Pregenerated sensors for CTRL (Homo sapiens)
Ensembl gene IDs: ENSG00000141086Ensembl transcript IDs: ENST00000571044.5, ENST00000571605.1, ENST00000572144.5, ENST00000573845.1, ENST00000574481.6, ENST00000575302.1, ENST00000576408.1, ENST00000576915.1
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACAGGCTGCCTCTCCAGGGAGGGCTGCCATTCATTCCAACAGTTCTaGCTTCTTGCTGTAGGACCAAGGGGTTGCCCTGGAGGAGGGGTG | + |
|
Preference number: 1 (lower is better) Translates to: TGCLSREGCHSFQQF*LLAVGPRGCPGGGV Trigger: CACCCCTCCTCCAGGGCAACCCCTTGGTCCTACAGCAAGAAGCCAGAACTGTTGGAATGAATGGCAGCCCTCCCTGGAGAGGCAGCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| 3UTR-3UTR CCA 90 bp | GCCCCTTCTGTGCCAGAAGTCCAAGTAGGGAGTCGGACCCTCAACAGCCTCTTCTTTAATGGGTTGAGCTaGGGAGGGCCTGTGGTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: APSVPEVQVGSRTLNSLFFNGLS*GGPVVS Trigger: GCTCACCACAGGCCCTCCCCAGCTCAACCCATTAAA...GAAGAGGCTGTTGAGGGTCCGACTCCCTACTTGGACTTCTGGCACAGAAGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| 3UTR-3UTR TCA 90 bp | ATGGCTACTCTAGGAAGAGCCACTGCTACTCAAGGAGTCACTCAGCCCCTTCTGGGGTCTTTAATGGGTTaGGCTGGGGAGGGCCTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: MATLGRATATQGVTQPLLGSLMG*AGEGLW Trigger: CCACAGGCCCTCCCCAGCTCAACCCATTAAAGACCC...CAGAAGGGGCTGAGTGACTCCTTGAGTAGCAGTGGCTCTTCCTAGAGTAGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| 3UTR-3UTR TCA 90 bp | TCATTCCAACAGTTCTGGCTTCTTGCTGTAGGACCAAGGGGTTGCCCTGGAGGAACAGACATGAATGCATaGTGGGACAGGGCCTGGGTC | + |
|
Preference number: 2 (lower is better) Translates to: SFQQFWLLAVGPRGCPGGTDMNA*WDRAWV Trigger: GACCCAGGCCCTGTCCCATCATGCATTCATGTCTGT...TCCTCCAGGGCAACCCCTTGGTCCTACAGCAAGAAGCCAGAACTGTTGGAATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| 3UTR-3UTR TCA 90 bp | CCTTCTGTGCCAGAAGTCCAAGTAGGGAGTCGGACCCTCAACAGCCTCTTCTTTCCAGGAAGACAGACATaGATGCATGATGGGACAGGG | + |
|
Preference number: 2 (lower is better) Translates to: PSVPEVQVGSRTLNSLFFPGRQT*MHDGTG Trigger: CCCTGTCCCATCATGCATTCATGTCTGTCTTCCTGG...AAAGAAGAGGCTGTTGAGGGTCCGACTCCCTACTTGGACTTCTGGCACAGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| 3UTR-3UTR TCA 90 bp | TCCTCTGTATTCAGTAAACAGGCTGCCTCTCCAGGGAGGGCTGCCATTCATTCCGCCTCTTCTTTCTCCTaGGCCAGGAAGACAGACATG | + |
|
Preference number: 2 (lower is better) Translates to: SSVFSKQAASPGRAAIHSASSFS*ARKTDM Trigger: CATGTCTGTCTTCCTGGCTCAGGAGAAAGAAGAGGC...GGAATGAATGGCAGCCCTCCCTGGAGAGGCAGCCTGTTTACTGAATACAGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| 3UTR GCA 72 bp | CCCCGGCCTCGGCATGGCTACTCTAGGAAGAGCCACTaGTACTCAAGGAGTCACTCAGCCCCTTCTGTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: PRPRHGYSRKSH*YSRSHSAPSVP Trigger: TGGCACAGAAGGGGCTGAGTGACTCCTTGAGTAGCAGTGGCTCTTCCTAGAGTAGCCATGCCGAGGCCGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| 3UTR CCA 72 bp | CTCTCCAGGGAGGGCTGCCATTCATTCCAACAGTTCTaGCTTCTTGCTGTAGGACCAAGGGGTTGCCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LSREGCHSFQQF*LLAVGPRGCPG Trigger: TCCAGGGCAACCCCTTGGTCCTACAGCAAGAAGCCAGAACTGTTGGAATGAATGGCAGCCCTCCCTGGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| 3UTR TCA 72 bp | CAGCCTCTTCTTTCTCCTGAGCCAGGAAGACAGACATaGATGCATGATGGGACAGGGCCTGGGTCTTTAATG | + |
|
Preference number: 3 (lower is better) Translates to: QPLLSPEPGRQT*MHDGTGPGSLM Trigger: CATTAAAGACCCAGGCCCTGTCCCATCATGCATTCATGTCTGTCTTCCTGGCTCAGGAGAAAGAAGAGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS-3UTR TCA 90 bp | GGGCCCCGGCCTCGGCATGGCTACTCTAGGAAGAGCCACTGCTACTCAAGGAGTGGAGTCAGTGATACTTaGGCCCCAGTACTGCCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GPRPRHGYSRKSHCYSRSGVSDT*APVLPA Trigger: TGCCGGCAGTACTGGGGCTCAAGTATCACTGACTCC...ACTCCTTGAGTAGCAGTGGCTCTTCCTAGAGTAGCCATGCCGAGGCCGGGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS-3UTR TCA 90 bp | TCAAGGAGTCACTCAGCCCCTTCTGTGCCAGAAGTCCAAGTAGGGAGTCGGACCAATGGCGGCCAGGGCTaGCATTGCAGTGGGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRSHSAPSVPEVQVGSRTNGGQG*HCSGQQ Trigger: CTGCTGCCCACTGCAATGTCAGCCCTGGCCGCCATT...GGTCCGACTCCCTACTTGGACTTCTGGCACAGAAGGGGCTGAGTGACTCCTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS-3UTR GCA 90 bp | GGTGGGGGCCCCGGCCTCGGCATGGCTACTCTAGGAAGAGCCACTGCTACTCAACTCTCCAGGGAGGGCTaGCATTCATTCCAACAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GGGPGLGMATLGRATATQLSREG*HSFQQF Trigger: GAACTGTTGGAATGAATGGCAGCCCTCCCTGGAGAG...TTGAGTAGCAGTGGCTCTTCCTAGAGTAGCCATGCCGAGGCCGGGGCCCCCACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS-3UTR CCA 90 bp | ACGTATCCTCTGTATTCAGTAAACAGGCTGCCTCTCCAGGGAGGGCTGCCATTCCCTCCGGAGTCACCCTaGCACGAGGAGGCACCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: TYPLYSVNRLPLQGGLPFPPESP*HEEAPA Trigger: CGCAGGTGCCTCCTCGTGCCAGGGTGACTCCGGAGG...GAATGGCAGCCCTCCCTGGAGAGGCAGCCTGTTTACTGAATACAGAGGATACGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS-3UTR TCA 90 bp | CTCAACAGCCTCTTCTTTCTCCTGAGCCAGGAAGACAGACATGAATGCATGATGCATTGCCCACGCCACTaGGGCGACCCCAGCCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LNSLFFLLSQEDRHECMMHCPRH*GDPSRW Trigger: CCACCGGCTGGGGTCGCCTCAGTGGCGTGGGCAATG...CATCATGCATTCATGTCTGTCTTCCTGGCTCAGGAGAAAGAAGAGGCTGTTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS-3UTR TCA 90 bp | CTCCTGAGCCAGGAAGACAGACATGAATGCATGATGGGACAGGGCCTGGGTCTTCAGTACTGCCGGCACTaGTTCACAGTGACCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLSQEDRHECMMGQGLGLQYCRH*FTVTRG Trigger: GCCCCTGGTCACTGTGAATCAGTGCCGGCAGTACTG...AAGACCCAGGCCCTGTCCCATCATGCATTCATGTCTGTCTTCCTGGCTCAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS-3UTR TCA 90 bp | AAGAGCCACTGCTACTCAAGGAGTCACTCAGCCCCTTCTGTGCCAGAAGTCCAAGGCTTAGGGTCAGGCTaGGCAGCAACATCGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KSHCYSRSHSAPSVPEVQGLGSG*AATSWQ Trigger: CTGCCACGATGTTGCTGCTCAGCCTGACCCTAAGCC...TTGGACTTCTGGCACAGAAGGGGCTGAGTGACTCCTTGAGTAGCAGTGGCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS-3UTR TCA 90 bp | TCAAGGAGTCACTCAGCCCCTTCTGTGCCAGAAGTCCAAGTAGGGAGTCGGACCAGTCAGAGCCTCGTTTaGGGATGCCAGGCAAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRSHSAPSVPEVQVGSRTSQSLV*GCQANW Trigger: CCAGTTTGCCTGGCATCCTCAAACGAGGCTCTGACT...GGTCCGACTCCCTACTTGGACTTCTGGCACAGAAGGGGCTGAGTGACTCCTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS-3UTR TCA 90 bp | TCCTCTGTATTCAGTAAACAGGCTGCCTCTCCAGGGAGGGCTGCCATTCATTCCGGGTCTTTAATGGGTTaGGCTGGGGAGGGCCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSVFSKQAASPGRAAIHSGSLMG*AGEGLW Trigger: CCACAGGCCCTCCCCAGCTCAACCCATTAAAGACCC...GGAATGAATGGCAGCCCTCCCTGGAGAGGCAGCCTGTTTACTGAATACAGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS-3UTR GCA 90 bp | TCAAGGAGTCACTCAGCCCCTTCTGTGCCAGAAGTCCAAGTAGGGAGTCGGACCCACCTGCTGCAGATGTaGTGGTGTCACATTGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SRSHSAPSVPEVQVGSRTHLLQM*WCHIAH Trigger: GTGGGCAATGTGACACCAGCACATCTGCAGCAGGTG...GGTCCGACTCCCTACTTGGACTTCTGGCACAGAAGGGGCTGAGTGACTCCTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS-3UTR GCA 90 bp | CTCCTGAGCCAGGAAGACAGACATGAATGCATGATGGGACAGGGCCTGGGTCTTAGAAGTGGAAGCCGCTaGTGTCCTGCAGGGACACCT | + |
|
Preference number: 4 (lower is better) Translates to: LLSQEDRHECMMGQGLGLRSGSR*CPAGTP Trigger: AGGTGTCCCTGCAGGACAGCAGCGGCTTCCACTTCT...AAGACCCAGGCCCTGTCCCATCATGCATTCATGTCTGTCTTCCTGGCTCAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS-3UTR CCA 90 bp | CCATTCATTCCAACAGTTCTGGCTTCTTGCTGTAGGACCAAGGGGTTGCCCTGGGAACCACCGCAGAAGTaGAAGCCGCTGCTGTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PFIPTVLASCCRTKGLPWEPPQK*KPLLSC Trigger: GCAGGACAGCAGCGGCTTCCACTTCTGCGGTGGTTC...CCAGGGCAACCCCTTGGTCCTACAGCAAGAAGCCAGAACTGTTGGAATGAATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS-3UTR TCA 90 bp | CAGGCTGCCTCTCCAGGGAGGGCTGCCATTCATTCCAACAGTTCTGGCTTCTTGGCCTCTTCTTTCTCCTaGGCCAGGAAGACAGACATG | + |
|
Preference number: 4 (lower is better) Translates to: QAASPGRAAIHSNSSGFLASSFS*ARKTDM Trigger: CATGTCTGTCTTCCTGGCTCAGGAGAAAGAAGAGGC...CAAGAAGCCAGAACTGTTGGAATGAATGGCAGCCCTCCCTGGAGAGGCAGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS-3UTR GCA 90 bp | ATGGCTACTCTAGGAAGAGCCACTGCTACTCAAGGAGTCACTCAGCCCCTTCTGAGGGGCAAAGCCACCTaGTGCAGATGTGCTGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: MATLGRATATQGVTQPLLRGKAT*CRCAGV Trigger: GACACCAGCACATCTGCAGCAGGTGGCTTTGCCCCT...CAGAAGGGGCTGAGTGACTCCTTGAGTAGCAGTGGCTCTTCCTAGAGTAGCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS-3UTR GCA 90 bp | CCTTCTGTGCCAGAAGTCCAAGTAGGGAGTCGGACCCTCAACAGCCTCTTCTTTGGCACCTGCGCCACCTaGACAGATCATGGAGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PSVPEVQVGSRTLNSLFFGTCAT*TDHGVS Trigger: ACTGACTCCATGATCTGTGCAGGTGGCGCAGGTGCC...AAAGAAGAGGCTGTTGAGGGTCCGACTCCCTACTTGGACTTCTGGCACAGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS-3UTR CCA 90 bp | TGCCTCTCCAGGGAGGGCTGCCATTCATTCCAACAGTTCTGGCTTCTTGCTGTAATGCGTGTTGTGTACTaGGCTGGCGAGGCGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CLSREGCHSFQQFWLLAVMRVVY*AGEASF Trigger: GAAGCTCGCCTCGCCAGCCCAGTACACAACACGCAT...TACAGCAAGAAGCCAGAACTGTTGGAATGAATGGCAGCCCTCCCTGGAGAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS-3UTR GCA 90 bp | AAGAGCCACTGCTACTCAAGGAGTCACTCAGCCCCTTCTGTGCCAGAAGTCCAAGGCAAACTGGCGAGATaGGTGTTGTGTACTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KSHCYSRSHSAPSVPEVQGKLAR*VLCTGL Trigger: CAGCCCAGTACACAACACGCATCTCGCCAGTTTGCC...TTGGACTTCTGGCACAGAAGGGGCTGAGTGACTCCTTGAGTAGCAGTGGCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS-3UTR GCA 90 bp | CTCCTGAGCCAGGAAGACAGACATGAATGCATGATGGGACAGGGCCTGGGTCTTCCAGGAGCCCAACACTaGATTCTCCCCGTTGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLSQEDRHECMMGQGLGLPGAQH*ILPVDN Trigger: ATTGTCAACGGGGAGAATGCAGTGTTGGGCTCCTGG...AAGACCCAGGCCCTGTCCCATCATGCATTCATGTCTGTCTTCCTGGCTCAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS-3UTR GCA 90 bp | TCAAGGAGTCACTCAGCCCCTTCTGTGCCAGAAGTCCAAGTAGGGAGTCGGACCACAGTTCTGGCTTCTTaGTGTAGGACCAAGGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SRSHSAPSVPEVQVGSRTTVLAS*CRTKGL Trigger: CAACCCCTTGGTCCTACAGCAAGAAGCCAGAACTGT...GGTCCGACTCCCTACTTGGACTTCTGGCACAGAAGGGGCTGAGTGACTCCTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS-3UTR CCA 90 bp | AAGAGCCACTGCTACTCAAGGAGTCACTCAGCCCCTTCTGTGCCAGAAGTCCAACCGTTGACAATCCTCTaGCTGAAGCTCAGTGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: KSHCYSRSHSAPSVPEVQPLTIL*LKLSAG Trigger: ACCGGCACTGAGCTTCAGCCAGAGGATTGTCAACGG...TTGGACTTCTGGCACAGAAGGGGCTGAGTGACTCCTTGAGTAGCAGTGGCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS-3UTR CCA 90 bp | CCATTCATTCCAACAGTTCTGGCTTCTTGCTGTAGGACCAAGGGGTTGCCCTGGCCCAGGACAACAAAATaGCGGCCAGGGCTGACATTG | + |
|
Preference number: 4 (lower is better) Translates to: PFIPTVLASCCRTKGLPWPRTTK*RPGLTL Trigger: CAATGTCAGCCCTGGCCGCCATTTTGTTGTCCTGGG...CCAGGGCAACCCCTTGGTCCTACAGCAAGAAGCCAGAACTGTTGGAATGAATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS-3UTR CCA 90 bp | ACGTATCCTCTGTATTCAGTAAACAGGCTGCCTCTCCAGGGAGGGCTGCCATTCTTTAATGGGTTGAGCTaGGGAGGGCCTGTGGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TYPLYSVNRLPLQGGLPFFNGLS*GGPVVS Trigger: GCTCACCACAGGCCCTCCCCAGCTCAACCCATTAAA...GAATGGCAGCCCTCCCTGGAGAGGCAGCCTGTTTACTGAATACAGAGGATACGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS-3UTR TCA 90 bp | TTCTTTCTCCTGAGCCAGGAAGACAGACATGAATGCATGATGGGACAGGGCCTGACAGACATGAATGCATaGTGGGACAGGGCCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FFLLSQEDRHECMMGQGLTDMNA*WDRAWV Trigger: GACCCAGGCCCTGTCCCATCATGCATTCATGTCTGT...CAGGCCCTGTCCCATCATGCATTCATGTCTGTCTTCCTGGCTCAGGAGAAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS-3UTR GCA 90 bp | TCCTCTGTATTCAGTAAACAGGCTGCCTCTCCAGGGAGGGCTGCCATTCATTCCCTGGCTGAAGCTCAGTaGCGGTTTGATGGCAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSVFSKQAASPGRAAIHSLAEAQ*RFDGRN Trigger: ATTCCTGCCATCAAACCGGCACTGAGCTTCAGCCAG...GGAATGAATGGCAGCCCTCCCTGGAGAGGCAGCCTGTTTACTGAATACAGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS-3UTR GCA 90 bp | TCCTCTGTATTCAGTAAACAGGCTGCCTCTCCAGGGAGGGCTGCCATTCATTCCGAGACGGACAGAACCTaGAAGGGCTCTGCGTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSVFSKQAASPGRAAIHSETDRT*KGSAFD Trigger: ATCAAACGCAGAGCCCTTGCAGGTTCTGTCCGTCTC...GGAATGAATGGCAGCCCTCCCTGGAGAGGCAGCCTGTTTACTGAATACAGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS-3UTR CCA 90 bp | TGCCTCTCCAGGGAGGGCTGCCATTCATTCCAACAGTTCTGGCTTCTTGCTGTAGGATGCCAGGCAAACTaGCGAGATGCGTGTTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: CLSREGCHSFQQFWLLAVGCQAN*RDACCV Trigger: TACACAACACGCATCTCGCCAGTTTGCCTGGCATCC...TACAGCAAGAAGCCAGAACTGTTGGAATGAATGGCAGCCCTCCCTGGAGAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS-3UTR CCA 90 bp | CTCTTCTTTCTCCTGAGCCAGGAAGACAGACATGAATGCATGATGGGACAGGGCCATGTGTTTCCCTTCTaGCAGACAAGAGGGCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LFFLLSQEDRHECMMGQGHVFPF*QTRGPP Trigger: CGGAGGCCCTCTTGTCTGCCAGAAGGGAAACACATG...GCCCTGTCCCATCATGCATTCATGTCTGTCTTCCTGGCTCAGGAGAAAGAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS-3UTR TCA 90 bp | TTCTTTCTCCTGAGCCAGGAAGACAGACATGAATGCATGATGGGACAGGGCCTGCCAGGAAGACAGACATaGATGCATGATGGGACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FFLLSQEDRHECMMGQGLPGRQT*MHDGTG Trigger: CCCTGTCCCATCATGCATTCATGTCTGTCTTCCTGG...CAGGCCCTGTCCCATCATGCATTCATGTCTGTCTTCCTGGCTCAGGAGAAAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS-3UTR CCA 90 bp | CAGGCTGCCTCTCCAGGGAGGGCTGCCATTCATTCCAACAGTTCTGGCTTCTTGTCATTCCAACAGTTCTaGCTTCTTGCTGTAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: QAASPGRAAIHSNSSGFLSFQQF*LLAVGP Trigger: TGGTCCTACAGCAAGAAGCCAGAACTGTTGGAATGA...CAAGAAGCCAGAACTGTTGGAATGAATGGCAGCCCTCCCTGGAGAGGCAGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS-3UTR CCA 90 bp | TCATTCCAACAGTTCTGGCTTCTTGCTGTAGGACCAAGGGGTTGCCCTGGAGGAGCACATTGCAGTTTTTaGTGCCCCAGGAGACAATAC | + |
|
Preference number: 4 (lower is better) Translates to: SFQQFWLLAVGPRGCPGGAHCSF*CPRRQY Trigger: GTATTGTCTCCTGGGGCACCAAAAACTGCAATGTGC...TCCTCCAGGGCAACCCCTTGGTCCTACAGCAAGAAGCCAGAACTGTTGGAATGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS-3UTR GCA 90 bp | CCATTCATTCCAACAGTTCTGGCTTCTTGCTGTAGGACCAAGGGGTTGCCCTGGCATTGCAGTTTTTGGTaGCCCAGGAGACAATACCAA | + |
|
Preference number: 4 (lower is better) Translates to: PFIPTVLASCCRTKGLPWHCSFW*PRRQYQ Trigger: TTGGTATTGTCTCCTGGGGCACCAAAAACTGCAATG...CCAGGGCAACCCCTTGGTCCTACAGCAAGAAGCCAGAACTGTTGGAATGAATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS-3UTR GCA 90 bp | TTCTTTCTCCTGAGCCAGGAAGACAGACATGAATGCATGATGGGACAGGGCCTGTCTAGGAAGAGCCACTaGTACTCAAGGAGTCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: FFLLSQEDRHECMMGQGLSRKSH*YSRSHS Trigger: TGAGTGACTCCTTGAGTAGCAGTGGCTCTTCCTAGA...CAGGCCCTGTCCCATCATGCATTCATGTCTGTCTTCCTGGCTCAGGAGAAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS GCA 90 bp | GGTGGGCTGCTGAGGCTGCCCCTAGGCATGACGTACCCAGGACCCTaGCCACCCCTCTGGTGGTGTACCTGCAGGGACACCTGCCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GGLLRLPLGMTYPGP*PPLWWCTCRDTCQG Trigger: GCCCTGGCAGGTGTCCCTGCAGGTACACCACCAGAGGGGTGGGCAGGGTCCTGGGTACGTCATGCCTAGGGGCAGCCTCAGCAGCCCACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000572144.5 ENST00000576915.1 |
||
| CDS TCA 90 bp | CCAGCCGGTGGTGACACACGTGAGGCCTTCAGTCAGAGCCTCGTTTaGGGATGCCAGGCAAACTGGCGAGATGCGTGTTGTGTACTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PAGGDTREAFSQSLV*GCQANWRDACCVLG Trigger: GCCCAGTACACAACACGCATCTCGCCAGTTTGCCTGGCATCCTCAAACGAGGCTCTGACTGAAGGCCTCACGTGTGTCACCACCGGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000571605.1 ENST00000572144.5 ENST00000574481.6 ENST00000576915.1 |
||
| CDS GCA 90 bp | CCGCTCAGCGTCCAGGGTGTTCTGACTGGTGGATGGAATGCTCACTaGGGTCAACTTTGCTGTGAAGGGCCAGGGGCTGTGAGGTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PLSVQGVLTGGWNAH*GQLCCEGPGAVRFW Trigger: CCAGAACCTCACAGCCCCTGGCCCTTCACAGCAAAGTTGACCGCAGTGAGCATTCCATCCACCAGTCAGAACACCCTGGACGCTGAGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000572144.5 |
||
| CDS GCA 90 bp | CAACACTGCATTCTCCCCGTTGACAATCCTCTGGCTGAAGCTCAGTaGCGGTTTGATGGCAGGAATGCCGCAGCCCCAGGAGGAGCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: QHCILPVDNPLAEAQ*RFDGRNAAAPGGAE Trigger: CTCGGCTCCTCCTGGGGCTGCGGCATTCCTGCCATCAAACCGGCACTGAGCTTCAGCCAGAGGATTGTCAACGGGGAGAATGCAGTGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000571044.5 ENST00000574481.6 |
||
| CDS GCA 90 bp | CAGACAAGAGGGCCTCGTTTGAGGATGCCAGGCAAACTGGCGAGATaGGTGTTGTGTACTGGGCTGGCGAGGCGAGCTTCAGCAGCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: QTRGPRLRMPGKLAR*VLCTGLARRASAAS Trigger: TGACGCTGCTGAAGCTCGCCTCGCCAGCCCAGTACACAACACGCATCTCGCCAGTTTGCCTGGCATCCTCAAACGAGGCCCTCTTGTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571044.5 |
||
| CDS GCA 90 bp | GCTAGGGTGTGTAATGGCCTGCACTGCCCACTTTTCCTCCGTGTCTaGAGCCCAGGCACTCACCCGAGAGACGGACAGAACCTGACATTG | + |
|
Preference number: 5 (lower is better) Translates to: ARVCNGLHCPLFLRV*SPGTHPRDGQNLTL Trigger: CAATGTCAGGTTCTGTCCGTCTCTCGGGTGAGTGCCTGGGCTGCAGACACGGAGGAAAAGTGGGCAGTGCAGGCCATTACACACCCTAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000571605.1 |
||
| CDS GCA 90 bp | CTTCAGTCAGAGCCTCGTTTGAGGATGCCAGGCAAACTGGCGAGATaGGTGTTGTGTACTGGGCTGGCGAGGCGAGCTTCAGCAGCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LQSEPRLRMPGKLAR*VLCTGLARRASAAS Trigger: TGACGCTGCTGAAGCTCGCCTCGCCAGCCCAGTACACAACACGCATCTCGCCAGTTTGCCTGGCATCCTCAAACGAGGCTCTGACTGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000571605.1 ENST00000572144.5 ENST00000574481.6 ENST00000576915.1 |
||
| CDS GCA 90 bp | CAGGGTGTTCTGACTGGTGGATGGAATGCTCACTGCGGTCAACTTTaGTGTGAAGGGCCAGGGGCTGTGAGGTTCTGGCAGGCTGGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: QGVLTGGWNAHCGQL*CEGPGAVRFWQAGS Trigger: ACTCCCAGCCTGCCAGAACCTCACAGCCCCTGGCCCTTCACAGCAAAGTTGACCGCAGTGAGCATTCCATCCACCAGTCAGAACACCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000572144.5 |
||
| CDS CCA 90 bp | CACTGCGGTCAACTTTGCTGTGAAGGGCCAGGGGCTGTGAGGTTCTaGCAGGCTGGGAGTCCTAACACATCATCGCAGTGGTTCCTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: HCGQLCCEGPGAVRF*QAGSPNTSSQWFLV Trigger: GACGAGGAACCACTGCGATGATGTGTTAGGACTCCCAGCCTGCCAGAACCTCACAGCCCCTGGCCCTTCACAGCAAAGTTGACCGCAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000572144.5 |
||
| CDS CCA 90 bp | AAGCTCAGTGCCGGTTTGATGGCAGGAATGCCGCAGCCTGGCCATTaGGCTAATGAGGACCTGCTTCCCATGCCTCAGCCCATCTTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: KLSAGLMAGMPQPGH*ANEDLLPMPQPIFP Trigger: GGGAAAGATGGGCTGAGGCATGGGAAGCAGGTCCTCATTAGCCCAATGGCCAGGCTGCGGCATTCCTGCCATCAAACCGGCACTGAGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000572144.5 ENST00000575302.1 ENST00000576915.1 |
||
| CDS-3UTR CAA 90 bp | CAGGCTGCCTCTCCAGGGAGGGCTGCCATTCATTCCAACAGTTCTGGCTTCTTGGCAGGTGCGCGCACATaGCAGTTTTTGGTGCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QAASPGRAAIHSNSSGFLAGART*QFLVPQ Trigger: CTGGGGCACCAAAAACTGCAATGTGCGCGCACCTGC...CAAGAAGCCAGAACTGTTGGAATGAATGGCAGCCCTCCCTGGAGAGGCAGCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS CCA 90 bp | TTTCAGAGAAGGCCGCTCAGCGTCCAGGGTGTTCTGACTGGTGGATaGAATGCTCACTGCGGTCAACTTTGCTGTGAAGGGCCAGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: FQRRPLSVQGVLTGG*NAHCGQLCCEGPGA Trigger: AGCCCCTGGCCCTTCACAGCAAAGTTGACCGCAGTGAGCATTCCATCCACCAGTCAGAACACCCTGGACGCTGAGCGGCCTTCTCTGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000572144.5 |
||
| CDS-3UTR CAA 90 bp | TACTCTAGGAAGAGCCACTGCTACTCAAGGAGTCACTCAGCCCCTTCTGTGCCACTGGCGAGATGCGTGTaGTGTACTGGGCTGGCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: YSRKSHCYSRSHSAPSVPLARCV*CTGLAR Trigger: CCTCGCCAGCCCAGTACACAACACGCATCTCGCCAG...TGGCACAGAAGGGGCTGAGTGACTCCTTGAGTAGCAGTGGCTCTTCCTAGAGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS TCA 90 bp | AGGCACCAGGCTTTCAGAGAAGGCCGCTCAGCGTCCAGGGTGTTCTaGCTGGTGGATGGAATGCTCACTGCGGTCAACTTTGCTGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RHQAFREGRSASRVF*LVDGMLTAVNFAVK Trigger: CTTCACAGCAAAGTTGACCGCAGTGAGCATTCCATCCACCAGTCAGAACACCCTGGACGCTGAGCGGCCTTCTCTGAAAGCCTGGTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000572144.5 |
||
| CDS TCA 90 bp | CAGATCATGGAGTCAGTGATACTTGAGCCCCAGTACTGCCGGCACTaGTTCACAGTGACCAGGGGCAAAGCCACCTGCTGCAGATGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: QIMESVILEPQYCRH*FTVTRGKATCCRCA Trigger: AGCACATCTGCAGCAGGTGGCTTTGCCCCTGGTCACTGTGAATCAGTGCCGGCAGTACTGGGGCTCAAGTATCACTGACTCCATGATCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000571605.1 ENST00000572144.5 ENST00000574481.6 ENST00000576915.1 |
||
| CDS-3UTR CAA 90 bp | CCAACAGTTCTGGCTTCTTGCTGTAGGACCAAGGGGTTGCCCTGGAGGAGGGGTAGCAGCGTCACGTCATaGTTCATGGTGGTAGAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PTVLASCCRTKGLPWRRGSSVTS*FMVVEF Trigger: GAACTCTACCACCATGAACAATGACGTGACGCTGCT...ACCCCTCCTCCAGGGCAACCCCTTGGTCCTACAGCAAGAAGCCAGAACTGTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS-3UTR CAA 90 bp | CAGGCTGCCTCTCCAGGGAGGGCTGCCATTCATTCCAACAGTTCTGGCTTCTTGACTGCATTCTCCCCGTaGACAATCCTCTGGCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QAASPGRAAIHSNSSGFLTAFSP*TILWLK Trigger: CTTCAGCCAGAGGATTGTCAACGGGGAGAATGCAGT...CAAGAAGCCAGAACTGTTGGAATGAATGGCAGCCCTCCCTGGAGAGGCAGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS-3UTR CAA 90 bp | CTCAACAGCCTCTTCTTTCTCCTGAGCCAGGAAGACAGACATGAATGCATGATGTGTAGGACCAAGGGGTaGCCCTGGAGGAGGGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LNSLFFLLSQEDRHECMMCRTKG*PWRRGG Trigger: CCCACCCCTCCTCCAGGGCAACCCCTTGGTCCTACA...CATCATGCATTCATGTCTGTCTTCCTGGCTCAGGAGAAAGAAGAGGCTGTTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS-3UTR CAA 90 bp | TACTCTAGGAAGAGCCACTGCTACTCAAGGAGTCACTCAGCCCCTTCTGTGCCACAGTCAGAGCCTCGTTaGAGGATGCCAGGCAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: YSRKSHCYSRSHSAPSVPQSEPR*RMPGKL Trigger: CAGTTTGCCTGGCATCCTCAAACGAGGCTCTGACTG...TGGCACAGAAGGGGCTGAGTGACTCCTTGAGTAGCAGTGGCTCTTCCTAGAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS-3UTR CAA 90 bp | TTCTTTCTCCTGAGCCAGGAAGACAGACATGAATGCATGATGGGACAGGGCCTGAAGCTCAGTGCCGGTTaGATGGCAGGAATGCCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: FFLLSQEDRHECMMGQGLKLSAG*MAGMPQ Trigger: CTGCGGCATTCCTGCCATCAAACCGGCACTGAGCTT...CAGGCCCTGTCCCATCATGCATTCATGTCTGTCTTCCTGGCTCAGGAGAAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS-3UTR CAA 90 bp | CCTTCTGTGCCAGAAGTCCAAGTAGGGAGTCGGACCCTCAACAGCCTCTTCTTTGCAAGGGCTCTGCGTTaGATGATCGGTCATACTCGC | + |
|
Preference number: 5 (lower is better) Translates to: PSVPEVQVGSRTLNSLFFARALR*MIGHTR Trigger: GCGAGTATGACCGATCATCAAACGCAGAGCCCTTGC...AAAGAAGAGGCTGTTGAGGGTCCGACTCCCTACTTGGACTTCTGGCACAGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS-3UTR CAA 90 bp | CAGGCTGCCTCTCCAGGGAGGGCTGCCATTCATTCCAACAGTTCTGGCTTCTTGCGCACATTGCAGTTTTaGGTGCCCCAGGAGACAATA | + |
|
Preference number: 5 (lower is better) Translates to: QAASPGRAAIHSNSSGFLRTLQF*VPQETI Trigger: TATTGTCTCCTGGGGCACCAAAAACTGCAATGTGCG...CAAGAAGCCAGAACTGTTGGAATGAATGGCAGCCCTCCCTGGAGAGGCAGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS GCA 90 bp | CTGGTCTCTCTGCCCCCTCCCGACCTGAACAGTTCATACCCTTCATaGAGCCAGAAGGTTCTTTCTAAAAGACATGGACAGGTCTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LVSLPPPDLNSSYPS*SQKVLSKRHGQVFL Trigger: CAGGAAGACCTGTCCATGTCTTTTAGAAAGAACCTTCTGGCTGCATGAAGGGTATGAACTGTTCAGGTCGGGAGGGGGCAGAGAGACCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000572144.5 ENST00000575302.1 |
||
| CDS GCA 90 bp | GGGGTTTGGAGATGTGGGCCTTTGATAGACCCACTTGGGCCTTCATaGCATGGCCTGTGGATGGAGAATGTGCAGTTATTTATTATGCGT | + |
|
Preference number: 5 (lower is better) Translates to: GVWRCGPLIDPLGPS*HGLWMENVQLFIMR Trigger: ACGCATAATAAATAACTGCACATTCTCCATCCACAGGCCATGGCATGAAGGCCCAAGTGGGTCTATCAAAGGCCCACATCTCCAAACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000573845.1 |
||
| CDS-3UTR CAA 90 bp | CCATTCATTCCAACAGTTCTGGCTTCTTGCTGTAGGACCAAGGGGTTGCCCTGGATCCAGGTGCTGAACTaGCTAACTCGAGTATACACA | + |
|
Preference number: 5 (lower is better) Translates to: PFIPTVLASCCRTKGLPWIQVLN*LTRVYT Trigger: TGTGTATACTCGAGTTAGCAAGTTCAGCACCTGGAT...CCAGGGCAACCCCTTGGTCCTACAGCAAGAAGCCAGAACTGTTGGAATGAATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000574481.6 |
||
| CDS CCA 90 bp | TTGGAGATGTGGGCCTTTGATAGACCCACTTGGGCCTTCATGCCATaGCCTGTGGATGGAGAATGTGCAGTTATTTATTATGCGTATTCA | + |
|
Preference number: 5 (lower is better) Translates to: LEMWAFDRPTWAFMP*PVDGECAVIYYAYS Trigger: TGAATACGCATAATAAATAACTGCACATTCTCCATCCACAGGCCATGGCATGAAGGCCCAAGTGGGTCTATCAAAGGCCCACATCTCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000573845.1 |
||
| CDS CCA 90 bp | TGTGGGCCTTTGATAGACCCACTTGGGCCTTCATGCCATGGCCTGTaGATGGAGAATGTGCAGTTATTTATTATGCGTATTCAGTTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: CGPLIDPLGPSCHGL*MENVQLFIMRIQFV Trigger: TACAAACTGAATACGCATAATAAATAACTGCACATTCTCCATCCACAGGCCATGGCATGAAGGCCCAAGTGGGTCTATCAAAGGCCCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000573845.1 |
||
| CDS GCA 72 bp | CTGAGGCTGCCCCTAGGCATGACGTACCCAGGACCCTaGCCACCCCTCTGGTGGTGTACCTGCAGGGACACC | + |
|
Preference number: 6 (lower is better) Translates to: LRLPLGMTYPGP*PPLWWCTCRDT Trigger: GGTGTCCCTGCAGGTACACCACCAGAGGGGTGGGCAGGGTCCTGGGTACGTCATGCCTAGGGGCAGCCTCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000572144.5 ENST00000576915.1 |
||
| CDS CCA 72 bp | CCGCCTGGCTGTGCACACATGCAGCACGACCCAGCCTaGCCACACACTGTGGTGCCATCTGGGTCCGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: PPGCAHMQHDPA*PHTVVPSGSDA Trigger: GGCATCGGACCCAGATGGCACCACAGTGTGTGGCCAGGCTGGGTCGTGCTGCATGTGTGCACAGCCAGGCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000573845.1 |
||
| CDS CAA 90 bp | TCCAGCCAGCCTAGCTCCTTCCCTGGGCTGTTGCTGGGAGCTGAGTaGCTCCCAGGGCTGAATCAGGGCTGGTCCTGGCCCACTCACCCC | + |
|
Preference number: 6 (lower is better) Translates to: SSQPSSFPGLLLGAE*LPGLNQGWSWPTHP Trigger: GGGGTGAGTGGGCCAGGACCAGCCCTGATTCAGCCCTGGGAGCAACTCAGCTCCCAGCAACAGCCCAGGGAAGGAGCTAGGCTGGCTGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000572144.5 |
||
| CDS TCA 72 bp | CTGGGCTGTTGCTGGGAGCTGAGTTGCTCCCAGGGCTaGATCAGGGCTGGTCCTGGCCCACTCACCCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LGCCWELSCSQG*IRAGPGPLTPG Trigger: TCCTGGGGTGAGTGGGCCAGGACCAGCCCTGATTCAGCCCTGGGAGCAACTCAGCTCCCAGCAACAGCCCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000572144.5 |
||
| CDS GCA 72 bp | CACAGTGACCAGGGGCAAAGCCACCTGCTGCAGATGTaGTGGTGTCACATTGCCCACGCCACTGAGGCGACC | + |
|
Preference number: 6 (lower is better) Translates to: HSDQGQSHLLQM*WCHIAHATEAT Trigger: GGTCGCCTCAGTGGCGTGGGCAATGTGACACCAGCACATCTGCAGCAGGTGGCTTTGCCCCTGGTCACTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000571605.1 ENST00000572144.5 ENST00000574481.6 ENST00000576915.1 |
||
| CDS CCA 72 bp | GCCGGTTTGATGGCAGGAATGCCGCAGCCTGGCCATTaGGCTAATGAGGACCTGCTTCCCATGCCTCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: AGLMAGMPQPGH*ANEDLLPMPQP Trigger: GGGCTGAGGCATGGGAAGCAGGTCCTCATTAGCCCAATGGCCAGGCTGCGGCATTCCTGCCATCAAACCGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000572144.5 ENST00000575302.1 ENST00000576915.1 |
||
| CDS CAA 90 bp | GCATTCTCCCCGTTGACAATCCTCTGGCTGAAGCTCAGTGCCGGTTaGATGGCAGGAATGCCGCAGCCCCAGGAGGAGCCGAGGAGAACC | + |
|
Preference number: 6 (lower is better) Translates to: AFSPLTILWLKLSAG*MAGMPQPQEEPRRT Trigger: GGTTCTCCTCGGCTCCTCCTGGGGCTGCGGCATTCCTGCCATCAAACCGGCACTGAGCTTCAGCCAGAGGATTGTCAACGGGGAGAATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000571044.5 ENST00000574481.6 |
||
| CDS GCA 72 bp | GAATGCCGCAGCCTGGCCATTGGGCTAATGAGGACCTaGTTCCCATGCCTCAGCCCATCTTTCCCCACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ECRSLAIGLMRT*FPCLSPSFPTS Trigger: GGAGGTGGGGAAAGATGGGCTGAGGCATGGGAAGCAGGTCCTCATTAGCCCAATGGCCAGGCTGCGGCATTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000572144.5 ENST00000575302.1 ENST00000576915.1 |
||
| CDS GCA 72 bp | GGGCCTCGTTTGAGGATGCCAGGCAAACTGGCGAGATaGGTGTTGTGTACTGGGCTGGCGAGGCGAGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: GPRLRMPGKLAR*VLCTGLARRAS Trigger: TGAAGCTCGCCTCGCCAGCCCAGTACACAACACGCATCTCGCCAGTTTGCCTGGCATCCTCAAACGAGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571044.5 |
||
| CDS CCA 72 bp | GATGCCAGGCAAACTGGCGAGATGCGTGTTGTGTACTaGGCTGGCGAGGCGAGCTTCAGCAGCGTCACGTCA | + |
|
Preference number: 6 (lower is better) Translates to: DARQTGEMRVVY*AGEASFSSVTS Trigger: TGACGTGACGCTGCTGAAGCTCGCCTCGCCAGCCCAGTACACAACACGCATCTCGCCAGTTTGCCTGGCATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000571044.5 ENST00000571605.1 ENST00000572144.5 ENST00000574481.6 ENST00000576915.1 |
||
| CDS CAA 72 bp | CGTTTGAGGATGCCAGGCAAACTGGCGAGATGCGTGTaGTGTACTGGGCTGGCGAGGCGAGCTTCAGCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: RLRMPGKLARCV*CTGLARRASAA Trigger: CGCTGCTGAAGCTCGCCTCGCCAGCCCAGTACACAACACGCATCTCGCCAGTTTGCCTGGCATCCTCAAACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000571044.5 ENST00000571605.1 ENST00000572144.5 ENST00000574481.6 ENST00000576915.1 |
||
| CDS CAA 72 bp | GGGTACATGCAAGCACCTTCGGGCCCCACAGCTATCTaGGTTATCCCTATCCACCCAGTCCCCCAGCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GYMQAPSGPTAI*VIPIHPVPQPC Trigger: GCAGGGCTGGGGGACTGGGTGGATAGGGATAACCAAGATAGCTGTGGGGCCCGAAGGTGCTTGCATGTACCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000572144.5 ENST00000575302.1 ENST00000576915.1 |
||
| CDS CAA 90 bp | AGAGGGCCTCGTTTGAGGATGCCAGGCAAACTGGCGAGATGCGTGTaGTGTACTGGGCTGGCGAGGCGAGCTTCAGCAGCGTCACGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: RGPRLRMPGKLARCV*CTGLARRASAASRH Trigger: ATGACGTGACGCTGCTGAAGCTCGCCTCGCCAGCCCAGTACACAACACGCATCTCGCCAGTTTGCCTGGCATCCTCAAACGAGGCCCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000571044.5 |
||
| CDS GCA 72 bp | TGTAATGGCCTGCACTGCCCACTTTTCCTCCGTGTCTaGAGCCCAGGCACTCACCCGAGAGACGGACAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: CNGLHCPLFLRV*SPGTHPRDGQN Trigger: GTTCTGTCCGTCTCTCGGGTGAGTGCCTGGGCTGCAGACACGGAGGAAAAGTGGGCAGTGCAGGCCATTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000571605.1 |
||
| CDS GCA 72 bp | GAGCCTCGTTTGAGGATGCCAGGCAAACTGGCGAGATaGGTGTTGTGTACTGGGCTGGCGAGGCGAGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: EPRLRMPGKLAR*VLCTGLARRAS Trigger: TGAAGCTCGCCTCGCCAGCCCAGTACACAACACGCATCTCGCCAGTTTGCCTGGCATCCTCAAACGAGGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000571605.1 ENST00000572144.5 ENST00000574481.6 ENST00000576915.1 |
||
| CDS CAA 72 bp | CCGTTGACAATCCTCTGGCTGAAGCTCAGTGCCGGTTaGATGGCAGGAATGCCGCAGCCTGGCCATTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: PLTILWLKLSAG*MAGMPQPGHWA Trigger: AGCCCAATGGCCAGGCTGCGGCATTCCTGCCATCAAACCGGCACTGAGCTTCAGCCAGAGGATTGTCAACGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000572144.5 ENST00000575302.1 ENST00000576915.1 |
||
| CDS CAA 72 bp | TGCCAGGGCCAGGAGCCCAACACTGCATTCTCCCCGTaGACAATCCTCTGGCTGAAGCTCAGTGCCGGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: CQGQEPNTAFSP*TILWLKLSAGL Trigger: CAAACCGGCACTGAGCTTCAGCCAGAGGATTGTCAACGGGGAGAATGCAGTGTTGGGCTCCTGGCCCTGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000571044.5 ENST00000572144.5 ENST00000574481.6 ENST00000575302.1 ENST00000576915.1 |
||
| CDS CAA 90 bp | TCAGAGCCTCGTTTGAGGATGCCAGGCAAACTGGCGAGATGCGTGTaGTGTACTGGGCTGGCGAGGCGAGCTTCAGCAGCGTCACGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: SEPRLRMPGKLARCV*CTGLARRASAASRH Trigger: ATGACGTGACGCTGCTGAAGCTCGCCTCGCCAGCCCAGTACACAACACGCATCTCGCCAGTTTGCCTGGCATCCTCAAACGAGGCTCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000571605.1 ENST00000572144.5 ENST00000574481.6 ENST00000576915.1 |
||
| CDS CAA 90 bp | GCATTCTCCCCGTTGACAATCCTCTGGCTGAAGCTCAGTGCCGGTTaGATGGCAGGAATGCCGCAGCCTGGCCATTGGGCTAATGAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: AFSPLTILWLKLSAG*MAGMPQPGHWANED Trigger: GTCCTCATTAGCCCAATGGCCAGGCTGCGGCATTCCTGCCATCAAACCGGCACTGAGCTTCAGCCAGAGGATTGTCAACGGGGAGAATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000572144.5 ENST00000575302.1 ENST00000576915.1 |
||
| CDS TCA 72 bp | GAGTCAGTGATACTTGAGCCCCAGTACTGCCGGCACTaGTTCACAGTGACCAGGGGCAAAGCCACCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ESVILEPQYCRH*FTVTRGKATCC Trigger: GCAGCAGGTGGCTTTGCCCCTGGTCACTGTGAATCAGTGCCGGCAGTACTGGGGCTCAAGTATCACTGACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000571605.1 ENST00000572144.5 ENST00000574481.6 ENST00000576915.1 |
||
| CDS GCA 72 bp | CTGACTGGTGGATGGAATGCTCACTGCGGTCAACTTTaGTGTGAAGGGCCAGGGGCTGTGAGGTTCTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LTGGWNAHCGQL*CEGPGAVRFWQ Trigger: CTGCCAGAACCTCACAGCCCCTGGCCCTTCACAGCAAAGTTGACCGCAGTGAGCATTCCATCCACCAGTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000572144.5 |
||
| CDS GCA 72 bp | GTCCAGGGTGTTCTGACTGGTGGATGGAATGCTCACTaGGGTCAACTTTGCTGTGAAGGGCCAGGGGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: VQGVLTGGWNAH*GQLCCEGPGAV Trigger: CACAGCCCCTGGCCCTTCACAGCAAAGTTGACCGCAGTGAGCATTCCATCCACCAGTCAGAACACCCTGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000572144.5 |
||
| CDS CCA 72 bp | CAACTTTGCTGTGAAGGGCCAGGGGCTGTGAGGTTCTaGCAGGCTGGGAGTCCTAACACATCATCGCAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: QLCCEGPGAVRF*QAGSPNTSSQW Trigger: CCACTGCGATGATGTGTTAGGACTCCCAGCCTGCCAGAACCTCACAGCCCCTGGCCCTTCACAGCAAAGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000572144.5 |
||
| CDS CCA 72 bp | AGGCCGCTCAGCGTCCAGGGTGTTCTGACTGGTGGATaGAATGCTCACTGCGGTCAACTTTGCTGTGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: RPLSVQGVLTGG*NAHCGQLCCEG Trigger: CCCTTCACAGCAAAGTTGACCGCAGTGAGCATTCCATCCACCAGTCAGAACACCCTGGACGCTGAGCGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000572144.5 |
||
| CDS TCA 72 bp | GGTGACACACGTGAGGCCTTCAGTCAGAGCCTCGTTTaGGGATGCCAGGCAAACTGGCGAGATGCGTGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: GDTREAFSQSLV*GCQANWRDACC Trigger: ACAACACGCATCTCGCCAGTTTGCCTGGCATCCTCAAACGAGGCTCTGACTGAAGGCCTCACGTGTGTCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000571605.1 ENST00000572144.5 ENST00000574481.6 ENST00000576915.1 |
||
| CDS CCA 72 bp | TCAGAGAAGGCCGCTCAGCGTCCAGGGTGTTCTGACTaGTGGATGGAATGCTCACTGCGGTCAACTTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SEKAAQRPGCSD*WMECSLRSTLL Trigger: CAGCAAAGTTGACCGCAGTGAGCATTCCATCCACCAGTCAGAACACCCTGGACGCTGAGCGGCCTTCTCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000572144.5 |
||
| CDS CAA 90 bp | AGGCTTAGGGTCAGGCTGAGCAGCAACATCGTGGCAGATGTGAGGTaGGGAGCTGGGTCTGGCTTTATGGGTCTTCTCGTCCTTGAGCTA | + |
|
Preference number: 6 (lower is better) Translates to: RLRVRLSSNIVADVR*GAGSGFMGLLVLEL Trigger: TAGCTCAAGGACGAGAAGACCCATAAAGCCAGACCCAGCTCCCAACCTCACATCTGCCACGATGTTGCTGCTCAGCCTGACCCTAAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000572144.5 ENST00000576408.1 |
||
| CDS TCA 72 bp | TGCGCCACCTGCACAGATCATGGAGTCAGTGATACTTaGGCCCCAGTACTGCCGGCACTGATTCACAGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: CATCTDHGVSDT*APVLPALIHSD Trigger: GTCACTGTGAATCAGTGCCGGCAGTACTGGGGCTCAAGTATCACTGACTCCATGATCTGTGCAGGTGGCGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000571605.1 ENST00000572144.5 ENST00000574481.6 ENST00000576915.1 |
||
| CDS TCA 72 bp | GCTTTCAGAGAAGGCCGCTCAGCGTCCAGGGTGTTCTaGCTGGTGGATGGAATGCTCACTGCGGTCAACTTT | + |
|
Preference number: 6 (lower is better) Translates to: AFREGRSASRVF*LVDGMLTAVNF Trigger: AAAGTTGACCGCAGTGAGCATTCCATCCACCAGTCAGAACACCCTGGACGCTGAGCGGCCTTCTCTGAAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000572144.5 |
||
| CDS GCA 72 bp | CTAGGGTGTGTAATGGCCCGAGAGACGGACAGAACCTaGAAGGGCTCTGCGTTTGATGATCGGTCATACTCG | + |
|
Preference number: 6 (lower is better) Translates to: LGCVMARETDRT*KGSAFDDRSYS Trigger: CGAGTATGACCGATCATCAAACGCAGAGCCCTTGCAGGTTCTGTCCGTCTCTCGGGCCATTACACACCCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000571044.5 ENST00000572144.5 ENST00000574481.6 ENST00000576915.1 |
||
| CDS CCA 72 bp | GAGCCCAACACTGCATTCTCCCCGTTGACAATCCTCTaGCTGAAGCTCAGTGCCGGTTTGATGGCAGGAATG | + |
|
Preference number: 6 (lower is better) Translates to: EPNTAFSPLTIL*LKLSAGLMAGM Trigger: CATTCCTGCCATCAAACCGGCACTGAGCTTCAGCCAGAGGATTGTCAACGGGGAGAATGCAGTGTTGGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000571044.5 ENST00000572144.5 ENST00000574481.6 ENST00000575302.1 ENST00000576915.1 |
||
| CDS CCA 72 bp | TTTGATGATCGGTCATACTCGCCCAGGACAACAAAATaGCGGCCAGGGCTGACATTGCAGTGGGCAGCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: FDDRSYSPRTTK*RPGLTLQWAAV Trigger: CACTGCTGCCCACTGCAATGTCAGCCCTGGCCGCCATTTTGTTGTCCTGGGCGAGTATGACCGATCATCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000571044.5 ENST00000572144.5 ENST00000574481.6 ENST00000576408.1 ENST00000576915.1 |
||
| CDS CAA 72 bp | CCCGAGAGACGGACAGAACCTGCAAGGGCTCTGCGTTaGATGATCGGTCATACTCGCCCAGGACAACAAAAT | + |
|
Preference number: 6 (lower is better) Translates to: PERRTEPARALR*MIGHTRPGQQN Trigger: ATTTTGTTGTCCTGGGCGAGTATGACCGATCATCAAACGCAGAGCCCTTGCAGGTTCTGTCCGTCTCTCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000571044.5 ENST00000572144.5 ENST00000574481.6 ENST00000576915.1 |
||
| CDS GCA 72 bp | CTGCCCCCTCCCGACCTGAACAGTTCATACCCTTCATaGAGCCAGAAGGTTCTTTCTAAAAGACATGGACAG | + |
|
Preference number: 6 (lower is better) Translates to: LPPPDLNSSYPS*SQKVLSKRHGQ Trigger: CTGTCCATGTCTTTTAGAAAGAACCTTCTGGCTGCATGAAGGGTATGAACTGTTCAGGTCGGGAGGGGGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000572144.5 ENST00000575302.1 |
||
| CDS CAA 72 bp | CGAGTATACACAGCAGGTGCGCGCACATTGCAGTTTTaGGTGCCCCAGGAGACAATACCAATAAGCACCCAT | + |
|
Preference number: 6 (lower is better) Translates to: RVYTAGARTLQF*VPQETIPISTH Trigger: ATGGGTGCTTATTGGTATTGTCTCCTGGGGCACCAAAAACTGCAATGTGCGCGCACCTGCTGTGTATACTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000571044.5 ENST00000572144.5 ENST00000574481.6 ENST00000576915.1 |
||
| CDS CAA 90 bp | TTGCTAACTCGAGTATACACAGCAGGTGCGCGCACATTGCAGTTTTaGGTGCCCCAGGAGACAATACCAATAAGCACCCATGTGTTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: LLTRVYTAGARTLQF*VPQETIPISTHVFP Trigger: GGGAAACACATGGGTGCTTATTGGTATTGTCTCCTGGGGCACCAAAAACTGCAATGTGCGCGCACCTGCTGTGTATACTCGAGTTAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000571044.5 ENST00000572144.5 ENST00000574481.6 ENST00000576915.1 |
||
| CDS CAA 90 bp | GTGCTGAACTTGCTAACTCGAGTATACACAGCAGGTGCGCGCACATaGCAGTTTTTGGTGCCCCAGGAGACAATACCAATAAGCACCCAT | + |
|
Preference number: 6 (lower is better) Translates to: VLNLLTRVYTAGART*QFLVPQETIPISTH Trigger: ATGGGTGCTTATTGGTATTGTCTCCTGGGGCACCAAAAACTGCAATGTGCGCGCACCTGCTGTGTATACTCGAGTTAGCAAGTTCAGCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000571044.5 ENST00000572144.5 ENST00000574481.6 ENST00000576915.1 |
||
| CDS CAA 72 bp | TTGCTAACTCGAGTATACACAGCAGGTGCGCGCACATaGCAGTTTTTGGTGCCCCAGGAGACAATACCAATA | + |
|
Preference number: 6 (lower is better) Translates to: LLTRVYTAGART*QFLVPQETIPI Trigger: TATTGGTATTGTCTCCTGGGGCACCAAAAACTGCAATGTGCGCGCACCTGCTGTGTATACTCGAGTTAGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000571044.5 ENST00000572144.5 ENST00000574481.6 ENST00000576915.1 |
||
| CDS CCA 72 bp | TTGATAGACCCACTTGGGCCTTCATGCCATGGCCTGTaGATGGAGAATGTGCAGTTATTTATTATGCGTATT | + |
|
Preference number: 6 (lower is better) Translates to: LIDPLGPSCHGL*MENVQLFIMRI Trigger: AATACGCATAATAAATAACTGCACATTCTCCATCCACAGGCCATGGCATGAAGGCCCAAGTGGGTCTATCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000573845.1 |
||