp CAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCCTCCTGAGGCAGAAGAATTaGTTGAACCTTAAAGGCAGA +
Preference number: 2 (lower is better)
Translates to: QLNIASTSWVQGISCLSLLRQKN*LNLKGR
Trigger: TCTGCCTTTAAGGTTCAAGCAATTCTTCTGCCTCAG...GAGGCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680931.1
3UTR-3UTR CCA 90 bp GATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGCCAGCCTGGCTAATGTaGCAAAACCCTGTCTTTACT +
Preference number: 2 (lower is better)
Translates to: DAPFLWVPGEHLLHDSLMPAWLM*QNPVFT
Trigger: AGTAAAGACAGGGTTTTGCCACATTAGCCAGGCTGG...CATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR-3UTR CCA 90 bp GATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGAGTTTGAGACCAGCCTaGCTAATGTGGCAAAACCCT +
Preference number: 2 (lower is better)
Translates to: DAPFLWVPGEHLLHDSLMSLRPA*LMWQNP
Trigger: AGGGTTTTGCCACATTAGCCAGGCTGGTCTCAAACT...CATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR-3UTR TCA 90 bp ATTCTGGTTGGCTCAGTTATTTGCCAAATAAAGGCCCTGGTCAAATTGTTGATGTGTCCAGGCTGGTCTTaGACTCCTGGGCTCAAGACG +
Preference number: 2 (lower is better)
Translates to: ILVGSVICQIKALVKLLMCPGWS*TPGLKT
Trigger: CGTCTTGAGCCCAGGAGTTCAAGACCAGCCTGGACA...CATCAACAATTTGACCAGGGCCTTTATTTGGCAAATAACTGAGCCAACCAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR-3UTR TCA 90 bp GAGTACAGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGGGCAGAAGAATTGCTTaGACCTTAAAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: EYSGVISAQHSLNLLGSRGRRIA*TLKAEV
Trigger: AACCTCTGCCTTTAAGGTTCAAGCAATTCTTCTGCC...CCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACTGTACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680931.1
3UTR-3UTR GCA 90 bp AGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGAAACAGTCCTGTCTTAGACATCTaGATAGCAGGGACCACAGGC +
Preference number: 2 (lower is better)
Translates to: SFTRHEGLHKEIKAQRNSPVLDI*IAGTTG
Trigger: GCCTGTGGTCCCTGCTATGCAGATGTCTAAGACAGG...ACTGTTTCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR-3UTR GCA 90 bp GATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGGTTGGCTCAGTTATTTaGCAAATAAAGGCCCTGGTC +
Preference number: 2 (lower is better)
Translates to: DAPFLWVPGEHLLHDSLMVGSVI*QIKALV
Trigger: GACCAGGGCCTTTATTTGGCAAATAACTGAGCCAAC...CATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR-3UTR GCA 90 bp TCCCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCAAAAGTTCCTGCTGCCTaGTTAGATGCATCTACTAAT +
Preference number: 2 (lower is better)
Translates to: SQVLWLLLGRTAGRRSESKVPAA*LDASTN
Trigger: ATTAGTAGATGCATCTAAGCAGGCAGCAGGAACTTT...TGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR-3UTR GCA 90 bp AGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGAAACAGTTCGGGAGGCAGAAGTTaGAGTGAACTGAGATGGTGC +
Preference number: 2 (lower is better)
Translates to: SFTRHEGLHKEIKAQRNSSGGRS*SELRWC
Trigger: GCACCATCTCAGTTCACTGCAACTTCTGCCTCCCGA...ACTGTTTCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR-3UTR CCA 90 bp GTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTTCTTCACCAAAGTTGTaGCCCCAGCTGTTTTTCACA +
Preference number: 2 (lower is better)
Translates to: VISAQHSLNLLGSRNLVPSSPKL*PQLFFT
Trigger: TGTGAAAAACAGCTGGGGCCACAACTTTGGTGAAGA...AGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000483930.2
ENST00000680471.1
3UTR-3UTR TCA 90 bp TCCCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCAAATTATGTTAAAAACTaGAAAGTAGGCTGGGCTCAG +
Preference number: 2 (lower is better)
Translates to: SQVLWLLLGRTAGRRSESNYVKN*KVGWAQ
Trigger: CTGAGCCCAGCCTACTTTTCAGTTTTTAACATAATT...TGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR-3UTR TCA 90 bp TCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCCTAGCAATCCCACAATaGTTTCCTTTATTTCTTGCC +
Preference number: 2 (lower is better)
Translates to: SQLNIASTSWVQGISCLSLAIPQ*FPLFLA
Trigger: GGCAAGAAATAAAGGAAATCATTGTGGGATTGCTAG...GCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
3UTR-3UTR TCA 90 bp GTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCTCCATCCAACATGGTaGAACTCCATCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: VISAQHSLNLLGSRNLVPLHPTW*NSISTK
Trigger: TTTAGTAGAGATGGAGTTTCACCATGTTGGATGGAG...AGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680931.1
3UTR-3UTR CCA 90 bp AGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTAGTAGGCTGGGCTCAGTaGCTCAAACTATATTTTCTA +
Preference number: 2 (lower is better)
Translates to: RMLLFSGCQESTSYMTVLVGWAQ*LKLYFL
Trigger: TAGAAAATATAGTTTGAGCCACTGAGCCCAGCCTAC...TAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000607427.2
3UTR-3UTR GCA 90 bp AGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTAAAAGTTCCTGCTGCCTaGTTAGATGCATCTACTAAT +
Preference number: 2 (lower is better)
Translates to: RMLLFSGCQESTSYMTVLKVPAA*LDASTN
Trigger: ATTAGTAGATGCATCTAAGCAGGCAGCAGGAACTTT...TAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR-3UTR GCA 90 bp AATATAAGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGACTCCTTTTCTCTGGGTaGCAGGAGAGCACCTCTTAC +
Preference number: 2 (lower is better)
Translates to: NISFTRHEGLHKEIKAQRLLFSG*QESTSY
Trigger: GTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAG...TCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACTTATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR-3UTR CCA 90 bp ATTCTGGTTGGCTCAGTTATTTGCCAAATAAAGGCCCTGGTCAAATTGTTGATGCTGGTCTTGAACTCCTaGGCTCAAGACGATCCTCCT +
Preference number: 2 (lower is better)
Translates to: ILVGSVICQIKALVKLLMLVLNS*AQDDPP
Trigger: AGGAGGATCGTCTTGAGCCCAGGAGTTCAAGACCAG...CATCAACAATTTGACCAGGGCCTTTATTTGGCAAATAACTGAGCCAACCAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR-3UTR CCA 90 bp AAATTTAAAGTTCCTGCTGCCTGCTTAGATGCATCTACTAATCTAGAGCAGTTGCTGGTCTTGAACTCCTaGGCTCAAGACGATCCTCCT +
Preference number: 2 (lower is better)
Translates to: KFKVPAACLDASTNLEQLLVLNS*AQDDPP
Trigger: AGGAGGATCGTCTTGAGCCCAGGAGTTCAAGACCAG...CAACTGCTCTAGATTAGTAGATGCATCTAAGCAGGCAGCAGGAACTTTAAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR-3UTR TCA 90 bp GTTATAAAAAGGAGAGATCCTCTAGATTTCTGGGTAAGAGGGAAAGCTAGCAATTCCTGGCCAACATGGTaGAACTCCATCCAACATGGT +
Preference number: 2 (lower is better)
Translates to: VIKRRDPLDFWVRGKASNSWPTW*NSIQHG
Trigger: ACCATGTTGGATGGAGTTTCACCATGTTGGCCAGGA...ATTGCTAGCTTTCCCTCTTACCCAGAAATCTAGAGGATCTCTCCTTTTTATAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680931.1
3UTR-3UTR GCA 90 bp AGTATTGGTTATTTTATTCTGGTTGGCTCAGTTATTTGCCAAATAAAGGCCCTGCCTGTCTTAGACATCTaGATAGCAGGGACCACAGGC +
Preference number: 2 (lower is better)
Translates to: SIGYFILVGSVICQIKALPVLDI*IAGTTG
Trigger: GCCTGTGGTCCCTGCTATGCAGATGTCTAAGACAGG...CAGGGCCTTTATTTGGCAAATAACTGAGCCAACCAGAATAAAATAACCAATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR-3UTR GCA 90 bp AATATAAGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGACAATTACAAGCTCACTaGATTCTCAACCTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: NISFTRHEGLHKEIKAQRQLQAH*ILNLLG
Trigger: GCCCAGGAGGTTGAGAATGCAGTGAGCTTGTAATTG...TCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACTTATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR-3UTR GCA 90 bp GTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTGTTCAAGGAATCTCGTaGCTCAAACTATATTTTCTA +
Preference number: 2 (lower is better)
Translates to: VISAQHSLNLLGSRNLVPVQGIS*LKLYFL
Trigger: TAGAAAATATAGTTTGAGGCACGAGATTCCTTGAAC...AGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681444.1
3UTR-3UTR GCA 90 bp AGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGAAACAGTAAAGTTCCTGCTGCCTaGTTAGATGCATCTACTAAT +
Preference number: 2 (lower is better)
Translates to: SFTRHEGLHKEIKAQRNSKVPAA*LDASTN
Trigger: ATTAGTAGATGCATCTAAGCAGGCAGCAGGAACTTT...ACTGTTTCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR-3UTR CCA 90 bp AGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGAAACAGTTTGGTTATTTTATTCTaGTTGGCTCAGTTATTTGCC +
Preference number: 2 (lower is better)
Translates to: SFTRHEGLHKEIKAQRNSLVILF*LAQLFA
Trigger: GGCAAATAACTGAGCCAACCAGAATAAAATAACCAA...ACTGTTTCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR TCA 72 bp GTCTTGCTCCGTTGCCGAGGCTGGAGTACAGTGGCGTaGTCTCGGCTCACTGCACCTCCACCTCCTGAGTTC +
Preference number: 3 (lower is better)
Translates to: VLLRCRGWSTVA*SRLTAPPPPEF
Trigger: GAACTCAGGAGGTGGAGGTGCAGTGAGCCGAGATCACGCCACTGTACTCCAGCCTCGGCAACGGAGCAAGAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679582.1
3UTR-3UTR CAA 90 bp TGGCGTGATCTCGGCTCACTGCACCTCCACCTCCTGAGTTCAAGCGATTCTCCTCTGCTTCTCAAGCAATaGGCATGGTGGCAAGCCCAG +
Preference number: 3 (lower is better)
Translates to: WRDLGSLHLHLLSSSDSPLLLKQ*AWWQAQ
Trigger: CTGGGCTTGCCACCATGCCAATTGCTTGAGAAGCAG...AGGAGAATCGCTTGAACTCAGGAGGTGGAGGTGCAGTGAGCCGAGATCACGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679582.1
3UTR-3UTR CAA 90 bp CAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCCTCGTTGATATGCCTGCCTaGGCCTCCCAAGTACTGGGA +
Preference number: 3 (lower is better)
Translates to: QLNIASTSWVQGISCLSLVDMPA*ASQVLG
Trigger: TCCCAGTACTTGGGAGGCCAAGGCAGGCATATCAAC...GAGGCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
3UTR-3UTR CAA 90 bp TCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCGTTGATATGCCTGCCTaGGCCTCCCAAGTACTGGGA +
Preference number: 3 (lower is better)
Translates to: SQLNIASTSWVQGISCLSVDMPA*ASQVLG
Trigger: TCCCAGTACTTGGGAGGCCAAGGCAGGCATATCAAC...GCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
3UTR-3UTR CAA 90 bp ATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGGTTGATATGCCTGCCTaGGCCTCCCAAGTACTGGGA +
Preference number: 3 (lower is better)
Translates to: ISAQHSLNLLGSRNLVPQVDMPA*ASQVLG
Trigger: TCCCAGTACTTGGGAGGCCAAGGCAGGCATATCAAC...CTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
3UTR-3UTR CAA 90 bp TCCCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCACATAGCCTCAACCTCTaGGGTTCAAGGAATCTCGTG +
Preference number: 3 (lower is better)
Translates to: SQVLWLLLGRTAGRRSESHSLNL*GSRNLV
Trigger: CACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATG...TGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR-3UTR CAA 90 bp CCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCTACGTTGATATGCCTGCCTaGGCCTCCCAAGTACTGGGA +
Preference number: 3 (lower is better)
Translates to: PFLWVPGEHLLHDSLMIYVDMPA*ASQVLG
Trigger: TCCCAGTACTTGGGAGGCCAAGGCAGGCATATCAAC...GTAGATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR-3UTR CAA 90 bp TCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCCATAGCCTCAACCTCTaGGGTTCAAGGAATCTCGTG +
Preference number: 3 (lower is better)
Translates to: SQLNIASTSWVQGISCLSHSLNL*GSRNLV
Trigger: CACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATG...GCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
3UTR-3UTR CAA 90 bp GAGTACAGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGCATAGCCTCAACCTCTaGGGTTCAAGGAATCTCGTG +
Preference number: 3 (lower is better)
Translates to: EYSGVISAQHSLNLLGSRHSLNL*GSRNLV
Trigger: CACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATG...CCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACTGTACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
3UTR-3UTR CAA 90 bp AAGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTCATAGCCTCAACCTCTaGGGTTCAAGGAATCTCGTG +
Preference number: 3 (lower is better)
Translates to: KDAPFLWVPGEHLLHDSLHSLNL*GSRNLV
Trigger: CACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATG...AAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR-3UTR CAA 90 bp GTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCATAGCCTCAACCTCTaGGGTTCAAGGAATCTCGTG +
Preference number: 3 (lower is better)
Translates to: VISAQHSLNLLGSRNLVPHSLNL*GSRNLV
Trigger: CACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATG...AGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
3UTR-3UTR CAA 90 bp CCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCTACCATAGCCTCAACCTCTaGGGTTCAAGGAATCTCGTG +
Preference number: 3 (lower is better)
Translates to: PFLWVPGEHLLHDSLMIYHSLNL*GSRNLV
Trigger: CACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATG...GTAGATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR-3UTR CAA 90 bp GATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGGGTTGGCTCAGTTATTaGCCAAATAAAGGCCCTGGT +
Preference number: 3 (lower is better)
Translates to: DAPFLWVPGEHLLHDSLMGWLSY*PNKGPG
Trigger: ACCAGGGCCTTTATTTGGCAAATAACTGAGCCAACC...CATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR-3UTR CAA 90 bp GGTAAGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTTTTCTTCCATCAAAGTaGCTAAACCCCATCACCAGA +
Preference number: 3 (lower is better)
Translates to: GKDAPFLWVPGEHLLHDSFLPSK*LNPITR
Trigger: TCTGGTGATGGGGTTTAGCAACTTTGATGGAAGAAA...ACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR-3UTR CAA 90 bp AGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTAACTACACGTGGCGTTTaGAATCCTCTTCTGTACAAA +
Preference number: 3 (lower is better)
Translates to: RMLLFSGCQESTSYMTVLTTRGV*NPLLYK
Trigger: TTTGTACAGAAGAGGATTCAAAACGCCACGTGTAGT...TAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR-3UTR CAA 90 bp AATATAAGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGATGTAATCTTAGCACTTaGGGAGGCTGGGGTGGGTGG +
Preference number: 3 (lower is better)
Translates to: NISFTRHEGLHKEIKAQRCNLST*GGWGGW
Trigger: CCACCCACCCCAGCCTCCCAAAGTGCTAAGATTACA...TCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACTTATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR TCA 72 bp GAGGTCAAGAGATCGAGATCATCCTGGCCAACATGGTaGAACTCCATCCAACATGGTGAAACTCCATCTCTA +
Preference number: 3 (lower is better)
Translates to: EVKRSRSSWPTW*NSIQHGETPSL
Trigger: TAGAGATGGAGTTTCACCATGTTGGATGGAGTTTCACCATGTTGGCCAGGATGATCTCGATCTCTTGACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680931.1
3UTR-3UTR CAA 90 bp AGTATTGGTTATTTTATTCTGGTTGGCTCAGTTATTTGCCAAATAAAGGCCCTGGTTGATATGCCTGCCTaGGCCTCCCAAGTACTGGGA +
Preference number: 3 (lower is better)
Translates to: SIGYFILVGSVICQIKALVDMPA*ASQVLG
Trigger: TCCCAGTACTTGGGAGGCCAAGGCAGGCATATCAAC...CAGGGCCTTTATTTGGCAAATAACTGAGCCAACCAGAATAAAATAACCAATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR-3UTR CAA 90 bp AGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGAAACAGTTTTCTTCCATCAAAGTaGCTAAACCCCATCACCAGA +
Preference number: 3 (lower is better)
Translates to: SFTRHEGLHKEIKAQRNSFLPSK*LNPITR
Trigger: TCTGGTGATGGGGTTTAGCAACTTTGATGGAAGAAA...ACTGTTTCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR-3UTR CAA 90 bp AGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGAAACAGTTGTTTAGATTCCTCTTaGTGTCCCTGTGCTTTTGGA +
Preference number: 3 (lower is better)
Translates to: SFTRHEGLHKEIKAQRNSCLDSS*CPCAFG
Trigger: TCCAAAAGCACAGGGACACAAAGAGGAATCTAAACA...ACTGTTTCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR-3UTR CAA 90 bp AATATAAGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGAACTACACGTGGCGTTTaGAATCCTCTTCTGTACAAA +
Preference number: 3 (lower is better)
Translates to: NISFTRHEGLHKEIKAQRTTRGV*NPLLYK
Trigger: TTTGTACAGAAGAGGATTCAAAACGCCACGTGTAGT...TCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACTTATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR-3UTR CAA 90 bp AATATAAGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGATGTTTAGATTCCTCTTaGTGTCCCTGTGCTTTTGGA +
Preference number: 3 (lower is better)
Translates to: NISFTRHEGLHKEIKAQRCLDSS*CPCAFG
Trigger: TCCAAAAGCACAGGGACACAAAGAGGAATCTAAACA...TCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACTTATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR-3UTR CAA 90 bp AAATTTAAAGTTCCTGCTGCCTGCTTAGATGCATCTACTAATCTAGAGCAGTTGACTACACGTGGCGTTTaGAATCCTCTTCTGTACAAA +
Preference number: 3 (lower is better)
Translates to: KFKVPAACLDASTNLEQLTTRGV*NPLLYK
Trigger: TTTGTACAGAAGAGGATTCAAAACGCCACGTGTAGT...CAACTGCTCTAGATTAGTAGATGCATCTAAGCAGGCAGCAGGAACTTTAAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR-3UTR CAA 90 bp AGTATTGGTTATTTTATTCTGGTTGGCTCAGTTATTTGCCAAATAAAGGCCCTGTTTCTTCCATCAAAGTaGCTAAACCCCATCACCAGA +
Preference number: 3 (lower is better)
Translates to: SIGYFILVGSVICQIKALFLPSK*LNPITR
Trigger: TCTGGTGATGGGGTTTAGCAACTTTGATGGAAGAAA...CAGGGCCTTTATTTGGCAAATAACTGAGCCAACCAGAATAAAATAACCAATACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR-3UTR CAA 90 bp AATATAAGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGAATGAGCAGTGGAGTATaGGTTATTTTATTCTGGTTG +
Preference number: 3 (lower is better)
Translates to: NISFTRHEGLHKEIKAQRMSSGV*VILFWL
Trigger: CAACCAGAATAAAATAACCAATACTCCACTGCTCAT...TCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACTTATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp TGGCGTGATCTCGGCTCACTGCACCTCCACCTCCTGAGTTCAAGCGATTCTCCTCCAGGTTCTGGGCACTaGGAGACACCAGCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: WRDLGSLHLHLLSSSDSPPGSGH*ETPAFL
Trigger: CAGGAAAGCTGGTGTCTCTCAGTGCCCAGAACCTGG...AGGAGAATCGCTTGAACTCAGGAGGTGGAGGTGCAGTGAGCCGAGATCACGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679582.1
CDS-3UTR TCA 90 bp CCAGGCTGCTCTTTAACTCCTGGCCTCAAGTTGATATGCCTGCCTTGGCCTCCCTGTCCAGGCTGGTCTTaGACTCCTGGGCTCAAGACG +
Preference number: 4 (lower is better)
Translates to: PGCSLTPGLKLICLPWPPCPGWS*TPGLKT
Trigger: CGTCTTGAGCCCAGGAGTTCAAGACCAGCCTGGACA...GGGAGGCCAAGGCAGGCATATCAACTTGAGGCCAGGAGTTAAAGAGCAGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp CCAGGCTGCTCTTTAACTCCTGGCCTCAAGTTGATATGCCTGCCTTGGCCTCCCAGGCAGAGGTTGCAGTaGGCTGAGATCGTGCCACCT +
Preference number: 4 (lower is better)
Translates to: PGCSLTPGLKLICLPWPPRQRLQ*AEIVPP
Trigger: AGGTGGCACGATCTCAGCTCACTGCAACCTCTGCCT...GGGAGGCCAAGGCAGGCATATCAACTTGAGGCCAGGAGTTAAAGAGCAGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483930.2
CDS-3UTR GCA 90 bp CCAGGCTGCTCTTTAACTCCTGGCCTCAAGTTGATATGCCTGCCTTGGCCTCCCTTTCAGCTTCAGCTGTaGTTCCAGGGCCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: PGCSLTPGLKLICLPWPPFQLQL*FQGPHS
Trigger: GCTGTGGGGGCCCTGGAAGCACAGCTGAAGCTGAAA...GGGAGGCCAAGGCAGGCATATCAACTTGAGGCCAGGAGTTAAAGAGCAGCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR GCA 90 bp TGGCGTGATCTCGGCTCACTGCACCTCCACCTCCTGAGTTCAAGCGATTCTCCTTTTCAGCTTCAGCTGTaGTTCCAGGGCCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: WRDLGSLHLHLLSSSDSPFQLQL*FQGPHS
Trigger: GCTGTGGGGGCCCTGGAAGCACAGCTGAAGCTGAAA...AGGAGAATCGCTTGAACTCAGGAGGTGGAGGTGCAGTGAGCCGAGATCACGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679582.1
CDS-3UTR CCA 90 bp TGGCGTGATCTCGGCTCACTGCACCTCCACCTCCTGAGTTCAAGCGATTCTCCTGAGGCTGGAGTACAGTaGCGTGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: WRDLGSLHLHLLSSSDSPEAGVQ*RDLGSL
Trigger: CAGTGAGCCGAGATCACGCCACTGTACTCCAGCCTC...AGGAGAATCGCTTGAACTCAGGAGGTGGAGGTGCAGTGAGCCGAGATCACGCCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679582.1
CDS-3UTR TCA 90 bp CCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCACCCCAGGTTCTGGGCACTaGGAGACACCAGCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: PGFMAASGENSRQKVRVTPGSGH*ETPAFL
Trigger: CAGGAAAGCTGGTGTCTCTCAGTGCCCAGAACCTGG...GGTGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp CCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCACCTGTCCAGGCTGGTCTTaGACTCCTGGGCTCAAGACG +
Preference number: 4 (lower is better)
Translates to: PGFMAASGENSRQKVRVTCPGWS*TPGLKT
Trigger: CGTCTTGAGCCCAGGAGTTCAAGACCAGCCTGGACA...GGTGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp TGGCGTGATCTCGGCTCACTGCACCTCCACCTCCTGAGTTCAAGCGATTCTCCTTGCACCTCCACCTCCTaGGTTCAAGCGATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: WRDLGSLHLHLLSSSDSPCTSTS*VQAILL
Trigger: CAGGAGAATCGCTTGAACTCAGGAGGTGGAGGTGCA...AGGAGAATCGCTTGAACTCAGGAGGTGGAGGTGCAGTGAGCCGAGATCACGCCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679582.1
CDS-3UTR GCA 90 bp CCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCACCTTTCAGCTTCAGCTGTaGTTCCAGGGCCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: PGFMAASGENSRQKVRVTFQLQL*FQGPHS
Trigger: GCTGTGGGGGCCCTGGAAGCACAGCTGAAGCTGAAA...GGTGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp TCCCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCACCAGGTTCTGGGCACTaGGAGACACCAGCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: SQVLWLLLGRTAGRRSESPGSGH*ETPAFL
Trigger: CAGGAAAGCTGGTGTCTCTCAGTGCCCAGAACCTGG...TGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp CAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCCTCCCAGGTTCTGGGCACTaGGAGACACCAGCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: QLNIASTSWVQGISCLSLPGSGH*ETPAFL
Trigger: CAGGAAAGCTGGTGTCTCTCAGTGCCCAGAACCTGG...GAGGCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR TCA 90 bp TGGCGTGATCTCGGCTCACTGCACCTCCACCTCCTGAGTTCAAGCGATTCTCCTGGGATAGGAAGCGTCTaGGTCGATGCCCTTGTTATC +
Preference number: 4 (lower is better)
Translates to: WRDLGSLHLHLLSSSDSPGIGSV*VDALVI
Trigger: GATAACAAGGGCATCGACTCAGACGCTTCCTATCCC...AGGAGAATCGCTTGAACTCAGGAGGTGGAGGTGCAGTGAGCCGAGATCACGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679582.1
CDS-3UTR TCA 90 bp CCAGGCTGCTCTTTAACTCCTGGCCTCAAGTTGATATGCCTGCCTTGGCCTCCCGGGATAGGAAGCGTCTaGGTCGATGCCCTTGTTATC +
Preference number: 4 (lower is better)
Translates to: PGCSLTPGLKLICLPWPPGIGSV*VDALVI
Trigger: GATAACAAGGGCATCGACTCAGACGCTTCCTATCCC...GGGAGGCCAAGGCAGGCATATCAACTTGAGGCCAGGAGTTAAAGAGCAGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR TCA 90 bp TCCCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCATGTCCAGGCTGGTCTTaGACTCCTGGGCTCAAGACG +
Preference number: 4 (lower is better)
Translates to: SQVLWLLLGRTAGRRSESCPGWS*TPGLKT
Trigger: CGTCTTGAGCCCAGGAGTTCAAGACCAGCCTGGACA...TGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp CCAGGCTGCTCTTTAACTCCTGGCCTCAAGTTGATATGCCTGCCTTGGCCTCCCGAAGTTGCAGTGAACTaGGATGGTGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: PGCSLTPGLKLICLPWPPEVAVN*DGATAL
Trigger: GAGTGCAGTGGCACCATCTCAGTTCACTGCAACTTC...GGGAGGCCAAGGCAGGCATATCAACTTGAGGCCAGGAGTTAAAGAGCAGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR GCA 90 bp TGGCGTGATCTCGGCTCACTGCACCTCCACCTCCTGAGTTCAAGCGATTCTCCTATGCAACTGTGCCACTaGAGAGGAGCACACCAAGAG +
Preference number: 4 (lower is better)
Translates to: WRDLGSLHLHLLSSSDSPMQLCH*RGAHQE
Trigger: CTCTTGGTGTGCTCCTCTGCAGTGGCACAGTTGCAT...AGGAGAATCGCTTGAACTCAGGAGGTGGAGGTGCAGTGAGCCGAGATCACGCCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679582.1
CDS-3UTR GCA 90 bp TCCCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCATTTCAGCTTCAGCTGTaGTTCCAGGGCCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: SQVLWLLLGRTAGRRSESFQLQL*FQGPHS
Trigger: GCTGTGGGGGCCCTGGAAGCACAGCTGAAGCTGAAA...TGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR GCA 90 bp CCAGGCTGCTCTTTAACTCCTGGCCTCAAGTTGATATGCCTGCCTTGGCCTCCCTCGGGAGGCAGAAGTTaGAGTGAACTGAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: PGCSLTPGLKLICLPWPPSGGRS*SELRWC
Trigger: GCACCATCTCAGTTCACTGCAACTTCTGCCTCCCGA...GGGAGGCCAAGGCAGGCATATCAACTTGAGGCCAGGAGTTAAAGAGCAGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp CCAGGCTGCTCTTTAACTCCTGGCCTCAAGTTGATATGCCTGCCTTGGCCTCCCTTCTCTGCCACTGGCTaGGAACTCTCAGGGAACTCA +
Preference number: 4 (lower is better)
Translates to: PGCSLTPGLKLICLPWPPFSATG*ELSGNS
Trigger: TGAGTTCCCTGAGAGTTCCCAGCCAGTGGCAGAGAA...GGGAGGCCAAGGCAGGCATATCAACTTGAGGCCAGGAGTTAAAGAGCAGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR CCA 90 bp TGGCGTGATCTCGGCTCACTGCACCTCCACCTCCTGAGTTCAAGCGATTCTCCTTTCTCTGCCACTGGCTaGGAACTCTCAGGGAACTCA +
Preference number: 4 (lower is better)
Translates to: WRDLGSLHLHLLSSSDSPFSATG*ELSGNS
Trigger: TGAGTTCCCTGAGAGTTCCCAGCCAGTGGCAGAGAA...AGGAGAATCGCTTGAACTCAGGAGGTGGAGGTGCAGTGAGCCGAGATCACGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679582.1
CDS-3UTR GCA 90 bp CCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCACCTCGGGAGGCAGAAGTTaGAGTGAACTGAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: PGFMAASGENSRQKVRVTSGGRS*SELRWC
Trigger: GCACCATCTCAGTTCACTGCAACTTCTGCCTCCCGA...GGTGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR GCA 90 bp CCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCACCCTCCTTTTCTCTGGGTaGCAGGAGAGCACCTCTTAC +
Preference number: 4 (lower is better)
Translates to: PGFMAASGENSRQKVRVTLLFSG*QESTSY
Trigger: GTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAG...GGTGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp CCAGGCTGCTCTTTAACTCCTGGCCTCAAGTTGATATGCCTGCCTTGGCCTCCCCAGGCTGGAGTACAGTaGTGTGATCTCAGCTCAACA +
Preference number: 4 (lower is better)
Translates to: PGCSLTPGLKLICLPWPPQAGVQ*CDLSST
Trigger: TGTTGAGCTGAGATCACACCACTGTACTCCAGCCTG...GGGAGGCCAAGGCAGGCATATCAACTTGAGGCCAGGAGTTAAAGAGCAGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR CCA 90 bp CCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCACCGTAATCTTAGCACTTTaGGAGGCTGGGGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: PGFMAASGENSRQKVRVTVILAL*EAGVGG
Trigger: TCCACCCACCCCAGCCTCCCAAAGTGCTAAGATTAC...GGTGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp AGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTACCAGGTTCTGGGCACTaGGAGACACCAGCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: RMLLFSGCQESTSYMTVLPGSGH*ETPAFL
Trigger: CAGGAAAGCTGGTGTCTCTCAGTGCCCAGAACCTGG...TAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp GTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCCAGGTTCTGGGCACTaGGAGACACCAGCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: VISAQHSLNLLGSRNLVPPGSGH*ETPAFL
Trigger: CAGGAAAGCTGGTGTCTCTCAGTGCCCAGAACCTGG...AGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR TCA 90 bp CAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCCTCGGGATAGGAAGCGTCTaGGTCGATGCCCTTGTTATC +
Preference number: 4 (lower is better)
Translates to: QLNIASTSWVQGISCLSLGIGSV*VDALVI
Trigger: GATAACAAGGGCATCGACTCAGACGCTTCCTATCCC...GAGGCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR TCA 90 bp CCAGGCTGCTCTTTAACTCCTGGCCTCAAGTTGATATGCCTGCCTTGGCCTCCCAGGAAGAAAGAAGGATaGCGCGCATCTACACCAACA +
Preference number: 4 (lower is better)
Translates to: PGCSLTPGLKLICLPWPPRKKEG*RASTPT
Trigger: TGTTGGTGTAGATGCGCGTCATCCTTCTTTCTTCCT...GGGAGGCCAAGGCAGGCATATCAACTTGAGGCCAGGAGTTAAAGAGCAGCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR TCA 90 bp AAGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTTGTCCAGGCTGGTCTTaGACTCCTGGGCTCAAGACG +
Preference number: 4 (lower is better)
Translates to: KDAPFLWVPGEHLLHDSLCPGWS*TPGLKT
Trigger: CGTCTTGAGCCCAGGAGTTCAAGACCAGCCTGGACA...AAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp CAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCCTCGAAGTTGCAGTGAACTaGGATGGTGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: QLNIASTSWVQGISCLSLEVAVN*DGATAL
Trigger: GAGTGCAGTGGCACCATCTCAGTTCACTGCAACTTC...GAGGCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR GCA 90 bp CAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCCTCATGCAACTGTGCCACTaGAGAGGAGCACACCAAGAG +
Preference number: 4 (lower is better)
Translates to: QLNIASTSWVQGISCLSLMQLCH*RGAHQE
Trigger: CTCTTGGTGTGCTCCTCTGCAGTGGCACAGTTGCAT...GAGGCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR GCA 90 bp TGGCGTGATCTCGGCTCACTGCACCTCCACCTCCTGAGTTCAAGCGATTCTCCTATCTTTATGCAACTGTaGCACTGCAGAGGAGCACAC +
Preference number: 4 (lower is better)
Translates to: WRDLGSLHLHLLSSSDSPIFMQL*HCRGAH
Trigger: GTGTGCTCCTCTGCAGTGGCACAGTTGCATAAAGAT...AGGAGAATCGCTTGAACTCAGGAGGTGGAGGTGCAGTGAGCCGAGATCACGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679582.1
CDS-3UTR GCA 90 bp TGGCGTGATCTCGGCTCACTGCACCTCCACCTCCTGAGTTCAAGCGATTCTCCTAGGGTAGGATCTTTATaGAACTGTGCCACTGCAGAG +
Preference number: 4 (lower is better)
Translates to: WRDLGSLHLHLLSSSDSPRVGSL*NCATAE
Trigger: CTCTGCAGTGGCACAGTTGCATAAAGATCCTACCCT...AGGAGAATCGCTTGAACTCAGGAGGTGGAGGTGCAGTGAGCCGAGATCACGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679582.1
CDS-3UTR GCA 90 bp CCAGGCTGCTCTTTAACTCCTGGCCTCAAGTTGATATGCCTGCCTTGGCCTCCCCCCAGATCGTATGAGTaGATTCCCATTGAATGCTCC +
Preference number: 4 (lower is better)
Translates to: PGCSLTPGLKLICLPWPPPRSYE*IPIECS
Trigger: GGAGCATTCAATGGGAATGCACTCATACGATCTGGG...GGGAGGCCAAGGCAGGCATATCAACTTGAGGCCAGGAGTTAAAGAGCAGCCTGG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR GCA 90 bp TGGCGTGATCTCGGCTCACTGCACCTCCACCTCCTGAGTTCAAGCGATTCTCCTCCCAGATCGTATGAGTaGATTCCCATTGAATGCTCC +
Preference number: 4 (lower is better)
Translates to: WRDLGSLHLHLLSSSDSPPRSYE*IPIECS
Trigger: GGAGCATTCAATGGGAATGCACTCATACGATCTGGG...AGGAGAATCGCTTGAACTCAGGAGGTGGAGGTGCAGTGAGCCGAGATCACGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679582.1
CDS-3UTR GCA 90 bp AGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATTTCAGCTTCAGCTGTaGTTCCAGGGCCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: RMLLFSGCQESTSYMTVLFQLQL*FQGPHS
Trigger: GCTGTGGGGGCCCTGGAAGCACAGCTGAAGCTGAAA...TAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR GCA 90 bp AAGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTTTTCAGCTTCAGCTGTaGTTCCAGGGCCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: KDAPFLWVPGEHLLHDSLFQLQL*FQGPHS
Trigger: GCTGTGGGGGCCCTGGAAGCACAGCTGAAGCTGAAA...AAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR GCA 90 bp ATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGTTTCAGCTTCAGCTGTaGTTCCAGGGCCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: ISAQHSLNLLGSRNLVPQFQLQL*FQGPHS
Trigger: GCTGTGGGGGCCCTGGAAGCACAGCTGAAGCTGAAA...CTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR GCA 90 bp CAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCCTCCCTGTCTTAGACATCTaGATAGCAGGGACCACAGGC +
Preference number: 4 (lower is better)
Translates to: QLNIASTSWVQGISCLSLPVLDI*IAGTTG
Trigger: GCCTGTGGTCCCTGCTATGCAGATGTCTAAGACAGG...GAGGCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR GCA 90 bp CAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCCTCTCGGGAGGCAGAAGTTaGAGTGAACTGAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: QLNIASTSWVQGISCLSLSGGRS*SELRWC
Trigger: GCACCATCTCAGTTCACTGCAACTTCTGCCTCCCGA...GAGGCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR GCA 90 bp CAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCCTCCTCCTTTTCTCTGGGTaGCAGGAGAGCACCTCTTAC +
Preference number: 4 (lower is better)
Translates to: QLNIASTSWVQGISCLSLLLFSG*QESTSY
Trigger: GTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAG...GAGGCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp CCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCACCGTCATGTCTCCCAGGTaGTTCATGCCCAGATCGTAT +
Preference number: 4 (lower is better)
Translates to: PGFMAASGENSRQKVRVTVMSPR*FMPRSY
Trigger: ATACGATCTGGGCATGAACCACCTGGGAGACATGAC...GGTGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000680664.1
CDS-3UTR CCA 90 bp TCCCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCATTCTCTGCCACTGGCTaGGAACTCTCAGGGAACTCA +
Preference number: 4 (lower is better)
Translates to: SQVLWLLLGRTAGRRSESFSATG*ELSGNS
Trigger: TGAGTTCCCTGAGAGTTCCCAGCCAGTGGCAGAGAA...TGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000680664.1
CDS-3UTR CCA 90 bp CCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCACCCAGGCTGGAGTACAGTaGTGTGATCTCAGCTCAACA +
Preference number: 4 (lower is better)
Translates to: PGFMAASGENSRQKVRVTQAGVQ*CDLSST
Trigger: TGTTGAGCTGAGATCACACCACTGTACTCCAGCCTG...GGTGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp TCCCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCACTGGTCTTGAACTCCTaGGCTCAAGACGATCCTCCT +
Preference number: 4 (lower is better)
Translates to: SQVLWLLLGRTAGRRSESLVLNS*AQDDPP
Trigger: AGGAGGATCGTCTTGAGCCCAGGAGTTCAAGACCAG...TGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp CCAGGCTGCTCTTTAACTCCTGGCCTCAAGTTGATATGCCTGCCTTGGCCTCCCAGTTTGAGACCAGCCTaGCTAATGTGGCAAAACCCT +
Preference number: 4 (lower is better)
Translates to: PGCSLTPGLKLICLPWPPSLRPA*LMWQNP
Trigger: AGGGTTTTGCCACATTAGCCAGGCTGGTCTCAAACT...GGGAGGCCAAGGCAGGCATATCAACTTGAGGCCAGGAGTTAAAGAGCAGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp TGGCGTGATCTCGGCTCACTGCACCTCCACCTCCTGAGTTCAAGCGATTCTCCTGATTCTTTTCCCAGATaGGACGTCGTACTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: WRDLGSLHLHLLSSSDSPDSFPR*DVVLLL
Trigger: AAGAAGCAGTACGACGTCTCATCTGGGAAAAGAATC...AGGAGAATCGCTTGAACTCAGGAGGTGGAGGTGCAGTGAGCCGAGATCACGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679582.1
CDS-3UTR TCA 90 bp AGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCCCAGGTTCTGGGCACTaGGAGACACCAGCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: SGVISAQHSLNLLGSRNLPGSGH*ETPAFL
Trigger: CAGGAAAGCTGGTGTCTCTCAGTGCCCAGAACCTGG...GAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR TCA 90 bp TGGCGTGATCTCGGCTCACTGCACCTCCACCTCCTGAGTTCAAGCGATTCTCCTTGCCCTTGTTATCAATaGTGTACTGGAAAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: WRDLGSLHLHLLSSSDSPCPCYQ*CTGKPL
Trigger: CAACGGCTTTCCAGTACATCATTGATAACAAGGGCA...AGGAGAATCGCTTGAACTCAGGAGGTGGAGGTGCAGTGAGCCGAGATCACGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679582.1
CDS-3UTR TCA 90 bp TCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCGGGATAGGAAGCGTCTaGGTCGATGCCCTTGTTATC +
Preference number: 4 (lower is better)
Translates to: SQLNIASTSWVQGISCLSGIGSV*VDALVI
Trigger: GATAACAAGGGCATCGACTCAGACGCTTCCTATCCC...GCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR TCA 90 bp TCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCCCTCCTGGGCTCTTGTaGTCCTCCTGTCTTAGACAT +
Preference number: 4 (lower is better)
Translates to: SQLNIASTSWVQGISCLSPPGLL*SSCLRH
Trigger: ATGTCTAAGACAGGAGGATCACAAGAGCCCAGGAGG...GCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp CAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCCTCTCCTGGCCAACATGGTaGAACTCCATCCAACATGGT +
Preference number: 4 (lower is better)
Translates to: QLNIASTSWVQGISCLSLSWPTW*NSIQHG
Trigger: ACCATGTTGGATGGAGTTTCACCATGTTGGCCAGGA...GAGGCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680931.1
CDS-3UTR GCA 90 bp CCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCACCGATAGAACCAGCAGTTaGTCCCACAGTAAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: PGFMAASGENSRQKVRVTDRTSS*SHSKSP
Trigger: AGGACTCTTACTGTGGGAGCAACTGCTGGTTCTATC...GGTGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR GCA 90 bp TCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCATGCAACTGTGCCACTaGAGAGGAGCACACCAAGAG +
Preference number: 4 (lower is better)
Translates to: SQLNIASTSWVQGISCLSMQLCH*RGAHQE
Trigger: CTCTTGGTGTGCTCCTCTGCAGTGGCACAGTTGCAT...GCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR GCA 90 bp GGTAAGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTATGCAACTGTGCCACTaGAGAGGAGCACACCAAGAG +
Preference number: 4 (lower is better)
Translates to: GKDAPFLWVPGEHLLHDSMQLCH*RGAHQE
Trigger: CTCTTGGTGTGCTCCTCTGCAGTGGCACAGTTGCAT...ACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
CDS-3UTR GCA 90 bp CCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCACCAGGGTAGGATCTTTATaGAACTGTGCCACTGCAGAG +
Preference number: 4 (lower is better)
Translates to: PGFMAASGENSRQKVRVTRVGSL*NCATAE
Trigger: CTCTGCAGTGGCACAGTTGCATAAAGATCCTACCCT...GGTGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
CDS-3UTR GCA 90 bp CCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCACCCCCAGATCGTATGAGTaGATTCCCATTGAATGCTCC +
Preference number: 4 (lower is better)
Translates to: PGFMAASGENSRQKVRVTPRSYE*IPIECS
Trigger: GGAGCATTCAATGGGAATGCACTCATACGATCTGGG...GGTGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR GCA 90 bp CCAGGCTGCTCTTTAACTCCTGGCCTCAAGTTGATATGCCTGCCTTGGCCTCCCTATGTGATATTTCTCTaGCACTGGCTGGGAACTCTC +
Preference number: 4 (lower is better)
Translates to: PGCSLTPGLKLICLPWPPYVIFL*HWLGTL
Trigger: GAGAGTTCCCAGCCAGTGGCAGAGAAATATCACATA...GGGAGGCCAAGGCAGGCATATCAACTTGAGGCCAGGAGTTAAAGAGCAGCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR GCA 90 bp TGGCGTGATCTCGGCTCACTGCACCTCCACCTCCTGAGTTCAAGCGATTCTCCTTATGTGATATTTCTCTaGCACTGGCTGGGAACTCTC +
Preference number: 4 (lower is better)
Translates to: WRDLGSLHLHLLSSSDSPYVIFL*HWLGTL
Trigger: GAGAGTTCCCAGCCAGTGGCAGAGAAATATCACATA...AGGAGAATCGCTTGAACTCAGGAGGTGGAGGTGCAGTGAGCCGAGATCACGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679582.1
CDS-3UTR GCA 90 bp CCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCTACTTTCAGCTTCAGCTGTaGTTCCAGGGCCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: PFLWVPGEHLLHDSLMIYFQLQL*FQGPHS
Trigger: GCTGTGGGGGCCCTGGAAGCACAGCTGAAGCTGAAA...GTAGATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR GCA 90 bp GGTAAGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTCCTTTTCTCTGGGTaGCAGGAGAGCACCTCTTAC +
Preference number: 4 (lower is better)
Translates to: GKDAPFLWVPGEHLLHDSLLFSG*QESTSY
Trigger: GTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAG...ACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR GCA 90 bp GTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTGGTGAGCTGAGATCATaGCACTGCACTCTAGCCTGG +
Preference number: 4 (lower is better)
Translates to: VISAQHSLNLLGSRNLVPGELRS*HCTLAW
Trigger: CCAGGCTAGAGTGCAGTGGCATGATCTCAGCTCACC...AGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680931.1
CDS-3UTR GCA 90 bp TGGCGTGATCTCGGCTCACTGCACCTCCACCTCCTGAGTTCAAGCGATTCTCCTGCAGCACAAAAAGTTTaGTTAAGACGCACCATGGCT +
Preference number: 4 (lower is better)
Translates to: WRDLGSLHLHLLSSSDSPAAQKV*LRRTMA
Trigger: AGCCATGGTGCGTCTTAAGCAAACTTTTTGTGCTGC...AGGAGAATCGCTTGAACTCAGGAGGTGGAGGTGCAGTGAGCCGAGATCACGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679582.1
CDS-3UTR CCA 90 bp CCAGGCTGCTCTTTAACTCCTGGCCTCAAGTTGATATGCCTGCCTTGGCCTCCCGATCCTCTAGATTTCTaGGTAAGAGGGAAAGCTAGC +
Preference number: 4 (lower is better)
Translates to: PGCSLTPGLKLICLPWPPDPLDF*VRGKAS
Trigger: GCTAGCTTTCCCTCTTACCCAGAAATCTAGAGGATC...GGGAGGCCAAGGCAGGCATATCAACTTGAGGCCAGGAGTTAAAGAGCAGCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR CCA 90 bp TCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCCTGGTCTTGAACTCCTaGGCTCAAGACGATCCTCCT +
Preference number: 4 (lower is better)
Translates to: SQLNIASTSWVQGISCLSLVLNS*AQDDPP
Trigger: AGGAGGATCGTCTTGAGCCCAGGAGTTCAAGACCAG...GCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp AGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCTTGGGGAGACCGAGGTaGGCAGATCACGAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: SGVISAQHSLNLLGSRNLLGRPR*ADHEVK
Trigger: CTTGACCTCGTGATCTGCCCACCTCGGTCTCCCCAA...GAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680931.1
CDS-3UTR TCA 90 bp TGGCGTGATCTCGGCTCACTGCACCTCCACCTCCTGAGTTCAAGCGATTCTCCTGAATGCTCCAGGTTGTaGAGCATCACAAACTTTAGA +
Preference number: 4 (lower is better)
Translates to: WRDLGSLHLHLLSSSDSPECSRL*SITNFR
Trigger: TCTAAAGTTTGTGATGCTTCACAACCTGGAGCATTC...AGGAGAATCGCTTGAACTCAGGAGGTGGAGGTGCAGTGAGCCGAGATCACGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679582.1
CDS-3UTR TCA 90 bp TGGCGTGATCTCGGCTCACTGCACCTCCACCTCCTGAGTTCAAGCGATTCTCCTGGTTTGACTTATATGTaGTATTTCTCTGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: WRDLGSLHLHLLSSSDSPGLTYM*YFSATG
Trigger: GCCAGTGGCAGAGAAATATCACATATAAGTCAAACC...AGGAGAATCGCTTGAACTCAGGAGGTGGAGGTGCAGTGAGCCGAGATCACGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679582.1
CDS-3UTR TCA 90 bp CCAGGCTGCTCTTTAACTCCTGGCCTCAAGTTGATATGCCTGCCTTGGCCTCCCTCCATATTTTTCAGTTaGGCAATCCACCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: PGCSLTPGLKLICLPWPPSIFFS*AIHQVL
Trigger: CAGAACCTGGTGGATTGCTCAACTGAAAAATATGGA...GGGAGGCCAAGGCAGGCATATCAACTTGAGGCCAGGAGTTAAAGAGCAGCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR TCA 90 bp TGGCGTGATCTCGGCTCACTGCACCTCCACCTCCTGAGTTCAAGCGATTCTCCTTCCATATTTTTCAGTTaGGCAATCCACCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: WRDLGSLHLHLLSSSDSPSIFFS*AIHQVL
Trigger: CAGAACCTGGTGGATTGCTCAACTGAAAAATATGGA...AGGAGAATCGCTTGAACTCAGGAGGTGGAGGTGCAGTGAGCCGAGATCACGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679582.1
CDS-3UTR TCA 90 bp CCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCACCTGCCCTTGTTATCAATaGTGTACTGGAAAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: PGFMAASGENSRQKVRVTCPCYQ*CTGKPL
Trigger: CAACGGCTTTCCAGTACATCATTGATAACAAGGGCA...GGTGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp GAGTACAGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGGGGATAGGAAGCGTCTaGGTCGATGCCCTTGTTATC +
Preference number: 4 (lower is better)
Translates to: EYSGVISAQHSLNLLGSRGIGSV*VDALVI
Trigger: GATAACAAGGGCATCGACTCAGACGCTTCCTATCCC...CCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACTGTACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR TCA 90 bp GTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTGGGATAGGAAGCGTCTaGGTCGATGCCCTTGTTATC +
Preference number: 4 (lower is better)
Translates to: VISAQHSLNLLGSRNLVPGIGSV*VDALVI
Trigger: GATAACAAGGGCATCGACTCAGACGCTTCCTATCCC...AGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR TCA 90 bp GATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGGGGATAGGAAGCGTCTaGGTCGATGCCCTTGTTATC +
Preference number: 4 (lower is better)
Translates to: DAPFLWVPGEHLLHDSLMGIGSV*VDALVI
Trigger: GATAACAAGGGCATCGACTCAGACGCTTCCTATCCC...CATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp CCAGGCTGCTCTTTAACTCCTGGCCTCAAGTTGATATGCCTGCCTTGGCCTCCCAAGTTCAGTGTACTTTaGACATGTGGCAGCACGATA +
Preference number: 4 (lower is better)
Translates to: PGCSLTPGLKLICLPWPPKFSVL*TCGSTI
Trigger: TATCGTGCTGCCACATGTTCAAAGTACACTGAACTT...GGGAGGCCAAGGCAGGCATATCAACTTGAGGCCAGGAGTTAAAGAGCAGCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR TCA 90 bp GAGTACAGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAGGCAGAAGTTGCAGTaGACTGAGATGGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: EYSGVISAQHSLNLLGSRRQKLQ*TEMVPL
Trigger: CAGTGGCACCATCTCAGTTCACTGCAACTTCTGCCT...CCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACTGTACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR GCA 90 bp GATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATGCAACTGTGCCACTaGAGAGGAGCACACCAAGAG +
Preference number: 4 (lower is better)
Translates to: DAPFLWVPGEHLLHDSLMMQLCH*RGAHQE
Trigger: CTCTTGGTGTGCTCCTCTGCAGTGGCACAGTTGCAT...CATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
CDS-3UTR GCA 90 bp TCCCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCAATCTTTATGCAACTGTaGCACTGCAGAGGAGCACAC +
Preference number: 4 (lower is better)
Translates to: SQVLWLLLGRTAGRRSESIFMQL*HCRGAH
Trigger: GTGTGCTCCTCTGCAGTGGCACAGTTGCATAAAGAT...TGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
CDS-3UTR GCA 90 bp CAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCCTCCCCAGATCGTATGAGTaGATTCCCATTGAATGCTCC +
Preference number: 4 (lower is better)
Translates to: QLNIASTSWVQGISCLSLPRSYE*IPIECS
Trigger: GGAGCATTCAATGGGAATGCACTCATACGATCTGGG...GAGGCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR GCA 90 bp TCCCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCACAATTACAAGCTCACTaGATTCTCAACCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SQVLWLLLGRTAGRRSESQLQAH*ILNLLG
Trigger: GCCCAGGAGGTTGAGAATGCAGTGAGCTTGTAATTG...TGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR GCA 90 bp CCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCACCGTTGGCTCAGTTATTTaGCAAATAAAGGCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: PGFMAASGENSRQKVRVTVGSVI*QIKALV
Trigger: GACCAGGGCCTTTATTTGGCAAATAACTGAGCCAAC...GGTGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR GCA 90 bp ATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGTCGGGAGGCAGAAGTTaGAGTGAACTGAGATGGTGC +
Preference number: 4 (lower is better)
Translates to: ISAQHSLNLLGSRNLVPQSGGRS*SELRWC
Trigger: GCACCATCTCAGTTCACTGCAACTTCTGCCTCCCGA...CTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR GCA 90 bp AAGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTCCCAGGTTTTATGGCTaGTTCTGGGGAGAACAGCAG +
Preference number: 4 (lower is better)
Translates to: KDAPFLWVPGEHLLHDSLPRFYG*FWGEQQ
Trigger: CTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGGG...AAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR GCA 90 bp GAGTACAGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGCCCAGGTTTTATGGCTaGTTCTGGGGAGAACAGCAG +
Preference number: 4 (lower is better)
Translates to: EYSGVISAQHSLNLLGSRPRFYG*FWGEQQ
Trigger: CTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGGG...CCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACTGTACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR GCA 90 bp GATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGCTCCTTTTCTCTGGGTaGCAGGAGAGCACCTCTTAC +
Preference number: 4 (lower is better)
Translates to: DAPFLWVPGEHLLHDSLMLLFSG*QESTSY
Trigger: GTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAG...CATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR GCA 90 bp GCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCCTCCTTTTCTCTGGGTaGCAGGAGAGCACCTCTTAC +
Preference number: 4 (lower is better)
Translates to: APFLWVPGEHLLHDSLMILLFSG*QESTSY
Trigger: GTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAG...GATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp TCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCGTCATGTCTCCCAGGTaGTTCATGCCCAGATCGTAT +
Preference number: 4 (lower is better)
Translates to: SQLNIASTSWVQGISCLSVMSPR*FMPRSY
Trigger: ATACGATCTGGGCATGAACCACCTGGGAGACATGAC...GCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR CCA 90 bp AGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATTCTCTGCCACTGGCTaGGAACTCTCAGGGAACTCA +
Preference number: 4 (lower is better)
Translates to: RMLLFSGCQESTSYMTVLFSATG*ELSGNS
Trigger: TGAGTTCCCTGAGAGTTCCCAGCCAGTGGCAGAGAA...TAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000680664.1
CDS-3UTR CCA 90 bp CCAGGCTGCTCTTTAACTCCTGGCCTCAAGTTGATATGCCTGCCTTGGCCTCCCGACATTTCTGATCCATaGCTTTGTAGGGATAGGAAG +
Preference number: 4 (lower is better)
Translates to: PGCSLTPGLKLICLPWPPDISDP*LCRDRK
Trigger: CTTCCTATCCCTACAAAGCCATGGATCAGAAATGTC...GGGAGGCCAAGGCAGGCATATCAACTTGAGGCCAGGAGTTAAAGAGCAGCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR CCA 90 bp CAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCCTCACACTGGGCCTTTATTaGCCACAGCTTCTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: QLNIASTSWVQGISCLSLTLGLY*PQLLSG
Trigger: TCCTGAAAGAAGCTGTGGCCAATAAAGGCCCAGTGT...GAGGCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR CCA 90 bp GGTAAGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTTTGATATGCCTGCCTTaGCCTCCCAAGTACTGGGAT +
Preference number: 4 (lower is better)
Translates to: GKDAPFLWVPGEHLLHDSLICLP*PPKYWD
Trigger: ATCCCAGTACTTGGGAGGCCAAGGCAGGCATATCAA...ACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCTTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp TCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCTTGATATGCCTGCCTTaGCCTCCCAAGTACTGGGAT +
Preference number: 4 (lower is better)
Translates to: SQLNIASTSWVQGISCLSLICLP*PPKYWD
Trigger: ATCCCAGTACTTGGGAGGCCAAGGCAGGCATATCAA...GCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR CCA 90 bp TCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCCAGGCTGGAGTACAGTaGTGTGATCTCAGCTCAACA +
Preference number: 4 (lower is better)
Translates to: SQLNIASTSWVQGISCLSQAGVQ*CDLSST
Trigger: TGTTGAGCTGAGATCACACCACTGTACTCCAGCCTG...GCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR CCA 90 bp GTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCTGGTCTTGAACTCCTaGGCTCAAGACGATCCTCCT +
Preference number: 4 (lower is better)
Translates to: VISAQHSLNLLGSRNLVPLVLNS*AQDDPP
Trigger: AGGAGGATCGTCTTGAGCCCAGGAGTTCAAGACCAG...AGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp TCCCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCAAGTTTGAGACCAGCCTaGCTAATGTGGCAAAACCCT +
Preference number: 4 (lower is better)
Translates to: SQVLWLLLGRTAGRRSESSLRPA*LMWQNP
Trigger: AGGGTTTTGCCACATTAGCCAGGCTGGTCTCAAACT...TGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp AGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTAGTAATCTTAGCACTTTaGGAGGCTGGGGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: RMLLFSGCQESTSYMTVLVILAL*EAGVGG
Trigger: TCCACCCACCCCAGCCTCCCAAAGTGCTAAGATTAC...TAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp CCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCACCCTAGTCATTTCCCTATaGTCTTGGGGACAAAGTGGA +
Preference number: 4 (lower is better)
Translates to: PGFMAASGENSRQKVRVTLVISL*SWGQSG
Trigger: TCCACTTTGTCCCCAAGACCATAGGGAAATGACTAG...GGTGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680288.1
CDS-3UTR CCA 90 bp GCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCCCCATGTCTCCCAGGTaGTTCATGCCCAGATCGTAT +
Preference number: 4 (lower is better)
Translates to: APFLWVPGEHLLHDSLMIPMSPR*FMPRSY
Trigger: ATACGATCTGGGCATGAACCACCTGGGAGACATGGG...GATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680288.1
CDS-3UTR TCA 90 bp CAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCCTCGATTCTTTTCCCAGATaGGACGTCGTACTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: QLNIASTSWVQGISCLSLDSFPR*DVVLLL
Trigger: AAGAAGCAGTACGACGTCTCATCTGGGAAAAGAATC...GAGGCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR TCA 90 bp CCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCACCGGTTTGACTTATATGTaGTATTTCTCTGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: PGFMAASGENSRQKVRVTGLTYM*YFSATG
Trigger: GCCAGTGGCAGAGAAATATCACATATAAGTCAAACC...GGTGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000680664.1
CDS-3UTR TCA 90 bp AGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGAAACAGTCCAGGTTCTGGGCACTaGGAGACACCAGCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: SFTRHEGLHKEIKAQRNSPGSGH*ETPAFL
Trigger: CAGGAAAGCTGGTGTCTCTCAGTGCCCAGAACCTGG...ACTGTTTCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp CCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCACCTCCATATTTTTCAGTTaGGCAATCCACCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: PGFMAASGENSRQKVRVTSIFFS*AIHQVL
Trigger: CAGAACCTGGTGGATTGCTCAACTGAAAAATATGGA...GGTGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp TCCCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCATGCCCTTGTTATCAATaGTGTACTGGAAAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: SQVLWLLLGRTAGRRSESCPCYQ*CTGKPL
Trigger: CAACGGCTTTCCAGTACATCATTGATAACAAGGGCA...TGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp CCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCTACGGGATAGGAAGCGTCTaGGTCGATGCCCTTGTTATC +
Preference number: 4 (lower is better)
Translates to: PFLWVPGEHLLHDSLMIYGIGSV*VDALVI
Trigger: GATAACAAGGGCATCGACTCAGACGCTTCCTATCCC...GTAGATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp AGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGGGATAGGAAGCGTCTaGGTCGATGCCCTTGTTATC +
Preference number: 4 (lower is better)
Translates to: SGVISAQHSLNLLGSRNLGIGSV*VDALVI
Trigger: GATAACAAGGGCATCGACTCAGACGCTTCCTATCCC...GAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR TCA 90 bp GGTAAGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTAGGAAGAAAGAAGGATaGCGCGCATCTACACCAACA +
Preference number: 4 (lower is better)
Translates to: GKDAPFLWVPGEHLLHDSRKKEG*RASTPT
Trigger: TGTTGGTGTAGATGCGCGTCATCCTTCTTTCTTCCT...ACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp TCCCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCACTACACGTGGCGTTTTaGATCCTCTTCTGTACAAAG +
Preference number: 4 (lower is better)
Translates to: SQVLWLLLGRTAGRRSESLHVAF*ILFCTK
Trigger: CTTTGTACAGAAGAGGATTCAAAACGCCACGTGTAG...TGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp CCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCTACCCTCCTGGGCTCTTGTaGTCCTCCTGTCTTAGACAT +
Preference number: 4 (lower is better)
Translates to: PFLWVPGEHLLHDSLMIYPPGLL*SSCLRH
Trigger: ATGTCTAAGACAGGAGGATCACAAGAGCCCAGGAGG...GTAGATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp AGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCCCTCCTGGGCTCTTGTaGTCCTCCTGTCTTAGACAT +
Preference number: 4 (lower is better)
Translates to: SGVISAQHSLNLLGSRNLPPGLL*SSCLRH
Trigger: ATGTCTAAGACAGGAGGATCACAAGAGCCCAGGAGG...GAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp TCCCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCAATGAAGAGCAGCCAGTaGTGTAGAAATGTCATAGGG +
Preference number: 4 (lower is better)
Translates to: SQVLWLLLGRTAGRRSESMKSSQ*CRNVIG
Trigger: CCCTATGACATTTCTACATCACTGGCTGCTCTTCAT...TGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR GCA 90 bp GGTAAGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTGATAGAACCAGCAGTTaGTCCCACAGTAAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: GKDAPFLWVPGEHLLHDSDRTSS*SHSKSP
Trigger: AGGACTCTTACTGTGGGAGCAACTGCTGGTTCTATC...ACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR GCA 90 bp AGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCATGCAACTGTGCCACTaGAGAGGAGCACACCAAGAG +
Preference number: 4 (lower is better)
Translates to: SGVISAQHSLNLLGSRNLMQLCH*RGAHQE
Trigger: CTCTTGGTGTGCTCCTCTGCAGTGGCACAGTTGCAT...GAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR GCA 90 bp CCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCTACATGCAACTGTGCCACTaGAGAGGAGCACACCAAGAG +
Preference number: 4 (lower is better)
Translates to: PFLWVPGEHLLHDSLMIYMQLCH*RGAHQE
Trigger: CTCTTGGTGTGCTCCTCTGCAGTGGCACAGTTGCAT...GTAGATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
CDS-3UTR GCA 90 bp GGTAAGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTAGGGTAGGATCTTTATaGAACTGTGCCACTGCAGAG +
Preference number: 4 (lower is better)
Translates to: GKDAPFLWVPGEHLLHDSRVGSL*NCATAE
Trigger: CTCTGCAGTGGCACAGTTGCATAAAGATCCTACCCT...ACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
CDS-3UTR GCA 90 bp TCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCAGGGTAGGATCTTTATaGAACTGTGCCACTGCAGAG +
Preference number: 4 (lower is better)
Translates to: SQLNIASTSWVQGISCLSRVGSL*NCATAE
Trigger: CTCTGCAGTGGCACAGTTGCATAAAGATCCTACCCT...GCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR GCA 90 bp TGGCGTGATCTCGGCTCACTGCACCTCCACCTCCTGAGTTCAAGCGATTCTCCTGATGAGACGTCGTACTaGTTCTTCATTCTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: WRDLGSLHLHLLSSSDSPDETSY*FFILFL
Trigger: AAGGAAAAGAATGAAGAAGCAGTACGACGTCTCATC...AGGAGAATCGCTTGAACTCAGGAGGTGGAGGTGCAGTGAGCCGAGATCACGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679582.1
CDS-3UTR GCA 90 bp CAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCCTCTATGTGATATTTCTCTaGCACTGGCTGGGAACTCTC +
Preference number: 4 (lower is better)
Translates to: QLNIASTSWVQGISCLSLYVIFL*HWLGTL
Trigger: GAGAGTTCCCAGCCAGTGGCAGAGAAATATCACATA...GAGGCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR GCA 90 bp TCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCCAATTACAAGCTCACTaGATTCTCAACCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SQLNIASTSWVQGISCLSQLQAH*ILNLLG
Trigger: GCCCAGGAGGTTGAGAATGCAGTGAGCTTGTAATTG...GCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR GCA 90 bp CCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCTACCCCAGGTTTTATGGCTaGTTCTGGGGAGAACAGCAG +
Preference number: 4 (lower is better)
Translates to: PFLWVPGEHLLHDSLMIYPRFYG*FWGEQQ
Trigger: CTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGGG...GTAGATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR GCA 90 bp GTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCTTAAAGGCAGAGGTTaGGGTGAGCTGAGATCATGC +
Preference number: 4 (lower is better)
Translates to: VISAQHSLNLLGSRNLVPLKGRG*GELRSC
Trigger: GCATGATCTCAGCTCACCGCAACCTCTGCCTTTAAG...AGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680931.1
CDS-3UTR CCA 90 bp GAGTACAGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGGTCATGTCTCCCAGGTaGTTCATGCCCAGATCGTAT +
Preference number: 4 (lower is better)
Translates to: EYSGVISAQHSLNLLGSRVMSPR*FMPRSY
Trigger: ATACGATCTGGGCATGAACCACCTGGGAGACATGAC...CCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACTGTACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR CCA 90 bp AGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCTTCTCTGCCACTGGCTaGGAACTCTCAGGGAACTCA +
Preference number: 4 (lower is better)
Translates to: SGVISAQHSLNLLGSRNLFSATG*ELSGNS
Trigger: TGAGTTCCCTGAGAGTTCCCAGCCAGTGGCAGAGAA...GAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR CCA 90 bp GGTAAGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTACACTGGGCCTTTATTaGCCACAGCTTCTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: GKDAPFLWVPGEHLLHDSTLGLY*PQLLSG
Trigger: TCCTGAAAGAAGCTGTGGCCAATAAAGGCCCAGTGT...ACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp TCCCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCATCTTCACCAAAGTTGTaGCCCCAGCTGTTTTTCACA +
Preference number: 4 (lower is better)
Translates to: SQVLWLLLGRTAGRRSESSSPKL*PQLFFT
Trigger: TGTGAAAAACAGCTGGGGCCACAACTTTGGTGAAGA...TGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp CAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCCTCGATCCTCTAGATTTCTaGGTAAGAGGGAAAGCTAGC +
Preference number: 4 (lower is better)
Translates to: QLNIASTSWVQGISCLSLDPLDF*VRGKAS
Trigger: GCTAGCTTTCCCTCTTACCCAGAAATCTAGAGGATC...GAGGCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR CCA 90 bp GTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTTTGATATGCCTGCCTTaGCCTCCCAAGTACTGGGAT +
Preference number: 4 (lower is better)
Translates to: VISAQHSLNLLGSRNLVPLICLP*PPKYWD
Trigger: ATCCCAGTACTTGGGAGGCCAAGGCAGGCATATCAA...AGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR CCA 90 bp AAGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTCAGGCTGGAGTACAGTaGTGTGATCTCAGCTCAACA +
Preference number: 4 (lower is better)
Translates to: KDAPFLWVPGEHLLHDSLQAGVQ*CDLSST
Trigger: TGTTGAGCTGAGATCACACCACTGTACTCCAGCCTG...AAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp GTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGGCTGGAGTACAGTaGTGTGATCTCAGCTCAACA +
Preference number: 4 (lower is better)
Translates to: VISAQHSLNLLGSRNLVPQAGVQ*CDLSST
Trigger: TGTTGAGCTGAGATCACACCACTGTACTCCAGCCTG...AGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR CCA 90 bp AGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTTGTGGCCCCAGCATaGCTTTGTAGGGATAGGAAG +
Preference number: 4 (lower is better)
Translates to: SGVISAQHSLNLLGSRNLVVAPA*LCRDRK
Trigger: CTTCCTATCCCTACAAAGCCATGCTGGGGCCACAAC...GAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680311.1
CDS-3UTR TCA 90 bp GGTAAGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCACAGTAAGAGTCCTTaGATTAGTGGGCTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: GKDAPFLWVPGEHLLHDSHSKSP*ISGLSS
Trigger: AGAAGAGAGCCCACTAATTCAAGGACTCTTACTGTG...ACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp CAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCCTCGAATGCTCCAGGTTGTaGAGCATCACAAACTTTAGA +
Preference number: 4 (lower is better)
Translates to: QLNIASTSWVQGISCLSLECSRL*SITNFR
Trigger: TCTAAAGTTTGTGATGCTTCACAACCTGGAGCATTC...GAGGCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR TCA 90 bp TCCCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCAGAATGCTCCAGGTTGTaGAGCATCACAAACTTTAGA +
Preference number: 4 (lower is better)
Translates to: SQVLWLLLGRTAGRRSESECSRL*SITNFR
Trigger: TCTAAAGTTTGTGATGCTTCACAACCTGGAGCATTC...TGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp CAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCCTCGGTTTGACTTATATGTaGTATTTCTCTGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: QLNIASTSWVQGISCLSLGLTYM*YFSATG
Trigger: GCCAGTGGCAGAGAAATATCACATATAAGTCAAACC...GAGGCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR TCA 90 bp GTAAGAGGGAAAGCTAGCAATCCCACAATGATTTCCTTTATTTCTTGCCATCCGCCAGGTTCTGGGCACTaGGAGACACCAGCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: VRGKASNPTMISFISCHPPGSGH*ETPAFL
Trigger: CAGGAAAGCTGGTGTCTCTCAGTGCCCAGAACCTGG...CGGATGGCAAGAAATAAAGGAAATCATTGTGGGATTGCTAGCTTTCCCTCTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR TCA 90 bp CAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCCTCTCCATATTTTTCAGTTaGGCAATCCACCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: QLNIASTSWVQGISCLSLSIFFS*AIHQVL
Trigger: CAGAACCTGGTGGATTGCTCAACTGAAAAATATGGA...GAGGCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR TCA 90 bp TCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCTGCCCTTGTTATCAATaGTGTACTGGAAAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: SQLNIASTSWVQGISCLSCPCYQ*CTGKPL
Trigger: CAACGGCTTTCCAGTACATCATTGATAACAAGGGCA...GCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR TCA 90 bp GCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCAGGAAGAAAGAAGGATaGCGCGCATCTACACCAACA +
Preference number: 4 (lower is better)
Translates to: APFLWVPGEHLLHDSLMIRKKEG*RASTPT
Trigger: TGTTGGTGTAGATGCGCGTCATCCTTCTTTCTTCCT...GATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp ATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGAGGAAGAAAGAAGGATaGCGCGCATCTACACCAACA +
Preference number: 4 (lower is better)
Translates to: ISAQHSLNLLGSRNLVPQRKKEG*RASTPT
Trigger: TGTTGGTGTAGATGCGCGTCATCCTTCTTTCTTCCT...CTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR TCA 90 bp GAGTACAGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAGGAAGAAAGAAGGATaGCGCGCATCTACACCAACA +
Preference number: 4 (lower is better)
Translates to: EYSGVISAQHSLNLLGSRRKKEG*RASTPT
Trigger: TGTTGGTGTAGATGCGCGTCATCCTTCTTTCTTCCT...CCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACTGTACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR TCA 90 bp GATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGAGGAAGAAAGAAGGATaGCGCGCATCTACACCAACA +
Preference number: 4 (lower is better)
Translates to: DAPFLWVPGEHLLHDSLMRKKEG*RASTPT
Trigger: TGTTGGTGTAGATGCGCGTCATCCTTCTTTCTTCCT...CATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp GTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTAGGAAGAAAGAAGGATaGCGCGCATCTACACCAACA +
Preference number: 4 (lower is better)
Translates to: VISAQHSLNLLGSRNLVPRKKEG*RASTPT
Trigger: TGTTGGTGTAGATGCGCGTCATCCTTCTTTCTTCCT...AGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR TCA 90 bp TCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCGGCAGAAGAATTGCTTaGACCTTAAAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: SQLNIASTSWVQGISCLSGRRIA*TLKAEV
Trigger: AACCTCTGCCTTTAAGGTTCAAGCAATTCTTCTGCC...GCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680931.1
CDS-3UTR GCA 90 bp GCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCGATAGAACCAGCAGTTaGTCCCACAGTAAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: APFLWVPGEHLLHDSLMIDRTSS*SHSKSP
Trigger: AGGACTCTTACTGTGGGAGCAACTGCTGGTTCTATC...GATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR GCA 90 bp GTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTATCTTTATGCAACTGTaGCACTGCAGAGGAGCACAC +
Preference number: 4 (lower is better)
Translates to: VISAQHSLNLLGSRNLVPIFMQL*HCRGAH
Trigger: GTGTGCTCCTCTGCAGTGGCACAGTTGCATAAAGAT...AGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR GCA 90 bp AAGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATCTTTATGCAACTGTaGCACTGCAGAGGAGCACAC +
Preference number: 4 (lower is better)
Translates to: KDAPFLWVPGEHLLHDSLIFMQL*HCRGAH
Trigger: GTGTGCTCCTCTGCAGTGGCACAGTTGCATAAAGAT...AAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
CDS-3UTR GCA 90 bp AGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTAATCTTTATGCAACTGTaGCACTGCAGAGGAGCACAC +
Preference number: 4 (lower is better)
Translates to: RMLLFSGCQESTSYMTVLIFMQL*HCRGAH
Trigger: GTGTGCTCCTCTGCAGTGGCACAGTTGCATAAAGAT...TAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
CDS-3UTR GCA 90 bp GATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGAGGGTAGGATCTTTATaGAACTGTGCCACTGCAGAG +
Preference number: 4 (lower is better)
Translates to: DAPFLWVPGEHLLHDSLMRVGSL*NCATAE
Trigger: CTCTGCAGTGGCACAGTTGCATAAAGATCCTACCCT...CATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
CDS-3UTR GCA 90 bp GCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCAGGGTAGGATCTTTATaGAACTGTGCCACTGCAGAG +
Preference number: 4 (lower is better)
Translates to: APFLWVPGEHLLHDSLMIRVGSL*NCATAE
Trigger: CTCTGCAGTGGCACAGTTGCATAAAGATCCTACCCT...GATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
CDS-3UTR GCA 90 bp ATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGAGGGTAGGATCTTTATaGAACTGTGCCACTGCAGAG +
Preference number: 4 (lower is better)
Translates to: ISAQHSLNLLGSRNLVPQRVGSL*NCATAE
Trigger: CTCTGCAGTGGCACAGTTGCATAAAGATCCTACCCT...CTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR GCA 90 bp AAGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTCCCAGATCGTATGAGTaGATTCCCATTGAATGCTCC +
Preference number: 4 (lower is better)
Translates to: KDAPFLWVPGEHLLHDSLPRSYE*IPIECS
Trigger: GGAGCATTCAATGGGAATGCACTCATACGATCTGGG...AAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR GCA 90 bp AGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTACCCAGATCGTATGAGTaGATTCCCATTGAATGCTCC +
Preference number: 4 (lower is better)
Translates to: RMLLFSGCQESTSYMTVLPRSYE*IPIECS
Trigger: GGAGCATTCAATGGGAATGCACTCATACGATCTGGG...TAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR GCA 90 bp ATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCCCAGATCGTATGAGTaGATTCCCATTGAATGCTCC +
Preference number: 4 (lower is better)
Translates to: ISAQHSLNLLGSRNLVPQPRSYE*IPIECS
Trigger: GGAGCATTCAATGGGAATGCACTCATACGATCTGGG...CTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR GCA 90 bp TCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCTATGTGATATTTCTCTaGCACTGGCTGGGAACTCTC +
Preference number: 4 (lower is better)
Translates to: SQLNIASTSWVQGISCLSYVIFL*HWLGTL
Trigger: GAGAGTTCCCAGCCAGTGGCAGAGAAATATCACATA...GCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR GCA 90 bp GGTAAGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTTATGTGATATTTCTCTaGCACTGGCTGGGAACTCTC +
Preference number: 4 (lower is better)
Translates to: GKDAPFLWVPGEHLLHDSYVIFL*HWLGTL
Trigger: GAGAGTTCCCAGCCAGTGGCAGAGAAATATCACATA...ACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000680664.1
CDS-3UTR GCA 90 bp CATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAAACTATATTTTCTTTTCAGCTTCAGCTGTaGTTCCAGGGCCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: HSLNLLGSRNLVPQTIFSFQLQL*FQGPHS
Trigger: GCTGTGGGGGCCCTGGAAGCACAGCTGAAGCTGAAA...AGAAAATATAGTTTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000681444.1
CDS-3UTR GCA 90 bp TCCCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCATCAGGACATCTTCTCTaGCATAAGGAAGTTCAGTGT +
Preference number: 4 (lower is better)
Translates to: SQVLWLLLGRTAGRRSESSGHLL*HKEVQC
Trigger: ACACTGAACTTCCTTATGGCAGAGAAGATGTCCTGA...TGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR GCA 90 bp AGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTACAATTACAAGCTCACTaGATTCTCAACCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RMLLFSGCQESTSYMTVLQLQAH*ILNLLG
Trigger: GCCCAGGAGGTTGAGAATGCAGTGAGCTTGTAATTG...TAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp CCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCTACGTCATGTCTCCCAGGTaGTTCATGCCCAGATCGTAT +
Preference number: 4 (lower is better)
Translates to: PFLWVPGEHLLHDSLMIYVMSPR*FMPRSY
Trigger: ATACGATCTGGGCATGAACCACCTGGGAGACATGAC...GTAGATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000680664.1
CDS-3UTR CCA 90 bp TGGCGTGATCTCGGCTCACTGCACCTCCACCTCCTGAGTTCAAGCGATTCTCCTTTATCAATGATGTACTaGAAAGCCGTTGTCATGAAG +
Preference number: 4 (lower is better)
Translates to: WRDLGSLHLHLLSSSDSPLSMMY*KAVVMK
Trigger: CTTCATGACAACGGCTTTCCAGTACATCATTGATAA...AGGAGAATCGCTTGAACTCAGGAGGTGGAGGTGCAGTGAGCCGAGATCACGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679582.1
CDS-3UTR CCA 90 bp TCCCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCAGACATTTCTGATCCATaGCTTTGTAGGGATAGGAAG +
Preference number: 4 (lower is better)
Translates to: SQVLWLLLGRTAGRRSESDISDP*LCRDRK
Trigger: CTTCCTATCCCTACAAAGCCATGGATCAGAAATGTC...TGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp CCAGGCTGCTCTTTAACTCCTGGCCTCAAGTTGATATGCCTGCCTTGGCCTCCCTGTACTTTGAACATGTaGCAGCACGATATTTTGAGT +
Preference number: 4 (lower is better)
Translates to: PGCSLTPGLKLICLPWPPCTLNM*QHDILS
Trigger: ACTCAAAATATCGTGCTGCCACATGTTCAAAGTACA...GGGAGGCCAAGGCAGGCATATCAACTTGAGGCCAGGAGTTAAAGAGCAGCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR CCA 90 bp ATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGACACTGGGCCTTTATTaGCCACAGCTTCTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: ISAQHSLNLLGSRNLVPQTLGLY*PQLLSG
Trigger: TCCTGAAAGAAGCTGTGGCCAATAAAGGCCCAGTGT...CTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR CCA 90 bp AAGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTACACTGGGCCTTTATTaGCCACAGCTTCTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: KDAPFLWVPGEHLLHDSLTLGLY*PQLLSG
Trigger: TCCTGAAAGAAGCTGTGGCCAATAAAGGCCCAGTGT...AAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp CCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCACCATTCTGAGTACAGGATaGTTCATAGTAGACACCACT +
Preference number: 4 (lower is better)
Translates to: PGFMAASGENSRQKVRVTILSTG*FIVDTT
Trigger: AGTGGTGTCTACTATGAACCATCCTGTACTCAGAAT...GGTGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp AGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCTTGATATGCCTGCCTTaGCCTCCCAAGTACTGGGAT +
Preference number: 4 (lower is better)
Translates to: SGVISAQHSLNLLGSRNLLICLP*PPKYWD
Trigger: ATCCCAGTACTTGGGAGGCCAAGGCAGGCATATCAA...GAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR CCA 90 bp AGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCCAGGCTGGAGTACAGTaGTGTGATCTCAGCTCAACA +
Preference number: 4 (lower is better)
Translates to: SGVISAQHSLNLLGSRNLQAGVQ*CDLSST
Trigger: TGTTGAGCTGAGATCACACCACTGTACTCCAGCCTG...GAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR CCA 90 bp TCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAAACTCAGGCTGGAGTACAGTaGTGTGATCTCAGCTCAACA +
Preference number: 4 (lower is better)
Translates to: SAQHSLNLLGSRNLVPQTQAGVQ*CDLSST
Trigger: TGTTGAGCTGAGATCACACCACTGTACTCCAGCCTG...AGTTTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681444.1
CDS-3UTR CCA 90 bp GTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCCAGCCTGGCTAATGTaGCAAAACCCTGTCTTTACT +
Preference number: 4 (lower is better)
Translates to: VISAQHSLNLLGSRNLVPPAWLM*QNPVFT
Trigger: AGTAAAGACAGGGTTTTGCCACATTAGCCAGGCTGG...AGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp GCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCCCAGCCTGGCTAATGTaGCAAAACCCTGTCTTTACT +
Preference number: 4 (lower is better)
Translates to: APFLWVPGEHLLHDSLMIPAWLM*QNPVFT
Trigger: AGTAAAGACAGGGTTTTGCCACATTAGCCAGGCTGG...GATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp AGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTACCAGCCTGGCTAATGTaGCAAAACCCTGTCTTTACT +
Preference number: 4 (lower is better)
Translates to: RMLLFSGCQESTSYMTVLPAWLM*QNPVFT
Trigger: AGTAAAGACAGGGTTTTGCCACATTAGCCAGGCTGG...TAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp GCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCAGTTTGAGACCAGCCTaGCTAATGTGGCAAAACCCT +
Preference number: 4 (lower is better)
Translates to: APFLWVPGEHLLHDSLMISLRPA*LMWQNP
Trigger: AGGGTTTTGCCACATTAGCCAGGCTGGTCTCAAACT...GATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp ATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCACAGTAAGAGTCCTTaGATTAGTGGGCTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: ISAQHSLNLLGSRNLVPQHSKSP*ISGLSS
Trigger: AGAAGAGAGCCCACTAATTCAAGGACTCTTACTGTG...CTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR TCA 90 bp AAGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTCACAGTAAGAGTCCTTaGATTAGTGGGCTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: KDAPFLWVPGEHLLHDSLHSKSP*ISGLSS
Trigger: AGAAGAGAGCCCACTAATTCAAGGACTCTTACTGTG...AAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp GAGTACAGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGGATTCTTTTCCCAGATaGGACGTCGTACTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: EYSGVISAQHSLNLLGSRDSFPR*DVVLLL
Trigger: AAGAAGCAGTACGACGTCTCATCTGGGAAAAGAATC...CCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACTGTACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR TCA 90 bp GATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGGATTCTTTTCCCAGATaGGACGTCGTACTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: DAPFLWVPGEHLLHDSLMDSFPR*DVVLLL
Trigger: AAGAAGCAGTACGACGTCTCATCTGGGAAAAGAATC...CATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp GTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTGATTCTTTTCCCAGATaGGACGTCGTACTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: VISAQHSLNLLGSRNLVPDSFPR*DVVLLL
Trigger: AAGAAGCAGTACGACGTCTCATCTGGGAAAAGAATC...AGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR TCA 90 bp ATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGGATTCTTTTCCCAGATaGGACGTCGTACTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: ISAQHSLNLLGSRNLVPQDSFPR*DVVLLL
Trigger: AAGAAGCAGTACGACGTCTCATCTGGGAAAAGAATC...CTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR TCA 90 bp AAGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTGATTCTTTTCCCAGATaGGACGTCGTACTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: KDAPFLWVPGEHLLHDSLDSFPR*DVVLLL
Trigger: AAGAAGCAGTACGACGTCTCATCTGGGAAAAGAATC...AAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp GGTAAGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTGGTTTGACTTATATGTaGTATTTCTCTGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: GKDAPFLWVPGEHLLHDSGLTYM*YFSATG
Trigger: GCCAGTGGCAGAGAAATATCACATATAAGTCAAACC...ACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000680664.1
CDS-3UTR TCA 90 bp AGAGGGAAAGCTAGCAATCCCACAATGATTTCCTTTATTTCTTGCCATCCGAATCCAGGTTCTGGGCACTaGGAGACACCAGCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: RGKASNPTMISFISCHPNPGSGH*ETPAFL
Trigger: CAGGAAAGCTGGTGTCTCTCAGTGCCCAGAACCTGG...ATTCGGATGGCAAGAAATAAAGGAAATCATTGTGGGATTGCTAGCTTTCCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR TCA 90 bp GAGTACAGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGTGCCCTTGTTATCAATaGTGTACTGGAAAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: EYSGVISAQHSLNLLGSRCPCYQ*CTGKPL
Trigger: CAACGGCTTTCCAGTACATCATTGATAACAAGGGCA...CCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACTGTACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR TCA 90 bp TCCCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCAGGCAGCACGATATTTTaGGTCATATTGACATTTCTG +
Preference number: 4 (lower is better)
Translates to: SQVLWLLLGRTAGRRSESGSTIF*VILTFL
Trigger: CAGAAATGTCAATATGACTCAAAATATCGTGCTGCC...TGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp TCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCAAGTTCAGTGTACTTTaGACATGTGGCAGCACGATA +
Preference number: 4 (lower is better)
Translates to: SQLNIASTSWVQGISCLSKFSVL*TCGSTI
Trigger: TATCGTGCTGCCACATGTTCAAAGTACACTGAACTT...GCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR TCA 90 bp AGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCAGGAAGAAAGAAGGATaGCGCGCATCTACACCAACA +
Preference number: 4 (lower is better)
Translates to: SGVISAQHSLNLLGSRNLRKKEG*RASTPT
Trigger: TGTTGGTGTAGATGCGCGTCATCCTTCTTTCTTCCT...GAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR TCA 90 bp ATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCTACACGTGGCGTTTTaGATCCTCTTCTGTACAAAG +
Preference number: 4 (lower is better)
Translates to: ISAQHSLNLLGSRNLVPQLHVAF*ILFCTK
Trigger: CTTTGTACAGAAGAGGATTCAAAACGCCACGTGTAG...CTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp GATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGCTACACGTGGCGTTTTaGATCCTCTTCTGTACAAAG +
Preference number: 4 (lower is better)
Translates to: DAPFLWVPGEHLLHDSLMLHVAF*ILFCTK
Trigger: CTTTGTACAGAAGAGGATTCAAAACGCCACGTGTAG...CATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp AAGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTCTACACGTGGCGTTTTaGATCCTCTTCTGTACAAAG +
Preference number: 4 (lower is better)
Translates to: KDAPFLWVPGEHLLHDSLLHVAF*ILFCTK
Trigger: CTTTGTACAGAAGAGGATTCAAAACGCCACGTGTAG...AAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp GAGTACAGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGCTACACGTGGCGTTTTaGATCCTCTTCTGTACAAAG +
Preference number: 4 (lower is better)
Translates to: EYSGVISAQHSLNLLGSRLHVAF*ILFCTK
Trigger: CTTTGTACAGAAGAGGATTCAAAACGCCACGTGTAG...CCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACTGTACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp AGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGAAACAGTGAAGTTGCAGTGAACTaGGATGGTGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: SFTRHEGLHKEIKAQRNSEVAVN*DGATAL
Trigger: GAGTGCAGTGGCACCATCTCAGTTCACTGCAACTTC...ACTGTTTCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp AGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGAAACAGTAGGCAGAAGTTGCAGTaGACTGAGATGGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: SFTRHEGLHKEIKAQRNSRQKLQ*TEMVPL
Trigger: CAGTGGCACCATCTCAGTTCACTGCAACTTCTGCCT...ACTGTTTCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp CCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCACCAATTATGTTAAAAACTaGAAAGTAGGCTGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: PGFMAASGENSRQKVRVTNYVKN*KVGWAQ
Trigger: CTGAGCCCAGCCTACTTTTCAGTTTTTAACATAATT...GGTGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp GTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTATGAAGAGCAGCCAGTaGTGTAGAAATGTCATAGGG +
Preference number: 4 (lower is better)
Translates to: VISAQHSLNLLGSRNLVPMKSSQ*CRNVIG
Trigger: CCCTATGACATTTCTACATCACTGGCTGCTCTTCAT...AGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp AGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTAATGAAGAGCAGCCAGTaGTGTAGAAATGTCATAGGG +
Preference number: 4 (lower is better)
Translates to: RMLLFSGCQESTSYMTVLMKSSQ*CRNVIG
Trigger: CCCTATGACATTTCTACATCACTGGCTGCTCTTCAT...TAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp GATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATGAAGAGCAGCCAGTaGTGTAGAAATGTCATAGGG +
Preference number: 4 (lower is better)
Translates to: DAPFLWVPGEHLLHDSLMMKSSQ*CRNVIG
Trigger: CCCTATGACATTTCTACATCACTGGCTGCTCTTCAT...CATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR GCA 90 bp AGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGATAGAACCAGCAGTTaGTCCCACAGTAAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: SGVISAQHSLNLLGSRNLDRTSS*SHSKSP
Trigger: AGGACTCTTACTGTGGGAGCAACTGCTGGTTCTATC...GAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR GCA 90 bp AGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGAAACAGTATGCAACTGTGCCACTaGAGAGGAGCACACCAAGAG +
Preference number: 4 (lower is better)
Translates to: SFTRHEGLHKEIKAQRNSMQLCH*RGAHQE
Trigger: CTCTTGGTGTGCTCCTCTGCAGTGGCACAGTTGCAT...ACTGTTTCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
CDS-3UTR GCA 90 bp CCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCTACATCTTTATGCAACTGTaGCACTGCAGAGGAGCACAC +
Preference number: 4 (lower is better)
Translates to: PFLWVPGEHLLHDSLMIYIFMQL*HCRGAH
Trigger: GTGTGCTCCTCTGCAGTGGCACAGTTGCATAAAGAT...GTAGATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
CDS-3UTR GCA 90 bp TCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAAACTAGGGTAGGATCTTTATaGAACTGTGCCACTGCAGAG +
Preference number: 4 (lower is better)
Translates to: SAQHSLNLLGSRNLVPQTRVGSL*NCATAE
Trigger: CTCTGCAGTGGCACAGTTGCATAAAGATCCTACCCT...AGTTTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681444.1
CDS-3UTR GCA 90 bp TCCCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCAGATGAGACGTCGTACTaGTTCTTCATTCTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: SQVLWLLLGRTAGRRSESDETSY*FFILFL
Trigger: AAGGAAAAGAATGAAGAAGCAGTACGACGTCTCATC...TGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000680288.1
CDS-3UTR GCA 90 bp CAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCCTCGATGAGACGTCGTACTaGTTCTTCATTCTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: QLNIASTSWVQGISCLSLDETSY*FFILFL
Trigger: AAGGAAAAGAATGAAGAAGCAGTACGACGTCTCATC...GAGGCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR GCA 90 bp TCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAAACTCCCAGATCGTATGAGTaGATTCCCATTGAATGCTCC +
Preference number: 4 (lower is better)
Translates to: SAQHSLNLLGSRNLVPQTPRSYE*IPIECS
Trigger: GGAGCATTCAATGGGAATGCACTCATACGATCTGGG...AGTTTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681444.1
CDS-3UTR GCA 90 bp GTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTTATGTGATATTTCTCTaGCACTGGCTGGGAACTCTC +
Preference number: 4 (lower is better)
Translates to: VISAQHSLNLLGSRNLVPYVIFL*HWLGTL
Trigger: GAGAGTTCCCAGCCAGTGGCAGAGAAATATCACATA...AGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR GCA 90 bp ATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGTATGTGATATTTCTCTaGCACTGGCTGGGAACTCTC +
Preference number: 4 (lower is better)
Translates to: ISAQHSLNLLGSRNLVPQYVIFL*HWLGTL
Trigger: GAGAGTTCCCAGCCAGTGGCAGAGAAATATCACATA...CTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR GCA 90 bp TTCTGGGTAAGAGGGAAAGCTAGCAATCCCACAATGATTTCCTTTATTTCTTGCTTTCAGCTTCAGCTGTaGTTCCAGGGCCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: FWVRGKASNPTMISFISCFQLQL*FQGPHS
Trigger: GCTGTGGGGGCCCTGGAAGCACAGCTGAAGCTGAAA...GCAAGAAATAAAGGAAATCATTGTGGGATTGCTAGCTTTCCCTCTTACCCAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR GCA 90 bp AGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTAGTTGGCTCAGTTATTTaGCAAATAAAGGCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: RMLLFSGCQESTSYMTVLVGSVI*QIKALV
Trigger: GACCAGGGCCTTTATTTGGCAAATAACTGAGCCAAC...TAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp CCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCACCTTATCAATGATGTACTaGAAAGCCGTTGTCATGAAG +
Preference number: 4 (lower is better)
Translates to: PGFMAASGENSRQKVRVTLSMMY*KAVVMK
Trigger: CTTCATGACAACGGCTTTCCAGTACATCATTGATAA...GGTGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp CCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCTACACACTGGGCCTTTATTaGCCACAGCTTCTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: PFLWVPGEHLLHDSLMIYTLGLY*PQLLSG
Trigger: TCCTGAAAGAAGCTGTGGCCAATAAAGGCCCAGTGT...GTAGATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp AGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCACACTGGGCCTTTATTaGCCACAGCTTCTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: SGVISAQHSLNLLGSRNLTLGLY*PQLLSG
Trigger: TCCTGAAAGAAGCTGTGGCCAATAAAGGCCCAGTGT...GAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR CCA 90 bp TCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAAACTACACTGGGCCTTTATTaGCCACAGCTTCTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: SAQHSLNLLGSRNLVPQTTLGLY*PQLLSG
Trigger: TCCTGAAAGAAGCTGTGGCCAATAAAGGCCCAGTGT...AGTTTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681444.1
CDS-3UTR CCA 90 bp TCCCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCAATTCTGAGTACAGGATaGTTCATAGTAGACACCACT +
Preference number: 4 (lower is better)
Translates to: SQVLWLLLGRTAGRRSESILSTG*FIVDTT
Trigger: AGTGGTGTCTACTATGAACCATCCTGTACTCAGAAT...TGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp GCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCTCTTCACCAAAGTTGTaGCCCCAGCTGTTTTTCACA +
Preference number: 4 (lower is better)
Translates to: APFLWVPGEHLLHDSLMISSPKL*PQLFFT
Trigger: TGTGAAAAACAGCTGGGGCCACAACTTTGGTGAAGA...GATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp ATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGTCTTCACCAAAGTTGTaGCCCCAGCTGTTTTTCACA +
Preference number: 4 (lower is better)
Translates to: ISAQHSLNLLGSRNLVPQSSPKL*PQLFFT
Trigger: TGTGAAAAACAGCTGGGGCCACAACTTTGGTGAAGA...CTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679898.1
ENST00000680288.1
ENST00000680471.1
ENST00000680664.1
CDS-3UTR CCA 90 bp AGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATCTTCACCAAAGTTGTaGCCCCAGCTGTTTTTCACA +
Preference number: 4 (lower is better)
Translates to: RMLLFSGCQESTSYMTVLSSPKL*PQLFFT
Trigger: TGTGAAAAACAGCTGGGGCCACAACTTTGGTGAAGA...TAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp AAGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTTCTTCACCAAAGTTGTaGCCCCAGCTGTTTTTCACA +
Preference number: 4 (lower is better)
Translates to: KDAPFLWVPGEHLLHDSLSSPKL*PQLFFT
Trigger: TGTGAAAAACAGCTGGGGCCACAACTTTGGTGAAGA...AAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp ATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGGATCCTCTAGATTTCTaGGTAAGAGGGAAAGCTAGC +
Preference number: 4 (lower is better)
Translates to: ISAQHSLNLLGSRNLVPQDPLDF*VRGKAS
Trigger: GCTAGCTTTCCCTCTTACCCAGAAATCTAGAGGATC...CTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR CCA 90 bp GAGTACAGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGGATCCTCTAGATTTCTaGGTAAGAGGGAAAGCTAGC +
Preference number: 4 (lower is better)
Translates to: EYSGVISAQHSLNLLGSRDPLDF*VRGKAS
Trigger: GCTAGCTTTCCCTCTTACCCAGAAATCTAGAGGATC...CCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACTGTACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR CCA 90 bp AGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCTCTTCACCAAAGTTGTaGCCCCAGCACTTCTGTAGA +
Preference number: 4 (lower is better)
Translates to: SGVISAQHSLNLLGSRNLSSPKL*PQHFCR
Trigger: TCTACAGAAGTGCTGGGGCCACAACTTTGGTGAAGA...GAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679512.1
CDS-3UTR CCA 90 bp GGTAAGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTATTTCCCTATGGTCTTaGGGACAAAGTGGATACAGT +
Preference number: 4 (lower is better)
Translates to: GKDAPFLWVPGEHLLHDSISLWS*GQSGYS
Trigger: ACTGTATCCACTTTGTCCCCAAGACCATAGGGAAAT...ACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680288.1
CDS-3UTR TCA 90 bp AGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCCACAGTAAGAGTCCTTaGATTAGTGGGCTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: SGVISAQHSLNLLGSRNLHSKSP*ISGLSS
Trigger: AGAAGAGAGCCCACTAATTCAAGGACTCTTACTGTG...GAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR TCA 90 bp AGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGATTCTTTTCCCAGATaGGACGTCGTACTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SGVISAQHSLNLLGSRNLDSFPR*DVVLLL
Trigger: AAGAAGCAGTACGACGTCTCATCTGGGAAAAGAATC...GAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR TCA 90 bp CCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCTACGATTCTTTTCCCAGATaGGACGTCGTACTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: PFLWVPGEHLLHDSLMIYDSFPR*DVVLLL
Trigger: AAGAAGCAGTACGACGTCTCATCTGGGAAAAGAATC...GTAGATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp AGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTAGAATGCTCCAGGTTGTaGAGCATCACAAACTTTAGA +
Preference number: 4 (lower is better)
Translates to: RMLLFSGCQESTSYMTVLECSRL*SITNFR
Trigger: TCTAAAGTTTGTGATGCTTCACAACCTGGAGCATTC...TAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp GCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCGAATGCTCCAGGTTGTaGAGCATCACAAACTTTAGA +
Preference number: 4 (lower is better)
Translates to: APFLWVPGEHLLHDSLMIECSRL*SITNFR
Trigger: TCTAAAGTTTGTGATGCTTCACAACCTGGAGCATTC...GATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp ATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGGAATGCTCCAGGTTGTaGAGCATCACAAACTTTAGA +
Preference number: 4 (lower is better)
Translates to: ISAQHSLNLLGSRNLVPQECSRL*SITNFR
Trigger: TCTAAAGTTTGTGATGCTTCACAACCTGGAGCATTC...CTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR TCA 90 bp ATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGGGTTTGACTTATATGTaGTATTTCTCTGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: ISAQHSLNLLGSRNLVPQGLTYM*YFSATG
Trigger: GCCAGTGGCAGAGAAATATCACATATAAGTCAAACC...CTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR TCA 90 bp AGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTAGGTTTGACTTATATGTaGTATTTCTCTGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: RMLLFSGCQESTSYMTVLGLTYM*YFSATG
Trigger: GCCAGTGGCAGAGAAATATCACATATAAGTCAAACC...TAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000680664.1
CDS-3UTR TCA 90 bp GTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTGGTTTGACTTATATGTaGTATTTCTCTGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: VISAQHSLNLLGSRNLVPGLTYM*YFSATG
Trigger: GCCAGTGGCAGAGAAATATCACATATAAGTCAAACC...AGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR TCA 90 bp GTTATAAAAAGGAGAGATCCTCTAGATTTCTGGGTAAGAGGGAAAGCTAGCAATCCAGGTTCTGGGCACTaGGAGACACCAGCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: VIKRRDPLDFWVRGKASNPGSGH*ETPAFL
Trigger: CAGGAAAGCTGGTGTCTCTCAGTGCCCAGAACCTGG...ATTGCTAGCTTTCCCTCTTACCCAGAAATCTAGAGGATCTCTCCTTTTTATAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR TCA 90 bp AGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATCCATATTTTTCAGTTaGGCAATCCACCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: RMLLFSGCQESTSYMTVLSIFFS*AIHQVL
Trigger: CAGAACCTGGTGGATTGCTCAACTGAAAAATATGGA...TAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp GAGTACAGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGTCCATATTTTTCAGTTaGGCAATCCACCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: EYSGVISAQHSLNLLGSRSIFFS*AIHQVL
Trigger: CAGAACCTGGTGGATTGCTCAACTGAAAAATATGGA...CCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACTGTACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR TCA 90 bp GTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTTCCATATTTTTCAGTTaGGCAATCCACCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: VISAQHSLNLLGSRNLVPSIFFS*AIHQVL
Trigger: CAGAACCTGGTGGATTGCTCAACTGAAAAATATGGA...AGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR TCA 90 bp CCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCTACTGCCCTTGTTATCAATaGTGTACTGGAAAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: PFLWVPGEHLLHDSLMIYCPCYQ*CTGKPL
Trigger: CAACGGCTTTCCAGTACATCATTGATAACAAGGGCA...GTAGATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp CATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAAACTATATTTTCTGGGATAGGAAGCGTCTaGGTCGATGCCCTTGTTATC +
Preference number: 4 (lower is better)
Translates to: HSLNLLGSRNLVPQTIFSGIGSV*VDALVI
Trigger: GATAACAAGGGCATCGACTCAGACGCTTCCTATCCC...AGAAAATATAGTTTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681444.1
CDS-3UTR TCA 90 bp AGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTAAAGTTCAGTGTACTTTaGACATGTGGCAGCACGATA +
Preference number: 4 (lower is better)
Translates to: RMLLFSGCQESTSYMTVLKFSVL*TCGSTI
Trigger: TATCGTGCTGCCACATGTTCAAAGTACACTGAACTT...TAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp GCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCAAGTTCAGTGTACTTTaGACATGTGGCAGCACGATA +
Preference number: 4 (lower is better)
Translates to: APFLWVPGEHLLHDSLMIKFSVL*TCGSTI
Trigger: TATCGTGCTGCCACATGTTCAAAGTACACTGAACTT...GATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp GATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGAAGTTCAGTGTACTTTaGACATGTGGCAGCACGATA +
Preference number: 4 (lower is better)
Translates to: DAPFLWVPGEHLLHDSLMKFSVL*TCGSTI
Trigger: TATCGTGCTGCCACATGTTCAAAGTACACTGAACTT...CATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp GAGTACAGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAAGTTCAGTGTACTTTaGACATGTGGCAGCACGATA +
Preference number: 4 (lower is better)
Translates to: EYSGVISAQHSLNLLGSRKFSVL*TCGSTI
Trigger: TATCGTGCTGCCACATGTTCAAAGTACACTGAACTT...CCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACTGTACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR TCA 90 bp CAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCCTCAATTATGTTAAAAACTaGAAAGTAGGCTGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: QLNIASTSWVQGISCLSLNYVKN*KVGWAQ
Trigger: CTGAGCCCAGCCTACTTTTCAGTTTTTAACATAATT...GAGGCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp AGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCATGAAGAGCAGCCAGTaGTGTAGAAATGTCATAGGG +
Preference number: 4 (lower is better)
Translates to: SGVISAQHSLNLLGSRNLMKSSQ*CRNVIG
Trigger: CCCTATGACATTTCTACATCACTGGCTGCTCTTCAT...GAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp GTTATAAAAAGGAGAGATCCTCTAGATTTCTGGGTAAGAGGGAAAGCTAGCAATGAGGTTGCAGTGAGCTaGGATCGTGCCACCTCACTC +
Preference number: 4 (lower is better)
Translates to: VIKRRDPLDFWVRGKASNEVAVS*DRATSL
Trigger: GAGTGAGGTGGCACGATCTCAGCTCACTGCAACCTC...ATTGCTAGCTTTCCCTCTTACCCAGAAATCTAGAGGATCTCTCCTTTTTATAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483930.2
CDS-3UTR TCA 90 bp TCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCTTGGAACTTGTCACATaGGGTACTCAAAATGAGGAA +
Preference number: 4 (lower is better)
Translates to: SQLNIASTSWVQGISCLSLELVT*GTQNEE
Trigger: TTCCTCATTTTGAGTACCTCATGTGACAAGTTCCAA...GCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680288.1
CDS-3UTR GCA 90 bp CATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAAACTATATTTTCTATGCAACTGTGCCACTaGAGAGGAGCACACCAAGAG +
Preference number: 4 (lower is better)
Translates to: HSLNLLGSRNLVPQTIFSMQLCH*RGAHQE
Trigger: CTCTTGGTGTGCTCCTCTGCAGTGGCACAGTTGCAT...AGAAAATATAGTTTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681444.1
CDS-3UTR GCA 90 bp TCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCGATGAGACGTCGTACTaGTTCTTCATTCTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: SQLNIASTSWVQGISCLSDETSY*FFILFL
Trigger: AAGGAAAAGAATGAAGAAGCAGTACGACGTCTCATC...GCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR GCA 90 bp CCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCTACTATGTGATATTTCTCTaGCACTGGCTGGGAACTCTC +
Preference number: 4 (lower is better)
Translates to: PFLWVPGEHLLHDSLMIYYVIFL*HWLGTL
Trigger: GAGAGTTCCCAGCCAGTGGCAGAGAAATATCACATA...GTAGATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000680664.1
CDS-3UTR GCA 90 bp GAGTACAGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGTCAGGACATCTTCTCTaGCATAAGGAAGTTCAGTGT +
Preference number: 4 (lower is better)
Translates to: EYSGVISAQHSLNLLGSRSGHLL*HKEVQC
Trigger: ACACTGAACTTCCTTATGGCAGAGAAGATGTCCTGA...CCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACTGTACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR GCA 90 bp GCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCTCAGGACATCTTCTCTaGCATAAGGAAGTTCAGTGT +
Preference number: 4 (lower is better)
Translates to: APFLWVPGEHLLHDSLMISGHLL*HKEVQC
Trigger: ACACTGAACTTCCTTATGGCAGAGAAGATGTCCTGA...GATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR GCA 90 bp AGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTTGGCTCAGTTATTTaGCAAATAAAGGCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: SGVISAQHSLNLLGSRNLVGSVI*QIKALV
Trigger: GACCAGGGCCTTTATTTGGCAAATAACTGAGCCAAC...GAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR GCA 90 bp ATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCTGAGGCAGAAGAATTaGTTGAACCTTAAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: ISAQHSLNLLGSRNLVPQLRQKN*LNLKGR
Trigger: TCTGCCTTTAAGGTTCAAGCAATTCTTCTGCCTCAG...CTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680931.1
CDS-3UTR CCA 90 bp GTAAGAGGGAAAGCTAGCAATCCCACAATGATTTCCTTTATTTCTTGCCATCCGTTCTCTGCCACTGGCTaGGAACTCTCAGGGAACTCA +
Preference number: 4 (lower is better)
Translates to: VRGKASNPTMISFISCHPFSATG*ELSGNS
Trigger: TGAGTTCCCTGAGAGTTCCCAGCCAGTGGCAGAGAA...CGGATGGCAAGAAATAAAGGAAATCATTGTGGGATTGCTAGCTTTCCCTCTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR CCA 90 bp GTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTGACATTTCTGATCCATaGCTTTGTAGGGATAGGAAG +
Preference number: 4 (lower is better)
Translates to: VISAQHSLNLLGSRNLVPDISDP*LCRDRK
Trigger: CTTCCTATCCCTACAAAGCCATGGATCAGAAATGTC...AGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000368985.8
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR CCA 90 bp AAGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTGACATTTCTGATCCATaGCTTTGTAGGGATAGGAAG +
Preference number: 4 (lower is better)
Translates to: KDAPFLWVPGEHLLHDSLDISDP*LCRDRK
Trigger: CTTCCTATCCCTACAAAGCCATGGATCAGAAATGTC...AAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp GCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCGACATTTCTGATCCATaGCTTTGTAGGGATAGGAAG +
Preference number: 4 (lower is better)
Translates to: APFLWVPGEHLLHDSLMIDISDP*LCRDRK
Trigger: CTTCCTATCCCTACAAAGCCATGGATCAGAAATGTC...GATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp GAGTACAGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGGACATTTCTGATCCATaGCTTTGTAGGGATAGGAAG +
Preference number: 4 (lower is better)
Translates to: EYSGVISAQHSLNLLGSRDISDP*LCRDRK
Trigger: CTTCCTATCCCTACAAAGCCATGGATCAGAAATGTC...CCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACTGTACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000368985.8
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR CCA 90 bp TCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCATTCTGAGTACAGGATaGTTCATAGTAGACACCACT +
Preference number: 4 (lower is better)
Translates to: SQLNIASTSWVQGISCLSILSTG*FIVDTT
Trigger: AGTGGTGTCTACTATGAACCATCCTGTACTCAGAAT...GCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR CCA 90 bp AGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCTCTTCACCAAAGTTGTaGCCCCAGCTGTTTTTCACA +
Preference number: 4 (lower is better)
Translates to: SGVISAQHSLNLLGSRNLSSPKL*PQLFFT
Trigger: TGTGAAAAACAGCTGGGGCCACAACTTTGGTGAAGA...GAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679898.1
ENST00000680288.1
ENST00000680471.1
ENST00000680664.1
ENST00000681444.1
CDS-3UTR CCA 90 bp CCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCTACGATCCTCTAGATTTCTaGGTAAGAGGGAAAGCTAGC +
Preference number: 4 (lower is better)
Translates to: PFLWVPGEHLLHDSLMIYDPLDF*VRGKAS
Trigger: GCTAGCTTTCCCTCTTACCCAGAAATCTAGAGGATC...GTAGATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp TCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAAACTGATCCTCTAGATTTCTaGGTAAGAGGGAAAGCTAGC +
Preference number: 4 (lower is better)
Translates to: SAQHSLNLLGSRNLVPQTDPLDF*VRGKAS
Trigger: GCTAGCTTTCCCTCTTACCCAGAAATCTAGAGGATC...AGTTTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681444.1
CDS-3UTR CCA 90 bp AAAAGGAGAGATCCTCTAGATTTCTGGGTAAGAGGGAAAGCTAGCAATCCCACATTGATATGCCTGCCTTaGCCTCCCAAGTACTGGGAT +
Preference number: 4 (lower is better)
Translates to: KRRDPLDFWVRGKASNPTLICLP*PPKYWD
Trigger: ATCCCAGTACTTGGGAGGCCAAGGCAGGCATATCAA...TGTGGGATTGCTAGCTTTCCCTCTTACCCAGAAATCTAGAGGATCTCTCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR CCA 90 bp AGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGAAACAGTTTGATATGCCTGCCTTaGCCTCCCAAGTACTGGGAT +
Preference number: 4 (lower is better)
Translates to: SFTRHEGLHKEIKAQRNSLICLP*PPKYWD
Trigger: ATCCCAGTACTTGGGAGGCCAAGGCAGGCATATCAA...ACTGTTTCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp AAAAGGAGAGATCCTCTAGATTTCTGGGTAAGAGGGAAAGCTAGCAATCCCACACAGGCTGGAGTACAGTaGTGTGATCTCAGCTCAACA +
Preference number: 4 (lower is better)
Translates to: KRRDPLDFWVRGKASNPTQAGVQ*CDLSST
Trigger: TGTTGAGCTGAGATCACACCACTGTACTCCAGCCTG...TGTGGGATTGCTAGCTTTCCCTCTTACCCAGAAATCTAGAGGATCTCTCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR CCA 90 bp CCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCACCTTGGTTATTTTATTCTaGTTGGCTCAGTTATTTGCC +
Preference number: 4 (lower is better)
Translates to: PGFMAASGENSRQKVRVTLVILF*LAQLFA
Trigger: GGCAAATAACTGAGCCAACCAGAATAAAATAACCAA...GGTGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp AGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGAATGCTCCAGGTTGTaGAGCATCACAAACTTTAGA +
Preference number: 4 (lower is better)
Translates to: SGVISAQHSLNLLGSRNLECSRL*SITNFR
Trigger: TCTAAAGTTTGTGATGCTTCACAACCTGGAGCATTC...GAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR TCA 90 bp AGTATTGGTTATTTTATTCTGGTTGGCTCAGTTATTTGCCAAATAAAGGCCCTGCCAGGTTCTGGGCACTaGGAGACACCAGCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: SIGYFILVGSVICQIKALPGSGH*ETPAFL
Trigger: CAGGAAAGCTGGTGTCTCTCAGTGCCCAGAACCTGG...CAGGGCCTTTATTTGGCAAATAACTGAGCCAACCAGAATAAAATAACCAATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp CCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCTACTCCATATTTTTCAGTTaGGCAATCCACCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: PFLWVPGEHLLHDSLMIYSIFFS*AIHQVL
Trigger: CAGAACCTGGTGGATTGCTCAACTGAAAAATATGGA...GTAGATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp GTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTGGCAGCACGATATTTTaGGTCATATTGACATTTCTG +
Preference number: 4 (lower is better)
Translates to: VISAQHSLNLLGSRNLVPGSTIF*VILTFL
Trigger: CAGAAATGTCAATATGACTCAAAATATCGTGCTGCC...AGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR TCA 90 bp GCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCGGCAGCACGATATTTTaGGTCATATTGACATTTCTG +
Preference number: 4 (lower is better)
Translates to: APFLWVPGEHLLHDSLMIGSTIF*VILTFL
Trigger: CAGAAATGTCAATATGACTCAAAATATCGTGCTGCC...GATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp GAGTACAGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGGGCAGCACGATATTTTaGGTCATATTGACATTTCTG +
Preference number: 4 (lower is better)
Translates to: EYSGVISAQHSLNLLGSRGSTIF*VILTFL
Trigger: CAGAAATGTCAATATGACTCAAAATATCGTGCTGCC...CCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACTGTACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR TCA 90 bp AGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGAAACAGTAGGAAGAAAGAAGGATaGCGCGCATCTACACCAACA +
Preference number: 4 (lower is better)
Translates to: SFTRHEGLHKEIKAQRNSRKKEG*RASTPT
Trigger: TGTTGGTGTAGATGCGCGTCATCCTTCTTTCTTCCT...ACTGTTTCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp GCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCCTAGCAATCCCACAATaGTTTCCTTTATTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: APFLWVPGEHLLHDSLMILAIPQ*FPLFLA
Trigger: GGCAAGAAATAAAGGAAATCATTGTGGGATTGCTAG...GATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp ATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCTAGCAATCCCACAATaGTTTCCTTTATTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: ISAQHSLNLLGSRNLVPQLAIPQ*FPLFLA
Trigger: GGCAAGAAATAAAGGAAATCATTGTGGGATTGCTAG...CTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR TCA 90 bp ATTCTGGTTGGCTCAGTTATTTGCCAAATAAAGGCCCTGGTCAAATTGTTGATGCCTCCTGGGCTCTTGTaGTCCTCCTGTCTTAGACAT +
Preference number: 4 (lower is better)
Translates to: ILVGSVICQIKALVKLLMPPGLL*SSCLRH
Trigger: ATGTCTAAGACAGGAGGATCACAAGAGCCCAGGAGG...CATCAACAATTTGACCAGGGCCTTTATTTGGCAAATAACTGAGCCAACCAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp ATTCTGGTTGGCTCAGTTATTTGCCAAATAAAGGCCCTGGTCAAATTGTTGATGGAAGTTGCAGTGAACTaGGATGGTGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: ILVGSVICQIKALVKLLMEVAVN*DGATAL
Trigger: GAGTGCAGTGGCACCATCTCAGTTCACTGCAACTTC...CATCAACAATTTGACCAGGGCCTTTATTTGGCAAATAACTGAGCCAACCAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp GGTAAGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTAATTATGTTAAAAACTaGAAAGTAGGCTGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: GKDAPFLWVPGEHLLHDSNYVKN*KVGWAQ
Trigger: CTGAGCCCAGCCTACTTTTCAGTTTTTAACATAATT...ACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCTTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp GCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCAGAGCACCTCTTACATaGCAGTCTTATGATCTACTT +
Preference number: 4 (lower is better)
Translates to: APFLWVPGEHLLHDSLMIRAPLT*QSYDLL
Trigger: AAGTAGATCATAAGACTGTCATGTAAGAGGTGCTCT...GATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp ATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGAGAGCACCTCTTACATaGCAGTCTTATGATCTACTT +
Preference number: 4 (lower is better)
Translates to: ISAQHSLNLLGSRNLVPQRAPLT*QSYDLL
Trigger: AAGTAGATCATAAGACTGTCATGTAAGAGGTGCTCT...CTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR GCA 90 bp TTCTGGGTAAGAGGGAAAGCTAGCAATCCCACAATGATTTCCTTTATTTCTTGCATGCAACTGTGCCACTaGAGAGGAGCACACCAAGAG +
Preference number: 4 (lower is better)
Translates to: FWVRGKASNPTMISFISCMQLCH*RGAHQE
Trigger: CTCTTGGTGTGCTCCTCTGCAGTGGCACAGTTGCAT...GCAAGAAATAAAGGAAATCATTGTGGGATTGCTAGCTTTCCCTCTTACCCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR GCA 90 bp AGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGAAACAGTAGGGTAGGATCTTTATaGAACTGTGCCACTGCAGAG +
Preference number: 4 (lower is better)
Translates to: SFTRHEGLHKEIKAQRNSRVGSL*NCATAE
Trigger: CTCTGCAGTGGCACAGTTGCATAAAGATCCTACCCT...ACTGTTTCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
CDS-3UTR GCA 90 bp AAGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTGATGAGACGTCGTACTaGTTCTTCATTCTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: KDAPFLWVPGEHLLHDSLDETSY*FFILFL
Trigger: AAGGAAAAGAATGAAGAAGCAGTACGACGTCTCATC...AAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000680288.1
CDS-3UTR GCA 90 bp ATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGGATGAGACGTCGTACTaGTTCTTCATTCTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: ISAQHSLNLLGSRNLVPQDETSY*FFILFL
Trigger: AAGGAAAAGAATGAAGAAGCAGTACGACGTCTCATC...CTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR GCA 90 bp CCCACAATGATTTCCTTTATTTCTTGCCATCCGAATATATCCTTCTTCACCAAATTTCAGCTTCAGCTGTaGTTCCAGGGCCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: PTMISFISCHPNISFFTKFQLQL*FQGPHS
Trigger: GCTGTGGGGGCCCTGGAAGCACAGCTGAAGCTGAAA...TTTGGTGAAGAAGGATATATTCGGATGGCAAGAAATAAAGGAAATCATTGTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000483930.2
ENST00000680471.1
ENST00000680931.1
CDS-3UTR GCA 90 bp AGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCTCAGGACATCTTCTCTaGCATAAGGAAGTTCAGTGT +
Preference number: 4 (lower is better)
Translates to: SGVISAQHSLNLLGSRNLSGHLL*HKEVQC
Trigger: ACACTGAACTTCCTTATGGCAGAGAAGATGTCCTGA...GAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR GCA 90 bp AATATAAGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGACCTGTCTTAGACATCTaGATAGCAGGGACCACAGGC +
Preference number: 4 (lower is better)
Translates to: NISFTRHEGLHKEIKAQRPVLDI*IAGTTG
Trigger: GCCTGTGGTCCCTGCTATGCAGATGTCTAAGACAGG...TCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACTTATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR GCA 90 bp GTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTAAAGTTCCTGCTGCCTaGTTAGATGCATCTACTAAT +
Preference number: 4 (lower is better)
Translates to: VISAQHSLNLLGSRNLVPKVPAA*LDASTN
Trigger: ATTAGTAGATGCATCTAAGCAGGCAGCAGGAACTTT...AGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR GCA 90 bp ATTCTGGTTGGCTCAGTTATTTGCCAAATAAAGGCCCTGGTCAAATTGTTGATGCTCCTTTTCTCTGGGTaGCAGGAGAGCACCTCTTAC +
Preference number: 4 (lower is better)
Translates to: ILVGSVICQIKALVKLLMLLFSG*QESTSY
Trigger: GTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAG...CATCAACAATTTGACCAGGGCCTTTATTTGGCAAATAACTGAGCCAACCAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR GCA 90 bp GCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCGATGAGACGTCGTACTaGTTCTTCATTGTGATAGAA +
Preference number: 4 (lower is better)
Translates to: APFLWVPGEHLLHDSLMIDETSY*FFIVIE
Trigger: TTCTATCACAATGAAGAAGCAGTACGACGTCTCATC...GATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680664.1
CDS-3UTR CCA 90 bp AATATAAGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGATTCTCTGCCACTGGCTaGGAACTCTCAGGGAACTCA +
Preference number: 4 (lower is better)
Translates to: NISFTRHEGLHKEIKAQRFSATG*ELSGNS
Trigger: TGAGTTCCCTGAGAGTTCCCAGCCAGTGGCAGAGAA...TCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACTTATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000680664.1
CDS-3UTR CCA 90 bp AGAGGGAAAGCTAGCAATCCCACAATGATTTCCTTTATTTCTTGCCATCCGAATTTCTCTGCCACTGGCTaGGAACTCTCAGGGAACTCA +
Preference number: 4 (lower is better)
Translates to: RGKASNPTMISFISCHPNFSATG*ELSGNS
Trigger: TGAGTTCCCTGAGAGTTCCCAGCCAGTGGCAGAGAA...ATTCGGATGGCAAGAAATAAAGGAAATCATTGTGGGATTGCTAGCTTTCCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR CCA 90 bp ATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGATTCTGAGTACAGGATaGTTCATAGTAGACACCACT +
Preference number: 4 (lower is better)
Translates to: ISAQHSLNLLGSRNLVPQILSTG*FIVDTT
Trigger: AGTGGTGTCTACTATGAACCATCCTGTACTCAGAAT...CTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR CCA 90 bp GTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTATTCTGAGTACAGGATaGTTCATAGTAGACACCACT +
Preference number: 4 (lower is better)
Translates to: VISAQHSLNLLGSRNLVPILSTG*FIVDTT
Trigger: AGTGGTGTCTACTATGAACCATCCTGTACTCAGAAT...AGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR CCA 90 bp GTAAGAGGGAAAGCTAGCAATCCCACAATGATTTCCTTTATTTCTTGCCATCCGTTGATATGCCTGCCTTaGCCTCCCAAGTACTGGGAT +
Preference number: 4 (lower is better)
Translates to: VRGKASNPTMISFISCHPLICLP*PPKYWD
Trigger: ATCCCAGTACTTGGGAGGCCAAGGCAGGCATATCAA...CGGATGGCAAGAAATAAAGGAAATCATTGTGGGATTGCTAGCTTTCCCTCTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR CCA 90 bp AATATAAGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGACTGGTCTTGAACTCCTaGGCTCAAGACGATCCTCCT +
Preference number: 4 (lower is better)
Translates to: NISFTRHEGLHKEIKAQRLVLNS*AQDDPP
Trigger: AGGAGGATCGTCTTGAGCCCAGGAGTTCAAGACCAG...TCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACTTATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp ATTCTGGTTGGCTCAGTTATTTGCCAAATAAAGGCCCTGGTCAAATTGTTGATGGTAATCTTAGCACTTTaGGAGGCTGGGGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: ILVGSVICQIKALVKLLMVILAL*EAGVGG
Trigger: TCCACCCACCCCAGCCTCCCAAAGTGCTAAGATTAC...CATCAACAATTTGACCAGGGCCTTTATTTGGCAAATAACTGAGCCAACCAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp AGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGAAACAGTGATTCTTTTCCCAGATaGGACGTCGTACTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SFTRHEGLHKEIKAQRNSDSFPR*DVVLLL
Trigger: AAGAAGCAGTACGACGTCTCATCTGGGAAAAGAATC...ACTGTTTCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp AAAAGGAGAGATCCTCTAGATTTCTGGGTAAGAGGGAAAGCTAGCAATCCCACATGCCCTTGTTATCAATaGTGTACTGGAAAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: KRRDPLDFWVRGKASNPTCPCYQ*CTGKPL
Trigger: CAACGGCTTTCCAGTACATCATTGATAACAAGGGCA...TGTGGGATTGCTAGCTTTCCCTCTTACCCAGAAATCTAGAGGATCTCTCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR TCA 90 bp GCTAGCAATCCCACAATGATTTCCTTTATTTCTTGCCATCCGAATATATCCTTCGGGATAGGAAGCGTCTaGGTCGATGCCCTTGTTATC +
Preference number: 4 (lower is better)
Translates to: ASNPTMISFISCHPNISFGIGSV*VDALVI
Trigger: GATAACAAGGGCATCGACTCAGACGCTTCCTATCCC...GAAGGATATATTCGGATGGCAAGAAATAAAGGAAATCATTGTGGGATTGCTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR TCA 90 bp AGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGGCAGCACGATATTTTaGGTCATATTGACATTTCTG +
Preference number: 4 (lower is better)
Translates to: SGVISAQHSLNLLGSRNLGSTIF*VILTFL
Trigger: CAGAAATGTCAATATGACTCAAAATATCGTGCTGCC...GAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR TCA 90 bp TCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAAACTGGCAGCACGATATTTTaGGTCATATTGACATTTCTG +
Preference number: 4 (lower is better)
Translates to: SAQHSLNLLGSRNLVPQTGSTIF*VILTFL
Trigger: CAGAAATGTCAATATGACTCAAAATATCGTGCTGCC...AGTTTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681444.1
CDS-3UTR TCA 90 bp AGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCCTAGCAATCCCACAATaGTTTCCTTTATTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: SGVISAQHSLNLLGSRNLLAIPQ*FPLFLA
Trigger: GGCAAGAAATAAAGGAAATCATTGTGGGATTGCTAG...GAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR TCA 90 bp CCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCTACCTAGCAATCCCACAATaGTTTCCTTTATTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: PFLWVPGEHLLHDSLMIYLAIPQ*FPLFLA
Trigger: GGCAAGAAATAAAGGAAATCATTGTGGGATTGCTAG...GTAGATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp AAATTTAAAGTTCCTGCTGCCTGCTTAGATGCATCTACTAATCTAGAGCAGTTGCCTCCTGGGCTCTTGTaGTCCTCCTGTCTTAGACAT +
Preference number: 4 (lower is better)
Translates to: KFKVPAACLDASTNLEQLPPGLL*SSCLRH
Trigger: ATGTCTAAGACAGGAGGATCACAAGAGCCCAGGAGG...CAACTGCTCTAGATTAGTAGATGCATCTAAGCAGGCAGCAGGAACTTTAAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp AAATTTAAAGTTCCTGCTGCCTGCTTAGATGCATCTACTAATCTAGAGCAGTTGAGGCAGAAGTTGCAGTaGACTGAGATGGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: KFKVPAACLDASTNLEQLRQKLQ*TEMVPL
Trigger: CAGTGGCACCATCTCAGTTCACTGCAACTTCTGCCT...CAACTGCTCTAGATTAGTAGATGCATCTAAGCAGGCAGCAGGAACTTTAAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp GATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGAATTATGTTAAAAACTaGAAAGTAGGCTGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: DAPFLWVPGEHLLHDSLMNYVKN*KVGWAQ
Trigger: CTGAGCCCAGCCTACTTTTCAGTTTTTAACATAATT...CATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp AGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTAAATTATGTTAAAAACTaGAAAGTAGGCTGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: RMLLFSGCQESTSYMTVLNYVKN*KVGWAQ
Trigger: CTGAGCCCAGCCTACTTTTCAGTTTTTAACATAATT...TAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp CCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCTACAGAGCACCTCTTACATaGCAGTCTTATGATCTACTT +
Preference number: 4 (lower is better)
Translates to: PFLWVPGEHLLHDSLMIYRAPLT*QSYDLL
Trigger: AAGTAGATCATAAGACTGTCATGTAAGAGGTGCTCT...GTAGATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp TTTGTTATAAAAAGGAGAGATCCTCTAGATTTCTGGGTAAGAGGGAAAGCTAGCTGCACTCTAGCCTGGTaGCAGAGTGAGACTCCATCT +
Preference number: 4 (lower is better)
Translates to: FVIKRRDPLDFWVRGKASCTLAW*QSETPS
Trigger: AGATGGAGTCTCACTCTGTCACCAGGCTAGAGTGCA...GCTAGCTTTCCCTCTTACCCAGAAATCTAGAGGATCTCTCCTTTTTATAACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680931.1
CDS-3UTR GCA 90 bp GTTATAAAAAGGAGAGATCCTCTAGATTTCTGGGTAAGAGGGAAAGCTAGCAATATGCAACTGTGCCACTaGAGAGGAGCACACCAAGAG +
Preference number: 4 (lower is better)
Translates to: VIKRRDPLDFWVRGKASNMQLCH*RGAHQE
Trigger: CTCTTGGTGTGCTCCTCTGCAGTGGCACAGTTGCAT...ATTGCTAGCTTTCCCTCTTACCCAGAAATCTAGAGGATCTCTCCTTTTTATAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR GCA 90 bp GCTAGCAATCCCACAATGATTTCCTTTATTTCTTGCCATCCGAATATATCCTTCATGCAACTGTGCCACTaGAGAGGAGCACACCAAGAG +
Preference number: 4 (lower is better)
Translates to: ASNPTMISFISCHPNISFMQLCH*RGAHQE
Trigger: CTCTTGGTGTGCTCCTCTGCAGTGGCACAGTTGCAT...GAAGGATATATTCGGATGGCAAGAAATAAAGGAAATCATTGTGGGATTGCTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR GCA 90 bp AGAGATCCTCTAGATTTCTGGGTAAGAGGGAAAGCTAGCAATCCCACAATGATTATCTTTATGCAACTGTaGCACTGCAGAGGAGCACAC +
Preference number: 4 (lower is better)
Translates to: RDPLDFWVRGKASNPTMIIFMQL*HCRGAH
Trigger: GTGTGCTCCTCTGCAGTGGCACAGTTGCATAAAGAT...AATCATTGTGGGATTGCTAGCTTTCCCTCTTACCCAGAAATCTAGAGGATCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR GCA 90 bp AGAGATCCTCTAGATTTCTGGGTAAGAGGGAAAGCTAGCAATCCCACAATGATTAGGGTAGGATCTTTATaGAACTGTGCCACTGCAGAG +
Preference number: 4 (lower is better)
Translates to: RDPLDFWVRGKASNPTMIRVGSL*NCATAE
Trigger: CTCTGCAGTGGCACAGTTGCATAAAGATCCTACCCT...AATCATTGTGGGATTGCTAGCTTTCCCTCTTACCCAGAAATCTAGAGGATCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR GCA 90 bp AGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGATGAGACGTCGTACTaGTTCTTCATTCTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: SGVISAQHSLNLLGSRNLDETSY*FFILFL
Trigger: AAGGAAAAGAATGAAGAAGCAGTACGACGTCTCATC...GAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR GCA 90 bp AGAGATCCTCTAGATTTCTGGGTAAGAGGGAAAGCTAGCAATCCCACAATGATTCCCAGATCGTATGAGTaGATTCCCATTGAATGCTCC +
Preference number: 4 (lower is better)
Translates to: RDPLDFWVRGKASNPTMIPRSYE*IPIECS
Trigger: GGAGCATTCAATGGGAATGCACTCATACGATCTGGG...AATCATTGTGGGATTGCTAGCTTTCCCTCTTACCCAGAAATCTAGAGGATCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR GCA 90 bp AAATTTAAAGTTCCTGCTGCCTGCTTAGATGCATCTACTAATCTAGAGCAGTTGCCTGTCTTAGACATCTaGATAGCAGGGACCACAGGC +
Preference number: 4 (lower is better)
Translates to: KFKVPAACLDASTNLEQLPVLDI*IAGTTG
Trigger: GCCTGTGGTCCCTGCTATGCAGATGTCTAAGACAGG...CAACTGCTCTAGATTAGTAGATGCATCTAAGCAGGCAGCAGGAACTTTAAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR GCA 90 bp AAATTTAAAGTTCCTGCTGCCTGCTTAGATGCATCTACTAATCTAGAGCAGTTGCCCAGGTTTTATGGCTaGTTCTGGGGAGAACAGCAG +
Preference number: 4 (lower is better)
Translates to: KFKVPAACLDASTNLEQLPRFYG*FWGEQQ
Trigger: CTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGGG...CAACTGCTCTAGATTAGTAGATGCATCTAAGCAGGCAGCAGGAACTTTAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp AGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATTATCAATGATGTACTaGAAAGCCGTTGTCATGAAG +
Preference number: 4 (lower is better)
Translates to: RMLLFSGCQESTSYMTVLLSMMY*KAVVMK
Trigger: CTTCATGACAACGGCTTTCCAGTACATCATTGATAA...TAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp GTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTTTATCAATGATGTACTaGAAAGCCGTTGTCATGAAG +
Preference number: 4 (lower is better)
Translates to: VISAQHSLNLLGSRNLVPLSMMY*KAVVMK
Trigger: CTTCATGACAACGGCTTTCCAGTACATCATTGATAA...AGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR CCA 90 bp GAGTACAGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGTTATCAATGATGTACTaGAAAGCCGTTGTCATGAAG +
Preference number: 4 (lower is better)
Translates to: EYSGVISAQHSLNLLGSRLSMMY*KAVVMK
Trigger: CTTCATGACAACGGCTTTCCAGTACATCATTGATAA...CCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACTGTACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR CCA 90 bp ATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGTTATCAATGATGTACTaGAAAGCCGTTGTCATGAAG +
Preference number: 4 (lower is better)
Translates to: ISAQHSLNLLGSRNLVPQLSMMY*KAVVMK
Trigger: CTTCATGACAACGGCTTTCCAGTACATCATTGATAA...CTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR CCA 90 bp GATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGTGTACTTTGAACATGTaGCAGCACGATATTTTGAGT +
Preference number: 4 (lower is better)
Translates to: DAPFLWVPGEHLLHDSLMCTLNM*QHDILS
Trigger: ACTCAAAATATCGTGCTGCCACATGTTCAAAGTACA...CATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp AAGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTTGTACTTTGAACATGTaGCAGCACGATATTTTGAGT +
Preference number: 4 (lower is better)
Translates to: KDAPFLWVPGEHLLHDSLCTLNM*QHDILS
Trigger: ACTCAAAATATCGTGCTGCCACATGTTCAAAGTACA...AAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp AGAGGGAAAGCTAGCAATCCCACAATGATTTCCTTTATTTCTTGCCATCCGAATCAGGCTGGAGTACAGTaGTGTGATCTCAGCTCAACA +
Preference number: 4 (lower is better)
Translates to: RGKASNPTMISFISCHPNQAGVQ*CDLSST
Trigger: TGTTGAGCTGAGATCACACCACTGTACTCCAGCCTG...ATTCGGATGGCAAGAAATAAAGGAAATCATTGTGGGATTGCTAGCTTTCCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR CCA 90 bp AAATTTAAAGTTCCTGCTGCCTGCTTAGATGCATCTACTAATCTAGAGCAGTTGGTAATCTTAGCACTTTaGGAGGCTGGGGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: KFKVPAACLDASTNLEQLVILAL*EAGVGG
Trigger: TCCACCCACCCCAGCCTCCCAAAGTGCTAAGATTAC...CAACTGCTCTAGATTAGTAGATGCATCTAAGCAGGCAGCAGGAACTTTAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp AGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCATTCTGAGTACAGGATaGTTCATAGTAGACACCTGT +
Preference number: 4 (lower is better)
Translates to: SGVISAQHSLNLLGSRNLILSTG*FIVDTC
Trigger: ACAGGTGTCTACTATGAACCATCCTGTACTCAGAAT...GAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483930.2
3UTR CAA 72 bp AGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTaGGGTTCAAGGAATCTCGTGCCTCAAACTATATTT +
Preference number: 4 (lower is better)
Translates to: SGVISAQHSLNL*GSRNLVPQTIF
Trigger: AAATATAGTTTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681444.1
CDS-3UTR TCA 90 bp AGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGAAACAGTGAATGCTCCAGGTTGTaGAGCATCACAAACTTTAGA +
Preference number: 4 (lower is better)
Translates to: SFTRHEGLHKEIKAQRNSECSRL*SITNFR
Trigger: TCTAAAGTTTGTGATGCTTCACAACCTGGAGCATTC...ACTGTTTCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp AAAAGGAGAGATCCTCTAGATTTCTGGGTAAGAGGGAAAGCTAGCAATCCCACAGGTTTGACTTATATGTaGTATTTCTCTGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: KRRDPLDFWVRGKASNPTGLTYM*YFSATG
Trigger: GCCAGTGGCAGAGAAATATCACATATAAGTCAAACC...TGTGGGATTGCTAGCTTTCCCTCTTACCCAGAAATCTAGAGGATCTCTCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR GCA 90 bp AGAGGGAAAGCTAGCAATCCCACAATGATTTCCTTTATTTCTTGCCATCCGAATGATAGAACCAGCAGTTaGTCCCACAGTAAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: RGKASNPTMISFISCHPNDRTSS*SHSKSP
Trigger: AGGACTCTTACTGTGGGAGCAACTGCTGGTTCTATC...ATTCGGATGGCAAGAAATAAAGGAAATCATTGTGGGATTGCTAGCTTTCCCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680931.1
CDS-3UTR GCA 90 bp ATTCTGGTTGGCTCAGTTATTTGCCAAATAAAGGCCCTGGTCAAATTGTTGATGATCTTTATGCAACTGTaGCACTGCAGAGGAGCACAC +
Preference number: 4 (lower is better)
Translates to: ILVGSVICQIKALVKLLMIFMQL*HCRGAH
Trigger: GTGTGCTCCTCTGCAGTGGCACAGTTGCATAAAGAT...CATCAACAATTTGACCAGGGCCTTTATTTGGCAAATAACTGAGCCAACCAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
CDS-3UTR GCA 90 bp TTCTGGGTAAGAGGGAAAGCTAGCAATCCCACAATGATTTCCTTTATTTCTTGCATCTTTATGCAACTGTaGCACTGCAGAGGAGCACAC +
Preference number: 4 (lower is better)
Translates to: FWVRGKASNPTMISFISCIFMQL*HCRGAH
Trigger: GTGTGCTCCTCTGCAGTGGCACAGTTGCATAAAGAT...GCAAGAAATAAAGGAAATCATTGTGGGATTGCTAGCTTTCCCTCTTACCCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR GCA 90 bp GTTTTTCACAAGCCAGTATTCTTTCCCATTAAGATCACCATAGCCAACCACAAGAGGGTAGGATCTTTATaGAACTGTGCCACTGCAGAG +
Preference number: 4 (lower is better)
Translates to: VFHKPVFFPIKITIANHKRVGSL*NCATAE
Trigger: CTCTGCAGTGGCACAGTTGCATAAAGATCCTACCCT...CTTGTGGTTGGCTATGGTGATCTTAATGGGAAAGAATACTGGCTTGTGAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000483930.2
ENST00000680471.1
CDS-3UTR GCA 90 bp AGAGGGAAAGCTAGCAATCCCACAATGATTTCCTTTATTTCTTGCCATCCGAATAGGGTAGGATCTTTATaGAACTGTGCCACTGCAGAG +
Preference number: 4 (lower is better)
Translates to: RGKASNPTMISFISCHPNRVGSL*NCATAE
Trigger: CTCTGCAGTGGCACAGTTGCATAAAGATCCTACCCT...ATTCGGATGGCAAGAAATAAAGGAAATCATTGTGGGATTGCTAGCTTTCCCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR GCA 90 bp AATATAAGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGACCCAGATCGTATGAGTaGATTCCCATTGAATGCTCC +
Preference number: 4 (lower is better)
Translates to: NISFTRHEGLHKEIKAQRPRSYE*IPIECS
Trigger: GGAGCATTCAATGGGAATGCACTCATACGATCTGGG...TCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACTTATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR GCA 90 bp AGAGGGAAAGCTAGCAATCCCACAATGATTTCCTTTATTTCTTGCCATCCGAATCCCAGATCGTATGAGTaGATTCCCATTGAATGCTCC +
Preference number: 4 (lower is better)
Translates to: RGKASNPTMISFISCHPNPRSYE*IPIECS
Trigger: GGAGCATTCAATGGGAATGCACTCATACGATCTGGG...ATTCGGATGGCAAGAAATAAAGGAAATCATTGTGGGATTGCTAGCTTTCCCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR GCA 90 bp CATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAAACTATATTTTCTTATGTGATATTTCTCTaGCACTGGCTGGGAACTCTC +
Preference number: 4 (lower is better)
Translates to: HSLNLLGSRNLVPQTIFSYVIFL*HWLGTL
Trigger: GAGAGTTCCCAGCCAGTGGCAGAGAAATATCACATA...AGAAAATATAGTTTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681444.1
CDS-3UTR GCA 90 bp AGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGAAACAGTTCAGGACATCTTCTCTaGCATAAGGAAGTTCAGTGT +
Preference number: 4 (lower is better)
Translates to: SFTRHEGLHKEIKAQRNSSGHLL*HKEVQC
Trigger: ACACTGAACTTCCTTATGGCAGAGAAGATGTCCTGA...ACTGTTTCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR GCA 90 bp AAAAGGAGAGATCCTCTAGATTTCTGGGTAAGAGGGAAAGCTAGCAATCCCACATCAGGACATCTTCTCTaGCATAAGGAAGTTCAGTGT +
Preference number: 4 (lower is better)
Translates to: KRRDPLDFWVRGKASNPTSGHLL*HKEVQC
Trigger: ACACTGAACTTCCTTATGGCAGAGAAGATGTCCTGA...TGTGGGATTGCTAGCTTTCCCTCTTACCCAGAAATCTAGAGGATCTCTCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483930.2
ENST00000680931.1
CDS-3UTR CCA 90 bp GTTATAAAAAGGAGAGATCCTCTAGATTTCTGGGTAAGAGGGAAAGCTAGCAATGTCATGTCTCCCAGGTaGTTCATGCCCAGATCGTAT +
Preference number: 4 (lower is better)
Translates to: VIKRRDPLDFWVRGKASNVMSPR*FMPRSY
Trigger: ATACGATCTGGGCATGAACCACCTGGGAGACATGAC...ATTGCTAGCTTTCCCTCTTACCCAGAAATCTAGAGGATCTCTCCTTTTTATAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR CCA 90 bp AGTATTGGTTATTTTATTCTGGTTGGCTCAGTTATTTGCCAAATAAAGGCCCTGTTCTCTGCCACTGGCTaGGAACTCTCAGGGAACTCA +
Preference number: 4 (lower is better)
Translates to: SIGYFILVGSVICQIKALFSATG*ELSGNS
Trigger: TGAGTTCCCTGAGAGTTCCCAGCCAGTGGCAGAGAA...CAGGGCCTTTATTTGGCAAATAACTGAGCCAACCAGAATAAAATAACCAATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000680664.1
CDS-3UTR CCA 90 bp AGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCTTATCAATGATGTACTaGAAAGCCGTTGTCATGAAG +
Preference number: 4 (lower is better)
Translates to: SGVISAQHSLNLLGSRNLLSMMY*KAVVMK
Trigger: CTTCATGACAACGGCTTTCCAGTACATCATTGATAA...GAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR CCA 90 bp AGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGAAACAGTGACATTTCTGATCCATaGCTTTGTAGGGATAGGAAG +
Preference number: 4 (lower is better)
Translates to: SFTRHEGLHKEIKAQRNSDISDP*LCRDRK
Trigger: CTTCCTATCCCTACAAAGCCATGGATCAGAAATGTC...ACTGTTTCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp CCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCTACTGTACTTTGAACATGTaGCAGCACGATATTTTGAGT +
Preference number: 4 (lower is better)
Translates to: PFLWVPGEHLLHDSLMIYCTLNM*QHDILS
Trigger: ACTCAAAATATCGTGCTGCCACATGTTCAAAGTACA...GTAGATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp AGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCTGTACTTTGAACATGTaGCAGCACGATATTTTGAGT +
Preference number: 4 (lower is better)
Translates to: SGVISAQHSLNLLGSRNLCTLNM*QHDILS
Trigger: ACTCAAAATATCGTGCTGCCACATGTTCAAAGTACA...GAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR CCA 90 bp AATATAAGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGAACACTGGGCCTTTATTaGCCACAGCTTCTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: NISFTRHEGLHKEIKAQRTLGLY*PQLLSG
Trigger: TCCTGAAAGAAGCTGTGGCCAATAAAGGCCCAGTGT...TCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACTTATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp CATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAAACTATATTTTCTTCTTCACCAAAGTTGTaGCCCCAGCTGTTTTTCACA +
Preference number: 4 (lower is better)
Translates to: HSLNLLGSRNLVPQTIFSSSPKL*PQLFFT
Trigger: TGTGAAAAACAGCTGGGGCCACAACTTTGGTGAAGA...AGAAAATATAGTTTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000681444.1
CDS-3UTR CCA 90 bp GTAAGAGGGAAAGCTAGCAATCCCACAATGATTTCCTTTATTTCTTGCCATCCGGATCCTCTAGATTTCTaGGTAAGAGGGAAAGCTAGC +
Preference number: 4 (lower is better)
Translates to: VRGKASNPTMISFISCHPDPLDF*VRGKAS
Trigger: GCTAGCTTTCCCTCTTACCCAGAAATCTAGAGGATC...CGGATGGCAAGAAATAAAGGAAATCATTGTGGGATTGCTAGCTTTCCCTCTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR CCA 90 bp GCTAGCAATCCCACAATGATTTCCTTTATTTCTTGCCATCCGAATATATCCTTCCAGGCTGGAGTACAGTaGTGTGATCTCAGCTCAACA +
Preference number: 4 (lower is better)
Translates to: ASNPTMISFISCHPNISFQAGVQ*CDLSST
Trigger: TGTTGAGCTGAGATCACACCACTGTACTCCAGCCTG...GAAGGATATATTCGGATGGCAAGAAATAAAGGAAATCATTGTGGGATTGCTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR CCA 90 bp AGTATTGGTTATTTTATTCTGGTTGGCTCAGTTATTTGCCAAATAAAGGCCCTGCTGGTCTTGAACTCCTaGGCTCAAGACGATCCTCCT +
Preference number: 4 (lower is better)
Translates to: SIGYFILVGSVICQIKALLVLNS*AQDDPP
Trigger: AGGAGGATCGTCTTGAGCCCAGGAGTTCAAGACCAG...CAGGGCCTTTATTTGGCAAATAACTGAGCCAACCAGAATAAAATAACCAATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp GTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTTTGGTTATTTTATTCTaGTTGGCTCAGTTATTTGCC +
Preference number: 4 (lower is better)
Translates to: VISAQHSLNLLGSRNLVPLVILF*LAQLFA
Trigger: GGCAAATAACTGAGCCAACCAGAATAAAATAACCAA...AGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp ATTCTGGTTGGCTCAGTTATTTGCCAAATAAAGGCCCTGGTCAAATTGTTGATGAGTTTGAGACCAGCCTaGCTAATGTGGCAAAACCCT +
Preference number: 4 (lower is better)
Translates to: ILVGSVICQIKALVKLLMSLRPA*LMWQNP
Trigger: AGGGTTTTGCCACATTAGCCAGGCTGGTCTCAAACT...CATCAACAATTTGACCAGGGCCTTTATTTGGCAAATAACTGAGCCAACCAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp GTTTTTCACAAGCCAGTATTCTTTCCCATTAAGATCACCATAGCCAACCACAAGCACAGTAAGAGTCCTTaGATTAGTGGGCTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: VFHKPVFFPIKITIANHKHSKSP*ISGLSS
Trigger: AGAAGAGAGCCCACTAATTCAAGGACTCTTACTGTG...CTTGTGGTTGGCTATGGTGATCTTAATGGGAAAGAATACTGGCTTGTGAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483930.2
CDS-3UTR TCA 90 bp AGAGATCCTCTAGATTTCTGGGTAAGAGGGAAAGCTAGCAATCCCACAATGATTGGTTTGACTTATATGTaGTATTTCTCTGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: RDPLDFWVRGKASNPTMIGLTYM*YFSATG
Trigger: GCCAGTGGCAGAGAAATATCACATATAAGTCAAACC...AATCATTGTGGGATTGCTAGCTTTCCCTCTTACCCAGAAATCTAGAGGATCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR TCA 90 bp TTCTGGGTAAGAGGGAAAGCTAGCAATCCCACAATGATTTCCTTTATTTCTTGCTGCCCTTGTTATCAATaGTGTACTGGAAAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: FWVRGKASNPTMISFISCCPCYQ*CTGKPL
Trigger: CAACGGCTTTCCAGTACATCATTGATAACAAGGGCA...GCAAGAAATAAAGGAAATCATTGTGGGATTGCTAGCTTTCCCTCTTACCCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR TCA 90 bp AATATAAGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGATGCCCTTGTTATCAATaGTGTACTGGAAAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: NISFTRHEGLHKEIKAQRCPCYQ*CTGKPL
Trigger: CAACGGCTTTCCAGTACATCATTGATAACAAGGGCA...TCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACTTATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp AAAAGGAGAGATCCTCTAGATTTCTGGGTAAGAGGGAAAGCTAGCAATCCCACAGGCAGCACGATATTTTaGGTCATATTGACATTTCTG +
Preference number: 4 (lower is better)
Translates to: KRRDPLDFWVRGKASNPTGSTIF*VILTFL
Trigger: CAGAAATGTCAATATGACTCAAAATATCGTGCTGCC...TGTGGGATTGCTAGCTTTCCCTCTTACCCAGAAATCTAGAGGATCTCTCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483930.2
ENST00000680931.1
CDS-3UTR TCA 90 bp AGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGAAACAGTCTAGCAATCCCACAATaGTTTCCTTTATTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: SFTRHEGLHKEIKAQRNSLAIPQ*FPLFLA
Trigger: GGCAAGAAATAAAGGAAATCATTGTGGGATTGCTAG...ACTGTTTCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp AAAAGGAGAGATCCTCTAGATTTCTGGGTAAGAGGGAAAGCTAGCAATCCCACACTAGCAATCCCACAATaGTTTCCTTTATTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: KRRDPLDFWVRGKASNPTLAIPQ*FPLFLA
Trigger: GGCAAGAAATAAAGGAAATCATTGTGGGATTGCTAG...TGTGGGATTGCTAGCTTTCCCTCTTACCCAGAAATCTAGAGGATCTCTCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR TCA 90 bp ATTCTGGTTGGCTCAGTTATTTGCCAAATAAAGGCCCTGGTCAAATTGTTGATGATGAAGAGCAGCCAGTaGTGTAGAAATGTCATAGGG +
Preference number: 4 (lower is better)
Translates to: ILVGSVICQIKALVKLLMMKSSQ*CRNVIG
Trigger: CCCTATGACATTTCTACATCACTGGCTGCTCTTCAT...CATCAACAATTTGACCAGGGCCTTTATTTGGCAAATAACTGAGCCAACCAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR GCA 90 bp AAATTTAAAGTTCCTGCTGCCTGCTTAGATGCATCTACTAATCTAGAGCAGTTGATCTTTATGCAACTGTaGCACTGCAGAGGAGCACAC +
Preference number: 4 (lower is better)
Translates to: KFKVPAACLDASTNLEQLIFMQL*HCRGAH
Trigger: GTGTGCTCCTCTGCAGTGGCACAGTTGCATAAAGAT...CAACTGCTCTAGATTAGTAGATGCATCTAAGCAGGCAGCAGGAACTTTAAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
CDS-3UTR GCA 90 bp AAATTTAAAGTTCCTGCTGCCTGCTTAGATGCATCTACTAATCTAGAGCAGTTGCAATTACAAGCTCACTaGATTCTCAACCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: KFKVPAACLDASTNLEQLQLQAH*ILNLLG
Trigger: GCCCAGGAGGTTGAGAATGCAGTGAGCTTGTAATTG...CAACTGCTCTAGATTAGTAGATGCATCTAAGCAGGCAGCAGGAACTTTAAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR GCA 90 bp AATATAAGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGAGTTGGCTCAGTTATTTaGCAAATAAAGGCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: NISFTRHEGLHKEIKAQRVGSVI*QIKALV
Trigger: GACCAGGGCCTTTATTTGGCAAATAACTGAGCCAAC...TCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACTTATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp AAATTTAAAGTTCCTGCTGCCTGCTTAGATGCATCTACTAATCTAGAGCAGTTGACACTGGGCCTTTATTaGCCACAGCTTCTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: KFKVPAACLDASTNLEQLTLGLY*PQLLSG
Trigger: TCCTGAAAGAAGCTGTGGCCAATAAAGGCCCAGTGT...CAACTGCTCTAGATTAGTAGATGCATCTAAGCAGGCAGCAGGAACTTTAAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp AGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGAAACAGTATTCTGAGTACAGGATaGTTCATAGTAGACACCACT +
Preference number: 4 (lower is better)
Translates to: SFTRHEGLHKEIKAQRNSILSTG*FIVDTT
Trigger: AGTGGTGTCTACTATGAACCATCCTGTACTCAGAAT...ACTGTTTCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp GTTTTTCACAAGCCAGTATTCTTTCCCATTAAGATCACCATAGCCAACCACAAGTCTTCACCAAAGTTGTaGCCCCAGCTGTTTTTCACA +
Preference number: 4 (lower is better)
Translates to: VFHKPVFFPIKITIANHKSSPKL*PQLFFT
Trigger: TGTGAAAAACAGCTGGGGCCACAACTTTGGTGAAGA...CTTGTGGTTGGCTATGGTGATCTTAATGGGAAAGAATACTGGCTTGTGAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000483930.2
ENST00000680471.1
CDS-3UTR CCA 90 bp AATATAAGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGAGATCCTCTAGATTTCTaGGTAAGAGGGAAAGCTAGC +
Preference number: 4 (lower is better)
Translates to: NISFTRHEGLHKEIKAQRDPLDF*VRGKAS
Trigger: GCTAGCTTTCCCTCTTACCCAGAAATCTAGAGGATC...TCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACTTATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp CCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCTACTTGGTTATTTTATTCTaGTTGGCTCAGTTATTTGCC +
Preference number: 4 (lower is better)
Translates to: PFLWVPGEHLLHDSLMIYLVILF*LAQLFA
Trigger: GGCAAATAACTGAGCCAACCAGAATAAAATAACCAA...GTAGATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp TTTGTTATAAAAAGGAGAGATCCTCTAGATTTCTGGGTAAGAGGGAAAGCTAGCTCTTCACCAAAGTTGTaGCCCCAGCATGGCTTTGTA +
Preference number: 4 (lower is better)
Translates to: FVIKRRDPLDFWVRGKASSSPKL*PQHGFV
Trigger: TACAAAGCCATGCTGGGGCCACAACTTTGGTGAAGA...GCTAGCTTTCCCTCTTACCCAGAAATCTAGAGGATCTCTCCTTTTTATAACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680311.1
CDS-3UTR TCA 90 bp GCTAGCAATCCCACAATGATTTCCTTTATTTCTTGCCATCCGAATATATCCTTCGATTCTTTTCCCAGATaGGACGTCGTACTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: ASNPTMISFISCHPNISFDSFPR*DVVLLL
Trigger: AAGAAGCAGTACGACGTCTCATCTGGGAAAAGAATC...GAAGGATATATTCGGATGGCAAGAAATAAAGGAAATCATTGTGGGATTGCTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR TCA 90 bp AATATAAGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGAGAATGCTCCAGGTTGTaGAGCATCACAAACTTTAGA +
Preference number: 4 (lower is better)
Translates to: NISFTRHEGLHKEIKAQRECSRL*SITNFR
Trigger: TCTAAAGTTTGTGATGCTTCACAACCTGGAGCATTC...TCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACTTATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp AATATAAGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGATCCATATTTTTCAGTTaGGCAATCCACCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: NISFTRHEGLHKEIKAQRSIFFS*AIHQVL
Trigger: CAGAACCTGGTGGATTGCTCAACTGAAAAATATGGA...TCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACTTATATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp AGAGGGAAAGCTAGCAATCCCACAATGATTTCCTTTATTTCTTGCCATCCGAATTCCATATTTTTCAGTTaGGCAATCCACCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: RGKASNPTMISFISCHPNSIFFS*AIHQVL
Trigger: CAGAACCTGGTGGATTGCTCAACTGAAAAATATGGA...ATTCGGATGGCAAGAAATAAAGGAAATCATTGTGGGATTGCTAGCTTTCCCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR TCA 90 bp AAATTTAAAGTTCCTGCTGCCTGCTTAGATGCATCTACTAATCTAGAGCAGTTGTGCCCTTGTTATCAATaGTGTACTGGAAAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: KFKVPAACLDASTNLEQLCPCYQ*CTGKPL
Trigger: CAACGGCTTTCCAGTACATCATTGATAACAAGGGCA...CAACTGCTCTAGATTAGTAGATGCATCTAAGCAGGCAGCAGGAACTTTAAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp GTTTTTCACAAGCCAGTATTCTTTCCCATTAAGATCACCATAGCCAACCACAAGAAGTTCAGTGTACTTTaGACATGTGGCAGCACGATA +
Preference number: 4 (lower is better)
Translates to: VFHKPVFFPIKITIANHKKFSVL*TCGSTI
Trigger: TATCGTGCTGCCACATGTTCAAAGTACACTGAACTT...CTTGTGGTTGGCTATGGTGATCTTAATGGGAAAGAATACTGGCTTGTGAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483930.2
CDS-3UTR GCA 90 bp AATCCCACAATGATTTCCTTTATTTCTTGCCATCCGAATATATCCTTCTTCACCATCTTTATGCAACTGTaGCACTGCAGAGGAGCACAC +
Preference number: 4 (lower is better)
Translates to: NPTMISFISCHPNISFFTIFMQL*HCRGAH
Trigger: GTGTGCTCCTCTGCAGTGGCACAGTTGCATAAAGAT...GGTGAAGAAGGATATATTCGGATGGCAAGAAATAAAGGAAATCATTGTGGGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483930.2
ENST00000680471.1
ENST00000680931.1
CDS-3UTR GCA 90 bp AGAGATCCTCTAGATTTCTGGGTAAGAGGGAAAGCTAGCAATCCCACAATGATTGATGAGACGTCGTACTaGTTCTTCATTCTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: RDPLDFWVRGKASNPTMIDETSY*FFILFL
Trigger: AAGGAAAAGAATGAAGAAGCAGTACGACGTCTCATC...AATCATTGTGGGATTGCTAGCTTTCCCTCTTACCCAGAAATCTAGAGGATCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR GCA 90 bp GTAAGAGGGAAAGCTAGCAATCCCACAATGATTTCCTTTATTTCTTGCCATCCGGATGAGACGTCGTACTaGTTCTTCATTCTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: VRGKASNPTMISFISCHPDETSY*FFILFL
Trigger: AAGGAAAAGAATGAAGAAGCAGTACGACGTCTCATC...CGGATGGCAAGAAATAAAGGAAATCATTGTGGGATTGCTAGCTTTCCCTCTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR GCA 90 bp GTTATAAAAAGGAGAGATCCTCTAGATTTCTGGGTAAGAGGGAAAGCTAGCAATTATGTGATATTTCTCTaGCACTGGCTGGGAACTCTC +
Preference number: 4 (lower is better)
Translates to: VIKRRDPLDFWVRGKASNYVIFL*HWLGTL
Trigger: GAGAGTTCCCAGCCAGTGGCAGAGAAATATCACATA...ATTGCTAGCTTTCCCTCTTACCCAGAAATCTAGAGGATCTCTCCTTTTTATAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR GCA 90 bp ATTCTGGTTGGCTCAGTTATTTGCCAAATAAAGGCCCTGGTCAAATTGTTGATGTCAGGACATCTTCTCTaGCATAAGGAAGTTCAGTGT +
Preference number: 4 (lower is better)
Translates to: ILVGSVICQIKALVKLLMSGHLL*HKEVQC
Trigger: ACACTGAACTTCCTTATGGCAGAGAAGATGTCCTGA...CATCAACAATTTGACCAGGGCCTTTATTTGGCAAATAACTGAGCCAACCAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp AGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGAAACAGTTTATCAATGATGTACTaGAAAGCCGTTGTCATGAAG +
Preference number: 4 (lower is better)
Translates to: SFTRHEGLHKEIKAQRNSLSMMY*KAVVMK
Trigger: CTTCATGACAACGGCTTTCCAGTACATCATTGATAA...ACTGTTTCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp AATATAAGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGAGACATTTCTGATCCATaGCTTTGTAGGGATAGGAAG +
Preference number: 4 (lower is better)
Translates to: NISFTRHEGLHKEIKAQRDISDP*LCRDRK
Trigger: CTTCCTATCCCTACAAAGCCATGGATCAGAAATGTC...TCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACTTATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp AGTATTGGTTATTTTATTCTGGTTGGCTCAGTTATTTGCCAAATAAAGGCCCTGCCAGCCTGGCTAATGTaGCAAAACCCTGTCTTTACT +
Preference number: 4 (lower is better)
Translates to: SIGYFILVGSVICQIKALPAWLM*QNPVFT
Trigger: AGTAAAGACAGGGTTTTGCCACATTAGCCAGGCTGG...CAGGGCCTTTATTTGGCAAATAACTGAGCCAACCAGAATAAAATAACCAATACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp AATATAAGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGAGTAGGCTGGGCTCAGTaGCTCAAACTATATTTTCTA +
Preference number: 4 (lower is better)
Translates to: NISFTRHEGLHKEIKAQRVGWAQ*LKLYFL
Trigger: TAGAAAATATAGTTTGAGCCACTGAGCCCAGCCTAC...TCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACTTATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000607427.2
CDS-3UTR TCA 90 bp CCCACAATGATTTCCTTTATTTCTTGCCATCCGAATATATCCTTCTTCACCAAAGATTCTTTTCCCAGATaGGACGTCGTACTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: PTMISFISCHPNISFFTKDSFPR*DVVLLL
Trigger: AAGAAGCAGTACGACGTCTCATCTGGGAAAAGAATC...TTTGGTGAAGAAGGATATATTCGGATGGCAAGAAATAAAGGAAATCATTGTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000483930.2
ENST00000680471.1
ENST00000680931.1
CDS-3UTR TCA 90 bp AAATTTAAAGTTCCTGCTGCCTGCTTAGATGCATCTACTAATCTAGAGCAGTTGGAATGCTCCAGGTTGTaGAGCATCACAAACTTTAGA +
Preference number: 4 (lower is better)
Translates to: KFKVPAACLDASTNLEQLECSRL*SITNFR
Trigger: TCTAAAGTTTGTGATGCTTCACAACCTGGAGCATTC...CAACTGCTCTAGATTAGTAGATGCATCTAAGCAGGCAGCAGGAACTTTAAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp GTTATAAAAAGGAGAGATCCTCTAGATTTCTGGGTAAGAGGGAAAGCTAGCAATGGTTTGACTTATATGTaGTATTTCTCTGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: VIKRRDPLDFWVRGKASNGLTYM*YFSATG
Trigger: GCCAGTGGCAGAGAAATATCACATATAAGTCAAACC...ATTGCTAGCTTTCCCTCTTACCCAGAAATCTAGAGGATCTCTCCTTTTTATAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR TCA 90 bp TTTGTTATAAAAAGGAGAGATCCTCTAGATTTCTGGGTAAGAGGGAAAGCTAGCTCCATATTTTTCAGTTaGGCAATCCACCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: FVIKRRDPLDFWVRGKASSIFFS*AIHQVL
Trigger: CAGAACCTGGTGGATTGCTCAACTGAAAAATATGGA...GCTAGCTTTCCCTCTTACCCAGAAATCTAGAGGATCTCTCCTTTTTATAACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR TCA 90 bp GTTATAAAAAGGAGAGATCCTCTAGATTTCTGGGTAAGAGGGAAAGCTAGCAATTCCATATTTTTCAGTTaGGCAATCCACCAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: VIKRRDPLDFWVRGKASNSIFFS*AIHQVL
Trigger: CAGAACCTGGTGGATTGCTCAACTGAAAAATATGGA...ATTGCTAGCTTTCCCTCTTACCCAGAAATCTAGAGGATCTCTCCTTTTTATAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR TCA 90 bp GTTATAAAAAGGAGAGATCCTCTAGATTTCTGGGTAAGAGGGAAAGCTAGCAATAAGTTCAGTGTACTTTaGACATGTGGCAGCACGATA +
Preference number: 4 (lower is better)
Translates to: VIKRRDPLDFWVRGKASNKFSVL*TCGSTI
Trigger: TATCGTGCTGCCACATGTTCAAAGTACACTGAACTT...ATTGCTAGCTTTCCCTCTTACCCAGAAATCTAGAGGATCTCTCCTTTTTATAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000483930.2
ENST00000680931.1
CDS-3UTR TCA 90 bp ATTCTGGTTGGCTCAGTTATTTGCCAAATAAAGGCCCTGGTCAAATTGTTGATGCTAGCAATCCCACAATaGTTTCCTTTATTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: ILVGSVICQIKALVKLLMLAIPQ*FPLFLA
Trigger: GGCAAGAAATAAAGGAAATCATTGTGGGATTGCTAG...CATCAACAATTTGACCAGGGCCTTTATTTGGCAAATAACTGAGCCAACCAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp GTTTTTCACAAGCCAGTATTCTTTCCCATTAAGATCACCATAGCCAACCACAAGCTAGCAATCCCACAATaGTTTCCTTTATTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: VFHKPVFFPIKITIANHKLAIPQ*FPLFLA
Trigger: GGCAAGAAATAAAGGAAATCATTGTGGGATTGCTAG...CTTGTGGTTGGCTATGGTGATCTTAATGGGAAAGAATACTGGCTTGTGAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000483930.2
ENST00000680471.1
CDS-3UTR TCA 90 bp AATATAAGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGAAGAGCACCTCTTACATaGCAGTCTTATGATCTACTT +
Preference number: 4 (lower is better)
Translates to: NISFTRHEGLHKEIKAQRRAPLT*QSYDLL
Trigger: AAGTAGATCATAAGACTGTCATGTAAGAGGTGCTCT...TCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACTTATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp ATTCTGGTTGGCTCAGTTATTTGCCAAATAAAGGCCCTGGTCAAATTGTTGATGAGAGCACCTCTTACATaGCAGTCTTATGATCTACTT +
Preference number: 4 (lower is better)
Translates to: ILVGSVICQIKALVKLLMRAPLT*QSYDLL
Trigger: AAGTAGATCATAAGACTGTCATGTAAGAGGTGCTCT...CATCAACAATTTGACCAGGGCCTTTATTTGGCAAATAACTGAGCCAACCAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp GTTATAAAAAGGAGAGATCCTCTAGATTTCTGGGTAAGAGGGAAAGCTAGCAATCTCCATCCAACATGGTaGAACTCCATCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: VIKRRDPLDFWVRGKASNLHPTW*NSISTK
Trigger: TTTAGTAGAGATGGAGTTTCACCATGTTGGATGGAG...ATTGCTAGCTTTCCCTCTTACCCAGAAATCTAGAGGATCTCTCCTTTTTATAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680931.1
CDS-3UTR GCA 90 bp AATATAAGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGAGATGAGACGTCGTACTaGTTCTTCATTCTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: NISFTRHEGLHKEIKAQRDETSY*FFILFL
Trigger: AAGGAAAAGAATGAAGAAGCAGTACGACGTCTCATC...TCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACTTATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000680288.1
CDS-3UTR GCA 90 bp ATTCTGGTTGGCTCAGTTATTTGCCAAATAAAGGCCCTGGTCAAATTGTTGATGGATGAGACGTCGTACTaGTTCTTCATTCTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: ILVGSVICQIKALVKLLMDETSY*FFILFL
Trigger: AAGGAAAAGAATGAAGAAGCAGTACGACGTCTCATC...CATCAACAATTTGACCAGGGCCTTTATTTGGCAAATAACTGAGCCAACCAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000680288.1
CDS-3UTR GCA 90 bp AAATTTAAAGTTCCTGCTGCCTGCTTAGATGCATCTACTAATCTAGAGCAGTTGTCAGGACATCTTCTCTaGCATAAGGAAGTTCAGTGT +
Preference number: 4 (lower is better)
Translates to: KFKVPAACLDASTNLEQLSGHLL*HKEVQC
Trigger: ACACTGAACTTCCTTATGGCAGAGAAGATGTCCTGA...CAACTGCTCTAGATTAGTAGATGCATCTAAGCAGGCAGCAGGAACTTTAAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR GCA 90 bp ATTCTGGTTGGCTCAGTTATTTGCCAAATAAAGGCCCTGGTCAAATTGTTGATGAAAGTTCCTGCTGCCTaGTTAGATGCATCTACTAAT +
Preference number: 4 (lower is better)
Translates to: ILVGSVICQIKALVKLLMKVPAA*LDASTN
Trigger: ATTAGTAGATGCATCTAAGCAGGCAGCAGGAACTTT...CATCAACAATTTGACCAGGGCCTTTATTTGGCAAATAACTGAGCCAACCAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp CATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAAACTATATTTTCTTGTACTTTGAACATGTaGCAGCACGATATTTTGAGT +
Preference number: 4 (lower is better)
Translates to: HSLNLLGSRNLVPQTIFSCTLNM*QHDILS
Trigger: ACTCAAAATATCGTGCTGCCACATGTTCAAAGTACA...AGAAAATATAGTTTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681444.1
CDS-3UTR CCA 90 bp AATATAAGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGAATTCTGAGTACAGGATaGTTCATAGTAGACACCACT +
Preference number: 4 (lower is better)
Translates to: NISFTRHEGLHKEIKAQRILSTG*FIVDTT
Trigger: AGTGGTGTCTACTATGAACCATCCTGTACTCAGAAT...TCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACTTATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp AATCCCACAATGATTTCCTTTATTTCTTGCCATCCGAATATATCCTTCTTCACCGATCCTCTAGATTTCTaGGTAAGAGGGAAAGCTAGC +
Preference number: 4 (lower is better)
Translates to: NPTMISFISCHPNISFFTDPLDF*VRGKAS
Trigger: GCTAGCTTTCCCTCTTACCCAGAAATCTAGAGGATC...GGTGAAGAAGGATATATTCGGATGGCAAGAAATAAAGGAAATCATTGTGGGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483930.2
ENST00000680471.1
ENST00000680931.1
CDS-3UTR TCA 90 bp CCCACAATGATTTCCTTTATTTCTTGCCATCCGAATATATCCTTCTTCACCAAAGAATGCTCCAGGTTGTaGAGCATCACAAACTTTAGA +
Preference number: 4 (lower is better)
Translates to: PTMISFISCHPNISFFTKECSRL*SITNFR
Trigger: TCTAAAGTTTGTGATGCTTCACAACCTGGAGCATTC...TTTGGTGAAGAAGGATATATTCGGATGGCAAGAAATAAAGGAAATCATTGTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483930.2
ENST00000680471.1
ENST00000680931.1
CDS-3UTR TCA 90 bp AAATTTAAAGTTCCTGCTGCCTGCTTAGATGCATCTACTAATCTAGAGCAGTTGGGCAGCACGATATTTTaGGTCATATTGACATTTCTG +
Preference number: 4 (lower is better)
Translates to: KFKVPAACLDASTNLEQLGSTIF*VILTFL
Trigger: CAGAAATGTCAATATGACTCAAAATATCGTGCTGCC...CAACTGCTCTAGATTAGTAGATGCATCTAAGCAGGCAGCAGGAACTTTAAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp GCTAGCAATCCCACAATGATTTCCTTTATTTCTTGCCATCCGAATATATCCTTCGGCAGCACGATATTTTaGGTCATATTGACATTTCTG +
Preference number: 4 (lower is better)
Translates to: ASNPTMISFISCHPNISFGSTIF*VILTFL
Trigger: CAGAAATGTCAATATGACTCAAAATATCGTGCTGCC...GAAGGATATATTCGGATGGCAAGAAATAAAGGAAATCATTGTGGGATTGCTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483930.2
ENST00000680931.1
CDS-3UTR TCA 90 bp TTTGTTATAAAAAGGAGAGATCCTCTAGATTTCTGGGTAAGAGGGAAAGCTAGCCTAGCAATCCCACAATaGTTTCCTTTATTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: FVIKRRDPLDFWVRGKASLAIPQ*FPLFLA
Trigger: GGCAAGAAATAAAGGAAATCATTGTGGGATTGCTAG...GCTAGCTTTCCCTCTTACCCAGAAATCTAGAGGATCTCTCCTTTTTATAACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR TCA 90 bp ATTCTGGTTGGCTCAGTTATTTGCCAAATAAAGGCCCTGGTCAAATTGTTGATGAATTATGTTAAAAACTaGAAAGTAGGCTGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: ILVGSVICQIKALVKLLMNYVKN*KVGWAQ
Trigger: CTGAGCCCAGCCTACTTTTCAGTTTTTAACATAATT...CATCAACAATTTGACCAGGGCCTTTATTTGGCAAATAACTGAGCCAACCAGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR GCA 90 bp AATCCCACAATGATTTCCTTTATTTCTTGCCATCCGAATATATCCTTCTTCACCTCAGGACATCTTCTCTaGCATAAGGAAGTTCAGTGT +
Preference number: 4 (lower is better)
Translates to: NPTMISFISCHPNISFFTSGHLL*HKEVQC
Trigger: ACACTGAACTTCCTTATGGCAGAGAAGATGTCCTGA...GGTGAAGAAGGATATATTCGGATGGCAAGAAATAAAGGAAATCATTGTGGGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483930.2
ENST00000680931.1
CDS-3UTR CCA 90 bp TTCTGGGTAAGAGGGAAAGCTAGCAATCCCACAATGATTTCCTTTATTTCTTGCTTATCAATGATGTACTaGAAAGCCGTTGTCATGAAG +
Preference number: 4 (lower is better)
Translates to: FWVRGKASNPTMISFISCLSMMY*KAVVMK
Trigger: CTTCATGACAACGGCTTTCCAGTACATCATTGATAA...GCAAGAAATAAAGGAAATCATTGTGGGATTGCTAGCTTTCCCTCTTACCCAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR CCA 90 bp AATATAAGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGATTATCAATGATGTACTaGAAAGCCGTTGTCATGAAG +
Preference number: 4 (lower is better)
Translates to: NISFTRHEGLHKEIKAQRLSMMY*KAVVMK
Trigger: CTTCATGACAACGGCTTTCCAGTACATCATTGATAA...TCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACTTATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp ATTCTGGTTGGCTCAGTTATTTGCCAAATAAAGGCCCTGGTCAAATTGTTGATGTGTACTTTGAACATGTaGCAGCACGATATTTTGAGT +
Preference number: 4 (lower is better)
Translates to: ILVGSVICQIKALVKLLMCTLNM*QHDILS
Trigger: ACTCAAAATATCGTGCTGCCACATGTTCAAAGTACA...CATCAACAATTTGACCAGGGCCTTTATTTGGCAAATAACTGAGCCAACCAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp AATATAAGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGATGTACTTTGAACATGTaGCAGCACGATATTTTGAGT +
Preference number: 4 (lower is better)
Translates to: NISFTRHEGLHKEIKAQRCTLNM*QHDILS
Trigger: ACTCAAAATATCGTGCTGCCACATGTTCAAAGTACA...TCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACTTATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp AGTATTGGTTATTTTATTCTGGTTGGCTCAGTTATTTGCCAAATAAAGGCCCTGGGCAGCACGATATTTTaGGTCATATTGACATTTCTG +
Preference number: 4 (lower is better)
Translates to: SIGYFILVGSVICQIKALGSTIF*VILTFL
Trigger: CAGAAATGTCAATATGACTCAAAATATCGTGCTGCC...CAGGGCCTTTATTTGGCAAATAACTGAGCCAACCAGAATAAAATAACCAATACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR TCA 90 bp AGTATTGGTTATTTTATTCTGGTTGGCTCAGTTATTTGCCAAATAAAGGCCCTGAGAGCACCTCTTACATaGCAGTCTTATGATCTACTT +
Preference number: 4 (lower is better)
Translates to: SIGYFILVGSVICQIKALRAPLT*QSYDLL
Trigger: AAGTAGATCATAAGACTGTCATGTAAGAGGTGCTCT...CAGGGCCTTTATTTGGCAAATAACTGAGCCAACCAGAATAAAATAACCAATACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp AATCCCACAATGATTTCCTTTATTTCTTGCCATCCGAATATATCCTTCTTCACCATTCTGAGTACAGGATaGTTCATAGTAGACACCATG +
Preference number: 4 (lower is better)
Translates to: NPTMISFISCHPNISFFTILSTG*FIVDTM
Trigger: CATGGTGTCTACTATGAACCATCCTGTACTCAGAAT...GGTGAAGAAGGATATATTCGGATGGCAAGAAATAAAGGAAATCATTGTGGGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680471.1
3UTR CAA 72 bp GAGTATTGGTTATTTTATTCTGGTTGGCTCAGTTATTaGCCAAATAAAGGCCCTGGTCAAATTGTTGATGAC +
Preference number: 4 (lower is better)
Translates to: EYWLFYSGWLSY*PNKGPGQIVDD
Trigger: GTCATCAACAATTTGACCAGGGCCTTTATTTGGCAAATAACTGAGCCAACCAGAATAAAATAACCAATACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CCA 90 bp AATCCCACAATGATTTCCTTTATTTCTTGCCATCCGAATATATCCTTCTTCACCTTATCAATGATGTACTaGAAAGCCGTTGTCATGAAG +
Preference number: 4 (lower is better)
Translates to: NPTMISFISCHPNISFFTLSMMY*KAVVMK
Trigger: CTTCATGACAACGGCTTTCCAGTACATCATTGATAA...GGTGAAGAAGGATATATTCGGATGGCAAGAAATAAAGGAAATCATTGTGGGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483930.2
ENST00000680471.1
ENST00000680931.1
CDS-3UTR CCA 90 bp CCCACAATGATTTCCTTTATTTCTTGCCATCCGAATATATCCTTCTTCACCAAATGTACTTTGAACATGTaGCAGCACGATATTTTGAGT +
Preference number: 4 (lower is better)
Translates to: PTMISFISCHPNISFFTKCTLNM*QHDILS
Trigger: ACTCAAAATATCGTGCTGCCACATGTTCAAAGTACA...TTTGGTGAAGAAGGATATATTCGGATGGCAAGAAATAAAGGAAATCATTGTGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483930.2
ENST00000680931.1
CDS-3UTR CCA 90 bp AAATTTAAAGTTCCTGCTGCCTGCTTAGATGCATCTACTAATCTAGAGCAGTTGTTGGTTATTTTATTCTaGTTGGCTCAGTTATTTGCC +
Preference number: 4 (lower is better)
Translates to: KFKVPAACLDASTNLEQLLVILF*LAQLFA
Trigger: GGCAAATAACTGAGCCAACCAGAATAAAATAACCAA...CAACTGCTCTAGATTAGTAGATGCATCTAAGCAGGCAGCAGGAACTTTAAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
3UTR CAA 72 bp CCATCTGAATTAGATAAAAATATGAGCAGTGGAGTATaGGTTATTTTATTCTGGTTGGCTCAGTTATTTGCC +
Preference number: 4 (lower is better)
Translates to: PSELDKNMSSGV*VILFWLAQLFA
Trigger: GGCAAATAACTGAGCCAACCAGAATAAAATAACCAATACTCCACTGCTCATATTTTTATCTAATTCAGATGG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp CCAGGCTGCTCTTTAACTCCTGGCCTCAAGTTGATATGCCTGCCTTGGCCTCCCGACACTGGGCCTTTATaGGCCACAGCTTCTTTCAGG +
Preference number: 5 (lower is better)
Translates to: PGCSLTPGLKLICLPWPPDTGPL*ATASFR
Trigger: CCTGAAAGAAGCTGTGGCCAATAAAGGCCCAGTGTC...GGGAGGCCAAGGCAGGCATATCAACTTGAGGCCAGGAGTTAAAGAGCAGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR CAA 90 bp CCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCACCGTTGATATGCCTGCCTaGGCCTCCCAAGTACTGGGA +
Preference number: 5 (lower is better)
Translates to: PGFMAASGENSRQKVRVTVDMPA*ASQVLG
Trigger: TCCCAGTACTTGGGAGGCCAAGGCAGGCATATCAAC...GGTGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp CCAGGCTGCTCTTTAACTCCTGGCCTCAAGTTGATATGCCTGCCTTGGCCTCCCCCTTCTTCACCAAAGTaGTGGCCCCAGCTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: PGCSLTPGLKLICLPWPPPSSPK*WPQLFF
Trigger: GAAAAACAGCTGGGGCCACAACTTTGGTGAAGAAGG...GGGAGGCCAAGGCAGGCATATCAACTTGAGGCCAGGAGTTAAAGAGCAGCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679898.1
ENST00000680288.1
ENST00000680471.1
ENST00000680664.1
CDS-3UTR CAA 90 bp CCAGGCTGCTCTTTAACTCCTGGCCTCAAGTTGATATGCCTGCCTTGGCCTCCCCATAGCCTCAACCTCTaGGGTTCAAGGAATCTCGTG +
Preference number: 5 (lower is better)
Translates to: PGCSLTPGLKLICLPWPPHSLNL*GSRNLV
Trigger: CACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATG...GGGAGGCCAAGGCAGGCATATCAACTTGAGGCCAGGAGTTAAAGAGCAGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR CAA 90 bp TGGCGTGATCTCGGCTCACTGCACCTCCACCTCCTGAGTTCAAGCGATTCTCCTGGCAGCACAAAAAGTTaGCTTAAGACGCACCATGGC +
Preference number: 5 (lower is better)
Translates to: WRDLGSLHLHLLSSSDSPGSTKS*LKTHHG
Trigger: GCCATGGTGCGTCTTAAGCAAACTTTTTGTGCTGCC...AGGAGAATCGCTTGAACTCAGGAGGTGGAGGTGCAGTGAGCCGAGATCACGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679582.1
CDS-3UTR CAA 90 bp TGGCGTGATCTCGGCTCACTGCACCTCCACCTCCTGAGTTCAAGCGATTCTCCTGATCTGAGAATAAGGTaGAGCATGGGAGGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: WRDLGSLHLHLLSSSDSPDLRIR*SMGGCR
Trigger: TCTGCAGCCTCCCATGCTCAACCTTATTCTCAGATC...AGGAGAATCGCTTGAACTCAGGAGGTGGAGGTGCAGTGAGCCGAGATCACGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679582.1
CDS GCA 90 bp CCAGAGATGCCAGTGGTGATCCAGGGTAGGATCTTTATGCAACTGTaGCACTGCAGAGGAGCACACCAAGAGCACACAAACCAGCCGTTT +
Preference number: 5 (lower is better)
Translates to: PEMPVVIQGRIFMQL*HCRGAHQEHTNQPF
Trigger: AAACGGCTGGTTTGTGTGCTCTTGGTGTGCTCCTCTGCAGTGGCACAGTTGCATAAAGATCCTACCCTGGATCACCACTGGCATCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000472977.7
ENST00000480760.2
ENST00000483930.2
ENST00000607427.2
ENST00000679512.1
ENST00000679582.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680466.1
ENST00000680471.1
ENST00000680931.1
ENST00000681444.1
ENST00000681728.1
ENST00000681863.1
CDS-3UTR CAA 90 bp CAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCCTCGACACTGGGCCTTTATaGGCCACAGCTTCTTTCAGG +
Preference number: 5 (lower is better)
Translates to: QLNIASTSWVQGISCLSLDTGPL*ATASFR
Trigger: CCTGAAAGAAGCTGTGGCCAATAAAGGCCCAGTGTC...GAGGCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR CAA 90 bp GGTAAGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTGTTGATATGCCTGCCTaGGCCTCCCAAGTACTGGGA +
Preference number: 5 (lower is better)
Translates to: GKDAPFLWVPGEHLLHDSVDMPA*ASQVLG
Trigger: TCCCAGTACTTGGGAGGCCAAGGCAGGCATATCAAC...ACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp CCAGGCTGCTCTTTAACTCCTGGCCTCAAGTTGATATGCCTGCCTTGGCCTCCCGGTTGGCTCAGTTATTaGCCAAATAAAGGCCCTGGT +
Preference number: 5 (lower is better)
Translates to: PGCSLTPGLKLICLPWPPGWLSY*PNKGPG
Trigger: ACCAGGGCCTTTATTTGGCAAATAACTGAGCCAACC...GGGAGGCCAAGGCAGGCATATCAACTTGAGGCCAGGAGTTAAAGAGCAGCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp TGGCGTGATCTCGGCTCACTGCACCTCCACCTCCTGAGTTCAAGCGATTCTCCTTCTGAGTCGATGCCCTaGTTATCAATGATGTACTGG +
Preference number: 5 (lower is better)
Translates to: WRDLGSLHLHLLSSSDSPSESMP*LSMMYW
Trigger: CCAGTACATCATTGATAACAAGGGCATCGACTCAGA...AGGAGAATCGCTTGAACTCAGGAGGTGGAGGTGCAGTGAGCCGAGATCACGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679582.1
CDS-3UTR CAA 90 bp TCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCGACACTGGGCCTTTATaGGCCACAGCTTCTTTCAGG +
Preference number: 5 (lower is better)
Translates to: SQLNIASTSWVQGISCLSDTGPL*ATASFR
Trigger: CCTGAAAGAAGCTGTGGCCAATAAAGGCCCAGTGTC...GCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR CAA 90 bp GAGTACAGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGGTTGATATGCCTGCCTaGGCCTCCCAAGTACTGGGA +
Preference number: 5 (lower is better)
Translates to: EYSGVISAQHSLNLLGSRVDMPA*ASQVLG
Trigger: TCCCAGTACTTGGGAGGCCAAGGCAGGCATATCAAC...CCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACTGTACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR CAA 90 bp GATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGTGTAATCTTAGCACTTaGGGAGGCTGGGGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: DAPFLWVPGEHLLHDSLMCNLST*GGWGGW
Trigger: CCACCCACCCCAGCCTCCCAAAGTGCTAAGATTACA...CATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp GCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCTGTAATCTTAGCACTTaGGGAGGCTGGGGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: APFLWVPGEHLLHDSLMICNLST*GGWGGW
Trigger: CCACCCACCCCAGCCTCCCAAAGTGCTAAGATTACA...GATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp GTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTTGTAATCTTAGCACTTaGGGAGGCTGGGGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: VISAQHSLNLLGSRNLVPCNLST*GGWGGW
Trigger: CCACCCACCCCAGCCTCCCAAAGTGCTAAGATTACA...AGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp TCCCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCATGTGTCCCTGTGCTTTaGGAGGTAAGGATGCTCCTT +
Preference number: 5 (lower is better)
Translates to: SQVLWLLLGRTAGRRSESCVPVL*EVRMLL
Trigger: AAGGAGCATCCTTACCTCCAAAAGCACAGGGACACA...TGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS GCA 90 bp ATGCCAGTGGTGATCCAGGGTAGGATCTTTATGCAACTGTGCCACTaGAGAGGAGCACACCAAGAGCACACAAACCAGCCGTTTCATTGT +
Preference number: 5 (lower is better)
Translates to: MPVVIQGRIFMQLCH*RGAHQEHTNQPFHC
Trigger: ACAATGAAACGGCTGGTTTGTGTGCTCTTGGTGTGCTCCTCTGCAGTGGCACAGTTGCATAAAGATCCTACCCTGGATCACCACTGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000472977.7
ENST00000480760.2
ENST00000483930.2
ENST00000607427.2
ENST00000679512.1
ENST00000679582.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680466.1
ENST00000680471.1
ENST00000680931.1
ENST00000681444.1
ENST00000681728.1
ENST00000681863.1
CDS-3UTR CAA 90 bp CCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCACCTCTGAGTCGATGCCCTaGTTATCAATGATGTACTGG +
Preference number: 5 (lower is better)
Translates to: PGFMAASGENSRQKVRVTSESMP*LSMMYW
Trigger: CCAGTACATCATTGATAACAAGGGCATCGACTCAGA...GGTGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp GCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCGACACTGGGCCTTTATaGGCCACAGCTTCTTTCAGG +
Preference number: 5 (lower is better)
Translates to: APFLWVPGEHLLHDSLMIDTGPL*ATASFR
Trigger: CCTGAAAGAAGCTGTGGCCAATAAAGGCCCAGTGTC...GATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp AGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTTGATATGCCTGCCTaGGCCTCCCAAGTACTGGGA +
Preference number: 5 (lower is better)
Translates to: SGVISAQHSLNLLGSRNLVDMPA*ASQVLG
Trigger: TCCCAGTACTTGGGAGGCCAAGGCAGGCATATCAAC...GAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR CAA 90 bp CCAGGCTGCTCTTTAACTCCTGGCCTCAAGTTGATATGCCTGCCTTGGCCTCCCTTTCTTCCATCAAAGTaGCTAAACCCCATCACCAGA +
Preference number: 5 (lower is better)
Translates to: PGCSLTPGLKLICLPWPPFLPSK*LNPITR
Trigger: TCTGGTGATGGGGTTTAGCAACTTTGATGGAAGAAA...GGGAGGCCAAGGCAGGCATATCAACTTGAGGCCAGGAGTTAAAGAGCAGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp CAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCCTCGGTTGGCTCAGTTATTaGCCAAATAAAGGCCCTGGT +
Preference number: 5 (lower is better)
Translates to: QLNIASTSWVQGISCLSLGWLSY*PNKGPG
Trigger: ACCAGGGCCTTTATTTGGCAAATAACTGAGCCAACC...GAGGCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp TCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCTGTGTCCCTGTGCTTTaGGAGGTAAGGATGCTCCTT +
Preference number: 5 (lower is better)
Translates to: SQLNIASTSWVQGISCLSCVPVL*EVRMLL
Trigger: AAGGAGCATCCTTACCTCCAAAAGCACAGGGACACA...GCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp GTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCCTTCTTCACCAAAGTaGTGGCCCCAGCACTTCTGT +
Preference number: 5 (lower is better)
Translates to: VISAQHSLNLLGSRNLVPPSSPK*WPQHFC
Trigger: ACAGAAGTGCTGGGGCCACAACTTTGGTGAAGAAGG...AGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679512.1
CDS-3UTR CAA 90 bp GTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCCTTCTTCACCAAAGTaGTGGCCCCAGCATGGCTTT +
Preference number: 5 (lower is better)
Translates to: VISAQHSLNLLGSRNLVPPSSPK*WPQHGF
Trigger: AAAGCCATGCTGGGGCCACAACTTTGGTGAAGAAGG...AGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680311.1
CDS TCA 90 bp CCAAAGTTGTGGCCCCAGCATGGCTTTGTAGGGATAGGAAGCGTCTaGGTCGATGCCCTTGTTATCAATGATGTACTGGAAAGCCGTTGT +
Preference number: 5 (lower is better)
Translates to: PKLWPQHGFVGIGSV*VDALVINDVLESRC
Trigger: ACAACGGCTTTCCAGTACATCATTGATAACAAGGGCATCGACTCAGACGCTTCCTATCCCTACAAAGCCATGCTGGGGCCACAACTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680311.1
CDS CCA 90 bp GTAGAGGAAGAAAGAAGGATGACGCGCATCTACACCAACAGACACTaGGCCTTTATTGGCCACAGCTTCTTTCAGGACATCTTCTCTGCC +
Preference number: 5 (lower is better)
Translates to: VEEERRMTRIYTNRH*AFIGHSFFQDIFSA
Trigger: GGCAGAGAAGATGTCCTGAAAGAAGCTGTGGCCAATAAAGGCCCAGTGTCTGTTGGTGTAGATGCGCGTCATCCTTCTTTCTTCCTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000472977.7
ENST00000483930.2
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
ENST00000681728.1
CDS-3UTR CAA 90 bp TGGCGTGATCTCGGCTCACTGCACCTCCACCTCCTGAGTTCAAGCGATTCTCCTAGCACCACAAGAACCTaGATATTTCACTTCAGTAAC +
Preference number: 5 (lower is better)
Translates to: WRDLGSLHLHLLSSSDSPSTTRT*IFHFSN
Trigger: GTTACTGAAGTGAAATATCAAGGTTCTTGTGGTGCT...AGGAGAATCGCTTGAACTCAGGAGGTGGAGGTGCAGTGAGCCGAGATCACGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679582.1
CDS-3UTR CAA 90 bp CAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCCTCTCTGAGTCGATGCCCTaGTTATCAATGATGTACTGG +
Preference number: 5 (lower is better)
Translates to: QLNIASTSWVQGISCLSLSESMP*LSMMYW
Trigger: CCAGTACATCATTGATAACAAGGGCATCGACTCAGA...GAGGCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR CAA 90 bp CCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCTACGACACTGGGCCTTTATaGGCCACAGCTTCTTTCAGG +
Preference number: 5 (lower is better)
Translates to: PFLWVPGEHLLHDSLMIYDTGPL*ATASFR
Trigger: CCTGAAAGAAGCTGTGGCCAATAAAGGCCCAGTGTC...GTAGATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp AGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGACACTGGGCCTTTATaGGCCACAGCTTCTTTCAGG +
Preference number: 5 (lower is better)
Translates to: SGVISAQHSLNLLGSRNLDTGPL*ATASFR
Trigger: CCTGAAAGAAGCTGTGGCCAATAAAGGCCCAGTGTC...GAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR CAA 90 bp ATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCCTTCTTCACCAAAGTaGTGGCCCCAGCTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: ISAQHSLNLLGSRNLVPQPSSPK*WPQLFF
Trigger: GAAAAACAGCTGGGGCCACAACTTTGGTGAAGAAGG...CTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679898.1
ENST00000680288.1
ENST00000680471.1
ENST00000680664.1
CDS-3UTR CAA 90 bp GTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCCTTCTTCACCAAAGTaGTGGCCCCAGCTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: VISAQHSLNLLGSRNLVPPSSPK*WPQLFF
Trigger: GAAAAACAGCTGGGGCCACAACTTTGGTGAAGAAGG...AGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679898.1
ENST00000680288.1
ENST00000680471.1
ENST00000680664.1
ENST00000681444.1
CDS-3UTR CAA 90 bp AGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTACCTTCTTCACCAAAGTaGTGGCCCCAGCTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: RMLLFSGCQESTSYMTVLPSSPK*WPQLFF
Trigger: GAAAAACAGCTGGGGCCACAACTTTGGTGAAGAAGG...TAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp GAGTACAGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGCCTTCTTCACCAAAGTaGTGGCCCCAGCTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: EYSGVISAQHSLNLLGSRPSSPK*WPQLFF
Trigger: GAAAAACAGCTGGGGCCACAACTTTGGTGAAGAAGG...CCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACTGTACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679898.1
ENST00000680288.1
ENST00000680471.1
ENST00000680664.1
ENST00000681444.1
CDS-3UTR CAA 90 bp GCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCTGTGTCCCTGTGCTTTaGGAGGTAAGGATGCTCCTT +
Preference number: 5 (lower is better)
Translates to: APFLWVPGEHLLHDSLMICVPVL*EVRMLL
Trigger: AAGGAGCATCCTTACCTCCAAAAGCACAGGGACACA...GATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp GTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTTGTGTCCCTGTGCTTTaGGAGGTAAGGATGCTCCTT +
Preference number: 5 (lower is better)
Translates to: VISAQHSLNLLGSRNLVPCVPVL*EVRMLL
Trigger: AAGGAGCATCCTTACCTCCAAAAGCACAGGGACACA...AGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp CCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCACCTGTTTAGATTCCTCTTaGTGTCCCTGTGCTTTTGGA +
Preference number: 5 (lower is better)
Translates to: PGFMAASGENSRQKVRVTCLDSS*CPCAFG
Trigger: TCCAAAAGCACAGGGACACAAAGAGGAATCTAAACA...GGTGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp TGGCGTGATCTCGGCTCACTGCACCTCCACCTCCTGAGTTCAAGCGATTCTCCTAAAATCTGTTTAATTTaGGGATGGAGTCTTGCTCCG +
Preference number: 5 (lower is better)
Translates to: WRDLGSLHLHLLSSSDSPKICLI*GWSLAP
Trigger: CGGAGCAAGACTCCATCCCAAAATTAAACAGATTTT...AGGAGAATCGCTTGAACTCAGGAGGTGGAGGTGCAGTGAGCCGAGATCACGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679582.1
CDS-3UTR CAA 90 bp GGTAAGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTTCTGAGTCGATGCCCTaGTTATCAATGATGTACTGG +
Preference number: 5 (lower is better)
Translates to: GKDAPFLWVPGEHLLHDSSESMP*LSMMYW
Trigger: CCAGTACATCATTGATAACAAGGGCATCGACTCAGA...ACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp CCAGGCTGCTCTTTAACTCCTGGCCTCAAGTTGATATGCCTGCCTTGGCCTCCCTGGCAGCACGATATTTaGAGTCATATTGACATTTCT +
Preference number: 5 (lower is better)
Translates to: PGCSLTPGLKLICLPWPPWQHDI*SHIDIS
Trigger: AGAAATGTCAATATGACTCAAAATATCGTGCTGCCA...GGGAGGCCAAGGCAGGCATATCAACTTGAGGCCAGGAGTTAAAGAGCAGCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
ENST00000680931.1
CDS-3UTR CAA 90 bp AGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCCCTTCTTCACCAAAGTaGTGGCCCCAGCTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: SGVISAQHSLNLLGSRNLPSSPK*WPQLFF
Trigger: GAAAAACAGCTGGGGCCACAACTTTGGTGAAGAAGG...GAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679898.1
ENST00000680288.1
ENST00000680471.1
ENST00000680664.1
ENST00000681444.1
CDS-3UTR CAA 90 bp TCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAAACTCCTTCTTCACCAAAGTaGTGGCCCCAGCTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: SAQHSLNLLGSRNLVPQTPSSPK*WPQLFF
Trigger: GAAAAACAGCTGGGGCCACAACTTTGGTGAAGAAGG...AGTTTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681444.1
CDS-3UTR CAA 90 bp AAAAGGAGAGATCCTCTAGATTTCTGGGTAAGAGGGAAAGCTAGCAATCCCACAGTTGATATGCCTGCCTaGGCCTCCCAAGTACTGGGA +
Preference number: 5 (lower is better)
Translates to: KRRDPLDFWVRGKASNPTVDMPA*ASQVLG
Trigger: TCCCAGTACTTGGGAGGCCAAGGCAGGCATATCAAC...TGTGGGATTGCTAGCTTTCCCTCTTACCCAGAAATCTAGAGGATCTCTCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR CAA 90 bp TCCCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCAACTACACGTGGCGTTTaGAATCCTCTTCTGTACAAA +
Preference number: 5 (lower is better)
Translates to: SQVLWLLLGRTAGRRSESTTRGV*NPLLYK
Trigger: TTTGTACAGAAGAGGATTCAAAACGCCACGTGTAGT...TGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp AGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTAGGTTGGCTCAGTTATTaGCCAAATAAAGGCCCTGGT +
Preference number: 5 (lower is better)
Translates to: RMLLFSGCQESTSYMTVLGWLSY*PNKGPG
Trigger: ACCAGGGCCTTTATTTGGCAAATAACTGAGCCAACC...TAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp GCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCGGTTGGCTCAGTTATTaGCCAAATAAAGGCCCTGGT +
Preference number: 5 (lower is better)
Translates to: APFLWVPGEHLLHDSLMIGWLSY*PNKGPG
Trigger: ACCAGGGCCTTTATTTGGCAAATAACTGAGCCAACC...GATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp TCCCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCATGTTTAGATTCCTCTTaGTGTCCCTGTGCTTTTGGA +
Preference number: 5 (lower is better)
Translates to: SQVLWLLLGRTAGRRSESCLDSS*CPCAFG
Trigger: TCCAAAAGCACAGGGACACAAAGAGGAATCTAAACA...TGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp CAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCCTCTGTTTAGATTCCTCTTaGTGTCCCTGTGCTTTTGGA +
Preference number: 5 (lower is better)
Translates to: QLNIASTSWVQGISCLSLCLDSS*CPCAFG
Trigger: TCCAAAAGCACAGGGACACAAAGAGGAATCTAAACA...GAGGCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp GATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGCATTTCCCTATGGTCTaGGGGACAAAGTGGATACAG +
Preference number: 5 (lower is better)
Translates to: DAPFLWVPGEHLLHDSLMHFPMV*GTKWIQ
Trigger: CTGTATCCACTTTGTCCCCAAGACCATAGGGAAATG...CATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680288.1
CDS CCA 90 bp AAGAAGGATGACGCGCATCTACACCAACAGACACTGGGCCTTTATTaGCCACAGCTTCTTTCAGGACATCTTCTCTGCCATAAGGAAGTT +
Preference number: 5 (lower is better)
Translates to: KKDDAHLHQQTLGLY*PQLLSGHLLCHKEV
Trigger: AACTTCCTTATGGCAGAGAAGATGTCCTGAAAGAAGCTGTGGCCAATAAAGGCCCAGTGTCTGTTGGTGTAGATGCGCGTCATCCTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000472977.7
ENST00000483930.2
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
ENST00000681728.1
CDS CCA 90 bp CGTGAAAGTGGGATTTCTTGTAATGTACCTACCATGTCTCCCAGGTaGTTCATGCCCAGATCGTATGAGTGCATTCCCATTGAATGCTCC +
Preference number: 5 (lower is better)
Translates to: RESGISCNVPTMSPR*FMPRSYECIPIECS
Trigger: GGAGCATTCAATGGGAATGCACTCATACGATCTGGGCATGAACCACCTGGGAGACATGGTAGGTACATTACAAGAAATCCCACTTTCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681863.1
CDS-3UTR CAA 90 bp GAGTACAGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGATGAGTGCATTCCCATaGAATGCTCCAGGTTGTGAA +
Preference number: 5 (lower is better)
Translates to: EYSGVISAQHSLNLLGSRMSAFP*NAPGCE
Trigger: TTCACAACCTGGAGCATTCAATGGGAATGCACTCAT...CCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACTGTACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR CAA 90 bp GTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTATGAGTGCATTCCCATaGAATGCTCCAGGTTGTGAA +
Preference number: 5 (lower is better)
Translates to: VISAQHSLNLLGSRNLVPMSAFP*NAPGCE
Trigger: TTCACAACCTGGAGCATTCAATGGGAATGCACTCAT...AGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR CAA 90 bp AAGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGAGTGCATTCCCATaGAATGCTCCAGGTTGTGAA +
Preference number: 5 (lower is better)
Translates to: KDAPFLWVPGEHLLHDSLMSAFP*NAPGCE
Trigger: TTCACAACCTGGAGCATTCAATGGGAATGCACTCAT...AAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp AGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATCTGAGTCGATGCCCTaGTTATCAATGATGTACTGG +
Preference number: 5 (lower is better)
Translates to: RMLLFSGCQESTSYMTVLSESMP*LSMMYW
Trigger: CCAGTACATCATTGATAACAAGGGCATCGACTCAGA...TAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp GAGTACAGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGTCTGAGTCGATGCCCTaGTTATCAATGATGTACTGG +
Preference number: 5 (lower is better)
Translates to: EYSGVISAQHSLNLLGSRSESMP*LSMMYW
Trigger: CCAGTACATCATTGATAACAAGGGCATCGACTCAGA...CCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACTGTACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR CAA 90 bp GCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCTCTGAGTCGATGCCCTaGTTATCAATGATGTACTGG +
Preference number: 5 (lower is better)
Translates to: APFLWVPGEHLLHDSLMISESMP*LSMMYW
Trigger: CCAGTACATCATTGATAACAAGGGCATCGACTCAGA...GATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp GTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTGAAGTTCAGTGTACTTaGAACATGTGGCAGCACGAT +
Preference number: 5 (lower is better)
Translates to: VISAQHSLNLLGSRNLVPEVQCT*NMWQHD
Trigger: ATCGTGCTGCCACATGTTCAAAGTACACTGAACTTC...AGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR CAA 90 bp GATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGGAAGTTCAGTGTACTTaGAACATGTGGCAGCACGAT +
Preference number: 5 (lower is better)
Translates to: DAPFLWVPGEHLLHDSLMEVQCT*NMWQHD
Trigger: ATCGTGCTGCCACATGTTCAAAGTACACTGAACTTC...CATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp AGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTAGAAGTTCAGTGTACTTaGAACATGTGGCAGCACGAT +
Preference number: 5 (lower is better)
Translates to: RMLLFSGCQESTSYMTVLEVQCT*NMWQHD
Trigger: ATCGTGCTGCCACATGTTCAAAGTACACTGAACTTC...TAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp GAGTACAGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGGAAGTTCAGTGTACTTaGAACATGTGGCAGCACGAT +
Preference number: 5 (lower is better)
Translates to: EYSGVISAQHSLNLLGSREVQCT*NMWQHD
Trigger: ATCGTGCTGCCACATGTTCAAAGTACACTGAACTTC...CCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACTGTACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR CAA 90 bp TCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGCTTTCTTCCATCAAAGTaGCTAAACCCCATCACCAGA +
Preference number: 5 (lower is better)
Translates to: SQLNIASTSWVQGISCLSFLPSK*LNPITR
Trigger: TCTGGTGATGGGGTTTAGCAACTTTGATGGAAGAAA...GCTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS TCA 90 bp AGTTTGCTTAAGACGCACCATGGCTTTGTAGGGATAGGAAGCGTCTaGGTCGATGCCCTTGTTATCAATGATGTACTGGAAAGCCGTTGT +
Preference number: 5 (lower is better)
Translates to: SLLKTHHGFVGIGSV*VDALVINDVLESRC
Trigger: ACAACGGCTTTCCAGTACATCATTGATAACAAGGGCATCGACTCAGACGCTTCCTATCCCTACAAAGCCATGGTGCGTCTTAAGCAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679582.1
CDS-3UTR CAA 90 bp GGTAAGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTAGCACCACAAGAACCTaGATATTTCACTTCAGTAAC +
Preference number: 5 (lower is better)
Translates to: GKDAPFLWVPGEHLLHDSSTTRT*IFHFSN
Trigger: GTTACTGAAGTGAAATATCAAGGTTCTTGTGGTGCT...ACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000680664.1
CDS-3UTR CAA 90 bp CCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCTACTCTGAGTCGATGCCCTaGTTATCAATGATGTACTGG +
Preference number: 5 (lower is better)
Translates to: PFLWVPGEHLLHDSLMIYSESMP*LSMMYW
Trigger: CCAGTACATCATTGATAACAAGGGCATCGACTCAGA...GTAGATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp AGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCTCTGAGTCGATGCCCTaGTTATCAATGATGTACTGG +
Preference number: 5 (lower is better)
Translates to: SGVISAQHSLNLLGSRNLSESMP*LSMMYW
Trigger: CCAGTACATCATTGATAACAAGGGCATCGACTCAGA...GAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000368985.8
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR CAA 90 bp TCCCAGGTTTTATGGCTGCTTCTGGGGAGAACAGCAGGCAGAAGGTCAGAGTCATGGCAGCACGATATTTaGAGTCATATTGACATTTCT +
Preference number: 5 (lower is better)
Translates to: SQVLWLLLGRTAGRRSESWQHDI*SHIDIS
Trigger: AGAAATGTCAATATGACTCAAAATATCGTGCTGCCA...TGACTCTGACCTTCTGCCTGCTGTTCTCCCCAGAAGCAGCCATAAAACCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp CCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCTACGAAGTTCAGTGTACTTaGAACATGTGGCAGCACGAT +
Preference number: 5 (lower is better)
Translates to: PFLWVPGEHLLHDSLMIYEVQCT*NMWQHD
Trigger: ATCGTGCTGCCACATGTTCAAAGTACACTGAACTTC...GTAGATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp TCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAAACTGAAGTTCAGTGTACTTaGAACATGTGGCAGCACGAT +
Preference number: 5 (lower is better)
Translates to: SAQHSLNLLGSRNLVPQTEVQCT*NMWQHD
Trigger: ATCGTGCTGCCACATGTTCAAAGTACACTGAACTTC...AGTTTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681444.1
CDS-3UTR CAA 90 bp AGAGATCCTCTAGATTTCTGGGTAAGAGGGAAAGCTAGCAATCCCACAATGATTGACACTGGGCCTTTATaGGCCACAGCTTCTTTCAGG +
Preference number: 5 (lower is better)
Translates to: RDPLDFWVRGKASNPTMIDTGPL*ATASFR
Trigger: CCTGAAAGAAGCTGTGGCCAATAAAGGCCCAGTGTC...AATCATTGTGGGATTGCTAGCTTTCCCTCTTACCCAGAAATCTAGAGGATCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483930.2
ENST00000680931.1
CDS-3UTR CAA 90 bp GCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCACTACACGTGGCGTTTaGAATCCTCTTCTGTACAAA +
Preference number: 5 (lower is better)
Translates to: APFLWVPGEHLLHDSLMITTRGV*NPLLYK
Trigger: TTTGTACAGAAGAGGATTCAAAACGCCACGTGTAGT...GATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp ATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGACTACACGTGGCGTTTaGAATCCTCTTCTGTACAAA +
Preference number: 5 (lower is better)
Translates to: ISAQHSLNLLGSRNLVPQTTRGV*NPLLYK
Trigger: TTTGTACAGAAGAGGATTCAAAACGCCACGTGTAGT...CTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp GCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCTGTTTAGATTCCTCTTaGTGTCCCTGTGCTTTTGGA +
Preference number: 5 (lower is better)
Translates to: APFLWVPGEHLLHDSLMICLDSS*CPCAFG
Trigger: TCCAAAAGCACAGGGACACAAAGAGGAATCTAAACA...GATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS TCA 90 bp ATGGTTCATAGTAGACACCATGGCTTTGTAGGGATAGGAAGCGTCTaGGTCGATGCCCTTGTTATCAATGATGTACTGGAAAGCCGTTGT +
Preference number: 5 (lower is better)
Translates to: MVHSRHHGFVGIGSV*VDALVINDVLESRC
Trigger: ACAACGGCTTTCCAGTACATCATTGATAACAAGGGCATCGACTCAGACGCTTCCTATCCCTACAAAGCCATGGTGTCTACTATGAACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680471.1
CDS-3UTR CAA 90 bp GAGTACAGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAGCACCACAAGAACCTaGATATTTCACTTCAGTAAC +
Preference number: 5 (lower is better)
Translates to: EYSGVISAQHSLNLLGSRSTTRT*IFHFSN
Trigger: GTTACTGAAGTGAAATATCAAGGTTCTTGTGGTGCT...CCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACTGTACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000368985.8
ENST00000483930.2
ENST00000679512.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR CAA 90 bp AAATTTAAAGTTCCTGCTGCCTGCTTAGATGCATCTACTAATCTAGAGCAGTTGGTTGATATGCCTGCCTaGGCCTCCCAAGTACTGGGA +
Preference number: 5 (lower is better)
Translates to: KFKVPAACLDASTNLEQLVDMPA*ASQVLG
Trigger: TCCCAGTACTTGGGAGGCCAAGGCAGGCATATCAAC...CAACTGCTCTAGATTAGTAGATGCATCTAAGCAGGCAGCAGGAACTTTAAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp AGAGATCCTCTAGATTTCTGGGTAAGAGGGAAAGCTAGCAATCCCACAATGATTCATAGCCTCAACCTCTaGGGTTCAAGGAATCTCGTG +
Preference number: 5 (lower is better)
Translates to: RDPLDFWVRGKASNPTMIHSLNL*GSRNLV
Trigger: CACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATG...AATCATTGTGGGATTGCTAGCTTTCCCTCTTACCCAGAAATCTAGAGGATCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR CAA 90 bp CATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAAACTATATTTTCTCATAGCCTCAACCTCTaGGGTTCAAGGAATCTCGTG +
Preference number: 5 (lower is better)
Translates to: HSLNLLGSRNLVPQTIFSHSLNL*GSRNLV
Trigger: CACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATG...AGAAAATATAGTTTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681444.1
CDS-3UTR CAA 90 bp AGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCTTTCTTCCATCAAAGTaGCTAAACCCCATCACCAGA +
Preference number: 5 (lower is better)
Translates to: SGVISAQHSLNLLGSRNLFLPSK*LNPITR
Trigger: TCTGGTGATGGGGTTTAGCAACTTTGATGGAAGAAA...GAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp CCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCTACACTACACGTGGCGTTTaGAATCCTCTTCTGTACAAA +
Preference number: 5 (lower is better)
Translates to: PFLWVPGEHLLHDSLMIYTTRGV*NPLLYK
Trigger: TTTGTACAGAAGAGGATTCAAAACGCCACGTGTAGT...GTAGATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp AGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGAAACAGTGGTTGGCTCAGTTATTaGCCAAATAAAGGCCCTGGT +
Preference number: 5 (lower is better)
Translates to: SFTRHEGLHKEIKAQRNSGWLSY*PNKGPG
Trigger: ACCAGGGCCTTTATTTGGCAAATAACTGAGCCAACC...ACTGTTTCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp GGTAAGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTATGAGCAGTGGAGTATaGGTTATTTTATTCTGGTTG +
Preference number: 5 (lower is better)
Translates to: GKDAPFLWVPGEHLLHDSMSSGV*VILFWL
Trigger: CAACCAGAATAAAATAACCAATACTCCACTGCTCAT...ACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS TCA 90 bp TTTCTCTCTCCAGTCCACAGAATCAGGCAATATCCGATTAGGGTTTaGCTTATATGTGATATTTCTCTGCCACTGGCTGGGAACTCTCAG +
Preference number: 5 (lower is better)
Translates to: FLSPVHRIRQYPIRV*LICDISLPLAGNSQ
Trigger: CTGAGAGTTCCCAGCCAGTGGCAGAGAAATATCACATATAAGTCAAACCCTAATCGGATATTGCCTGATTCTGTGGACTGGAGAGAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000472977.7
ENST00000480760.2
ENST00000483930.2
ENST00000607427.2
ENST00000679512.1
ENST00000679582.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
ENST00000681728.1
CDS-3UTR CAA 90 bp AGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCAGCACCACAAGAACCTaGATATTTCACTTCAGTAAC +
Preference number: 5 (lower is better)
Translates to: SGVISAQHSLNLLGSRNLSTTRT*IFHFSN
Trigger: GTTACTGAAGTGAAATATCAAGGTTCTTGTGGTGCT...GAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000368985.8
ENST00000483930.2
ENST00000679512.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR CAA 90 bp AAGGATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTTGGCAGCACGATATTTaGAGTCATATTGACATTTCT +
Preference number: 5 (lower is better)
Translates to: KDAPFLWVPGEHLLHDSLWQHDI*SHIDIS
Trigger: AGAAATGTCAATATGACTCAAAATATCGTGCTGCCA...AAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp GATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGTGGCAGCACGATATTTaGAGTCATATTGACATTTCT +
Preference number: 5 (lower is better)
Translates to: DAPFLWVPGEHLLHDSLMWQHDI*SHIDIS
Trigger: AGAAATGTCAATATGACTCAAAATATCGTGCTGCCA...CATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp AAATTTAAAGTTCCTGCTGCCTGCTTAGATGCATCTACTAATCTAGAGCAGTTGGACACTGGGCCTTTATaGGCCACAGCTTCTTTCAGG +
Preference number: 5 (lower is better)
Translates to: KFKVPAACLDASTNLEQLDTGPL*ATASFR
Trigger: CCTGAAAGAAGCTGTGGCCAATAAAGGCCCAGTGTC...CAACTGCTCTAGATTAGTAGATGCATCTAAGCAGGCAGCAGGAACTTTAAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp AATATAAGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGACCTTCTTCACCAAAGTaGTGGCCCCAGCTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: NISFTRHEGLHKEIKAQRPSSPK*WPQLFF
Trigger: GAAAAACAGCTGGGGCCACAACTTTGGTGAAGAAGG...TCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACTTATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp CCCACAATGATTTCCTTTATTTCTTGCCATCCGAATATATCCTTCTTCACCAAAGTTGATATGCCTGCCTaGGCCTCCCAAGTACTGGGA +
Preference number: 5 (lower is better)
Translates to: PTMISFISCHPNISFFTKVDMPA*ASQVLG
Trigger: TCCCAGTACTTGGGAGGCCAAGGCAGGCATATCAAC...TTTGGTGAAGAAGGATATATTCGGATGGCAAGAAATAAAGGAAATCATTGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483930.2
ENST00000680471.1
ENST00000680931.1
CDS-3UTR CAA 90 bp GTTTTTCACAAGCCAGTATTCTTTCCCATTAAGATCACCATAGCCAACCACAAGCATAGCCTCAACCTCTaGGGTTCAAGGAATCTCGTG +
Preference number: 5 (lower is better)
Translates to: VFHKPVFFPIKITIANHKHSLNL*GSRNLV
Trigger: CACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATG...CTTGTGGTTGGCTATGGTGATCTTAATGGGAAAGAATACTGGCTTGTGAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000483930.2
ENST00000680471.1
CDS-3UTR CAA 90 bp TTCTGGGTAAGAGGGAAAGCTAGCAATCCCACAATGATTTCCTTTATTTCTTGCCATAGCCTCAACCTCTaGGGTTCAAGGAATCTCGTG +
Preference number: 5 (lower is better)
Translates to: FWVRGKASNPTMISFISCHSLNL*GSRNLV
Trigger: CACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATG...GCAAGAAATAAAGGAAATCATTGTGGGATTGCTAGCTTTCCCTCTTACCCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR CAA 90 bp ATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCGTGCCTCAGATGAGCAGTGGAGTATaGGTTATTTTATTCTGGTTG +
Preference number: 5 (lower is better)
Translates to: ISAQHSLNLLGSRNLVPQMSSGV*VILFWL
Trigger: CAACCAGAATAAAATAACCAATACTCCACTGCTCAT...CTGAGGCACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp GATGCTCCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATGAGCAGTGGAGTATaGGTTATTTTATTCTGGTTG +
Preference number: 5 (lower is better)
Translates to: DAPFLWVPGEHLLHDSLMMSSGV*VILFWL
Trigger: CAACCAGAATAAAATAACCAATACTCCACTGCTCAT...CATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGGAGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp AGTATTGGTTATTTTATTCTGGTTGGCTCAGTTATTTGCCAAATAAAGGCCCTGTGTAATCTTAGCACTTaGGGAGGCTGGGGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: SIGYFILVGSVICQIKALCNLST*GGWGGW
Trigger: CCACCCACCCCAGCCTCCCAAAGTGCTAAGATTACA...CAGGGCCTTTATTTGGCAAATAACTGAGCCAACCAGAATAAAATAACCAATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp ATTCTGGTTGGCTCAGTTATTTGCCAAATAAAGGCCCTGGTCAAATTGTTGATGTGTGTCCCTGTGCTTTaGGAGGTAAGGATGCTCCTT +
Preference number: 5 (lower is better)
Translates to: ILVGSVICQIKALVKLLMCVPVL*EVRMLL
Trigger: AAGGAGCATCCTTACCTCCAAAAGCACAGGGACACA...CATCAACAATTTGACCAGGGCCTTTATTTGGCAAATAACTGAGCCAACCAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS TCA 90 bp ATATTGACATTTCTGATCCATGGCTTTGTAGGGATAGGAAGCGTCTaGGTCGATGCCCTTGTTATCAATGATGTACTGGAAAGCCGTTGT +
Preference number: 5 (lower is better)
Translates to: ILTFLIHGFVGIGSV*VDALVINDVLESRC
Trigger: ACAACGGCTTTCCAGTACATCATTGATAACAAGGGCATCGACTCAGACGCTTCCTATCCCTACAAAGCCATGGATCAGAAATGTCAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000483930.2
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
ENST00000681728.1
CDS GCA 90 bp TCAGGCAATATCCGATTAGGGTTTGACTTATATGTGATATTTCTCTaGCACTGGCTGGGAACTCTCAGGGAACTCATCAAAGACATCACT +
Preference number: 5 (lower is better)
Translates to: SGNIRLGFDLYVIFL*HWLGTLRELIKDIT
Trigger: AGTGATGTCTTTGATGAGTTCCCTGAGAGTTCCCAGCCAGTGGCAGAGAAATATCACATATAAGTCAAACCCTAATCGGATATTGCCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000472977.7
ENST00000480760.2
ENST00000483930.2
ENST00000607427.2
ENST00000679512.1
ENST00000679582.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
ENST00000681728.1
CDS-3UTR CAA 90 bp GTAAGAGGGAAAGCTAGCAATCCCACAATGATTTCCTTTATTTCTTGCCATCCGTCTGAGTCGATGCCCTaGTTATCAATGATGTACTGG +
Preference number: 5 (lower is better)
Translates to: VRGKASNPTMISFISCHPSESMP*LSMMYW
Trigger: CCAGTACATCATTGATAACAAGGGCATCGACTCAGA...CGGATGGCAAGAAATAAAGGAAATCATTGTGGGATTGCTAGCTTTCCCTCTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR CAA 90 bp AGTGGTGTGATCTCAGCTCAACATAGCCTCAACCTCTTGGGTTCAAGGAATCTCTGGCAGCACGATATTTaGAGTCATATTGACATTTCT +
Preference number: 5 (lower is better)
Translates to: SGVISAQHSLNLLGSRNLWQHDI*SHIDIS
Trigger: AGAAATGTCAATATGACTCAAAATATCGTGCTGCCA...GAGATTCCTTGAACCCAAGAGGTTGAGGCTATGTTGAGCTGAGATCACACCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000483930.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
CDS-3UTR CAA 90 bp AAATTTAAAGTTCCTGCTGCCTGCTTAGATGCATCTACTAATCTAGAGCAGTTGCATAGCCTCAACCTCTaGGGTTCAAGGAATCTCGTG +
Preference number: 5 (lower is better)
Translates to: KFKVPAACLDASTNLEQLHSLNL*GSRNLV
Trigger: CACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATG...CAACTGCTCTAGATTAGTAGATGCATCTAAGCAGGCAGCAGGAACTTTAAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp CCTTTTCTCTGGGTGCCAGGAGAGCACCTCTTACATGACAGTCTTATGATCTACATGAGCAGTGGAGTATaGGTTATTTTATTCTGGTTG +
Preference number: 5 (lower is better)
Translates to: PFLWVPGEHLLHDSLMIYMSSGV*VILFWL
Trigger: CAACCAGAATAAAATAACCAATACTCCACTGCTCAT...GTAGATCATAAGACTGTCATGTAAGAGGTGCTCTCCTGGCACCCAGAGAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp AATATAAGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGAATGAGTGCATTCCCATaGAATGCTCCAGGTTGTGAA +
Preference number: 5 (lower is better)
Translates to: NISFTRHEGLHKEIKAQRMSAFP*NAPGCE
Trigger: TTCACAACCTGGAGCATTCAATGGGAATGCACTCAT...TCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACTTATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp AGAGGGAAAGCTAGCAATCCCACAATGATTTCCTTTATTTCTTGCCATCCGAATATGAGTGCATTCCCATaGAATGCTCCAGGTTGTGAA +
Preference number: 5 (lower is better)
Translates to: RGKASNPTMISFISCHPNMSAFP*NAPGCE
Trigger: TTCACAACCTGGAGCATTCAATGGGAATGCACTCAT...ATTCGGATGGCAAGAAATAAAGGAAATCATTGTGGGATTGCTAGCTTTCCCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR CAA 90 bp ATTCTGGTTGGCTCAGTTATTTGCCAAATAAAGGCCCTGGTCAAATTGTTGATGGAAGTTCAGTGTACTTaGAACATGTGGCAGCACGAT +
Preference number: 5 (lower is better)
Translates to: ILVGSVICQIKALVKLLMEVQCT*NMWQHD
Trigger: ATCGTGCTGCCACATGTTCAAAGTACACTGAACTTC...CATCAACAATTTGACCAGGGCCTTTATTTGGCAAATAACTGAGCCAACCAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp AATATAAGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGAGAAGTTCAGTGTACTTaGAACATGTGGCAGCACGAT +
Preference number: 5 (lower is better)
Translates to: NISFTRHEGLHKEIKAQREVQCT*NMWQHD
Trigger: ATCGTGCTGCCACATGTTCAAAGTACACTGAACTTC...TCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACTTATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp AGTATTGGTTATTTTATTCTGGTTGGCTCAGTTATTTGCCAAATAAAGGCCCTGCATAGCCTCAACCTCTaGGGTTCAAGGAATCTCGTG +
Preference number: 5 (lower is better)
Translates to: SIGYFILVGSVICQIKALHSLNL*GSRNLV
Trigger: CACGAGATTCCTTGAACCCAAGAGGTTGAGGCTATG...CAGGGCCTTTATTTGGCAAATAACTGAGCCAACCAGAATAAAATAACCAATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS-3UTR CAA 90 bp AGTATTGGTTATTTTATTCTGGTTGGCTCAGTTATTTGCCAAATAAAGGCCCTGTGTGTCCCTGTGCTTTaGGAGGTAAGGATGCTCCTT +
Preference number: 5 (lower is better)
Translates to: SIGYFILVGSVICQIKALCVPVL*EVRMLL
Trigger: AAGGAGCATCCTTACCTCCAAAAGCACAGGGACACA...CAGGGCCTTTATTTGGCAAATAACTGAGCCAACCAGAATAAAATAACCAATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS CCA 90 bp AATATCCGATTAGGGTTTGACTTATATGTGATATTTCTCTGCCACTaGCTGGGAACTCTCAGGGAACTCATCAAAGACATCACTTCTTCA +
Preference number: 5 (lower is better)
Translates to: NIRLGFDLYVIFLCH*LGTLRELIKDITSS
Trigger: TGAAGAAGTGATGTCTTTGATGAGTTCCCTGAGAGTTCCCAGCCAGTGGCAGAGAAATATCACATATAAGTCAAACCCTAATCGGATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000472977.7
ENST00000480760.2
ENST00000483930.2
ENST00000607427.2
ENST00000679512.1
ENST00000679582.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
ENST00000681728.1
CDS CCA 90 bp GGACATCTTCTCTGCCATAAGGAAGTTCAGTGTACTTTGAACATGTaGCAGCACGATATTTTGAGTCATATTGACATTTCTGATCCATGG +
Preference number: 5 (lower is better)
Translates to: GHLLCHKEVQCTLNM*QHDILSHIDISDPW
Trigger: CCATGGATCAGAAATGTCAATATGACTCAAAATATCGTGCTGCCACATGTTCAAAGTACACTGAACTTCCTTATGGCAGAGAAGATGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000483930.2
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
ENST00000681728.1
CDS-3UTR CAA 90 bp AAAAGGAGAGATCCTCTAGATTTCTGGGTAAGAGGGAAAGCTAGCAATCCCACATGGCAGCACGATATTTaGAGTCATATTGACATTTCT +
Preference number: 5 (lower is better)
Translates to: KRRDPLDFWVRGKASNPTWQHDI*SHIDIS
Trigger: AGAAATGTCAATATGACTCAAAATATCGTGCTGCCA...TGTGGGATTGCTAGCTTTCCCTCTTACCCAGAAATCTAGAGGATCTCTCCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483930.2
ENST00000680931.1
CDS-3UTR CAA 90 bp GCTAGCAATCCCACAATGATTTCCTTTATTTCTTGCCATCCGAATATATCCTTCGAAGTTCAGTGTACTTaGAACATGTGGCAGCACGAT +
Preference number: 5 (lower is better)
Translates to: ASNPTMISFISCHPNISFEVQCT*NMWQHD
Trigger: ATCGTGCTGCCACATGTTCAAAGTACACTGAACTTC...GAAGGATATATTCGGATGGCAAGAAATAAAGGAAATCATTGTGGGATTGCTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483930.2
ENST00000680931.1
CDS-3UTR CAA 90 bp AATATAAGTTTTACACGACACGAGGGGCTCCATAAGGAAATAAAGGCCCAAAGAAGCACCACAAGAACCTaGATATTTCACTTCAGTAAC +
Preference number: 5 (lower is better)
Translates to: NISFTRHEGLHKEIKAQRSTTRT*IFHFSN
Trigger: GTTACTGAAGTGAAATATCAAGGTTCTTGTGGTGCT...TCTTTGGGCCTTTATTTCCTTATGGAGCCCCTCGTGTCGTGTAAAACTTATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000607427.2
ENST00000679512.1
ENST00000680664.1
CDS-3UTR CAA 90 bp ATTCTGGTTGGCTCAGTTATTTGCCAAATAAAGGCCCTGGTCAAATTGTTGATGAGCACCACAAGAACCTaGATATTTCACTTCAGTAAC +
Preference number: 5 (lower is better)
Translates to: ILVGSVICQIKALVKLLMSTTRT*IFHFSN
Trigger: GTTACTGAAGTGAAATATCAAGGTTCTTGTGGTGCT...CATCAACAATTTGACCAGGGCCTTTATTTGGCAAATAACTGAGCCAACCAGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000680664.1
CDS-3UTR CAA 90 bp TTCTGGGTAAGAGGGAAAGCTAGCAATCCCACAATGATTTCCTTTATTTCTTGCAGCACCACAAGAACCTaGATATTTCACTTCAGTAAC +
Preference number: 5 (lower is better)
Translates to: FWVRGKASNPTMISFISCSTTRT*IFHFSN
Trigger: GTTACTGAAGTGAAATATCAAGGTTCTTGTGGTGCT...GCAAGAAATAAAGGAAATCATTGTGGGATTGCTAGCTTTCCCTCTTACCCAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR CAA 90 bp AATCCCACAATGATTTCCTTTATTTCTTGCCATCCGAATATATCCTTCTTCACCTCTGAGTCGATGCCCTaGTTATCAATGATGTACTGG +
Preference number: 5 (lower is better)
Translates to: NPTMISFISCHPNISFFTSESMP*LSMMYW
Trigger: CCAGTACATCATTGATAACAAGGGCATCGACTCAGA...GGTGAAGAAGGATATATTCGGATGGCAAGAAATAAAGGAAATCATTGTGGGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483930.2
ENST00000680471.1
ENST00000680931.1
CDS-3UTR CAA 90 bp GTAAGAGGGAAAGCTAGCAATCCCACAATGATTTCCTTTATTTCTTGCCATCCGTGGCAGCACGATATTTaGAGTCATATTGACATTTCT +
Preference number: 5 (lower is better)
Translates to: VRGKASNPTMISFISCHPWQHDI*SHIDIS
Trigger: AGAAATGTCAATATGACTCAAAATATCGTGCTGCCA...CGGATGGCAAGAAATAAAGGAAATCATTGTGGGATTGCTAGCTTTCCCTCTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483930.2
ENST00000680931.1
CDS-3UTR CAA 90 bp CCCACAATGATTTCCTTTATTTCTTGCCATCCGAATATATCCTTCTTCACCAAAGAAGTTCAGTGTACTTaGAACATGTGGCAGCACGAT +
Preference number: 5 (lower is better)
Translates to: PTMISFISCHPNISFFTKEVQCT*NMWQHD
Trigger: ATCGTGCTGCCACATGTTCAAAGTACACTGAACTTC...TTTGGTGAAGAAGGATATATTCGGATGGCAAGAAATAAAGGAAATCATTGTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483930.2
ENST00000680931.1
CDS-3UTR CAA 90 bp GTTATAAAAAGGAGAGATCCTCTAGATTTCTGGGTAAGAGGGAAAGCTAGCAATAGCACCACAAGAACCTaGATATTTCACTTCAGTAAC +
Preference number: 5 (lower is better)
Translates to: VIKRRDPLDFWVRGKASNSTTRT*IFHFSN
Trigger: GTTACTGAAGTGAAATATCAAGGTTCTTGTGGTGCT...ATTGCTAGCTTTCCCTCTTACCCAGAAATCTAGAGGATCTCTCCTTTTTATAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000483930.2
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
CDS-3UTR CAA 90 bp AGTATTGGTTATTTTATTCTGGTTGGCTCAGTTATTTGCCAAATAAAGGCCCTGATGAGCAGTGGAGTATaGGTTATTTTATTCTGGTTG +
Preference number: 5 (lower is better)
Translates to: SIGYFILVGSVICQIKALMSSGV*VILFWL
Trigger: CAACCAGAATAAAATAACCAATACTCCACTGCTCAT...CAGGGCCTTTATTTGGCAAATAACTGAGCCAACCAGAATAAAATAACCAATACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368985.8
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
CDS GCA 72 bp GTGATCCAGGGTAGGATCTTTATGCAACTGTGCCACTaGAGAGGAGCACACCAAGAGCACACAAACCAGCCG +
Preference number: 6 (lower is better)
Translates to: VIQGRIFMQLCH*RGAHQEHTNQP
Trigger: CGGCTGGTTTGTGTGCTCTTGGTGTGCTCCTCTGCAGTGGCACAGTTGCATAAAGATCCTACCCTGGATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000472977.7
ENST00000480760.2
ENST00000483930.2
ENST00000607427.2
ENST00000679512.1
ENST00000679582.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680466.1
ENST00000680471.1
ENST00000680931.1
ENST00000681444.1
ENST00000681728.1
ENST00000681863.1
CDS CCA 72 bp GCCCAGCAAGCACCACAAGAACCCATGTCTCCCAGGTaGTTCATGCCCAGATCGTATGAGTGCATTCCCATT +
Preference number: 6 (lower is better)
Translates to: AQQAPQEPMSPR*FMPRSYECIPI
Trigger: AATGGGAATGCACTCATACGATCTGGGCATGAACCACCTGGGAGACATGGGTTCTTGTGGTGCTTGCTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680288.1
CDS TCA 72 bp TGGCCCCAGCATGGCTTTGTAGGGATAGGAAGCGTCTaGGTCGATGCCCTTGTTATCAATGATGTACTGGAA +
Preference number: 6 (lower is better)
Translates to: WPQHGFVGIGSV*VDALVINDVLE
Trigger: TTCCAGTACATCATTGATAACAAGGGCATCGACTCAGACGCTTCCTATCCCTACAAAGCCATGCTGGGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680311.1
CDS TCA 72 bp GCCACCATTGCAGCCTTTGTTTCCATATTTTTCAGTTaGGCAATCCACCAGGTTCTGGGCACTGAGAGACAC +
Preference number: 6 (lower is better)
Translates to: ATIAAFVSIFFS*AIHQVLGTERH
Trigger: GTGTCTCTCAGTGCCCAGAACCTGGTGGATTGCTCAACTGAAAAATATGGAAACAAAGGCTGCAATGGTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000368985.8
ENST00000472977.7
ENST00000483930.2
ENST00000607427.2
ENST00000679512.1
ENST00000679582.1
ENST00000679898.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
ENST00000681728.1
CDS TCA 72 bp AAGACGCACCATGGCTTTGTAGGGATAGGAAGCGTCTaGGTCGATGCCCTTGTTATCAATGATGTACTGGAA +
Preference number: 6 (lower is better)
Translates to: KTHHGFVGIGSV*VDALVINDVLE
Trigger: TTCCAGTACATCATTGATAACAAGGGCATCGACTCAGACGCTTCCTATCCCTACAAAGCCATGGTGCGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679582.1
CDS CCA 72 bp AAAGACATCACTTCTTCACTGGTCATGTCTCCCAGGTaGTTCATGCCCAGATCGTATGAGTGCATTCCCATT +
Preference number: 6 (lower is better)
Translates to: KDITSSLVMSPR*FMPRSYECIPI
Trigger: AATGGGAATGCACTCATACGATCTGGGCATGAACCACCTGGGAGACATGACCAGTGAAGAAGTGATGTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000472977.7
ENST00000480760.2
ENST00000483930.2
ENST00000607427.2
ENST00000679512.1
ENST00000679582.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
ENST00000681728.1
CDS TCA 72 bp CCAGTCCACAGAATCAGGCAATATCCGATTAGGGTTTaGCTTATATGTGATATTTCTCTGCCACTGGCTGGG +
Preference number: 6 (lower is better)
Translates to: PVHRIRQYPIRV*LICDISLPLAG
Trigger: CCCAGCCAGTGGCAGAGAAATATCACATATAAGTCAAACCCTAATCGGATATTGCCTGATTCTGTGGACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000472977.7
ENST00000480760.2
ENST00000483930.2
ENST00000607427.2
ENST00000679512.1
ENST00000679582.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
ENST00000681728.1
CDS TCA 72 bp AGTAGACACCATGGCTTTGTAGGGATAGGAAGCGTCTaGGTCGATGCCCTTGTTATCAATGATGTACTGGAA +
Preference number: 6 (lower is better)
Translates to: SRHHGFVGIGSV*VDALVINDVLE
Trigger: TTCCAGTACATCATTGATAACAAGGGCATCGACTCAGACGCTTCCTATCCCTACAAAGCCATGGTGTCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680471.1
CDS CAA 72 bp GGTGGTTCATGCCCAGATCGTATGAGTGCATTCCCATaGAATGCTCCAGGTTGTGAAGCATCACAAACTTTA +
Preference number: 6 (lower is better)
Translates to: GGSCPDRMSAFP*NAPGCEASQTL
Trigger: TAAAGTTTGTGATGCTTCACAACCTGGAGCATTCAATGGGAATGCACTCATACGATCTGGGCATGAACCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000472977.7
ENST00000480760.2
ENST00000483930.2
ENST00000607427.2
ENST00000679512.1
ENST00000679582.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
ENST00000681728.1
ENST00000681863.1
CDS CAA 72 bp GTGGATAACATGAGATCATGGGGCAGCACAAAAAGTTaGCTTAAGACGCACCATGGCTTTGTAGGGATAGGA +
Preference number: 6 (lower is better)
Translates to: VDNMRSWGSTKS*LKTHHGFVGIG
Trigger: TCCTATCCCTACAAAGCCATGGTGCGTCTTAAGCAAACTTTTTGTGCTGCCCCATGATCTCATGTTATCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679582.1
CDS TCA 72 bp CCTAGGGTTCAGAGGCTTGGGATGGTAATACTCACTTaGTATTTCACTTCAGTAACACACCCTTTCTCTCTC +
Preference number: 6 (lower is better)
Translates to: PRVQRLGMVILT*YFTSVTHPFSL
Trigger: GAGAGAGAAAGGGTGTGTTACTGAAGTGAAATATCAAGTGAGTATTACCATCCCAAGCCTCTGAACCCTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480760.2
CDS CCA 72 bp CTAGTACAGTCACCTCTAGTCATTTCCCTATGGTCTTaGGGACAAAGTGGATACAGTAAGCCATCAAGAAGA +
Preference number: 6 (lower is better)
Translates to: LVQSPLVISLWS*GQSGYSKPSRR
Trigger: TCTTCTTGATGGCTTACTGTATCCACTTTGTCCCCAAGACCATAGGGAAATGACTAGAGGTGACTGTACTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680288.1
CDS CAA 72 bp TTTCTTGCCATCCGAATATATCCTTCTTCACCAAAGTaGTGGCCCCAGCACTTCTGTAGAGGAAGAAAGAAG +
Preference number: 6 (lower is better)
Translates to: FLAIRIYPSSPK*WPQHFCRGRKK
Trigger: CTTCTTTCTTCCTCTACAGAAGTGCTGGGGCCACAACTTTGGTGAAGAAGGATATATTCGGATGGCAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679512.1
CDS GCA 72 bp ATCCGATTAGGGTTTGACTTATATGTGATATTTCTCTaGCACTGGCTGGGAACTCTCAGGGAACTCATCAAA +
Preference number: 6 (lower is better)
Translates to: IRLGFDLYVIFL*HWLGTLRELIK
Trigger: TTTGATGAGTTCCCTGAGAGTTCCCAGCCAGTGGCAGAGAAATATCACATATAAGTCAAACCCTAATCGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000472977.7
ENST00000480760.2
ENST00000483930.2
ENST00000607427.2
ENST00000679512.1
ENST00000679582.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
ENST00000681728.1
CDS GCA 72 bp CTTTATTGGCCACAGCTTCTTTCAGGACATCTTCTCTaGCATAAGGAAGTTCAGTGTACTTTGAACATGTGG +
Preference number: 6 (lower is better)
Translates to: LYWPQLLSGHLL*HKEVQCTLNMW
Trigger: CCACATGTTCAAAGTACACTGAACTTCCTTATGGCAGAGAAGATGTCCTGAAAGAAGCTGTGGCCAATAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000472977.7
ENST00000483930.2
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
ENST00000681728.1
CDS CCA 72 bp TTAGGGTTTGACTTATATGTGATATTTCTCTGCCACTaGCTGGGAACTCTCAGGGAACTCATCAAAGACATC +
Preference number: 6 (lower is better)
Translates to: LGFDLYVIFLCH*LGTLRELIKDI
Trigger: GATGTCTTTGATGAGTTCCCTGAGAGTTCCCAGCCAGTGGCAGAGAAATATCACATATAAGTCAAACCCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000472977.7
ENST00000480760.2
ENST00000483930.2
ENST00000607427.2
ENST00000679512.1
ENST00000679582.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
ENST00000681728.1
CDS TCA 72 bp TCGTATGAGTGCATTCCCATTGAATGCTCCAGGTTGTaGAGCATCACAAACTTTAGATTCTTTTCCCAGATG +
Preference number: 6 (lower is better)
Translates to: SYECIPIECSRL*SITNFRFFSQM
Trigger: CATCTGGGAAAAGAATCTAAAGTTTGTGATGCTTCACAACCTGGAGCATTCAATGGGAATGCACTCATACGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000472977.7
ENST00000480760.2
ENST00000483930.2
ENST00000607427.2
ENST00000679512.1
ENST00000679582.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
ENST00000681728.1
ENST00000681863.1
CDS TCA 72 bp TGTGAAGCATCACAAACTTTAGATTCTTTTCCCAGATaGGACGTCGTACTGCTTCTTCATTGTGATAGAACC +
Preference number: 6 (lower is better)
Translates to: CEASQTLDSFPR*DVVLLLHCDRT
Trigger: GGTTCTATCACAATGAAGAAGCAGTACGACGTCTCATCTGGGAAAAGAATCTAAAGTTTGTGATGCTTCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680664.1
CDS CAA 72 bp GGACATCTTCTCTGCCATAAGGAAGTTCAGTGTACTTaGAACATGTGGCAGCACGATATTTTGAGTCATATT +
Preference number: 6 (lower is better)
Translates to: GHLLCHKEVQCT*NMWQHDILSHI
Trigger: AATATGACTCAAAATATCGTGCTGCCACATGTTCAAAGTACACTGAACTTCCTTATGGCAGAGAAGATGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000472977.7
ENST00000483930.2
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
ENST00000681728.1
CDS CAA 90 bp CTTCTTTCAGGACATCTTCTCTGCCATAAGGAAGTTCAGTGTACTTaGAACATGTGGCAGCACGATATTTTGAGTCATATTGACATTTCT +
Preference number: 6 (lower is better)
Translates to: LLSGHLLCHKEVQCT*NMWQHDILSHIDIS
Trigger: AGAAATGTCAATATGACTCAAAATATCGTGCTGCCACATGTTCAAAGTACACTGAACTTCCTTATGGCAGAGAAGATGTCCTGAAAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000472977.7
ENST00000483930.2
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
ENST00000681728.1
CDS TCA 72 bp TGTGAAGCATCACAAACTTTAGATTCTTTTCCCAGATaGGACGTCGTACTGCTTCTTCATTCTTTTCCTTGT +
Preference number: 6 (lower is better)
Translates to: CEASQTLDSFPR*DVVLLLHSFPC
Trigger: ACAAGGAAAAGAATGAAGAAGCAGTACGACGTCTCATCTGGGAAAAGAATCTAAAGTTTGTGATGCTTCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000472977.7
ENST00000480760.2
ENST00000483930.2
ENST00000607427.2
ENST00000679512.1
ENST00000679582.1
ENST00000680288.1
ENST00000680311.1
ENST00000680471.1
ENST00000680931.1
ENST00000681444.1
ENST00000681728.1
ENST00000681863.1
CDS CCA 72 bp CTCTGCCATAAGGAAGTTCAGTGTACTTTGAACATGTaGCAGCACGATATTTTGAGTCATATTGACATTTCT +
Preference number: 6 (lower is better)
Translates to: LCHKEVQCTLNM*QHDILSHIDIS
Trigger: AGAAATGTCAATATGACTCAAAATATCGTGCTGCCACATGTTCAAAGTACACTGAACTTCCTTATGGCAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000368985.8
ENST00000448301.7
ENST00000472977.7
ENST00000483930.2
ENST00000607427.2
ENST00000679512.1
ENST00000679898.1
ENST00000680288.1
ENST00000680664.1
ENST00000680931.1
ENST00000681444.1
ENST00000681728.1
CDS CAA 72 bp GTTCAGTGTACTTTGAACATGTGGCAGCACGATATTTaGAGTCATATTGACATTTCTGATCTTGATATTTCA +
Preference number: 6 (lower is better)
Translates to: VQCTLNMWQHDI*SHIDISDLDIS
Trigger: TGAAATATCAAGATCAGAAATGTCAATATGACTCAAAATATCGTGCTGCCACATGTTCAAAGTACACTGAAC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448301.7