Pregenerated sensors for CTRB2 (Homo sapiens)
Ensembl gene IDs: ENSG00000168928Ensembl transcript IDs: ENST00000303037.13, ENST00000481611.1, ENST00000562106.5, ENST00000562387.1, ENST00000567767.5, ENST00000643904.2, ENST00000644725.2
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | ATGCATTTAATGGGAAATCTTAAGGCAGGGGTGGCAGGAGCTGCGGGCTCAGTTCCACGTCGGAGGTCCTaGCCCCGCAGTGGGCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: MHLMGNLKAGVAGAAGSVPRRRS*PRSGQR Trigger: CCGCTGCCCACTGCGGGGTCAGGACCTCCGACGTGG...AACTGAGCCCGCAGCTCCTGCCACCCCTGCCTTAAGATTTCCCATTAAATGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567767.5 |
||
| CDS-3UTR TCA 90 bp | AAACAGATGCATTTAATGGGAAATCTTAAGGCAGGGGTGGCAGGAGCTGCGGGCCCACGTCGGAGGTCCTaGCCCCGCAGTGGGCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: KQMHLMGNLKAGVAGAAGPRRRS*PRSGQR Trigger: CCGCTGCCCACTGCGGGGTCAGGACCTCCGACGTGG...GCCCGCAGCTCCTGCCACCCCTGCCTTAAGATTTCCCATTAAATGCATCTGTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000303037.13 ENST00000567767.5 ENST00000643904.2 ENST00000644725.2 |
||
| CDS-3UTR CCA 90 bp | AAACAGATGCATTTAATGGGAAATCTTAAGGCAGGGGTGGCAGGAGCTGCGGGCCCCCGCAGCCGAAGGTaGTACCCAGGAGGGCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KQMHLMGNLKAGVAGAAGPRSRR*YPGGPS Trigger: GCTGGGCCCTCCTGGGTACCACCTTCGGCTGCGGGG...GCCCGCAGCTCCTGCCACCCCTGCCTTAAGATTTCCCATTAAATGCATCTGTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000303037.13 |
||
| CDS-3UTR CCA 90 bp | ATGCATTTAATGGGAAATCTTAAGGCAGGGGTGGCAGGAGCTGCGGGCTCAGTTCCTCCAGAGTCACCCTaGCCAGGGCCTGGGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: MHLMGNLKAGVAGAAGSVPPESP*PGPGQG Trigger: GCCCTGCCCAGGCCCTGGCCAGGGTGACTCTGGAGG...AACTGAGCCCGCAGCTCCTGCCACCCCTGCCTTAAGATTTCCCATTAAATGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000562387.1 |
||
| CDS-3UTR TCA 90 bp | TCTAAACAGATGCATTTAATGGGAAATCTTAAGGCAGGGGTGGCAGGAGCTGCGCCACGTCGGAGGTCCTaGCCCCGCAGTGGGCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SKQMHLMGNLKAGVAGAAPRRRS*PRSGQR Trigger: CCGCTGCCCACTGCGGGGTCAGGACCTCCGACGTGG...CGCAGCTCCTGCCACCCCTGCCTTAAGATTTCCCATTAAATGCATCTGTTTAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000303037.13 ENST00000567767.5 ENST00000643904.2 ENST00000644725.2 |
||
| CDS-3UTR CCA 90 bp | ATGCATTTAATGGGAAATCTTAAGGCAGGGGTGGCAGGAGCTGCGGGCTCAGTTATCTTAAGGCAGGGGTaGCAGGAGCTGCGGGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: MHLMGNLKAGVAGAAGSVILRQG*QELRAQ Trigger: CTGAGCCCGCAGCTCCTGCCACCCCTGCCTTAAGAT...AACTGAGCCCGCAGCTCCTGCCACCCCTGCCTTAAGATTTCCCATTAAATGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000562387.1 ENST00000567767.5 |
||
| CDS-3UTR CCA 90 bp | AAACAGATGCATTTAATGGGAAATCTTAAGGCAGGGGTGGCAGGAGCTGCGGGCATCTTAAGGCAGGGGTaGCAGGAGCTGCGGGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KQMHLMGNLKAGVAGAAGILRQG*QELRAQ Trigger: CTGAGCCCGCAGCTCCTGCCACCCCTGCCTTAAGAT...GCCCGCAGCTCCTGCCACCCCTGCCTTAAGATTTCCCATTAAATGCATCTGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000303037.13 ENST00000562106.5 ENST00000562387.1 ENST00000567767.5 ENST00000643904.2 ENST00000644725.2 |
||
| CDS-3UTR CCA 90 bp | TCTAAACAGATGCATTTAATGGGAAATCTTAAGGCAGGGGTGGCAGGAGCTGCGGCCAGAGGAAAGCCATaGTGCCGCTGGCAGGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SKQMHLMGNLKAGVAGAAARGKP*CRWQGC Trigger: ACACCCCTGCCAGCGGCACCATGGCTTTCCTCTGGC...CGCAGCTCCTGCCACCCCTGCCTTAAGATTTCCCATTAAATGCATCTGTTTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303037.13 |
||
| CDS-3UTR CCA 90 bp | TCTAAACAGATGCATTTAATGGGAAATCTTAAGGCAGGGGTGGCAGGAGCTGCGATCTTAAGGCAGGGGTaGCAGGAGCTGCGGGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SKQMHLMGNLKAGVAGAAILRQG*QELRAQ Trigger: CTGAGCCCGCAGCTCCTGCCACCCCTGCCTTAAGAT...CGCAGCTCCTGCCACCCCTGCCTTAAGATTTCCCATTAAATGCATCTGTTTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000303037.13 ENST00000562106.5 ENST00000567767.5 ENST00000643904.2 ENST00000644725.2 |
||
| CDS CCA 90 bp | GAGCCGGTGACTCGCCCAGGCCCACACTGCGGTGCACAGCTGAACTaGGAGCTGGGACCCTGCTGCCTCTTGCTGGCCTCGGGGCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: EPVTRPGPHCGAQLN*ELGPCCLLLASGLG Trigger: TCCCAGCCCCGAGGCCAGCAAGAGGCAGCAGGGTCCCAGCTCCCAGTTCAGCTGTGCACCGCAGTGTGGGCCTGGGCGAGTCACCGGCTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481611.1 |
||
| CDS TCA 90 bp | GGGAGCTGGGACCCTGCTGCCTCTTGCTGGCCTCGGGGCTGGGAGTaGGAGGAGAAAACCCTTCGGCCTCCGCAGGGCCTGGCACTCACC | + |
|
Preference number: 5 (lower is better) Translates to: GSWDPAASCWPRGWE*EEKTLRPPQGLALT Trigger: GGTGAGTGCCAGGCCCTGCGGAGGCCGAAGGGTTTTCTCCTCTCACTCCCAGCCCCGAGGCCAGCAAGAGGCAGCAGGGTCCCAGCTCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481611.1 |
||
| CDS GCA 90 bp | GCGCCCACGGCAGAGATGGAGCCGGTGACTCGCCCAGGCCCACACTaGGGTGCACAGCTGAACTGGGAGCTGGGACCCTGCTGCCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: APTAEMEPVTRPGPH*GAQLNWELGPCCLL Trigger: CAAGAGGCAGCAGGGTCCCAGCTCCCAGTTCAGCTGTGCACCGCAGTGTGGGCCTGGGCGAGTCACCGGCTCCATCTCTGCCGTGGGCGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481611.1 |
||
| CDS TCA 90 bp | GAAGGGGAGCGGGACTCCCCATCTCCTGAGCTCAGAGGCGGCAGCTaGGCCTGGGAGGGAGGCATTGACCTCTCAGCGCCCACGGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: EGERDSPSPELRGGS*AWEGGIDLSAPTAE Trigger: CTCTGCCGTGGGCGCTGAGAGGTCAATGCCTCCCTCCCAGGCTCAGCTGCCGCCTCTGAGCTCAGGAGATGGGGAGTCCCGCTCCCCTTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481611.1 |
||
| CDS GCA 90 bp | CACGGCAGAGATGGAGCCGGTGACTCGCCCAGGCCCACACTGCGGTaGACAGCTGAACTGGGAGCTGGGACCCTGCTGCCTCTTGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: HGRDGAGDSPRPTLR*TAELGAGTLLPLAG Trigger: GCCAGCAAGAGGCAGCAGGGTCCCAGCTCCCAGTTCAGCTGTGCACCGCAGTGTGGGCCTGGGCGAGTCACCGGCTCCATCTCTGCCGTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481611.1 |
||
| CDS GCA 90 bp | GGCCCACACTGCGGTGCACAGCTGAACTGGGAGCTGGGACCCTGCTaGCTCTTGCTGGCCTCGGGGCTGGGAGTGAGAGGAGAAAACCCT | + |
|
Preference number: 5 (lower is better) Translates to: GPHCGAQLNWELGPC*LLLASGLGVRGENP Trigger: AGGGTTTTCTCCTCTCACTCCCAGCCCCGAGGCCAGCAAGAGGCAGCAGGGTCCCAGCTCCCAGTTCAGCTGTGCACCGCAGTGTGGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481611.1 |
||
| CDS GCA 90 bp | CCAGGCCCACACTGCGGTGCACAGCTGAACTGGGAGCTGGGACCCTaGTGCCTCTTGCTGGCCTCGGGGCTGGGAGTGAGAGGAGAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: PGPHCGAQLNWELGP*CLLLASGLGVRGEN Trigger: GTTTTCTCCTCTCACTCCCAGCCCCGAGGCCAGCAAGAGGCAGCAGGGTCCCAGCTCCCAGTTCAGCTGTGCACCGCAGTGTGGGCCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481611.1 |
||
| CDS TCA 90 bp | CAAAGTGGGGATCACGCTGTTTCTGACCTCACAGGTTTGGTAGAGTaGGCAGGCAGAGCGCCAGCTCTGCGCCTGGCACCCGGGAAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: QSGDHAVSDLTGLVE*AGRAPALRLAPGKC Trigger: GCACTTCCCGGGTGCCAGGCGCAGAGCTGGCGCTCTGCCTGCTCACTCTACCAAACCTGTGAGGTCAGAAACAGCGTGATCCCCACTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481611.1 |
||
| CDS CCA 90 bp | GGACCTAGACTGGCTCCCACATCCCCTTCTCTGAGAAGTTGGCCCTaGCTCTCCTCTCCGCAGAGCTGGAATCCCCAGGTACAACTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GPRLAPTSPSLRSWP*LSSPQSWNPQVQLS Trigger: ACTCAGTTGTACCTGGGGATTCCAGCTCTGCGGAGAGGAGAGCCAGGGCCAACTTCTCAGAGAAGGGGATGTGGGAGCCAGTCTAGGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481611.1 |
||
| CDS TCA 90 bp | CAGGAGTTTAAGAGGGTGAGGCTCGAGGTTCTGAAAGGTTTGGACTaGACGGTGCCAAGCCCCAGCTGCCCACACATTCACCACCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: QEFKRVRLEVLKGLD*TVPSPSCPHIHHPN Trigger: GTTTGGGTGGTGAATGTGTGGGCAGCTGGGGCTTGGCACCGTTCAGTCCAAACCTTTCAGAACCTCGAGCCTCACCCTCTTAAACTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481611.1 |
||
| CDS-3UTR CAA 90 bp | AAACAGATGCATTTAATGGGAAATCTTAAGGCAGGGGTGGCAGGAGCTGCGGGCAAGTGGAAGCCGGTTTaGTCCTGCAGGGACACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KQMHLMGNLKAGVAGAAGKWKPV*SCRDTC Trigger: GCAGGTGTCCCTGCAGGACAAAACCGGCTTCCACTT...GCCCGCAGCTCCTGCCACCCCTGCCTTAAGATTTCCCATTAAATGCATCTGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000303037.13 ENST00000643904.2 ENST00000644725.2 |
||
| CDS-3UTR CAA 90 bp | ATGCATTTAATGGGAAATCTTAAGGCAGGGGTGGCAGGAGCTGCGGGCTCAGTTCTCCAGAGTCACCCGTaGTACTTGGTCTTGCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: MHLMGNLKAGVAGAAGSVLQSHP*YLVLPQ Trigger: CTGGGGCAAGACCAAGTACAACGGGTGACTCTGGAG...AACTGAGCCCGCAGCTCCTGCCACCCCTGCCTTAAGATTTCCCATTAAATGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000567767.5 |
||
| CDS-3UTR CAA 90 bp | AAACAGATGCATTTAATGGGAAATCTTAAGGCAGGGGTGGCAGGAGCTGCGGGCGGGTTCTTGAAGACCTaGGCGATCTTCAGGACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KQMHLMGNLKAGVAGAAGGFLKT*AIFRTW Trigger: CCAGGTCCTGAAGATCGCCAAGGTCTTCAAGAACCC...GCCCGCAGCTCCTGCCACCCCTGCCTTAAGATTTCCCATTAAATGCATCTGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000303037.13 ENST00000562106.5 ENST00000562387.1 ENST00000567767.5 ENST00000643904.2 ENST00000644725.2 |
||
| CDS-3UTR CAA 90 bp | TCTAAACAGATGCATTTAATGGGAAATCTTAAGGCAGGGGTGGCAGGAGCTGCGAAGTGGAAGCCGGTTTaGTCCTGCAGGGACACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SKQMHLMGNLKAGVAGAAKWKPV*SCRDTC Trigger: GCAGGTGTCCCTGCAGGACAAAACCGGCTTCCACTT...CGCAGCTCCTGCCACCCCTGCCTTAAGATTTCCCATTAAATGCATCTGTTTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000303037.13 ENST00000643904.2 ENST00000644725.2 |
||
| CDS-3UTR CAA 90 bp | TCTAAACAGATGCATTTAATGGGAAATCTTAAGGCAGGGGTGGCAGGAGCTGCGGGGGTCTTGTTGGCGTaGTACTTGGTCTTGCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SKQMHLMGNLKAGVAGAAGVLLA*YLVLPQ Trigger: CTGGGGCAAGACCAAGTACAACGCCAACAAGACCCC...CGCAGCTCCTGCCACCCCTGCCTTAAGATTTCCCATTAAATGCATCTGTTTAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000303037.13 ENST00000562106.5 ENST00000643904.2 ENST00000644725.2 |
||
| CDS-3UTR CAA 90 bp | ATGCATTTAATGGGAAATCTTAAGGCAGGGGTGGCAGGAGCTGCGGGCTCAGTTAGCTTGTCAGGGGTCTaGTTGGCGTTGTACTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: MHLMGNLKAGVAGAAGSVSLSGV*LALYLV Trigger: GACCAAGTACAACGCCAACAAGACCCCTGACAAGCT...AACTGAGCCCGCAGCTCCTGCCACCCCTGCCTTAAGATTTCCCATTAAATGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000562387.1 |
||
| CDS-3UTR CAA 90 bp | AAACAGATGCATTTAATGGGAAATCTTAAGGCAGGGGTGGCAGGAGCTGCGGGCAGCTTGTCAGGGGTCTaGTTGGCGTTGTACTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: KQMHLMGNLKAGVAGAAGSLSGV*LALYLV Trigger: GACCAAGTACAACGCCAACAAGACCCCTGACAAGCT...GCCCGCAGCTCCTGCCACCCCTGCCTTAAGATTTCCCATTAAATGCATCTGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000303037.13 ENST00000562106.5 ENST00000562387.1 ENST00000643904.2 ENST00000644725.2 |
||
| CDS-3UTR CAA 90 bp | TCTAAACAGATGCATTTAATGGGAAATCTTAAGGCAGGGGTGGCAGGAGCTGCGGGGTTCTTGAAGACCTaGGCGATCTTCAGGACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SKQMHLMGNLKAGVAGAAGFLKT*AIFRTW Trigger: CCAGGTCCTGAAGATCGCCAAGGTCTTCAAGAACCC...CGCAGCTCCTGCCACCCCTGCCTTAAGATTTCCCATTAAATGCATCTGTTTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000303037.13 ENST00000562106.5 ENST00000567767.5 ENST00000643904.2 ENST00000644725.2 |
||
| CDS-3UTR CAA 90 bp | TCTAAACAGATGCATTTAATGGGAAATCTTAAGGCAGGGGTGGCAGGAGCTGCGAGCTTGTCAGGGGTCTaGTTGGCGTTGTACTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SKQMHLMGNLKAGVAGAASLSGV*LALYLV Trigger: GACCAAGTACAACGCCAACAAGACCCCTGACAAGCT...CGCAGCTCCTGCCACCCCTGCCTTAAGATTTCCCATTAAATGCATCTGTTTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000303037.13 ENST00000562106.5 ENST00000643904.2 ENST00000644725.2 |
||
| CDS TCA 72 bp | GACCCTGCTGCCTCTTGCTGGCCTCGGGGCTGGGAGTaGGAGGAGAAAACCCTTCGGCCTCCGCAGGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: DPAASCWPRGWE*EEKTLRPPQGL Trigger: CAGGCCCTGCGGAGGCCGAAGGGTTTTCTCCTCTCACTCCCAGCCCCGAGGCCAGCAAGAGGCAGCAGGGTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481611.1 |
||
| CDS GCA 72 bp | GATGGAGCCGGTGACTCGCCCAGGCCCACACTGCGGTaGACAGCTGAACTGGGAGCTGGGACCCTGCTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: DGAGDSPRPTLR*TAELGAGTLLP Trigger: AGGCAGCAGGGTCCCAGCTCCCAGTTCAGCTGTGCACCGCAGTGTGGGCCTGGGCGAGTCACCGGCTCCATC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481611.1 |
||
| CDS CCA 72 bp | ACTCGCCCAGGCCCACACTGCGGTGCACAGCTGAACTaGGAGCTGGGACCCTGCTGCCTCTTGCTGGCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: TRPGPHCGAQLN*ELGPCCLLLAS Trigger: CGAGGCCAGCAAGAGGCAGCAGGGTCCCAGCTCCCAGTTCAGCTGTGCACCGCAGTGTGGGCCTGGGCGAGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481611.1 |
||
| CDS GCA 72 bp | TGCGGTGCACAGCTGAACTGGGAGCTGGGACCCTGCTaGCTCTTGCTGGCCTCGGGGCTGGGAGTGAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: CGAQLNWELGPC*LLLASGLGVRG Trigger: TCCTCTCACTCCCAGCCCCGAGGCCAGCAAGAGGCAGCAGGGTCCCAGCTCCCAGTTCAGCTGTGCACCGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481611.1 |
||
| CDS CCA 72 bp | AGTGAGAGGAGAAAACCCTTCGGCCTCCGCAGGGCCTaGCACTCACCGAAGGTGGTACCCAGGAGGGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SERRKPFGLRRA*HSPKVVPRRAQ Trigger: CTGGGCCCTCCTGGGTACCACCTTCGGTGAGTGCCAGGCCCTGCGGAGGCCGAAGGGTTTTCTCCTCTCACT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481611.1 |
||
| CDS TCA 72 bp | CCACACATTCACCACCCAAACCTGTGCTGGGGCCGCTaGCTGTTTGGGGGTTTCCCGAAGGCCTCAGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PHIHHPNLCWGR*LFGGFPKASGQ Trigger: CTGCCCTGAGGCCTTCGGGAAACCCCCAAACAGTCAGCGGCCCCAGCACAGGTTTGGGTGGTGAATGTGTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000481611.1 |
||
| CDS TCA 72 bp | GATCACGCTGTTTCTGACCTCACAGGTTTGGTAGAGTaGGCAGGCAGAGCGCCAGCTCTGCGCCTGGCACCC | + |
|
Preference number: 6 (lower is better) Translates to: DHAVSDLTGLVE*AGRAPALRLAP Trigger: GGGTGCCAGGCGCAGAGCTGGCGCTCTGCCTGCTCACTCTACCAAACCTGTGAGGTCAGAAACAGCGTGATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481611.1 |
||
| CDS CCA 72 bp | CTGGCTCCCACATCCCCTTCTCTGAGAAGTTGGCCCTaGCTCTCCTCTCCGCAGAGCTGGAATCCCCAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: LAPTSPSLRSWP*LSSPQSWNPQV Trigger: TACCTGGGGATTCCAGCTCTGCGGAGAGGAGAGCCAGGGCCAACTTCTCAGAGAAGGGGATGTGGGAGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481611.1 |
||
| CDS CAA 90 bp | ACTGAGTCCAATGAACTGGGCTGTGGGCTGCTGAGGAATGGGGTGTaGGCCCCACCTCAGTTCGGAGAAGTCACACAGGTGGAGCGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: TESNELGCGLLRNGV*APPQFGEVTQVERA Trigger: CGCACGCTCCACCTGTGTGACTTCTCCGAACTGAGGTGGGGCCAACACCCCATTCCTCAGCAGCCCACAGCCCAGTTCATTGGACTCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481611.1 |
||
| CDS TCA 72 bp | GTACAACTGAGTCCAATGAACTGGGCTGTGGGCTGCTaGGGAATGGGGTGTTGGCCCCACCTCAGTTCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: VQLSPMNWAVGC*GMGCWPHLSSE Trigger: CTCCGAACTGAGGTGGGGCCAACACCCCATTCCTCAGCAGCCCACAGCCCAGTTCATTGGACTCAGTTGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481611.1 |
||
| CDS TCA 72 bp | AAGAGGGTGAGGCTCGAGGTTCTGAAAGGTTTGGACTaGACGGTGCCAAGCCCCAGCTGCCCACACATTCAC | + |
|
Preference number: 6 (lower is better) Translates to: KRVRLEVLKGLD*TVPSPSCPHIH Trigger: GTGAATGTGTGGGCAGCTGGGGCTTGGCACCGTTCAGTCCAAACCTTTCAGAACCTCGAGCCTCACCCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481611.1 |
||