RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CTR9 (Homo sapiens)

Ensembl gene IDs: ENSG00000198730

Ensembl transcript IDs: ENST00000361367.7, ENST00000524523.1, ENST00000526874.5, ENST00000529355.1, ENST00000529898.1, ENST00000532365.2

Found 246 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCCAGTGCGTTTCGAGGGGCCGCATCGCTAGGTATGGAACATCAGTaGTGGACAGCTGTGGAACTGTTCTACAAGTCCATGCGTCTCGCA +
Preference number: 1 (lower is better)
Translates to: SSAFRGAASLGMEHQ*WTAVELFYKSMRLA
Trigger: TGCGAGACGCATGGACTTGTAGAACAGTTCCACAGCTGTCCATCACTGATGTTCCATACCTAGCGATGCGGCCCCTCGAAACGCACTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532365.2
3UTR GCA 90 bp CTCCTAAAGTCTGTGAAATTATCCTTGGTCTGCCCAGCTCTCCAGTaGGTTTCGAGGGGCCGCATCGCTAGGTATGGAACATCAGTGATG +
Preference number: 1 (lower is better)
Translates to: LLKSVKLSLVCPALQ*VSRGRIARYGTSVM
Trigger: CATCACTGATGTTCCATACCTAGCGATGCGGCCCCTCGAAACGCACTGGAGAGCTGGGCAGACCAAGGATAATTTCACAGACTTTAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532365.2
3UTR TCA 90 bp GCTGTGGAACTGTTCTACAAGTCCATGCGTCTCGCAAACATGTACTaGGTACATATTTGCCAGGGGCTACTCCAGGGCCAGAGATGTAAC +
Preference number: 1 (lower is better)
Translates to: AVELFYKSMRLANMY*VHICQGLLQGQRCN
Trigger: GTTACATCTCTGGCCCTGGAGTAGCCCCTGGCAAATATGTACTCAGTACATGTTTGCGAGACGCATGGACTTGTAGAACAGTTCCACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532365.2
3UTR GCA 90 bp TGGAACATCAGTGATGGACAGCTGTGGAACTGTTCTACAAGTCCATaGGTCTCGCAAACATGTACTGAGTACATATTTGCCAGGGGCTAC +
Preference number: 1 (lower is better)
Translates to: WNISDGQLWNCSTSP*VSQTCTEYIFARGY
Trigger: GTAGCCCCTGGCAAATATGTACTCAGTACATGTTTGCGAGACGCATGGACTTGTAGAACAGTTCCACAGCTGTCCATCACTGATGTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532365.2
3UTR TCA 90 bp TCTTTTTCTTTCTTTGAATGTCCAGCGTCCTGTGAGCGAAGATTATaGGATATGAGGGCAAGTCTCCTAAAGTCTGTGAAATTATCCTTG +
Preference number: 1 (lower is better)
Translates to: SFSFFECPASCERRL*DMRASLLKSVKLSL
Trigger: CAAGGATAATTTCACAGACTTTAGGAGACTTGCCCTCATATCTCATAATCTTCGCTCACAGGACGCTGGACATTCAAAGAAAGAAAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532365.2
3UTR-3UTR CCA 90 bp GTGAAATTATCCTTGGTCTGCCCAGCTCTCCAGTGCGTTTCGAGGGGCCGCATCAGTGATGGACAGCTGTaGAACTGTTCTACAAGTCCA +
Preference number: 2 (lower is better)
Translates to: VKLSLVCPALQCVSRGRISDGQL*NCSTSP
Trigger: TGGACTTGTAGAACAGTTCCACAGCTGTCCATCACT...GATGCGGCCCCTCGAAACGCACTGGAGAGCTGGGCAGACCAAGGATAATTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532365.2
3UTR-3UTR GCA 90 bp AAAGACGCGTTATTAAGAGGACTTTATGCTGGAGTTCTTGACGTTTTTCTCTCTTGCCCAGCTCTCCAGTaGGTTTCGAGGGGCCGCATC +
Preference number: 2 (lower is better)
Translates to: KDALLRGLYAGVLDVFLSCPALQ*VSRGRI
Trigger: GATGCGGCCCCTCGAAACGCACTGGAGAGCTGGGCA...AGAGAGAAAAACGTCAAGAACTCCAGCATAAAGTCCTCTTAATAACGCGTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532365.2
3UTR CAA 90 bp ATTGTACCACAAAGAATAGTCTCATTTGCACGAGAGACTCAAATATaGGACTCTAGCACAGGAAATGTCTCTTGGGGCTTAGTAATATAC +
Preference number: 2 (lower is better)
Translates to: IVPQRIVSFARETQI*DSSTGNVSWGLVIY
Trigger: GTATATTACTAAGCCCCAAGAGACATTTCCTGTGCTAGAGTCCAATATTTGAGTCTCTCGTGCAAATGAGACTATTCTTTGTGGTACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
3UTR-3UTR CCA 90 bp CCTTTCAAATGTACTTTGGTGCAATTATACAGTAGATATCTCTGCCTTCAGAAAACAGGAAATGTCTCTTaGGGCTTAGTAATATACAAA +
Preference number: 2 (lower is better)
Translates to: PFKCTLVQLYSRYLCLQKTGNVS*GLVIYK
Trigger: TTTGTATATTACTAAGCCCCAAGAGACATTTCCTGT...TTTCTGAAGGCAGAGATATCTACTGTATAATTGCACCAAAGTACATTTGAAAGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
3UTR GCA 72 bp TCTGTGAAATTATCCTTGGTCTGCCCAGCTCTCCAGTaGGTTTCGAGGGGCCGCATCGCTAGGTATGGAACA +
Preference number: 3 (lower is better)
Translates to: SVKLSLVCPALQ*VSRGRIARYGT
Trigger: TGTTCCATACCTAGCGATGCGGCCCCTCGAAACGCACTGGAGAGCTGGGCAGACCAAGGATAATTTCACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532365.2
3UTR TCA 72 bp CTGTTCTACAAGTCCATGCGTCTCGCAAACATGTACTaGGTACATATTTGCCAGGGGCTACTCCAGGGCCAG +
Preference number: 3 (lower is better)
Translates to: LFYKSMRLANMY*VHICQGLLQGQ
Trigger: CTGGCCCTGGAGTAGCCCCTGGCAAATATGTACTCAGTACATGTTTGCGAGACGCATGGACTTGTAGAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532365.2
3UTR TCA 72 bp TTTCGAGGGGCCGCATCGCTAGGTATGGAACATCAGTaGTGGACAGCTGTGGAACTGTTCTACAAGTCCATG +
Preference number: 3 (lower is better)
Translates to: FRGAASLGMEHQ*WTAVELFYKSM
Trigger: CATGGACTTGTAGAACAGTTCCACAGCTGTCCATCACTGATGTTCCATACCTAGCGATGCGGCCCCTCGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532365.2
3UTR TCA 72 bp TTCTTTGAATGTCCAGCGTCCTGTGAGCGAAGATTATaGGATATGAGGGCAAGTCTCCTAAAGTCTGTGAAA +
Preference number: 3 (lower is better)
Translates to: FFECPASCERRL*DMRASLLKSVK
Trigger: TTTCACAGACTTTAGGAGACTTGCCCTCATATCTCATAATCTTCGCTCACAGGACGCTGGACATTCAAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532365.2
3UTR-3UTR CAA 90 bp ATAAAGAAGATGAGACATCTGCCACAGTTTCAGTCAAACCTTTGTAGGAATGATCGAGAGACTCAAATATaGGACTCTAGCACAGGAAAT +
Preference number: 3 (lower is better)
Translates to: IKKMRHLPQFQSNLCRNDRETQI*DSSTGN
Trigger: ATTTCCTGTGCTAGAGTCCAATATTTGAGTCTCTCG...ATCATTCCTACAAAGGTTTGACTGAAACTGTGGCAGATGTCTCATCTTCTTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR GCA 90 bp TGCCAGGGGCTACTCCAGGGCCAGAGATGTAACAGTAATGAGACAGTCTTCTTCTGCCCAGCTCTCCAGTaGGTTTCGAGGGGCCGCATC +
Preference number: 4 (lower is better)
Translates to: CQGLLQGQRCNSNETVFFCPALQ*VSRGRI
Trigger: GATGCGGCCCCTCGAAACGCACTGGAGAGCTGGGCA...GAAGAAGACTGTCTCATTACTGTTACATCTCTGGCCCTGGAGTAGCCCCTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532365.2
CDS-3UTR TCA 90 bp AATTATCCTTGGTCTGCCCAGCTCTCCAGTGCGTTTCGAGGGGCCGCATCGCTAGGTATGGAACATCAGTaGTGGACAGCTGTGGAACTG +
Preference number: 4 (lower is better)
Translates to: NYPWSAQLSSAFRGAASLGMEHQ*WTAVEL
Trigger: CAGTTCCACAGCTGTCCATCACTGATGTTCCATACC...TAGCGATGCGGCCCCTCGAAACGCACTGGAGAGCTGGGCAGACCAAGGATAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532365.2
CDS-3UTR TCA 90 bp AATTATCCTTGGTCTGCCCAGCTCTCCAGTGCGTTTCGAGGGGCCGCATCGCTACTCGCAAACATGTACTaGGTACATATTTGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: NYPWSAQLSSAFRGAASLLANMY*VHICQG
Trigger: CCCCTGGCAAATATGTACTCAGTACATGTTTGCGAG...TAGCGATGCGGCCCCTCGAAACGCACTGGAGAGCTGGGCAGACCAAGGATAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532365.2
CDS-3UTR CCA 90 bp GAAATTATCCTTGGTCTGCCCAGCTCTCCAGTGCGTTTCGAGGGGCCGCATCGCAGTGATGGACAGCTGTaGAACTGTTCTACAAGTCCA +
Preference number: 4 (lower is better)
Translates to: EIILGLPSSPVRFEGPHRSDGQL*NCSTSP
Trigger: TGGACTTGTAGAACAGTTCCACAGCTGTCCATCACT...GCGATGCGGCCCCTCGAAACGCACTGGAGAGCTGGGCAGACCAAGGATAATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532365.2
CDS-3UTR TCA 90 bp TCTACATCGCTGCAGTATTACACTATTGAAAACCTTCCTTTCAAATGTACTTTGCTCCGGCTCTGGTCTTaGCTGCCGCCCCGCGGCGCC +
Preference number: 4 (lower is better)
Translates to: STSLQYYTIENLPFKCTLLRLWS*LPPRGA
Trigger: GGCGCCGCGGGGCGGCAGTCAAGACCAGAGCCGGAG...CAAAGTACATTTGAAAGGAAGGTTTTCAATAGTGTAATACTGCAGCGATGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR GCA 90 bp ATAAAGAAGATGAGACATCTGCCACAGTTTCAGTCAAACCTTTGTAGGAATGATGGCTCTGGTCTTGACTaGCGCCCCGCGGCGCCGCTG +
Preference number: 4 (lower is better)
Translates to: IKKMRHLPQFQSNLCRNDGSGLD*RPAAPL
Trigger: CAGCGGCGCCGCGGGGCGGCAGTCAAGACCAGAGCC...ATCATTCCTACAAAGGTTTGACTGAAACTGTGGCAGATGTCTCATCTTCTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CCA 90 bp AGGGGCTACTCCAGGGCCAGAGATGTAACAGTAATGAGACAGTCTTCTTCTGGATCCTGGAAAACACTCTaGGGAACCCACTGGATCGAG +
Preference number: 4 (lower is better)
Translates to: RGYSRARDVTVMRQSSSGSWKTL*GTHWIE
Trigger: CTCGATCCAGTGGGTTCCCCAGAGTGTTTTCCAGGA...TCCAGAAGAAGACTGTCTCATTACTGTTACATCTCTGGCCCTGGAGTAGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532365.2
CDS-3UTR GCA 90 bp CCTTTCAAATGTACTTTGGTGCAATTATACAGTAGATATCTCTGCCTTCAGAAAGTGGCCTCCGGGGACTaGCGGCCTCGCTGCCAGACT +
Preference number: 4 (lower is better)
Translates to: PFKCTLVQLYSRYLCLQKVASGD*RPRCQT
Trigger: AGTCTGGCAGCGAGGCCGGCAGTCCCCGGAGGCCAC...TTTCTGAAGGCAGAGATATCTACTGTATAATTGCACCAAAGTACATTTGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CCA 90 bp CCTTTCAAATGTACTTTGGTGCAATTATACAGTAGATATCTCTGCCTTCAGAAAGCCCCGCGGCGCCGCTaGAGCTCTGGCTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PFKCTLVQLYSRYLCLQKAPRRR*SSGFSF
Trigger: GAAGGAGAAGCCAGAGCTCCAGCGGCGCCGCGGGGC...TTTCTGAAGGCAGAGATATCTACTGTATAATTGCACCAAAGTACATTTGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR TCA 90 bp AGGGGCTACTCCAGGGCCAGAGATGTAACAGTAATGAGACAGTCTTCTTCTGGATGTGAGCGAAGATTATaGGATATGAGGGCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: RGYSRARDVTVMRQSSSGCERRL*DMRASL
Trigger: GAGACTTGCCCTCATATCTCATAATCTTCGCTCACA...TCCAGAAGAAGACTGTCTCATTACTGTTACATCTCTGGCCCTGGAGTAGCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532365.2
CDS-3UTR TCA 90 bp CCTAAAGTCTGTGAAATTATCCTTGGTCTGCCCAGCTCTCCAGTGCGTTTCGAGATGTCCAGCGTCCTGTaGGCGAAGATTATGAGATAT +
Preference number: 4 (lower is better)
Translates to: PKVCEIILGLPSSPVRFEMSSVL*AKIMRY
Trigger: ATATCTCATAATCTTCGCTCACAGGACGCTGGACAT...CTCGAAACGCACTGGAGAGCTGGGCAGACCAAGGATAATTTCACAGACTTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532365.2
CDS-3UTR GCA 90 bp CCACAAAGAATAGTCTCATTTGCACGAGAGACTCAAATATTGGACTCTAGCACATCCTTTTCTTGCTCTTaGTTGGCCCGCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: PQRIVSFARETQILDSSTSFSCS*LARSSR
Trigger: GCGGGAGCTGCGGGCCAAGCAAGAGCAAGAAAAGGA...TGTGCTAGAGTCCAATATTTGAGTCTCTCGTGCAAATGAGACTATTCTTTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CCA 90 bp TCTACATCGCTGCAGTATTACACTATTGAAAACCTTCCTTTCAAATGTACTTTGGCGCCGCTGGAGCTCTaGCTTCTCCTTCCCGTCAGC +
Preference number: 4 (lower is better)
Translates to: STSLQYYTIENLPFKCTLAPLEL*LLLPVS
Trigger: GCTGACGGGAAGGAGAAGCCAGAGCTCCAGCGGCGC...CAAAGTACATTTGAAAGGAAGGTTTTCAATAGTGTAATACTGCAGCGATGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CCA 90 bp TCTACATCGCTGCAGTATTACACTATTGAAAACCTTCCTTTCAAATGTACTTTGCGTGCCCGGGCCACATaGTACTGGGCCTGGCTCAGT +
Preference number: 4 (lower is better)
Translates to: STSLQYYTIENLPFKCTLRARAT*YWAWLS
Trigger: ACTGAGCCAGGCCCAGTACCATGTGGCCCGGGCACG...CAAAGTACATTTGAAAGGAAGGTTTTCAATAGTGTAATACTGCAGCGATGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR GCA 90 bp AGGGGCTACTCCAGGGCCAGAGATGTAACAGTAATGAGACAGTCTTCTTCTGGATGTTCTACAAGTCCATaGGTCTCGCAAACATGTACT +
Preference number: 4 (lower is better)
Translates to: RGYSRARDVTVMRQSSSGCSTSP*VSQTCT
Trigger: AGTACATGTTTGCGAGACGCATGGACTTGTAGAACA...TCCAGAAGAAGACTGTCTCATTACTGTTACATCTCTGGCCCTGGAGTAGCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532365.2
CDS-3UTR TCA 90 bp TTTTCACATATGATAGGTGGAATTGTACCACAAAGAATAGTCTCATTTGCACGAAGGCTAATCCAGAGGTaGGTGACGGCTCCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: FSHMIGGIVPQRIVSFARRLIQR*VTAPAL
Trigger: CAGAGCCGGAGCCGTCACTCACCTCTGGATTAGCCT...TCGTGCAAATGAGACTATTCTTTGTGGTACAATTCCACCTATCATATGTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR GCA 90 bp CCACAAAGAATAGTCTCATTTGCACGAGAGACTCAAATATTGGACTCTAGCACATTCATCTTGTTTGCGTaGCCGGGCCACATGGTACTG +
Preference number: 4 (lower is better)
Translates to: PQRIVSFARETQILDSSTFILFA*PGHMVL
Trigger: CAGTACCATGTGGCCCGGGCACGCAAACAAGATGAA...TGTGCTAGAGTCCAATATTTGAGTCTCTCGTGCAAATGAGACTATTCTTTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR GCA 90 bp ATAAAGAAGATGAGACATCTGCCACAGTTTCAGTCAAACCTTTGTAGGAATGATGACTGCCGGCCTCGCTaGCAGACTTGTTCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: IKKMRHLPQFQSNLCRNDDCRPR*QTCSGS
Trigger: AGAACCAGAACAAGTCTGGCAGCGAGGCCGGCAGTC...ATCATTCCTACAAAGGTTTGACTGAAACTGTGGCAGATGTCTCATCTTCTTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CCA 90 bp ATAAAGAAGATGAGACATCTGCCACAGTTTCAGTCAAACCTTTGTAGGAATGATCGGGCCACATGGTACTaGGCCTGGCTCAGTAAGTCA +
Preference number: 4 (lower is better)
Translates to: IKKMRHLPQFQSNLCRNDRATWY*AWLSKS
Trigger: TGACTTACTGAGCCAGGCCCAGTACCATGTGGCCCG...ATCATTCCTACAAAGGTTTGACTGAAACTGTGGCAGATGTCTCATCTTCTTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR TCA 90 bp CCACAAAGAATAGTCTCATTTGCACGAGAGACTCAAATATTGGACTCTAGCACACGGGATACTGTTCTGTaGCCTTCTTCAAATGGCCCT +
Preference number: 4 (lower is better)
Translates to: PQRIVSFARETQILDSSTRDTVL*PSSNGP
Trigger: AGGGCCATTTGAAGAAGGTCACAGAACAGTATCCCG...TGTGCTAGAGTCCAATATTTGAGTCTCTCGTGCAAATGAGACTATTCTTTGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR TCA 90 bp CCACAAAGAATAGTCTCATTTGCACGAGAGACTCAAATATTGGACTCTAGCACATGCTGTTCCATAGGCTaGAAGGGCACCCTGTATATC +
Preference number: 4 (lower is better)
Translates to: PQRIVSFARETQILDSSTCCSIG*KGTLYI
Trigger: GATATACAGGGTGCCCTTTCAGCCTATGGAACAGCA...TGTGCTAGAGTCCAATATTTGAGTCTCTCGTGCAAATGAGACTATTCTTTGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR TCA 90 bp CCACAAAGAATAGTCTCATTTGCACGAGAGACTCAAATATTGGACTCTAGCACAACATCTGAACGGCGCTaGTGTACTGCTTTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PQRIVSFARETQILDSSTTSERR*CTAFAP
Trigger: TGGAGCAAAAGCAGTACATCAGCGCCGTTCAGATGT...TGTGCTAGAGTCCAATATTTGAGTCTCTCGTGCAAATGAGACTATTCTTTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR TCA 90 bp ATAAAGAAGATGAGACATCTGCCACAGTTTCAGTCAAACCTTTGTAGGAATGATGTAACTTGCCACACTTaGAGAGGGCCCGGGCCAAAT +
Preference number: 4 (lower is better)
Translates to: IKKMRHLPQFQSNLCRNDVTCHT*RGPGPN
Trigger: ATTTGGCCCGGGCCCTCTTCAAGTGTGGCAAGTTAC...ATCATTCCTACAAAGGTTTGACTGAAACTGTGGCAGATGTCTCATCTTCTTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CCA 90 bp CCACAAAGAATAGTCTCATTTGCACGAGAGACTCAAATATTGGACTCTAGCACATGGAGGCAGACGTTCTaGCTTGGGAGCCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: PQRIVSFARETQILDSSTWRQTF*LGSLFL
Trigger: AAGAAAAAGGCTCCCAAGCCAGAACGTCTGCCTCCA...TGTGCTAGAGTCCAATATTTGAGTCTCTCGTGCAAATGAGACTATTCTTTGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CCA 90 bp ATTGTACCACAAAGAATAGTCTCATTTGCACGAGAGACTCAAATATTGGACTCTGGCACTTGGAGAAGCTaGGCGAGAGTCGTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: IVPQRIVSFARETQILDSGTWRS*ARVVLR
Trigger: TCTGAGAACGACTCTCGCCCAGCTTCTCCAAGTGCC...AGAGTCCAATATTTGAGTCTCTCGTGCAAATGAGACTATTCTTTGTGGTACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR TCA 90 bp CCTTTCAAATGTACTTTGGTGCAATTATACAGTAGATATCTCTGCCTTCAGAAACGATCTCGGGTGGGCTaGTGTAAAGTTTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: PFKCTLVQLYSRYLCLQKRSRVG*CKVWSH
Trigger: GTGGCTCCAAACTTTACATCAGCCCACCCGAGATCG...TTTCTGAAGGCAGAGATATCTACTGTATAATTGCACCAAAGTACATTTGAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR TCA 90 bp ATAAAGAAGATGAGACATCTGCCACAGTTTCAGTCAAACCTTTGTAGGAATGATCTCCGATTCGTGATCTaGTTCGGCACTTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: IKKMRHLPQFQSNLCRNDLRFVI*FGTWRS
Trigger: GCTTCTCCAAGTGCCGAATCAGATCACGAATCGGAG...ATCATTCCTACAAAGGTTTGACTGAAACTGTGGCAGATGTCTCATCTTCTTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CCA 90 bp CCTTTCAAATGTACTTTGGTGCAATTATACAGTAGATATCTCTGCCTTCAGAAATTTCTTGCTCTTGCTTaGCCCGCAGCTCCCGCTCTT +
Preference number: 4 (lower is better)
Translates to: PFKCTLVQLYSRYLCLQKFLALA*PAAPAL
Trigger: AAGAGCGGGAGCTGCGGGCCAAGCAAGAGCAAGAAA...TTTCTGAAGGCAGAGATATCTACTGTATAATTGCACCAAAGTACATTTGAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR TCA 90 bp CCACAAAGAATAGTCTCATTTGCACGAGAGACTCAAATATTGGACTCTAGCACAAACTGTGCATCAGCTTaGTCCATTTTGTCACCCTCA +
Preference number: 4 (lower is better)
Translates to: PQRIVSFARETQILDSSTNCASA*SILSPS
Trigger: TGAGGGTGACAAAATGGATCAAGCTGATGCACAGTT...TGTGCTAGAGTCCAATATTTGAGTCTCTCGTGCAAATGAGACTATTCTTTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR TCA 90 bp TCTACATCGCTGCAGTATTACACTATTGAAAACCTTCCTTTCAAATGTACTTTGGTTCCAGGGCTCTGCTaGATGCCAGACGAGCTTTTT +
Preference number: 4 (lower is better)
Translates to: STSLQYYTIENLPFKCTLVPGLC*MPDELF
Trigger: AAAAAGCTCGTCTGGCATTCAGCAGAGCCCTGGAAC...CAAAGTACATTTGAAAGGAAGGTTTTCAATAGTGTAATACTGCAGCGATGTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR TCA 90 bp ATAAAGAAGATGAGACATCTGCCACAGTTTCAGTCAAACCTTTGTAGGAATGATGAGCACAAAAGAGGATaGGGCAAACTGTGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: IKKMRHLPQFQSNLCRNDEHKRG*GKLCGL
Trigger: CAAGCCACACAGTTTGCCTCATCCTCTTTTGTGCTC...ATCATTCCTACAAAGGTTTGACTGAAACTGTGGCAGATGTCTCATCTTCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR TCA 90 bp ATAAAGAAGATGAGACATCTGCCACAGTTTCAGTCAAACCTTTGTAGGAATGATGCCTGCACTTTCTCCTaGAGGATTCGTGTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: IKKMRHLPQFQSNLCRNDACTFS*RIRVAV
Trigger: AACAGCAACACGAATCCTTCAGGAGAAAGTGCAGGC...ATCATTCCTACAAAGGTTTGACTGAAACTGTGGCAGATGTCTCATCTTCTTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR TCA 90 bp GCAGTTTTCACATATGATAGGTGGAATTGTACCACAAAGAATAGTCTCATTTGCTTGTTCGTCCTCGTCTaGGTCACTGTTGCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: AVFTYDRWNCTTKNSLICLFVLV*VTVAVA
Trigger: AGCAACAGCAACAGTGACTCAGACGAGGACGAACAA...GCAAATGAGACTATTCTTTGTGGTACAATTCCACCTATCATATGTGAAAACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR TCA 90 bp CCTTTCAAATGTACTTTGGTGCAATTATACAGTAGATATCTCTGCCTTCAGAAATCACTGTCTGAGTCCTaGTCTGACCGCTGTCTTCGT +
Preference number: 4 (lower is better)
Translates to: PFKCTLVQLYSRYLCLQKSLSES*SDRCLR
Trigger: ACGAAGACAGCGGTCAGATCAGGACTCAGACAGTGA...TTTCTGAAGGCAGAGATATCTACTGTATAATTGCACCAAAGTACATTTGAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR TCA 90 bp TTTTCACATATGATAGGTGGAATTGTACCACAAAGAATAGTCTCATTTGCACGACCTCTCTCCGATTCGTaGTCTGATTCGGCACTTGGA +
Preference number: 4 (lower is better)
Translates to: FSHMIGGIVPQRIVSFARPLSDS*SDSALG
Trigger: TCCAAGTGCCGAATCAGATCACGAATCGGAGAGAGG...TCGTGCAAATGAGACTATTCTTTGTGGTACAATTCCACCTATCATATGTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR GCA 90 bp GACATCAATACCAAGTTTGTGCACCACTTGGTAAAAGATTGCAATAAAAATCAGCAGGGCTCTGCTGAATaGCAGACGAGCTTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: DINTKFVHHLVKDCNKNQQGSAE*QTSFFQ
Trigger: CTGGAAAAAGCTCGTCTGGCATTCAGCAGAGCCCTG...CTGATTTTTATTGCAATCTTTTACCAAGTGGTGCACAAACTTGGTATTGATGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR GCA 90 bp TTTTCACATATGATAGGTGGAATTGTACCACAAAGAATAGTCTCATTTGCACGACTTCTTCATCTTGTTTaGGTGCCCGGGCCACATGGT +
Preference number: 4 (lower is better)
Translates to: FSHMIGGIVPQRIVSFARLLHLV*VPGPHG
Trigger: ACCATGTGGCCCGGGCACGCAAACAAGATGAAGAAG...TCGTGCAAATGAGACTATTCTTTGTGGTACAATTCCACCTATCATATGTGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR GCA 90 bp GCAGTTTTCACATATGATAGGTGGAATTGTACCACAAAGAATAGTCTCATTTGCGATTCATTGTCAGACTaGTCAGAACCGGAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: AVFTYDRWNCTTKNSLICDSLSD*SEPEGL
Trigger: AAGGCCCTCCGGTTCTGAGCAGTCTGACAATGAATC...GCAAATGAGACTATTCTTTGTGGTACAATTCCACCTATCATATGTGAAAACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR GCA 90 bp ACAGTAATGAGACAGTCTTCTTCTGGAAGCAACGTTTTGACTATCGAACTCTTTAAATTATCCTTGGTCTaGCCAGCTCTCCAGTGCGTT +
Preference number: 4 (lower is better)
Translates to: TVMRQSSSGSNVLTIELFKLSLV*PALQCV
Trigger: AACGCACTGGAGAGCTGGGCAGACCAAGGATAATTT...AAAGAGTTCGATAGTCAAAACGTTGCTTCCAGAAGAAGACTGTCTCATTACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532365.2
CDS-3UTR CCA 90 bp CCACAAAGAATAGTCTCATTTGCACGAGAGACTCAAATATTGGACTCTAGCACATCCACTTCTGTATTATaGAATGCATGGAGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: PQRIVSFARETQILDSSTSTSVL*NAWRAR
Trigger: TCTGGCCCTCCATGCATTCCATAATACAGAAGTGGA...TGTGCTAGAGTCCAATATTTGAGTCTCTCGTGCAAATGAGACTATTCTTTGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CCA 90 bp CCACAAAGAATAGTCTCATTTGCACGAGAGACTCAAATATTGGACTCTAGCACATTTCTCGATCTCGGGTaGGCTGATGTAAAGTTTGGA +
Preference number: 4 (lower is better)
Translates to: PQRIVSFARETQILDSSTFLDLG*ADVKFG
Trigger: TCCAAACTTTACATCAGCCCACCCGAGATCGAGAAA...TGTGCTAGAGTCCAATATTTGAGTCTCTCGTGCAAATGAGACTATTCTTTGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CCA 90 bp ATAAAGAAGATGAGACATCTGCCACAGTTTCAGTCAAACCTTTGTAGGAATGATGTCTTCTCCACATACTaGGCCCGCTGTTCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: IKKMRHLPQFQSNLCRNDVFSTY*ARCSKS
Trigger: ACTTTTGGAACAGCGGGCCCAGTATGTGGAGAAGAC...ATCATTCCTACAAAGGTTTGACTGAAACTGTGGCAGATGTCTCATCTTCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CCA 90 bp GCAGTTTTCACATATGATAGGTGGAATTGTACCACAAAGAATAGTCTCATTTGCTCAGAAACTCCTGAGTaGCTTCTCCCTGACTGCACA +
Preference number: 4 (lower is better)
Translates to: AVFTYDRWNCTTKNSLICSETPE*LLPDCT
Trigger: TGTGCAGTCAGGGAGAAGCCACTCAGGAGTTTCTGA...GCAAATGAGACTATTCTTTGTGGTACAATTCCACCTATCATATGTGAAAACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
3UTR CAA 72 bp CAAAGAATAGTCTCATTTGCACGAGAGACTCAAATATaGGACTCTAGCACAGGAAATGTCTCTTGGGGCTTA +
Preference number: 4 (lower is better)
Translates to: QRIVSFARETQI*DSSTGNVSWGL
Trigger: TAAGCCCCAAGAGACATTTCCTGTGCTAGAGTCCAATATTTGAGTCTCTCGTGCAAATGAGACTATTCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR TCA 90 bp ATAAAGAAGATGAGACATCTGCCACAGTTTCAGTCAAACCTTTGTAGGAATGATTCTCCCTCCGGTAACTaGTCGAAGTCAAGTTCAATG +
Preference number: 4 (lower is better)
Translates to: IKKMRHLPQFQSNLCRNDSPSGN*SKSSSM
Trigger: CATTGAACTTGACTTCGATCAGTTACCGGAGGGAGA...ATCATTCCTACAAAGGTTTGACTGAAACTGTGGCAGATGTCTCATCTTCTTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR TCA 90 bp GCAGTTTTCACATATGATAGGTGGAATTGTACCACAAAGAATAGTCTCATTTGCGGGCACCCACATTATTaGGAATCTCTGGAGGAACAT +
Preference number: 4 (lower is better)
Translates to: AVFTYDRWNCTTKNSLICGHPHY*ESLEEH
Trigger: ATGTTCCTCCAGAGATTCTCAATAATGTGGGTGCCC...GCAAATGAGACTATTCTTTGTGGTACAATTCCACCTATCATATGTGAAAACTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR TCA 90 bp TTTTCACATATGATAGGTGGAATTGTACCACAAAGAATAGTCTCATTTGCACGACCTGGCGAGATTATATaGCGTGGTAACGGAAATGGC +
Preference number: 4 (lower is better)
Translates to: FSHMIGGIVPQRIVSFARPGEII*RGNGNG
Trigger: GCCATTTCCGTTACCACGTCATATAATCTCGCCAGG...TCGTGCAAATGAGACTATTCTTTGTGGTACAATTCCACCTATCATATGTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR TCA 90 bp ACAGTAATGAGACAGTCTTCTTCTGGAAGCAACGTTTTGACTATCGAACTCTTTTATTTTTCCCTTCATTaGTGGAGGCAGACGTTCTGG +
Preference number: 4 (lower is better)
Translates to: TVMRQSSSGSNVLTIELFYFSLH*WRQTFW
Trigger: CCAGAACGTCTGCCTCCATCAATGAAGGGAAAAATA...AAAGAGTTCGATAGTCAAAACGTTGCTTCCAGAAGAAGACTGTCTCATTACTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532365.2
CDS-3UTR GCA 90 bp ATTGTACCACAAAGAATAGTCTCATTTGCACGAGAGACTCAAATATTGGACTCTAGCCAGTCCAACCAATaGTCCCACGCATTTGGAATT +
Preference number: 4 (lower is better)
Translates to: IVPQRIVSFARETQILDSSQSNQ*SHAFGI
Trigger: AATTCCAAATGCGTGGGAGCATTGGTTGGACTGGCT...AGAGTCCAATATTTGAGTCTCTCGTGCAAATGAGACTATTCTTTGTGGTACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR GCA 90 bp ATAAAGAAGATGAGACATCTGCCACAGTTTCAGTCAAACCTTTGTAGGAATGATCTCTCAAACTTCTTCTaGCCAGGACCCCATTCTTGT +
Preference number: 4 (lower is better)
Translates to: IKKMRHLPQFQSNLCRNDLSNFF*PGPHSC
Trigger: ACAAGAATGGGGTCCTGGGCAGAAGAAGTTTGAGAG...ATCATTCCTACAAAGGTTTGACTGAAACTGTGGCAGATGTCTCATCTTCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR GCA 90 bp GCAGTTTTCACATATGATAGGTGGAATTGTACCACAAAGAATAGTCTCATTTGCAGTCACTGTTGCTGTTaGTGTTCCTGGGATGTCCTT +
Preference number: 4 (lower is better)
Translates to: AVFTYDRWNCTTKNSLICSHCCC*CSWDVL
Trigger: AAGGACATCCCAGGAACAGCAACAGCAACAGTGACT...GCAAATGAGACTATTCTTTGTGGTACAATTCCACCTATCATATGTGAAAACTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR GCA 90 bp GACATCAATACCAAGTTTGTGCACCACTTGGTAAAAGATTGCAATAAAAATCAGCGTCTGAGTCACTGTTaGTGTTGCTGTTCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: DINTKFVHHLVKDCNKNQRLSHC*CCCSWD
Trigger: ATCCCAGGAACAGCAACAGCAACAGTGACTCAGACG...CTGATTTTTATTGCAATCTTTTACCAAGTGGTGCACAAACTTGGTATTGATGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR GCA 90 bp ATAAAGAAGATGAGACATCTGCCACAGTTTCAGTCAAACCTTTGTAGGAATGATTGGCTTCTCCCTGACTaGACAGATTCATTGTCAGAC +
Preference number: 4 (lower is better)
Translates to: IKKMRHLPQFQSNLCRNDWLLPD*TDSLSD
Trigger: GTCTGACAATGAATCTGTGCAGTCAGGGAGAAGCCA...ATCATTCCTACAAAGGTTTGACTGAAACTGTGGCAGATGTCTCATCTTCTTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CCA 90 bp ATAAAGAAGATGAGACATCTGCCACAGTTTCAGTCAAACCTTTGTAGGAATGATTTCCGCTGGACATCCTaGGTTAGTACGCAATGCTTT +
Preference number: 4 (lower is better)
Translates to: IKKMRHLPQFQSNLCRNDFRWTS*VSTQCF
Trigger: AAAGCATTGCGTACTAACCCAGGATGTCCAGCGGAA...ATCATTCCTACAAAGGTTTGACTGAAACTGTGGCAGATGTCTCATCTTCTTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CCA 90 bp ATTGTACCACAAAGAATAGTCTCATTTGCACGAGAGACTCAAATATTGGACTCTTCGCCTCATATAGCCTaGCGAGATTATATGACGTGG +
Preference number: 4 (lower is better)
Translates to: IVPQRIVSFARETQILDSSPHIA*RDYMTW
Trigger: CCACGTCATATAATCTCGCCAGGCTATATGAGGCGA...AGAGTCCAATATTTGAGTCTCTCGTGCAAATGAGACTATTCTTTGTGGTACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CCA 90 bp CCACAAAGAATAGTCTCATTTGCACGAGAGACTCAAATATTGGACTCTAGCACAGTTGCTTCTCTTACTTaGGCAAATACATCACGAGCT +
Preference number: 4 (lower is better)
Translates to: PQRIVSFARETQILDSSTVASLT*ANTSRA
Trigger: AGCTCGTGATGTATTTGCCCAAGTAAGAGAAGCAAC...TGTGCTAGAGTCCAATATTTGAGTCTCTCGTGCAAATGAGACTATTCTTTGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CCA 90 bp CCTTTCAAATGTACTTTGGTGCAATTATACAGTAGATATCTCTGCCTTCAGAAAACATGGTACTGGGCCTaGCTCAGTAAGTCAGAACAC +
Preference number: 4 (lower is better)
Translates to: PFKCTLVQLYSRYLCLQKTWYWA*LSKSEH
Trigger: GTGTTCTGACTTACTGAGCCAGGCCCAGTACCATGT...TTTCTGAAGGCAGAGATATCTACTGTATAATTGCACCAAAGTACATTTGAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CCA 90 bp TTTTCACATATGATAGGTGGAATTGTACCACAAAGAATAGTCTCATTTGCACGAGCAGACGTTCTGGCTTaGGAGCCTTTTTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: FSHMIGGIVPQRIVSFARADVLA*EPFSSL
Trigger: CAGAGAAGAAAAAGGCTCCCAAGCCAGAACGTCTGC...TCGTGCAAATGAGACTATTCTTTGTGGTACAATTCCACCTATCATATGTGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CCA 90 bp ATTGTACCACAAAGAATAGTCTCATTTGCACGAGAGACTCAAATATTGGACTCTTGCTGTTGCTGTTCCTaGGATGTCCTTCATCAGCAA +
Preference number: 4 (lower is better)
Translates to: IVPQRIVSFARETQILDSCCCCS*DVLHQQ
Trigger: TTGCTGATGAAGGACATCCCAGGAACAGCAACAGCA...AGAGTCCAATATTTGAGTCTCTCGTGCAAATGAGACTATTCTTTGTGGTACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CCA 90 bp CCTTTCAAATGTACTTTGGTGCAATTATACAGTAGATATCTCTGCCTTCAGAAACTGAGGCCTCATTGTTaGATCCCTCTGGTTCCGATT +
Preference number: 4 (lower is better)
Translates to: PFKCTLVQLYSRYLCLQKLRPHC*IPLVPI
Trigger: AATCGGAACCAGAGGGATCCAACAATGAGGCCTCAG...TTTCTGAAGGCAGAGATATCTACTGTATAATTGCACCAAAGTACATTTGAAAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR TCA 90 bp CCTTTCAAATGTACTTTGGTGCAATTATACAGTAGATATCTCTGCCTTCAGAAACAGTTTTCATACATCTaGACGGCGCTGATGTACTGC +
Preference number: 4 (lower is better)
Translates to: PFKCTLVQLYSRYLCLQKQFSYI*TALMYC
Trigger: GCAGTACATCAGCGCCGTTCAGATGTATGAAAACTG...TTTCTGAAGGCAGAGATATCTACTGTATAATTGCACCAAAGTACATTTGAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR GCA 90 bp ATAAAGAAGATGAGACATCTGCCACAGTTTCAGTCAAACCTTTGTAGGAATGATCCAAAACAGCTCCTATaGCATTGGCAGCATACAGAT +
Preference number: 4 (lower is better)
Translates to: IKKMRHLPQFQSNLCRNDPKQLL*HWQHTD
Trigger: ATCTGTATGCTGCCAATGGCATAGGAGCTGTTTTGG...ATCATTCCTACAAAGGTTTGACTGAAACTGTGGCAGATGTCTCATCTTCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR GCA 90 bp TCTACATCGCTGCAGTATTACACTATTGAAAACCTTCCTTTCAAATGTACTTTGAACTGTATCACTGGGTaGCACATGTCTAGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: STSLQYYTIENLPFKCTLNCITG*HMSSLQ
Trigger: CTGAAGGCTAGACATGTGGCACCCAGTGATACAGTT...CAAAGTACATTTGAAAGGAAGGTTTTCAATAGTGTAATACTGCAGCGATGTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR GCA 90 bp GCAGTTTTCACATATGATAGGTGGAATTGTACCACAAAGAATAGTCTCATTTGCGAGGTAGCTAATCTTTaGAGGACCAAGGCCACATTA +
Preference number: 4 (lower is better)
Translates to: AVFTYDRWNCTTKNSLICEVANL*RTKATL
Trigger: TAATGTGGCCTTGGTCCTGCAAAGATTAGCTACCTC...GCAAATGAGACTATTCTTTGTGGTACAATTCCACCTATCATATGTGAAAACTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR GCA 90 bp GACATCAATACCAAGTTTGTGCACCACTTGGTAAAAGATTGCAATAAAAATCAGAGTAAGTCAGAACACTaGCTGGCTTCTGTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: DINTKFVHHLVKDCNKNQSKSEH*LASVAA
Trigger: TGCTGCTACAGAAGCCAGGCAGTGTTCTGACTTACT...CTGATTTTTATTGCAATCTTTTACCAAGTGGTGCACAAACTTGGTATTGATGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CCA 90 bp GCAGTTTTCACATATGATAGGTGGAATTGTACCACAAAGAATAGTCTCATTTGCATTATTGAGAATCTCTaGAGGAACATCGGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: AVFTYDRWNCTTKNSLICIIENL*RNIGLH
Trigger: GTGCAGGCCGATGTTCCTCCAGAGATTCTCAATAAT...GCAAATGAGACTATTCTTTGTGGTACAATTCCACCTATCATATGTGAAAACTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CCA 90 bp GACATCAATACCAAGTTTGTGCACCACTTGGTAAAAGATTGCAATAAAAATCAGCTGCCAGACTTGTTCTaGTTCTCATCGGAATCACTC +
Preference number: 4 (lower is better)
Translates to: DINTKFVHHLVKDCNKNQLPDLF*FSSESL
Trigger: GAGTGATTCCGATGAGAACCAGAACAAGTCTGGCAG...CTGATTTTTATTGCAATCTTTTACCAAGTGGTGCACAAACTTGGTATTGATGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CCA 90 bp ATAAAGAAGATGAGACATCTGCCACAGTTTCAGTCAAACCTTTGTAGGAATGATTCATTTCCAGAGCCTTaGCCAGAACCCTCATTATCA +
Preference number: 4 (lower is better)
Translates to: IKKMRHLPQFQSNLCRNDSFPEP*PEPSLS
Trigger: TGATAATGAGGGTTCTGGCCAAGGCTCTGGAAATGA...ATCATTCCTACAAAGGTTTGACTGAAACTGTGGCAGATGTCTCATCTTCTTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR TCA 90 bp TTTTCACATATGATAGGTGGAATTGTACCACAAAGAATAGTCTCATTTGCACGACAGCCTCTTTATTGTTaGGTTCTAGAACAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: FSHMIGGIVPQRIVSFARQPLYC*VLEQPV
Trigger: GACTGGCTGTTCTAGAACTCAACAATAAAGAGGCTG...TCGTGCAAATGAGACTATTCTTTGTGGTACAATTCCACCTATCATATGTGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR TCA 90 bp GACATCAATACCAAGTTTGTGCACCACTTGGTAAAAGATTGCAATAAAAATCAGTTTTTCTTGATCTTCTaGGGCAGCATAGAGAGAGCC +
Preference number: 4 (lower is better)
Translates to: DINTKFVHHLVKDCNKNQFFLIF*GSIERA
Trigger: GGCTCTCTCTATGCTGCCTCAGAAGATCAAGAAAAA...CTGATTTTTATTGCAATCTTTTACCAAGTGGTGCACAAACTTGGTATTGATGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR TCA 90 bp CCTTTCAAATGTACTTTGGTGCAATTATACAGTAGATATCTCTGCCTTCAGAAATATTTTTCCCTTCATTaGTGGAGGCAGACGTTCTGG +
Preference number: 4 (lower is better)
Translates to: PFKCTLVQLYSRYLCLQKYFSLH*WRQTFW
Trigger: CCAGAACGTCTGCCTCCATCAATGAAGGGAAAAATA...TTTCTGAAGGCAGAGATATCTACTGTATAATTGCACCAAAGTACATTTGAAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR GCA 90 bp CCTTTCAAATGTACTTTGGTGCAATTATACAGTAGATATCTCTGCCTTCAGAAATTCTGTATTATGGAATaGATGGAGGGCCAGATGCTG +
Preference number: 4 (lower is better)
Translates to: PFKCTLVQLYSRYLCLQKFCIME*MEGQML
Trigger: CAGCATCTGGCCCTCCATGCATTCCATAATACAGAA...TTTCTGAAGGCAGAGATATCTACTGTATAATTGCACCAAAGTACATTTGAAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CCA 90 bp GACATCAATACCAAGTTTGTGCACCACTTGGTAAAAGATTGCAATAAAAATCAGGTGACCTTCTTCAAATaGCCCTTGGCAATATCTCGT +
Preference number: 4 (lower is better)
Translates to: DINTKFVHHLVKDCNKNQVTFFK*PLAISR
Trigger: ACGAGATATTGCCAAGGGCCATTTGAAGAAGGTCAC...CTGATTTTTATTGCAATCTTTTACCAAGTGGTGCACAAACTTGGTATTGATGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CCA 90 bp CCTTTCAAATGTACTTTGGTGCAATTATACAGTAGATATCTCTGCCTTCAGAAACAGCTCCTATGCCATTaGCAGCATACAGATTCTTTG +
Preference number: 4 (lower is better)
Translates to: PFKCTLVQLYSRYLCLQKQLLCH*QHTDSL
Trigger: CAAAGAATCTGTATGCTGCCAATGGCATAGGAGCTG...TTTCTGAAGGCAGAGATATCTACTGTATAATTGCACCAAAGTACATTTGAAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CCA 90 bp ATAAAGAAGATGAGACATCTGCCACAGTTTCAGTCAAACCTTTGTAGGAATGATCGAAAATATCCTTTGTaGGCCAAAACAGCTCCTATG +
Preference number: 4 (lower is better)
Translates to: IKKMRHLPQFQSNLCRNDRKYPL*AKTAPM
Trigger: CATAGGAGCTGTTTTGGCCCACAAAGGATATTTTCG...ATCATTCCTACAAAGGTTTGACTGAAACTGTGGCAGATGTCTCATCTTCTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR GCA 90 bp GACATCAATACCAAGTTTGTGCACCACTTGGTAAAAGATTGCAATAAAAATCAGCTCAAAGCACTGAGATaGATTTTCTTTGTCACCTCG +
Preference number: 4 (lower is better)
Translates to: DINTKFVHHLVKDCNKNQLKALR*IFFVTS
Trigger: CGAGGTGACAAAGAAAATGCATCTCAGTGCTTTGAG...CTGATTTTTATTGCAATCTTTTACCAAGTGGTGCACAAACTTGGTATTGATGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR GCA 90 bp GACATCAATACCAAGTTTGTGCACCACTTGGTAAAAGATTGCAATAAAAATCAGTCAGCAAAGTCTGTTTaGATTCCTGTAACTTGCCAC +
Preference number: 4 (lower is better)
Translates to: DINTKFVHHLVKDCNKNQSAKSV*IPVTCH
Trigger: GTGGCAAGTTACAGGAATGCAAACAGACTTTGCTGA...CTGATTTTTATTGCAATCTTTTACCAAGTGGTGCACAAACTTGGTATTGATGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR GCA 90 bp TTTTCACATATGATAGGTGGAATTGTACCACAAAGAATAGTCTCATTTGCACGAAGCCTTTTTCTTCTCTaGTTTTGGTGGACGTCGTTT +
Preference number: 4 (lower is better)
Translates to: FSHMIGGIVPQRIVSFARSLFLL*FWWTSF
Trigger: AAACGACGTCCACCAAAAGCAGAGAAGAAAAAGGCT...TCGTGCAAATGAGACTATTCTTTGTGGTACAATTCCACCTATCATATGTGAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CCA 90 bp ATTGTACCACAAAGAATAGTCTCATTTGCACGAGAGACTCAAATATTGGACTCTTCCAAGCAAGTCATCTaGTCTTTTTCATGGTCTCTA +
Preference number: 4 (lower is better)
Translates to: IVPQRIVSFARETQILDSSKQVI*SFSWSL
Trigger: TAGAGACCATGAAAAAGACCAGATGACTTGCTTGGA...AGAGTCCAATATTTGAGTCTCTCGTGCAAATGAGACTATTCTTTGTGGTACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CCA 90 bp GCAGTTTTCACATATGATAGGTGGAATTGTACCACAAAGAATAGTCTCATTTGCAGGTATCACTCTGTGTaGATGGCTGTTTTAATATCC +
Preference number: 4 (lower is better)
Translates to: AVFTYDRWNCTTKNSLICRYHSV*MAVLIS
Trigger: GGATATTAAAACAGCCATCCACACAGAGTGATACCT...GCAAATGAGACTATTCTTTGTGGTACAATTCCACCTATCATATGTGAAAACTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CCA 90 bp TTTTCACATATGATAGGTGGAATTGTACCACAAAGAATAGTCTCATTTGCACGAGTACTTGTTTGTAGATaGCCAGAGCACGATCTTGAT +
Preference number: 4 (lower is better)
Translates to: FSHMIGGIVPQRIVSFARVLVCR*PEHDLD
Trigger: ATCAAGATCGTGCTCTGGCCATCTACAAACAAGTAC...TCGTGCAAATGAGACTATTCTTTGTGGTACAATTCCACCTATCATATGTGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CCA 90 bp CCTTTCAAATGTACTTTGGTGCAATTATACAGTAGATATCTCTGCCTTCAGAAAATTGTTGGATCCCTCTaGTTCCGATTCATTTCCAGA +
Preference number: 4 (lower is better)
Translates to: PFKCTLVQLYSRYLCLQKIVGSL*FRFISR
Trigger: TCTGGAAATGAATCGGAACCAGAGGGATCCAACAAT...TTTCTGAAGGCAGAGATATCTACTGTATAATTGCACCAAAGTACATTTGAAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CCA 90 bp CCACAAAGAATAGTCTCATTTGCACGAGAGACTCAAATATTGGACTCTAGCACAACAGGAAATGTCTCTTaGGGCTTAGTAATATACAAA +
Preference number: 4 (lower is better)
Translates to: PQRIVSFARETQILDSSTTGNVS*GLVIYK
Trigger: TTTGTATATTACTAAGCCCCAAGAGACATTTCCTGT...TGTGCTAGAGTCCAATATTTGAGTCTCTCGTGCAAATGAGACTATTCTTTGTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR TCA 90 bp GACATCAATACCAAGTTTGTGCACCACTTGGTAAAAGATTGCAATAAAAATCAGAGTTTCACAAAGCAATaGCCCATTCCTAAACGAACT +
Preference number: 4 (lower is better)
Translates to: DINTKFVHHLVKDCNKNQSFTKQ*PIPKRT
Trigger: AGTTCGTTTAGGAATGGGTCATTGCTTTGTGAAACT...CTGATTTTTATTGCAATCTTTTACCAAGTGGTGCACAAACTTGGTATTGATGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR TCA 90 bp GCAGTTTTCACATATGATAGGTGGAATTGTACCACAAAGAATAGTCTCATTTGCCATCAGTGTCATCATTaGCAAATTCATCAAACTCTC +
Preference number: 4 (lower is better)
Translates to: AVFTYDRWNCTTKNSLICHQCHH*QIHQTL
Trigger: GAGAGTTTGATGAATTTGTCAATGATGACACTGATG...GCAAATGAGACTATTCTTTGTGGTACAATTCCACCTATCATATGTGAAAACTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR GCA 90 bp GACATCAATACCAAGTTTGTGCACCACTTGGTAAAAGATTGCAATAAAAATCAGAAAGCAATCCATATGTaGAGTTGTGTGTGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: DINTKFVHHLVKDCNKNQKAIHM*SCVCSC
Trigger: ACAGGAACACACACAACTGCACATATGGATTGCTTT...CTGATTTTTATTGCAATCTTTTACCAAGTGGTGCACAAACTTGGTATTGATGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR GCA 90 bp ATAAAGAAGATGAGACATCTGCCACAGTTTCAGTCAAACCTTTGTAGGAATGATATTGCCATCTATACGTaGTGCTTCCAACAATTTTAC +
Preference number: 4 (lower is better)
Translates to: IKKMRHLPQFQSNLCRNDIAIYT*CFQQFY
Trigger: GTAAAATTGTTGGAAGCAGCACGTATAGATGGCAAT...ATCATTCCTACAAAGGTTTGACTGAAACTGTGGCAGATGTCTCATCTTCTTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR GCA 90 bp TTTTCACATATGATAGGTGGAATTGTACCACAAAGAATAGTCTCATTTGCACGACTCTATAGTCCAAATTaGCATCTATACGTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: FSHMIGGIVPQRIVSFARLYSPN*HLYVLL
Trigger: AAGCAGCACGTATAGATGGCAATTTGGACTATAGAG...TCGTGCAAATGAGACTATTCTTTGTGGTACAATTCCACCTATCATATGTGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR GCA 90 bp GCAGTTTTCACATATGATAGGTGGAATTGTACCACAAAGAATAGTCTCATTTGCACCCCATTCTTGTTTTaGCAAATGAAGATTGCCAAT +
Preference number: 4 (lower is better)
Translates to: AVFTYDRWNCTTKNSLICTPFLF*QMKIAN
Trigger: ATTGGCAATCTTCATTTGGCAAAACAAGAATGGGGT...GCAAATGAGACTATTCTTTGTGGTACAATTCCACCTATCATATGTGAAAACTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR GCA 90 bp ATAAAGAAGATGAGACATCTGCCACAGTTTCAGTCAAACCTTTGTAGGAATGATACTAATATCTGCTGTTaGTTCTCTTACTTGGGCAAA +
Preference number: 4 (lower is better)
Translates to: IKKMRHLPQFQSNLCRNDTNICC*FSYLGK
Trigger: TTTGCCCAAGTAAGAGAAGCAACAGCAGATATTAGT...ATCATTCCTACAAAGGTTTGACTGAAACTGTGGCAGATGTCTCATCTTCTTTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR GCA 90 bp TTTTCACATATGATAGGTGGAATTGTACCACAAAGAATAGTCTCATTTGCACGAACTGAAGTATCTATGTaGAAGCTCCAGTTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: FSHMIGGIVPQRIVSFARTEVSM*KLQFFH
Trigger: GTGAAAGAACTGGAGCTTGCACATAGATACTTCAGT...TCGTGCAAATGAGACTATTCTTTGTGGTACAATTCCACCTATCATATGTGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CCA 90 bp TCTACATCGCTGCAGTATTACACTATTGAAAACCTTCCTTTCAAATGTACTTTGTTTCCAAGTCTAAAATaGAGGGCACCCACATTATTG +
Preference number: 4 (lower is better)
Translates to: STSLQYYTIENLPFKCTLFPSLK*RAPTLL
Trigger: CAATAATGTGGGTGCCCTCCATTTTAGACTTGGAAA...CAAAGTACATTTGAAAGGAAGGTTTTCAATAGTGTAATACTGCAGCGATGTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CCA 90 bp TTTTCACATATGATAGGTGGAATTGTACCACAAAGAATAGTCTCATTTGCACGAAGTTTTTCTGCTTCATaGAATTCACACATCGCCTCA +
Preference number: 4 (lower is better)
Translates to: FSHMIGGIVPQRIVSFARSFSAS*NSHIAS
Trigger: TGAGGCGATGTGTGAATTCCATGAAGCAGAAAAACT...TCGTGCAAATGAGACTATTCTTTGTGGTACAATTCCACCTATCATATGTGAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CCA 90 bp TCTACATCGCTGCAGTATTACACTATTGAAAACCTTCCTTTCAAATGTACTTTGCAAAGACCAAGCATCTaGATGATCCTGATTAATCTG +
Preference number: 4 (lower is better)
Translates to: STSLQYYTIENLPFKCTLQRPSI*MILINL
Trigger: CAGATTAATCAGGATCATCCAGATGCTTGGTCTTTG...CAAAGTACATTTGAAAGGAAGGTTTTCAATAGTGTAATACTGCAGCGATGTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR TCA 90 bp TTTTCACATATGATAGGTGGAATTGTACCACAAAGAATAGTCTCATTTGCACGATCTTGTTTTGCCAAATaGAGATTGCCAATCAAAGAC +
Preference number: 4 (lower is better)
Translates to: FSHMIGGIVPQRIVSFARSCFAK*RLPIKD
Trigger: GTCTTTGATTGGCAATCTTCATTTGGCAAAACAAGA...TCGTGCAAATGAGACTATTCTTTGTGGTACAATTCCACCTATCATATGTGAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR GCA 90 bp TCTACATCGCTGCAGTATTACACTATTGAAAACCTTCCTTTCAAATGTACTTTGGCCATCTATACGTGCTaGTTCCAACAATTTTACAAA +
Preference number: 4 (lower is better)
Translates to: STSLQYYTIENLPFKCTLAIYTC*FQQFYK
Trigger: TTTGTAAAATTGTTGGAAGCAGCACGTATAGATGGC...CAAAGTACATTTGAAAGGAAGGTTTTCAATAGTGTAATACTGCAGCGATGTAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR GCA 90 bp CCTTTCAAATGTACTTTGGTGCAATTATACAGTAGATATCTCTGCCTTCAGAAATTGTACATAATACGCTaGCAATGTATCCAAGCAAGT +
Preference number: 4 (lower is better)
Translates to: PFKCTLVQLYSRYLCLQKLYIIR*QCIQAS
Trigger: ACTTGCTTGGATACATTGGCAGCGTATTATGTACAA...TTTCTGAAGGCAGAGATATCTACTGTATAATTGCACCAAAGTACATTTGAAAGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR GCA 90 bp GACATCAATACCAAGTTTGTGCACCACTTGGTAAAAGATTGCAATAAAAATCAGTGGGTTAGTACGCAATaGTTTCTTATAGTAAGCAAG +
Preference number: 4 (lower is better)
Translates to: DINTKFVHHLVKDCNKNQWVSTQ*FLIVSK
Trigger: CTTGCTTACTATAAGAAAGCATTGCGTACTAACCCA...CTGATTTTTATTGCAATCTTTTACCAAGTGGTGCACAAACTTGGTATTGATGTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR GCA 90 bp TCTACATCGCTGCAGTATTACACTATTGAAAACCTTCCTTTCAAATGTACTTTGCACATCACTAATATCTaGTGTTGCTTCTCTTACTTG +
Preference number: 4 (lower is better)
Translates to: STSLQYYTIENLPFKCTLHITNI*CCFSYL
Trigger: CAAGTAAGAGAAGCAACAGCAGATATTAGTGATGTG...CAAAGTACATTTGAAAGGAAGGTTTTCAATAGTGTAATACTGCAGCGATGTAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR GCA 90 bp GCAGTTTTCACATATGATAGGTGGAATTGTACCACAAAGAATAGTCTCATTTGCTCTTTAAGAAGTTTCTaGCTTAACAGCTCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: AVFTYDRWNCTTKNSLICSLRSF*LNSSFS
Trigger: AGAAAAGGAGCTGTTAAGGCAGAAACTTCTTAAAGA...GCAAATGAGACTATTCTTTGTGGTACAATTCCACCTATCATATGTGAAAACTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CCA 90 bp CCTTTCAAATGTACTTTGGTGCAATTATACAGTAGATATCTCTGCCTTCAGAAAATGAGGCAAACTGTGTaGCTTGATAATAGTACTGAA +
Preference number: 4 (lower is better)
Translates to: PFKCTLVQLYSRYLCLQKMRQTV*LDNSTE
Trigger: TTCAGTACTATTATCAAGCCACACAGTTTGCCTCAT...TTTCTGAAGGCAGAGATATCTACTGTATAATTGCACCAAAGTACATTTGAAAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CCA 90 bp TTTTCACATATGATAGGTGGAATTGTACCACAAAGAATAGTCTCATTTGCACGATCTTCAAATGGCCCTTaGCAATATCTCGTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: FSHMIGGIVPQRIVSFARSSNGP*QYLVFL
Trigger: AAGAAAAACGAGATATTGCCAAGGGCCATTTGAAGA...TCGTGCAAATGAGACTATTCTTTGTGGTACAATTCCACCTATCATATGTGAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CCA 90 bp TTTTCACATATGATAGGTGGAATTGTACCACAAAGAATAGTCTCATTTGCACGAGGCTGGAATATTATTTaGAGACTGATTGAGTACAAA +
Preference number: 4 (lower is better)
Translates to: FSHMIGGIVPQRIVSFARGWNII*RLIEYK
Trigger: TTTGTACTCAATCAGTCTCCAAATAATATTCCAGCC...TCGTGCAAATGAGACTATTCTTTGTGGTACAATTCCACCTATCATATGTGAAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS TCA 90 bp CGCCGCTCCGCAGCCGGTAGTCTCCGCTTCAGGCTAATCCAGAGGTaGGTGACGGCTCCGGCTCTGGTCTTGACTGCCGCCCCGCGGCGC +
Preference number: 5 (lower is better)
Translates to: RRSAAGSLRFRLIQR*VTAPALVLTAAPRR
Trigger: GCGCCGCGGGGCGGCAGTCAAGACCAGAGCCGGAGCCGTCACTCACCTCTGGATTAGCCTGAAGCGGAGACTACCGGCTGCGGAGCGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS GCA 90 bp CAGGCTAATCCAGAGGTGAGTGACGGCTCCGGCTCTGGTCTTGACTaGCGCCCCGCGGCGCCGCTGGAGCTCTGGCTTCTCCTTCCCGTC +
Preference number: 5 (lower is better)
Translates to: QANPEVSDGSGSGLD*RPAAPLELWLLLPV
Trigger: GACGGGAAGGAGAAGCCAGAGCTCCAGCGGCGCCGCGGGGCGGCAGTCAAGACCAGAGCCGGAGCCGTCACTCACCTCTGGATTAGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS TCA 90 bp CCGGAGGGCCTTCTCTTTCTGGATGGCTGGTCACTGTCTGAGTCCTaGTCTGACCGCTGTCTTCGTGGCCTCCGGGGACTGCCGGCCTCG +
Preference number: 5 (lower is better)
Translates to: PEGLLFLDGWSLSES*SDRCLRGLRGLPAS
Trigger: CGAGGCCGGCAGTCCCCGGAGGCCACGAAGACAGCGGTCAGATCAGGACTCAGACAGTGACCAGCCATCCAGAAAGAGAAGGCCCTCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS GCA 90 bp CTTGCTCTTGCTTGGCCCGCAGCTCCCGCTCTTCTTCATCTTGTTTaGGTGCCCGGGCCACATGGTACTGGGCCTGGCTCAGTAAGTCAG +
Preference number: 5 (lower is better)
Translates to: LALAWPAAPALLHLV*VPGPHGTGPGSVSQ
Trigger: CTGACTTACTGAGCCAGGCCCAGTACCATGTGGCCCGGGCACGCAAACAAGATGAAGAAGAGCGGGAGCTGCGGGCCAAGCAAGAGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361367.7
ENST00000529898.1
CDS GCA 90 bp GATCTGACCGCTGTCTTCGTGGCCTCCGGGGACTGCCGGCCTCGCTaGCAGACTTGTTCTGGTTCTCATCGGAATCACTCTCTGATGAGG +
Preference number: 5 (lower is better)
Translates to: DLTAVFVASGDCRPR*QTCSGSHRNHSLMR
Trigger: CCTCATCAGAGAGTGATTCCGATGAGAACCAGAACAAGTCTGGCAGCGAGGCCGGCAGTCCCCGGAGGCCACGAAGACAGCGGTCAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS GCA 90 bp TGTCTGAGTCCTGATCTGACCGCTGTCTTCGTGGCCTCCGGGGACTaGCGGCCTCGCTGCCAGACTTGTTCTGGTTCTCATCGGAATCAC +
Preference number: 5 (lower is better)
Translates to: CLSPDLTAVFVASGD*RPRCQTCSGSHRNH
Trigger: GTGATTCCGATGAGAACCAGAACAAGTCTGGCAGCGAGGCCGGCAGTCCCCGGAGGCCACGAAGACAGCGGTCAGATCAGGACTCAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS CCA 90 bp CGCAGCTCCCGCTCTTCTTCATCTTGTTTGCGTGCCCGGGCCACATaGTACTGGGCCTGGCTCAGTAAGTCAGAACACTGCCTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: RSSRSSSSCLRARAT*YWAWLSKSEHCLAS
Trigger: AGAAGCCAGGCAGTGTTCTGACTTACTGAGCCAGGCCCAGTACCATGTGGCCCGGGCACGCAAACAAGATGAAGAAGAGCGGGAGCTGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS CCA 90 bp TCCCGCTCTTCTTCATCTTGTTTGCGTGCCCGGGCCACATGGTACTaGGCCTGGCTCAGTAAGTCAGAACACTGCCTGGCTTCTGTAGCA +
Preference number: 5 (lower is better)
Translates to: SRSSSSCLRARATWY*AWLSKSEHCLASVA
Trigger: TGCTACAGAAGCCAGGCAGTGTTCTGACTTACTGAGCCAGGCCCAGTACCATGTGGCCCGGGCACGCAAACAAGATGAAGAAGAGCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS CCA 90 bp CTTCGTGGCCTCCGGGGACTGCCGGCCTCGCTGCCAGACTTGTTCTaGTTCTCATCGGAATCACTCTCTGATGAGGCACATTTCTTTCGT +
Preference number: 5 (lower is better)
Translates to: LRGLRGLPASLPDLF*FSSESLSDEAHFFR
Trigger: ACGAAAGAAATGTGCCTCATCAGAGAGTGATTCCGATGAGAACCAGAACAAGTCTGGCAGCGAGGCCGGCAGTCCCCGGAGGCCACGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS CCA 90 bp CGCAGCTCCCGCTCTTCTTCATCTTGTTTGCGTGCCCGGGCCACATaGTACTGGGCCTGGCTCAGTAAGTCAGAACACTGCCTAGAACAT +
Preference number: 5 (lower is better)
Translates to: RSSRSSSSCLRARAT*YWAWLSKSEHCLEH
Trigger: ATGTTCTAGGCAGTGTTCTGACTTACTGAGCCAGGCCCAGTACCATGTGGCCCGGGCACGCAAACAAGATGAAGAAGAGCGGGAGCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529898.1
CDS GCA 90 bp ACTCCTGAGTGGCTTCTCCCTGACTGCACAGATTCATTGTCAGACTaGTCAGAACCGGAGGGCCTTCTCTTTCTGGATGGCTGGTCACTG +
Preference number: 5 (lower is better)
Translates to: TPEWLLPDCTDSLSD*SEPEGLLFLDGWSL
Trigger: CAGTGACCAGCCATCCAGAAAGAGAAGGCCCTCCGGTTCTGAGCAGTCTGACAATGAATCTGTGCAGTCAGGGAGAAGCCACTCAGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp GTGAAATTATCCTTGGTCTGCCCAGCTCTCCAGTGCGTTTCGAGGGGCCGCATCTCTGTGAAATTATCCTaGGTCTGCCCAGCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: VKLSLVCPALQCVSRGRISVKLS*VCPALQ
Trigger: CTGGAGAGCTGGGCAGACCAAGGATAATTTCACAGA...GATGCGGCCCCTCGAAACGCACTGGAGAGCTGGGCAGACCAAGGATAATTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532365.2
CDS TCA 90 bp GAGCCTTGGCCAGAACCCTCATTATCAGATCCTCTCTCCGATTCGTaGTCTGATTCGGCACTTGGAGAAGCTGGGCGAGAGTCGTTCTCA +
Preference number: 5 (lower is better)
Translates to: EPWPEPSLSDPLSDS*SDSALGEAGRESFS
Trigger: TGAGAACGACTCTCGCCCAGCTTCTCCAAGTGCCGAATCAGATCACGAATCGGAGAGAGGATCTGATAATGAGGGTTCTGGCCAAGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS CCA 90 bp CAGATTCATTGTCAGACTGCTCAGAACCGGAGGGCCTTCTCTTTCTaGATGGCTGGTCACTGTCTGAGTCCTGATCTGACCGCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: QIHCQTAQNRRAFSF*MAGHCLSPDLTAVF
Trigger: GAAGACAGCGGTCAGATCAGGACTCAGACAGTGACCAGCCATCCAGAAAGAGAAGGCCCTCCGGTTCTGAGCAGTCTGACAATGAATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS CCA 90 bp GCACTTGGAGAAGCTGGGCGAGAGTCGTTCTCAGAAACTCCTGAGTaGCTTCTCCCTGACTGCACAGATTCATTGTCAGACTGCTCAGAA +
Preference number: 5 (lower is better)
Translates to: ALGEAGRESFSETPE*LLPDCTDSLSDCSE
Trigger: TTCTGAGCAGTCTGACAATGAATCTGTGCAGTCAGGGAGAAGCCACTCAGGAGTTTCTGAGAACGACTCTCGCCCAGCTTCTCCAAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp TCTACATCGCTGCAGTATTACACTATTGAAAACCTTCCTTTCAAATGTACTTTGGCTCCGGCTCTGGTCTaGACTGCCGCCCCGCGGCGC +
Preference number: 5 (lower is better)
Translates to: STSLQYYTIENLPFKCTLAPALV*TAAPRR
Trigger: GCGCCGCGGGGCGGCAGTCAAGACCAGAGCCGGAGC...CAAAGTACATTTGAAAGGAAGGTTTTCAATAGTGTAATACTGCAGCGATGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp GAAATTATCCTTGGTCTGCCCAGCTCTCCAGTGCGTTTCGAGGGGCCGCATCGCTTATTTTTCCCTTCATaGATGGAGGCAGACGTTCTG +
Preference number: 5 (lower is better)
Translates to: EIILGLPSSPVRFEGPHRLFFPS*MEADVL
Trigger: CAGAACGTCTGCCTCCATCAATGAAGGGAAAAATAA...GCGATGCGGCCCCTCGAAACGCACTGGAGAGCTGGGCAGACCAAGGATAATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532365.2
CDS TCA 90 bp TTGGCCAGAACCCTCATTATCAGATCCTCTCTCCGATTCGTGATCTaGTTCGGCACTTGGAGAAGCTGGGCGAGAGTCGTTCTCAGAAAC +
Preference number: 5 (lower is better)
Translates to: LARTLIIRSSLRFVI*FGTWRSWARVVLRN
Trigger: GTTTCTGAGAACGACTCTCGCCCAGCTTCTCCAAGTGCCGAATCAGATCACGAATCGGAGAGAGGATCTGATAATGAGGGTTCTGGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp GTGAAATTATCCTTGGTCTGCCCAGCTCTCCAGTGCGTTTCGAGGGGCCGCATCTTTAAGGAGTATCTTTaGGAACTAGCATGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: VKLSLVCPALQCVSRGRIFKEYL*ELACPG
Trigger: TCCAGGACATGCTAGTTCCAAAAGATACTCCTTAAA...GATGCGGCCCCTCGAAACGCACTGGAGAGCTGGGCAGACCAAGGATAATTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532365.2
CDS CCA 90 bp GTTTCCAAGTCTAAAATGGAGGGCACCCACATTATTGAGAATCTCTaGAGGAACATCGGCCTGCACTTTCTCCTGAAGGATTCGTGTTGC +
Preference number: 5 (lower is better)
Translates to: VSKSKMEGTHIIENL*RNIGLHFLLKDSCC
Trigger: GCAACACGAATCCTTCAGGAGAAAGTGCAGGCCGATGTTCCTCCAGAGATTCTCAATAATGTGGGTGCCCTCCATTTTAGACTTGGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS GCA 90 bp GTGGGCCAAAACAGCTCCTATGCCATTGGCAGCATACAGATTCTTTaGATCATTTCTGAGTACTTGTTTGTAGATGGCCAGAGCACGATC +
Preference number: 5 (lower is better)
Translates to: VGQNSSYAIGSIQIL*IISEYLFVDGQSTI
Trigger: GATCGTGCTCTGGCCATCTACAAACAAGTACTCAGAAATGATGCAAAGAATCTGTATGCTGCCAATGGCATAGGAGCTGTTTTGGCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361367.7
ENST00000526874.5
ENST00000529355.1
CDS-3UTR CAA 90 bp ATTGTACCACAAAGAATAGTCTCATTTGCACGAGAGACTCAAATATTGGACTCTCCGCTCTTCTTCATCTaGTTTGCGTGCCCGGGCCAC +
Preference number: 5 (lower is better)
Translates to: IVPQRIVSFARETQILDSPLFFI*FACPGH
Trigger: GTGGCCCGGGCACGCAAACAAGATGAAGAAGAGCGG...AGAGTCCAATATTTGAGTCTCTCGTGCAAATGAGACTATTCTTTGTGGTACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp CCTAAAGTCTGTGAAATTATCCTTGGTCTGCCCAGCTCTCCAGTGCGTTTCGAGCCGAAGAGTCATCACTaGATGAAATTATGGCTTTGG +
Preference number: 5 (lower is better)
Translates to: PKVCEIILGLPSSPVRFEPKSHH*MKLWLW
Trigger: CCAAAGCCATAATTTCATCAAGTGATGACTCTTCGG...CTCGAAACGCACTGGAGAGCTGGGCAGACCAAGGATAATTTCACAGACTTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532365.2
CDS-3UTR CAA 90 bp CCACAAAGAATAGTCTCATTTGCACGAGAGACTCAAATATTGGACTCTAGCACAGTTTGGAGCCACACGTaGCCAAGGGCTAGCATAGAA +
Preference number: 5 (lower is better)
Translates to: PQRIVSFARETQILDSSTVWSHT*PRASIE
Trigger: TTCTATGCTAGCCCTTGGCAACGTGTGGCTCCAAAC...TGTGCTAGAGTCCAATATTTGAGTCTCTCGTGCAAATGAGACTATTCTTTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp CCTTTCAAATGTACTTTGGTGCAATTATACAGTAGATATCTCTGCCTTCAGAAACTCCTTTTCTTGCTCTaGCTTGGCCCGCAGCTCCCG +
Preference number: 5 (lower is better)
Translates to: PFKCTLVQLYSRYLCLQKLLFLL*LGPQLP
Trigger: CGGGAGCTGCGGGCCAAGCAAGAGCAAGAAAAGGAG...TTTCTGAAGGCAGAGATATCTACTGTATAATTGCACCAAAGTACATTTGAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp ATAAAGAAGATGAGACATCTGCCACAGTTTCAGTCAAACCTTTGTAGGAATGATGTTCCGCTTCTGCTTTaGCACGGTCCAATGACGCCA +
Preference number: 5 (lower is better)
Translates to: IKKMRHLPQFQSNLCRNDVPLLL*HGPMTP
Trigger: TGGCGTCATTGGACCGTGCAAAAGCAGAAGCGGAAC...ATCATTCCTACAAAGGTTTGACTGAAACTGTGGCAGATGTCTCATCTTCTTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp CCTTTCAAATGTACTTTGGTGCAATTATACAGTAGATATCTCTGCCTTCAGAAATTTTCTTGCTCTTGCTaGGCCCGCAGCTCCCGCTCT +
Preference number: 5 (lower is better)
Translates to: PFKCTLVQLYSRYLCLQKFSCSC*ARSSRS
Trigger: AGAGCGGGAGCTGCGGGCCAAGCAAGAGCAAGAAAA...TTTCTGAAGGCAGAGATATCTACTGTATAATTGCACCAAAGTACATTTGAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS CCA 90 bp AAGTTCAGCCACACATCACTAATATCTGCTGTTGCTTCTCTTACTTaGGCAAATACATCACGAGCTTCACGAAAATATCCTTTGTGGGCC +
Preference number: 5 (lower is better)
Translates to: KFSHTSLISAVASLT*ANTSRASRKYPLWA
Trigger: GGCCCACAAAGGATATTTTCGTGAAGCTCGTGATGTATTTGCCCAAGTAAGAGAAGCAACAGCAGATATTAGTGATGTGTGGCTGAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361367.7
ENST00000526874.5
ENST00000529355.1
CDS-3UTR CAA 90 bp CCACAAAGAATAGTCTCATTTGCACGAGAGACTCAAATATTGGACTCTAGCACAGCTGATGTACTGCTTTaGCTCCACATAGATGTGTGC +
Preference number: 5 (lower is better)
Translates to: PQRIVSFARETQILDSSTADVLL*LHIDVC
Trigger: GCACACATCTATGTGGAGCAAAAGCAGTACATCAGC...TGTGCTAGAGTCCAATATTTGAGTCTCTCGTGCAAATGAGACTATTCTTTGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp TCTACATCGCTGCAGTATTACACTATTGAAAACCTTCCTTTCAAATGTACTTTGTGTAACTTGCCACACTaGAAGAGGGCCCGGGCCAAA +
Preference number: 5 (lower is better)
Translates to: STSLQYYTIENLPFKCTLCNLPH*KRARAK
Trigger: TTTGGCCCGGGCCCTCTTCAAGTGTGGCAAGTTACA...CAAAGTACATTTGAAAGGAAGGTTTTCAATAGTGTAATACTGCAGCGATGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp GCAGTTTTCACATATGATAGGTGGAATTGTACCACAAAGAATAGTCTCATTTGCGGCAGACGTTCTGGCTaGGGAGCCTTTTTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: AVFTYDRWNCTTKNSLICGRRSG*GAFFFS
Trigger: AGAGAAGAAAAAGGCTCCCAAGCCAGAACGTCTGCC...GCAAATGAGACTATTCTTTGTGGTACAATTCCACCTATCATATGTGAAAACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp GACATCAATACCAAGTTTGTGCACCACTTGGTAAAAGATTGCAATAAAAATCAGGCCTCGCTGCCAGACTaGTTCTGGTTCTCATCGGAA +
Preference number: 5 (lower is better)
Translates to: DINTKFVHHLVKDCNKNQASLPD*FWFSSE
Trigger: TTCCGATGAGAACCAGAACAAGTCTGGCAGCGAGGC...CTGATTTTTATTGCAATCTTTTACCAAGTGGTGCACAAACTTGGTATTGATGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp TCTACATCGCTGCAGTATTACACTATTGAAAACCTTCCTTTCAAATGTACTTTGGATCTGATTCGGCACTaGGAGAAGCTGGGCGAGAGT +
Preference number: 5 (lower is better)
Translates to: STSLQYYTIENLPFKCTLDLIRH*EKLGES
Trigger: ACTCTCGCCCAGCTTCTCCAAGTGCCGAATCAGATC...CAAAGTACATTTGAAAGGAAGGTTTTCAATAGTGTAATACTGCAGCGATGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS GCA 90 bp ATAGCAGCTCTCTGCTTGCATAGCTTCCACTTCTGTATTATGGAATaGATGGAGGGCCAGATGCTGGACTTTACTATAATCCTTTTTGAA +
Preference number: 5 (lower is better)
Translates to: IAALCLHSFHFCIME*MEGQMLDFTIILFE
Trigger: TTCAAAAAGGATTATAGTAAAGTCCAGCATCTGGCCCTCCATGCATTCCATAATACAGAAGTGGAAGCTATGCAAGCAGAGAGCTGCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS GCA 90 bp ATAGCAGCTCTCTGCTTGCATAGCTTCCACTTCTGTATTATGGAATaGATGGAGGGCCAGATGCTGGACTTTACTATAATCCTCTTTATT +
Preference number: 5 (lower is better)
Translates to: IAALCLHSFHFCIME*MEGQMLDFTIILFI
Trigger: AATAAAGAGGATTATAGTAAAGTCCAGCATCTGGCCCTCCATGCATTCCATAATACAGAAGTGGAAGCTATGCAAGCAGAGAGCTGCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524523.1
CDS-3UTR CAA 90 bp CCACAAAGAATAGTCTCATTTGCACGAGAGACTCAAATATTGGACTCTAGCACACTCTTCTGTTTTTCCTaGCTTGTAGTATTCCAGCGC +
Preference number: 5 (lower is better)
Translates to: PQRIVSFARETQILDSSTLFCFS*LVVFQR
Trigger: GCGCTGGAATACTACAAGCAAGGAAAAACAGAAGAG...TGTGCTAGAGTCCAATATTTGAGTCTCTCGTGCAAATGAGACTATTCTTTGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp CCACAAAGAATAGTCTCATTTGCACGAGAGACTCAAATATTGGACTCTAGCACATTCTTTCCGAGCCTGTaGTACATAATACGCTGCCAA +
Preference number: 5 (lower is better)
Translates to: PQRIVSFARETQILDSSTFFPSL*YIIRCQ
Trigger: TTGGCAGCGTATTATGTACAACAGGCTCGGAAAGAA...TGTGCTAGAGTCCAATATTTGAGTCTCTCGTGCAAATGAGACTATTCTTTGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp ATAAAGAAGATGAGACATCTGCCACAGTTTCAGTCAAACCTTTGTAGGAATGATAATGCTCCCACGCATTaGGAATTGAGTTCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: IKKMRHLPQFQSNLCRNDNAPTH*ELSSRA
Trigger: AGCCCTGGAACTCAATTCCAAATGCGTGGGAGCATT...ATCATTCCTACAAAGGTTTGACTGAAACTGTGGCAGATGTCTCATCTTCTTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp CCACAAAGAATAGTCTCATTTGCACGAGAGACTCAAATATTGGACTCTAGCACAACAGCTCCTATGCCATaGGCAGCATACAGATTCTTT +
Preference number: 5 (lower is better)
Translates to: PQRIVSFARETQILDSSTTAPMP*AAYRFF
Trigger: AAAGAATCTGTATGCTGCCAATGGCATAGGAGCTGT...TGTGCTAGAGTCCAATATTTGAGTCTCTCGTGCAAATGAGACTATTCTTTGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp ATTGTACCACAAAGAATAGTCTCATTTGCACGAGAGACTCAAATATTGGACTCTTTGCATTCCTGTAACTaGCCACACTTGAAGAGGGCC +
Preference number: 5 (lower is better)
Translates to: IVPQRIVSFARETQILDSLHSCN*PHLKRA
Trigger: GGCCCTCTTCAAGTGTGGCAAGTTACAGGAATGCAA...AGAGTCCAATATTTGAGTCTCTCGTGCAAATGAGACTATTCTTTGTGGTACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp ATTGTACCACAAAGAATAGTCTCATTTGCACGAGAGACTCAAATATTGGACTCTGACTGCACAGATTCATaGTCAGACTGCTCAGAACCG +
Preference number: 5 (lower is better)
Translates to: IVPQRIVSFARETQILDSDCTDS*SDCSEP
Trigger: CGGTTCTGAGCAGTCTGACAATGAATCTGTGCAGTC...AGAGTCCAATATTTGAGTCTCTCGTGCAAATGAGACTATTCTTTGTGGTACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp TCTACATCGCTGCAGTATTACACTATTGAAAACCTTCCTTTCAAATGTACTTTGTCTGAGGCCTCATTGTaGGATCCCTCTGGTTCCGAT +
Preference number: 5 (lower is better)
Translates to: STSLQYYTIENLPFKCTLSEASL*DPSGSD
Trigger: ATCGGAACCAGAGGGATCCAACAATGAGGCCTCAGA...CAAAGTACATTTGAAAGGAAGGTTTTCAATAGTGTAATACTGCAGCGATGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp TCTACATCGCTGCAGTATTACACTATTGAAAACCTTCCTTTCAAATGTACTTTGCTATCTGAGGCCTCATaGTTGGATCCCTCTGGTTCC +
Preference number: 5 (lower is better)
Translates to: STSLQYYTIENLPFKCTLLSEAS*LDPSGS
Trigger: GGAACCAGAGGGATCCAACAATGAGGCCTCAGATAG...CAAAGTACATTTGAAAGGAAGGTTTTCAATAGTGTAATACTGCAGCGATGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp ATAAAGAAGATGAGACATCTGCCACAGTTTCAGTCAAACCTTTGTAGGAATGATAGGGCACCCACATTATaGAGAATCTCTGGAGGAACA +
Preference number: 5 (lower is better)
Translates to: IKKMRHLPQFQSNLCRNDRAPTL*RISGGT
Trigger: TGTTCCTCCAGAGATTCTCAATAATGTGGGTGCCCT...ATCATTCCTACAAAGGTTTGACTGAAACTGTGGCAGATGTCTCATCTTCTTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp CCTTTCAAATGTACTTTGGTGCAATTATACAGTAGATATCTCTGCCTTCAGAAAGGCCAGAGCACGATCTaGATGACGCTTTTCCTTTTC +
Preference number: 5 (lower is better)
Translates to: PFKCTLVQLYSRYLCLQKGQSTI*MTLFLF
Trigger: GAAAAGGAAAAGCGTCATCAAGATCGTGCTCTGGCC...TTTCTGAAGGCAGAGATATCTACTGTATAATTGCACCAAAGTACATTTGAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp ATTGTACCACAAAGAATAGTCTCATTTGCACGAGAGACTCAAATATTGGACTCTCTCATCTTCACCTTCTaGTTCACTGCCACTACCCTT +
Preference number: 5 (lower is better)
Translates to: IVPQRIVSFARETQILDSLIFTF*FTATTL
Trigger: AAGGGTAGTGGCAGTGAACAAGAAGGTGAAGATGAG...AGAGTCCAATATTTGAGTCTCTCGTGCAAATGAGACTATTCTTTGTGGTACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp GCAGTTTTCACATATGATAGGTGGAATTGTACCACAAAGAATAGTCTCATTTGCTTCATTTCCAGAGCCTaGGCCAGAACCCTCATTATC +
Preference number: 5 (lower is better)
Translates to: AVFTYDRWNCTTKNSLICFISRA*ARTLII
Trigger: GATAATGAGGGTTCTGGCCAAGGCTCTGGAAATGAA...GCAAATGAGACTATTCTTTGTGGTACAATTCCACCTATCATATGTGAAAACTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp CCACAAAGAATAGTCTCATTTGCACGAGAGACTCAAATATTGGACTCTAGCACACGAGAGACTCAAATATaGGACTCTAGCACAGGAAAT +
Preference number: 5 (lower is better)
Translates to: PQRIVSFARETQILDSSTRETQI*DSSTGN
Trigger: ATTTCCTGTGCTAGAGTCCAATATTTGAGTCTCTCG...TGTGCTAGAGTCCAATATTTGAGTCTCTCGTGCAAATGAGACTATTCTTTGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS TCA 90 bp CTTCTTCAAATGGCCCTTGGCAATATCTCGTTTTTCTTGATCTTCTaGGGCAGCATAGAGAGAGCCGAGAATTTTCATAGTTTCGTAATT +
Preference number: 5 (lower is better)
Translates to: LLQMALGNISFFLIF*GSIERAENFHSFVI
Trigger: AATTACGAAACTATGAAAATTCTCGGCTCTCTCTATGCTGCCTCAGAAGATCAAGAAAAACGAGATATTGCCAAGGGCCATTTGAAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS GCA 90 bp CCAAGCAAGTCATCTGGTCTTTTTCATGGTCTCTATAGTCCAAATTaGCATCTATACGTGCTGCTTCCAACAATTTTACAAACTCTTCTG +
Preference number: 5 (lower is better)
Translates to: PSKSSGLFHGLYSPN*HLYVLLPTILQTLL
Trigger: CAGAAGAGTTTGTAAAATTGTTGGAAGCAGCACGTATAGATGGCAATTTGGACTATAGAGACCATGAAAAAGACCAGATGACTTGCTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361367.7
ENST00000524523.1
CDS GCA 90 bp ATTGTCCTTATTCTTTTCTTTCCGAGCCTGTTGTACATAATACGCTaGCAATGTATCCAAGCAAGTCATCTGGTCTTTTTCATGGTCTCT +
Preference number: 5 (lower is better)
Translates to: IVLILFFPSLLYIIR*QCIQASHLVFFMVS
Trigger: AGAGACCATGAAAAAGACCAGATGACTTGCTTGGATACATTGGCAGCGTATTATGTACAACAGGCTCGGAAAGAAAAGAATAAGGACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361367.7
ENST00000524523.1
CDS-3UTR CAA 90 bp CCTTTCAAATGTACTTTGGTGCAATTATACAGTAGATATCTCTGCCTTCAGAAAATAGCAGCTCTCTGCTaGCATAGCTTCCACTTCTGT +
Preference number: 5 (lower is better)
Translates to: PFKCTLVQLYSRYLCLQKIAALC*HSFHFC
Trigger: ACAGAAGTGGAAGCTATGCAAGCAGAGAGCTGCTAT...TTTCTGAAGGCAGAGATATCTACTGTATAATTGCACCAAAGTACATTTGAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp GACATCAATACCAAGTTTGTGCACCACTTGGTAAAAGATTGCAATAAAAATCAGCCTGAAGGATTCGTGTaGCTGTTCCATAGGCTGAAA +
Preference number: 5 (lower is better)
Translates to: DINTKFVHHLVKDCNKNQPEGFV*LFHRLK
Trigger: TTTCAGCCTATGGAACAGCAACACGAATCCTTCAGG...CTGATTTTTATTGCAATCTTTTACCAAGTGGTGCACAAACTTGGTATTGATGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS CCA 90 bp TTAGGATGTTCGCGTAAGATGTTTTTATACAGTTTTTCTGCTTCATaGAATTCACACATCGCCTCATATAGCCTGGCGAGATTATATGAC +
Preference number: 5 (lower is better)
Translates to: LGCSRKMFLYSFSAS*NSHIASYSLARLYD
Trigger: GTCATATAATCTCGCCAGGCTATATGAGGCGATGTGTGAATTCCATGAAGCAGAAAAACTGTATAAAAACATCTTACGCGAACATCCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp GACATCAATACCAAGTTTGTGCACCACTTGGTAAAAGATTGCAATAAAAATCAGAAACTGTGCATCAGCTaGATCCATTTTGTCACCCTC +
Preference number: 5 (lower is better)
Translates to: DINTKFVHHLVKDCNKNQKLCIS*IHFVTL
Trigger: GAGGGTGACAAAATGGATCAAGCTGATGCACAGTTT...CTGATTTTTATTGCAATCTTTTACCAAGTGGTGCACAAACTTGGTATTGATGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp ATTGTACCACAAAGAATAGTCTCATTTGCACGAGAGACTCAAATATTGGACTCTTCAGCCTCTTTATTGTaGAGTTCTAGAACAGCCAGT +
Preference number: 5 (lower is better)
Translates to: IVPQRIVSFARETQILDSSASLL*SSRTAS
Trigger: ACTGGCTGTTCTAGAACTCAACAATAAAGAGGCTGA...AGAGTCCAATATTTGAGTCTCTCGTGCAAATGAGACTATTCTTTGTGGTACAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp ATTGTACCACAAAGAATAGTCTCATTTGCACGAGAGACTCAAATATTGGACTCTGAATCAGCCTCTTTATaGTTGAGTTCTAGAACAGCC +
Preference number: 5 (lower is better)
Translates to: IVPQRIVSFARETQILDSESASL*LSSRTA
Trigger: GGCTGTTCTAGAACTCAACAATAAAGAGGCTGATTC...AGAGTCCAATATTTGAGTCTCTCGTGCAAATGAGACTATTCTTTGTGGTACAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp ATTGTACCACAAAGAATAGTCTCATTTGCACGAGAGACTCAAATATTGGACTCTGGCAAACTGTGTGGCTaGATAATAGTACTGAAAAGC +
Preference number: 5 (lower is better)
Translates to: IVPQRIVSFARETQILDSGKLCG*IIVLKS
Trigger: GCTTTTCAGTACTATTATCAAGCCACACAGTTTGCC...AGAGTCCAATATTTGAGTCTCTCGTGCAAATGAGACTATTCTTTGTGGTACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp GCAGTTTTCACATATGATAGGTGGAATTGTACCACAAAGAATAGTCTCATTTGCGACCCCATTCTTGTTTaGCCAAATGAAGATTGCCAA +
Preference number: 5 (lower is better)
Translates to: AVFTYDRWNCTTKNSLICDPILV*PNEDCQ
Trigger: TTGGCAATCTTCATTTGGCAAAACAAGAATGGGGTC...GCAAATGAGACTATTCTTTGTGGTACAATTCCACCTATCATATGTGAAAACTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp TCTACATCGCTGCAGTATTACACTATTGAAAACCTTCCTTTCAAATGTACTTTGCCCAGGACCCCATTCTaGTTTTGCCAAATGAAGATT +
Preference number: 5 (lower is better)
Translates to: STSLQYYTIENLPFKCTLPRTPF*FCQMKI
Trigger: AATCTTCATTTGGCAAAACAAGAATGGGGTCCTGGG...CAAAGTACATTTGAAAGGAAGGTTTTCAATAGTGTAATACTGCAGCGATGTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp GCAGTTTTCACATATGATAGGTGGAATTGTACCACAAAGAATAGTCTCATTTGCATCATTTCTGAGTACTaGTTTGTAGATGGCCAGAGC +
Preference number: 5 (lower is better)
Translates to: AVFTYDRWNCTTKNSLICIISEY*FVDGQS
Trigger: GCTCTGGCCATCTACAAACAAGTACTCAGAAATGAT...GCAAATGAGACTATTCTTTGTGGTACAATTCCACCTATCATATGTGAAAACTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp GACATCAATACCAAGTTTGTGCACCACTTGGTAAAAGATTGCAATAAAAATCAGTCACGAAAATATCCTTaGTGGGCCAAAACAGCTCCT +
Preference number: 5 (lower is better)
Translates to: DINTKFVHHLVKDCNKNQSRKYP*WAKTAP
Trigger: AGGAGCTGTTTTGGCCCACAAAGGATATTTTCGTGA...CTGATTTTTATTGCAATCTTTTACCAAGTGGTGCACAAACTTGGTATTGATGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp GACATCAATACCAAGTTTGTGCACCACTTGGTAAAAGATTGCAATAAAAATCAGTGTTGCTTCTCTTACTaGGGCAAATACATCACGAGC +
Preference number: 5 (lower is better)
Translates to: DINTKFVHHLVKDCNKNQCCFSY*GKYITS
Trigger: GCTCGTGATGTATTTGCCCAAGTAAGAGAAGCAACA...CTGATTTTTATTGCAATCTTTTACCAAGTGGTGCACAAACTTGGTATTGATGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp ATAAAGAAGATGAGACATCTGCCACAGTTTCAGTCAAACCTTTGTAGGAATGATCTCTTTTCTTCTCTTTaGTTGCTTCAGTCTCACCAG +
Preference number: 5 (lower is better)
Translates to: IKKMRHLPQFQSNLCRNDLFSSL*LLQSHQ
Trigger: CTGGTGAGACTGAAGCAACAAAAGAGAAGAAAAGAG...ATCATTCCTACAAAGGTTTGACTGAAACTGTGGCAGATGTCTCATCTTCTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp CCACAAAGAATAGTCTCATTTGCACGAGAGACTCAAATATTGGACTCTAGCACACTTCTCTTCTTCTTTTaGGATATAGGTAGGTCATCA +
Preference number: 5 (lower is better)
Translates to: PQRIVSFARETQILDSSTLLFFF*DIGRSS
Trigger: TGATGACCTACCTATATCCAAAAAGAAGAAGAGAAG...TGTGCTAGAGTCCAATATTTGAGTCTCTCGTGCAAATGAGACTATTCTTTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp ATTGTACCACAAAGAATAGTCTCATTTGCACGAGAGACTCAAATATTGGACTCTCCGAAGAGTCATCACTaGATGAAATTATGGCTTTGG +
Preference number: 5 (lower is better)
Translates to: IVPQRIVSFARETQILDSPKSHH*MKLWLW
Trigger: CCAAAGCCATAATTTCATCAAGTGATGACTCTTCGG...AGAGTCCAATATTTGAGTCTCTCGTGCAAATGAGACTATTCTTTGTGGTACAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp CCACAAAGAATAGTCTCATTTGCACGAGAGACTCAAATATTGGACTCTAGCACAGGCTTAGGTAGGTTTTaGCATTCTACTAACAGAAAA +
Preference number: 5 (lower is better)
Translates to: PQRIVSFARETQILDSSTGLGRF*HSTNRK
Trigger: TTTTCTGTTAGTAGAATGCAAAAACCTACCTAAGCC...TGTGCTAGAGTCCAATATTTGAGTCTCTCGTGCAAATGAGACTATTCTTTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp TTTTCACATATGATAGGTGGAATTGTACCACAAAGAATAGTCTCATTTGCACGAAATCCATATGTGCAGTaGTGTGTGTTCCTGTTTCAG +
Preference number: 5 (lower is better)
Translates to: FSHMIGGIVPQRIVSFARNPYVQ*CVFLFQ
Trigger: CTGAAACAGGAACACACACAACTGCACATATGGATT...TCGTGCAAATGAGACTATTCTTTGTGGTACAATTCCACCTATCATATGTGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp TTTTCACATATGATAGGTGGAATTGTACCACAAAGAATAGTCTCATTTGCACGATTCAGCAAAGTCTGTTaGCATTCCTGTAACTTGCCA +
Preference number: 5 (lower is better)
Translates to: FSHMIGGIVPQRIVSFARFSKVC*HSCNLP
Trigger: TGGCAAGTTACAGGAATGCAAACAGACTTTGCTGAA...TCGTGCAAATGAGACTATTCTTTGTGGTACAATTCCACCTATCATATGTGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp GACATCAATACCAAGTTTGTGCACCACTTGGTAAAAGATTGCAATAAAAATCAGTTATTTTTCCCTTCATaGATGGAGGCAGACGTTCTG +
Preference number: 5 (lower is better)
Translates to: DINTKFVHHLVKDCNKNQLFFPS*MEADVL
Trigger: CAGAACGTCTGCCTCCATCAATGAAGGGAAAAATAA...CTGATTTTTATTGCAATCTTTTACCAAGTGGTGCACAAACTTGGTATTGATGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp CCTTTCAAATGTACTTTGGTGCAATTATACAGTAGATATCTCTGCCTTCAGAAATTCTTCAAATGGCCCTaGGCAATATCTCGTTTTTCT +
Preference number: 5 (lower is better)
Translates to: PFKCTLVQLYSRYLCLQKFFKWP*AISRFS
Trigger: AGAAAAACGAGATATTGCCAAGGGCCATTTGAAGAA...TTTCTGAAGGCAGAGATATCTACTGTATAATTGCACCAAAGTACATTTGAAAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp GACATCAATACCAAGTTTGTGCACCACTTGGTAAAAGATTGCAATAAAAATCAGATAGTACTGAAAAGCTaGGTCATAATCTTCCTGAAC +
Preference number: 5 (lower is better)
Translates to: DINTKFVHHLVKDCNKNQIVLKS*VIIFLN
Trigger: GTTCAGGAAGATTATGACCAAGCTTTTCAGTACTAT...CTGATTTTTATTGCAATCTTTTACCAAGTGGTGCACAAACTTGGTATTGATGTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS-3UTR CAA 90 bp CCTTTCAAATGTACTTTGGTGCAATTATACAGTAGATATCTCTGCCTTCAGAAATACAACTTCAGTGTTTaGGTGCTTATAGAACTTTCG +
Preference number: 5 (lower is better)
Translates to: PFKCTLVQLYSRYLCLQKYNFSV*VLIELS
Trigger: CGAAAGTTCTATAAGCACCAAAACACTGAAGTTGTA...TTTCTGAAGGCAGAGATATCTACTGTATAATTGCACCAAAGTACATTTGAAAGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS GCA 72 bp CCAGAGGTGAGTGACGGCTCCGGCTCTGGTCTTGACTaGCGCCCCGCGGCGCCGCTGGAGCTCTGGCTTCTC +
Preference number: 6 (lower is better)
Translates to: PEVSDGSGSGLD*RPAAPLELWLL
Trigger: GAGAAGCCAGAGCTCCAGCGGCGCCGCGGGGCGGCAGTCAAGACCAGAGCCGGAGCCGTCACTCACCTCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS TCA 72 bp GCAGCCGGTAGTCTCCGCTTCAGGCTAATCCAGAGGTaGGTGACGGCTCCGGCTCTGGTCTTGACTGCCGCC +
Preference number: 6 (lower is better)
Translates to: AAGSLRFRLIQR*VTAPALVLTAA
Trigger: GGCGGCAGTCAAGACCAGAGCCGGAGCCGTCACTCACCTCTGGATTAGCCTGAAGCGGAGACTACCGGCTGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS GCA 72 bp GCTTGGCCCGCAGCTCCCGCTCTTCTTCATCTTGTTTaGGTGCCCGGGCCACATGGTACTGGGCCTGGCTCA +
Preference number: 6 (lower is better)
Translates to: AWPAAPALLHLV*VPGPHGTGPGS
Trigger: TGAGCCAGGCCCAGTACCATGTGGCCCGGGCACGCAAACAAGATGAAGAAGAGCGGGAGCTGCGGGCCAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361367.7
ENST00000529898.1
CDS GCA 72 bp CCTGATCTGACCGCTGTCTTCGTGGCCTCCGGGGACTaGCGGCCTCGCTGCCAGACTTGTTCTGGTTCTCAT +
Preference number: 6 (lower is better)
Translates to: PDLTAVFVASGD*RPRCQTCSGSH
Trigger: ATGAGAACCAGAACAAGTCTGGCAGCGAGGCCGGCAGTCCCCGGAGGCCACGAAGACAGCGGTCAGATCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS CAA 72 bp CTCTTGCTTGGCCCGCAGCTCCCGCTCTTCTTCATCTaGTTTGCGTGCCCGGGCCACATGGTACTGGGCCTG +
Preference number: 6 (lower is better)
Translates to: LLLGPQLPLFFI*FACPGHMVLGL
Trigger: CAGGCCCAGTACCATGTGGCCCGGGCACGCAAACAAGATGAAGAAGAGCGGGAGCTGCGGGCCAAGCAAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361367.7
ENST00000529898.1
CDS GCA 72 bp GCTGTCTTCGTGGCCTCCGGGGACTGCCGGCCTCGCTaGCAGACTTGTTCTGGTTCTCATCGGAATCACTCT +
Preference number: 6 (lower is better)
Translates to: AVFVASGDCRPR*QTCSGSHRNHS
Trigger: AGAGTGATTCCGATGAGAACCAGAACAAGTCTGGCAGCGAGGCCGGCAGTCCCCGGAGGCCACGAAGACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS CAA 90 bp TCTTGCTCTTGCTTGGCCCGCAGCTCCCGCTCTTCTTCATCTTGTTaGCGTGCCCGGGCCACATGGTACTGGGCCTGGCTCAGTAAGTCA +
Preference number: 6 (lower is better)
Translates to: SCSCLARSSRSSSSC*RARATWYWAWLSKS
Trigger: TGACTTACTGAGCCAGGCCCAGTACCATGTGGCCCGGGCACGCAAACAAGATGAAGAAGAGCGGGAGCTGCGGGCCAAGCAAGAGCAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361367.7
ENST00000529898.1
CDS CAA 90 bp CGCTGTCTTCGTGGCCTCCGGGGACTGCCGGCCTCGCTGCCAGACTaGTTCTGGTTCTCATCGGAATCACTCTCTGATGAGGCACATTTC +
Preference number: 6 (lower is better)
Translates to: RCLRGLRGLPASLPD*FWFSSESLSDEAHF
Trigger: GAAATGTGCCTCATCAGAGAGTGATTCCGATGAGAACCAGAACAAGTCTGGCAGCGAGGCCGGCAGTCCCCGGAGGCCACGAAGACAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS CCA 72 bp CTCCGGGGACTGCCGGCCTCGCTGCCAGACTTGTTCTaGTTCTCATCGGAATCACTCTCTGATGAGGCACAT +
Preference number: 6 (lower is better)
Translates to: LRGLPASLPDLF*FSSESLSDEAH
Trigger: ATGTGCCTCATCAGAGAGTGATTCCGATGAGAACCAGAACAAGTCTGGCAGCGAGGCCGGCAGTCCCCGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS CCA 72 bp TCTTGTTTGCGTGCCCGGGCCACATGGTACTGGGCCTaGCTCAGTAAGTCAGAACACTGCCTGGCTTCTGTA +
Preference number: 6 (lower is better)
Translates to: SCLRARATWYWA*LSKSEHCLASV
Trigger: TACAGAAGCCAGGCAGTGTTCTGACTTACTGAGCCAGGCCCAGTACCATGTGGCCCGGGCACGCAAACAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS CCA 72 bp TCTTCATCTTGTTTGCGTGCCCGGGCCACATGGTACTaGGCCTGGCTCAGTAAGTCAGAACACTGCCTGGCT +
Preference number: 6 (lower is better)
Translates to: SSSCLRARATWY*AWLSKSEHCLA
Trigger: AGCCAGGCAGTGTTCTGACTTACTGAGCCAGGCCCAGTACCATGTGGCCCGGGCACGCAAACAAGATGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS CCA 72 bp CGCTCTTCTTCATCTTGTTTGCGTGCCCGGGCCACATaGTACTGGGCCTGGCTCAGTAAGTCAGAACACTGC +
Preference number: 6 (lower is better)
Translates to: RSSSSCLRARAT*YWAWLSKSEHC
Trigger: GCAGTGTTCTGACTTACTGAGCCAGGCCCAGTACCATGTGGCCCGGGCACGCAAACAAGATGAAGAAGAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361367.7
ENST00000529898.1
CDS GCA 72 bp TGGCTTCTCCCTGACTGCACAGATTCATTGTCAGACTaGTCAGAACCGGAGGGCCTTCTCTTTCTGGATGGC +
Preference number: 6 (lower is better)
Translates to: WLLPDCTDSLSD*SEPEGLLFLDG
Trigger: GCCATCCAGAAAGAGAAGGCCCTCCGGTTCTGAGCAGTCTGACAATGAATCTGTGCAGTCAGGGAGAAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS CCA 72 bp TCTTCATCTTGTTTGCGTGCCCGGGCCACATGGTACTaGGCCTGGCTCAGTAAGTCAGAACACTGCCTAGAA +
Preference number: 6 (lower is better)
Translates to: SSSCLRARATWY*AWLSKSEHCLE
Trigger: TTCTAGGCAGTGTTCTGACTTACTGAGCCAGGCCCAGTACCATGTGGCCCGGGCACGCAAACAAGATGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529898.1
CDS TCA 72 bp CCAGAACCCTCATTATCAGATCCTCTCTCCGATTCGTaGTCTGATTCGGCACTTGGAGAAGCTGGGCGAGAG +
Preference number: 6 (lower is better)
Translates to: PEPSLSDPLSDS*SDSALGEAGRE
Trigger: CTCTCGCCCAGCTTCTCCAAGTGCCGAATCAGATCACGAATCGGAGAGAGGATCTGATAATGAGGGTTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS CCA 72 bp GAAGCTGGGCGAGAGTCGTTCTCAGAAACTCCTGAGTaGCTTCTCCCTGACTGCACAGATTCATTGTCAGAC +
Preference number: 6 (lower is better)
Translates to: EAGRESFSETPE*LLPDCTDSLSD
Trigger: GTCTGACAATGAATCTGTGCAGTCAGGGAGAAGCCACTCAGGAGTTTCTGAGAACGACTCTCGCCCAGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS CAA 72 bp ACTCCTGAGTGGCTTCTCCCTGACTGCACAGATTCATaGTCAGACTGCTCAGAACCGGAGGGCCTTCTCTTT +
Preference number: 6 (lower is better)
Translates to: TPEWLLPDCTDS*SDCSEPEGLLF
Trigger: AAAGAGAAGGCCCTCCGGTTCTGAGCAGTCTGACAATGAATCTGTGCAGTCAGGGAGAAGCCACTCAGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS CAA 72 bp CAGATCCTCTCTCCGATTCGTGATCTGATTCGGCACTaGGAGAAGCTGGGCGAGAGTCGTTCTCAGAAACTC +
Preference number: 6 (lower is better)
Translates to: QILSPIRDLIRH*EKLGESRSQKL
Trigger: GAGTTTCTGAGAACGACTCTCGCCCAGCTTCTCCAAGTGCCGAATCAGATCACGAATCGGAGAGAGGATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS CAA 90 bp TTCTCAGAAACTCCTGAGTGGCTTCTCCCTGACTGCACAGATTCATaGTCAGACTGCTCAGAACCGGAGGGCCTTCTCTTTCTGGATGGC +
Preference number: 6 (lower is better)
Translates to: FSETPEWLLPDCTDS*SDCSEPEGLLFLDG
Trigger: GCCATCCAGAAAGAGAAGGCCCTCCGGTTCTGAGCAGTCTGACAATGAATCTGTGCAGTCAGGGAGAAGCCACTCAGGAGTTTCTGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS CAA 90 bp CCTCATTATCAGATCCTCTCTCCGATTCGTGATCTGATTCGGCACTaGGAGAAGCTGGGCGAGAGTCGTTCTCAGAAACTCCTGAGTGGC +
Preference number: 6 (lower is better)
Translates to: PHYQILSPIRDLIRH*EKLGESRSQKLLSG
Trigger: GCCACTCAGGAGTTTCTGAGAACGACTCTCGCCCAGCTTCTCCAAGTGCCGAATCAGATCACGAATCGGAGAGAGGATCTGATAATGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS TCA 72 bp ACCCTCATTATCAGATCCTCTCTCCGATTCGTGATCTaGTTCGGCACTTGGAGAAGCTGGGCGAGAGTCGTT +
Preference number: 6 (lower is better)
Translates to: TLIIRSSLRFVI*FGTWRSWARVV
Trigger: AACGACTCTCGCCCAGCTTCTCCAAGTGCCGAATCAGATCACGAATCGGAGAGAGGATCTGATAATGAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS CAA 72 bp GACCCATGTTCTGAGCCTCTATCTGAGGCCTCATTGTaGGATCCCTCTGGTTCCGATTCATTTCCAGAGCCT +
Preference number: 6 (lower is better)
Translates to: DPCSEPLSEASL*DPSGSDSFPEP
Trigger: AGGCTCTGGAAATGAATCGGAACCAGAGGGATCCAACAATGAGGCCTCAGATAGAGGCTCAGAACATGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS CAA 90 bp AGTTCTAGAACAGCCAGTCCAACCAATGCTCCCACGCATTTGGAATaGAGTTCCAGGGCTCTGCTGAATGCCAGACGAGCTTTTTCCAGT +
Preference number: 6 (lower is better)
Translates to: SSRTASPTNAPTHLE*SSRALLNARRAFSS
Trigger: ACTGGAAAAAGCTCGTCTGGCATTCAGCAGAGCCCTGGAACTCAATTCCAAATGCGTGGGAGCATTGGTTGGACTGGCTGTTCTAGAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361367.7
ENST00000524523.1
CDS CAA 90 bp TCTCTGGAGGAACATCGGCCTGCACTTTCTCCTGAAGGATTCGTGTaGCTGTTCCATAGGCTGAAAGGGCACCCTGTATATCAGTCTGTT +
Preference number: 6 (lower is better)
Translates to: SLEEHRPALSPEGFV*LFHRLKGHPVYQSV
Trigger: AACAGACTGATATACAGGGTGCCCTTTCAGCCTATGGAACAGCAACACGAATCCTTCAGGAGAAAGTGCAGGCCGATGTTCCTCCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS CCA 72 bp TTGGATCCCTCTGGTTCCGATTCATTTCCAGAGCCTTaGCCAGAACCCTCATTATCAGATCCTCTCTCCGAT +
Preference number: 6 (lower is better)
Translates to: LDPSGSDSFPEP*PEPSLSDPLSD
Trigger: ATCGGAGAGAGGATCTGATAATGAGGGTTCTGGCCAAGGCTCTGGAAATGAATCGGAACCAGAGGGATCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS CCA 72 bp ACCCATGTTCTGAGCCTCTATCTGAGGCCTCATTGTTaGATCCCTCTGGTTCCGATTCATTTCCAGAGCCTT +
Preference number: 6 (lower is better)
Translates to: THVLSLYLRPHC*IPLVPIHFQSL
Trigger: AAGGCTCTGGAAATGAATCGGAACCAGAGGGATCCAACAATGAGGCCTCAGATAGAGGCTCAGAACATGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS CAA 72 bp GAACATCGGCCTGCACTTTCTCCTGAAGGATTCGTGTaGCTGTTCCATAGGCTGAAAGGGCACCCTGTATAT +
Preference number: 6 (lower is better)
Translates to: EHRPALSPEGFV*LFHRLKGHPVY
Trigger: ATATACAGGGTGCCCTTTCAGCCTATGGAACAGCAACACGAATCCTTCAGGAGAAAGTGCAGGCCGATGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS CAA 72 bp TCTGACCCATGTTCTGAGCCTCTATCTGAGGCCTCATaGTTGGATCCCTCTGGTTCCGATTCATTTCCAGAG +
Preference number: 6 (lower is better)
Translates to: SDPCSEPLSEAS*LDPSGSDSFPE
Trigger: CTCTGGAAATGAATCGGAACCAGAGGGATCCAACAATGAGGCCTCAGATAGAGGCTCAGAACATGGGTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS CAA 90 bp TTGTTGAGTTCTAGAACAGCCAGTCCAACCAATGCTCCCACGCATTaGGAATTGAGTTCCAGGGCTCTGCTGAATGCCAGACGAGCTTTT +
Preference number: 6 (lower is better)
Translates to: LLSSRTASPTNAPTH*ELSSRALLNARRAF
Trigger: AAAAGCTCGTCTGGCATTCAGCAGAGCCCTGGAACTCAATTCCAAATGCGTGGGAGCATTGGTTGGACTGGCTGTTCTAGAACTCAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361367.7
ENST00000524523.1
CDS TCA 72 bp GCAAAGTCTGTTTGCATTCCTGTAACTTGCCACACTTaGAGAGGGCCCGGGCCAAATAGAGTACAACTTCAG +
Preference number: 6 (lower is better)
Translates to: AKSVCIPVTCHT*RGPGPNRVQLQ
Trigger: CTGAAGTTGTACTCTATTTGGCCCGGGCCCTCTTCAAGTGTGGCAAGTTACAGGAATGCAAACAGACTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS CAA 72 bp TCTGAGTACTTGTTTGTAGATGGCCAGAGCACGATCTaGATGACGCTTTTCCTTTTCTCGATCTCGGGTGGG +
Preference number: 6 (lower is better)
Translates to: SEYLFVDGQSTI*MTLFLFSISGG
Trigger: CCCACCCGAGATCGAGAAAAGGAAAAGCGTCATCAAGATCGTGCTCTGGCCATCTACAAACAAGTACTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361367.7
ENST00000526874.5
ENST00000529355.1
CDS CAA 72 bp CATTTCTTTCGTTGTTCGTCCTCGTCTGAGTCACTGTaGCTGTTGCTGTTCCTGGGATGTCCTTCATCAGCA +
Preference number: 6 (lower is better)
Translates to: HFFRCSSSSESL*LLLFLGCPSSA
Trigger: TGCTGATGAAGGACATCCCAGGAACAGCAACAGCAACAGTGACTCAGACGAGGACGAACAACGAAAGAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS CCA 72 bp CAGCTCTCTGCTTGCATAGCTTCCACTTCTGTATTATaGAATGCATGGAGGGCCAGATGCTGGACTTTACTA +
Preference number: 6 (lower is better)
Translates to: QLSACIASTSVL*NAWRARCWTLL
Trigger: TAGTAAAGTCCAGCATCTGGCCCTCCATGCATTCCATAATACAGAAGTGGAAGCTATGCAAGCAGAGAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361367.7
ENST00000524523.1
CDS CCA 72 bp TCTAAAATGGAGGGCACCCACATTATTGAGAATCTCTaGAGGAACATCGGCCTGCACTTTCTCCTGAAGGAT +
Preference number: 6 (lower is better)
Translates to: SKMEGTHIIENL*RNIGLHFLLKD
Trigger: ATCCTTCAGGAGAAAGTGCAGGCCGATGTTCCTCCAGAGATTCTCAATAATGTGGGTGCCCTCCATTTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS CAA 72 bp AGGTTTCCAAGTCTAAAATGGAGGGCACCCACATTATaGAGAATCTCTGGAGGAACATCGGCCTGCACTTTC +
Preference number: 6 (lower is better)
Translates to: RFPSLKWRAPTL*RISGGTSACTF
Trigger: GAAAGTGCAGGCCGATGTTCCTCCAGAGATTCTCAATAATGTGGGTGCCCTCCATTTTAGACTTGGAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS CAA 72 bp TGGGCAAATACATCACGAGCTTCACGAAAATATCCTTaGTGGGCCAAAACAGCTCCTATGCCATTGGCAGCA +
Preference number: 6 (lower is better)
Translates to: WANTSRASRKYP*WAKTAPMPLAA
Trigger: TGCTGCCAATGGCATAGGAGCTGTTTTGGCCCACAAAGGATATTTTCGTGAAGCTCGTGATGTATTTGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361367.7
ENST00000526874.5
ENST00000529355.1
CDS CAA 90 bp GATGAGGCACATTTCTTTCGTTGTTCGTCCTCGTCTGAGTCACTGTaGCTGTTGCTGTTCCTGGGATGTCCTTCATCAGCAATTTTAAGT +
Preference number: 6 (lower is better)
Translates to: DEAHFFRCSSSSESL*LLLFLGCPSSAILS
Trigger: ACTTAAAATTGCTGATGAAGGACATCCCAGGAACAGCAACAGCAACAGTGACTCAGACGAGGACGAACAACGAAAGAAATGTGCCTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS TCA 72 bp ACTTTCGGAGGCAGTTTTCATACATCTGAACGGCGCTaGTGTACTGCTTTTGCTCCACATAGATGTGTGCTA +
Preference number: 6 (lower is better)
Translates to: TFGGSFHTSERR*CTAFAPHRCVL
Trigger: TAGCACACATCTATGTGGAGCAAAAGCAGTACATCAGCGCCGTTCAGATGTATGAAAACTGCCTCCGAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS GCA 72 bp ACGAACTTCCGCTGGACATCCTGGGTTAGTACGCAATaGTTTCTTATAGTAAGCAAGAGCTCCTCTGTAATC +
Preference number: 6 (lower is better)
Translates to: TNFRWTSWVSTQ*FLIVSKSSSVI
Trigger: GATTACAGAGGAGCTCTTGCTTACTATAAGAAAGCATTGCGTACTAACCCAGGATGTCCAGCGGAAGTTCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361367.7
ENST00000524523.1
CDS CAA 72 bp GAGGGCCCGGGCCAAATAGAGTACAACTTCAGTGTTTaGGTGCTTATAGAACTTTCGGAGGCAGTTTTCATA +
Preference number: 6 (lower is better)
Translates to: EGPGQIEYNFSV*VLIELSEAVFI
Trigger: TATGAAAACTGCCTCCGAAAGTTCTATAAGCACCAAAACACTGAAGTTGTACTCTATTTGGCCCGGGCCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS TCA 72 bp CAATCCAAGCTTCAACATCATCGGGATACTGTTCTGTaGCCTTCTTCAAATGGCCCTTGGCAATATCTCGTT +
Preference number: 6 (lower is better)
Translates to: QSKLQHHRDTVL*PSSNGPWQYLV
Trigger: AACGAGATATTGCCAAGGGCCATTTGAAGAAGGTCACAGAACAGTATCCCGATGATGTTGAAGCTTGGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS GCA 72 bp CTCTGCTTGCATAGCTTCCACTTCTGTATTATGGAATaGATGGAGGGCCAGATGCTGGACTTTACTATAATC +
Preference number: 6 (lower is better)
Translates to: LCLHSFHFCIME*MEGQMLDFTII
Trigger: GATTATAGTAAAGTCCAGCATCTGGCCCTCCATGCATTCCATAATACAGAAGTGGAAGCTATGCAAGCAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361367.7
ENST00000524523.1
CDS GCA 72 bp CTCAAACTTCTTCTGCCCAGGACCCCATTCTTGTTTTaGCAAATGAAGATTGCCAATCAAAGACCAAGCATC +
Preference number: 6 (lower is better)
Translates to: LKLLLPRTPFLF*QMKIANQRPSI
Trigger: GATGCTTGGTCTTTGATTGGCAATCTTCATTTGGCAAAACAAGAATGGGGTCCTGGGCAGAAGAAGTTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361367.7
ENST00000526874.5
ENST00000529355.1
CDS GCA 72 bp CTGAGACGTTTCTCTTCCTGTTCTTTAAGAAGTTTCTaGCTTAACAGCTCCTTTTCTTGCTCTTGCTTGGCC +
Preference number: 6 (lower is better)
Translates to: LRRFSSCSLRSF*LNSSFSCSCLA
Trigger: GGCCAAGCAAGAGCAAGAAAAGGAGCTGTTAAGGCAGAAACTTCTTAAAGAACAGGAAGAGAAACGTCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361367.7
ENST00000529898.1
CDS CCA 72 bp TATTTCTTAGCCTCCCCTAGGTTTCCAAGTCTAAAATaGAGGGCACCCACATTATTGAGAATCTCTGGAGGA +
Preference number: 6 (lower is better)
Translates to: YFLASPRFPSLK*RAPTLLRISGG
Trigger: TCCTCCAGAGATTCTCAATAATGTGGGTGCCCTCCATTTTAGACTTGGAAACCTAGGGGAGGCTAAGAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS CAA 90 bp TCCTTGCTTGTAGTATTCCAGCGCCAAAGCAATCCATATGTGCAGTaGTGTGTGTTCCTGTTTCAGAATACTGATAACTTCATCTCCCTC +
Preference number: 6 (lower is better)
Translates to: SLLVVFQRQSNPYVQ*CVFLFQNTDNFISL
Trigger: GAGGGAGATGAAGTTATCAGTATTCTGAAACAGGAACACACACAACTGCACATATGGATTGCTTTGGCGCTGGAATACTACAAGCAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361367.7
ENST00000524523.1
CDS TCA 72 bp ATGGCCCTTGGCAATATCTCGTTTTTCTTGATCTTCTaGGGCAGCATAGAGAGAGCCGAGAATTTTCATAGT +
Preference number: 6 (lower is better)
Translates to: MALGNISFFLIF*GSIERAENFHS
Trigger: ACTATGAAAATTCTCGGCTCTCTCTATGCTGCCTCAGAAGATCAAGAAAAACGAGATATTGCCAAGGGCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS GCA 72 bp AACAGCTCCTATGCCATTGGCAGCATACAGATTCTTTaGATCATTTCTGAGTACTTGTTTGTAGATGGCCAG +
Preference number: 6 (lower is better)
Translates to: NSSYAIGSIQIL*IISEYLFVDGQ
Trigger: CTGGCCATCTACAAACAAGTACTCAGAAATGATGCAAAGAATCTGTATGCTGCCAATGGCATAGGAGCTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361367.7
ENST00000526874.5
ENST00000529355.1
CDS CAA 72 bp TATCCTCTCAAACTTCTTCTGCCCAGGACCCCATTCTaGTTTTGCCAAATGAAGATTGCCAATCAAAGACCA +
Preference number: 6 (lower is better)
Translates to: YPLKLLLPRTPF*FCQMKIANQRP
Trigger: TGGTCTTTGATTGGCAATCTTCATTTGGCAAAACAAGAATGGGGTCCTGGGCAGAAGAAGTTTGAGAGGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361367.7
ENST00000526874.5
ENST00000529355.1
CDS CAA 90 bp TATGCCATTGGCAGCATACAGATTCTTTGCATCATTTCTGAGTACTaGTTTGTAGATGGCCAGAGCACGATCTTGATGACGCTTTTCCTT +
Preference number: 6 (lower is better)
Translates to: YAIGSIQILCIISEY*FVDGQSTILMTLFL
Trigger: AAGGAAAAGCGTCATCAAGATCGTGCTCTGGCCATCTACAAACAAGTACTCAGAAATGATGCAAAGAATCTGTATGCTGCCAATGGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361367.7
ENST00000526874.5
ENST00000529355.1
CDS CAA 72 bp GTAGTATTCCAGCGCCAAAGCAATCCATATGTGCAGTaGTGTGTGTTCCTGTTTCAGAATACTGATAACTTC +
Preference number: 6 (lower is better)
Translates to: VVFQRQSNPYVQ*CVFLFQNTDNF
Trigger: GAAGTTATCAGTATTCTGAAACAGGAACACACACAACTGCACATATGGATTGCTTTGGCGCTGGAATACTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361367.7
ENST00000524523.1
CDS CAA 72 bp CCACACATCACTAATATCTGCTGTTGCTTCTCTTACTaGGGCAAATACATCACGAGCTTCACGAAAATATCC +
Preference number: 6 (lower is better)
Translates to: PHITNICCCFSY*GKYITSFTKIS
Trigger: GGATATTTTCGTGAAGCTCGTGATGTATTTGCCCAAGTAAGAGAAGCAACAGCAGATATTAGTGATGTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361367.7
ENST00000526874.5
ENST00000529355.1
CDS GCA 72 bp ATTCTTTTCTTTCCGAGCCTGTTGTACATAATACGCTaGCAATGTATCCAAGCAAGTCATCTGGTCTTTTTC +
Preference number: 6 (lower is better)
Translates to: ILFFPSLLYIIR*QCIQASHLVFF
Trigger: GAAAAAGACCAGATGACTTGCTTGGATACATTGGCAGCGTATTATGTACAACAGGCTCGGAAAGAAAAGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361367.7
ENST00000524523.1
CDS CCA 72 bp CACACATCACTAATATCTGCTGTTGCTTCTCTTACTTaGGCAAATACATCACGAGCTTCACGAAAATATCCT +
Preference number: 6 (lower is better)
Translates to: HTSLISAVASLT*ANTSRASRKYP
Trigger: AGGATATTTTCGTGAAGCTCGTGATGTATTTGCCCAAGTAAGAGAAGCAACAGCAGATATTAGTGATGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361367.7
ENST00000526874.5
ENST00000529355.1
CDS CAA 72 bp TTTCTGTTTCATCATCATCAGATCCTTCTTCTCCCTTaGGATGTCTTCTCCTCTTTTTCTTCTTTCTCTCAC +
Preference number: 6 (lower is better)
Translates to: FLFHHHQILLLP*DVFSSFSSFSH
Trigger: GTGAGAGAAAGAAGAAAAAGAGGAGAAGACATCCAAAGGGAGAAGAAGGATCTGATGATGATGAAACAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361367.7
CDS TCA 72 bp ACAGAGATCAATCATCTTCCCACAATAGCTGATTACTaGAGAGGTTTACAAACTATATTACAACAGTGGTTT +
Preference number: 6 (lower is better)
Translates to: TEINHLPTIADY*RGLQTILQQWF
Trigger: AAACCACTGTTGTAATATAGTTTGTAAACCTCTTCAGTAATCAGCTATTGTGGGAAGATGATTGATCTCTGT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529355.1