Pregenerated sensors for CTSL (Homo sapiens)
Ensembl gene IDs: ENSG00000135047Ensembl transcript IDs: ENST00000340342.11, ENST00000342020.6, ENST00000343150.10, ENST00000482054.2, ENST00000495822.2, ENST00000676466.1, ENST00000676480.1, ENST00000676531.1, ENST00000676576.1, ENST00000676769.1, ENST00000676881.1, ENST00000676909.1, ENST00000676961.1, ENST00000677019.1, ENST00000677262.1, ENST00000677345.1, ENST00000677349.1, ENST00000677523.1, ENST00000677615.1, ENST00000677638.1, ENST00000677761.1, ENST00000677821.1, ENST00000677864.1, ENST00000677935.1, ENST00000677955.1, ENST00000678259.1, ENST00000678367.1, ENST00000678442.1, ENST00000678596.1, ENST00000678599.1, ENST00000678649.1, ENST00000678654.1, ENST00000678752.1, ENST00000678965.1, ENST00000679025.1, ENST00000679028.1, ENST00000679141.1, ENST00000679149.1, ENST00000679157.1, ENST00000679252.1
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CCATCTTTACGTAGCCACCCATGCCCCATTCTTCACCCCAGCTGTTCTTCACCACTTAAGCCATCTGCCTaGCTCAGCCTCCTAAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: PSLRSHPCPILHPSCSSPLKPSA*LSLLKG Trigger: GCCCTTTAGGAGGCTGAGCCAGGCAGATGGCTTAAG...TGGTGAAGAACAGCTGGGGTGAAGAATGGGGCATGGGTGGCTACGTAAAGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000679025.1 |
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| 3UTR-3UTR TCA 90 bp | CCATCTTTACGTAGCCACCCATGCCCCATTCTTCACCCCAGCTGTTCTTCACCACTGGGCTTACGGTTTTaGAAGCCATTCATCACCTGC | + |
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Preference number: 2 (lower is better) Translates to: PSLRSHPCPILHPSCSSPLGLRF*KPFITC Trigger: GCAGGTGATGAATGGCTTTCAAAACCGTAAGCCCAG...TGGTGAAGAACAGCTGGGGTGAAGAATGGGGCATGGGTGGCTACGTAAAGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000677955.1 ENST00000678259.1 ENST00000678367.1 ENST00000679028.1 |
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| 3UTR-3UTR TCA 90 bp | CCATCTTTACGTAGCCACCCATGCCCCATTCTTCACCCCAGCTGTTCTTCACCACACTCGGATCTTCAATaGTTCGAGTGTGTATCCGAC | + |
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Preference number: 2 (lower is better) Translates to: PSLRSHPCPILHPSCSSPHSDLQ*FECVSD Trigger: GTCGGATACACACTCGAATCATTGAAGATCCGAGTG...TGGTGAAGAACAGCTGGGGTGAAGAATGGGGCATGGGTGGCTACGTAAAGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000677523.1 ENST00000677955.1 ENST00000678259.1 ENST00000678367.1 ENST00000679025.1 ENST00000679028.1 |
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| 3UTR-3UTR CCA 90 bp | CCATCTTTACGTAGCCACCCATGCCCCATTCTTCACCCCAGCTGTTCTTCACCATTCTGTTGCCTCATATaGATAGGATTCCTCAGAGTC | + |
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Preference number: 2 (lower is better) Translates to: PSLRSHPCPILHPSCSSPFCCLI*IGFLRV Trigger: GACTCTGAGGAATCCTATCCATATGAGGCAACAGAA...TGGTGAAGAACAGCTGGGGTGAAGAATGGGGCATGGGTGGCTACGTAAAGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000677955.1 ENST00000678259.1 ENST00000678367.1 ENST00000679028.1 |
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| 3UTR-3UTR GCA 90 bp | CCATCTTTACGTAGCCACCCATGCCCCATTCTTCACCCCAGCTGTTCTTCACCAACAGGATTCTTCTGTTaGCTCATATGGATAGGATTC | + |
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Preference number: 2 (lower is better) Translates to: PSLRSHPCPILHPSCSSPTGFFC*LIWIGF Trigger: GAATCCTATCCATATGAGGCAACAGAAGAATCCTGT...TGGTGAAGAACAGCTGGGGTGAAGAATGGGGCATGGGTGGCTACGTAAAGATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000677955.1 ENST00000678259.1 ENST00000678367.1 ENST00000679028.1 |
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| 3UTR-3UTR GCA 90 bp | CCATCTTTACGTAGCCACCCATGCCCCATTCTTCACCCCAGCTGTTCTTCACCAGAAGGACTCATGACCTaGATCAATAGCAACAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: PSLRSHPCPILHPSCSSPEGLMT*INSNRN Trigger: ATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTC...TGGTGAAGAACAGCTGGGGTGAAGAATGGGGCATGGGTGGCTACGTAAAGATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000677523.1 ENST00000677955.1 ENST00000678259.1 ENST00000678367.1 ENST00000679025.1 ENST00000679028.1 |
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| 3UTR-3UTR TCA 90 bp | TTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATGGGCCCCTGGGCTTACGGTTTTaGAAGCCATTCATCACCTGC | + |
|
Preference number: 2 (lower is better) Translates to: FIEQEGLMTCINSNRNGPLGLRF*KPFITC Trigger: GCAGGTGATGAATGGCTTTCAAAACCGTAAGCCCAG...GGGCCCATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000677638.1 ENST00000677955.1 ENST00000678259.1 ENST00000678367.1 ENST00000679028.1 |
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| 3UTR-3UTR TCA 90 bp | GGGATTGTACTTACAGGATTCTTCCTCAGCATAGCTGGGACCACAGACGCACACCCCAGCCCTAATATATaGATTCCGAAAAAGGTATCT | + |
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Preference number: 2 (lower is better) Translates to: GIVLTGFFLSIAGTTDAHPSPNI*IPKKVS Trigger: AGATACCTTTTTCGGAATTCATATATTAGGGCTGGG...GTGTGCGTCTGTGGTCCCAGCTATGCTGAGGAAGAATCCTGTAAGTACAATCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000679025.1 |
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| 3UTR-3UTR TCA 90 bp | TTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATGGGCCCCACTCGGATCTTCAATaGTTCGAGTGTGTATCCGAC | + |
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Preference number: 2 (lower is better) Translates to: FIEQEGLMTCINSNRNGPHSDLQ*FECVSD Trigger: GTCGGATACACACTCGAATCATTGAAGATCCGAGTG...GGGCCCATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000677523.1 ENST00000677638.1 ENST00000677955.1 ENST00000678259.1 ENST00000678367.1 ENST00000679025.1 ENST00000679028.1 |
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| 3UTR-3UTR CCA 90 bp | TTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATGGGCCCTCCAATCCACAGATCTaGGGGCCTCATAAAACAGAG | + |
|
Preference number: 2 (lower is better) Translates to: FIEQEGLMTCINSNRNGPSNPQI*GPHKTE Trigger: CTCTGTTTTATGAGGCCCCCAGATCTGTGGATTGGA...GGGCCCATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000677638.1 ENST00000677955.1 ENST00000678259.1 ENST00000678367.1 ENST00000679028.1 |
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| 3UTR-3UTR TCA 90 bp | GCCTTCTTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATCACTCGGATCTTCAATaGTTCGAGTGTGTATCCGAC | + |
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Preference number: 2 (lower is better) Translates to: AFFIEQEGLMTCINSNRNHSDLQ*FECVSD Trigger: GTCGGATACACACTCGAATCATTGAAGATCCGAGTG...ATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAAGAAGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000677523.1 ENST00000677955.1 ENST00000678259.1 ENST00000678367.1 ENST00000679025.1 ENST00000679028.1 |
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| 3UTR-3UTR CCA 90 bp | GCCTTCTTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATTCCAATCCACAGATCTaGGGGCCTCATAAAACAGAG | + |
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Preference number: 2 (lower is better) Translates to: AFFIEQEGLMTCINSNRNSNPQI*GPHKTE Trigger: CTCTGTTTTATGAGGCCCCCAGATCTGTGGATTGGA...ATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAAGAAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000677955.1 ENST00000678259.1 ENST00000678367.1 ENST00000679028.1 |
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| 3UTR-3UTR CCA 90 bp | TTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATGGGCCCTTCTGTTGCCTCATATaGATAGGATTCCTCAGAGTC | + |
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Preference number: 2 (lower is better) Translates to: FIEQEGLMTCINSNRNGPFCCLI*IGFLRV Trigger: GACTCTGAGGAATCCTATCCATATGAGGCAACAGAA...GGGCCCATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000677638.1 ENST00000677955.1 ENST00000678259.1 ENST00000678367.1 ENST00000679028.1 |
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| 3UTR-3UTR GCA 90 bp | TTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATGGGCCCACAGGATTCTTCTGTTaGCTCATATGGATAGGATTC | + |
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Preference number: 2 (lower is better) Translates to: FIEQEGLMTCINSNRNGPTGFFC*LIWIGF Trigger: GAATCCTATCCATATGAGGCAACAGAAGAATCCTGT...GGGCCCATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000677638.1 ENST00000677955.1 ENST00000678259.1 ENST00000678367.1 ENST00000679028.1 |
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| 3UTR CCA 72 bp | TGGGATTGTACTTACAGGATTCTTCCTCAGCATAGCTaGGACCACAGACGCACACCACCACAGCCGGCTAAT | + |
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Preference number: 3 (lower is better) Translates to: WDCTYRILPQHS*DHRRTPPQPAN Trigger: ATTAGCCGGCTGTGGTGGTGTGCGTCTGTGGTCCCAGCTATGCTGAGGAAGAATCCTGTAAGTACAATCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000679025.1 |
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| 3UTR-3UTR CAA 90 bp | TTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATGGGCCCTACAGGATTCTTCTGTaGCCTCATATGGATAGGATT | + |
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Preference number: 3 (lower is better) Translates to: FIEQEGLMTCINSNRNGPYRILL*PHMDRI Trigger: AATCCTATCCATATGAGGCAACAGAAGAATCCTGTA...GGGCCCATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000677638.1 ENST00000677955.1 ENST00000678259.1 ENST00000678367.1 ENST00000679028.1 |
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| CDS-3UTR GCA 90 bp | CCATCTTTACGTAGCCACCCATGCCCCATTCTTCACCCCAGCTGTTCTTCACCAGGCGCACTCCACGGATaGCGCTCAAGGTTGCGGAGG | + |
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Preference number: 4 (lower is better) Translates to: PSLRSHPCPILHPSCSSPGALHG*RSRLRR Trigger: CCTCCGCAACCTTGAGCGGCATCCGTGGAGTGCGCC...TGGTGAAGAACAGCTGGGGTGAAGAATGGGGCATGGGTGGCTACGTAAAGATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000678367.1 |
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| CDS-3UTR CCA 90 bp | CCATCTTTACGTAGCCACCCATGCCCCATTCTTCACCCCAGCTGTTCTTCACCACTCTGTGGCCCAGGCTaGAGTTCAACGGCGCGATAT | + |
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Preference number: 4 (lower is better) Translates to: PSLRSHPCPILHPSCSSPLCGPG*SSTARY Trigger: ATATCGCGCCGTTGAACTCCAGCCTGGGCCACAGAG...TGGTGAAGAACAGCTGGGGTGAAGAATGGGGCATGGGTGGCTACGTAAAGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000679028.1 |
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| CDS-3UTR GCA 90 bp | TTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATGGGCCCGCGGCGCTTTCCTGCTaGGGTCGTAGCTGCGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: FIEQEGLMTCINSNRNGPAALSC*GRSCAG Trigger: GCCTGCGCAGCTACGACCGCAGCAGGAAAGCGCCGC...GGGCCCATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000678367.1 |
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| CDS-3UTR GCA 90 bp | TTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATGGGCCCGCTCGGAGGCTGGCCTaGCCGCTCAACCAGTCACGC | + |
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Preference number: 4 (lower is better) Translates to: FIEQEGLMTCINSNRNGPARRLA*PLNQSR Trigger: GCGTGACTGGTTGAGCGGGCAGGCCAGCCTCCGAGC...GGGCCCATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000677638.1 ENST00000677955.1 |
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| CDS-3UTR GCA 90 bp | CCATCTTTACGTAGCCACCCATGCCCCATTCTTCACCCCAGCTGTTCTTCACCATTACGTAGCCACCCATaGCCCATTCTTCACCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: PSLRSHPCPILHPSCSSPLRSHP*PILHPS Trigger: GCTGGGGTGAAGAATGGGGCATGGGTGGCTACGTAA...TGGTGAAGAACAGCTGGGGTGAAGAATGGGGCATGGGTGGCTACGTAAAGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENST00000677523.1 ENST00000677955.1 ENST00000678259.1 ENST00000678367.1 ENST00000679025.1 ENST00000679028.1 |
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| CDS-3UTR CCA 90 bp | TTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATGGGCCCACCCGGCTCGGAGGCTaGCCTGCCCGCTCAACCAGT | + |
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Preference number: 4 (lower is better) Translates to: FIEQEGLMTCINSNRNGPTRLGG*PARSTS Trigger: ACTGGTTGAGCGGGCAGGCCAGCCTCCGAGCCGGGT...GGGCCCATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000677638.1 ENST00000677955.1 |
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| CDS-3UTR GCA 90 bp | TTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATGGGCCCTGCTGCGGTCGTAGCTaGGCAGGCGCACTCCACGGA | + |
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Preference number: 4 (lower is better) Translates to: FIEQEGLMTCINSNRNGPCCGRS*AGALHG Trigger: TCCGTGGAGTGCGCCTGCGCAGCTACGACCGCAGCA...GGGCCCATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000678367.1 |
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| CDS-3UTR GCA 90 bp | GCCTTCTTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATCCGGCGGCGCTTTCCTaGTGCGGTCGTAGCTGCGCA | + |
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Preference number: 4 (lower is better) Translates to: AFFIEQEGLMTCINSNRNPAALS*CGRSCA Trigger: TGCGCAGCTACGACCGCAGCAGGAAAGCGCCGCCGG...ATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAAGAAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000678367.1 |
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| CDS-3UTR GCA 90 bp | TTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATGGGCCCCGTTGCCAGGGCTGGTaGACACCTACTCGACCGCGT | + |
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Preference number: 4 (lower is better) Translates to: FIEQEGLMTCINSNRNGPRCQGW*TPTRPR Trigger: ACGCGGTCGAGTAGGTGTGCACCAGCCCTGGCAACG...GGGCCCATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000677638.1 ENST00000677955.1 |
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| CDS-3UTR GCA 90 bp | TTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATGGGCCCGGTAGACGCTCTCGTTaGCAGGGCTGGTGCACACCT | + |
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Preference number: 4 (lower is better) Translates to: FIEQEGLMTCINSNRNGPGRRSR*QGWCTP Trigger: AGGTGTGCACCAGCCCTGGCAACGAGAGCGTCTACC...GGGCCCATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000677638.1 ENST00000677955.1 |
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| CDS-3UTR CCA 90 bp | TTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATGGGCCCTCTCGTTGCCAGGGCTaGTGCACACCTACTCGACCG | + |
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Preference number: 4 (lower is better) Translates to: FIEQEGLMTCINSNRNGPSRCQG*CTPTRP Trigger: CGGTCGAGTAGGTGTGCACCAGCCCTGGCAACGAGA...GGGCCCATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000677638.1 ENST00000677955.1 |
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| CDS-3UTR TCA 90 bp | CCATCTTTACGTAGCCACCCATGCCCCATTCTTCACCCCAGCTGTTCTTCACCAAACAGGAAGGACTCATaGCCTGCATCAATAGCAACA | + |
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Preference number: 4 (lower is better) Translates to: PSLRSHPCPILHPSCSSPNRKDS*PASIAT Trigger: TGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTT...TGGTGAAGAACAGCTGGGGTGAAGAATGGGGCATGGGTGGCTACGTAAAGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000677523.1 ENST00000677955.1 ENST00000678259.1 ENST00000678367.1 ENST00000679025.1 ENST00000679028.1 |
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| CDS-3UTR CCA 90 bp | CCATCTTTACGTAGCCACCCATGCCCCATTCTTCACCCCAGCTGTTCTTCACCATTCCAAAAGCTGAGCTaGAATGATGACAAGGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: PSLRSHPCPILHPSCSSPFQKLS*NDDKEL Trigger: GAGCTCCTTGTCATCATTCCAGCTCAGCTTTTGGAA...TGGTGAAGAACAGCTGGGGTGAAGAATGGGGCATGGGTGGCTACGTAAAGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000679025.1 |
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| CDS-3UTR TCA 90 bp | GGGATTGTACTTACAGGATTCTTCCTCAGCATAGCTGGGACCACAGACGCACACAACAGGAAGGACTCATaGCCTGCATCAATAGCAACA | + |
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Preference number: 4 (lower is better) Translates to: GIVLTGFFLSIAGTTDAHNRKDS*PASIAT Trigger: TGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTT...GTGTGCGTCTGTGGTCCCAGCTATGCTGAGGAAGAATCCTGTAAGTACAATCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000679025.1 |
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| CDS-3UTR GCA 90 bp | GCCTTCTTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATGGTAGACGCTCTCGTTaGCAGGGCTGGTGCACACCT | + |
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Preference number: 4 (lower is better) Translates to: AFFIEQEGLMTCINSNRNGRRSR*QGWCTP Trigger: AGGTGTGCACCAGCCCTGGCAACGAGAGCGTCTACC...ATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAAGAAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677955.1 |
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| CDS-3UTR GCA 90 bp | CCATCTTTACGTAGCCACCCATGCCCCATTCTTCACCCCAGCTGTTCTTCACCAGATCCATGTCTTCACTaGTACAGTCTGGCTCAAAAT | + |
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Preference number: 4 (lower is better) Translates to: PSLRSHPCPILHPSCSSPDPCLH*YSLAQN Trigger: ATTTTGAGCCAGACTGTAGCAGTGAAGACATGGATC...TGGTGAAGAACAGCTGGGGTGAAGAATGGGGCATGGGTGGCTACGTAAAGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENST00000677523.1 ENST00000677955.1 ENST00000678259.1 ENST00000678367.1 ENST00000679025.1 ENST00000679028.1 |
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| CDS-3UTR GCA 90 bp | TTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATGGGCCCTTACGTAGCCACCCATaGCCCATTCTTCACCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: FIEQEGLMTCINSNRNGPLRSHP*PILHPS Trigger: GCTGGGGTGAAGAATGGGGCATGGGTGGCTACGTAA...GGGCCCATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000677523.1 ENST00000677638.1 ENST00000677955.1 ENST00000678259.1 ENST00000678367.1 ENST00000679025.1 ENST00000679028.1 |
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| CDS-3UTR CCA 90 bp | TTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATGGGCCCCTTCCTCAGCATAGCTaGGACCACAGACGCACACCA | + |
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Preference number: 4 (lower is better) Translates to: FIEQEGLMTCINSNRNGPLPQHS*DHRRTP Trigger: TGGTGTGCGTCTGTGGTCCCAGCTATGCTGAGGAAG...GGGCCCATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000679025.1 |
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| CDS-3UTR TCA 90 bp | CCATCTTTACGTAGCCACCCATGCCCCATTCTTCACCCCAGCTGTTCTTCACCATGTGCCTCTAAACTGTaGTCAAATGTTAGAGTAGCT | + |
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Preference number: 4 (lower is better) Translates to: PSLRSHPCPILHPSCSSPCASKL*SNVRVA Trigger: AGCTACTCTAACATTTGATCACAGTTTAGAGGCACA...TGGTGAAGAACAGCTGGGGTGAAGAATGGGGCATGGGTGGCTACGTAAAGATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000677523.1 ENST00000677955.1 ENST00000678259.1 ENST00000678367.1 ENST00000679025.1 ENST00000679028.1 |
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| CDS-3UTR GCA 90 bp | CCATCTTTACGTAGCCACCCATGCCCCATTCTTCACCCCAGCTGTTCTTCACCATCACCAAGTGAATCATaGCGTATAATCTGTTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: PSLRSHPCPILHPSCSSPSPSES*RIICCA Trigger: TGCACAACAGATTATACGGCATGATTCACTTGGTGA...TGGTGAAGAACAGCTGGGGTGAAGAATGGGGCATGGGTGGCTACGTAAAGATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000677955.1 ENST00000678367.1 ENST00000679028.1 |
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| CDS-3UTR GCA 90 bp | GCCTTCTTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATGCTCACAGCAACCTCTaGCTCCCGGGTTCAAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: AFFIEQEGLMTCINSNRNAHSNL*LPGSSH Trigger: ATGGCTTGAACCCGGGAGGCAGAGGTTGCTGTGAGC...ATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAAGAAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000679028.1 |
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| CDS-3UTR CCA 90 bp | GGGATTGTACTTACAGGATTCTTCCTCAGCATAGCTGGGACCACAGACGCACACTACTGTTGCCTCATATaGATAGGATTCCTCAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: GIVLTGFFLSIAGTTDAHYCCLI*IGFLRV Trigger: GACTCTGAGGAATCCTATCCATATGAGGCAACAGTA...GTGTGCGTCTGTGGTCCCAGCTATGCTGAGGAAGAATCCTGTAAGTACAATCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000679025.1 |
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| CDS-3UTR TCA 90 bp | CCATCTTTACGTAGCCACCCATGCCCCATTCTTCACCCCAGCTGTTCTTCACCAACAAACACCAAAAGCTaGGATAAGTTTTCCAATCTC | + |
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Preference number: 4 (lower is better) Translates to: PSLRSHPCPILHPSCSSPTNTKS*DKFSNL Trigger: GAGATTGGAAAACTTATCTCAGCTTTTGGTGTTTGT...TGGTGAAGAACAGCTGGGGTGAAGAATGGGGCATGGGTGGCTACGTAAAGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000679028.1 |
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| CDS-3UTR TCA 90 bp | TTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATGGGCCCCCACCTTCCAAAAGCTaGGCTGGAATGATGACAAGG | + |
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Preference number: 4 (lower is better) Translates to: FIEQEGLMTCINSNRNGPPPSKS*AGMMTR Trigger: CCTTGTCATCATTCCAGCTCAGCTTTTGGAAGGTGG...GGGCCCATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000679025.1 |
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| CDS-3UTR GCA 90 bp | GCCTTCTTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATTTACGTAGCCACCCATaGCCCATTCTTCACCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AFFIEQEGLMTCINSNRNLRSHP*PILHPS Trigger: GCTGGGGTGAAGAATGGGGCATGGGTGGCTACGTAA...ATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAAGAAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000677523.1 ENST00000677955.1 ENST00000678259.1 ENST00000678367.1 ENST00000679025.1 ENST00000679028.1 |
||
| CDS-3UTR CCA 90 bp | GCCTTCTTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATCTTAAGCCATCTGCCTaGCTCAGCCTCCTAAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: AFFIEQEGLMTCINSNRNLKPSA*LSLLKG Trigger: GCCCTTTAGGAGGCTGAGCCAGGCAGATGGCTTAAG...ATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAAGAAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000679025.1 |
||
| CDS-3UTR TCA 90 bp | TTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATGGGCCCAACAGGAAGGACTCATaGCCTGCATCAATAGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: FIEQEGLMTCINSNRNGPNRKDS*PASIAT Trigger: TGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTT...GGGCCCATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000677523.1 ENST00000677638.1 ENST00000677955.1 ENST00000678259.1 ENST00000678367.1 ENST00000679025.1 ENST00000679028.1 |
||
| CDS-3UTR TCA 90 bp | GCCTTCTTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATTCTTCCTCAGCCTCTTaGATAGCTGGAACTACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AFFIEQEGLMTCINSNRNSSSAS*IAGTTG Trigger: GCCTGTAGTTCCAGCTATTCAAGAGGCTGAGGAAGA...ATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAAGAAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000679028.1 |
||
| CDS-3UTR CCA 90 bp | TTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATGGGCCCATGCCTAAGGGCATGTaGAACTGTATCCAAACACTG | + |
|
Preference number: 4 (lower is better) Translates to: FIEQEGLMTCINSNRNGPMPKGM*NCIQTL Trigger: CAGTGTTTGGATACAGTTCCACATGCCCTTAGGCAT...GGGCCCATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677638.1 |
||
| CDS-3UTR TCA 90 bp | TTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATGGGCCCGTTATGAGAACGGTATaGAACTACCTTGTGTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: FIEQEGLMTCINSNRNGPVMRTV*NYLVCE Trigger: CTCACACACAAGGTAGTTTCATACCGTTCTCATAAC...GGGCCCATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000679028.1 |
||
| CDS-3UTR GCA 90 bp | TTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATGGGCCCGATCCATGTCTTCACTaGTACAGTCTGGCTCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: FIEQEGLMTCINSNRNGPDPCLH*YSLAQN Trigger: ATTTTGAGCCAGACTGTAGCAGTGAAGACATGGATC...GGGCCCATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000677523.1 ENST00000677638.1 ENST00000677955.1 ENST00000678259.1 ENST00000678367.1 ENST00000679025.1 ENST00000679028.1 |
||
| CDS-3UTR GCA 90 bp | TTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATGGGCCCACAATAGGATGTCTTTaGAGCCAGATATGCCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FIEQEGLMTCINSNRNGPTIGCL*SQICLR Trigger: TCTGAGGCATATCTGGCTGCAAAGACATCCTATTGT...GGGCCCATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677638.1 |
||
| CDS-3UTR TCA 90 bp | TTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATGGGCCCTGTGCCTCTAAACTGTaGTCAAATGTTAGAGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FIEQEGLMTCINSNRNGPCASKL*SNVRVA Trigger: AGCTACTCTAACATTTGATCACAGTTTAGAGGCACA...GGGCCCATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000677523.1 ENST00000677638.1 ENST00000677955.1 ENST00000678259.1 ENST00000678367.1 ENST00000679025.1 ENST00000679028.1 |
||
| CDS-3UTR TCA 90 bp | GCCTTCTTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATAACAGGAAGGACTCATaGCCTGCATCAATAGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: AFFIEQEGLMTCINSNRNNRKDS*PASIAT Trigger: TGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTT...ATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAAGAAGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000677523.1 ENST00000677955.1 ENST00000678259.1 ENST00000678367.1 ENST00000679025.1 ENST00000679028.1 |
||
| CDS-3UTR TCA 90 bp | TTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATGGGCCCCATGCTCGTATGTCATaGTACTCTTTTTCTGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: FIEQEGLMTCINSNRNGPHARMS*YSFSAS Trigger: TGATGCAGAAAAAGAGTATCATGACATACGAGCATG...GGGCCCATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000677638.1 |
||
| CDS-3UTR GCA 90 bp | TTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATGGGCCCGAAGGACTCATGACCTaGATCAATAGCAACAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: FIEQEGLMTCINSNRNGPEGLMT*INSNRN Trigger: ATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTC...GGGCCCATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000677523.1 ENST00000677638.1 ENST00000677955.1 ENST00000678259.1 ENST00000678367.1 ENST00000679025.1 ENST00000679028.1 |
||
| CDS-3UTR GCA 90 bp | TTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATGGGCCCAACCAGAGTCTATCATaGTCGTATGTCATGATACTC | + |
|
Preference number: 4 (lower is better) Translates to: FIEQEGLMTCINSNRNGPNQSLS*SYVMIL Trigger: GAGTATCATGACATACGAGCATGATAGACTCTGGTT...GGGCCCATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677638.1 |
||
| CDS-3UTR GCA 90 bp | TTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATGGGCCCTCACCAAGTGAATCATaGCGTATAATCTGTTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FIEQEGLMTCINSNRNGPSPSES*RIICCA Trigger: TGCACAACAGATTATACGGCATGATTCACTTGGTGA...GGGCCCATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000677638.1 ENST00000677955.1 ENST00000678367.1 ENST00000679028.1 |
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| CDS-3UTR GCA 90 bp | GCCTTCTTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATAAAATCCAGGTTTCGTaGCCAGGCAAAACCTCACTA | + |
|
Preference number: 4 (lower is better) Translates to: AFFIEQEGLMTCINSNRNKIQVS*PGKTSL Trigger: TAGTGAGGTTTTGCCTGGGCACGAAACCTGGATTTT...ATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAAGAAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000679028.1 |
||
| CDS-3UTR CCA 90 bp | TTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATGGGCCCATTTGTTGCCTCATATaGATAGGATTCCTCAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: FIEQEGLMTCINSNRNGPICCLI*IGFLRV Trigger: GACTCTGAGGAATCCTATCCATATGAGGCAACAAAT...GGGCCCATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677523.1 |
||
| CDS-3UTR TCA 90 bp | TTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATGGGCCCCCTAAATATCTACACTaGACTTTACTTGCAAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: FIEQEGLMTCINSNRNGPPKYLH*TLLANQ Trigger: CTGGTTTGCAAGTAAAGTTCAGTGTAGATATTTAGG...GGGCCCATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000677638.1 |
||
| CDS-3UTR TCA 90 bp | TTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATGGGCCCATTGCATGTACAGAATaGACAACTATGATGCTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FIEQEGLMTCINSNRNGPIACTE*TTMMLS Trigger: GCTTAGCATCATAGTTGTTCATTCTGTACATGCAAT...GGGCCCATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677638.1 |
||
| CDS-3UTR GCA 90 bp | GCCTTCTTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATGATCCATGTCTTCACTaGTACAGTCTGGCTCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: AFFIEQEGLMTCINSNRNDPCLH*YSLAQN Trigger: ATTTTGAGCCAGACTGTAGCAGTGAAGACATGGATC...ATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAAGAAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000677523.1 ENST00000677955.1 ENST00000678259.1 ENST00000678367.1 ENST00000679025.1 ENST00000679028.1 |
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| CDS-3UTR GCA 90 bp | TTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATGGGCCCTGTTATCTGATTCTGTaGTTTCAAATCCGTAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FIEQEGLMTCINSNRNGPCYLIL*FQIRSQ Trigger: TTGGCTACGGATTTGAAAGCACAGAATCAGATAACA...GGGCCCATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000677523.1 ENST00000677638.1 ENST00000677955.1 ENST00000678259.1 ENST00000678367.1 ENST00000679025.1 ENST00000679028.1 |
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| CDS-3UTR GCA 90 bp | TTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATGGGCCCACACTGAACTTTACTTaGAAACCAGAGTCTATCATG | + |
|
Preference number: 4 (lower is better) Translates to: FIEQEGLMTCINSNRNGPTLNFT*KPESIM Trigger: CATGATAGACTCTGGTTTGCAAGTAAAGTTCAGTGT...GGGCCCATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677638.1 |
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| CDS-3UTR CCA 90 bp | GCCTTCTTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATTCACTAATGATAAGGTaGGATTCCCAAGTAGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: AFFIEQEGLMTCINSNRNSLMIR*DSQVGT Trigger: TGTCCCTACTTGGGAATCCCACCTTATCATTAGTGA...ATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAAGAAGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000679028.1 |
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| CDS-3UTR TCA 90 bp | GCCTTCTTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATTGTGCCTCTAAACTGTaGTCAAATGTTAGAGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AFFIEQEGLMTCINSNRNCASKL*SNVRVA Trigger: AGCTACTCTAACATTTGATCACAGTTTAGAGGCACA...ATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAAGAAGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000677523.1 ENST00000677955.1 ENST00000678259.1 ENST00000678367.1 ENST00000679025.1 ENST00000679028.1 |
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| CDS-3UTR TCA 90 bp | GCCTTCTTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATCCCAGCCCTAATATATaGATTCCGAAAAAGGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: AFFIEQEGLMTCINSNRNPSPNI*IPKKVS Trigger: AGATACCTTTTTCGGAATTCATATATTAGGGCTGGG...ATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAAGAAGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000679025.1 |
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| CDS-3UTR GCA 90 bp | GCCTTCTTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATACAGGATTCTTCTGTTaGCTCATATGGATAGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: AFFIEQEGLMTCINSNRNTGFFC*LIWIGF Trigger: GAATCCTATCCATATGAGGCAACAGAAGAATCCTGT...ATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAAGAAGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000677955.1 ENST00000678259.1 ENST00000678367.1 ENST00000679028.1 |
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| CDS-3UTR GCA 90 bp | GCCTTCTTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATGAAGGACTCATGACCTaGATCAATAGCAACAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: AFFIEQEGLMTCINSNRNEGLMT*INSNRN Trigger: ATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTC...ATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAAGAAGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000677523.1 ENST00000677955.1 ENST00000678259.1 ENST00000678367.1 ENST00000679025.1 ENST00000679028.1 |
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| CDS-3UTR GCA 90 bp | GCCTTCTTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATTGTTATCTGATTCTGTaGTTTCAAATCCGTAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: AFFIEQEGLMTCINSNRNCYLIL*FQIRSQ Trigger: TTGGCTACGGATTTGAAAGCACAGAATCAGATAACA...ATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAAGAAGGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000677523.1 ENST00000677955.1 ENST00000678259.1 ENST00000678367.1 ENST00000679025.1 ENST00000679028.1 |
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| CDS-3UTR GCA 90 bp | GCCTTCTTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATACTTACAGGATTTGTTaGCTCATATGGATAGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: AFFIEQEGLMTCINSNRNTYRIC*LIWIGF Trigger: GAATCCTATCCATATGAGGCAACAAATCCTGTAAGT...ATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAAGAAGGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677523.1 |
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| CDS GCA 90 bp | CACAGCTGGGCCTGGCCGGCGGCGCTTTCCTGCTGCGGTCGTAGCTaGGCAGGCGCACTCCACGGATGCCGCTCAAGGTTGCGGAGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: HSWAWPAALSCCGRS*AGALHGCRSRLRRS Trigger: CGACCTCCGCAACCTTGAGCGGCATCCGTGGAGTGCGCCTGCGCAGCTACGACCGCAGCAGGAAAGCGCCGCCGGCCAGGCCCAGCTGTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000340342.11 ENST00000342020.6 ENST00000343150.10 ENST00000482054.2 ENST00000676531.1 ENST00000676881.1 ENST00000677019.1 ENST00000677262.1 ENST00000677345.1 ENST00000677821.1 ENST00000677864.1 ENST00000677935.1 ENST00000678367.1 ENST00000678649.1 ENST00000678752.1 ENST00000679141.1 ENST00000679149.1 ENST00000679157.1 |
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| CDS GCA 90 bp | GTCCAGAGCTGTAGGAGCTGTGTCCACCCGGCTCGGAGGCTGGCCTaGCCGCTCAACCAGTCACGCGCCTCCGCGGGGTCCTCAACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VQSCRSCVHPARRLA*PLNQSRASAGSSTA Trigger: GGCAGTTGAGGACCCCGCGGAGGCGCGTGACTGGTTGAGCGGGCAGGCCAGCCTCCGAGCCGGGTGGACACAGCTCCTACAGCTCTGGAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000677262.1 ENST00000677821.1 |
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| CDS GCA 90 bp | GCGCTTTCCTGCTGCGGTCGTAGCTGCGCAGGCGCACTCCACGGATaGCGCTCAAGGTTGCGGAGGTCGCGGTTCTGGCCCAGCTTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: ALSCCGRSCAGALHG*RSRLRRSRFWPSFA Trigger: GGCGAAGCTGGGCCAGAACCGCGACCTCCGCAACCTTGAGCGGCATCCGTGGAGTGCGCCTGCGCAGCTACGACCGCAGCAGGAAAGCGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000676531.1 ENST00000677019.1 ENST00000677345.1 ENST00000677821.1 ENST00000677935.1 ENST00000678752.1 ENST00000679149.1 ENST00000679157.1 |
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| CDS CCA 90 bp | CGGTCAGAGGATGTTTGCGGTGACGCCAGCAGGAGTACCGCTGTCTaGCGTGCGGGGACTGAGCTTCCCTGTCTGGCCGGGCCAGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: RSEDVCGDASRSTAV*RAGTELPCLAGPGP Trigger: AGGGCCTGGCCCGGCCAGACAGGGAAGCTCAGTCCCCGCACGCCAGACAGCGGTACTCCTGCTGGCGTCACCGCAAACATCCTCTGACCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000676576.1 ENST00000676961.1 ENST00000677345.1 ENST00000677761.1 ENST00000679252.1 |
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| CDS CCA 90 bp | GTTCTGGCCCAGCTTCGCCTGACTCTGCTTCTAAAACCTCGGGTCTaGGTTCGGCCGGCACCGCCCCGCCGCCTGGCTGCGCTGCGATTG | + |
|
Preference number: 5 (lower is better) Translates to: VLAQLRLTLLLKPRV*VRPAPPRRLAALRL Trigger: CAATCGCAGCGCAGCCAGGCGGCGGGGCGGTGCCGGCCGAACCCAGACCCGAGGTTTTAGAAGCAGAGTCAGGCGAAGCTGGGCCAGAAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000676531.1 ENST00000679149.1 ENST00000679157.1 |
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| CDS GCA 90 bp | GCGGTCGTAGCTGCGCAGGCGCACTCCACGGATGCCGCTCAAGGTTaGGGAGGTCGCGGTTCTGGCCCAGCTTCGCCTGACTCTGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: AVVAAQAHSTDAAQG*GGRGSGPASPDSAS Trigger: AGAAGCAGAGTCAGGCGAAGCTGGGCCAGAACCGCGACCTCCGCAACCTTGAGCGGCATCCGTGGAGTGCGCCTGCGCAGCTACGACCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000676531.1 ENST00000677345.1 ENST00000677821.1 ENST00000677935.1 ENST00000678752.1 ENST00000679149.1 ENST00000679157.1 |
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| CDS GCA 90 bp | AAGGCCAGCAGAGTTCGGGGTAGACGCTCTCGTTGCCAGGGCTGGTaGACACCTACTCGACCGCGTCCTCTCTTCCAGTCCCTGTCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: KASRVRGRRSRCQGW*TPTRPRPLFQSLSG Trigger: GCCGGACAGGGACTGGAAGAGAGGACGCGGTCGAGTAGGTGTGCACCAGCCCTGGCAACGAGAGCGTCTACCCCGAACTCTGCTGGCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000343150.10 ENST00000482054.2 ENST00000676576.1 ENST00000676769.1 ENST00000676881.1 ENST00000676961.1 ENST00000677262.1 ENST00000677345.1 ENST00000677615.1 ENST00000677638.1 ENST00000677821.1 ENST00000677955.1 ENST00000678596.1 ENST00000678599.1 ENST00000679149.1 ENST00000679252.1 |
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| CDS TCA 90 bp | GACTCTGGGTGCTCTGATCCCTGGCGCGGTTCGTGGCTTGTTTACTaGCTGTCCCAGAGCTGGGCGTGCCTGCCTCAGTGGACCTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: DSGCSDPWRGSWLVY*LSQSWACLPQWTWR Trigger: CCTCCAGGTCCACTGAGGCAGGCACGCCCAGCTCTGGGACAGTCAGTAAACAAGCCACGAACCGCGCCAGGGATCAGAGCACCCAGAGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000676531.1 ENST00000679149.1 ENST00000679157.1 |
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| CDS CCA 90 bp | GTGAGGGCCTTCTTGCTTGTGGGGATTCTTTGCAGAGGCCCAAGGTaGTGTAGGGCATCACAGGGCGAGAGGGCTGAGTGTCCTAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: VRAFLLVGILCRGPR*CRASQGERAECPSS Trigger: TGAGCTAGGACACTCAGCCCTCTCGCCCTGTGATGCCCTACACCACCTTGGGCCTCTGCAAAGAATCCCCACAAGCAAGAAGGCCCTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000678442.1 |
||
| CDS TCA 90 bp | AGCAACCTCTGCCTCCCGGGTTCAAGCCATTCTTCCTCAGCCTCTTaGATAGCTGGAACTACAGGCGTGCGCCGCCTCGCCCGTCTAATT | + |
|
Preference number: 5 (lower is better) Translates to: SNLCLPGSSHSSSAS*IAGTTGVRRLARLI Trigger: AATTAGACGGGCGAGGCGGCGCACGCCTGTAGTTCCAGCTATTCAAGAGGCTGAGGAAGAATGGCTTGAACCCGGGAGGCAGAGGTTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000676480.1 ENST00000676576.1 ENST00000676909.1 ENST00000676961.1 ENST00000677345.1 ENST00000677761.1 ENST00000678965.1 ENST00000679028.1 ENST00000679252.1 |
||
| CDS GCA 90 bp | CAGGAAGTGTATCTTGTGAGGGCCTTCTTGCTTGTGGGGATTCTTTaGAGAGGCCCAAGGTGGTGTAGGGCATCACAGGGCGAGAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: QEVYLVRAFLLVGIL*RGPRWCRASQGERA Trigger: AGCCCTCTCGCCCTGTGATGCCCTACACCACCTTGGGCCTCTGCAAAGAATCCCCACAAGCAAGAAGGCCCTCACAAGATACACTTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000678442.1 |
||
| CDS CCA 90 bp | ACAACCACCTCCCACACTCAAGCAATCGCCCTACCTCAGCATAGCTaGGACCACAGACGCACACCACCACAGCCGGCTAATTTTCGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: TTTSHTQAIALPQHS*DHRRTPPQPANFRC Trigger: ACAACGAAAATTAGCCGGCTGTGGTGGTGTGCGTCTGTGGTCCCAGCTATGCTGAGGTAGGGCGATTGCTTGAGTGTGGGAGGTGGTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000676909.1 ENST00000676961.1 ENST00000677349.1 ENST00000677935.1 ENST00000678654.1 |
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| CDS-3UTR CAA 90 bp | CCATCTTTACGTAGCCACCCATGCCCCATTCTTCACCCCAGCTGTTCTTCACCATGCATCGCCTTCCACTaGGTCCACTGTGCCTCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: PSLRSHPCPILHPSCSSPCIAFH*VHCASK Trigger: TTTAGAGGCACAGTGGACCAAGTGGAAGGCGATGCA...TGGTGAAGAACAGCTGGGGTGAAGAATGGGGCATGGGTGGCTACGTAAAGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000677523.1 ENST00000677955.1 ENST00000678259.1 ENST00000678367.1 ENST00000679025.1 ENST00000679028.1 |
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| CDS-3UTR CAA 90 bp | CCATCTTTACGTAGCCACCCATGCCCCATTCTTCACCCCAGCTGTTCTTCACCATTCTTCCTCAGCCTCTaGAATAGCTGGAACTACAGG | + |
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Preference number: 5 (lower is better) Translates to: PSLRSHPCPILHPSCSSPFFLSL*NSWNYR Trigger: CCTGTAGTTCCAGCTATTCAAGAGGCTGAGGAAGAA...TGGTGAAGAACAGCTGGGGTGAAGAATGGGGCATGGGTGGCTACGTAAAGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000679028.1 |
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| CDS-3UTR CAA 90 bp | TTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATGGGCCCTGCATCGCCTTCCACTaGGTCCACTGTGCCTCTAAA | + |
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Preference number: 5 (lower is better) Translates to: FIEQEGLMTCINSNRNGPCIAFH*VHCASK Trigger: TTTAGAGGCACAGTGGACCAAGTGGAAGGCGATGCA...GGGCCCATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000677523.1 ENST00000677638.1 ENST00000677955.1 ENST00000678259.1 ENST00000678367.1 ENST00000679025.1 ENST00000679028.1 |
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| CDS-3UTR CAA 90 bp | CCATCTTTACGTAGCCACCCATGCCCCATTCTTCACCCCAGCTGTTCTTCACCATACAGGATTCTTCTGTaGCCTCATATGGATAGGATT | + |
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Preference number: 5 (lower is better) Translates to: PSLRSHPCPILHPSCSSPYRILL*PHMDRI Trigger: AATCCTATCCATATGAGGCAACAGAAGAATCCTGTA...TGGTGAAGAACAGCTGGGGTGAAGAATGGGGCATGGGTGGCTACGTAAAGATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000677955.1 ENST00000678259.1 ENST00000678367.1 ENST00000679028.1 |
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| CDS-3UTR CAA 90 bp | CCATCTTTACGTAGCCACCCATGCCCCATTCTTCACCCCAGCTGTTCTTCACCATTGTACTTACAGGATTaGTTGCCTCATATGGATAGG | + |
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Preference number: 5 (lower is better) Translates to: PSLRSHPCPILHPSCSSPLYLQD*LPHMDR Trigger: CCTATCCATATGAGGCAACAAATCCTGTAAGTACAA...TGGTGAAGAACAGCTGGGGTGAAGAATGGGGCATGGGTGGCTACGTAAAGATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000677523.1 |
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| CDS-3UTR CAA 90 bp | CCATCTTTACGTAGCCACCCATGCCCCATTCTTCACCCCAGCTGTTCTTCACCATACTTACAGGATTTGTaGCCTCATATGGATAGGATT | + |
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Preference number: 5 (lower is better) Translates to: PSLRSHPCPILHPSCSSPYLQDL*PHMDRI Trigger: AATCCTATCCATATGAGGCAACAAATCCTGTAAGTA...TGGTGAAGAACAGCTGGGGTGAAGAATGGGGCATGGGTGGCTACGTAAAGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000677523.1 |
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| CDS-3UTR CAA 90 bp | GCCTTCTTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATTGCATCGCCTTCCACTaGGTCCACTGTGCCTCTAAA | + |
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Preference number: 5 (lower is better) Translates to: AFFIEQEGLMTCINSNRNCIAFH*VHCASK Trigger: TTTAGAGGCACAGTGGACCAAGTGGAAGGCGATGCA...ATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAAGAAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000677523.1 ENST00000677955.1 ENST00000678259.1 ENST00000678367.1 ENST00000679025.1 ENST00000679028.1 |
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| CDS-3UTR CAA 90 bp | TTTATAGAACAGGAAGGACTCATGACCTGCATCAATAGCAACAGAAATGGGCCCTACACTGAACTTTACTaGCAAACCAGAGTCTATCAT | + |
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Preference number: 5 (lower is better) Translates to: FIEQEGLMTCINSNRNGPYTELY*QTRVYH Trigger: ATGATAGACTCTGGTTTGCAAGTAAAGTTCAGTGTA...GGGCCCATTTCTGTTGCTATTGATGCAGGTCATGAGTCCTTCCTGTTCTATAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677638.1 |
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| CDS GCA 72 bp | GCCTGGCCGGCGGCGCTTTCCTGCTGCGGTCGTAGCTaGGCAGGCGCACTCCACGGATGCCGCTCAAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: AWPAALSCCGRS*AGALHGCRSRL Trigger: CAACCTTGAGCGGCATCCGTGGAGTGCGCCTGCGCAGCTACGACCGCAGCAGGAAAGCGCCGCCGGCCAGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000340342.11 ENST00000342020.6 ENST00000343150.10 ENST00000482054.2 ENST00000676531.1 ENST00000676881.1 ENST00000677019.1 ENST00000677262.1 ENST00000677345.1 ENST00000677821.1 ENST00000677864.1 ENST00000677935.1 ENST00000678367.1 ENST00000678649.1 ENST00000678752.1 ENST00000679141.1 ENST00000679149.1 ENST00000679157.1 |
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| CDS CCA 72 bp | CCTCTCTTCCAGTCCCTGTCCGGCCACAGCTGGGCCTaGCCGGCGGCGCTTTCCTGCTGCGGTCGTAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: PLFQSLSGHSWA*PAALSCCGRSC Trigger: GCAGCTACGACCGCAGCAGGAAAGCGCCGCCGGCCAGGCCCAGCTGTGGCCGGACAGGGACTGGAAGAGAGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 21 transcripts: ENST00000340342.11 ENST00000342020.6 ENST00000343150.10 ENST00000482054.2 ENST00000495822.2 ENST00000676531.1 ENST00000676769.1 ENST00000676881.1 ENST00000677019.1 ENST00000677262.1 ENST00000677345.1 ENST00000677821.1 ENST00000677864.1 ENST00000677935.1 ENST00000677955.1 ENST00000678367.1 ENST00000678649.1 ENST00000678752.1 ENST00000679141.1 ENST00000679149.1 ENST00000679157.1 |
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| CDS TCA 72 bp | GCTTCCAGGGCTCCAGGCGTGGCAGGGCCGGGGACATaGCGCCTGCGCCACACACTGGCTGTAGCGGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: ASRAPGVAGPGT*RLRHTLAVAVR Trigger: TCTGACCGCTACAGCCAGTGTGTGGCGCAGGCGTCATGTCCCCGGCCCTGCCACGCCTGGAGCCCTGGAAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000676480.1 ENST00000676576.1 ENST00000676961.1 ENST00000677345.1 ENST00000677761.1 ENST00000679252.1 |
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| CDS GCA 72 bp | GCTGCGCAGGCGCACTCCACGGATGCCGCTCAAGGTTaGGGAGGTCGCGGTTCTGGCCCAGCTTCGCCTGAC | + |
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Preference number: 6 (lower is better) Translates to: AAQAHSTDAAQG*GGRGSGPASPD Trigger: GTCAGGCGAAGCTGGGCCAGAACCGCGACCTCCGCAACCTTGAGCGGCATCCGTGGAGTGCGCCTGCGCAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000676531.1 ENST00000677345.1 ENST00000677821.1 ENST00000677935.1 ENST00000678752.1 ENST00000679149.1 ENST00000679157.1 |
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| CDS CCA 72 bp | CAGCTTCGCCTGACTCTGCTTCTAAAACCTCGGGTCTaGGTTCGGCCGGCACCGCCCCGCCGCCTGGCTGCG | + |
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Preference number: 6 (lower is better) Translates to: QLRLTLLLKPRV*VRPAPPRRLAA Trigger: CGCAGCCAGGCGGCGGGGCGGTGCCGGCCGAACCCAGACCCGAGGTTTTAGAAGCAGAGTCAGGCGAAGCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000676531.1 ENST00000679149.1 ENST00000679157.1 |
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| CDS CCA 72 bp | GATGTTTGCGGTGACGCCAGCAGGAGTACCGCTGTCTaGCGTGCGGGGACTGAGCTTCCCTGTCTGGCCGGG | + |
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Preference number: 6 (lower is better) Translates to: DVCGDASRSTAV*RAGTELPCLAG Trigger: CCCGGCCAGACAGGGAAGCTCAGTCCCCGCACGCCAGACAGCGGTACTCCTGCTGGCGTCACCGCAAACATC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000676576.1 ENST00000676961.1 ENST00000677345.1 ENST00000677761.1 ENST00000679252.1 |
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| CDS CAA 90 bp | TGGGCGGGGACTCTGGGTGCTCTGATCCCTGGCGCGGTTCGTGGCTaGTTTACTGACTGTCCCAGAGCTGGGCGTGCCTGCCTCAGTGGA | + |
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Preference number: 6 (lower is better) Translates to: WAGTLGALIPGAVRG*FTDCPRAGRACLSG Trigger: TCCACTGAGGCAGGCACGCCCAGCTCTGGGACAGTCAGTAAACAAGCCACGAACCGCGCCAGGGATCAGAGCACCCAGAGTCCCCGCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000676531.1 ENST00000679149.1 ENST00000679157.1 |
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| CDS TCA 72 bp | CACACACTGGCTGTAGCGGTCAGAGGATGTTTGCGGTaGCGCCAGCAGGAGTACCGCTGTCTGGCGTGCGGG | + |
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Preference number: 6 (lower is better) Translates to: HTLAVAVRGCLR*RQQEYRCLACG Trigger: CCCGCACGCCAGACAGCGGTACTCCTGCTGGCGTCACCGCAAACATCCTCTGACCGCTACAGCCAGTGTGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000676480.1 ENST00000676576.1 ENST00000676961.1 ENST00000677345.1 ENST00000677761.1 ENST00000679252.1 |
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| CDS GCA 72 bp | CTCAAGGCCAGCAGAGTTCGGGGTAGACGCTCTCGTTaGCAGGGCTGGTGCACACCTACTCGACCGCGTCCT | + |
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Preference number: 6 (lower is better) Translates to: LKASRVRGRRSR*QGWCTPTRPRP Trigger: AGGACGCGGTCGAGTAGGTGTGCACCAGCCCTGGCAACGAGAGCGTCTACCCCGAACTCTGCTGGCCTTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 18 transcripts: ENST00000343150.10 ENST00000482054.2 ENST00000676466.1 ENST00000676576.1 ENST00000676769.1 ENST00000676881.1 ENST00000676961.1 ENST00000677262.1 ENST00000677345.1 ENST00000677349.1 ENST00000677615.1 ENST00000677638.1 ENST00000677821.1 ENST00000677955.1 ENST00000678596.1 ENST00000678599.1 ENST00000679149.1 ENST00000679252.1 |
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| CDS TCA 72 bp | TGCTCTGATCCCTGGCGCGGTTCGTGGCTTGTTTACTaGCTGTCCCAGAGCTGGGCGTGCCTGCCTCAGTGG | + |
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Preference number: 6 (lower is better) Translates to: CSDPWRGSWLVY*LSQSWACLPQW Trigger: CCACTGAGGCAGGCACGCCCAGCTCTGGGACAGTCAGTAAACAAGCCACGAACCGCGCCAGGGATCAGAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000676531.1 ENST00000679149.1 ENST00000679157.1 |
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| CDS CAA 72 bp | ACTCTGGGTGCTCTGATCCCTGGCGCGGTTCGTGGCTaGTTTACTGACTGTCCCAGAGCTGGGCGTGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: TLGALIPGAVRG*FTDCPRAGRAC Trigger: GCAGGCACGCCCAGCTCTGGGACAGTCAGTAAACAAGCCACGAACCGCGCCAGGGATCAGAGCACCCAGAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000676531.1 ENST00000679149.1 ENST00000679157.1 |
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| CDS TCA 72 bp | TGCCTCCCGGGTTCAAGCCATTCTTCCTCAGCCTCTTaGATAGCTGGAACTACAGGCGTGCGCCGCCTCGCC | + |
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Preference number: 6 (lower is better) Translates to: CLPGSSHSSSAS*IAGTTGVRRLA Trigger: GGCGAGGCGGCGCACGCCTGTAGTTCCAGCTATTCAAGAGGCTGAGGAAGAATGGCTTGAACCCGGGAGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000676480.1 ENST00000676576.1 ENST00000676909.1 ENST00000676961.1 ENST00000677345.1 ENST00000677761.1 ENST00000678965.1 ENST00000679028.1 ENST00000679252.1 |
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| CDS CAA 72 bp | CTGCCTCCCGGGTTCAAGCCATTCTTCCTCAGCCTCTaGAATAGCTGGAACTACAGGCGTGCGCCGCCTCGC | + |
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Preference number: 6 (lower is better) Translates to: LPPGFKPFFLSL*NSWNYRRAPPR Trigger: GCGAGGCGGCGCACGCCTGTAGTTCCAGCTATTCAAGAGGCTGAGGAAGAATGGCTTGAACCCGGGAGGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000676480.1 ENST00000676576.1 ENST00000676909.1 ENST00000676961.1 ENST00000677345.1 ENST00000677761.1 ENST00000678965.1 ENST00000679028.1 ENST00000679252.1 |
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| CDS CAA 90 bp | CAGCAACCTCTGCCTCCCGGGTTCAAGCCATTCTTCCTCAGCCTCTaGAATAGCTGGAACTACAGGCGTGCGCCGCCTCGCCCGTCTAAT | + |
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Preference number: 6 (lower is better) Translates to: QQPLPPGFKPFFLSL*NSWNYRRAPPRPSN Trigger: ATTAGACGGGCGAGGCGGCGCACGCCTGTAGTTCCAGCTATTCAAGAGGCTGAGGAAGAATGGCTTGAACCCGGGAGGCAGAGGTTGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000676480.1 ENST00000676576.1 ENST00000676909.1 ENST00000676961.1 ENST00000677345.1 ENST00000677761.1 ENST00000678965.1 ENST00000679028.1 ENST00000679252.1 |
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| CDS GCA 72 bp | GAGTTCAACGGCGCGATATCGGCTCACAGCAACCTCTaGCTCCCGGGTTCAAGCCATTCTTCCTCAGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: EFNGAISAHSNL*LPGSSHSSSAS Trigger: AGAGGCTGAGGAAGAATGGCTTGAACCCGGGAGGCAGAGGTTGCTGTGAGCCGATATCGCGCCGTTGAACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000676480.1 ENST00000676576.1 ENST00000676909.1 ENST00000676961.1 ENST00000677345.1 ENST00000677761.1 ENST00000678965.1 ENST00000679028.1 ENST00000679252.1 |
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| CDS CCA 72 bp | TCCCACACTCAAGCAATCGCCCTACCTCAGCATAGCTaGGACCACAGACGCACACCACCACAGCCGGCTAAT | + |
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Preference number: 6 (lower is better) Translates to: SHTQAIALPQHS*DHRRTPPQPAN Trigger: ATTAGCCGGCTGTGGTGGTGTGCGTCTGTGGTCCCAGCTATGCTGAGGTAGGGCGATTGCTTGAGTGTGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000676909.1 ENST00000676961.1 ENST00000677349.1 ENST00000677935.1 ENST00000678654.1 |
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| CDS CCA 72 bp | TTCTTGCTTGTGGGGATTCTTTGCAGAGGCCCAAGGTaGTGTAGGGCATCACAGGGCGAGAGGGCTGAGTGT | + |
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Preference number: 6 (lower is better) Translates to: FLLVGILCRGPR*CRASQGERAEC Trigger: ACACTCAGCCCTCTCGCCCTGTGATGCCCTACACCACCTTGGGCCTCTGCAAAGAATCCCCACAAGCAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000678442.1 |
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| CDS GCA 72 bp | TATCTTGTGAGGGCCTTCTTGCTTGTGGGGATTCTTTaGAGAGGCCCAAGGTGGTGTAGGGCATCACAGGGC | + |
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Preference number: 6 (lower is better) Translates to: YLVRAFLLVGIL*RGPRWCRASQG Trigger: GCCCTGTGATGCCCTACACCACCTTGGGCCTCTGCAAAGAATCCCCACAAGCAAGAAGGCCCTCACAAGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000678442.1 |
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| CDS CAA 72 bp | AGGGTCTCATTCTGTCACTCAGACTGGAGAGTGCATTaGCACAACCACCTCCCACACTCAAGCAATCGCCCT | + |
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Preference number: 6 (lower is better) Translates to: RVSFCHSDWRVH*HNHLPHSSNRP Trigger: AGGGCGATTGCTTGAGTGTGGGAGGTGGTTGTGCAAATGCACTCTCCAGTCTGAGTGACAGAATGAGACCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000676909.1 ENST00000676961.1 ENST00000677349.1 ENST00000677935.1 ENST00000678654.1 |
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