RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CTNND2 (Homo sapiens)

Ensembl gene IDs: ENSG00000169862

Ensembl transcript IDs: ENST00000304623.13, ENST00000458100.6, ENST00000495388.6, ENST00000502551.5, ENST00000503622.5, ENST00000504354.5, ENST00000504499.5, ENST00000506324.1, ENST00000506735.1, ENST00000507430.1, ENST00000508761.1, ENST00000509868.1, ENST00000511278.5, ENST00000511377.5, ENST00000513588.5, ENST00000513598.5, ENST00000514132.1

Found 1271 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCGGCATAGCTGGCCCTCTGGAAGGTGGCCGCGGCGGCATTCTGTaGGCCGTGCTGGCTGCCTGTGCGCTGCAAGGGGACGGAGTCGAC +
Preference number: 1 (lower is better)
Translates to: GGIAGPLEGGRGGIL*AVLAACALQGDGVD
Trigger: GTCGACTCCGTCCCCTTGCAGCGCACAGGCAGCCAGCACGGCCCACAGAATGCCGCCGCGGCCACCTTCCAGAGGGCCAGCTATGCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR CCA 90 bp CTGGCCCTCTGGAAGGTGGCCGCGGCGGCATTCTGTGGGCCGTGCTaGCTGCCTGTGCGCTGCAAGGGGACGGAGTCGACACCAGGGGAA +
Preference number: 1 (lower is better)
Translates to: LALWKVAAAAFCGPC*LPVRCKGTESTPGE
Trigger: TTCCCCTGGTGTCGACTCCGTCCCCTTGCAGCGCACAGGCAGCCAGCACGGCCCACAGAATGCCGCCGCGGCCACCTTCCAGAGGGCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR CCA 90 bp CGTAATTGGAGGCTGGGCCGGCGGCATAGCTGGCCCTCTGGAAGGTaGCCGCGGCGGCATTCTGTGGGCCGTGCTGGCTGCCTGTGCGCT +
Preference number: 1 (lower is better)
Translates to: RNWRLGRRHSWPSGR*PRRHSVGRAGCLCA
Trigger: AGCGCACAGGCAGCCAGCACGGCCCACAGAATGCCGCCGCGGCCACCTTCCAGAGGGCCAGCTATGCCGCCGGCCCAGCCTCCAATTACG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR CCA 90 bp GTCGGTAGGGGTCCGCGTAATTGGAGGCTGGGCCGGCGGCATAGCTaGCCCTCTGGAAGGTGGCCGCGGCGGCATTCTGTGGGCCGTGCT +
Preference number: 1 (lower is better)
Translates to: VGRGPRNWRLGRRHS*PSGRWPRRHSVGRA
Trigger: AGCACGGCCCACAGAATGCCGCCGCGGCCACCTTCCAGAGGGCCAGCTATGCCGCCGGCCCAGCCTCCAATTACGCGGACCCCTACCGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR GCA 90 bp CCCTCTGGAAGGTGGCCGCGGCGGCATTCTGTGGGCCGTGCTGGCTaGCTGTGCGCTGCAAGGGGACGGAGTCGACACCAGGGGAAGATG +
Preference number: 1 (lower is better)
Translates to: PSGRWPRRHSVGRAG*LCAARGRSRHQGKM
Trigger: CATCTTCCCCTGGTGTCGACTCCGTCCCCTTGCAGCGCACAGGCAGCCAGCACGGCCCACAGAATGCCGCCGCGGCCACCTTCCAGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR CCA 90 bp GGGACAATACTGCAGCTGTCGGTAGGGGTCCGCGTAATTGGAGGCTaGGCCGGCGGCATAGCTGGCCCTCTGGAAGGTGGCCGCGGCGGC +
Preference number: 1 (lower is better)
Translates to: GTILQLSVGVRVIGG*AGGIAGPLEGGRGG
Trigger: GCCGCCGCGGCCACCTTCCAGAGGGCCAGCTATGCCGCCGGCCCAGCCTCCAATTACGCGGACCCCTACCGACAGCTGCAGTATTGTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR CCA 90 bp GGGCACTTGCTGAGCGGTTGTTGGGAGACACGCGCACAGGGGAGATaGAGGGCGTGCGGGAGGAGGAGTAGGGCCTTTGCCGGTCCCTCT +
Preference number: 1 (lower is better)
Translates to: GHLLSGCWETRAQGR*RACGRRSRAFAGPS
Trigger: AGAGGGACCGGCAAAGGCCCTACTCCTCCTCCCGCACGCCCTCCATCTCCCCTGTGCGCGTGTCTCCCAACAACCGCTCAGCAAGTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR GCA 90 bp CCTTGCCATTGGCCTCGCCACAGAGTAGCCCGTCCAGCTCGTCCGTaGCCATGTGCTGTCCCTGAGACGTTTCTGCCGCCAGCCGGTACG +
Preference number: 1 (lower is better)
Translates to: PCHWPRHRVARPARP*PCAVPETFLPPAGT
Trigger: CGTACCGGCTGGCGGCAGAAACGTCTCAGGGACAGCACATGGGCACGGACGAGCTGGACGGGCTACTCTGTGGCGAGGCCAATGGCAAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR GCA 90 bp TTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTaGTCCTCACACCCAGGAGTCGGGGGAGGCCGGGTAGTGGCTCGT +
Preference number: 1 (lower is better)
Translates to: LWYACTCTVPGAPVP*SSHPGVGGGRVVAR
Trigger: ACGAGCCACTACCCGGCCTCCCCCGACTCCTGGGTGTGAGGAGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
3UTR CCA 90 bp CAACAGAGGGACAATACTGCAGCTGTCGGTAGGGGTCCGCGTAATTaGAGGCTGGGCCGGCGGCATAGCTGGCCCTCTGGAAGGTGGCCG +
Preference number: 1 (lower is better)
Translates to: QQRDNTAAVGRGPRN*RLGRRHSWPSGRWP
Trigger: CGGCCACCTTCCAGAGGGCCAGCTATGCCGCCGGCCCAGCCTCCAATTACGCGGACCCCTACCGACAGCTGCAGTATTGTCCCTCTGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR TCA 90 bp AGGGACGGGCAGCTGAGTAGAAGTCAACGTAGTTGCCGGTGGACTTaGGACCCAGGTGCATGGTGTACTCGCTGGCGGGAGGGCGATGGT +
Preference number: 1 (lower is better)
Translates to: RDGQLSRSQRSCRWT*DPGAWCTRWREGDG
Trigger: ACCATCGCCCTCCCGCCAGCGAGTACACCATGCACCTGGGTCTCAAGTCCACCGGCAACTACGTTGACTTCTACTCAGCTGCCCGTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
3UTR CCA 90 bp TCTTCTTCTTGCCCCAGCACCCAGAGCTCTCAGCATCCTTGCCATTaGCCTCGCCACAGAGTAGCCCGTCCAGCTCGTCCGTGCCCATGT +
Preference number: 1 (lower is better)
Translates to: SSSCPSTQSSQHPCH*PRHRVARPARPCPC
Trigger: ACATGGGCACGGACGAGCTGGACGGGCTACTCTGTGGCGAGGCCAATGGCAAGGATGCTGAGAGCTCTGGGTGCTGGGGCAAGAAGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR TCA 90 bp CCACAGAGTAGCCCGTCCAGCTCGTCCGTGCCCATGTGCTGTCCCTaGGACGTTTCTGCCGCCAGCCGGTACGAGAGGTTCCTTAAAATG +
Preference number: 1 (lower is better)
Translates to: PQSSPSSSSVPMCCP*DVSAASRYERFLKM
Trigger: CATTTTAAGGAACCTCTCGTACCGGCTGGCGGCAGAAACGTCTCAGGGACAGCACATGGGCACGGACGAGCTGGACGGGCTACTCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR GCA 90 bp GGGACCTGGCCAAGGTGCCTTCAGGCGGGAGAGCAGGGCCGGATTTaGTGTATGGAGACTCAACAGAGGGACAATACTGCAGCTGTCGGT +
Preference number: 1 (lower is better)
Translates to: GTWPRCLQAGEQGRI*CMETQQRDNTAAVG
Trigger: ACCGACAGCTGCAGTATTGTCCCTCTGTTGAGTCTCCATACAGCAAATCCGGCCCTGCTCTCCCGCCTGAAGGCACCTTGGCCAGGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR GCA 90 bp GCTCGGATATATACTGACCACTTCCAGCTCCCTGCAGCCAAGTTCTaGAGGGCGCCTGCCGCCCCTTCCAGCGTGTCTGGATTTGAGCAC +
Preference number: 1 (lower is better)
Translates to: ARIYTDHFQLPAAKF*RAPAAPSSVSGFEH
Trigger: GTGCTCAAATCCAGACACGCTGGAAGGGGCGGCAGGCGCCCTGCAGAACTTGGCTGCAGGGAGCTGGAAGTGGTCAGTATATATCCGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR CCA 90 bp GGCCAAGGTGCCTTCAGGCGGGAGAGCAGGGCCGGATTTGCTGTATaGAGACTCAACAGAGGGACAATACTGCAGCTGTCGGTAGGGGTC +
Preference number: 1 (lower is better)
Translates to: GQGAFRRESRAGFAV*RLNRGTILQLSVGV
Trigger: GACCCCTACCGACAGCTGCAGTATTGTCCCTCTGTTGAGTCTCCATACAGCAAATCCGGCCCTGCTCTCCCGCCTGAAGGCACCTTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR CCA 90 bp AGGGCGTGCGGGAGGAGGAGTAGGGCCTTTGCCGGTCCCTCTCGATaGTTGAAGACGAGGCTACAAAGTGGTATTGTGACCATCCATCCT +
Preference number: 1 (lower is better)
Translates to: RACGRRSRAFAGPSR*LKTRLQSGIVTIHP
Trigger: AGGATGGATGGTCACAATACCACTTTGTAGCCTCGTCTTCAACCATCGAGAGGGACCGGCAAAGGCCCTACTCCTCCTCCCGCACGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR GCA 90 bp CAGCTGTCACTGTGTCATCCGACATGGCCTTGCTTGCAGTGTTGTTaGTGTTGTTCCCTCCTGGAAGCCTGTGGACTAGGTCTCGCATGG +
Preference number: 1 (lower is better)
Translates to: QLSLCHPTWPCLQCC*CCSLLEACGLGLAW
Trigger: CCATGCGAGACCTAGTCCACAGGCTTCCAGGAGGGAACAACAGCAACAACACTGCAAGCAAGGCCATGTCGGATGACACAGTGACAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR GCA 90 bp GCAGTGTGCAGCAGACAGCTGTCACTGTGTCATCCGACATGGCCTTaGTTGCAGTGTTGTTGCTGTTGTTCCCTCCTGGAAGCCTGTGGA +
Preference number: 1 (lower is better)
Translates to: AVCSRQLSLCHPTWP*LQCCCCCSLLEACG
Trigger: TCCACAGGCTTCCAGGAGGGAACAACAGCAACAACACTGCAAGCAAGGCCATGTCGGATGACACAGTGACAGCTGTCTGCTGCACACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR CCA 90 bp CTTCGTGCAGTGTGCAGCAGACAGCTGTCACTGTGTCATCCGACATaGCCTTGCTTGCAGTGTTGTTGCTGTTGTTCCCTCCTGGAAGCC +
Preference number: 1 (lower is better)
Translates to: LRAVCSRQLSLCHPT*PCLQCCCCCSLLEA
Trigger: GGCTTCCAGGAGGGAACAACAGCAACAACACTGCAAGCAAGGCCATGTCGGATGACACAGTGACAGCTGTCTGCTGCACACTGCACGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR TCA 90 bp GTAGTGGCTCGTTTCATAGTTCAGTTCACTGTAGGGACGGGCAGCTaGGTAGAAGTCAACGTAGTTGCCGGTGGACTTGAGACCCAGGTG +
Preference number: 1 (lower is better)
Translates to: VVARFIVQFTVGTGS*VEVNVVAGGLETQV
Trigger: CACCTGGGTCTCAAGTCCACCGGCAACTACGTTGACTTCTACTCAGCTGCCCGTCCCTACAGTGAACTGAACTATGAAACGAGCCACTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
3UTR CCA 90 bp TTTTCAACGGTCTTGCTATCGATCTCACTGCTCCCCAGCGCAGACTaGATCACGTACAGCAAGGCATCCGTAAGCCCATCACACTCTCTC +
Preference number: 1 (lower is better)
Translates to: FSTVLLSISLLPSAD*ITYSKASVSPSHSL
Trigger: GAGAGAGTGTGATGGGCTTACGGATGCCTTGCTGTACGTGATCCAGTCTGCGCTGGGGAGCAGTGAGATCGATAGCAAGACCGTTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR GCA 90 bp TGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATaGCTCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGCACTT +
Preference number: 1 (lower is better)
Translates to: CVLCLTITLTPHRPE*LVSPPINHVQYKAL
Trigger: AAGTGCTTTATACTGAACGTGGTTGATGGGAGGAGAGACGAGGCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
3UTR GCA 90 bp CCTGAGACGTTTCTGCCGCCAGCCGGTACGAGAGGTTCCTTAAAATaGACACACAGTTTTCAACGGTCTTGCTATCGATCTCACTGCTCC +
Preference number: 1 (lower is better)
Translates to: PETFLPPAGTRGSLK*THSFQRSCYRSHCS
Trigger: GGAGCAGTGAGATCGATAGCAAGACCGTTGAAAACTGTGTGTGCATTTTAAGGAACCTCTCGTACCGGCTGGCGGCAGAAACGTCTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR GCA 90 bp AGTGTTTATCTCCTTTGCTTTTGGAGATGCCGACCAACTTCTCGATaGCACCGGCATCCCGTAAGGCCTTGGCGTTCTCCATGTTCTTGG +
Preference number: 1 (lower is better)
Translates to: SVYLLCFWRCRPTSR*HRHPVRPWRSPCSW
Trigger: CCAAGAACATGGAGAACGCCAAGGCCTTACGGGATGCCGGTGGCATCGAGAAGTTGGTCGGCATCTCCAAAAGCAAAGGAGATAAACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR CCA 90 bp GAGTGGGGGATAATCACCGCGTTGGTCAGTACTGCTAGGGCATCCTaGATGATTGGCATTTTGAGTGCATCGCATGAGGAGAGGTTCCAA +
Preference number: 1 (lower is better)
Translates to: EWGIITALVSTARAS*MIGILSASHEERFQ
Trigger: TTGGAACCTCTCCTCATGCGATGCACTCAAAATGCCAATCATCCAGGATGCCCTAGCAGTACTGACCAACGCGGTGATTATCCCCCACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR GCA 90 bp TCTCCAGGTCAGTCGTCTTGCGGAGTAACCTCACCAGTGCTGGGATaGCACCACAGTTTTTCAGGGCAATTTTGTTATCATCGTTGGCCT +
Preference number: 1 (lower is better)
Translates to: SPGQSSCGVTSPVLG*HHSFSGQFCYHRWP
Trigger: AGGCCAACGATGATAACAAAATTGCCCTGAAAAACTGTGGTGGCATCCCAGCACTGGTGAGGTTACTCCGCAAGACGACTGACCTGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR GCA 90 bp TTCTTGTGGAATTCTGAAATGGCTGGTAGGTCTCGTAATCTTTTCTaGTGGGCTCCTGTGGGACTGGCTGTGCTGAAACCTGGTTGTGTT +
Preference number: 1 (lower is better)
Translates to: FLWNSEMAGRSRNLF*WAPVGLAVLKPGCV
Trigger: AACACAACCAGGTTTCAGCACAGCCAGTCCCACAGGAGCCCAGCAGAAAAGATTACGAGACCTACCAGCCATTTCAGAATTCCACAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
3UTR CCA 90 bp GTCCTCGAAGAAGGACTCATCGTAATTTCTTGTGGAATTCTGAAATaGCTGGTAGGTCTCGTAATCTTTTCTGCTGGGCTCCTGTGGGAC +
Preference number: 1 (lower is better)
Translates to: VLEEGLIVISCGILK*LVGLVIFSAGLLWD
Trigger: GTCCCACAGGAGCCCAGCAGAAAAGATTACGAGACCTACCAGCCATTTCAGAATTCCACAAGAAATTACGATGAGTCCTTCTTCGAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
3UTR CCA 90 bp GATGGTGGACCTGGTCCTCGAAGAAGGACTCATCGTAATTTCTTGTaGAATTCTGAAATGGCTGGTAGGTCTCGTAATCTTTTCTGCTGG +
Preference number: 1 (lower is better)
Translates to: DGGPGPRRRTHRNFL*NSEMAGRSRNLFCW
Trigger: CCAGCAGAAAAGATTACGAGACCTACCAGCCATTTCAGAATTCCACAAGAAATTACGATGAGTCCTTCTTCGAGGACCAGGTCCACCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
3UTR GCA 90 bp ATTAACAAAAGGCAAGAAACATCTTGCTGTACAGAGGAACCCCAATaGAACCTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAA +
Preference number: 1 (lower is better)
Translates to: INKRQETSCCTEEPQ*NLKPRVTTDEESKQ
Trigger: TTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTGCCTTTTGTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
3UTR-3UTR GCA 90 bp TTGCTGAGCGGTTGTTGGGAGACACGCGCACAGGGGAGATGGAGGGCGTGCGGGCCTGCAGCCAAGTTCTaGAGGGCGCCTGCCGCCCCT +
Preference number: 2 (lower is better)
Translates to: LLSGCWETRAQGRWRACGPAAKF*RAPAAP
Trigger: AGGGGCGGCAGGCGCCCTGCAGAACTTGGCTGCAGG...CCCGCACGCCCTCCATCTCCCCTGTGCGCGTGTCTCCCAACAACCGCTCAGCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR-3UTR TCA 90 bp CCAGGTGCATGGTGTACTCGCTGGCGGGAGGGCGATGGTGGACCTGGTCCTCGACCCATGTGCTGTCCCTaGGACGTTTCTGCCGCCAGC +
Preference number: 2 (lower is better)
Translates to: PGAWCTRWREGDGGPGPRPMCCP*DVSAAS
Trigger: GCTGGCGGCAGAAACGTCTCAGGGACAGCACATGGG...TCGAGGACCAGGTCCACCATCGCCCTCCCGCCAGCGAGTACACCATGCACCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR-3UTR GCA 90 bp TTGCTGAGCGGTTGTTGGGAGACACGCGCACAGGGGAGATGGAGGGCGTGCGGGTGGCTGCCTGTGCGCTaGAAGGGGACGGAGTCGACA +
Preference number: 2 (lower is better)
Translates to: LLSGCWETRAQGRWRACGWLPVR*KGTEST
Trigger: TGTCGACTCCGTCCCCTTGCAGCGCACAGGCAGCCA...CCCGCACGCCCTCCATCTCCCCTGTGCGCGTGTCTCCCAACAACCGCTCAGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR-3UTR CCA 90 bp TCACACCCAGGAGTCGGGGGAGGCCGGGTAGTGGCTCGTTTCATAGTTCAGTTCCGCGCACAGGGGAGATaGAGGGCGTGCGGGAGGAGG +
Preference number: 2 (lower is better)
Translates to: SHPGVGGGRVVARFIVQFRAQGR*RACGRR
Trigger: CCTCCTCCCGCACGCCCTCCATCTCCCCTGTGCGCG...GAACTGAACTATGAAACGAGCCACTACCCGGCCTCCCCCGACTCCTGGGTGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR CAA 90 bp GCCATGTTCCGCAGCGCAGTGGCCACCGCGCACACCACACGGTCATaGTCTATTCGGAGCAGCTCCACGAGGATGGGCAGGCCTTTCTCT +
Preference number: 2 (lower is better)
Translates to: AMFRSAVATAHTTRS*SIRSSSTRMGRPFS
Trigger: AGAGAAAGGCCTGCCCATCCTCGTGGAGCTGCTCCGAATAGACAATGACCGTGTGGTGTGCGCGGTGGCCACTGCGCTGCGGAACATGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR-3UTR GCA 90 bp TCACACCCAGGAGTCGGGGGAGGCCGGGTAGTGGCTCGTTTCATAGTTCAGTTCCCCCACCGGCCCGAATaGCTCGTCTCTCCTCCCATC +
Preference number: 2 (lower is better)
Translates to: SHPGVGGGRVVARFIVQFPHRPE*LVSPPI
Trigger: GATGGGAGGAGAGACGAGGCATTCGGGCCGGTGGGG...GAACTGAACTATGAAACGAGCCACTACCCGGCCTCCCCCGACTCCTGGGTGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000513588.5
3UTR CAA 90 bp GGGGACCTGGCCAAGGTGCCTTCAGGCGGGAGAGCAGGGCCGGATTaGCTGTATGGAGACTCAACAGAGGGACAATACTGCAGCTGTCGG +
Preference number: 2 (lower is better)
Translates to: GDLAKVPSGGRAGPD*LYGDSTEGQYCSCR
Trigger: CCGACAGCTGCAGTATTGTCCCTCTGTTGAGTCTCCATACAGCAAATCCGGCCCTGCTCTCCCGCCTGAAGGCACCTTGGCCAGGTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR-3UTR TCA 90 bp GGACTTGAGACCCAGGTGCATGGTGTACTCGCTGGCGGGAGGGCGATGGTGGACAGAGTAAACAAAGCGTaGGAAGCCGTCCCCCACACA +
Preference number: 2 (lower is better)
Translates to: GLETQVHGVLAGGRAMVDRVNKA*EAVPHT
Trigger: TGTGTGGGGGACGGCTTCTCACGCTTTGTTTACTCT...GTCCACCATCGCCCTCCCGCCAGCGAGTACACCATGCACCTGGGTCTCAAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513588.5
3UTR-3UTR CCA 90 bp GTTCACTGTAGGGACGGGCAGCTGAGTAGAAGTCAACGTAGTTGCCGGTGGACTAGGGGTCCGCGTAATTaGAGGCTGGGCCGGCGGCAT +
Preference number: 2 (lower is better)
Translates to: VHCRDGQLSRSQRSCRWTRGPRN*RLGRRH
Trigger: ATGCCGCCGGCCCAGCCTCCAATTACGCGGACCCCT...AGTCCACCGGCAACTACGTTGACTTCTACTCAGCTGCCCGTCCCTACAGTGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR-3UTR GCA 90 bp TTTGCCGATGAGCTCCTTATTTCTGACGTCCAAGGCCATGTTCCGCAGCGCAGTGGGACCTGGCCAAGGTaGCTTCAGGCGGGAGAGCAG +
Preference number: 2 (lower is better)
Translates to: FADELLISDVQGHVPQRSGTWPR*LQAGEQ
Trigger: CTGCTCTCCCGCCTGAAGGCACCTTGGCCAGGTCCC...ACTGCGCTGCGGAACATGGCCTTGGACGTCAGAAATAAGGAGCTCATCGGCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR-3UTR GCA 90 bp AGGCCGGGTAGTGGCTCGTTTCATAGTTCAGTTCACTGTAGGGACGGGCAGCTGGGTAGGTGGCGTTGCTaGCGGTGCACTCGTAGTCTG +
Preference number: 2 (lower is better)
Translates to: RPGSGSFHSSVHCRDGQLGRWRC*RCTRSL
Trigger: CAGACTACGAGTGCACCGGCAGCAACGCCACCTACC...CAGCTGCCCGTCCCTACAGTGAACTGAACTATGAAACGAGCCACTACCCGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR-3UTR CCA 90 bp TGTCATGGCATCTTTCCTGGAAGTGTGTTCGCCTTTAGCTCCGTGGTAGGTGGCTGGCCCTCTGGAAGGTaGCCGCGGCGGCATTCTGTG +
Preference number: 2 (lower is better)
Translates to: CHGIFPGSVFAFSSVVGGWPSGR*PRRHSV
Trigger: CACAGAATGCCGCCGCGGCCACCTTCCAGAGGGCCA...GCCACCTACCACGGAGCTAAAGGCGAACACACTTCCAGGAAAGATGCCATGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR-3UTR CCA 90 bp TGTCATGGCATCTTTCCTGGAAGTGTGTTCGCCTTTAGCTCCGTGGTAGGTGGCTGTTCCGCAGCGCAGTaGCCACCGCGCACACCACAC +
Preference number: 2 (lower is better)
Translates to: CHGIFPGSVFAFSSVVGGCSAAQ*PPRTPH
Trigger: GTGTGGTGTGCGCGGTGGCCACTGCGCTGCGGAACA...GCCACCTACCACGGAGCTAAAGGCGAACACACTTCCAGGAAAGATGCCATGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR CAA 90 bp TTTTTCTTCTTCTTCTTGCCCCAGCACCCAGAGCTCTCAGCATCCTaGCCATTGGCCTCGCCACAGAGTAGCCCGTCCAGCTCGTCCGTG +
Preference number: 2 (lower is better)
Translates to: FFFFFLPQHPELSAS*PLASPQSSPSSSSV
Trigger: CACGGACGAGCTGGACGGGCTACTCTGTGGCGAGGCCAATGGCAAGGATGCTGAGAGCTCTGGGTGCTGGGGCAAGAAGAAGAAGAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR CAA 90 bp CAAAGGACTCCTGTGACCAGCTCCCGGATCTCCAGGTCAGTCGTCTaGCGGAGTAACCTCACCAGTGCTGGGATGCCACCACAGTTTTTC +
Preference number: 2 (lower is better)
Translates to: QRTPVTSSRISRSVV*RSNLTSAGMPPQFF
Trigger: GAAAAACTGTGGTGGCATCCCAGCACTGGTGAGGTTACTCCGCAAGACGACTGACCTGGAGATCCGGGAGCTGGTCACAGGAGTCCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR CAA 90 bp CAGACAGCTGTCACTGTGTCATCCGACATGGCCTTGCTTGCAGTGTaGTTGCTGTTGTTCCCTCCTGGAAGCCTGTGGACTAGGTCTCGC +
Preference number: 2 (lower is better)
Translates to: QTAVTVSSDMALLAV*LLLFPPGSLWTRSR
Trigger: GCGAGACCTAGTCCACAGGCTTCCAGGAGGGAACAACAGCAACAACACTGCAAGCAAGGCCATGTCGGATGACACAGTGACAGCTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR CAA 90 bp TGCAGTGTGCAGCAGACAGCTGTCACTGTGTCATCCGACATGGCCTaGCTTGCAGTGTTGTTGCTGTTGTTCCCTCCTGGAAGCCTGTGG +
Preference number: 2 (lower is better)
Translates to: CSVQQTAVTVSSDMA*LAVLLLLFPPGSLW
Trigger: CCACAGGCTTCCAGGAGGGAACAACAGCAACAACACTGCAAGCAAGGCCATGTCGGATGACACAGTGACAGCTGTCTGCTGCACACTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR CAA 90 bp GCGTGCGGGAGGAGGAGTAGGGCCTTTGCCGGTCCCTCTCGATGGTaGAAGACGAGGCTACAAAGTGGTATTGTGACCATCCATCCTTTT +
Preference number: 2 (lower is better)
Translates to: ACGRRSRAFAGPSRW*KTRLQSGIVTIHPF
Trigger: AAAAGGATGGATGGTCACAATACCACTTTGTAGCCTCGTCTTCAACCATCGAGAGGGACCGGCAAAGGCCCTACTCCTCCTCCCGCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR-3UTR GCA 90 bp CAAAAGGCAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCCCCCACCGGCCCGAATaGCTCGTCTCTCCTCCCATC +
Preference number: 2 (lower is better)
Translates to: QKARNILLYRGTPMQPEAPHRPE*LVSPPI
Trigger: GATGGGAGGAGAGACGAGGCATTCGGGCCGGTGGGG...GGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTGCCTTTTG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
3UTR-3UTR GCA 90 bp TCGATCTCACTGCTCCCCAGCGCAGACTGGATCACGTACAGCAAGGCATCCGTATCACCAGTGCTGGGATaGCACCACAGTTTTTCAGGG +
Preference number: 2 (lower is better)
Translates to: SISLLPSADWITYSKASVSPVLG*HHSFSG
Trigger: CCCTGAAAAACTGTGGTGGCATCCCAGCACTGGTGA...TACGGATGCCTTGCTGTACGTGATCCAGTCTGCGCTGGGGAGCAGTGAGATCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR-3UTR CCA 90 bp AGGCCGGGTAGTGGCTCGTTTCATAGTTCAGTTCACTGTAGGGACGGGCAGCTGTCTGAATGCTATCAATaGACGGGGACCTGGCCAAGG +
Preference number: 2 (lower is better)
Translates to: RPGSGSFHSSVHCRDGQLSECYQ*TGTWPR
Trigger: CCTTGGCCAGGTCCCCGTCCATTGATAGCATTCAGA...CAGCTGCCCGTCCCTACAGTGAACTGAACTATGAAACGAGCCACTACCCGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR-3UTR CCA 90 bp TTTGCCGATGAGCTCCTTATTTCTGACGTCCAAGGCCATGTTCCGCAGCGCAGTCTCCCCAGCGCAGACTaGATCACGTACAGCAAGGCA +
Preference number: 2 (lower is better)
Translates to: FADELLISDVQGHVPQRSLPSAD*ITYSKA
Trigger: TGCCTTGCTGTACGTGATCCAGTCTGCGCTGGGGAG...ACTGCGCTGCGGAACATGGCCTTGGACGTCAGAAATAAGGAGCTCATCGGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR CAA 90 bp ACAGCTGTCACTGTGTCATCCGACATGGCCTTGCTTGCAGTGTTGTaGCTGTTGTTCCCTCCTGGAAGCCTGTGGACTAGGTCTCGCATG +
Preference number: 2 (lower is better)
Translates to: TAVTVSSDMALLAVL*LLFPPGSLWTRSRM
Trigger: CATGCGAGACCTAGTCCACAGGCTTCCAGGAGGGAACAACAGCAACAACACTGCAAGCAAGGCCATGTCGGATGACACAGTGACAGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR CAA 90 bp GTGTGCAGCAGACAGCTGTCACTGTGTCATCCGACATGGCCTTGCTaGCAGTGTTGTTGCTGTTGTTCCCTCCTGGAAGCCTGTGGACTA +
Preference number: 2 (lower is better)
Translates to: VCSRQLSLCHPTWPC*QCCCCCSLLEACGL
Trigger: TAGTCCACAGGCTTCCAGGAGGGAACAACAGCAACAACACTGCAAGCAAGGCCATGTCGGATGACACAGTGACAGCTGTCTGCTGCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR-3UTR TCA 90 bp TGTCATGGCATCTTTCCTGGAAGTGTGTTCGCCTTTAGCTCCGTGGTAGGTGGCACTTCGGTCATCCGATaGTCCAACAGGTCCACCAGG +
Preference number: 2 (lower is better)
Translates to: CHGIFPGSVFAFSSVVGGTSVIR*SNRSTR
Trigger: CCTGGTGGACCTGTTGGATCATCGGATGACCGAAGT...GCCACCTACCACGGAGCTAAAGGCGAACACACTTCCAGGAAAGATGCCATGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR-3UTR TCA 90 bp AGGCCGGGTAGTGGCTCGTTTCATAGTTCAGTTCACTGTAGGGACGGGCAGCTGGTAGGGTTTGACTATTaGTGGGTGCCACAGCATCTG +
Preference number: 2 (lower is better)
Translates to: RPGSGSFHSSVHCRDGQLVGFDY*WVPQHL
Trigger: CAGATGCTGTGGCACCCATCAATAGTCAAACCCTAC...CAGCTGCCCGTCCCTACAGTGAACTGAACTATGAAACGAGCCACTACCCGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR-3UTR GCA 90 bp CAGCAGACAGCTGTCACTGTGTCATCCGACATGGCCTTGCTTGCAGTGTTGTTGTGGTATGCATGCACATaGACTGTTCCCGGAGCGCCT +
Preference number: 2 (lower is better)
Translates to: QQTAVTVSSDMALLAVLLWYACT*TVPGAP
Trigger: AGGCGCTCCGGGAACAGTGCATGTGCATGCATACCA...CAACAACACTGCAAGCAAGGCCATGTCGGATGACACAGTGACAGCTGTCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR-3UTR GCA 90 bp TGCAACCTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGACCCCACCGGCCCGAATaGCTCGTCTCTCCTCCCATC +
Preference number: 2 (lower is better)
Translates to: CNLKPRVTTDEESKQSVRPHRPE*LVSPPI
Trigger: GATGGGAGGAGAGACGAGGCATTCGGGCCGGTGGGG...TCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAGGTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
3UTR-3UTR CCA 90 bp AGGTGCATGGTGTACTCGCTGGCGGGAGGGCGATGGTGGACCTGGTCCTCGAAGGAAAGAAATGTCTTGTaGTATGCATGCACATGCACT +
Preference number: 2 (lower is better)
Translates to: RCMVYSLAGGRWWTWSSKERNVL*YACTCT
Trigger: AGTGCATGTGCATGCATACCACAAGACATTTCTTTC...CTTCGAGGACCAGGTCCACCATCGCCCTCCCGCCAGCGAGTACACCATGCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
3UTR CAA 90 bp ACCGCGTTGGTCAGTACTGCTAGGGCATCCTGGATGATTGGCATTTaGAGTGCATCGCATGAGGAGAGGTTCCAAAGGACTCCTGTGACC +
Preference number: 2 (lower is better)
Translates to: TALVSTARASWMIGI*SASHEERFQRTPVT
Trigger: GGTCACAGGAGTCCTTTGGAACCTCTCCTCATGCGATGCACTCAAAATGCCAATCATCCAGGATGCCCTAGCAGTACTGACCAACGCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR-3UTR TCA 90 bp CTATTCTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCAGAGTAAACAAAGCGTaGGAAGCCGTCCCCCACACA +
Preference number: 2 (lower is better)
Translates to: LFCVLCLTITLTPHRPECRVNKA*EAVPHT
Trigger: TGTGTGGGGGACGGCTTCTCACGCTTTGTTTACTCT...GCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAGAATAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
3UTR-3UTR TCA 90 bp GTGTACTCGCTGGCGGGAGGGCGATGGTGGACCTGGTCCTCGAAGAAGGACTCAGAAATTCCAGTGTTTTaGGCTAGAGTCCATGTAATG +
Preference number: 2 (lower is better)
Translates to: VYSLAGGRWWTWSSKKDSEIPVF*ARVHVM
Trigger: CATTACATGGACTCTAGCTCAAAACACTGGAATTTC...TGAGTCCTTCTTCGAGGACCAGGTCCACCATCGCCCTCCCGCCAGCGAGTACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513588.5
3UTR-3UTR GCA 90 bp TCCTATACAAAGTTGAAATTCCAGTGTTTTGAGCTGTCATGGCATCTTTCCTGGGTGGGCCGTGCTGGCTaGCTGTGCGCTGCAAGGGGA +
Preference number: 2 (lower is better)
Translates to: SYTKLKFQCFELSWHLSWVGRAG*LCAARG
Trigger: TCCCCTTGCAGCGCACAGGCAGCCAGCACGGCCCAC...CCAGGAAAGATGCCATGACAGCTCAAAACACTGGAATTTCAACTTTGTATAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR-3UTR GCA 90 bp GTGTGTAAACTATTCTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGTGGTATGCATGCACATaGACTGTTCCCGGAGCGCCT +
Preference number: 2 (lower is better)
Translates to: VCKLFCVLCLTITLTPHRWYACT*TVPGAP
Trigger: AGGCGCTCCGGGAACAGTGCATGTGCATGCATACCA...CCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAGAATAGTTTACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
3UTR-3UTR GCA 90 bp CTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGAAGCCGTTGGTATGCATGCACATaGACTGTTCCCGGAGCGCCT +
Preference number: 2 (lower is better)
Translates to: LKPRVTTDEESKQSVRSRWYACT*TVPGAP
Trigger: AGGCGCTCCGGGAACAGTGCATGTGCATGCATACCA...ACGGCTTCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
3UTR-3UTR GCA 90 bp AGGGAAACTGGTGCTGCAACATCTGAATCACTTCCGGCAGTTCCGGGTCTCTCCACGCTAGAAAGGTGCTaGCCACTGTCATATTTAGGA +
Preference number: 2 (lower is better)
Translates to: RETGAATSESLPAVPGLSTLERC*PLSYLG
Trigger: TCCTAAATATGACAGTGGGCAGCACCTTTCTAGCGT...GGAGAGACCCGGAACTGCCGGAAGTGATTCAGATGTTGCAGCACCAGTTTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR-3UTR GCA 90 bp GTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGAAGCCGTCCCCCACACAGTACAGAGGAACCCCAATaGAACCTGAAGCCTAGAGTC +
Preference number: 2 (lower is better)
Translates to: VTTDEESKQSVRSRPPHSTEEPQ*NLKPRV
Trigger: GACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGT...ACTGTGTGGGGGACGGCTTCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
3UTR-3UTR GCA 90 bp AAGACGAGGCTACAAAGTGGTATTGTGACCATCCATCCTTTTTGTAGAGACTCCCCACTTCCAGCTCCCTaGAGCCAAGTTCTGCAGGGC +
Preference number: 2 (lower is better)
Translates to: KTRLQSGIVTIHPFCRDSPLPAP*SQVLQG
Trigger: GCCCTGCAGAACTTGGCTGCAGGGAGCTGGAAGTGG...GGAGTCTCTACAAAAAGGATGGATGGTCACAATACCACTTTGTAGCCTCGTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR-3UTR CCA 90 bp TCTGAAATGGCTGGTAGGTCTCGTAATCTTTTCTGCTGGGCTCCTGTGGGACTGCTGGATCCCTTTTGGTaGTTCAGCACAGTCTGGAAG +
Preference number: 2 (lower is better)
Translates to: SEMAGRSRNLFCWAPVGLLDPFW*FSTVWK
Trigger: CTTCCAGACTGTGCTGAACCACCAAAAGGGATCCAG...CAGTCCCACAGGAGCCCAGCAGAAAAGATTACGAGACCTACCAGCCATTTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR CAA 90 bp GCTGGGATGCCACCACAGTTTTTCAGGGCAATTTTGTTATCATCGTaGGCCTTCCCATACACCAGGTTTCTCAGAGCTCCACAGGCACTA +
Preference number: 2 (lower is better)
Translates to: AGMPPQFFRAILLSS*AFPYTRFLRAPQAL
Trigger: TAGTGCCTGTGGAGCTCTGAGAAACCTGGTGTATGGGAAGGCCAACGATGATAACAAAATTGCCCTGAAAAACTGTGGTGGCATCCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR-3UTR TCA 90 bp CAAAAGGCAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCAACCCCAATGCAACCTaGAGCCTAGAGTCACAACGG +
Preference number: 2 (lower is better)
Translates to: QKARNILLYRGTPMQPEANPNAT*SLESQR
Trigger: CCGTTGTGACTCTAGGCTTCAGGTTGCATTGGGGTT...GGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTGCCTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
3UTR-3UTR TCA 90 bp AGTTTTCAACGGTCTTGCTATCGATCTCACTGCTCCCCAGCGCAGACTGGATCATCTCTGGGATCTTTCTaGATGCTATCAATGGACGGG +
Preference number: 2 (lower is better)
Translates to: SFQRSCYRSHCSPAQTGSSLGSF*MLSMDG
Trigger: CCCGTCCATTGATAGCATTCAGAAAGATCCCAGAGA...TGATCCAGTCTGCGCTGGGGAGCAGTGAGATCGATAGCAAGACCGTTGAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR-3UTR GCA 90 bp AGTGTGCAGCAGACAGCTGTCACTGTGTCATCCGACATGGCCTTGCTTGCAGTGAGCACCTGTGATGAATaGAGCTGTATTTTCCGATCA +
Preference number: 2 (lower is better)
Translates to: SVQQTAVTVSSDMALLAVSTCDE*SCIFRS
Trigger: TGATCGGAAAATACAGCTGCATTCATCACAGGTGCT...CACTGCAAGCAAGGCCATGTCGGATGACACAGTGACAGCTGTCTGCTGCACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR-3UTR CCA 90 bp AGTGTGCAGCAGACAGCTGTCACTGTGTCATCCGACATGGCCTTGCTTGCAGTGTTTTGTTATCATCGTTaGCCTTCCCATACACCAGGT +
Preference number: 2 (lower is better)
Translates to: SVQQTAVTVSSDMALLAVFCYHR*PSHTPG
Trigger: ACCTGGTGTATGGGAAGGCCAACGATGATAACAAAA...CACTGCAAGCAAGGCCATGTCGGATGACACAGTGACAGCTGTCTGCTGCACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR CAA 90 bp AACCTCACCAGTGCTGGGATGCCACCACAGTTTTTCAGGGCAATTTaGTTATCATCGTTGGCCTTCCCATACACCAGGTTTCTCAGAGCT +
Preference number: 2 (lower is better)
Translates to: NLTSAGMPPQFFRAI*LSSLAFPYTRFLRA
Trigger: AGCTCTGAGAAACCTGGTGTATGGGAAGGCCAACGATGATAACAAAATTGCCCTGAAAAACTGTGGTGGCATCCCAGCACTGGTGAGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR-3UTR GCA 90 bp TCTAAAATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACGTAGGTGCCGGTGTGTaGTGGCGGCAGAGGGTCCCC +
Preference number: 2 (lower is better)
Translates to: SKIALNISLLVITAFLWNVGAGV*WRQRVP
Trigger: GGGGACCCTCTGCCGCCAGCACACACCGGCACCTAC...GTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTATTTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR-3UTR CCA 90 bp TCGTTGGCCTTCCCATACACCAGGTTTCTCAGAGCTCCACAGGCACTACGGTGGTCCATCCAAATTCTCTaGGATCTTTCTGAATGCTAT +
Preference number: 2 (lower is better)
Translates to: SLAFPYTRFLRAPQALRWSIQIL*DLSECY
Trigger: ATAGCATTCAGAAAGATCCCAGAGAATTTGGATGGA...CCACCGTAGTGCCTGTGGAGCTCTGAGAAACCTGGTGTATGGGAAGGCCAACGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR CAA 90 bp GGCGATGGTGGACCTGGTCCTCGAAGAAGGACTCATCGTAATTTCTaGTGGAATTCTGAAATGGCTGGTAGGTCTCGTAATCTTTTCTGC +
Preference number: 2 (lower is better)
Translates to: GDGGPGPRRRTHRNF*WNSEMAGRSRNLFC
Trigger: GCAGAAAAGATTACGAGACCTACCAGCCATTTCAGAATTCCACAAGAAATTACGATGAGTCCTTCTTCGAGGACCAGGTCCACCATCGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
3UTR-3UTR GCA 90 bp GAGGAAACACGGCGGCATTGGTGTAATATACACAACGCGCTTTTCTTCTTTAATTGGTATGCATGCACATaGACTGTTCCCGGAGCGCCT +
Preference number: 2 (lower is better)
Translates to: EETRRHWCNIHNALFFFNWYACT*TVPGAP
Trigger: AGGCGCTCCGGGAACAGTGCATGTGCATGCATACCA...ATTAAAGAAGAAAAGCGCGTTGTGTATATTACACCAATGCCGCCGTGTTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000513588.5
3UTR-3UTR GCA 90 bp GCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTTAGGATCACTTTAGCTTTCGTTGAGGACCTGAGATaGAGCCTTGACCACTTTTGG +
Preference number: 2 (lower is better)
Translates to: AHARKVLPTVIFRITLAFVEDLR*SLDHFW
Trigger: CCAAAAGTGGTCAAGGCTGCATCTCAGGTCCTCAAC...GAAAGCTAAAGTGATCCTAAATATGACAGTGGGCAGCACCTTTCTAGCGTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR-3UTR CCA 90 bp GCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTTAGGATCACTTTAGCTTTCCATCTGGATCCCTTTTaGTGGTTCAGCACAGTCTGG +
Preference number: 2 (lower is better)
Translates to: AHARKVLPTVIFRITLAFHLDPF*WFSTVW
Trigger: CCAGACTGTGCTGAACCACCAAAAGGGATCCAGATG...GAAAGCTAAAGTGATCCTAAATATGACAGTGGGCAGCACCTTTCTAGCGTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR-3UTR GCA 90 bp CCCCAATGCAACCTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCACGCTAGAAAGGTGCTaGCCACTGTCATATTTAGGA +
Preference number: 2 (lower is better)
Translates to: PQCNLKPRVTTDEESKQSTLERC*PLSYLG
Trigger: TCCTAAATATGACAGTGGGCAGCACCTTTCTAGCGT...GCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAGGTTGCATTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
3UTR-3UTR GCA 90 bp GAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCTATTCTGTGTCTTGTaGTTAACGATAACCCTTACG +
Preference number: 2 (lower is better)
Translates to: ERNVLWYACTCTVPGAPVLFCVL*LTITLT
Trigger: CGTAAGGGTTATCGTTAAGCACAAGACACAGAATAG...CACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
3UTR-3UTR GCA 90 bp AACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGACAGAGGAACCCCAATaGAACCTGAAGCCTAGAGTC +
Preference number: 2 (lower is better)
Translates to: NHVQYKALLVTLQLTLERTEEPQ*NLKPRV
Trigger: GACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGT...CCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
3UTR-3UTR GCA 90 bp CAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCCTTTGCTTTTGGAGATaGCGACCAACTTCTCGATGC +
Preference number: 2 (lower is better)
Translates to: QNRKKCLVVCMHMHCSRSLCFWR*RPTSRC
Trigger: GCATCGAGAAGTTGGTCGGCATCTCCAAAAGCAAAG...GCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR-3UTR TCA 90 bp GCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTTAGGATCACTTTAGCTTTCACTGGCCTAATATCCTaGGTCACTAGATGGTCAGAA +
Preference number: 2 (lower is better)
Translates to: AHARKVLPTVIFRITLAFTGLIS*VTRWSE
Trigger: TTCTGACCATCTAGTGACTCAGGATATTAGGCCAGT...GAAAGCTAAAGTGATCCTAAATATGACAGTGGGCAGCACCTTTCTAGCGTGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304623.13
3UTR-3UTR TCA 90 bp CAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCATTTTCCGATCATCCTaGAGAGGCGAATTTTCCCAG +
Preference number: 2 (lower is better)
Translates to: QNRKKCLVVCMHMHCSRSIFRSS*RGEFSQ
Trigger: CTGGGAAAATTCGCCTCTTCAGGATGATCGGAAAAT...GCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR-3UTR GCA 90 bp CTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGAAGCCGTAAATGTCTTGTGGTATaGATGCACATGCACTGTTCC +
Preference number: 2 (lower is better)
Translates to: LKPRVTTDEESKQSVRSRKCLVV*MHMHCS
Trigger: GGAACAGTGCATGTGCATGCATACCACAAGACATTT...ACGGCTTCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
3UTR-3UTR CCA 90 bp AAGACGAGGCTACAAAGTGGTATTGTGACCATCCATCCTTTTTGTAGAGACTCCGGCATCCTGGATGATTaGCATTTTGAGTGCATCGCA +
Preference number: 2 (lower is better)
Translates to: KTRLQSGIVTIHPFCRDSGILDD*HFECIA
Trigger: TGCGATGCACTCAAAATGCCAATCATCCAGGATGCC...GGAGTCTCTACAAAAAGGATGGATGGTCACAATACCACTTTGTAGCCTCGTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR-3UTR GCA 90 bp AGAGCAAAGCTAGTTTACCCGCGGCCCATGTTCTTTTCGATGGTTAGCCTTATTAAATGTCTTGTGGTATaGATGCACATGCACTGTTCC +
Preference number: 2 (lower is better)
Translates to: RAKLVYPRPMFFSMVSLIKCLVV*MHMHCS
Trigger: GGAACAGTGCATGTGCATGCATACCACAAGACATTT...AATAAGGCTAACCATCGAAAAGAACATGGGCCGCGGGTAAACTAGCTTTGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304623.13
3UTR-3UTR CCA 90 bp GAGGAAACACGGCGGCATTGGTGTAATATACACAACGCGCTTTTCTTCTTTAATGAAACACGGCGGCATTaGTGTAATATACACAACGCG +
Preference number: 2 (lower is better)
Translates to: EETRRHWCNIHNALFFFNETRRH*CNIHNA
Trigger: CGCGTTGTGTATATTACACCAATGCCGCCGTGTTTC...ATTAAAGAAGAAAAGCGCGTTGTGTATATTACACCAATGCCGCCGTGTTTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000513588.5
3UTR-3UTR CCA 90 bp AACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGATTACTAGGCACCTATTaGCCTCAGCCACTTGCATCT +
Preference number: 2 (lower is better)
Translates to: NKTERNVLWYACTCTVPGLLGTY*PQPLAS
Trigger: AGATGCAAGTGGCTGAGGCCAATAGGTGCCTAGTAA...TCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304623.13
3UTR-3UTR TCA 90 bp TTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATTTGCAGGAGAAAAGAGTAAACAAAGCGTaGGAAGCCGTCCCCCACACA +
Preference number: 2 (lower is better)
Translates to: LSQPSYGTGFNKLNLQEKRVNKA*EAVPHT
Trigger: TGTGTGGGGGACGGCTTCTCACGCTTTGTTTACTCT...TTTCTCCTGCAAATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
3UTR-3UTR TCA 90 bp CAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCTGGTTTATCGTGTTCTaGGGGGATAAAATGTGTAAG +
Preference number: 2 (lower is better)
Translates to: QNRKKCLVVCMHMHCSRSWFIVF*GDKMCK
Trigger: CTTACACATTTTATCCCCTCAGAACACGATAAACCA...GCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304623.13
3UTR-3UTR GCA 90 bp AAAATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGGTCTTGTGGTATGCATaGACATGCACTGTTCCCGGA +
Preference number: 2 (lower is better)
Translates to: KIALNISLLVITAFLWNRVLWYA*TCTVPG
Trigger: TCCGGGAACAGTGCATGTGCATGCATACCACAAGAC...CCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
3UTR-3UTR GCA 90 bp TTTTCTGTGGATACTTCAAGTAATTGGCCCCAAAGTGAAACTGAATTGGCCATGACGCTAGAAAGGTGCTaGCCACTGTCATATTTAGGA +
Preference number: 2 (lower is better)
Translates to: FSVDTSSNWPQSETELAMTLERC*PLSYLG
Trigger: TCCTAAATATGACAGTGGGCAGCACCTTTCTAGCGT...CATGGCCAATTCAGTTTCACTTTGGGGCCAATTACTTGAAGTATCCACAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304623.13
3UTR-3UTR GCA 90 bp TTTTCTGTGGATACTTCAAGTAATTGGCCCCAAAGTGAAACTGAATTGGCCATGAGGCAAGAAACATCTTaGTGTACAGAGGAACCCCAA +
Preference number: 2 (lower is better)
Translates to: FSVDTSSNWPQSETELAMRQETS*CTEEPQ
Trigger: TTGGGGTTCCTCTGTACAGCAAGATGTTTCTTGCCT...CATGGCCAATTCAGTTTCACTTTGGGGCCAATTACTTGAAGTATCCACAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304623.13
3UTR-3UTR CCA 90 bp AACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGGAAAGAAATGTCTTGTaGTATGCATGCACATGCACT +
Preference number: 2 (lower is better)
Translates to: NHVQYKALLVTLQLTLERERNVL*YACTCT
Trigger: AGTGCATGTGCATGCATACCACAAGACATTTCTTTC...CCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
3UTR-3UTR GCA 90 bp CTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACCTCACGCTAGAAAGGTaGTGCCCACTGTCATATTTA +
Preference number: 2 (lower is better)
Translates to: LLIFPYWLSQPSYGTGFNLTLER*CPLSYL
Trigger: TAAATATGACAGTGGGCAGCACCTTTCTAGCGTGAG...GTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
3UTR-3UTR GCA 90 bp CTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACAAATGTCTTGTGGTATaGATGCACATGCACTGTTCC +
Preference number: 2 (lower is better)
Translates to: LLIFPYWLSQPSYGTGFNKCLVV*MHMHCS
Trigger: GGAACAGTGCATGTGCATGCATACCACAAGACATTT...GTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
3UTR-3UTR GCA 90 bp TTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATACGCTAGAAAGGTGCTaGCCACTGTCATATTTAGGA +
Preference number: 2 (lower is better)
Translates to: FPYWLSQPSYGTGFNKLNTLERC*PLSYLG
Trigger: TCCTAAATATGACAGTGGGCAGCACCTTTCTAGCGT...ATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
3UTR CCA 72 bp AGGCTGGGCCGGCGGCATAGCTGGCCCTCTGGAAGGTaGCCGCGGCGGCATTCTGTGGGCCGTGCTGGCTGC +
Preference number: 3 (lower is better)
Translates to: RLGRRHSWPSGR*PRRHSVGRAGC
Trigger: GCAGCCAGCACGGCCCACAGAATGCCGCCGCGGCCACCTTCCAGAGGGCCAGCTATGCCGCCGGCCCAGCCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR CCA 72 bp GCTGGCCCTCTGGAAGGTGGCCGCGGCGGCATTCTGTaGGCCGTGCTGGCTGCCTGTGCGCTGCAAGGGGAC +
Preference number: 3 (lower is better)
Translates to: AGPLEGGRGGIL*AVLAACALQGD
Trigger: GTCCCCTTGCAGCGCACAGGCAGCCAGCACGGCCCACAGAATGCCGCCGCGGCCACCTTCCAGAGGGCCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR GCA 72 bp AGGTGGCCGCGGCGGCATTCTGTGGGCCGTGCTGGCTaGCTGTGCGCTGCAAGGGGACGGAGTCGACACCAG +
Preference number: 3 (lower is better)
Translates to: RWPRRHSVGRAG*LCAARGRSRHQ
Trigger: CTGGTGTCGACTCCGTCCCCTTGCAGCGCACAGGCAGCCAGCACGGCCCACAGAATGCCGCCGCGGCCACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR GCA 72 bp AGATGGGGCTGTGCTCGTGCGGTAGGTGCCGGTGTGTaGTGGCGGCAGAGGGTCCCCCTGGCTCTGGCTGAG +
Preference number: 3 (lower is better)
Translates to: RWGCARAVGAGV*WRQRVPLALAE
Trigger: CTCAGCCAGAGCCAGGGGGACCCTCTGCCGCCAGCACACACCGGCACCTACCGCACGAGCACAGCCCCATCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR CCA 72 bp TGGGGCTGTGCTCGTGCGGTAGGTGCCGGTGTGTGCTaGCGGCAGAGGGTCCCCCTGGCTCTGGCTGAGACT +
Preference number: 3 (lower is better)
Translates to: WGCARAVGAGVC*RQRVPLALAET
Trigger: AGTCTCAGCCAGAGCCAGGGGGACCCTCTGCCGCCAGCACACACCGGCACCTACCGCACGAGCACAGCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR CCA 72 bp TGGAAGGTGGCCGCGGCGGCATTCTGTGGGCCGTGCTaGCTGCCTGTGCGCTGCAAGGGGACGGAGTCGACA +
Preference number: 3 (lower is better)
Translates to: WKVAAAAFCGPC*LPVRCKGTEST
Trigger: TGTCGACTCCGTCCCCTTGCAGCGCACAGGCAGCCAGCACGGCCCACAGAATGCCGCCGCGGCCACCTTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR CCA 72 bp GGTCCGCGTAATTGGAGGCTGGGCCGGCGGCATAGCTaGCCCTCTGGAAGGTGGCCGCGGCGGCATTCTGTG +
Preference number: 3 (lower is better)
Translates to: GPRNWRLGRRHS*PSGRWPRRHSV
Trigger: CACAGAATGCCGCCGCGGCCACCTTCCAGAGGGCCAGCTATGCCGCCGGCCCAGCCTCCAATTACGCGGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR GCA 72 bp GGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTaGCCTGCTCCTCACACCCAGGAGTCGGGGGAGGCC +
Preference number: 3 (lower is better)
Translates to: GMHAHALFPERL*PAPHTQESGEA
Trigger: GGCCTCCCCCGACTCCTGGGTGTGAGGAGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
3UTR GCA 72 bp TGGCCTCGCCACAGAGTAGCCCGTCCAGCTCGTCCGTaGCCATGTGCTGTCCCTGAGACGTTTCTGCCGCCA +
Preference number: 3 (lower is better)
Translates to: WPRHRVARPARP*PCAVPETFLPP
Trigger: TGGCGGCAGAAACGTCTCAGGGACAGCACATGGGCACGGACGAGCTGGACGGGCTACTCTGTGGCGAGGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR CCA 72 bp GACAATACTGCAGCTGTCGGTAGGGGTCCGCGTAATTaGAGGCTGGGCCGGCGGCATAGCTGGCCCTCTGGA +
Preference number: 3 (lower is better)
Translates to: DNTAAVGRGPRN*RLGRRHSWPSG
Trigger: TCCAGAGGGCCAGCTATGCCGCCGGCCCAGCCTCCAATTACGCGGACCCCTACCGACAGCTGCAGTATTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR GCA 72 bp TATACTGACCACTTCCAGCTCCCTGCAGCCAAGTTCTaGAGGGCGCCTGCCGCCCCTTCCAGCGTGTCTGGA +
Preference number: 3 (lower is better)
Translates to: YTDHFQLPAAKF*RAPAAPSSVSG
Trigger: TCCAGACACGCTGGAAGGGGCGGCAGGCGCCCTGCAGAACTTGGCTGCAGGGAGCTGGAAGTGGTCAGTATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR TCA 72 bp CAGGGCGCCTGCCGCCCCTTCCAGCGTGTCTGGATTTaGGCACTCAGAGAGCAGTGTGAGGTAGGGTTTGAC +
Preference number: 3 (lower is better)
Translates to: QGACRPFQRVWI*ALREQCEVGFD
Trigger: GTCAAACCCTACCTCACACTGCTCTCTGAGTGCTCAAATCCAGACACGCTGGAAGGGGCGGCAGGCGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR CCA 72 bp TGGGATCTTTCTGAATGCTATCAATGGACGGGGACCTaGCCAAGGTGCCTTCAGGCGGGAGAGCAGGGCCGG +
Preference number: 3 (lower is better)
Translates to: WDLSECYQWTGT*PRCLQAGEQGR
Trigger: CCGGCCCTGCTCTCCCGCCTGAAGGCACCTTGGCCAGGTCCCCGTCCATTGATAGCATTCAGAAAGATCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR-3UTR CAA 90 bp GGACTTGAGACCCAGGTGCATGGTGTACTCGCTGGCGGGAGGGCGATGGTGGACGAGCTGGATGCCTCCTaGTCTCCTTATCTCGGCTTT +
Preference number: 3 (lower is better)
Translates to: GLETQVHGVLAGGRAMVDELDAS*SPYLGF
Trigger: AAAGCCGAGATAAGGAGACAAGGAGGCATCCAGCTC...GTCCACCATCGCCCTCCCGCCAGCGAGTACACCATGCACCTGGGTCTCAAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR-3UTR CAA 90 bp GGTGCCACAGCATCTGGATCCCTTTTGGTGGTTCAGCACAGTCTGGAAGAGGTCGAGCTCTCAGCATCCTaGCCATTGGCCTCGCCACAG +
Preference number: 3 (lower is better)
Translates to: GATASGSLLVVQHSLEEVELSAS*PLASPQ
Trigger: CTGTGGCGAGGCCAATGGCAAGGATGCTGAGAGCTC...GACCTCTTCCAGACTGTGCTGAACCACCAAAAGGGATCCAGATGCTGTGGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR TCA 72 bp CAGCTGAGTAGAAGTCAACGTAGTTGCCGGTGGACTTaGGACCCAGGTGCATGGTGTACTCGCTGGCGGGAG +
Preference number: 3 (lower is better)
Translates to: QLSRSQRSCRWT*DPGAWCTRWRE
Trigger: CTCCCGCCAGCGAGTACACCATGCACCTGGGTCTCAAGTCCACCGGCAACTACGTTGACTTCTACTCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
3UTR-3UTR CAA 90 bp TCACACCCAGGAGTCGGGGGAGGCCGGGTAGTGGCTCGTTTCATAGTTCAGTTCGAAACCTGGTTGTGTTaGATGTCTTCAGCGGGCGCA +
Preference number: 3 (lower is better)
Translates to: SHPGVGGGRVVARFIVQFETWLC*MSSAGA
Trigger: TGCGCCCGCTGAAGACATCAAACACAACCAGGTTTC...GAACTGAACTATGAAACGAGCCACTACCCGGCCTCCCCCGACTCCTGGGTGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
3UTR GCA 72 bp CTCCTTTGCTTTTGGAGATGCCGACCAACTTCTCGATaGCACCGGCATCCCGTAAGGCCTTGGCGTTCTCCA +
Preference number: 3 (lower is better)
Translates to: LLCFWRCRPTSR*HRHPVRPWRSP
Trigger: TGGAGAACGCCAAGGCCTTACGGGATGCCGGTGGCATCGAGAAGTTGGTCGGCATCTCCAAAAGCAAAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR CCA 72 bp GGGAGGAGGAGTAGGGCCTTTGCCGGTCCCTCTCGATaGTTGAAGACGAGGCTACAAAGTGGTATTGTGACC +
Preference number: 3 (lower is better)
Translates to: GRRSRAFAGPSR*LKTRLQSGIVT
Trigger: GGTCACAATACCACTTTGTAGCCTCGTCTTCAACCATCGAGAGGGACCGGCAAAGGCCCTACTCCTCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR GCA 72 bp TGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATaGCTCGTCTCTCCTCCCATCAACCACGTTCAGTAT +
Preference number: 3 (lower is better)
Translates to: CLTITLTPHRPE*LVSPPINHVQY
Trigger: ATACTGAACGTGGTTGATGGGAGGAGAGACGAGGCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
3UTR CCA 72 bp GTCTTGCTATCGATCTCACTGCTCCCCAGCGCAGACTaGATCACGTACAGCAAGGCATCCGTAAGCCCATCA +
Preference number: 3 (lower is better)
Translates to: VLLSISLLPSAD*ITYSKASVSPS
Trigger: TGATGGGCTTACGGATGCCTTGCTGTACGTGATCCAGTCTGCGCTGGGGAGCAGTGAGATCGATAGCAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR-3UTR CAA 90 bp CAGCAGACAGCTGTCACTGTGTCATCCGACATGGCCTTGCTTGCAGTGTTGTTGTCCAGGTCAGTCGTCTaGCGGAGTAACCTCACCAGT +
Preference number: 3 (lower is better)
Translates to: QQTAVTVSSDMALLAVLLSRSVV*RSNLTS
Trigger: ACTGGTGAGGTTACTCCGCAAGACGACTGACCTGGA...CAACAACACTGCAAGCAAGGCCATGTCGGATGACACAGTGACAGCTGTCTGCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR-3UTR CAA 90 bp CGCTGGCGGGAGGGCGATGGTGGACCTGGTCCTCGAAGAAGGACTCATCGTAATTTATCTCCTTTGCTTTaGGAGATGCCGACCAACTTC +
Preference number: 3 (lower is better)
Translates to: RWREGDGGPGPRRRTHRNLSPLL*EMPTNF
Trigger: GAAGTTGGTCGGCATCTCCAAAAGCAAAGGAGATAA...ATTACGATGAGTCCTTCTTCGAGGACCAGGTCCACCATCGCCCTCCCGCCAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR TCA 72 bp TTAGACTGGACCGAGGGAAACTGGTGCTGCAACATCTaGATCACTTCCGGCAGTTCCGGGTCTCTCCATCCA +
Preference number: 3 (lower is better)
Translates to: LDWTEGNWCCNI*ITSGSSGSLHP
Trigger: TGGATGGAGAGACCCGGAACTGCCGGAAGTGATTCAGATGTTGCAGCACCAGTTTCCCTCGGTCCAGTCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR TCA 72 bp TTTCCGATCATCCTGAAGAGGCGAATTTTCCCAGCCTaGGTGGGGGATAATCACCGCGTTGGTCAGTACTGC +
Preference number: 3 (lower is better)
Translates to: FPIILKRRIFPA*VGDNHRVGQYC
Trigger: GCAGTACTGACCAACGCGGTGATTATCCCCCACTCAGGCTGGGAAAATTCGCCTCTTCAGGATGATCGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR GCA 72 bp GTCCCCCACACAGTGTGTAAACTATTCTGTGTCTTGTaGTTAACGATAACCCTTACGCCCCACCGGCCCGAA +
Preference number: 3 (lower is better)
Translates to: VPHTVCKLFCVL*LTITLTPHRPE
Trigger: TTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAGAATAGTTTACACACTGTGTGGGGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
3UTR GCA 72 bp ACACACAGTTTTCAACGGTCTTGCTATCGATCTCACTaGTCCCCAGCGCAGACTGGATCACGTACAGCAAGG +
Preference number: 3 (lower is better)
Translates to: THSFQRSCYRSH*SPAQTGSRTAR
Trigger: CCTTGCTGTACGTGATCCAGTCTGCGCTGGGGAGCAGTGAGATCGATAGCAAGACCGTTGAAAACTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR-3UTR CAA 90 bp CTATTCTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCAAGGCAAGAAACATCTaGCTGTACAGAGGAACCCCA +
Preference number: 3 (lower is better)
Translates to: LFCVLCLTITLTPHRPECKARNI*LYRGTP
Trigger: TGGGGTTCCTCTGTACAGCAAGATGTTTCTTGCCTT...GCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAGAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
3UTR-3UTR CAA 90 bp GGACCTGGTCCTCGAAGAAGGACTCATCGTAATTTCTTGTGGAATTCTGAAATGGCACTTGCTGAGCGGTaGTTGGGAGACACGCGCACA +
Preference number: 3 (lower is better)
Translates to: GPGPRRRTHRNFLWNSEMALAER*LGDTRT
Trigger: TGTGCGCGTGTCTCCCAACAACCGCTCAGCAAGTGC...CATTTCAGAATTCCACAAGAAATTACGATGAGTCCTTCTTCGAGGACCAGGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR TCA 72 bp CGTTTCATAGTTCAGTTCACTGTAGGGACGGGCAGCTaGGTAGAAGTCAACGTAGTTGCCGGTGGACTTGAG +
Preference number: 3 (lower is better)
Translates to: RFIVQFTVGTGS*VEVNVVAGGLE
Trigger: CTCAAGTCCACCGGCAACTACGTTGACTTCTACTCAGCTGCCCGTCCCTACAGTGAACTGAACTATGAAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
3UTR GCA 72 bp AAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATaGACTGTTCCCGGAGCGCCTGTGCCCTGCTCCTCA +
Preference number: 3 (lower is better)
Translates to: KTERNVLWYACT*TVPGAPVPCSS
Trigger: TGAGGAGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
3UTR TCA 72 bp CTCAGATCTCGGTACTGCCACATGCTGTTGAGGACCTaGGATGCAGCCTTGACCACTTTTGGAGAGTGTTTA +
Preference number: 3 (lower is better)
Translates to: LRSRYCHMLLRT*DAALTTFGECL
Trigger: TAAACACTCTCCAAAAGTGGTCAAGGCTGCATCTCAGGTCCTCAACAGCATGTGGCAGTACCGAGATCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR GCA 72 bp ATCTCGGTACTGCCACATGCTGTTGAGGACCTGAGATaGAGCCTTGACCACTTTTGGAGAGTGTTTATCTCC +
Preference number: 3 (lower is better)
Translates to: ISVLPHAVEDLR*SLDHFWRVFIS
Trigger: GGAGATAAACACTCTCCAAAAGTGGTCAAGGCTGCATCTCAGGTCCTCAACAGCATGTGGCAGTACCGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR CCA 72 bp ATAATCACCGCGTTGGTCAGTACTGCTAGGGCATCCTaGATGATTGGCATTTTGAGTGCATCGCATGAGGAG +
Preference number: 3 (lower is better)
Translates to: IITALVSTARAS*MIGILSASHEE
Trigger: CTCCTCATGCGATGCACTCAAAATGCCAATCATCCAGGATGCCCTAGCAGTACTGACCAACGCGGTGATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR-3UTR CAA 90 bp GCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTTAGGATCACTTTAGCTTTCAGAGCAGGGCCGGATTaGCTGTATGGAGACTCAACA +
Preference number: 3 (lower is better)
Translates to: AHARKVLPTVIFRITLAFRAGPD*LYGDST
Trigger: TGTTGAGTCTCCATACAGCAAATCCGGCCCTGCTCT...GAAAGCTAAAGTGATCCTAAATATGACAGTGGGCAGCACCTTTCTAGCGTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR GCA 72 bp AGGCAAGAAACATCTTGCTGTACAGAGGAACCCCAATaGAACCTGAAGCCTAGAGTCACAACGGATGAAGAG +
Preference number: 3 (lower is better)
Translates to: RQETSCCTEEPQ*NLKPRVTTDEE
Trigger: CTCTTCATCCGTTGTGACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
3UTR CCA 72 bp CACCACAGTTTTTCAGGGCAATTTTGTTATCATCGTTaGCCTTCCCATACACCAGGTTTCTCAGAGCTCCAC +
Preference number: 3 (lower is better)
Translates to: HHSFSGQFCYHR*PSHTPGFSELH
Trigger: GTGGAGCTCTGAGAAACCTGGTGTATGGGAAGGCCAACGATGATAACAAAATTGCCCTGAAAAACTGTGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR-3UTR CAA 90 bp TCCTATACAAAGTTGAAATTCCAGTGTTTTGAGCTGTCATGGCATCTTTCCTGGGCATCTGGATCCCTTTaGGTGGTTCAGCACAGTCTG +
Preference number: 3 (lower is better)
Translates to: SYTKLKFQCFELSWHLSWASGSL*VVQHSL
Trigger: CAGACTGTGCTGAACCACCAAAAGGGATCCAGATGC...CCAGGAAAGATGCCATGACAGCTCAAAACACTGGAATTTCAACTTTGTATAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR TCA 72 bp AAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTaGAGCCTAGAGTCACAACGGATGAAGAGAGTAAAC +
Preference number: 3 (lower is better)
Translates to: KHLAVQRNPNAT*SLESQRMKRVN
Trigger: GTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
3UTR-3UTR CAA 90 bp AACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAAAGGCAAGAAACATCTaGCTGTACAGAGGAACCCCA +
Preference number: 3 (lower is better)
Translates to: NKTERNVLWYACTCTVPGKARNI*LYRGTP
Trigger: TGGGGTTCCTCTGTACAGCAAGATGTTTCTTGCCTT...TCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
3UTR CCA 72 bp GAAGGACTCATCGTAATTTCTTGTGGAATTCTGAAATaGCTGGTAGGTCTCGTAATCTTTTCTGCTGGGCTC +
Preference number: 3 (lower is better)
Translates to: EGLIVISCGILK*LVGLVIFSAGL
Trigger: GAGCCCAGCAGAAAAGATTACGAGACCTACCAGCCATTTCAGAATTCCACAAGAAATTACGATGAGTCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
3UTR-3UTR CAA 90 bp GGACCTGGTCCTCGAAGAAGGACTCATCGTAATTTCTTGTGGAATTCTGAAATGTCCATCCCACTGATCTaGGGATTTCTTTTTCTTCTT +
Preference number: 3 (lower is better)
Translates to: GPGPRRRTHRNFLWNSEMSIPLI*GFLFLL
Trigger: AAGAAGAAAAAGAAATCCCAAGATCAGTGGGATGGA...CATTTCAGAATTCCACAAGAAATTACGATGAGTCCTTCTTCGAGGACCAGGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR-3UTR CAA 90 bp AACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGATCGGCTTTAATTTTGTaGTCTCCAAAACAGAGGTGT +
Preference number: 3 (lower is better)
Translates to: NKTERNVLWYACTCTVPGSALIL*SPKQRC
Trigger: ACACCTCTGTTTTGGAGACAACAAAATTAAAGCCGA...TCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR TCA 72 bp GTAGAGAGGGTTGATATCCAAGTATGCGTGAATGTGTaGAAATCCTATAACTCCACTTCAACTGGCCTAATA +
Preference number: 3 (lower is better)
Translates to: VERVDIQVCVNV*KSYNSTSTGLI
Trigger: TATTAGGCCAGTTGAAGTGGAGTTATAGGATTTTCACACATTCACGCATACTTGGATATCAACCCTCTCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304623.13
3UTR TCA 72 bp ATAAAATGTGTAAGGAAACGGACCTGTAGAGAGGGTTaGTATCCAAGTATGCGTGAATGTGTGAAAATCCTA +
Preference number: 3 (lower is better)
Translates to: IKCVRKRTCREG*YPSMRECVKIL
Trigger: TAGGATTTTCACACATTCACGCATACTTGGATATCAACCCTCTCTACAGGTCCGTTTCCTTACACATTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304623.13
3UTR CCA 72 bp ATATTTAGAACCATAGATGAGGAAACACGGCGGCATTaGTGTAATATACACAACGCGCTTTTCTTCTTTAAT +
Preference number: 3 (lower is better)
Translates to: IFRTIDEETRRH*CNIHNALFFFN
Trigger: ATTAAAGAAGAAAAGCGCGTTGTGTATATTACACCAATGCCGCCGTGTTTCCTCATCTATGGTTCTAAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304623.13
CDS-3UTR CCA 90 bp GGCATAGCTGGCCCTCTGGAAGGTGGCCGCGGCGGCATTCTGTGGGCCGTGCTGCGGGACAAGGGATGCTaGCGGGCGGCAGGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: GIAGPLEGGRGGILWAVLRDKGC*RAAGAS
Trigger: GCTCGCCCCTGCCGCCCGCCAGCATCCCTTGTCCCG...CAGCACGGCCCACAGAATGCCGCCGCGGCCACCTTCCAGAGGGCCAGCTATGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR CCA 90 bp GGCATAGCTGGCCCTCTGGAAGGTGGCCGCGGCGGCATTCTGTGGGCCGTGCTGCTGGCGGGAGGGCGATaGTGGACCTGGTCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: GIAGPLEGGRGGILWAVLLAGGR*WTWSSK
Trigger: CTTCGAGGACCAGGTCCACCATCGCCCTCCCGCCAG...CAGCACGGCCCACAGAATGCCGCCGCGGCCACCTTCCAGAGGGCCAGCTATGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR CCA 90 bp TTGCTGAGCGGTTGTTGGGAGACACGCGCACAGGGGAGATGGAGGGCGTGCGGGCGCGGCGGCATTCTGTaGGCCGTGCTGGCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: LLSGCWETRAQGRWRACGRGGIL*AVLAAC
Trigger: ACAGGCAGCCAGCACGGCCCACAGAATGCCGCCGCG...CCCGCACGCCCTCCATCTCCCCTGTGCGCGTGTCTCCCAACAACCGCTCAGCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR CCA 90 bp GGACTTGAGACCCAGGTGCATGGTGTACTCGCTGGCGGGAGGGCGATGGTGGACCGCGCACAGGGGAGATaGAGGGCGTGCGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GLETQVHGVLAGGRAMVDRAQGR*RACGRR
Trigger: CCTCCTCCCGCACGCCCTCCATCTCCCCTGTGCGCG...GTCCACCATCGCCCTCCCGCCAGCGAGTACACCATGCACCTGGGTCTCAAGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GGTCCGCGTAATTGGAGGCTGGGCCGGCGGCATAGCTGGCCCTCTGGAAGGTGGGGGCCCAGGTGCCCATaGTGGCTGCTGTATGAGGCT +
Preference number: 4 (lower is better)
Translates to: GPRNWRLGRRHSWPSGRWGPRCP*WLLYEA
Trigger: AGCCTCATACAGCAGCCAGCATGGGCACCTGGGCCC...CCACCTTCCAGAGGGCCAGCTATGCCGCCGGCCCAGCCTCCAATTACGCGGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR GCA 90 bp AGGTGCATGGTGTACTCGCTGGCGGGAGGGCGATGGTGGACCTGGTCCTCGAAGGTAGGTGCCGGTGTGTaGTGGCGGCAGAGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: RCMVYSLAGGRWWTWSSKVGAGV*WRQRVP
Trigger: GGGGACCCTCTGCCGCCAGCACACACCGGCACCTAC...CTTCGAGGACCAGGTCCACCATCGCCCTCCCGCCAGCGAGTACACCATGCACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CCAGGTGCATGGTGTACTCGCTGGCGGGAGGGCGATGGTGGACCTGGTCCTCGATGCTCGTGCGGTAGGTaGCGGTGTGTGCTGGCGGCA +
Preference number: 4 (lower is better)
Translates to: PGAWCTRWREGDGGPGPRCSCGR*RCVLAA
Trigger: TGCCGCCAGCACACACCGGCACCTACCGCACGAGCA...TCGAGGACCAGGTCCACCATCGCCCTCCCGCCAGCGAGTACACCATGCACCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
3UTR CAA 72 bp CGCAGCGCAGTGGCCACCGCGCACACCACACGGTCATaGTCTATTCGGAGCAGCTCCACGAGGATGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RSAVATAHTTRS*SIRSSSTRMGR
Trigger: CCTGCCCATCCTCGTGGAGCTGCTCCGAATAGACAATGACCGTGTGGTGTGCGCGGTGGCCACTGCGCTGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR GCA 90 bp ACTCGCTGGCGGGAGGGCGATGGTGGACCTGGTCCTCGAAGAAGGACTCATCGTTGCTCGTGCGGTAGGTaGCGGTGTGTGCTGGCGGCA +
Preference number: 4 (lower is better)
Translates to: TRWREGDGGPGPRRRTHRCSCGR*RCVLAA
Trigger: TGCCGCCAGCACACACCGGCACCTACCGCACGAGCA...ACGATGAGTCCTTCTTCGAGGACCAGGTCCACCATCGCCCTCCCGCCAGCGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GTGTACTCGCTGGCGGGAGGGCGATGGTGGACCTGGTCCTCGAAGAAGGACTCAGGGAAGATGGGGCTGTaGTCGTGCGGTAGGTGCCGG +
Preference number: 4 (lower is better)
Translates to: VYSLAGGRWWTWSSKKDSGKMGL*SCGRCR
Trigger: CCGGCACCTACCGCACGAGCACAGCCCCATCTTCCC...TGAGTCCTTCTTCGAGGACCAGGTCCACCATCGCCCTCCCGCCAGCGAGTACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CTCCTCACACCCAGGAGTCGGGGGAGGCCGGGTAGTGGCTCGTTTCATAGTTCACCTGCAGCCAAGTTCTaGAGGGCGCCTGCCGCCCCT +
Preference number: 4 (lower is better)
Translates to: LLTPRSRGRPGSGSFHSSPAAKF*RAPAAP
Trigger: AGGGGCGGCAGGCGCCCTGCAGAACTTGGCTGCAGG...TGAACTATGAAACGAGCCACTACCCGGCCTCCCCCGACTCCTGGGTGTGAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TTGCTGAGCGGTTGTTGGGAGACACGCGCACAGGGGAGATGGAGGGCGTGCGGGGGTAGGTGGCGTTGCTaGCGGTGCACTCGTAGTCTG +
Preference number: 4 (lower is better)
Translates to: LLSGCWETRAQGRWRACGGRWRC*RCTRSL
Trigger: CAGACTACGAGTGCACCGGCAGCAACGCCACCTACC...CCCGCACGCCCTCCATCTCCCCTGTGCGCGTGTCTCCCAACAACCGCTCAGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR CCA 90 bp ATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCGCGCTGCAGCTTGGTaGGCGAACCGCCCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: MSCGMHAHALFPERLCPARAAAW*ANRPGA
Trigger: CGCCCCAGGGCGGTTCGCCCACCAAGCTGCAGCGCG...AGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CCA 90 bp AGGTGCATGGTGTACTCGCTGGCGGGAGGGCGATGGTGGACCTGGTCCTCGAAGGGCTCGGGAACCAGCTaGCTGAAGCTCTGGCCCGTA +
Preference number: 4 (lower is better)
Translates to: RCMVYSLAGGRWWTWSSKGSGTS*LKLWPV
Trigger: TACGGGCCAGAGCTTCAGCCAGCTGGTTCCCGAGCC...CTTCGAGGACCAGGTCCACCATCGCCCTCCCGCCAGCGAGTACACCATGCACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR TCA 90 bp TGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCTCGGGCCGGGAGCTGTaGAGGGGTGGTTTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: CLVVCMHMHCSRSACALLSGREL*RGGFPQ
Trigger: CTGGGGGAAACCACCCCTTCACAGCTCCCGGCCCGA...GAGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
CDS-3UTR GCA 90 bp TGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCAACCAGCTGCCAGGCTaGCCGGCCTCTGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: CLVVCMHMHCSRSACALLNQLPG*PASGGW
Trigger: CCACCCTCCAGAGGCCGGGCAGCCTGGCAGCTGGTT...GAGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR GCA 90 bp CTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCCTCGTGGCTCGGGAACCAGCTaGCAGGCTGCCCGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LCLVLNDNPYAPPARMPRGSGTS*QAARPL
Trigger: CAGAGGCCGGGCAGCCTGGCAGCTGGTTCCCGAGCC...ACGAGGCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR GCA 90 bp AGGTGCATGGTGTACTCGCTGGCGGGAGGGCGATGGTGGACCTGGTCCTCGAAGGGTGCCCATGCTGGCTaGTGTATGAGGCTCGGGAAC +
Preference number: 4 (lower is better)
Translates to: RCMVYSLAGGRWWTWSSKGAHAG*CMRLGN
Trigger: GTTCCCGAGCCTCATACAGCAGCCAGCATGGGCACC...CTTCGAGGACCAGGTCCACCATCGCCCTCCCGCCAGCGAGTACACCATGCACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CTCCTCACACCCAGGAGTCGGGGGAGGCCGGGTAGTGGCTCGTTTCATAGTTCAGGGAAGATGGGGCTGTaGTCGTGCGGTAGGTGCCGG +
Preference number: 4 (lower is better)
Translates to: LLTPRSRGRPGSGSFHSSGKMGL*SCGRCR
Trigger: CCGGCACCTACCGCACGAGCACAGCCCCATCTTCCC...TGAACTATGAAACGAGCCACTACCCGGCCTCCCCCGACTCCTGGGTGTGAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GGACTTGAGACCCAGGTGCATGGTGTACTCGCTGGCGGGAGGGCGATGGTGGACCCACTTCCAGCTCCCTaGAGCCAAGTTCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GLETQVHGVLAGGRAMVDPLPAP*SQVLQG
Trigger: GCCCTGCAGAACTTGGCTGCAGGGAGCTGGAAGTGG...GTCCACCATCGCCCTCCCGCCAGCGAGTACACCATGCACCTGGGTCTCAAGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR CCA 90 bp CTCCTCACACCCAGGAGTCGGGGGAGGCCGGGTAGTGGCTCGTTTCATAGTTCAGGAGCTGTGAAGGGGTaGTTTCCCCCAGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LLTPRSRGRPGSGSFHSSGAVKG*FPPGPG
Trigger: CCCTGGCCCTGGGGGAAACCACCCCTTCACAGCTCC...TGAACTATGAAACGAGCCACTACCCGGCCTCCCCCGACTCCTGGGTGTGAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR CCA 90 bp GTGTACTCGCTGGCGGGAGGGCGATGGTGGACCTGGTCCTCGAAGAAGGACTCAGGGTCCCCCTGGCTCTaGCTGAGACTCCTCATAGGG +
Preference number: 4 (lower is better)
Translates to: VYSLAGGRWWTWSSKKDSGSPWL*LRLLIG
Trigger: CCCTATGAGGAGTCTCAGCCAGAGCCAGGGGGACCC...TGAGTCCTTCTTCGAGGACCAGGTCCACCATCGCCCTCCCGCCAGCGAGTACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCGGCCGGCGGCATAGCTaGCCCTCTGGAAGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: NVLWYACTCTVPGAPVPCGRRHS*PSGRWP
Trigger: CGGCCACCTTCCAGAGGGCCAGCTATGCCGCCGGCC...GCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp ATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTGGCCGGCGGCATAGCTaGCCCTCTGGAAGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: MSCGMHAHALFPERLCPAGRRHS*PSGRWP
Trigger: CGGCCACCTTCCAGAGGGCCAGCTATGCCGCCGGCC...AGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp ATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCGCGCACAGGGGAGATaGAGGGCGTGCGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: MSCGMHAHALFPERLCPARAQGR*RACGRR
Trigger: CCTCCTCCCGCACGCCCTCCATCTCCCCTGTGCGCG...AGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGGGCTCGGGAACCAGCTaGCAGGCTGCCCGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: KCLVVCMHMHCSRSACALGSGTS*QAARPL
Trigger: CAGAGGCCGGGCAGCCTGGCAGCTGGTTCCCGAGCC...CAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR GCA 90 bp ATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTGTAGGTGCCGGTGTGTaGTGGCGGCAGAGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: MSCGMHAHALFPERLCPAVGAGV*WRQRVP
Trigger: GGGGACCCTCTGCCGCCAGCACACACCGGCACCTAC...AGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCGTGGGCCGTGCTGGCTaGCTGTGCGCTGCAAGGGGA +
Preference number: 4 (lower is better)
Translates to: NVLWYACTCTVPGAPVPCVGRAG*LCAARG
Trigger: TCCCCTTGCAGCGCACAGGCAGCCAGCACGGCCCAC...GCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp ATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCCTGCAGCCAAGTTCTaGAGGGCGCCTGCCGCCCCT +
Preference number: 4 (lower is better)
Translates to: MSCGMHAHALFPERLCPAPAAKF*RAPAAP
Trigger: AGGGGCGGCAGGCGCCCTGCAGAACTTGGCTGCAGG...AGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp ACTCGCTGGCGGGAGGGCGATGGTGGACCTGGTCCTCGAAGAAGGACTCATCGTCGTGGTAGGTGGCGTTaGTGCCGGTGCACTCGTAGT +
Preference number: 4 (lower is better)
Translates to: TRWREGDGGPGPRRRTHRRGRWR*CRCTRS
Trigger: ACTACGAGTGCACCGGCAGCAACGCCACCTACCACG...ACGATGAGTCCTTCTTCGAGGACCAGGTCCACCATCGCCCTCCCGCCAGCGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TCGTTGGCCTTCCCATACACCAGGTTTCTCAGAGCTCCACAGGCACTACGGTGGCAGGGCCCGCAACTCTaGGCCCAGGTGCCCATGCTG +
Preference number: 4 (lower is better)
Translates to: SLAFPYTRFLRAPQALRWQGPQL*AQVPML
Trigger: CAGCATGGGCACCTGGGCCCAGAGTTGCGGGCCCTG...CCACCGTAGTGCCTGTGGAGCTCTGAGAAACCTGGTGTATGGGAAGGCCAACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR CCA 90 bp AATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCCGCGGCGGCATTCTGTaGGCCGTGCTGGCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: NVLWYACTCTVPGAPVPCRGGIL*AVLAAC
Trigger: ACAGGCAGCCAGCACGGCCCACAGAATGCCGCCGCG...GCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GGAGGCCGGGTAGTGGCTCGTTTCATAGTTCAGTTCACTGTAGGGACGGGCAGCAGGGGTCCGCGTAATTaGAGGCTGGGCCGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: GGRVVARFIVQFTVGTGSRGPRN*RLGRRH
Trigger: ATGCCGCCGGCCCAGCCTCCAATTACGCGGACCCCT...GCTGCCCGTCCCTACAGTGAACTGAACTATGAAACGAGCCACTACCCGGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR TCA 90 bp CCAGGTGCATGGTGTACTCGCTGGCGGGAGGGCGATGGTGGACCTGGTCCTCGAAGAGTAAACAAAGCGTaGGAAGCCGTCCCCCACACA +
Preference number: 4 (lower is better)
Translates to: PGAWCTRWREGDGGPGPRRVNKA*EAVPHT
Trigger: TGTGTGGGGGACGGCTTCTCACGCTTTGTTTACTCT...TCGAGGACCAGGTCCACCATCGCCCTCCCGCCAGCGAGTACACCATGCACCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513588.5
CDS-3UTR GCA 90 bp GGTCCGCGTAATTGGAGGCTGGGCCGGCGGCATAGCTGGCCCTCTGGAAGGTGGCTTCTGCTGAACTCATaGTGCTCATGCTGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: GPRNWRLGRRHSWPSGRWLLLNS*CSCCQS
Trigger: AGACTGGCAGCATGAGCAGCATGAGTTCAGCAGAAG...CCACCTTCCAGAGGGCCAGCTATGCCGCCGGCCCAGCCTCCAATTACGCGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR GCA 90 bp GAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGTAGGTGCCGGTGTGTaGTGGCGGCAGAGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: EMSCGMHAHALFPERLCPVGAGV*WRQRVP
Trigger: GGGGACCCTCTGCCGCCAGCACACACCGGCACCTAC...AGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp ATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTTGCTCGTGCGGTAGGTaGCGGTGTGTGCTGGCGGCA +
Preference number: 4 (lower is better)
Translates to: MSCGMHAHALFPERLCPACSCGR*RCVLAA
Trigger: TGCCGCCAGCACACACCGGCACCTACCGCACGAGCA...AGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGGTGGGCCGTGCTGGCTaGCTGTGCGCTGCAAGGGGA +
Preference number: 4 (lower is better)
Translates to: KCLVVCMHMHCSRSACALVGRAG*LCAARG
Trigger: TCCCCTTGCAGCGCACAGGCAGCCAGCACGGCCCAC...CAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TCGTTGGCCTTCCCATACACCAGGTTTCTCAGAGCTCCACAGGCACTACGGTGGGGGACCTGGCCAAGGTaGCTTCAGGCGGGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: SLAFPYTRFLRAPQALRWGTWPR*LQAGEQ
Trigger: CTGCTCTCCCGCCTGAAGGCACCTTGGCCAGGTCCC...CCACCGTAGTGCCTGTGGAGCTCTGAGAAACCTGGTGTATGGGAAGGCCAACGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR GCA 90 bp AGTGTGCAGCAGACAGCTGTCACTGTGTCATCCGACATGGCCTTGCTTGCAGTGGTTCTGCAGGGCGCCTaGCGCCCCTTCCAGCGTGTC +
Preference number: 4 (lower is better)
Translates to: SVQQTAVTVSSDMALLAVVLQGA*RPFQRV
Trigger: GACACGCTGGAAGGGGCGGCAGGCGCCCTGCAGAAC...CACTGCAAGCAAGGCCATGTCGGATGACACAGTGACAGCTGTCTGCTGCACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR GCA 90 bp ACCGGCCCGAATGCCTCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGCACGTTCTGCAGGGCGCCTaGCGCCCCTTCCAGCGTGTC +
Preference number: 4 (lower is better)
Translates to: TGPNASSLLPSTTFSIKHVLQGA*RPFQRV
Trigger: GACACGCTGGAAGGGGCGGCAGGCGCCCTGCAGAAC...GTGCTTTATACTGAACGTGGTTGATGGGAGGAGAGACGAGGCATTCGGGCCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AGTGTGCAGCAGACAGCTGTCACTGTGTCATCCGACATGGCCTTGCTTGCAGTGCCTGCAGCCAAGTTCTaGAGGGCGCCTGCCGCCCCT +
Preference number: 4 (lower is better)
Translates to: SVQQTAVTVSSDMALLAVPAAKF*RAPAAP
Trigger: AGGGGCGGCAGGCGCCCTGCAGAACTTGGCTGCAGG...CACTGCAAGCAAGGCCATGTCGGATGACACAGTGACAGCTGTCTGCTGCACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR GCA 90 bp AGGGCGCCTGCCGCCCCTTCCAGCGTGTCTGGATTTGAGCACTCAGAGAGCAGTCGACCAACTTCTCGATaGCACCGGCATCCCGTAAGG +
Preference number: 4 (lower is better)
Translates to: RAPAAPSSVSGFEHSESSRPTSR*HRHPVR
Trigger: CCTTACGGGATGCCGGTGGCATCGAGAAGTTGGTCG...ACTGCTCTCTGAGTGCTCAAATCCAGACACGCTGGAAGGGGCGGCAGGCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR GCA 90 bp AGGTGCATGGTGTACTCGCTGGCGGGAGGGCGATGGTGGACCTGGTCCTCGAAGTGGCGTTGCTGCCGGTaGACTCGTAGTCTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: RCMVYSLAGGRWWTWSSKWRCCR*TRSLFS
Trigger: GGAAAACAGACTACGAGTGCACCGGCAGCAACGCCA...CTTCGAGGACCAGGTCCACCATCGCCCTCCCGCCAGCGAGTACACCATGCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR GCA 90 bp ATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTGGAGCGCCTGTGCCCTaGTCCTCACACCCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: MSCGMHAHALFPERLCPAGAPVP*SSHPGV
Trigger: GACTCCTGGGTGTGAGGAGCAGGGCACAGGCGCTCC...AGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CCCACCGGCCCGAATGCCTCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGTGGTGGGCGACAGGGTaGCGTACGTGCCGATGGTGG +
Preference number: 4 (lower is better)
Translates to: PTGPNASSLLPSTTFSIKWWATG*RTCRWW
Trigger: CCACCATCGGCACGTACGCCACCCTGTCGCCCACCA...CTTTATACTGAACGTGGTTGATGGGAGGAGAGACGAGGCATTCGGGCCGGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CCA 90 bp CTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCCTCGTTACTGCTCGGACGCGTaGACCAGGCGCTTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: LCLVLNDNPYAPPARMPRYCSDA*TRRLVG
Trigger: GCCCACCAAGCGCCTGGTCCACGCGTCCGAGCAGTA...ACGAGGCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CCA 90 bp AATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCCCGGCCTCTGGAGGGTaGCCGTGGCATACAGCTCCT +
Preference number: 4 (lower is better)
Translates to: NVLWYACTCTVPGAPVPCPASGG*PWHTAP
Trigger: AGGAGCTGTATGCCACGGCCACCCTCCAGAGGCCGG...GCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CCA 90 bp TCACACCCAGGAGTCGGGGGAGGCCGGGTAGTGGCTCGTTTCATAGTTCAGTTCCCCAGGTGCCCATGCTaGCTGCTGTATGAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: SHPGVGGGRVVARFIVQFPRCPC*LLYEAR
Trigger: CCGAGCCTCATACAGCAGCCAGCATGGGCACCTGGG...GAACTGAACTATGAAACGAGCCACTACCCGGCCTCCCCCGACTCCTGGGTGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTCAGGGCCCGCAACTCTaGGCCCAGGTGCCCATGCTG +
Preference number: 4 (lower is better)
Translates to: EMSCGMHAHALFPERLCPQGPQL*AQVPML
Trigger: CAGCATGGGCACCTGGGCCCAGAGTTGCGGGCCCTG...AGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCGGGTCCCCCTGGCTCTaGCTGAGACTCCTCATAGGG +
Preference number: 4 (lower is better)
Translates to: CLVVCMHMHCSRSACALLGSPWL*LRLLIG
Trigger: CCCTATGAGGAGTCTCAGCCAGAGCCAGGGGGACCC...GAGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CCAGGTGCATGGTGTACTCGCTGGCGGGAGGGCGATGGTGGACCTGGTCCTCGATCTGAATGCTATCAATaGACGGGGACCTGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: PGAWCTRWREGDGGPGPRSECYQ*TGTWPR
Trigger: CCTTGGCCAGGTCCCCGTCCATTGATAGCATTCAGA...TCGAGGACCAGGTCCACCATCGCCCTCCCGCCAGCGAGTACACCATGCACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GGCCTCAGCCACTTGCATCTAAAGAGCAAAGCTAGTTTACCCGCGGCCCATGTTCGCGCACAGGGGAGATaGAGGGCGTGCGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GLSHLHLKSKASLPAAHVRAQGR*RACGRR
Trigger: CCTCCTCCCGCACGCCCTCCATCTCCCCTGTGCGCG...AACATGGGCCGCGGGTAAACTAGCTTTGCTCTTTAGATGCAAGTGGCTGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304623.13
CDS-3UTR CCA 90 bp CGCTGGCGGGAGGGCGATGGTGGACCTGGTCCTCGAAGAAGGACTCATCGTAATTTGCTGAGCGGTTGTTaGGAGACACGCGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: RWREGDGGPGPRRRTHRNLLSGC*ETRAQG
Trigger: CCCCTGTGCGCGTGTCTCCCAACAACCGCTCAGCAA...ATTACGATGAGTCCTTCTTCGAGGACCAGGTCCACCATCGCCCTCCCGCCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
3UTR CAA 72 bp CCTGTGACCAGCTCCCGGATCTCCAGGTCAGTCGTCTaGCGGAGTAACCTCACCAGTGCTGGGATGCCACCA +
Preference number: 4 (lower is better)
Translates to: PVTSSRISRSVV*RSNLTSAGMPP
Trigger: TGGTGGCATCCCAGCACTGGTGAGGTTACTCCGCAAGACGACTGACCTGGAGATCCGGGAGCTGGTCACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR TCA 90 bp CGCTGGCGGGAGGGCGATGGTGGACCTGGTCCTCGAAGAAGGACTCATCGTAATTCCAAAGGACTCCTGTaGCCAGCTCCCGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: RWREGDGGPGPRRRTHRNSKGLL*PAPGSP
Trigger: TGGAGATCCGGGAGCTGGTCACAGGAGTCCTTTGGA...ATTACGATGAGTCCTTCTTCGAGGACCAGGTCCACCATCGCCCTCCCGCCAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR TCA 90 bp CGGATCTCCAGGTCAGTCGTCTTGCGGAGTAACCTCACCAGTGCTGGGATGCCAATGCTGGCTGCTGTATaGGGCTCGGGAACCAGCTGG +
Preference number: 4 (lower is better)
Translates to: RISRSVVLRSNLTSAGMPMLAAV*GSGTSW
Trigger: CCAGCTGGTTCCCGAGCCTCATACAGCAGCCAGCAT...TGGCATCCCAGCACTGGTGAGGTTACTCCGCAAGACGACTGACCTGGAGATCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR GCA 90 bp TGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCGAGTGCTTGCTGTACTaGTCGGACGCGTGGACCAGG +
Preference number: 4 (lower is better)
Translates to: CLVVCMHMHCSRSACALLECLLY*SDAWTR
Trigger: CCTGGTCCACGCGTCCGAGCAGTACAGCAAGCACTC...GAGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR GCA 90 bp CCCACCGGCCCGAATGCCTCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGGGGCCCAGGTGCCCATaGTGGCTGCTGTATGAGGCT +
Preference number: 4 (lower is better)
Translates to: PTGPNASSLLPSTTFSIKGPRCP*WLLYEA
Trigger: AGCCTCATACAGCAGCCAGCATGGGCACCTGGGCCC...CTTTATACTGAACGTGGTTGATGGGAGGAGAGACGAGGCATTCGGGCCGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCCTCGTTGGTGTTCTGGGGACTaGAGGGCCCGCAACTCTGGG +
Preference number: 4 (lower is better)
Translates to: LCLVLNDNPYAPPARMPRWCSGD*RARNSG
Trigger: CCCAGAGTTGCGGGCCCTGCAGTCCCCAGAACACCA...ACGAGGCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGGGAAGATGGGGCTGTaGTCGTGCGGTAGGTGCCGG +
Preference number: 4 (lower is better)
Translates to: EMSCGMHAHALFPERLCPGKMGL*SCGRCR
Trigger: CCGGCACCTACCGCACGAGCACAGCCCCATCTTCCC...AGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GGACTTGAGACCCAGGTGCATGGTGTACTCGCTGGCGGGAGGGCGATGGTGGACGAGCAGGGCCGGATTTaGTGTATGGAGACTCAACAG +
Preference number: 4 (lower is better)
Translates to: GLETQVHGVLAGGRAMVDEQGRI*CMETQQ
Trigger: CTGTTGAGTCTCCATACAGCAAATCCGGCCCTGCTC...GTCCACCATCGCCCTCCCGCCAGCGAGTACACCATGCACCTGGGTCTCAAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCGTTCTGCAGGGCGCCTaGCGCCCCTTCCAGCGTGTC +
Preference number: 4 (lower is better)
Translates to: KKCLVVCMHMHCSRSACAVLQGA*RPFQRV
Trigger: GACACGCTGGAAGGGGCGGCAGGCGCCCTGCAGAAC...GGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TGCAGGGCGCCTGCCGCCCCTTCCAGCGTGTCTGGATTTGAGCACTCAGAGAGCCTCAGATCTCGGTACTaGCACATGCTGTTGAGGACC +
Preference number: 4 (lower is better)
Translates to: CRAPAAPSSVSGFEHSESLRSRY*HMLLRT
Trigger: GGTCCTCAACAGCATGTGGCAGTACCGAGATCTGAG...GCTCTCTGAGTGCTCAAATCCAGACACGCTGGAAGGGGCGGCAGGCGCCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR GCA 90 bp TGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCGGTAGGTGGCGTTGCTaGCGGTGCACTCGTAGTCTG +
Preference number: 4 (lower is better)
Translates to: CLVVCMHMHCSRSACALLGRWRC*RCTRSL
Trigger: CAGACTACGAGTGCACCGGCAGCAACGCCACCTACC...GAGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGGAGCGCCTGTGCCCTaGTCCTCACACCCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: EMSCGMHAHALFPERLCPGAPVP*SSHPGV
Trigger: GACTCCTGGGTGTGAGGAGCAGGGCACAGGCGCTCC...AGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCCAGAGCCATCCCCGTTaGAGGTGTTTAAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: CLVVCMHMHCSRSACALLQSHPR*RCLSRG
Trigger: GCCCCGGCTTAAACACCTCCAACGGGGATGGCTCTG...GAGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CTCCTCACACCCAGGAGTCGGGGGAGGCCGGGTAGTGGCTCGTTTCATAGTTCAATCGCTCCAGCTGGCTaGCTACGATCTGCCGTTCAG +
Preference number: 4 (lower is better)
Translates to: LLTPRSRGRPGSGSFHSSIAPAG*LRSAVQ
Trigger: CTGAACGGCAGATCGTAGCCAGCCAGCTGGAGCGAT...TGAACTATGAAACGAGCCACTACCCGGCCTCCCCCGACTCCTGGGTGTGAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CTATTCTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCACTTGGCCAGGCGGCTaGGCGACTGCTTGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: LFCVLCLTITLTPHRPECTWPGG*ATAWAR
Trigger: CCTCGCCCAAGCAGTCGCCCAGCCGCCTGGCCAAGT...GCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAGAATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CCA 90 bp ACCGGCCCGAATGCCTCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGCACTGGGCGAGGAGGAGATaGTGGACTGCACGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: TGPNASSLLPSTTFSIKHWARRR*WTARWG
Trigger: CCCCCACCGTGCAGTCCACCATCTCCTCCTCGCCCA...GTGCTTTATACTGAACGTGGTTGATGGGAGGAGAGACGAGGCATTCGGGCCGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CCA 90 bp CTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCCTCGTCTCTCCATGGTGGAGCTCAGCTaGTGGATGGGCGAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: LVLNDNPYAPPARMPRLSMVELS*WMGEEE
Trigger: CTCCTCCTCGCCCATCCACCAGCTGAGCTCCACCAT...GGAGAGACGAGGCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CCA 90 bp TGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCGACACCAGGGGAAGATaGGGCTGTGCTCGTGCGGTA +
Preference number: 4 (lower is better)
Translates to: CLVVCMHMHCSRSACALLDTRGR*GCARAV
Trigger: TACCGCACGAGCACAGCCCCATCTTCCCCTGGTGTC...GAGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGGGCCGGCGGCATAGCTaGCCCTCTGGAAGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: ERNVLWYACTCTVPGAPVGRRHS*PSGRWP
Trigger: CGGCCACCTTCCAGAGGGCCAGCTATGCCGCCGGCC...CACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCTCCTTAGGCACCCGGTaGCGTTACGCAGCACCTGTG +
Preference number: 4 (lower is better)
Translates to: CLVVCMHMHCSRSACALLSLGTR*RYAAPV
Trigger: CACAGGTGCTGCGTAACGCCACCGGGTGCCTAAGGA...GAGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGTTCCGCAGCGCAGTaGCCACCGCGCACACCACAC +
Preference number: 4 (lower is better)
Translates to: RNVLWYACTCTVPGAPVPCSAAQ*PPRTPH
Trigger: GTGTGGTGTGCGCGGTGGCCACTGCGCTGCGGAACA...GGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GCTGTCGGTAGGGGTCCGCGTAATTGGAGGCTGGGCCGGCGGCATAGCTGGCCCGGCTGTGCTGAAACCTaGTTGTGTTTGATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: AVGRGPRNWRLGRRHSWPGCAET*LCLMSS
Trigger: TGAAGACATCAAACACAACCAGGTTTCAGCACAGCC...GGGCCAGCTATGCCGCCGGCCCAGCCTCCAATTACGCGGACCCCTACCGACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR CCA 90 bp AAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTGGCGGGAGGGCGATaGTGGACCTGGTCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: KCLVVCMHMHCSRSACALLAGGR*WTWSSK
Trigger: CTTCGAGGACCAGGTCCACCATCGCCCTCCCGCCAG...CAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp TGCAGGGCGCCTGCCGCCCCTTCCAGCGTGTCTGGATTTGAGCACTCAGAGAGCGTAATTCCTGTTCTTTaGCTGAGGCGAGGATGGCAG +
Preference number: 4 (lower is better)
Translates to: CRAPAAPSSVSGFEHSESVIPVL*LRRGWQ
Trigger: CTGCCATCCTCGCCTCAGTCAAAGAACAGGAATTAC...GCTCTCTGAGTGCTCAAATCCAGACACGCTGGAAGGGGCGGCAGGCGCCCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR TCA 90 bp GTGTGTGCTGGCGGCAGAGGGTCCCCCTGGCTCTGGCTGAGACTCCTCATAGGGAAACTGCTCTTCTGCTaGACTCATGCTGCTCATGCT +
Preference number: 4 (lower is better)
Translates to: VCAGGRGSPWLWLRLLIGKLLFC*THAAHA
Trigger: AGCATGAGCAGCATGAGTTCAGCAGAAGAGCAGTTT...CCCTATGAGGAGTCTCAGCCAGAGCCAGGGGGACCCTCTGCCGCCAGCACACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR TCA 90 bp AAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCTCGGGCCGGGAGCTGTaGAGGGGTGGTTTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: KEMSCGMHAHALFPERLCSGREL*RGGFPQ
Trigger: CTGGGGGAAACCACCCCTTCACAGCTCCCGGCCCGA...GCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
CDS-3UTR TCA 90 bp GATCCAACAGGTCCACCAGGAGCTGGATGCCTCCTTGTCTCCTTATCTCGGCTTCCCATGTGCTGTCCCTaGGACGTTTCTGCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: DPTGPPGAGCLLVSLSRLPMCCP*DVSAAS
Trigger: GCTGGCGGCAGAAACGTCTCAGGGACAGCACATGGG...AAGCCGAGATAAGGAGACAAGGAGGCATCCAGCTCCTGGTGGACCTGTTGGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR TCA 90 bp GGTCCGCGTAATTGGAGGCTGGGCCGGCGGCATAGCTGGCCCTCTGGAAGGTGGCCTACTCCATCCCACTaGTCTTGGGATTTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: GPRNWRLGRRHSWPSGRWPTPSH*SWDFFF
Trigger: GAAAAAGAAATCCCAAGATCAGTGGGATGGAGTAGG...CCACCTTCCAGAGGGCCAGCTATGCCGCCGGCCCAGCCTCCAATTACGCGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR TCA 90 bp ACTCGCTGGCGGGAGGGCGATGGTGGACCTGGTCCTCGAAGAAGGACTCATCGTAAACCTGGTTGTGTTTaGTGTCTTCAGCGGGCGCAC +
Preference number: 4 (lower is better)
Translates to: TRWREGDGGPGPRRRTHRKPGCV*CLQRAH
Trigger: GTGCGCCCGCTGAAGACATCAAACACAACCAGGTTT...ACGATGAGTCCTTCTTCGAGGACCAGGTCCACCATCGCCCTCCCGCCAGCGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GTTCACTGTAGGGACGGGCAGCTGAGTAGAAGTCAACGTAGTTGCCGGTGGACTGCTTCCTCGCAAACATaGACCCTCCGCCGGCGACAG +
Preference number: 4 (lower is better)
Translates to: VHCRDGQLSRSQRSCRWTASSQT*TLRRRQ
Trigger: CTGTCGCCGGCGGAGGGTGCATGTTTGCGAGGAAGC...AGTCCACCGGCAACTACGTTGACTTCTACTCAGCTGCCCGTCCCTACAGTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCTGGCTGGCTACGATCTaGCGTTCAGCCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: CLVVCMHMHCSRSACALLWLATI*RSASSS
Trigger: AGAGCTGGAGGCTGAACGGCAGATCGTAGCCAGCCA...GAGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TCACACCCAGGAGTCGGGGGAGGCCGGGTAGTGGCTCGTTTCATAGTTCAGTTCTGGCTGGCTACGATCTaGCGTTCAGCCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: SHPGVGGGRVVARFIVQFWLATI*RSASSS
Trigger: AGAGCTGGAGGCTGAACGGCAGATCGTAGCCAGCCA...GAACTGAACTATGAAACGAGCCACTACCCGGCCTCCCCCGACTCCTGGGTGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CCCCAATGCAACCTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCGCCGAGCCGCCGCGCTaGAGCTTGGTGGGCGAACCG +
Preference number: 4 (lower is better)
Translates to: PQCNLKPRVTTDEESKQSAEPPR*SLVGEP
Trigger: CGGTTCGCCCACCAAGCTGCAGCGCGGCGGCTCGGC...GCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAGGTTGCATTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR GCA 90 bp GAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGGGCCCAGGTGCCCATaGTGGCTGCTGTATGAGGCT +
Preference number: 4 (lower is better)
Translates to: EMSCGMHAHALFPERLCPGPRCP*WLLYEA
Trigger: AGCCTCATACAGCAGCCAGCATGGGCACCTGGGCCC...AGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTTGGTGTTCTGGGGACTaGAGGGCCCGCAACTCTGGG +
Preference number: 4 (lower is better)
Translates to: EMSCGMHAHALFPERLCPWCSGD*RARNSG
Trigger: CCCAGAGTTGCGGGCCCTGCAGTCCCCAGAACACCA...AGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CCCACCGGCCCGAATGCCTCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGCCACTTCCAGCTCCCTaGAGCCAAGTTCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: PTGPNASSLLPSTTFSIKPLPAP*SQVLQG
Trigger: GCCCTGCAGAACTTGGCTGCAGGGAGCTGGAAGTGG...CTTTATACTGAACGTGGTTGATGGGAGGAGAGACGAGGCATTCGGGCCGGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
CDS-3UTR GCA 90 bp GTGTACTCGCTGGCGGGAGGGCGATGGTGGACCTGGTCCTCGAAGAAGGACTCATCACTTCGTGCAGTGTaGAGCAGACAGCTGTCACTG +
Preference number: 4 (lower is better)
Translates to: VYSLAGGRWWTWSSKKDSSLRAV*SRQLSL
Trigger: CAGTGACAGCTGTCTGCTGCACACTGCACGAAGTGA...TGAGTCCTTCTTCGAGGACCAGGTCCACCATCGCCCTCCCGCCAGCGAGTACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR GCA 90 bp ATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCGTGGTAGGTGGCGTTaGTGCCGGTGCACTCGTAGT +
Preference number: 4 (lower is better)
Translates to: MSCGMHAHALFPERLCPARGRWR*CRCTRS
Trigger: ACTACGAGTGCACCGGCAGCAACGCCACCTACCACG...AGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCGACTTGAGACCCAGGTaGATGGTGTACTCGCTGGCG +
Preference number: 4 (lower is better)
Translates to: CLVVCMHMHCSRSACALLDLRPR*MVYSLA
Trigger: CGCCAGCGAGTACACCATGCACCTGGGTCTCAAGTC...GAGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GGCCTCAGCCACTTGCATCTAAAGAGCAAAGCTAGTTTACCCGCGGCCCATGTTGGAGCGCCTGTGCCCTaGTCCTCACACCCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: GLSHLHLKSKASLPAAHVGAPVP*SSHPGV
Trigger: GACTCCTGGGTGTGAGGAGCAGGGCACAGGCGCTCC...AACATGGGCCGCGGGTAAACTAGCTTTGCTCTTTAGATGCAAGTGGCTGAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304623.13
CDS-3UTR GCA 90 bp AAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCGGAGCGCCTGTGCCCTaGTCCTCACACCCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: KKCLVVCMHMHCSRSACAGAPVP*SSHPGV
Trigger: GACTCCTGGGTGTGAGGAGCAGGGCACAGGCGCTCC...GGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CAGCAGACAGCTGTCACTGTGTCATCCGACATGGCCTTGCTTGCAGTGTTGTTGGGAGCGCCTGTGCCCTaGTCCTCACACCCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: QQTAVTVSSDMALLAVLLGAPVP*SSHPGV
Trigger: GACTCCTGGGTGTGAGGAGCAGGGCACAGGCGCTCC...CAACAACACTGCAAGCAAGGCCATGTCGGATGACACAGTGACAGCTGTCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR GCA 90 bp GAGGGCGATGGTGGACCTGGTCCTCGAAGAAGGACTCATCGTAATTTCTTGTGGTTCCCGGAGCGCCTGTaGCCTGCTCCTCACACCCAG +
Preference number: 4 (lower is better)
Translates to: EGDGGPGPRRRTHRNFLWFPERL*PAPHTQ
Trigger: CTGGGTGTGAGGAGCAGGGCACAGGCGCTCCGGGAA...CCACAAGAAATTACGATGAGTCCTTCTTCGAGGACCAGGTCCACCATCGCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CGCTGGCGGGAGGGCGATGGTGGACCTGGTCCTCGAAGAAGGACTCATCGTAATTGGTATGCATGCACATaGACTGTTCCCGGAGCGCCT +
Preference number: 4 (lower is better)
Translates to: RWREGDGGPGPRRRTHRNWYACT*TVPGAP
Trigger: AGGCGCTCCGGGAACAGTGCATGTGCATGCATACCA...ATTACGATGAGTCCTTCTTCGAGGACCAGGTCCACCATCGCCCTCCCGCCAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AGTCGGGGGAGGCCGGGTAGTGGCTCGTTTCATAGTTCAGTTCACTGTAGGGACCAGAGCCATCCCCGTTaGAGGTGTTTAAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: SRGRPGSGSFHSSVHCRDQSHPR*RCLSRG
Trigger: GCCCCGGCTTAAACACCTCCAACGGGGATGGCTCTG...GTCCCTACAGTGAACTGAACTATGAAACGAGCCACTACCCGGCCTCCCCCGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCTTGCATCGCTCCAGCTaGCTGGCTACGATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: CLVVCMHMHCSRSACALLLHRSS*LATICR
Trigger: ACGGCAGATCGTAGCCAGCCAGCTGGAGCGATGCAA...GAGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGAAGCCGTGGCGCGTCGGGCAGGTaGAAGGCGCTGCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LKPRVTTDEESKQSVRSRGASGR*KALPRL
Trigger: CAGCCTGGGCAGCGCCTTCCACCTGCCCGACGCGCC...ACGGCTTCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CCA 90 bp AAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCGGGCAGCGTGGAGCTaGAGTAGTAGAGCGCGGCGG +
Preference number: 4 (lower is better)
Translates to: KEMSCGMHAHALFPERLCRAAWS*SSRARR
Trigger: CCGCCGCGCTCTACTACTCCAGCTCCACGCTGCCCG...GCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CCA 90 bp GAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGTGGTGGACTGCACGGTaGGGGGCGAGGTCACGCGGA +
Preference number: 4 (lower is better)
Translates to: ERNVLWYACTCTVPGAPVWWTAR*GARSRG
Trigger: TCCGCGTGACCTCGCCCCCCACCGTGCAGTCCACCA...CACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CCA 90 bp GTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGAAGCCGTCCCCCACACAGTGGACCAGGCGCTTGGTaGGCGACAGGGTGGCGTACG +
Preference number: 4 (lower is better)
Translates to: VTTDEESKQSVRSRPPHSGPGAW*ATGWRT
Trigger: CGTACGCCACCCTGTCGCCCACCAAGCGCCTGGTCC...ACTGTGTGGGGGACGGCTTCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CCA 90 bp CTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCCTCGTTCTGGAGGGTGGCCGTaGCATACAGCTCCTGCGAGT +
Preference number: 4 (lower is better)
Translates to: LCLVLNDNPYAPPARMPRSGGWP*HTAPAS
Trigger: ACTCGCAGGAGCTGTATGCCACGGCCACCCTCCAGA...ACGAGGCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CCA 90 bp AGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCCCCAGGTGCCCATGCTaGCTGCTGTATGAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: RNVLWYACTCTVPGAPVPPRCPC*LLYEAR
Trigger: CCGAGCCTCATACAGCAGCCAGCATGGGCACCTGGG...GGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCGGGTCCCCCTGGCTCTaGCTGAGACTCCTCATAGGG +
Preference number: 4 (lower is better)
Translates to: RNVLWYACTCTVPGAPVPGSPWL*LRLLIG
Trigger: CCCTATGAGGAGTCTCAGCCAGAGCCAGGGGGACCC...GGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CTATTCTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCTGGCCCTCTGGAAGGTaGCCGCGGCGGCATTCTGTG +
Preference number: 4 (lower is better)
Translates to: LFCVLCLTITLTPHRPECWPSGR*PRRHSV
Trigger: CACAGAATGCCGCCGCGGCCACCTTCCAGAGGGCCA...GCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAGAATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTCAATGGACGGGGACCTaGCCAAGGTGCCTTCAGGCG +
Preference number: 4 (lower is better)
Translates to: EMSCGMHAHALFPERLCPQWTGT*PRCLQA
Trigger: CGCCTGAAGGCACCTTGGCCAGGTCCCCGTCCATTG...AGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCCAATGGACGGGGACCTaGCCAAGGTGCCTTCAGGCG +
Preference number: 4 (lower is better)
Translates to: RNVLWYACTCTVPGAPVPQWTGT*PRCLQA
Trigger: CGCCTGAAGGCACCTTGGCCAGGTCCCCGTCCATTG...GGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CCCACCGGCCCGAATGCCTCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGTCCTTAGGCACCCGGTaGCGTTACGCAGCACCTGTG +
Preference number: 4 (lower is better)
Translates to: PTGPNASSLLPSTTFSIKSLGTR*RYAAPV
Trigger: CACAGGTGCTGCGTAACGCCACCGGGTGCCTAAGGA...CTTTATACTGAACGTGGTTGATGGGAGGAGAGACGAGGCATTCGGGCCGGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCCTCCCCAGCGCAGACTaGATCACGTACAGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: CLVVCMHMHCSRSACALLLPSAD*ITYSKA
Trigger: TGCCTTGCTGTACGTGATCCAGTCTGCGCTGGGGAG...GAGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TCACACCCAGGAGTCGGGGGAGGCCGGGTAGTGGCTCGTTTCATAGTTCAGTTCCTCCCCAGCGCAGACTaGATCACGTACAGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: SHPGVGGGRVVARFIVQFLPSAD*ITYSKA
Trigger: TGCCTTGCTGTACGTGATCCAGTCTGCGCTGGGGAG...GAACTGAACTATGAAACGAGCCACTACCCGGCCTCCCCCGACTCCTGGGTGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GGAGGCCGGGTAGTGGCTCGTTTCATAGTTCAGTTCACTGTAGGGACGGGCAGCCAGCATCCTTGCCATTaGCCTCGCCACAGAGTAGCC +
Preference number: 4 (lower is better)
Translates to: GGRVVARFIVQFTVGTGSQHPCH*PRHRVA
Trigger: GGCTACTCTGTGGCGAGGCCAATGGCAAGGATGCTG...GCTGCCCGTCCCTACAGTGAACTGAACTATGAAACGAGCCACTACCCGGCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CCCACCGGCCCGAATGCCTCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGTTGCTGAGCGGTTGTTaGGAGACACGCGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: PTGPNASSLLPSTTFSIKLLSGC*ETRAQG
Trigger: CCCCTGTGCGCGTGTCTCCCAACAACCGCTCAGCAA...CTTTATACTGAACGTGGTTGATGGGAGGAGAGACGAGGCATTCGGGCCGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGGCGGGAGGGCGATGGTaGACCTGGTCCTCGAAGAAG +
Preference number: 4 (lower is better)
Translates to: KCLVVCMHMHCSRSACALAGGRW*TWSSKK
Trigger: CTTCTTCGAGGACCAGGTCCACCATCGCCCTCCCGC...CAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GGTGCCACAGCATCTGGATCCCTTTTGGTGGTTCAGCACAGTCTGGAAGAGGTCGCGGGAGGGCGATGGTaGACCTGGTCCTCGAAGAAG +
Preference number: 4 (lower is better)
Translates to: GATASGSLLVVQHSLEEVAGGRW*TWSSKK
Trigger: CTTCTTCGAGGACCAGGTCCACCATCGCCCTCCCGC...GACCTCTTCCAGACTGTGCTGAACCACCAAAAGGGATCCAGATGCTGTGGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR TCA 90 bp GAGGGCGATGGTGGACCTGGTCCTCGAAGAAGGACTCATCGTAATTTCTTGTGGTCCGCTTTTGTTGTCTaGGCGCGGCCGCGGGACAAG +
Preference number: 4 (lower is better)
Translates to: EGDGGPGPRRRTHRNFLWSAFVV*ARPRDK
Trigger: CTTGTCCCGCGGCCGCGCTCAGACAACAAAAGCGGA...CCACAAGAAATTACGATGAGTCCTTCTTCGAGGACCAGGTCCACCATCGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR TCA 90 bp GTGTGTGCTGGCGGCAGAGGGTCCCCCTGGCTCTGGCTGAGACTCCTCATAGGGTTTTTGACCATCTTGTaGCTGCCACTGAAACTGCTC +
Preference number: 4 (lower is better)
Translates to: VCAGGRGSPWLWLRLLIGFLTIL*LPLKLL
Trigger: GAGCAGTTTCAGTGGCAGTCACAAGATGGTCAAAAA...CCCTATGAGGAGTCTCAGCCAGAGCCAGGGGGACCCTCTGCCGCCAGCACACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR TCA 90 bp AAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCCCATGTGCTGTCCCTaGGACGTTTCTGCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: KKCLVVCMHMHCSRSACAPMCCP*DVSAAS
Trigger: GCTGGCGGCAGAAACGTCTCAGGGACAGCACATGGG...GGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp GGGAGGGCGATGGTGGACCTGGTCCTCGAAGAAGGACTCATCGTAATTTCTTGTCCCATGTGCTGTCCCTaGGACGTTTCTGCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: GRAMVDLVLEEGLIVISCPMCCP*DVSAAS
Trigger: GCTGGCGGCAGAAACGTCTCAGGGACAGCACATGGG...ACAAGAAATTACGATGAGTCCTTCTTCGAGGACCAGGTCCACCATCGCCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCCTCGTCTCTCCTCATGCTGCTCATGCTaGCAGTCTCGGATCCGAGCT +
Preference number: 4 (lower is better)
Translates to: LVLNDNPYAPPARMPRLSSCCSC*QSRIRA
Trigger: AGCTCGGATCCGAGACTGGCAGCATGAGCAGCATGA...GGAGAGACGAGGCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TCACACCCAGGAGTCGGGGGAGGCCGGGTAGTGGCTCGTTTCATAGTTCAGTTCTCATGCTGCTCATGCTaGCAGTCTCGGATCCGAGCT +
Preference number: 4 (lower is better)
Translates to: SHPGVGGGRVVARFIVQFSCCSC*QSRIRA
Trigger: AGCTCGGATCCGAGACTGGCAGCATGAGCAGCATGA...GAACTGAACTATGAAACGAGCCACTACCCGGCCTCCCCCGACTCCTGGGTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GTTCACTGTAGGGACGGGCAGCTGAGTAGAAGTCAACGTAGTTGCCGGTGGACTGGGCCAGGGTCTGGTTaGTATGGTAGCTGGCCGGAT +
Preference number: 4 (lower is better)
Translates to: VHCRDGQLSRSQRSCRWTGPGSG*YGSWPD
Trigger: ATCCGGCCAGCTACCATAGCAACCAGACCCTGGCCC...AGTCCACCGGCAACTACGTTGACTTCTACTCAGCTGCCCGTCCCTACAGTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR GCA 90 bp ACCGGCCCGAATGCCTCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGCACGCTCCTGCGAGTGCTTaGTGTACTGCTCGGACGCGT +
Preference number: 4 (lower is better)
Translates to: TGPNASSLLPSTTFSIKHAPASA*CTARTR
Trigger: ACGCGTCCGAGCAGTACAGCAAGCACTCGCAGGAGC...GTGCTTTATACTGAACGTGGTTGATGGGAGGAGAGACGAGGCATTCGGGCCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR GCA 90 bp GAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGGTGCCCATGCTGGCTaGTGTATGAGGCTCGGGAAC +
Preference number: 4 (lower is better)
Translates to: EMSCGMHAHALFPERLCPGAHAG*CMRLGN
Trigger: GTTCCCGAGCCTCATACAGCAGCCAGCATGGGCACC...AGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCGTGGGCCGTGCTGGCTaGCTGTGCGCTGCAAGGGGA +
Preference number: 4 (lower is better)
Translates to: NRKKCLVVCMHMHCSRSAVGRAG*LCAARG
Trigger: TCCCCTTGCAGCGCACAGGCAGCCAGCACGGCCCAC...GGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGGGGACCTGGCCAAGGTaGCTTCAGGCGGGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: ERNVLWYACTCTVPGAPVGTWPR*LQAGEQ
Trigger: CTGCTCTCCCGCCTGAAGGCACCTTGGCCAGGTCCC...CACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GGACTTGAGACCCAGGTGCATGGTGTACTCGCTGGCGGGAGGGCGATGGTGGACCGACATGGCCTTGCTTaGAGTGTTGTTGCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: GLETQVHGVLAGGRAMVDRHGLA*SVVAVV
Trigger: AACAACAGCAACAACACTGCAAGCAAGGCCATGTCG...GTCCACCATCGCCCTCCCGCCAGCGAGTACACCATGCACCTGGGTCTCAAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCCTCGTCTCTCCTGGCGTTGCTGCCGGTaGACTCGTAGTCTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: LVLNDNPYAPPARMPRLSWRCCR*TRSLFS
Trigger: GGAAAACAGACTACGAGTGCACCGGCAGCAACGCCA...GGAGAGACGAGGCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGTTCCCGGAGCGCCTGTaGCCTGCTCCTCACACCCAG +
Preference number: 4 (lower is better)
Translates to: ERNVLWYACTCTVPGAPVFPERL*PAPHTQ
Trigger: CTGGGTGTGAGGAGCAGGGCACAGGCGCTCCGGGAA...CACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AGAGCAAAGCTAGTTTACCCGCGGCCCATGTTCTTTTCGATGGTTAGCCTTATTCGGGACAAGGGATGCTaGCGGGCGGCAGGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: RAKLVYPRPMFFSMVSLIRDKGC*RAAGAS
Trigger: GCTCGCCCCTGCCGCCCGCCAGCATCCCTTGTCCCG...AATAAGGCTAACCATCGAAAAGAACATGGGCCGCGGGTAAACTAGCTTTGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304623.13
CDS-3UTR CCA 90 bp CTATTCTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCCCCTGGCTGAAGCTCTaGCCCGTAGCTCGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: LFCVLCLTITLTPHRPECPWLKL*PVARAC
Trigger: ACAAGCCCGAGCTACGGGCCAGAGCTTCAGCCAGGG...GCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAGAATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CCA 90 bp GAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCGGCTGGTCGTGCCCTaGCTGAAGCTCTGGCCCGTA +
Preference number: 4 (lower is better)
Translates to: ERNVLWYACTCTVPGAPVRLVVP*LKLWPV
Trigger: TACGGGCCAGAGCTTCAGCCAGGGCACGACCAGCCG...CACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CCA 90 bp GCACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATCGTGGACCAGGCGCTTaGTGGGCGACAGGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: ALLVTLQLTLERCCPLSYRGPGA*WATGWR
Trigger: ACGCCACCCTGTCGCCCACCAAGCGCCTGGTCCACG...ATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CCA 90 bp TGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCATCTATGTGGTGTTCTaGGGACTGCAGGGCCCGCAA +
Preference number: 4 (lower is better)
Translates to: CLVVCMHMHCSRSACALLIYVVF*GLQGPQ
Trigger: TTGCGGGCCCTGCAGTCCCCAGAACACCACATAGAT...GAGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCCGCGGCGGCATTCTGTaGGCCGTGCTGGCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: NRKKCLVVCMHMHCSRSARGGIL*AVLAAC
Trigger: ACAGGCAGCCAGCACGGCCCACAGAATGCCGCCGCG...GGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GTGTGTAAACTATTCTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGGGCCGGCGGCATAGCTaGCCCTCTGGAAGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: VCKLFCVLCLTITLTPHRGRRHS*PSGRWP
Trigger: CGGCCACCTTCCAGAGGGCCAGCTATGCCGCCGGCC...CCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAGAATAGTTTACACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCCTCCCCAGCGCAGACTaGATCACGTACAGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: NVLWYACTCTVPGAPVPCLPSAD*ITYSKA
Trigger: TGCCTTGCTGTACGTGATCCAGTCTGCGCTGGGGAG...GCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCGCGCACAGGGGAGATaGAGGGCGTGCGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: KQKEMSCGMHAHALFPERRAQGR*RACGRR
Trigger: CCTCCTCCCGCACGCCCTCCATCTCCCCTGTGCGCG...GCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GTTCACTGTAGGGACGGGCAGCTGAGTAGAAGTCAACGTAGTTGCCGGTGGACTTTGCTGAGCGGTTGTTaGGAGACACGCGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: VHCRDGQLSRSQRSCRWTLLSGC*ETRAQG
Trigger: CCCCTGTGCGCGTGTCTCCCAACAACCGCTCAGCAA...AGTCCACCGGCAACTACGTTGACTTCTACTCAGCTGCCCGTCCCTACAGTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GGCATAGCTGGCCCTCTGGAAGGTGGCCGCGGCGGCATTCTGTGGGCCGTGCTGGAAAGAAATGTCTTGTaGTATGCATGCACATGCACT +
Preference number: 4 (lower is better)
Translates to: GIAGPLEGGRGGILWAVLERNVL*YACTCT
Trigger: AGTGCATGTGCATGCATACCACAAGACATTTCTTTC...CAGCACGGCCCACAGAATGCCGCCGCGGCCACCTTCCAGAGGGCCAGCTATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR CAA 72 bp GCCAAGGTGCCTTCAGGCGGGAGAGCAGGGCCGGATTaGCTGTATGGAGACTCAACAGAGGGACAATACTGC +
Preference number: 4 (lower is better)
Translates to: AKVPSGGRAGPD*LYGDSTEGQYC
Trigger: GCAGTATTGTCCCTCTGTTGAGTCTCCATACAGCAAATCCGGCCCTGCTCTCCCGCCTGAAGGCACCTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR TCA 90 bp TCACACCCAGGAGTCGGGGGAGGCCGGGTAGTGGCTCGTTTCATAGTTCAGTTCTGGTGCTGCAACATCTaGATCACTTCCGGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: SHPGVGGGRVVARFIVQFWCCNI*ITSGSS
Trigger: GGAACTGCCGGAAGTGATTCAGATGTTGCAGCACCA...GAACTGAACTATGAAACGAGCCACTACCCGGCCTCCCCCGACTCCTGGGTGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR TCA 90 bp ATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCGAATTTTCCCAGCCTaGGTGGGGGATAATCACCGC +
Preference number: 4 (lower is better)
Translates to: MSCGMHAHALFPERLCPARIFPA*VGDNHR
Trigger: GCGGTGATTATCCCCCACTCAGGCTGGGAAAATTCG...AGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp TGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCCAGCGTGTCTGGATTTaGGCACTCAGAGAGCAGTGT +
Preference number: 4 (lower is better)
Translates to: CLVVCMHMHCSRSACALLQRVWI*ALREQC
Trigger: ACACTGCTCTCTGAGTGCTCAAATCCAGACACGCTG...GAGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp CTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCCTCGTCTCTCCCAGCGTGTCTGGATTTaGGCACTCAGAGAGCAGTGT +
Preference number: 4 (lower is better)
Translates to: LVLNDNPYAPPARMPRLSQRVWI*ALREQC
Trigger: ACACTGCTCTCTGAGTGCTCAAATCCAGACACGCTG...GGAGAGACGAGGCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp CCCACCGGCCCGAATGCCTCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGGGCTCGGATATATACTaGCCACTTCCAGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: PTGPNASSLLPSTTFSIKGSDIY*PLPAPC
Trigger: GCAGGGAGCTGGAAGTGGTCAGTATATATCCGAGCC...CTTTATACTGAACGTGGTTGATGGGAGGAGAGACGAGGCATTCGGGCCGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
CDS-3UTR TCA 90 bp AATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCACTGCCACATGCTGTTaGGGACCTGAGATGCAGCCT +
Preference number: 4 (lower is better)
Translates to: NVLWYACTCTVPGAPVPCTATCC*GPEMQP
Trigger: AGGCTGCATCTCAGGTCCTCAACAGCATGTGGCAGT...GCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp CTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCCTCGTCTCTCCGTAGGGACGGGCAGCTaGGTAGAAGTCAACGTAGTT +
Preference number: 4 (lower is better)
Translates to: LVLNDNPYAPPARMPRLSVGTGS*VEVNVV
Trigger: AACTACGTTGACTTCTACTCAGCTGCCCGTCCCTAC...GGAGAGACGAGGCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp GGAGGCCGGGTAGTGGCTCGTTTCATAGTTCAGTTCACTGTAGGGACGGGCAGCGTAGGGACGGGCAGCTaGGTAGAAGTCAACGTAGTT +
Preference number: 4 (lower is better)
Translates to: GGRVVARFIVQFTVGTGSVGTGS*VEVNVV
Trigger: AACTACGTTGACTTCTACTCAGCTGCCCGTCCCTAC...GCTGCCCGTCCCTACAGTGAACTGAACTATGAAACGAGCCACTACCCGGCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CTATTCTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCTCTCGGATCCGAGCTTaGATCGCTCCAGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LFCVLCLTITLTPHRPECSRIRA*IAPAGW
Trigger: CCAGCCAGCTGGAGCGATGCAAGCTCGGATCCGAGA...GCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAGAATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCATGCTGCTCATGCTaGCAGTCTCGGATCCGAGCT +
Preference number: 4 (lower is better)
Translates to: NVLWYACTCTVPGAPVPCSCCSC*QSRIRA
Trigger: AGCTCGGATCCGAGACTGGCAGCATGAGCAGCATGA...GCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TCGATCTCACTGCTCCCCAGCGCAGACTGGATCACGTACAGCAAGGCATCCGTATCATGCTGCTCATGCTaGCAGTCTCGGATCCGAGCT +
Preference number: 4 (lower is better)
Translates to: SISLLPSADWITYSKASVSCCSC*QSRIRA
Trigger: AGCTCGGATCCGAGACTGGCAGCATGAGCAGCATGA...TACGGATGCCTTGCTGTACGTGATCCAGTCTGCGCTGGGGAGCAGTGAGATCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR GCA 90 bp TCGTTGGCCTTCCCATACACCAGGTTTCTCAGAGCTCCACAGGCACTACGGTGGCTGCTGAACTCATGCTaGTCATGCTGCCAGTCTCGG +
Preference number: 4 (lower is better)
Translates to: SLAFPYTRFLRAPQALRWLLNSC*SCCQSR
Trigger: CCGAGACTGGCAGCATGAGCAGCATGAGTTCAGCAG...CCACCGTAGTGCCTGTGGAGCTCTGAGAAACCTGGTGTATGGGAAGGCCAACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR GCA 90 bp GAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGGGGCCCAGGTGCCCATaGTGGCTGCTGTATGAGGCT +
Preference number: 4 (lower is better)
Translates to: ERNVLWYACTCTVPGAPVGPRCP*WLLYEA
Trigger: AGCCTCATACAGCAGCCAGCATGGGCACCTGGGCCC...CACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTAACTCTGGGCCCAGGTaGCCATGCTGGCTGCTGTAT +
Preference number: 4 (lower is better)
Translates to: EMSCGMHAHALFPERLCPNSGPR*PCWLLY
Trigger: ATACAGCAGCCAGCATGGGCACCTGGGCCCAGAGTT...AGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CGGATCTCCAGGTCAGTCGTCTTGCGGAGTAACCTCACCAGTGCTGGGATGCCAGAGCAGGGCCGGATTTaGTGTATGGAGACTCAACAG +
Preference number: 4 (lower is better)
Translates to: RISRSVVLRSNLTSAGMPEQGRI*CMETQQ
Trigger: CTGTTGAGTCTCCATACAGCAAATCCGGCCCTGCTC...TGGCATCCCAGCACTGGTGAGGTTACTCCGCAAGACGACTGACCTGGAGATCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR GCA 90 bp AACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCGGGACCTGGCCAAGGTaGCTTCAGGCGGGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: NRKKCLVVCMHMHCSRSAGTWPR*LQAGEQ
Trigger: CTGCTCTCCCGCCTGAAGGCACCTTGGCCAGGTCCC...GGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCCTCGTCCAGGTCAGTCGTCTTaGGGAGTAACCTCACCAGTG +
Preference number: 4 (lower is better)
Translates to: LCLVLNDNPYAPPARMPRPGQSS*GVTSPV
Trigger: CACTGGTGAGGTTACTCCGCAAGACGACTGACCTGG...ACGAGGCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TCGTTGGCCTTCCCATACACCAGGTTTCTCAGAGCTCCACAGGCACTACGGTGGCCAGGTCAGTCGTCTTaGGGAGTAACCTCACCAGTG +
Preference number: 4 (lower is better)
Translates to: SLAFPYTRFLRAPQALRWPGQSS*GVTSPV
Trigger: CACTGGTGAGGTTACTCCGCAAGACGACTGACCTGG...CCACCGTAGTGCCTGTGGAGCTCTGAGAAACCTGGTGTATGGGAAGGCCAACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR GCA 90 bp AGTCGGGGGAGGCCGGGTAGTGGCTCGTTTCATAGTTCAGTTCACTGTAGGGACTGCTATCGATCTCACTaGTCCCCAGCGCAGACTGGA +
Preference number: 4 (lower is better)
Translates to: SRGRPGSGSFHSSVHCRDCYRSH*SPAQTG
Trigger: TCCAGTCTGCGCTGGGGAGCAGTGAGATCGATAGCA...GTCCCTACAGTGAACTGAACTATGAAACGAGCCACTACCCGGCCTCCCCCGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AGGTGCATGGTGTACTCGCTGGCGGGAGGGCGATGGTGGACCTGGTCCTCGAAGAGTTTTCAACGGTCTTaGTATCGATCTCACTGCTCC +
Preference number: 4 (lower is better)
Translates to: RCMVYSLAGGRWWTWSSKSFQRS*YRSHCS
Trigger: GGAGCAGTGAGATCGATAGCAAGACCGTTGAAAACT...CTTCGAGGACCAGGTCCACCATCGCCCTCCCGCCAGCGAGTACACCATGCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CTATTCTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCTCCCTGAGACGTTTCTaGCGCCAGCCGGTACGAGAG +
Preference number: 4 (lower is better)
Translates to: LFCVLCLTITLTPHRPECSLRRF*RQPVRE
Trigger: CTCTCGTACCGGCTGGCGGCAGAAACGTCTCAGGGA...GCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAGAATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCGTCCAGCTCGTCCGTaGCCATGTGCTGTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: ERNVLWYACTCTVPGAPVRPARP*PCAVPE
Trigger: CTCAGGGACAGCACATGGGCACGGACGAGCTGGACG...CACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GCCGTCCCCCACACAGTGTGTAAACTATTCTGTGTCTTGTGCTTAACGATAACCGTTCTGCAGGGCGCCTaGCGCCCCTTCCAGCGTGTC +
Preference number: 4 (lower is better)
Translates to: AVPHTVCKLFCVLCLTITVLQGA*RPFQRV
Trigger: GACACGCTGGAAGGGGCGGCAGGCGCCCTGCAGAAC...GGTTATCGTTAAGCACAAGACACAGAATAGTTTACACACTGTGTGGGGGACGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CCTCCCATCAACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACAGCTCACGCCTGCAGCCAAGTTCTaGAGGGCGCCTGCCGCCCCT +
Preference number: 4 (lower is better)
Translates to: PPINHVQYKALLVTLQLTPAAKF*RAPAAP
Trigger: AGGGGCGGCAGGCGCCCTGCAGAACTTGGCTGCAGG...CGTGAGCTGTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTTGATGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCTAGAGTCCCTGCAGCCAAGTTCTaGAGGGCGCCTGCCGCCCCT +
Preference number: 4 (lower is better)
Translates to: QETSCCTEEPQCNLKPRVPAAKF*RAPAAP
Trigger: AGGGGCGGCAGGCGCCCTGCAGAACTTGGCTGCAGG...GACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GGCCTCAGCCACTTGCATCTAAAGAGCAAAGCTAGTTTACCCGCGGCCCATGTTCCACTTCCAGCTCCCTaGAGCCAAGTTCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GLSHLHLKSKASLPAAHVPLPAP*SQVLQG
Trigger: GCCCTGCAGAACTTGGCTGCAGGGAGCTGGAAGTGG...AACATGGGCCGCGGGTAAACTAGCTTTGCTCTTTAGATGCAAGTGGCTGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304623.13
CDS-3UTR GCA 90 bp CTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCCTCGTCTCTCCTCACTTCGTGCAGTGTaGAGCAGACAGCTGTCACTG +
Preference number: 4 (lower is better)
Translates to: LVLNDNPYAPPARMPRLSSLRAV*SRQLSL
Trigger: CAGTGACAGCTGTCTGCTGCACACTGCACGAAGTGA...GGAGAGACGAGGCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCGTGGTAGGTGGCGTTaGTGCCGGTGCACTCGTAGT +
Preference number: 4 (lower is better)
Translates to: KKCLVVCMHMHCSRSACARGRWR*CRCTRS
Trigger: ACTACGAGTGCACCGGCAGCAACGCCACCTACCACG...GGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GCACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTTCCCGGAGCGCCTGTaGCCTGCTCCTCACACCCAG +
Preference number: 4 (lower is better)
Translates to: ALLVTLQLTLERCCPLSYFPERL*PAPHTQ
Trigger: CTGGGTGTGAGGAGCAGGGCACAGGCGCTCCGGGAA...ATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTTCCCGGAGCGCCTGTaGCCTGCTCCTCACACCCAG +
Preference number: 4 (lower is better)
Translates to: NRKKCLVVCMHMHCSRSAFPERL*PAPHTQ
Trigger: CTGGGTGTGAGGAGCAGGGCACAGGCGCTCCGGGAA...GGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTGGTATGCATGCACATaGACTGTTCCCGGAGCGCCT +
Preference number: 4 (lower is better)
Translates to: NVLWYACTCTVPGAPVPCWYACT*TVPGAP
Trigger: AGGCGCTCCGGGAACAGTGCATGTGCATGCATACCA...GCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TGCAGGGCGCCTGCCGCCCCTTCCAGCGTGTCTGGATTTGAGCACTCAGAGAGCCTCACGCTAGAAAGGTaGTGCCCACTGTCATATTTA +
Preference number: 4 (lower is better)
Translates to: CRAPAAPSSVSGFEHSESLTLER*CPLSYL
Trigger: TAAATATGACAGTGGGCAGCACCTTTCTAGCGTGAG...GCTCTCTGAGTGCTCAAATCCAGACACGCTGGAAGGGGCGGCAGGCGCCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR GCA 90 bp AACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCCCCCACCGGCCCGAATaGCTCGTCTCTCCTCCCATC +
Preference number: 4 (lower is better)
Translates to: NRKKCLVVCMHMHCSRSAPHRPE*LVSPPI
Trigger: GATGGGAGGAGAGACGAGGCATTCGGGCCGGTGGGG...GGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTTGCATCGCTCCAGCTaGCTGGCTACGATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: RNVLWYACTCTVPGAPVPLHRSS*LATICR
Trigger: ACGGCAGATCGTAGCCAGCCAGCTGGAGCGATGCAA...GGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CCTCCCATCAACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACAGCTCACGGCGGCGCGGGCAGCGTaGAGCTGGAGTAGTAGAGCG +
Preference number: 4 (lower is better)
Translates to: PPINHVQYKALLVTLQLTAARAA*SWSSRA
Trigger: CGCTCTACTACTCCAGCTCCACGCTGCCCGCGCCGC...CGTGAGCTGTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTTGATGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CCA 90 bp AACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGCGCGCTGCAGCTTGGTaGGCGAACCGCCCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: NHVQYKALLVTLQLTLERRAAAW*ANRPGA
Trigger: CGCCCCAGGGCGGTTCGCCCACCAAGCTGCAGCGCG...CCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CCA 90 bp AACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGCGCCGCGCTGCAGCTTaGTGGGCGAACCGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: NHVQYKALLVTLQLTLERRRAAA*WANRPG
Trigger: CCCAGGGCGGTTCGCCCACCAAGCTGCAGCGCGGCG...CCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CCA 90 bp AAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCTGGTGCTGTAGGACTTaGCCAGGCGGCTGGGCGACT +
Preference number: 4 (lower is better)
Translates to: KEMSCGMHAHALFPERLCWCCRT*PGGWAT
Trigger: AGTCGCCCAGCCGCCTGGCCAAGTCCTACAGCACCA...GCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CCA 90 bp CAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCTAGAGTCTGGTGGACTGCACGGTaGGGGGCGAGGTCACGCGGA +
Preference number: 4 (lower is better)
Translates to: QETSCCTEEPQCNLKPRVWWTAR*GARSRG
Trigger: TCCGCGTGACCTCGCCCCCCACCGTGCAGTCCACCA...GACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CCA 90 bp CTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGAAGCCGTCAGGGCCCGCAACTCTaGGCCCAGGTGCCCATGCTG +
Preference number: 4 (lower is better)
Translates to: LKPRVTTDEESKQSVRSRQGPQL*AQVPML
Trigger: CAGCATGGGCACCTGGGCCCAGAGTTGCGGGCCCTG...ACGGCTTCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AGTCGGGGGAGGCCGGGTAGTGGCTCGTTTCATAGTTCAGTTCACTGTAGGGACATCTATGTGGTGTTCTaGGGACTGCAGGGCCCGCAA +
Preference number: 4 (lower is better)
Translates to: SRGRPGSGSFHSSVHCRDIYVVF*GLQGPQ
Trigger: TTGCGGGCCCTGCAGTCCCCAGAACACCACATAGAT...GTCCCTACAGTGAACTGAACTATGAAACGAGCCACTACCCGGCCTCCCCCGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GGCCTCAGCCACTTGCATCTAAAGAGCAAAGCTAGTTTACCCGCGGCCCATGTTGACACCAGGGGAAGATaGGGCTGTGCTCGTGCGGTA +
Preference number: 4 (lower is better)
Translates to: GLSHLHLKSKASLPAAHVDTRGR*GCARAV
Trigger: TACCGCACGAGCACAGCCCCATCTTCCCCTGGTGTC...AACATGGGCCGCGGGTAAACTAGCTTTGCTCTTTAGATGCAAGTGGCTGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304623.13
CDS-3UTR CCA 90 bp CTATTCTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCGACACCAGGGGAAGATaGGGCTGTGCTCGTGCGGTA +
Preference number: 4 (lower is better)
Translates to: LFCVLCLTITLTPHRPECDTRGR*GCARAV
Trigger: TACCGCACGAGCACAGCCCCATCTTCCCCTGGTGTC...GCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAGAATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGGCCCTCTGGAAGGTaGCCGCGGCGGCATTCTGTG +
Preference number: 4 (lower is better)
Translates to: NRKKCLVVCMHMHCSRSAWPSGR*PRRHSV
Trigger: CACAGAATGCCGCCGCGGCCACCTTCCAGAGGGCCA...GGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCTTTTCCCAGCCTGAGTaGGGGATAATCACCGCGTTG +
Preference number: 4 (lower is better)
Translates to: CLVVCMHMHCSRSACALLFSQPE*GIITAL
Trigger: CAACGCGGTGATTATCCCCCACTCAGGCTGGGAAAA...GAGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCTCCTTAGGCACCCGGTaGCGTTACGCAGCACCTGTG +
Preference number: 4 (lower is better)
Translates to: KKCLVVCMHMHCSRSACASLGTR*RYAAPV
Trigger: CACAGGTGCTGCGTAACGCCACCGGGTGCCTAAGGA...GGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCAGCATCCTTGCCATTaGCCTCGCCACAGAGTAGCC +
Preference number: 4 (lower is better)
Translates to: KCLVVCMHMHCSRSACALQHPCH*PRHRVA
Trigger: GGCTACTCTGTGGCGAGGCCAATGGCAAGGATGCTG...CAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AGGGCGCCTGCCGCCCCTTCCAGCGTGTCTGGATTTGAGCACTCAGAGAGCAGTGACGAGGCTACAAAGTaGTATTGTGACCATCCATCC +
Preference number: 4 (lower is better)
Translates to: RAPAAPSSVSGFEHSESSDEATK*YCDHPS
Trigger: GGATGGATGGTCACAATACCACTTTGTAGCCTCGTC...ACTGCTCTCTGAGTGCTCAAATCCAGACACGCTGGAAGGGGCGGCAGGCGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR CCA 90 bp ATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTGCCGGTCCCTCTCGATaGTTGAAGACGAGGCTACAA +
Preference number: 4 (lower is better)
Translates to: MSCGMHAHALFPERLCPAAGPSR*LKTRLQ
Trigger: TTGTAGCCTCGTCTTCAACCATCGAGAGGGACCGGC...AGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CCCACCGGCCCGAATGCCTCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGGCCGGTCCCTCTCGATaGTTGAAGACGAGGCTACAA +
Preference number: 4 (lower is better)
Translates to: PTGPNASSLLPSTTFSIKAGPSR*LKTRLQ
Trigger: TTGTAGCCTCGTCTTCAACCATCGAGAGGGACCGGC...CTTTATACTGAACGTGGTTGATGGGAGGAGAGACGAGGCATTCGGGCCGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AGGCCGGGTAGTGGCTCGTTTCATAGTTCAGTTCACTGTAGGGACGGGCAGCTGGCCGGTCCCTCTCGATaGTTGAAGACGAGGCTACAA +
Preference number: 4 (lower is better)
Translates to: RPGSGSFHSSVHCRDGQLAGPSR*LKTRLQ
Trigger: TTGTAGCCTCGTCTTCAACCATCGAGAGGGACCGGC...CAGCTGCCCGTCCCTACAGTGAACTGAACTATGAAACGAGCCACTACCCGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCCGCGCACAGGGGAGATaGAGGGCGTGCGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: QNRKKCLVVCMHMHCSRSRAQGR*RACGRR
Trigger: CCTCCTCCCGCACGCCCTCCATCTCCCCTGTGCGCG...GCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCCGTAATCTTTTCTGCTaGGCTCCTGTGGGACTGGCT +
Preference number: 4 (lower is better)
Translates to: CLVVCMHMHCSRSACALLRNLFC*APVGLA
Trigger: AGCCAGTCCCACAGGAGCCCAGCAGAAAAGATTACG...GAGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGGCGGGAGGGCGATGGTaGACCTGGTCCTCGAAGAAG +
Preference number: 4 (lower is better)
Translates to: ERNVLWYACTCTVPGAPVAGGRW*TWSSKK
Trigger: CTTCTTCGAGGACCAGGTCCACCATCGCCCTCCCGC...CACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGGCATGGTGTACTCGCTaGCGGGAGGGCGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: ERNVLWYACTCTVPGAPVAWCTR*REGDGG
Trigger: TCCACCATCGCCCTCCCGCCAGCGAGTACACCATGC...CACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCGCATGGTGTACTCGCTaGCGGGAGGGCGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: KEMSCGMHAHALFPERLCAWCTR*REGDGG
Trigger: TCCACCATCGCCCTCCCGCCAGCGAGTACACCATGC...GCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp AACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTCCGCTTTTGTTGTCTaGGCGCGGCCGCGGGACAAG +
Preference number: 4 (lower is better)
Translates to: NRKKCLVVCMHMHCSRSASAFVV*ARPRDK
Trigger: CTTGTCCCGCGGCCGCGCTCAGACAACAAAAGCGGA...GGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000504499.5
CDS-3UTR TCA 90 bp GTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCCTCACACCCTTTTTGACCATCTTGTaGCTGCCACTGAAACTGCTC +
Preference number: 4 (lower is better)
Translates to: VCMHMHCSRSACALLLTPFLTIL*LPLKLL
Trigger: GAGCAGTTTCAGTGGCAGTCACAAGATGGTCAAAAA...GGGTGTGAGGAGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR TCA 90 bp GGACTTGAGACCCAGGTGCATGGTGTACTCGCTGGCGGGAGGGCGATGGTGGACTCTTCGATATCTTTTTaGCCATCTTGTGACTGCCAC +
Preference number: 4 (lower is better)
Translates to: GLETQVHGVLAGGRAMVDSSISF*PSCDCH
Trigger: GTGGCAGTCACAAGATGGTCAAAAAGATATCGAAGA...GTCCACCATCGCCCTCCCGCCAGCGAGTACACCATGCACCTGGGTCTCAAGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR TCA 90 bp TCGTTGGCCTTCCCATACACCAGGTTTCTCAGAGCTCCACAGGCACTACGGTGGGGTTTGGAATTGAGCTaGAGTGCACTCTGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: SLAFPYTRFLRAPQALRWGLELS*SALWES
Trigger: GCTCTCCCAGAGTGCACTTCAGCTCAATTCCAAACC...CCACCGTAGTGCCTGTGGAGCTCTGAGAAACCTGGTGTATGGGAAGGCCAACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR TCA 90 bp AGTGTGCAGCAGACAGCTGTCACTGTGTCATCCGACATGGCCTTGCTTGCAGTGACTTCGGTCATCCGATaGTCCAACAGGTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: SVQQTAVTVSSDMALLAVTSVIR*SNRSTR
Trigger: CCTGGTGGACCTGTTGGATCATCGGATGACCGAAGT...CACTGCAAGCAAGGCCATGTCGGATGACACAGTGACAGCTGTCTGCTGCACACT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR TCA 90 bp AAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCTCCAAAGGACTCCTGTaGCCAGCTCCCGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: KKCLVVCMHMHCSRSACASKGLL*PAPGSP
Trigger: TGGAGATCCGGGAGCTGGTCACAGGAGTCCTTTGGA...GGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp AACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCCCCATGTGCTGTCCCTaGGACGTTTCTGCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: NRKKCLVVCMHMHCSRSAPMCCP*DVSAAS
Trigger: GCTGGCGGCAGAAACGTCTCAGGGACAGCACATGGG...GGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp AGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCGGCTCGGATATATACTaGCCACTTCCAGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: RNVLWYACTCTVPGAPVPGSDIY*PLPAPC
Trigger: GCAGGGAGCTGGAAGTGGTCAGTATATATCCGAGCC...GGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
CDS-3UTR TCA 90 bp GATCCAACAGGTCCACCAGGAGCTGGATGCCTCCTTGTCTCCTTATCTCGGCTTGGCTCGGATATATACTaGCCACTTCCAGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: DPTGPPGAGCLLVSLSRLGSDIY*PLPAPC
Trigger: GCAGGGAGCTGGAAGTGGTCAGTATATATCCGAGCC...AAGCCGAGATAAGGAGACAAGGAGGCATCCAGCTCCTGGTGGACCTGTTGGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR TCA 90 bp AAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGACTGCCACATGCTGTTaGGGACCTGAGATGCAGCCT +
Preference number: 4 (lower is better)
Translates to: KCLVVCMHMHCSRSACALTATCC*GPEMQP
Trigger: AGGCTGCATCTCAGGTCCTCAACAGCATGTGGCAGT...CAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp CTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCCTCGTGTCCCTCTCGATGGTTaGAGACGAGGCTACAAAGTG +
Preference number: 4 (lower is better)
Translates to: LCLVLNDNPYAPPARMPRVPLDG*RRGYKV
Trigger: CACTTTGTAGCCTCGTCTTCAACCATCGAGAGGGAC...ACGAGGCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp CTATTCTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCAGTTGCCGGTGGACTTaGGACCCAGGTGCATGGTGT +
Preference number: 4 (lower is better)
Translates to: LFCVLCLTITLTPHRPECSCRWT*DPGAWC
Trigger: ACACCATGCACCTGGGTCTCAAGTCCACCGGCAACT...GCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAGAATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp ATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTGTAGGGACGGGCAGCTaGGTAGAAGTCAACGTAGTT +
Preference number: 4 (lower is better)
Translates to: MSCGMHAHALFPERLCPAVGTGS*VEVNVV
Trigger: AACTACGTTGACTTCTACTCAGCTGCCCGTCCCTAC...AGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AGTTTTCAACGGTCTTGCTATCGATCTCACTGCTCCCCAGCGCAGACTGGATCATCTCGGATCCGAGCTTaGATCGCTCCAGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SFQRSCYRSHCSPAQTGSSRIRA*IAPAGW
Trigger: CCAGCCAGCTGGAGCGATGCAAGCTCGGATCCGAGA...TGATCCAGTCTGCGCTGGGGAGCAGTGAGATCGATAGCAAGACCGTTGAAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR GCA 90 bp GAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGTGGCATACAGCTCCTaGGAGTGCTTGCTGTACTGC +
Preference number: 4 (lower is better)
Translates to: EMSCGMHAHALFPERLCPVAYSS*ECLLYC
Trigger: GCAGTACAGCAAGCACTCGCAGGAGCTGTATGCCAC...AGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR GCA 90 bp TGCAACCTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGAAACCAGCTGCCAGGCTaGCCGGCCTCTGGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: CNLKPRVTTDEESKQSVRNQLPG*PASGGW
Trigger: CCACCCTCCAGAGGCCGGGCAGCCTGGCAGCTGGTT...TCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAGGTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR GCA 90 bp AAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCGGTGCCCATGCTGGCTaGTGTATGAGGCTCGGGAAC +
Preference number: 4 (lower is better)
Translates to: KEMSCGMHAHALFPERLCGAHAG*CMRLGN
Trigger: GTTCCCGAGCCTCATACAGCAGCCAGCATGGGCACC...GCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TGTCATGGCATCTTTCCTGGAAGTGTGTTCGCCTTTAGCTCCGTGGTAGGTGGCAACTCTGGGCCCAGGTaGCCATGCTGGCTGCTGTAT +
Preference number: 4 (lower is better)
Translates to: CHGIFPGSVFAFSSVVGGNSGPR*PCWLLY
Trigger: ATACAGCAGCCAGCATGGGCACCTGGGCCCAGAGTT...GCCACCTACCACGGAGCTAAAGGCGAACACACTTCCAGGAAAGATGCCATGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR GCA 90 bp TCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACGTAGGTGCCGGTGTGTaGTGGCGGCAGAGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: SSLLPSTTFSIKHFSLLYVGAGV*WRQRVP
Trigger: GGGGACCCTCTGCCGCCAGCACACACCGGCACCTAC...GTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTTGATGGGAGGAGAGACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGTGGGCCGTGCTGGCTaGCTGTGCGCTGCAAGGGGA +
Preference number: 4 (lower is better)
Translates to: QNRKKCLVVCMHMHCSRSVGRAG*LCAARG
Trigger: TCCCCTTGCAGCGCACAGGCAGCCAGCACGGCCCAC...GCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCGTGTTGCAAGTAGGCTaGCGCGTTAGACTGGACCGA +
Preference number: 4 (lower is better)
Translates to: RNVLWYACTCTVPGAPVPVLQVG*RVRLDR
Trigger: TCGGTCCAGTCTAACGCGGCAGCCTACTTGCAACAC...GGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGTTCTGCAGGGCGCCTaGCGCCCCTTCCAGCGTGTC +
Preference number: 4 (lower is better)
Translates to: QNRKKCLVVCMHMHCSRSVLQGA*RPFQRV
Trigger: GACACGCTGGAAGGGGCGGCAGGCGCCCTGCAGAAC...GCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCACTTCCAGCTCCCTaGAGCCAAGTTCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: ERNVLWYACTCTVPGAPVPLPAP*SQVLQG
Trigger: GCCCTGCAGAACTTGGCTGCAGGGAGCTGGAAGTGG...CACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
CDS-3UTR GCA 90 bp CTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCCTCGTTCACTTCGTGCAGTGTaGAGCAGACAGCTGTCACTG +
Preference number: 4 (lower is better)
Translates to: LCLVLNDNPYAPPARMPRSLRAV*SRQLSL
Trigger: CAGTGACAGCTGTCTGCTGCACACTGCACGAAGTGA...ACGAGGCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCACTTCGTGCAGTGTaGAGCAGACAGCTGTCACTG +
Preference number: 4 (lower is better)
Translates to: NVLWYACTCTVPGAPVPCSLRAV*SRQLSL
Trigger: CAGTGACAGCTGTCTGCTGCACACTGCACGAAGTGA...GCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp ATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCTCAGATCTCGGTACTaGCACATGCTGTTGAGGACC +
Preference number: 4 (lower is better)
Translates to: MSCGMHAHALFPERLCPALRSRY*HMLLRT
Trigger: GGTCCTCAACAGCATGTGGCAGTACCGAGATCTGAG...AGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AGTCGGGGGAGGCCGGGTAGTGGCTCGTTTCATAGTTCAGTTCACTGTAGGGACCTCAGATCTCGGTACTaGCACATGCTGTTGAGGACC +
Preference number: 4 (lower is better)
Translates to: SRGRPGSGSFHSSVHCRDLRSRY*HMLLRT
Trigger: GGTCCTCAACAGCATGTGGCAGTACCGAGATCTGAG...GTCCCTACAGTGAACTGAACTATGAAACGAGCCACTACCCGGCCTCCCCCGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGAAGCCGTCCCCCACACAGTGGTAGGTGGCGTTGCTaGCGGTGCACTCGTAGTCTG +
Preference number: 4 (lower is better)
Translates to: VTTDEESKQSVRSRPPHSGRWRC*RCTRSL
Trigger: CAGACTACGAGTGCACCGGCAGCAACGCCACCTACC...ACTGTGTGGGGGACGGCTTCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCGACTTGAGACCCAGGTaGATGGTGTACTCGCTGGCG +
Preference number: 4 (lower is better)
Translates to: KKCLVVCMHMHCSRSACADLRPR*MVYSLA
Trigger: CGCCAGCGAGTACACCATGCACCTGGGTCTCAAGTC...GGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGGTATGCATGCACATaGACTGTTCCCGGAGCGCCT +
Preference number: 4 (lower is better)
Translates to: RNVLWYACTCTVPGAPVPWYACT*TVPGAP
Trigger: AGGCGCTCCGGGAACAGTGCATGTGCATGCATACCA...GGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCGTCTTGTGGTATGCATaGACATGCACTGTTCCCGGA +
Preference number: 4 (lower is better)
Translates to: CLVVCMHMHCSRSACALLVLWYA*TCTVPG
Trigger: TCCGGGAACAGTGCATGTGCATGCATACCACAAGAC...GAGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCCTCGTCTCTCCACAGAGGAACCCCAATaGAACCTGAAGCCTAGAGTC +
Preference number: 4 (lower is better)
Translates to: LVLNDNPYAPPARMPRLSTEEPQ*NLKPRV
Trigger: GACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGT...GGAGAGACGAGGCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TCACACCCAGGAGTCGGGGGAGGCCGGGTAGTGGCTCGTTTCATAGTTCAGTTCTTCCCTTGTAGGGTCTaGACATGGAGGCAGAATGTG +
Preference number: 4 (lower is better)
Translates to: SHPGVGGGRVVARFIVQFFPCRV*TWRQNV
Trigger: CACATTCTGCCTCCATGTGCAGACCCTACAAGGGAA...GAACTGAACTATGAAACGAGCCACTACCCGGCCTCCCCCGACTCCTGGGTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513588.5
CDS-3UTR CCA 90 bp GGCCTCAGCCACTTGCATCTAAAGAGCAAAGCTAGTTTACCCGCGGCCCATGTTTTGCATCGCTCCAGCTaGCTGGCTACGATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: GLSHLHLKSKASLPAAHVLHRSS*LATICR
Trigger: ACGGCAGATCGTAGCCAGCCAGCTGGAGCGATGCAA...AACATGGGCCGCGGGTAAACTAGCTTTGCTCTTTAGATGCAAGTGGCTGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304623.13
CDS-3UTR CCA 90 bp AATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCGGTTGCTATGGTAGCTaGCCGGATACTGGAAAGACC +
Preference number: 4 (lower is better)
Translates to: NVLWYACTCTVPGAPVPCGCYGS*PDTGKT
Trigger: GGTCTTTCCAGTATCCGGCCAGCTACCATAGCAACC...GCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
CDS-3UTR CCA 90 bp TACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTTAGGATCACTCAGGGCCCGCAACTCTaGGCCCAGGTGCCCATGCTG +
Preference number: 4 (lower is better)
Translates to: YSTAHARKVLPTVIFRITQGPQL*AQVPML
Trigger: CAGCATGGGCACCTGGGCCCAGAGTTGCGGGCCCTG...AGTGATCCTAAATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGATCTATGTGGTGTTCTaGGGACTGCAGGGCCCGCAA +
Preference number: 4 (lower is better)
Translates to: KCLVVCMHMHCSRSACALIYVVF*GLQGPQ
Trigger: TTGCGGGCCCTGCAGTCCCCAGAACACCACATAGAT...CAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CGCTGGCGGGAGGGCGATGGTGGACCTGGTCCTCGAAGAAGGACTCATCGTAATCGCGGTCTTCATAGATaGGATCTATGTGGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: RWREGDGGPGPRRRTHRNRGLHR*DLCGVL
Trigger: CAGAACACCACATAGATCCCATCTATGAAGACCGCG...ATTACGATGAGTCCTTCTTCGAGGACCAGGTCCACCATCGCCCTCCCGCCAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCGGGTCCCCCTGGCTCTaGCTGAGACTCCTCATAGGG +
Preference number: 4 (lower is better)
Translates to: NRKKCLVVCMHMHCSRSAGSPWL*LRLLIG
Trigger: CCCTATGAGGAGTCTCAGCCAGAGCCAGGGGGACCC...GGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCCGCGGCGGCATTCTGTaGGCCGTGCTGGCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: QNRKKCLVVCMHMHCSRSRGGIL*AVLAAC
Trigger: ACAGGCAGCCAGCACGGCCCACAGAATGCCGCCGCG...GCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CCTCCCATCAACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACAGCTCACGAGGGGTCCGCGTAATTaGAGGCTGGGCCGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: PPINHVQYKALLVTLQLTRGPRN*RLGRRH
Trigger: ATGCCGCCGGCCCAGCCTCCAATTACGCGGACCCCT...CGTGAGCTGTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTTGATGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCTGAATGCTATCAATaGACGGGGACCTGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: NVLWYACTCTVPGAPVPCSECYQ*TGTWPR
Trigger: CCTTGGCCAGGTCCCCGTCCATTGATAGCATTCAGA...GCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCGCTGCCGCGTTAGACTaGACCGAGGGAAACTGGTGC +
Preference number: 4 (lower is better)
Translates to: KEMSCGMHAHALFPERLCAAALD*TEGNWC
Trigger: GCACCAGTTTCCCTCGGTCCAGTCTAACGCGGCAGC...GCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGAGGTCCACCAGGAGCTaGATGCCTCCTTGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: KCLVVCMHMHCSRSACALRSTRS*MPPCLL
Trigger: AAGGAGACAAGGAGGCATCCAGCTCCTGGTGGACCT...CAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AGTTTTCAACGGTCTTGCTATCGATCTCACTGCTCCCCAGCGCAGACTGGATCATCCTTAGGCACCCGGTaGCGTTACGCAGCACCTGTG +
Preference number: 4 (lower is better)
Translates to: SFQRSCYRSHCSPAQTGSSLGTR*RYAAPV
Trigger: CACAGGTGCTGCGTAACGCCACCGGGTGCCTAAGGA...TGATCCAGTCTGCGCTGGGGAGCAGTGAGATCGATAGCAAGACCGTTGAAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR CCA 90 bp TGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCCTGGATCCCTTTTGGTaGTTCAGCACAGTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: CLVVCMHMHCSRSACALLLDPFW*FSTVWK
Trigger: CTTCCAGACTGTGCTGAACCACCAAAAGGGATCCAG...GAGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TCACACCCAGGAGTCGGGGGAGGCCGGGTAGTGGCTCGTTTCATAGTTCAGTTCCATCTGGATCCCTTTTaGTGGTTCAGCACAGTCTGG +
Preference number: 4 (lower is better)
Translates to: SHPGVGGGRVVARFIVQFHLDPF*WFSTVW
Trigger: CCAGACTGTGCTGAACCACCAAAAGGGATCCAGATG...GAACTGAACTATGAAACGAGCCACTACCCGGCCTCCCCCGACTCCTGGGTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CCCCAATGCAACCTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCCTGGCGGGAGGGCGATaGTGGACCTGGTCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: PQCNLKPRVTTDEESKQSLAGGR*WTWSSK
Trigger: CTTCGAGGACCAGGTCCACCATCGCCCTCCCGCCAG...GCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAGGTTGCATTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GCCGTCCCCCACACAGTGTGTAAACTATTCTGTGTCTTGTGCTTAACGATAACCCTGGCGGGAGGGCGATaGTGGACCTGGTCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: AVPHTVCKLFCVLCLTITLAGGR*WTWSSK
Trigger: CTTCGAGGACCAGGTCCACCATCGCCCTCCCGCCAG...GGTTATCGTTAAGCACAAGACACAGAATAGTTTACACACTGTGTGGGGGACGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCGCATGGTGTACTCGCTaGCGGGAGGGCGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: NRKKCLVVCMHMHCSRSAAWCTR*REGDGG
Trigger: TCCACCATCGCCCTCCCGCCAGCGAGTACACCATGC...GGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
3UTR CAA 72 bp GCCGTCCCCCACACAGTGTGTAAACTATTCTGTGTCTaGTGCTTAACGATAACCCTTACGCCCCACCGGCCC +
Preference number: 4 (lower is better)
Translates to: AVPHTVCKLFCV*CLTITLTPHRP
Trigger: GGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAGAATAGTTTACACACTGTGTGGGGGACGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
3UTR CAA 72 bp TCATCCGACATGGCCTTGCTTGCAGTGTTGTTGCTGTaGTTCCCTCCTGGAAGCCTGTGGACTAGGTCTCGC +
Preference number: 4 (lower is better)
Translates to: SSDMALLAVLLL*FPPGSLWTRSR
Trigger: GCGAGACCTAGTCCACAGGCTTCCAGGAGGGAACAACAGCAACAACACTGCAAGCAAGGCCATGTCGGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR TCA 90 bp AAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGTTCCTGTTCTTTGACTaGGGCGAGGATGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: KCLVVCMHMHCSRSACALFLFFD*GEDGRG
Trigger: ACCTCTGCCATCCTCGCCTCAGTCAAAGAACAGGAA...CAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000513588.5
CDS-3UTR TCA 90 bp AAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCAGGACACGACGATGTTaGTGGGCGAGCTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: KEMSCGMHAHALFPERLCRTRRC*WASWCC
Trigger: ACAGCACCAGCTCGCCCATCAACATCGTCGTGTCCT...GCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR TCA 90 bp AGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGGTGCTGCAACATCTaGATCACTTCCGGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: RNVLWYACTCTVPGAPVPWCCNI*ITSGSS
Trigger: GGAACTGCCGGAAGTGATTCAGATGTTGCAGCACCA...GGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp GTTCACTGTAGGGACGGGCAGCTGAGTAGAAGTCAACGTAGTTGCCGGTGGACTTGGTGCTGCAACATCTaGATCACTTCCGGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: VHCRDGQLSRSQRSCRWTWCCNI*ITSGSS
Trigger: GGAACTGCCGGAAGTGATTCAGATGTTGCAGCACCA...AGTCCACCGGCAACTACGTTGACTTCTACTCAGCTGCCCGTCCCTACAGTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR TCA 90 bp AAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCACTTCGGTCATCCGATaGTCCAACAGGTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: KKCLVVCMHMHCSRSACATSVIR*SNRSTR
Trigger: CCTGGTGGACCTGTTGGATCATCGGATGACCGAAGT...GGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp GCCGTCCCCCACACAGTGTGTAAACTATTCTGTGTCTTGTGCTTAACGATAACCCCCATGTGCTGTCCCTaGGACGTTTCTGCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: AVPHTVCKLFCVLCLTITPMCCP*DVSAAS
Trigger: GCTGGCGGCAGAAACGTCTCAGGGACAGCACATGGG...GGTTATCGTTAAGCACAAGACACAGAATAGTTTACACACTGTGTGGGGGACGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp CTCCTCACACCCAGGAGTCGGGGGAGGCCGGGTAGTGGCTCGTTTCATAGTTCACCTACTCCATCCCACTaGTCTTGGGATTTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: LLTPRSRGRPGSGSFHSSPTPSH*SWDFFF
Trigger: GAAAAAGAAATCCCAAGATCAGTGGGATGGAGTAGG...TGAACTATGAAACGAGCCACTACCCGGCCTCCCCCGACTCCTGGGTGTGAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR TCA 90 bp GAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTCAGCGTGTCTGGATTTaGGCACTCAGAGAGCAGTGT +
Preference number: 4 (lower is better)
Translates to: EMSCGMHAHALFPERLCPQRVWI*ALREQC
Trigger: ACACTGCTCTCTGAGTGCTCAAATCCAGACACGCTG...AGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp TCGTTGGCCTTCCCATACACCAGGTTTCTCAGAGCTCCACAGGCACTACGGTGGTGGGACTGGCTGTGCTaGAACCTGGTTGTGTTTGAT +
Preference number: 4 (lower is better)
Translates to: SLAFPYTRFLRAPQALRWWDWLC*NLVVFD
Trigger: ATCAAACACAACCAGGTTTCAGCACAGCCAGTCCCA...CCACCGTAGTGCCTGTGGAGCTCTGAGAAACCTGGTGTATGGGAAGGCCAACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR TCA 90 bp AGTGTGCAGCAGACAGCTGTCACTGTGTCATCCGACATGGCCTTGCTTGCAGTGGTAGGGACGGGCAGCTaGGTAGAAGTCAACGTAGTT +
Preference number: 4 (lower is better)
Translates to: SVQQTAVTVSSDMALLAVVGTGS*VEVNVV
Trigger: AACTACGTTGACTTCTACTCAGCTGCCCGTCCCTAC...CACTGCAAGCAAGGCCATGTCGGATGACACAGTGACAGCTGTCTGCTGCACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR TCA 90 bp TGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCAAACCGAGAAGGGAGTaGAGAACAGCCTCGAAAAAG +
Preference number: 4 (lower is better)
Translates to: CLVVCMHMHCSRSACALLKPRRE*RTASKK
Trigger: CTTTTTCGAGGCTGTTCTTCACTCCCTTCTCGGTTT...GAGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511377.5
CDS-3UTR GCA 90 bp AAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCGCTTCCTCGCAAACATaGACCCTCCGCCGGCGACAG +
Preference number: 4 (lower is better)
Translates to: KQKEMSCGMHAHALFPERASSQT*TLRRRQ
Trigger: CTGTCGCCGGCGGAGGGTGCATGTTTGCGAGGAAGC...GCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTGAACTCATGCTaGTCATGCTGCCAGTCTCGG +
Preference number: 4 (lower is better)
Translates to: KKCLVVCMHMHCSRSACALLNSC*SCCQSR
Trigger: CCGAGACTGGCAGCATGAGCAGCATGAGTTCAGCAG...GGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CCCCAATGCAACCTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCGGGCCCAGGTGCCCATaGTGGCTGCTGTATGAGGCT +
Preference number: 4 (lower is better)
Translates to: PQCNLKPRVTTDEESKQSGPRCP*WLLYEA
Trigger: AGCCTCATACAGCAGCCAGCATGGGCACCTGGGCCC...GCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAGGTTGCATTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp ACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTTGGGAAGATGGGGCTGTaGTCGTGCGGTAGGTGCCGG +
Preference number: 4 (lower is better)
Translates to: TSRYSTAHARKVLPTVIFGKMGL*SCGRCR
Trigger: CCGGCACCTACCGCACGAGCACAGCCCCATCTTCCC...AAATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCTGGCTGCCTGTGCGCTaGAAGGGGACGGAGTCGACA +
Preference number: 4 (lower is better)
Translates to: KQKEMSCGMHAHALFPERWLPVR*KGTEST
Trigger: TGTCGACTCCGTCCCCTTGCAGCGCACAGGCAGCCA...GCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCTGGGATCTTTCTGAATaGTATCAATGGACGGGGACC +
Preference number: 4 (lower is better)
Translates to: CLVVCMHMHCSRSACALLWDLSE*YQWTGT
Trigger: GGTCCCCGTCCATTGATAGCATTCAGAAAGATCCCA...GAGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCGTGTTGCAAGTAGGCTaGCGCGTTAGACTGGACCGA +
Preference number: 4 (lower is better)
Translates to: KKCLVVCMHMHCSRSACAVLQVG*RVRLDR
Trigger: TCGGTCCAGTCTAACGCGGCAGCCTACTTGCAACAC...GGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGTCACCAGTGCTGGGATaGCACCACAGTTTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: KCLVVCMHMHCSRSACALSPVLG*HHSFSG
Trigger: CCCTGAAAAACTGTGGTGGCATCCCAGCACTGGTGA...CAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCGTCCAGCTCGTCCGTaGCCATGTGCTGTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: KQKEMSCGMHAHALFPERRPARP*PCAVPE
Trigger: CTCAGGGACAGCACATGGGCACGGACGAGCTGGACG...GCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCTTGACTATTGATGGGTaGCACAGCATCTGGATCCCT +
Preference number: 4 (lower is better)
Translates to: CLVVCMHMHCSRSACALLLTIDG*HSIWIP
Trigger: AGGGATCCAGATGCTGTGGCACCCATCAATAGTCAA...GAGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCCGACATGGCCTTGCTTaGAGTGTTGTTGCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: CLVVCMHMHCSRSACALLRHGLA*SVVAVV
Trigger: AACAACAGCAACAACACTGCAAGCAAGGCCATGTCG...GAGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp ATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCATCCGACATGGCCTTaGTTGCAGTGTTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: MSCGMHAHALFPERLCPAHPTWP*LQCCCC
Trigger: ACAGCAACAACACTGCAAGCAAGGCCATGTCGGATG...AGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTCACTTCGTGCAGTGTaGAGCAGACAGCTGTCACTG +
Preference number: 4 (lower is better)
Translates to: RNVLWYACTCTVPGAPVPSLRAV*SRQLSL
Trigger: CAGTGACAGCTGTCTGCTGCACACTGCACGAAGTGA...GGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCGACCAACTTCTCGATaGCACCGGCATCCCGTAAGG +
Preference number: 4 (lower is better)
Translates to: ERNVLWYACTCTVPGAPVRPTSR*HRHPVR
Trigger: CCTTACGGGATGCCGGTGGCATCGAGAAGTTGGTCG...CACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp ATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTGTTGAGGACCTGAGATaGAGCCTTGACCACTTTTGG +
Preference number: 4 (lower is better)
Translates to: MSCGMHAHALFPERLCPAVEDLR*SLDHFW
Trigger: CCAAAAGTGGTCAAGGCTGCATCTCAGGTCCTCAAC...AGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TTTGCCGATGAGCTCCTTATTTCTGACGTCCAAGGCCATGTTCCGCAGCGCAGTTGGCGTTGCTGCCGGTaGACTCGTAGTCTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: FADELLISDVQGHVPQRSWRCCR*TRSLFS
Trigger: GGAAAACAGACTACGAGTGCACCGGCAGCAACGCCA...ACTGCGCTGCGGAACATGGCCTTGGACGTCAGAAATAAGGAGCTCATCGGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR GCA 90 bp AAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCGACTTGAGACCCAGGTaGATGGTGTACTCGCTGGCG +
Preference number: 4 (lower is better)
Translates to: KEMSCGMHAHALFPERLCDLRPR*MVYSLA
Trigger: CGCCAGCGAGTACACCATGCACCTGGGTCTCAAGTC...GCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCTTCCCGGAGCGCCTGTaGCCTGCTCCTCACACCCAG +
Preference number: 4 (lower is better)
Translates to: QNRKKCLVVCMHMHCSRSFPERL*PAPHTQ
Trigger: CTGGGTGTGAGGAGCAGGGCACAGGCGCTCCGGGAA...GCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CTCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGCACTTCTCGTTACTCTATTCCCGGAGCGCCTGTaGCCTGCTCCTCACACCCAG +
Preference number: 4 (lower is better)
Translates to: LVSPPINHVQYKALLVTLFPERL*PAPHTQ
Trigger: CTGGGTGTGAGGAGCAGGGCACAGGCGCTCCGGGAA...TAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTTGATGGGAGGAGAGACGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CTCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACCCCACCGGCCCGAATaGCTCGTCTCTCCTCCCATC +
Preference number: 4 (lower is better)
Translates to: LVSPPINHVQYKALLVTLPHRPE*LVSPPI
Trigger: GATGGGAGGAGAGACGAGGCATTCGGGCCGGTGGGG...TAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTTGATGGGAGGAGAGACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp ATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCGAGGATGGCAGAGGTaGTTTCTGTTTCAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: MSCGMHAHALFPERLCPARGWQR*FLFQSH
Trigger: ATGGCTCTGAAACAGAAACCACCTCTGCCATCCTCG...AGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCCGAGGATGGCAGAGGTaGTTTCTGTTTCAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: NVLWYACTCTVPGAPVPCRGWQR*FLFQSH
Trigger: ATGGCTCTGAAACAGAAACCACCTCTGCCATCCTCG...GCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GTGTGTAAACTATTCTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCTGGCTGAAGCTCTaGCCCGTAGCTCGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: VCKLFCVLCLTITLTPHRPWLKL*PVARAC
Trigger: ACAAGCCCGAGCTACGGGCCAGAGCTTCAGCCAGGG...CCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAGAATAGTTTACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CCA 90 bp ACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGGCGGCGCGGGCAGCGTaGAGCTGGAGTAGTAGAGCG +
Preference number: 4 (lower is better)
Translates to: TKQKEMSCGMHAHALFPEAARAA*SWSSRA
Trigger: CGCTCTACTACTCCAGCTCCACGCTGCCCGCGCCGC...CTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CCA 90 bp AAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCTGGTGCTGTAGGACTTaGCCAGGCGGCTGGGCGACT +
Preference number: 4 (lower is better)
Translates to: KQKEMSCGMHAHALFPERWCCRT*PGGWAT
Trigger: AGTCGCCCAGCCGCCTGGCCAAGTCCTACAGCACCA...GCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CCA 90 bp TACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTTAGGATCACTTGGTGGGCGACAGGGTaGCGTACGTGCCGATGGTGG +
Preference number: 4 (lower is better)
Translates to: YSTAHARKVLPTVIFRITWWATG*RTCRWW
Trigger: CCACCATCGGCACGTACGCCACCCTGTCGCCCACCA...AGTGATCCTAAATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CCA 90 bp ACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGTGGACCAGGCGCTTaGTGGGCGACAGGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: TKQKEMSCGMHAHALFPERGPGA*WATGWR
Trigger: ACGCCACCCTGTCGCCCACCAAGCGCCTGGTCCACG...CTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CCA 90 bp TCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACCCGGCCTCTGGAGGGTaGCCGTGGCATACAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SSLLPSTTFSIKHFSLLYPASGG*PWHTAP
Trigger: AGGAGCTGTATGCCACGGCCACCCTCCAGAGGCCGG...GTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTTGATGGGAGGAGAGACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CCA 90 bp CCCCAATGCAACCTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCCCCAGGTGCCCATGCTaGCTGCTGTATGAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: PQCNLKPRVTTDEESKQSPRCPC*LLYEAR
Trigger: CCGAGCCTCATACAGCAGCCAGCATGGGCACCTGGG...GCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAGGTTGCATTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCTAGAGTCCCCAGGTGCCCATGCTaGCTGCTGTATGAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: QETSCCTEEPQCNLKPRVPRCPC*LLYEAR
Trigger: CCGAGCCTCATACAGCAGCCAGCATGGGCACCTGGG...GACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACTGGCCCTCTGGAAGGTaGCCGCGGCGGCATTCTGTG +
Preference number: 4 (lower is better)
Translates to: SSLLPSTTFSIKHFSLLYWPSGR*PRRHSV
Trigger: CACAGAATGCCGCCGCGGCCACCTTCCAGAGGGCCA...GTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTTGATGGGAGGAGAGACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCTAGAGTCCAATGGACGGGGACCTaGCCAAGGTGCCTTCAGGCG +
Preference number: 4 (lower is better)
Translates to: QETSCCTEEPQCNLKPRVQWTGT*PRCLQA
Trigger: CGCCTGAAGGCACCTTGGCCAGGTCCCCGTCCATTG...GACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TTGCTGAGCGGTTGTTGGGAGACACGCGCACAGGGGAGATGGAGGGCGTGCGGGTCCATCCAAATTCTCTaGGATCTTTCTGAATGCTAT +
Preference number: 4 (lower is better)
Translates to: LLSGCWETRAQGRWRACGSIQIL*DLSECY
Trigger: ATAGCATTCAGAAAGATCCCAGAGAATTTGGATGGA...CCCGCACGCCCTCCATCTCCCCTGTGCGCGTGTCTCCCAACAACCGCTCAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR CCA 90 bp TCTGAAATGGCTGGTAGGTCTCGTAATCTTTTCTGCTGGGCTCCTGTGGGACTGCTCCCCAGCGCAGACTaGATCACGTACAGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: SEMAGRSRNLFCWAPVGLLPSAD*ITYSKA
Trigger: TGCCTTGCTGTACGTGATCCAGTCTGCGCTGGGGAG...CAGTCCCACAGGAGCCCAGCAGAAAAGATTACGAGACCTACCAGCCATTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCAGCATCCTTGCCATTaGCCTCGCCACAGAGTAGCC +
Preference number: 4 (lower is better)
Translates to: KEMSCGMHAHALFPERLCQHPCH*PRHRVA
Trigger: GGCTACTCTGTGGCGAGGCCAATGGCAAGGATGCTG...GCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGAAGCCGTCCCCCACACAGTCAGCATCCTTGCCATTaGCCTCGCCACAGAGTAGCC +
Preference number: 4 (lower is better)
Translates to: VTTDEESKQSVRSRPPHSQHPCH*PRHRVA
Trigger: GGCTACTCTGTGGCGAGGCCAATGGCAAGGATGCTG...ACTGTGTGGGGGACGGCTTCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCTGTTCCGCAGCGCAGTaGCCACCGCGCACACCACAC +
Preference number: 4 (lower is better)
Translates to: QNRKKCLVVCMHMHCSRSCSAAQ*PPRTPH
Trigger: GTGTGGTGTGCGCGGTGGCCACTGCGCTGCGGAACA...GCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp ATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCTGTGTCATCCGACATaGCCTTGCTTGCAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: MSCGMHAHALFPERLCPALCHPT*PCLQCC
Trigger: ACAACACTGCAAGCAAGGCCATGTCGGATGACACAG...AGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTTGCTGAGCGGTTGTTaGGAGACACGCGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: NRKKCLVVCMHMHCSRSALLSGC*ETRAQG
Trigger: CCCCTGTGCGCGTGTCTCCCAACAACCGCTCAGCAA...GGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTCGTAATCTTTTCTGCTaGGCTCCTGTGGGACTGGCT +
Preference number: 4 (lower is better)
Translates to: EMSCGMHAHALFPERLCPRNLFC*APVGLA
Trigger: AGCCAGTCCCACAGGAGCCCAGCAGAAAAGATTACG...AGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCCTCACACCCTGTGGAATTCTGAAATaGCTGGTAGGTCTCGTAATC +
Preference number: 4 (lower is better)
Translates to: VCMHMHCSRSACALLLTPCGILK*LVGLVI
Trigger: GATTACGAGACCTACCAGCCATTTCAGAATTCCACA...GGGTGTGAGGAGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCGCGGGAGGGCGATGGTaGACCTGGTCCTCGAAGAAG +
Preference number: 4 (lower is better)
Translates to: KQKEMSCGMHAHALFPERAGGRW*TWSSKK
Trigger: CTTCTTCGAGGACCAGGTCCACCATCGCCCTCCCGC...GCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TGCAACCTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGACTGGCGGGAGGGCGATaGTGGACCTGGTCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: CNLKPRVTTDEESKQSVRLAGGR*WTWSSK
Trigger: CTTCGAGGACCAGGTCCACCATCGCCCTCCCGCCAG...TCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAGGTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp ACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTTTGTTCCGCAGCGCAGTaGCCACCGCACACCACACGG +
Preference number: 4 (lower is better)
Translates to: TSRYSTAHARKVLPTVIFCSAAQ*PPHTTR
Trigger: CCGTGTGGTGTGCGGTGGCCACTGCGCTGCGGAACA...AAATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458100.6
3UTR CAA 72 bp ACTGTGTCATCCGACATGGCCTTGCTTGCAGTGTTGTaGCTGTTGTTCCCTCCTGGAAGCCTGTGGACTAGG +
Preference number: 4 (lower is better)
Translates to: TVSSDMALLAVL*LLFPPGSLWTR
Trigger: CCTAGTCCACAGGCTTCCAGGAGGGAACAACAGCAACAACACTGCAAGCAAGGCCATGTCGGATGACACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR CAA 72 bp GTCACTGTGTCATCCGACATGGCCTTGCTTGCAGTGTaGTTGCTGTTGTTCCCTCCTGGAAGCCTGTGGACT +
Preference number: 4 (lower is better)
Translates to: VTVSSDMALLAV*LLLFPPGSLWT
Trigger: AGTCCACAGGCTTCCAGGAGGGAACAACAGCAACAACACTGCAAGCAAGGCCATGTCGGATGACACAGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR CAA 72 bp CAGCAGACAGCTGTCACTGTGTCATCCGACATGGCCTaGCTTGCAGTGTTGTTGCTGTTGTTCCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: QQTAVTVSSDMA*LAVLLLLFPPG
Trigger: TCCAGGAGGGAACAACAGCAACAACACTGCAAGCAAGGCCATGTCGGATGACACAGTGACAGCTGTCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR CAA 72 bp AGGAGGAGTAGGGCCTTTGCCGGTCCCTCTCGATGGTaGAAGACGAGGCTACAAAGTGGTATTGTGACCATC +
Preference number: 4 (lower is better)
Translates to: RRSRAFAGPSRW*KTRLQSGIVTI
Trigger: GATGGTCACAATACCACTTTGTAGCCTCGTCTTCAACCATCGAGAGGGACCGGCAAAGGCCCTACTCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR TCA 90 bp ATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTTCTTGTGACTGCCACTaGAACTGCTCTTCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: MSCGMHAHALFPERLCPASCDCH*NCSSAE
Trigger: TTCAGCAGAAGAGCAGTTTCAGTGGCAGTCACAAGA...AGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp CTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCCTCGTCTCTCCTTTTTGACCATCTTGTaGCTGCCACTGAAACTGCTC +
Preference number: 4 (lower is better)
Translates to: LVLNDNPYAPPARMPRLSFLTIL*LPLKLL
Trigger: GAGCAGTTTCAGTGGCAGTCACAAGATGGTCAAAAA...GGAGAGACGAGGCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp GCACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTCCAAAGGACTCCTGTaGCCAGCTCCCGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: ALLVTLQLTLERCCPLSYSKGLL*PAPGSP
Trigger: TGGAGATCCGGGAGCTGGTCACAGGAGTCCTTTGGA...ATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp GGTGCCACAGCATCTGGATCCCTTTTGGTGGTTCAGCACAGTCTGGAAGAGGTCGTAGGGTTTGACTATTaGTGGGTGCCACAGCATCTG +
Preference number: 4 (lower is better)
Translates to: GATASGSLLVVQHSLEEVVGFDY*WVPQHL
Trigger: CAGATGCTGTGGCACCCATCAATAGTCAAACCCTAC...GACCTCTTCCAGACTGTGCTGAACCACCAAAAGGGATCCAGATGCTGTGGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR TCA 90 bp AAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCAGCGTGTCTGGATTTaGGCACTCAGAGAGCAGTGT +
Preference number: 4 (lower is better)
Translates to: KKCLVVCMHMHCSRSACAQRVWI*ALREQC
Trigger: ACACTGCTCTCTGAGTGCTCAAATCCAGACACGCTG...GGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp AGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCCCTGAGATGCAGCCTTaGCCACTTTTGGAGAGTGTT +
Preference number: 4 (lower is better)
Translates to: RNVLWYACTCTVPGAPVPPEMQP*PLLESV
Trigger: AACACTCTCCAAAAGTGGTCAAGGCTGCATCTCAGG...GGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp GAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTTGGGACTGGCTGTGCTaGAACCTGGTTGTGTTTGAT +
Preference number: 4 (lower is better)
Translates to: EMSCGMHAHALFPERLCPWDWLC*NLVVFD
Trigger: ATCAAACACAACCAGGTTTCAGCACAGCCAGTCCCA...AGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp AAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCGTAGGGACGGGCAGCTaGGTAGAAGTCAACGTAGTT +
Preference number: 4 (lower is better)
Translates to: KKCLVVCMHMHCSRSACAVGTGS*VEVNVV
Trigger: AACTACGTTGACTTCTACTCAGCTGCCCGTCCCTAC...GGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp GGCCTCAGCCACTTGCATCTAAAGAGCAAAGCTAGTTTACCCGCGGCCCATGTTAGAGTAAACAAAGCGTaGGAAGCCGTCCCCCACACA +
Preference number: 4 (lower is better)
Translates to: GLSHLHLKSKASLPAAHVRVNKA*EAVPHT
Trigger: TGTGTGGGGGACGGCTTCTCACGCTTTGTTTACTCT...AACATGGGCCGCGGGTAAACTAGCTTTGCTCTTTAGATGCAAGTGGCTGAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304623.13
CDS-3UTR TCA 90 bp AAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCATGCTGGCTGCTGTATaGGGCTCGGGAACCAGTTTC +
Preference number: 4 (lower is better)
Translates to: KEMSCGMHAHALFPERLCMLAAV*GSGTSF
Trigger: GAAACTGGTTCCCGAGCCTCATACAGCAGCCAGCAT...GCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503622.5
ENST00000513588.5
CDS-3UTR TCA 90 bp GAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGATGCTGGCTGCTGTATaGGGCTCGGGAACCAGTTTC +
Preference number: 4 (lower is better)
Translates to: ERNVLWYACTCTVPGAPVMLAAV*GSGTSF
Trigger: GAAACTGGTTCCCGAGCCTCATACAGCAGCCAGCAT...CACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503622.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GTTCACTGTAGGGACGGGCAGCTGAGTAGAAGTCAACGTAGTTGCCGGTGGACTCTGACCTTGCCCAACTaGAGCATCTTCCGCTTTTGT +
Preference number: 4 (lower is better)
Translates to: VHCRDGQLSRSQRSCRWTLTLPN*SIFRFC
Trigger: ACAAAAGCGGAAGATGCTGCAGTTGGGCAAGGTCAG...AGTCCACCGGCAACTACGTTGACTTCTACTCAGCTGCCCGTCCCTACAGTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CAAAAGGCAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCTCTCGGATCCGAGCTTaGATCGCTCCAGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QKARNILLYRGTPMQPEASRIRA*IAPAGW
Trigger: CCAGCCAGCTGGAGCGATGCAAGCTCGGATCCGAGA...GGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTGCCTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CCCCAATGCAACCTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCTCTCGGATCCGAGCTTaGATCGCTCCAGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: PQCNLKPRVTTDEESKQSSRIRA*IAPAGW
Trigger: CCAGCCAGCTGGAGCGATGCAAGCTCGGATCCGAGA...GCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAGGTTGCATTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTCTTCTGCTGAACTCATaGTGCTCATGCTGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: EMSCGMHAHALFPERLCPLLLNS*CSCCQS
Trigger: AGACTGGCAGCATGAGCAGCATGAGTTCAGCAGAAG...AGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TTTGCCGATGAGCTCCTTATTTCTGACGTCCAAGGCCATGTTCCGCAGCGCAGTGGAATTGAGCTGAAGTaGACTCTGGGAGAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: FADELLISDVQGHVPQRSGIELK*TLGEQA
Trigger: AGCCTGCTCTCCCAGAGTGCACTTCAGCTCAATTCC...ACTGCGCTGCGGAACATGGCCTTGGACGTCAGAAATAAGGAGCTCATCGGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR GCA 90 bp CTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACGCCGAGCCGCCGCGCTaGAGCTTGGTGGGCGAACCG +
Preference number: 4 (lower is better)
Translates to: LLIFPYWLSQPSYGTGFNAEPPR*SLVGEP
Trigger: CGGTTCGCCCACCAAGCTGCAGCGCGGCGGCTCGGC...GTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR GCA 90 bp TACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATTTGCAGAGGCGGCTGGGCGACTaGTTGGGCGAGGAGCCGCGC +
Preference number: 4 (lower is better)
Translates to: YWLSQPSYGTGFNKLNLQRRLGD*LGEEPR
Trigger: GCGCGGCTCCTCGCCCAAGCAGTCGCCCAGCCGCCT...CTGCAAATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR GCA 90 bp TACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTTAGGATCACTTGGTGTTCTGGGGACTaGAGGGCCCGCAACTCTGGG +
Preference number: 4 (lower is better)
Translates to: YSTAHARKVLPTVIFRITWCSGD*RARNSG
Trigger: CCCAGAGTTGCGGGCCCTGCAGTCCCCAGAACACCA...AGTGATCCTAAATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGTGCTCGTGCGGTAGGTaGCGGTGTGTGCTGGCGGCA +
Preference number: 4 (lower is better)
Translates to: NHVQYKALLVTLQLTLERCSCGR*RCVLAA
Trigger: TGCCGCCAGCACACACCGGCACCTACCGCACGAGCA...CCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp ACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGGGGAAGATGGGGCTGTaGTCGTGCGGTAGGTGCCGG +
Preference number: 4 (lower is better)
Translates to: TKQKEMSCGMHAHALFPEGKMGL*SCGRCR
Trigger: CCGGCACCTACCGCACGAGCACAGCCCCATCTTCCC...CTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTTAGGATCACTTTAGCTTTCTGGCTGCCTGTGCGCTaGAAGGGGACGGAGTCGACA +
Preference number: 4 (lower is better)
Translates to: AHARKVLPTVIFRITLAFWLPVR*KGTEST
Trigger: TGTCGACTCCGTCCCCTTGCAGCGCACAGGCAGCCA...GAAAGCTAAAGTGATCCTAAATATGACAGTGGGCAGCACCTTTCTAGCGTGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCTGGCTGCCTGTGCGCTaGAAGGGGACGGAGTCGACA +
Preference number: 4 (lower is better)
Translates to: QNRKKCLVVCMHMHCSRSWLPVR*KGTEST
Trigger: TGTCGACTCCGTCCCCTTGCAGCGCACAGGCAGCCA...GCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CCCCAATGCAACCTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCTCCCTGAGACGTTTCTaGCGCCAGCCGGTACGAGAG +
Preference number: 4 (lower is better)
Translates to: PQCNLKPRVTTDEESKQSSLRRF*RQPVRE
Trigger: CTCTCGTACCGGCTGGCGGCAGAAACGTCTCAGGGA...GCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAGGTTGCATTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTTAGGATCACTTTAGCTTTCCGTCCAGCTCGTCCGTaGCCATGTGCTGTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: AHARKVLPTVIFRITLAFRPARP*PCAVPE
Trigger: CTCAGGGACAGCACATGGGCACGGACGAGCTGGACG...GAAAGCTAAAGTGATCCTAAATATGACAGTGGGCAGCACCTTTCTAGCGTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCGTTGAGGACCTGAGATaGAGCCTTGACCACTTTTGG +
Preference number: 4 (lower is better)
Translates to: RNVLWYACTCTVPGAPVPVEDLR*SLDHFW
Trigger: CCAAAAGTGGTCAAGGCTGCATCTCAGGTCCTCAAC...GGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGGTTGAGGACCTGAGATaGAGCCTTGACCACTTTTGG +
Preference number: 4 (lower is better)
Translates to: KCLVVCMHMHCSRSACALVEDLR*SLDHFW
Trigger: CCAAAAGTGGTCAAGGCTGCATCTCAGGTCCTCAAC...CAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTCAGATCTCGGTACTaGCACATGCTGTTGAGGACC +
Preference number: 4 (lower is better)
Translates to: KKCLVVCMHMHCSRSACALRSRY*HMLLRT
Trigger: GGTCCTCAACAGCATGTGGCAGTACCGAGATCTGAG...GGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGTCTTGTGGTATGCATaGACATGCACTGTTCCCGGA +
Preference number: 4 (lower is better)
Translates to: EMSCGMHAHALFPERLCPVLWYA*TCTVPG
Trigger: TCCGGGAACAGTGCATGTGCATGCATACCACAAGAC...AGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GTTCACTGTAGGGACGGGCAGCTGAGTAGAAGTCAACGTAGTTGCCGGTGGACTGTCTTGTGGTATGCATaGACATGCACTGTTCCCGGA +
Preference number: 4 (lower is better)
Translates to: VHCRDGQLSRSQRSCRWTVLWYA*TCTVPG
Trigger: TCCGGGAACAGTGCATGTGCATGCATACCACAAGAC...AGTCCACCGGCAACTACGTTGACTTCTACTCAGCTGCCCGTCCCTACAGTGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR GCA 90 bp ACCGGCCCGAATGCCTCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGCACGTCTTGTGGTATGCATaGACATGCACTGTTCCCGGA +
Preference number: 4 (lower is better)
Translates to: TGPNASSLLPSTTFSIKHVLWYA*TCTVPG
Trigger: TCCGGGAACAGTGCATGTGCATGCATACCACAAGAC...GTGCTTTATACTGAACGTGGTTGATGGGAGGAGAGACGAGGCATTCGGGCCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp ATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTCGCCGCGCTGCAGCTTaGTGGGCGAACCGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: IALNISLLVITAFLWNRLRRAAA*WANRPG
Trigger: CCCAGGGCGGTTCGCCCACCAAGCTGCAGCGCGGCG...AAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CCA 90 bp ACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGTGGGCGAGGAGGAGATaGTGGACTGCACGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: TKQKEMSCGMHAHALFPEWARRR*WTARWG
Trigger: CCCCCACCGTGCAGTCCACCATCTCCTCCTCGCCCA...CTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CCA 90 bp CAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCTAGAGTCTGGCGTACGTGCCGATaGTGGAGCTCAGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: QETSCCTEEPQCNLKPRVWRTCR*WSSAGG
Trigger: TCCACCAGCTGAGCTCCACCATCGGCACGTACGCCA...GACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CCA 90 bp TGCAACCTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGACCCAGGTGCCCATGCTaGCTGCTGTATGAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: CNLKPRVTTDEESKQSVRPRCPC*LLYEAR
Trigger: CCGAGCCTCATACAGCAGCCAGCATGGGCACCTGGG...TCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAGGTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CCCACCGGCCCGAATGCCTCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGCGCGGTCTTCATAGATaGGATCTATGTGGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: PTGPNASSLLPSTTFSIKRGLHR*DLCGVL
Trigger: CAGAACACCACATAGATCCCATCTATGAAGACCGCG...CTTTATACTGAACGTGGTTGATGGGAGGAGAGACGAGGCATTCGGGCCGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp ACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGAGGGGTCCGCGTAATTaGAGGCTGGGCCGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: TKQKEMSCGMHAHALFPERGPRN*RLGRRH
Trigger: ATGCCGCCGGCCCAGCCTCCAATTACGCGGACCCCT...CTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GGACCTGGTCCTCGAAGAAGGACTCATCGTAATTTCTTGTGGAATTCTGAAATGAGGGGTCCGCGTAATTaGAGGCTGGGCCGGCGGCAT +
Preference number: 4 (lower is better)
Translates to: GPGPRRRTHRNFLWNSEMRGPRN*RLGRRH
Trigger: ATGCCGCCGGCCCAGCCTCCAATTACGCGGACCCCT...CATTTCAGAATTCCACAAGAAATTACGATGAGTCCTTCTTCGAGGACCAGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCCAATGGACGGGGACCTaGCCAAGGTGCCTTCAGGCG +
Preference number: 4 (lower is better)
Translates to: QNRKKCLVVCMHMHCSRSQWTGT*PRCLQA
Trigger: CGCCTGAAGGCACCTTGGCCAGGTCCCCGTCCATTG...GCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCTTTTCCCAGCCTGAGTaGGGGATAATCACCGCGTTG +
Preference number: 4 (lower is better)
Translates to: KKCLVVCMHMHCSRSACAFSQPE*GIITAL
Trigger: CAACGCGGTGATTATCCCCCACTCAGGCTGGGAAAA...GGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCCTCCCCAGCGCAGACTaGATCACGTACAGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: NRKKCLVVCMHMHCSRSALPSAD*ITYSKA
Trigger: TGCCTTGCTGTACGTGATCCAGTCTGCGCTGGGGAG...GGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AGGGAAACTGGTGCTGCAACATCTGAATCACTTCCGGCAGTTCCGGGTCTCTCCTGGTTCAGCACAGTCTaGAAGAGGTCCTACTCCATC +
Preference number: 4 (lower is better)
Translates to: RETGAATSESLPAVPGLSWFSTV*KRSYSI
Trigger: GATGGAGTAGGACCTCTTCCAGACTGTGCTGAACCA...GGAGAGACCCGGAACTGCCGGAAGTGATTCAGATGTTGCAGCACCAGTTTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR CCA 90 bp ACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGTGTTCCGCAGCGCAGTaGCCACCGCGCACACCACAC +
Preference number: 4 (lower is better)
Translates to: TKQKEMSCGMHAHALFPECSAAQ*PPRTPH
Trigger: GTGTGGTGTGCGCGGTGGCCACTGCGCTGCGGAACA...CTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GGTGCCACAGCATCTGGATCCCTTTTGGTGGTTCAGCACAGTCTGGAAGAGGTCCTGTGTCATCCGACATaGCCTTGCTTGCAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: GATASGSLLVVQHSLEEVLCHPT*PCLQCC
Trigger: ACAACACTGCAAGCAAGGCCATGTCGGATGACACAG...GACCTCTTCCAGACTGTGCTGAACCACCAAAAGGGATCCAGATGCTGTGGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR CCA 90 bp CTATTCTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCCATCCCGTAAGGCCTTaGCGTTCTCCATGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: LFCVLCLTITLTPHRPECHPVRP*RSPCSW
Trigger: CCAAGAACATGGAGAACGCCAAGGCCTTACGGGATG...GCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAGAATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCGCCGGTCCCTCTCGATaGTTGAAGACGAGGCTACAA +
Preference number: 4 (lower is better)
Translates to: KEMSCGMHAHALFPERLCAGPSR*LKTRLQ
Trigger: TTGTAGCCTCGTCTTCAACCATCGAGAGGGACCGGC...GCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CAAAAGGCAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCTTGCTGAGCGGTTGTTaGGAGACACGCGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: QKARNILLYRGTPMQPEALLSGC*ETRAQG
Trigger: CCCCTGTGCGCGTGTCTCCCAACAACCGCTCAGCAA...GGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTGCCTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCTAGAGTCACAACGGATGAAGGGCGATGGTGGACCTaGTCCTCGAAGAAGGACTCA +
Preference number: 4 (lower is better)
Translates to: CCTEEPQCNLKPRVTTDEGRWWT*SSKKDS
Trigger: TGAGTCCTTCTTCGAGGACCAGGTCCACCATCGCCC...TTCATCCGTTGTGACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCGGGCGATGGTGGACCTaGTCCTCGAAGAAGGACTCA +
Preference number: 4 (lower is better)
Translates to: NRKKCLVVCMHMHCSRSAGRWWT*SSKKDS
Trigger: TGAGTCCTTCTTCGAGGACCAGGTCCACCATCGCCC...GGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACGCGGGAGGGCGATGGTaGACCTGGTCCTCGAAGAAG +
Preference number: 4 (lower is better)
Translates to: SSLLPSTTFSIKHFSLLYAGGRW*TWSSKK
Trigger: CTTCTTCGAGGACCAGGTCCACCATCGCCCTCCCGC...GTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTTGATGGGAGGAGAGACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CTCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGCACTTCTCGTTACTCTATCCTTCCCCAGGCTGTaGAGCAGGCGGTTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: LVSPPINHVQYKALLVTLSFPRL*SRRFLA
Trigger: TGCCAGGAACCGCCTGCTCCACAGCCTGGGGAAGGA...TAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTTGATGGGAGGAGAGACGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511377.5
CDS-3UTR TCA 90 bp AGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCAAACTGCTCTTCTGCTaGACTCATGCTGCTCATGCT +
Preference number: 4 (lower is better)
Translates to: RNVLWYACTCTVPGAPVPKLLFC*THAAHA
Trigger: AGCATGAGCAGCATGAGTTCAGCAGAAGAGCAGTTT...GGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp TCCTATACAAAGTTGAAATTCCAGTGTTTTGAGCTGTCATGGCATCTTTCCTGGTCGGGCCGGGAGCTGTaGAGGGGTGGTTTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: SYTKLKFQCFELSWHLSWSGREL*RGGFPQ
Trigger: CTGGGGGAAACCACCCCTTCACAGCTCCCGGCCCGA...CCAGGAAAGATGCCATGACAGCTCAAAACACTGGAATTTCAACTTTGTATAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR TCA 90 bp GAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTTCTCTGGGATCTTTCTaGATGCTATCAATGGACGGG +
Preference number: 4 (lower is better)
Translates to: EMSCGMHAHALFPERLCPSLGSF*MLSMDG
Trigger: CCCGTCCATTGATAGCATTCAGAAAGATCCCAGAGA...AGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp GTGTGTAAACTATTCTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGTCCAAAGGACTCCTGTaGCCAGCTCCCGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: VCKLFCVLCLTITLTPHRSKGLL*PAPGSP
Trigger: TGGAGATCCGGGAGCTGGTCACAGGAGTCCTTTGGA...CCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAGAATAGTTTACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp GCACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATCGAATTTTCCCAGCCTaGGTGGGGGATAATCACCGC +
Preference number: 4 (lower is better)
Translates to: ALLVTLQLTLERCCPLSYRIFPA*VGDNHR
Trigger: GCGGTGATTATCCCCCACTCAGGCTGGGAAAATTCG...ATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp TGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCTAGAGTCACAACGGATGAACGAATTTTCCCAGCCTaGGTGGGGGATAATCACCGC +
Preference number: 4 (lower is better)
Translates to: CCTEEPQCNLKPRVTTDERIFPA*VGDNHR
Trigger: GCGGTGATTATCCCCCACTCAGGCTGGGAAAATTCG...TTCATCCGTTGTGACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp CTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCCTCGTATTTTCCGATCATCCTaGAGAGGCGAATTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: LCLVLNDNPYAPPARMPRIFRSS*RGEFSQ
Trigger: CTGGGAAAATTCGCCTCTTCAGGATGATCGGAAAAT...ACGAGGCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp AAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCCTGAGATGCAGCCTTaGCCACTTTTGGAGAGTGTT +
Preference number: 4 (lower is better)
Translates to: KKCLVVCMHMHCSRSACAPEMQP*PLLESV
Trigger: AACACTCTCCAAAAGTGGTCAAGGCTGCATCTCAGG...GGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp GCACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATACTGCCACATGCTGTTaGGGACCTGAGATGCAGCCT +
Preference number: 4 (lower is better)
Translates to: ALLVTLQLTLERCCPLSYTATCC*GPEMQP
Trigger: AGGCTGCATCTCAGGTCCTCAACAGCATGTGGCAGT...ATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp GAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGGTCCCTCTCGATGGTTaGAGACGAGGCTACAAAGTG +
Preference number: 4 (lower is better)
Translates to: ERNVLWYACTCTVPGAPVVPLDG*RRGYKV
Trigger: CACTTTGTAGCCTCGTCTTCAACCATCGAGAGGGAC...CACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp GTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGAAGCCGTCCCCCACACAGTAAACCTGGTTGTGTTTaGTGTCTTCAGCGGGCGCAC +
Preference number: 4 (lower is better)
Translates to: VTTDEESKQSVRSRPPHSKPGCV*CLQRAH
Trigger: GTGCGCCCGCTGAAGACATCAAACACAACCAGGTTT...ACTGTGTGGGGGACGGCTTCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp CTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGAAGCCGTAGTTGCCGGTGGACTTaGGACCCAGGTGCATGGTGT +
Preference number: 4 (lower is better)
Translates to: LKPRVTTDEESKQSVRSRSCRWT*DPGAWC
Trigger: ACACCATGCACCTGGGTCTCAAGTCCACCGGCAACT...ACGGCTTCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp AAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCAGTTGCCGGTGGACTTaGGACCCAGGTGCATGGTGT +
Preference number: 4 (lower is better)
Translates to: KQKEMSCGMHAHALFPERSCRWT*DPGAWC
Trigger: ACACCATGCACCTGGGTCTCAAGTCCACCGGCAACT...GCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp GTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGAAGCCGTCCCCCACACAGTAACCCCAATGCAACCTaGAGCCTAGAGTCACAACGG +
Preference number: 4 (lower is better)
Translates to: VTTDEESKQSVRSRPPHSNPNAT*SLESQR
Trigger: CCGTTGTGACTCTAGGCTTCAGGTTGCATTGGGGTT...ACTGTGTGGGGGACGGCTTCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGACCTTGCCCAACTaGAGCATCTTCCGCTTTTGT +
Preference number: 4 (lower is better)
Translates to: KKCLVVCMHMHCSRSACALTLPN*SIFRFC
Trigger: ACAAAAGCGGAAGATGCTGCAGTTGGGCAAGGTCAG...GGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCTGGCTGGCTACGATCTaGCGTTCAGCCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: KQKEMSCGMHAHALFPERWLATI*RSASSS
Trigger: AGAGCTGGAGGCTGAACGGCAGATCGTAGCCAGCCA...GCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCTCTCGGATCCGAGCTTaGATCGCTCCAGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QNRKKCLVVCMHMHCSRSSRIRA*IAPAGW
Trigger: CCAGCCAGCTGGAGCGATGCAAGCTCGGATCCGAGA...GCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGAAGCCGTCCCCCACACAGTAACTCATGCTGCTCATaGTGCCAGTCTCGGATCCGA +
Preference number: 4 (lower is better)
Translates to: VTTDEESKQSVRSRPPHSNSCCS*CQSRIR
Trigger: TCGGATCCGAGACTGGCAGCATGAGCAGCATGAGTT...ACTGTGTGGGGGACGGCTTCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCCTGCTGAACTCATGCTaGTCATGCTGCCAGTCTCGG +
Preference number: 4 (lower is better)
Translates to: NRKKCLVVCMHMHCSRSALLNSC*SCCQSR
Trigger: CCGAGACTGGCAGCATGAGCAGCATGAGTTCAGCAG...GGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TGCAACCTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGAGGGCCAGGGTCTGGTTaGTATGGTAGCTGGCCGGAT +
Preference number: 4 (lower is better)
Translates to: CNLKPRVTTDEESKQSVRGPGSG*YGSWPD
Trigger: ATCCGGCCAGCTACCATAGCAACCAGACCCTGGCCC...TCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAGGTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR GCA 90 bp GCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTTAGGATCACTTTAGCTTTCGCTCCTGCGAGTGCTTaGTGTACTGCTCGGACGCGT +
Preference number: 4 (lower is better)
Translates to: AHARKVLPTVIFRITLAFAPASA*CTARTR
Trigger: ACGCGTCCGAGCAGTACAGCAAGCACTCGCAGGAGC...GAAAGCTAAAGTGATCCTAAATATGACAGTGGGCAGCACCTTTCTAGCGTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR GCA 90 bp TTTTCTGTGGATACTTCAAGTAATTGGCCCCAAAGTGAAACTGAATTGGCCATGGTAGGTGCCGGTGTGTaGTGGCGGCAGAGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: FSVDTSSNWPQSETELAMVGAGV*WRQRVP
Trigger: GGGGACCCTCTGCCGCCAGCACACACCGGCACCTAC...CATGGCCAATTCAGTTTCACTTTGGGGCCAATTACTTGAAGTATCCACAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304623.13
CDS-3UTR GCA 90 bp AAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGTGGGATCTTTCTGAATaGTATCAATGGACGGGGACC +
Preference number: 4 (lower is better)
Translates to: KCLVVCMHMHCSRSACALWDLSE*YQWTGT
Trigger: GGTCCCCGTCCATTGATAGCATTCAGAAAGATCCCA...CAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GCACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATGTGTTGCAAGTAGGCTaGCGCGTTAGACTGGACCGA +
Preference number: 4 (lower is better)
Translates to: ALLVTLQLTLERCCPLSYVLQVG*RVRLDR
Trigger: TCGGTCCAGTCTAACGCGGCAGCCTACTTGCAACAC...ATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGTCACCAGTGCTGGGATaGCACCACAGTTTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: ERNVLWYACTCTVPGAPVSPVLG*HHSFSG
Trigger: CCCTGAAAAACTGTGGTGGCATCCCAGCACTGGTGA...CACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGAAGCCGTCCCCCACACAGTTCACCAGTGCTGGGATaGCACCACAGTTTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: VTTDEESKQSVRSRPPHSSPVLG*HHSFSG
Trigger: CCCTGAAAAACTGTGGTGGCATCCCAGCACTGGTGA...ACTGTGTGGGGGACGGCTTCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGCTATCGATCTCACTaGTCCCCAGCGCAGACTGGA +
Preference number: 4 (lower is better)
Translates to: NRKKCLVVCMHMHCSRSACYRSH*SPAQTG
Trigger: TCCAGTCTGCGCTGGGGAGCAGTGAGATCGATAGCA...GGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGTTGACTATTGATGGGTaGCACAGCATCTGGATCCCT +
Preference number: 4 (lower is better)
Translates to: KCLVVCMHMHCSRSACALLTIDG*HSIWIP
Trigger: AGGGATCCAGATGCTGTGGCACCCATCAATAGTCAA...CAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCGACATGGCCTTGCTTaGAGTGTTGTTGCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: KCLVVCMHMHCSRSACALRHGLA*SVVAVV
Trigger: AACAACAGCAACAACACTGCAAGCAAGGCCATGTCG...CAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGTCACTTCGTGCAGTGTaGAGCAGACAGCTGTCACTG +
Preference number: 4 (lower is better)
Translates to: ERNVLWYACTCTVPGAPVSLRAV*SRQLSL
Trigger: CAGTGACAGCTGTCTGCTGCACACTGCACGAAGTGA...CACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTTGGTAATCACTTCGTaGAGTGTGCAGCAGACAGCT +
Preference number: 4 (lower is better)
Translates to: RNVLWYACTCTVPGAPVPLVITS*SVQQTA
Trigger: AGCTGTCTGCTGCACACTGCACGAAGTGATTACCAA...GGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GTGTGTAAACTATTCTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGCGACCAACTTCTCGATaGCACCGGCATCCCGTAAGG +
Preference number: 4 (lower is better)
Translates to: VCKLFCVLCLTITLTPHRRPTSR*HRHPVR
Trigger: CCTTACGGGATGCCGGTGGCATCGAGAAGTTGGTCG...CCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAGAATAGTTTACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCCTTTGCTTTTGGAGATaGCGACCAACTTCTCGATGC +
Preference number: 4 (lower is better)
Translates to: RNVLWYACTCTVPGAPVPLCFWR*RPTSRC
Trigger: GCATCGAGAAGTTGGTCGGCATCTCCAAAAGCAAAG...GGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCAGTGTTTATCTCCTTTaGTTTTGGAGATGCCGACCA +
Preference number: 4 (lower is better)
Translates to: CLVVCMHMHCSRSACALLSVYLL*FWRCRP
Trigger: TGGTCGGCATCTCCAAAAGCAAAGGAGATAAACACT...GAGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCTCAGATCTCGGTACTaGCACATGCTGTTGAGGACC +
Preference number: 4 (lower is better)
Translates to: ERNVLWYACTCTVPGAPVLRSRY*HMLLRT
Trigger: GGTCCTCAACAGCATGTGGCAGTACCGAGATCTGAG...CACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TGCAACCTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGAGGTAGGTGGCGTTGCTaGCGGTGCACTCGTAGTCTG +
Preference number: 4 (lower is better)
Translates to: CNLKPRVTTDEESKQSVRGRWRC*RCTRSL
Trigger: CAGACTACGAGTGCACCGGCAGCAACGCCACCTACC...TCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAGGTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CTATTCTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCTCTCGTAATCTTTTCTaGTGGGCTCCTGTGGGACTG +
Preference number: 4 (lower is better)
Translates to: LFCVLCLTITLTPHRPECSRNLF*WAPVGL
Trigger: CAGTCCCACAGGAGCCCAGCAGAAAAGATTACGAGA...GCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAGAATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCTAGAGTCGACTTGAGACCCAGGTaGATGGTGTACTCGCTGGCG +
Preference number: 4 (lower is better)
Translates to: QETSCCTEEPQCNLKPRVDLRPR*MVYSLA
Trigger: CGCCAGCGAGTACACCATGCACCTGGGTCTCAAGTC...GACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GCACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTGGTATGCATGCACATaGACTGTTCCCGGAGCGCCT +
Preference number: 4 (lower is better)
Translates to: ALLVTLQLTLERCCPLSYWYACT*TVPGAP
Trigger: AGGCGCTCCGGGAACAGTGCATGTGCATGCATACCA...ATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCCTCGTACGCTAGAAAGGTGCTaGCCACTGTCATATTTAGGA +
Preference number: 4 (lower is better)
Translates to: LCLVLNDNPYAPPARMPRTLERC*PLSYLG
Trigger: TCCTAAATATGACAGTGGGCAGCACCTTTCTAGCGT...ACGAGGCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CCCACCGGCCCGAATGCCTCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGACGCTAGAAAGGTGCTaGCCACTGTCATATTTAGGA +
Preference number: 4 (lower is better)
Translates to: PTGPNASSLLPSTTFSIKTLERC*PLSYLG
Trigger: TCCTAAATATGACAGTGGGCAGCACCTTTCTAGCGT...CTTTATACTGAACGTGGTTGATGGGAGGAGAGACGAGGCATTCGGGCCGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GAGGGCGATGGTGGACCTGGTCCTCGAAGAAGGACTCATCGTAATTTCTTGTGGACAGAGGAACCCCAATaGAACCTGAAGCCTAGAGTC +
Preference number: 4 (lower is better)
Translates to: EGDGGPGPRRRTHRNFLWTEEPQ*NLKPRV
Trigger: GACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGT...CCACAAGAAATTACGATGAGTCCTTCTTCGAGGACCAGGTCCACCATCGCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513588.5
CDS-3UTR GCA 90 bp TGCAACCTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGAGGCATATGCCATGCCTaGCACATCCTCAGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: CNLKPRVTTDEESKQSVRGICHA*HILSPA
Trigger: GGCTGGGCTGAGGATGTGGCAGGCATGGCATATGCC...TCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAGGTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513588.5
CDS-3UTR GCA 90 bp CAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCTAGAGTCGTAGGGCATATGCCATaGCTGCCACATCCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: QETSCCTEEPQCNLKPRVVGHMP*LPHPQP
Trigger: GGGCTGAGGATGTGGCAGGCATGGCATATGCCCTAC...GACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513588.5
CDS-3UTR CCA 90 bp AGTTTTCAACGGTCTTGCTATCGATCTCACTGCTCCCCAGCGCAGACTGGATCAGAGGCTGATGAAGGCTaGTCTGGAACAGGCATAGCT +
Preference number: 4 (lower is better)
Translates to: SFQRSCYRSHCSPAQTGSEADEG*SGTGIA
Trigger: AGCTATGCCTGTTCCAGACCAGCCTTCATCAGCCTC...TGATCCAGTCTGCGCTGGGGAGCAGTGAGATCGATAGCAAGACCGTTGAAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR CCA 90 bp AAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCTTGCATCGCTCCAGCTaGCTGGCTACGATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: KQKEMSCGMHAHALFPERLHRSS*LATICR
Trigger: ACGGCAGATCGTAGCCAGCCAGCTGGAGCGATGCAA...GCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTCGCGGTCTTCATAGATaGGATCTATGTGGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: EMSCGMHAHALFPERLCPRGLHR*DLCGVL
Trigger: CAGAACACCACATAGATCCCATCTATGAAGACCGCG...AGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp ACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGGGGTCCCCCTGGCTCTaGCTGAGACTCCTCATAGGG +
Preference number: 4 (lower is better)
Translates to: TKQKEMSCGMHAHALFPEGSPWL*LRLLIG
Trigger: CCCTATGAGGAGTCTCAGCCAGAGCCAGGGGGACCC...CTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTTAGGATCACTTTAGCTTTCGACACCAGGGGAAGATaGGGCTGTGCTCGTGCGGTA +
Preference number: 4 (lower is better)
Translates to: AHARKVLPTVIFRITLAFDTRGR*GCARAV
Trigger: TACCGCACGAGCACAGCCCCATCTTCCCCTGGTGTC...GAAAGCTAAAGTGATCCTAAATATGACAGTGGGCAGCACCTTTCTAGCGTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGATGGCCCTCTGGAAGGTaGCCGCGGCGGCATTCTGTG +
Preference number: 4 (lower is better)
Translates to: NKTERNVLWYACTCTVPGWPSGR*PRRHSV
Trigger: CACAGAATGCCGCCGCGGCCACCTTCCAGAGGGCCA...TCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TGCAACCTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGAGCTGCCGCGTTAGACTaGACCGAGGGAAACTGGTGC +
Preference number: 4 (lower is better)
Translates to: CNLKPRVTTDEESKQSVRAAALD*TEGNWC
Trigger: GCACCAGTTTCCCTCGGTCCAGTCTAACGCGGCAGC...TCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAGGTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CCCACCGGCCCGAATGCCTCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGACTGCTAGGGCATCCTaGATGATTGGCATTTTGAGT +
Preference number: 4 (lower is better)
Translates to: PTGPNASSLLPSTTFSIKTARAS*MIGILS
Trigger: ACTCAAAATGCCAATCATCCAGGATGCCCTAGCAGT...CTTTATACTGAACGTGGTTGATGGGAGGAGAGACGAGGCATTCGGGCCGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TCGATCTCACTGCTCCCCAGCGCAGACTGGATCACGTACAGCAAGGCATCCGTAACTGCTAGGGCATCCTaGATGATTGGCATTTTGAGT +
Preference number: 4 (lower is better)
Translates to: SISLLPSADWITYSKASVTARAS*MIGILS
Trigger: ACTCAAAATGCCAATCATCCAGGATGCCCTAGCAGT...TACGGATGCCTTGCTGTACGTGATCCAGTCTGCGCTGGGGAGCAGTGAGATCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR CCA 90 bp CTATTCTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCTGGTTCAGCACAGTCTaGAAGAGGTCCTACTCCATC +
Preference number: 4 (lower is better)
Translates to: LFCVLCLTITLTPHRPECWFSTV*KRSYSI
Trigger: GATGGAGTAGGACCTCTTCCAGACTGTGCTGAACCA...GCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAGAATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TGTCATGGCATCTTTCCTGGAAGTGTGTTCGCCTTTAGCTCCGTGGTAGGTGGCCATCTGGATCCCTTTTaGTGGTTCAGCACAGTCTGG +
Preference number: 4 (lower is better)
Translates to: CHGIFPGSVFAFSSVVGGHLDPF*WFSTVW
Trigger: CCAGACTGTGCTGAACCACCAAAAGGGATCCAGATG...GCCACCTACCACGGAGCTAAAGGCGAACACACTTCCAGGAAAGATGCCATGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR CCA 90 bp AAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCATCCCGTAAGGCCTTaGCGTTCTCCATGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: KEMSCGMHAHALFPERLCHPVRP*RSPCSW
Trigger: CCAAGAACATGGAGAACGCCAAGGCCTTACGGGATG...GCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp ACCGGCCCGAATGCCTCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGCACGACGAGGCTACAAAGTaGTATTGTGACCATCCATCC +
Preference number: 4 (lower is better)
Translates to: TGPNASSLLPSTTFSIKHDEATK*YCDHPS
Trigger: GGATGGATGGTCACAATACCACTTTGTAGCCTCGTC...GTGCTTTATACTGAACGTGGTTGATGGGAGGAGAGACGAGGCATTCGGGCCGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCTAGAGTCACAACGGATGAAGCCGGTCCCTCTCGATaGTTGAAGACGAGGCTACAA +
Preference number: 4 (lower is better)
Translates to: CCTEEPQCNLKPRVTTDEAGPSR*LKTRLQ
Trigger: TTGTAGCCTCGTCTTCAACCATCGAGAGGGACCGGC...TTCATCCGTTGTGACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCGGGCGATGGTGGACCTaGTCCTCGAAGAAGGACTCA +
Preference number: 4 (lower is better)
Translates to: KQKEMSCGMHAHALFPERGRWWT*SSKKDS
Trigger: TGAGTCCTTCTTCGAGGACCAGGTCCACCATCGCCC...GCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AACAAAAGGCAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGGCATGGTGTACTCGCTaGCGGGAGGGCGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: NKRQETSCCTEEPQCNLKAWCTR*REGDGG
Trigger: TCCACCATCGCCCTCCCGCCAGCGAGTACACCATGC...CTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTGCCTTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTTTACTAGGCACCTATTaGCCTCAGCCACTTGCATCT +
Preference number: 4 (lower is better)
Translates to: EMSCGMHAHALFPERLCPLLGTY*PQPLAS
Trigger: AGATGCAAGTGGCTGAGGCCAATAGGTGCCTAGTAA...AGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304623.13
CDS-3UTR TCA 90 bp GCACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTTCCTGTTCTTTGACTaGGGCGAGGATGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: ALLVTLQLTLERCCPLSYFLFFD*GEDGRG
Trigger: ACCTCTGCCATCCTCGCCTCAGTCAAAGAACAGGAA...ATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000513588.5
CDS-3UTR TCA 90 bp AACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTTCCTGTTCTTTGACTaGGGCGAGGATGGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: NRKKCLVVCMHMHCSRSAFLFFD*GEDGRG
Trigger: ACCTCTGCCATCCTCGCCTCAGTCAAAGAACAGGAA...GGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000513588.5
CDS-3UTR TCA 90 bp AACAAAAGGCAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGATGCTGGCTGCTGTATaGGGCTCGGGAACCAGCTGC +
Preference number: 4 (lower is better)
Translates to: NKRQETSCCTEEPQCNLKMLAAV*GSGTSC
Trigger: GCAGCTGGTTCCCGAGCCTCATACAGCAGCCAGCAT...CTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTGCCTTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR TCA 90 bp AAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCACTTCGGTCATCCGATaGTCCAACAGGTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: KQKEMSCGMHAHALFPERTSVIR*SNRSTR
Trigger: CCTGGTGGACCTGTTGGATCATCGGATGACCGAAGT...GCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp CCTCCCATCAACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACAGCTCACGCGAATTTTCCCAGCCTaGGTGGGGGATAATCACCGC +
Preference number: 4 (lower is better)
Translates to: PPINHVQYKALLVTLQLTRIFPA*VGDNHR
Trigger: GCGGTGATTATCCCCCACTCAGGCTGGGAAAATTCG...CGTGAGCTGTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTTGATGGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp AACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGACCCATGTGCTGTCCCTaGGACGTTTCTGCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: NKTERNVLWYACTCTVPGPMCCP*DVSAAS
Trigger: GCTGGCGGCAGAAACGTCTCAGGGACAGCACATGGG...TCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp AGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCCCTACTCCATCCCACTaGTCTTGGGATTTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: RNVLWYACTCTVPGAPVPPTPSH*SWDFFF
Trigger: GAAAAAGAAATCCCAAGATCAGTGGGATGGAGTAGG...GGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp AACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCCAGCGTGTCTGGATTTaGGCACTCAGAGAGCAGTGT +
Preference number: 4 (lower is better)
Translates to: NRKKCLVVCMHMHCSRSAQRVWI*ALREQC
Trigger: ACACTGCTCTCTGAGTGCTCAAATCCAGACACGCTG...GGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp CAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCTAGAGTCGGCTCGGATATATACTaGCCACTTCCAGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: QETSCCTEEPQCNLKPRVGSDIY*PLPAPC
Trigger: GCAGGGAGCTGGAAGTGGTCAGTATATATCCGAGCC...GACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
CDS-3UTR TCA 90 bp CCCCAATGCAACCTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCACTGCCACATGCTGTTaGGGACCTGAGATGCAGCCT +
Preference number: 4 (lower is better)
Translates to: PQCNLKPRVTTDEESKQSTATCC*GPEMQP
Trigger: AGGCTGCATCTCAGGTCCTCAACAGCATGTGGCAGT...GCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAGGTTGCATTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp AACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCGTCCCTCTCGATGGTTaGAGACGAGGCTACAAAGTG +
Preference number: 4 (lower is better)
Translates to: NRKKCLVVCMHMHCSRSAVPLDG*RRGYKV
Trigger: CACTTTGTAGCCTCGTCTTCAACCATCGAGAGGGAC...GGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp CAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCAGTTGCCGGTGGACTTaGGACCCAGGTGCATGGTGT +
Preference number: 4 (lower is better)
Translates to: QNRKKCLVVCMHMHCSRSSCRWT*DPGAWC
Trigger: ACACCATGCACCTGGGTCTCAAGTCCACCGGCAACT...GCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp TCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACAGTTGCCGGTGGACTTaGGACCCAGGTGCATGGTGT +
Preference number: 4 (lower is better)
Translates to: SSLLPSTTFSIKHFSLLYSCRWT*DPGAWC
Trigger: ACACCATGCACCTGGGTCTCAAGTCCACCGGCAACT...GTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTTGATGGGAGGAGAGACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCAACTCATGCTGCTCATaGTGCCAGTCTCGGATCCGA +
Preference number: 4 (lower is better)
Translates to: NRKKCLVVCMHMHCSRSANSCCS*CQSRIR
Trigger: TCGGATCCGAGACTGGCAGCATGAGCAGCATGAGTT...GGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGAAGCCGTCCCCCACACAGTCTTCTGCTGAACTCATaGTGCTCATGCTGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: VTTDEESKQSVRSRPPHSLLLNS*CSCCQS
Trigger: AGACTGGCAGCATGAGCAGCATGAGTTCAGCAGAAG...ACTGTGTGGGGGACGGCTTCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GCACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATGGAATTGAGCTGAAGTaGACTCTGGGAGAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: ALLVTLQLTLERCCPLSYGIELK*TLGEQA
Trigger: AGCCTGCTCTCCCAGAGTGCACTTCAGCTCAATTCC...ATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR GCA 90 bp TCTAAAATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCGGCTGGGCGACTaGTTGGGCGAGGAGCCGCGC +
Preference number: 4 (lower is better)
Translates to: SKIALNISLLVITAFLWNRRLGD*LGEEPR
Trigger: GCGCGGCTCCTCGCCCAAGCAGTCGCCCAGCCGCCT...GTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTATTTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR GCA 90 bp AAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCGTGGCATACAGCTCCTaGGAGTGCTTGCTGTACTGC +
Preference number: 4 (lower is better)
Translates to: KQKEMSCGMHAHALFPERVAYSS*ECLLYC
Trigger: GCAGTACAGCAAGCACTCGCAGGAGCTGTATGCCAC...GCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR GCA 90 bp TACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTTAGGATCACTAACTCTGGGCCCAGGTaGCCATGCTGGCTGCTGTAT +
Preference number: 4 (lower is better)
Translates to: YSTAHARKVLPTVIFRITNSGPR*PCWLLY
Trigger: ATACAGCAGCCAGCATGGGCACCTGGGCCCAGAGTT...AGTGATCCTAAATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCAACTCTGGGCCCAGGTaGCCATGCTGGCTGCTGTAT +
Preference number: 4 (lower is better)
Translates to: QNRKKCLVVCMHMHCSRSNSGPR*PCWLLY
Trigger: ATACAGCAGCCAGCATGGGCACCTGGGCCCAGAGTT...GCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTCACCAGTGCTGGGATaGCACCACAGTTTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: NRKKCLVVCMHMHCSRSASPVLG*HHSFSG
Trigger: CCCTGAAAAACTGTGGTGGCATCCCAGCACTGGTGA...GGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCAGCACCTGTGATGAATaGAGCTGTATTTTCCGATCA +
Preference number: 4 (lower is better)
Translates to: NVLWYACTCTVPGAPVPCSTCDE*SCIFRS
Trigger: TGATCGGAAAATACAGCTGCATTCATCACAGGTGCT...GCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCAGTTTTCAACGGTCTTaGTATCGATCTCACTGCTCC +
Preference number: 4 (lower is better)
Translates to: RNVLWYACTCTVPGAPVPSFQRS*YRSHCS
Trigger: GGAGCAGTGAGATCGATAGCAAGACCGTTGAAAACT...GGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp ACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGTCCCTGAGACGTTTCTaGCGCCAGCCGGTACGAGAG +
Preference number: 4 (lower is better)
Translates to: TKQKEMSCGMHAHALFPESLRRF*RQPVRE
Trigger: CTCTCGTACCGGCTGGCGGCAGAAACGTCTCAGGGA...CTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGACGTCCAGCTCGTCCGTaGCCATGTGCTGTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: NKTERNVLWYACTCTVPGRPARP*PCAVPE
Trigger: CTCAGGGACAGCACATGGGCACGGACGAGCTGGACG...TCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GAAGGACTCATCGTAATTTCTTGTGGAATTCTGAAATGGCTGGTAGGTCTCGTACGTCCAGCTCGTCCGTaGCCATGTGCTGTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: EGLIVISCGILKWLVGLVRPARP*PCAVPE
Trigger: CTCAGGGACAGCACATGGGCACGGACGAGCTGGACG...TACGAGACCTACCAGCCATTTCAGAATTCCACAAGAAATTACGATGAGTCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCTTGACTATTGATGGGTaGCACAGCATCTGGATCCCT +
Preference number: 4 (lower is better)
Translates to: KKCLVVCMHMHCSRSACALTIDG*HSIWIP
Trigger: AGGGATCCAGATGCTGTGGCACCCATCAATAGTCAA...GGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACCCTGCAGCCAAGTTCTaGAGGGCGCCTGCCGCCCCT +
Preference number: 4 (lower is better)
Translates to: LLIFPYWLSQPSYGTGFNPAAKF*RAPAAP
Trigger: AGGGGCGGCAGGCGCCCTGCAGAACTTGGCTGCAGG...GTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AACAAAAGGCAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCACTTCCAGCTCCCTaGAGCCAAGTTCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: NKRQETSCCTEEPQCNLKPLPAP*SQVLQG
Trigger: GCCCTGCAGAACTTGGCTGCAGGGAGCTGGAAGTGG...CTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTGCCTTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
CDS-3UTR GCA 90 bp GAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCATCCGACATGGCCTTaGTTGCAGTGTTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: ERNVLWYACTCTVPGAPVHPTWP*LQCCCC
Trigger: ACAGCAACAACACTGCAAGCAAGGCCATGTCGGATG...CACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCCGACCAACTTCTCGATaGCACCGGCATCCCGTAAGG +
Preference number: 4 (lower is better)
Translates to: QNRKKCLVVCMHMHCSRSRPTSR*HRHPVR
Trigger: CCTTACGGGATGCCGGTGGCATCGAGAAGTTGGTCG...GCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTTAGGATCACTTTAGCTTTCCGACCAACTTCTCGATaGCACCGGCATCCCGTAAGG +
Preference number: 4 (lower is better)
Translates to: AHARKVLPTVIFRITLAFRPTSR*HRHPVR
Trigger: CCTTACGGGATGCCGGTGGCATCGAGAAGTTGGTCG...GAAAGCTAAAGTGATCCTAAATATGACAGTGGGCAGCACCTTTCTAGCGTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CCCACCGGCCCGAATGCCTCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGAGTGTTTATCTCCTTTaGTTTTGGAGATGCCGACCA +
Preference number: 4 (lower is better)
Translates to: PTGPNASSLLPSTTFSIKSVYLL*FWRCRP
Trigger: TGGTCGGCATCTCCAAAAGCAAAGGAGATAAACACT...CTTTATACTGAACGTGGTTGATGGGAGGAGAGACGAGGCATTCGGGCCGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGGTTGAGGACCTGAGATaGAGCCTTGACCACTTTTGG +
Preference number: 4 (lower is better)
Translates to: ERNVLWYACTCTVPGAPVVEDLR*SLDHFW
Trigger: CCAAAAGTGGTCAAGGCTGCATCTCAGGTCCTCAAC...CACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp ACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGGGTAGGTGGCGTTGCTaGCGGTGCACTCGTAGTCTG +
Preference number: 4 (lower is better)
Translates to: TKQKEMSCGMHAHALFPEGRWRC*RCTRSL
Trigger: CAGACTACGAGTGCACCGGCAGCAACGCCACCTACC...CTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AACAAAAGGCAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGCGTGGTAGGTGGCGTTaGTGCCGGTGCACTCGTAGT +
Preference number: 4 (lower is better)
Translates to: NKRQETSCCTEEPQCNLKRGRWR*CRCTRS
Trigger: ACTACGAGTGCACCGGCAGCAACGCCACCTACCACG...CTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTGCCTTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGTCTCGTAATCTTTTCTaGTGGGCTCCTGTGGGACTG +
Preference number: 4 (lower is better)
Translates to: ERNVLWYACTCTVPGAPVSRNLF*WAPVGL
Trigger: CAGTCCCACAGGAGCCCAGCAGAAAAGATTACGAGA...CACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCTGGTATGCATGCACATaGACTGTTCCCGGAGCGCCT +
Preference number: 4 (lower is better)
Translates to: KQKEMSCGMHAHALFPERWYACT*TVPGAP
Trigger: AGGCGCTCCGGGAACAGTGCATGTGCATGCATACCA...GCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp ATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTAAATGTCTTGTGGTATaGATGCACATGCACTGTTCC +
Preference number: 4 (lower is better)
Translates to: MSCGMHAHALFPERLCPAKCLVV*MHMHCS
Trigger: GGAACAGTGCATGTGCATGCATACCACAAGACATTT...AGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TCGTTGGCCTTCCCATACACCAGGTTTCTCAGAGCTCCACAGGCACTACGGTGGAAATGTCTTGTGGTATaGATGCACATGCACTGTTCC +
Preference number: 4 (lower is better)
Translates to: SLAFPYTRFLRAPQALRWKCLVV*MHMHCS
Trigger: GGAACAGTGCATGTGCATGCATACCACAAGACATTT...CCACCGTAGTGCCTGTGGAGCTCTGAGAAACCTGGTGTATGGGAAGGCCAACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR GCA 90 bp ACCGGCCCGAATGCCTCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGCACCTCACGCTAGAAAGGTaGTGCCCACTGTCATATTTA +
Preference number: 4 (lower is better)
Translates to: TGPNASSLLPSTTFSIKHLTLER*CPLSYL
Trigger: TAAATATGACAGTGGGCAGCACCTTTCTAGCGTGAG...GTGCTTTATACTGAACGTGGTTGATGGGAGGAGAGACGAGGCATTCGGGCCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp ACCGGCCCGAATGCCTCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGCACTCCATAGTTGTGTACTaGTCCCTGCCACATGAACAA +
Preference number: 4 (lower is better)
Translates to: TGPNASSLLPSTTFSIKHSIVVY*SLPHEQ
Trigger: TTGTTCATGTGGCAGGGAGCAGTACACAACTATGGA...GTGCTTTATACTGAACGTGGTTGATGGGAGGAGAGACGAGGCATTCGGGCCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304623.13
CDS-3UTR CCA 90 bp ACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCAGAGCCATCCCCGTTaGAGGTGTTTAAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: TKQKEMSCGMHAHALFPEQSHPR*RCLSRG
Trigger: GCCCCGGCTTAAACACCTCCAACGGGGATGGCTCTG...CTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTTAGGATCACTATCGCTCCAGCTGGCTaGCTACGATCTGCCGTTCAG +
Preference number: 4 (lower is better)
Translates to: YSTAHARKVLPTVIFRITIAPAG*LRSAVQ
Trigger: CTGAACGGCAGATCGTAGCCAGCCAGCTGGAGCGAT...AGTGATCCTAAATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCATCGCTCCAGCTGGCTaGCTACGATCTGCCGTTCAG +
Preference number: 4 (lower is better)
Translates to: QNRKKCLVVCMHMHCSRSIAPAG*LRSAVQ
Trigger: CTGAACGGCAGATCGTAGCCAGCCAGCTGGAGCGAT...GCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACATCGCTCCAGCTGGCTaGCTACGATCTGCCGTTCAG +
Preference number: 4 (lower is better)
Translates to: SSLLPSTTFSIKHFSLLYIAPAG*LRSAVQ
Trigger: CTGAACGGCAGATCGTAGCCAGCCAGCTGGAGCGAT...GTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTTGATGGGAGGAGAGACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCTAGAGTCACAACGGATGAAGGTTGCTATGGTAGCTaGCCGGATACTGGAAAGACC +
Preference number: 4 (lower is better)
Translates to: CCTEEPQCNLKPRVTTDEGCYGS*PDTGKT
Trigger: GGTCTTTCCAGTATCCGGCCAGCTACCATAGCAACC...TTCATCCGTTGTGACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CCA 90 bp ATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTCGGGCAGCGTGGAGCTaGAGTAGTAGAGCGCGGCGG +
Preference number: 4 (lower is better)
Translates to: IALNISLLVITAFLWNRLRAAWS*SSRARR
Trigger: CCGCCGCGCTCTACTACTCCAGCTCCACGCTGCCCG...AAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CCA 90 bp TACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATTTGCAGGGACCAGGCGCTTGGTaGGCGACAGGGTGGCGTACG +
Preference number: 4 (lower is better)
Translates to: YWLSQPSYGTGFNKLNLQGPGAW*ATGWRT
Trigger: CGTACGCCACCCTGTCGCCCACCAAGCGCCTGGTCC...CTGCAAATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CCA 90 bp CTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGAAGCCGTATCTATGTGGTGTTCTaGGGACTGCAGGGCCCGCAA +
Preference number: 4 (lower is better)
Translates to: LKPRVTTDEESKQSVRSRIYVVF*GLQGPQ
Trigger: TTGCGGGCCCTGCAGTCCCCAGAACACCACATAGAT...ACGGCTTCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGGACACCAGGGGAAGATaGGGCTGTGCTCGTGCGGTA +
Preference number: 4 (lower is better)
Translates to: NHVQYKALLVTLQLTLERDTRGR*GCARAV
Trigger: TACCGCACGAGCACAGCCCCATCTTCCCCTGGTGTC...CCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATTTGCAGGAGAAAGGCCGGCGGCATAGCTaGCCCTCTGGAAGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: LSQPSYGTGFNKLNLQEKGRRHS*PSGRWP
Trigger: CGGCCACCTTCCAGAGGGCCAGCTATGCCGCCGGCC...TTTCTCCTGCAAATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGACAATGGACGGGGACCTaGCCAAGGTGCCTTCAGGCG +
Preference number: 4 (lower is better)
Translates to: NKTERNVLWYACTCTVPGQWTGT*PRCLQA
Trigger: CGCCTGAAGGCACCTTGGCCAGGTCCCCGTCCATTG...TCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGGCTGCCGCGTTAGACTaGACCGAGGGAAACTGGTGC +
Preference number: 4 (lower is better)
Translates to: NHVQYKALLVTLQLTLERAAALD*TEGNWC
Trigger: GCACCAGTTTCCCTCGGTCCAGTCTAACGCGGCAGC...CCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp ACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGGCTGCCGCGTTAGACTaGACCGAGGGAAACTGGTGC +
Preference number: 4 (lower is better)
Translates to: TKQKEMSCGMHAHALFPEAAALD*TEGNWC
Trigger: GCACCAGTTTCCCTCGGTCCAGTCTAACGCGGCAGC...CTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCAGGTCCACCAGGAGCTaGATGCCTCCTTGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: KQKEMSCGMHAHALFPERRSTRS*MPPCLL
Trigger: AAGGAGACAAGGAGGCATCCAGCTCCTGGTGGACCT...GCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCGGCATCCTGGATGATTaGCATTTTGAGTGCATCGCA +
Preference number: 4 (lower is better)
Translates to: KKCLVVCMHMHCSRSACAGILDD*HFECIA
Trigger: TGCGATGCACTCAAAATGCCAATCATCCAGGATGCC...GGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTACTGCTAGGGCATCCTaGATGATTGGCATTTTGAGT +
Preference number: 4 (lower is better)
Translates to: EMSCGMHAHALFPERLCPTARAS*MIGILS
Trigger: ACTCAAAATGCCAATCATCCAGGATGCCCTAGCAGT...AGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCACTGCTAGGGCATCCTaGATGATTGGCATTTTGAGT +
Preference number: 4 (lower is better)
Translates to: RNVLWYACTCTVPGAPVPTARAS*MIGILS
Trigger: ACTCAAAATGCCAATCATCCAGGATGCCCTAGCAGT...GGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACCAGCATCCTTGCCATTaGCCTCGCCACAGAGTAGCC +
Preference number: 4 (lower is better)
Translates to: SSLLPSTTFSIKHFSLLYQHPCH*PRHRVA
Trigger: GGCTACTCTGTGGCGAGGCCAATGGCAAGGATGCTG...GTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTTGATGGGAGGAGAGACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGTGGTTCAGCACAGTCTaGAAGAGGTCCTACTCCATC +
Preference number: 4 (lower is better)
Translates to: ERNVLWYACTCTVPGAPVWFSTV*KRSYSI
Trigger: GATGGAGTAGGACCTCTTCCAGACTGTGCTGAACCA...CACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCTGGATCCCTTTTGGTaGTTCAGCACAGTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: KEMSCGMHAHALFPERLCLDPFW*FSTVWK
Trigger: CTTCCAGACTGTGCTGAACCACCAAAAGGGATCCAG...GCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGAAGCCGTCCCCCACACAGTCATCTGGATCCCTTTTaGTGGTTCAGCACAGTCTGG +
Preference number: 4 (lower is better)
Translates to: VTTDEESKQSVRSRPPHSHLDPF*WFSTVW
Trigger: CCAGACTGTGCTGAACCACCAAAAGGGATCCAGATG...ACTGTGTGGGGGACGGCTTCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCTGTGTCATCCGACATaGCCTTGCTTGCAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: ERNVLWYACTCTVPGAPVLCHPT*PCLQCC
Trigger: ACAACACTGCAAGCAAGGCCATGTCGGATGACACAG...CACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CTATTCTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCGACGAGGCTACAAAGTaGTATTGTGACCATCCATCC +
Preference number: 4 (lower is better)
Translates to: LFCVLCLTITLTPHRPECDEATK*YCDHPS
Trigger: GGATGGATGGTCACAATACCACTTTGTAGCCTCGTC...GCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAGAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CCTCCCATCAACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACAGCTCACGGCCGGTCCCTCTCGATaGTTGAAGACGAGGCTACAA +
Preference number: 4 (lower is better)
Translates to: PPINHVQYKALLVTLQLTAGPSR*LKTRLQ
Trigger: TTGTAGCCTCGTCTTCAACCATCGAGAGGGACCGGC...CGTGAGCTGTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTTGATGGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGGCTGTGCTGAAACCTaGTTGTGTTTGATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: EMSCGMHAHALFPERLCPGCAET*LCLMSS
Trigger: TGAAGACATCAAACACAACCAGGTTTCAGCACAGCC...AGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCCGTAATCTTTTCTGCTaGGCTCCTGTGGGACTGGCT +
Preference number: 4 (lower is better)
Translates to: NRKKCLVVCMHMHCSRSARNLFC*APVGLA
Trigger: AGCCAGTCCCACAGGAGCCCAGCAGAAAAGATTACG...GGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGGGCGATGGTGGACCTaGTCCTCGAAGAAGGACTCA +
Preference number: 4 (lower is better)
Translates to: QNRKKCLVVCMHMHCSRSGRWWT*SSKKDS
Trigger: TGAGTCCTTCTTCGAGGACCAGGTCCACCATCGCCC...GCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CACGGCGGCATTGGTGTAATATACACAACGCGCTTTTCTTCTTTAATCTGTAATCTGGCGGGAGGGCGATaGTGGACCTGGTCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: HGGIGVIYTTRFSSLICNLAGGR*WTWSSK
Trigger: CTTCGAGGACCAGGTCCACCATCGCCCTCCCGCCAG...ATTACAGATTAAAGAAGAAAAGCGCGTTGTGTATATTACACCAATGCCGCCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000513588.5
CDS-3UTR CCA 90 bp TGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCGAAAGAAATGTCTTGTaGTATGCATGCACATGCACT +
Preference number: 4 (lower is better)
Translates to: CLVVCMHMHCSRSACALLERNVL*YACTCT
Trigger: AGTGCATGTGCATGCATACCACAAGACATTTCTTTC...GAGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TCACACCCAGGAGTCGGGGGAGGCCGGGTAGTGGCTCGTTTCATAGTTCAGTTCGAAAGAAATGTCTTGTaGTATGCATGCACATGCACT +
Preference number: 4 (lower is better)
Translates to: SHPGVGGGRVVARFIVQFERNVL*YACTCT
Trigger: AGTGCATGTGCATGCATACCACAAGACATTTCTTTC...GAACTGAACTATGAAACGAGCCACTACCCGGCCTCCCCCGACTCCTGGGTGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GCACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTGTAGGGTCTGCACATaGAGGCAGAATGTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: ALLVTLQLTLERCCPLSYCRVCT*RQNVLL
Trigger: CAGGAGCACATTCTGCCTCCATGTGCAGACCCTACA...ATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513588.5
CDS-3UTR TCA 90 bp GAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTTCTTCGATATCTTTTTaGCCATCTTGTGACTGCCAC +
Preference number: 4 (lower is better)
Translates to: EMSCGMHAHALFPERLCPSSISF*PSCDCH
Trigger: GTGGCAGTCACAAGATGGTCAAAAAGATATCGAAGA...AGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp CAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCTAGAGTCTGGTGCTGCAACATCTaGATCACTTCCGGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: QETSCCTEEPQCNLKPRVWCCNI*ITSGSS
Trigger: GGAACTGCCGGAAGTGATTCAGATGTTGCAGCACCA...GACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp CTCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGCACTTCTCGTTACTCTAACTTCGGTCATCCGATaGTCCAACAGGTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: LVSPPINHVQYKALLVTLTSVIR*SNRSTR
Trigger: CCTGGTGGACCTGTTGGATCATCGGATGACCGAAGT...TAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTTGATGGGAGGAGAGACGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp CAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCCGAATTTTCCCAGCCTaGGTGGGGGATAATCACCGC +
Preference number: 4 (lower is better)
Translates to: QNRKKCLVVCMHMHCSRSRIFPA*VGDNHR
Trigger: GCGGTGATTATCCCCCACTCAGGCTGGGAAAATTCG...GCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp TGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCTACAAAGTGGTATTGTaGCCATCCATCCTTTTTGTA +
Preference number: 4 (lower is better)
Translates to: CLVVCMHMHCSRSACALLYKVVL*PSILFV
Trigger: TACAAAAAGGATGGATGGTCACAATACCACTTTGTA...GAGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp CCTCCCATCAACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACAGCTCACGGTCCCTCTCGATGGTTaGAGACGAGGCTACAAAGTG +
Preference number: 4 (lower is better)
Translates to: PPINHVQYKALLVTLQLTVPLDG*RRGYKV
Trigger: CACTTTGTAGCCTCGTCTTCAACCATCGAGAGGGAC...CGTGAGCTGTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTTGATGGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp AAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCAAACCTGGTTGTGTTTaGTGTCTTCAGCGGGCGCAC +
Preference number: 4 (lower is better)
Translates to: KQKEMSCGMHAHALFPERKPGCV*CLQRAH
Trigger: GTGCGCCCGCTGAAGACATCAAACACAACCAGGTTT...GCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp ACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGAGTTGCCGGTGGACTTaGGACCCAGGTGCATGGTGT +
Preference number: 4 (lower is better)
Translates to: TKQKEMSCGMHAHALFPESCRWT*DPGAWC
Trigger: ACACCATGCACCTGGGTCTCAAGTCCACCGGCAACT...CTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp CTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGAAGCCGTAGAGTAAACAAAGCGTaGGAAGCCGTCCCCCACACA +
Preference number: 4 (lower is better)
Translates to: LKPRVTTDEESKQSVRSRRVNKA*EAVPHT
Trigger: TGTGTGGGGGACGGCTTCTCACGCTTTGTTTACTCT...ACGGCTTCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp GTGTGTAAACTATTCTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGAACCCCAATGCAACCTaGAGCCTAGAGTCACAACGG +
Preference number: 4 (lower is better)
Translates to: VCKLFCVLCLTITLTPHRNPNAT*SLESQR
Trigger: CCGTTGTGACTCTAGGCTTCAGGTTGCATTGGGGTT...CCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAGAATAGTTTACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp AACAAAAGGCAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGGGCTCGGATATATACTaGCCACTGTGGCAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: NKRQETSCCTEEPQCNLKGSDIY*PLWQAG
Trigger: CCCTGCCTGCCACAGTGGTCAGTATATATCCGAGCC...CTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTGCCTTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513588.5
CDS-3UTR TCA 90 bp AGTCGGGGGAGGCCGGGTAGTGGCTCGTTTCATAGTTCAGTTCACTGTAGGGACGAAATTCCAGTGTTTTaGGCTAGAGTCCATGTAATG +
Preference number: 4 (lower is better)
Translates to: SRGRPGSGSFHSSVHCRDEIPVF*ARVHVM
Trigger: CATTACATGGACTCTAGCTCAAAACACTGGAATTTC...GTCCCTACAGTGAACTGAACTATGAAACGAGCCACTACCCGGCCTCCCCCGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513588.5
CDS-3UTR GCA 90 bp ACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGTGGCTGGCTACGATCTaGCGTTCAGCCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: TKQKEMSCGMHAHALFPEWLATI*RSASSS
Trigger: AGAGCTGGAGGCTGAACGGCAGATCGTAGCCAGCCA...CTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCCTTCTGCTGAACTCATaGTGCTCATGCTGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: NRKKCLVVCMHMHCSRSALLLNS*CSCCQS
Trigger: AGACTGGCAGCATGAGCAGCATGAGTTCAGCAGAAG...GGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GCCGTCCCCCACACAGTGTGTAAACTATTCTGTGTCTTGTGCTTAACGATAACCGGAATTGAGCTGAAGTaGACTCTGGGAGAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: AVPHTVCKLFCVLCLTITGIELK*TLGEQA
Trigger: AGCCTGCTCTCCCAGAGTGCACTTCAGCTCAATTCC...GGTTATCGTTAAGCACAAGACACAGAATAGTTTACACACTGTGTGGGGGACGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR GCA 90 bp AACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGGTGCCCATGCTGGCTaGTGTATGAGGCTCGGGAAC +
Preference number: 4 (lower is better)
Translates to: NKTERNVLWYACTCTVPGGAHAG*CMRLGN
Trigger: GTTCCCGAGCCTCATACAGCAGCCAGCATGGGCACC...TCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp ACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGAACTCTGGGCCCAGGTaGCCATGCTGGCTGCTGTAT +
Preference number: 4 (lower is better)
Translates to: TKQKEMSCGMHAHALFPENSGPR*PCWLLY
Trigger: ATACAGCAGCCAGCATGGGCACCTGGGCCCAGAGTT...CTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATGTGGGCCGTGCTGGCTaGCTGTGCGCTGCAAGGGGA +
Preference number: 4 (lower is better)
Translates to: FPYWLSQPSYGTGFNKLNVGRAG*LCAARG
Trigger: TCCCCTTGCAGCGCACAGGCAGCCAGCACGGCCCAC...ATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCGAGCAGGGCCGGATTTaGTGTATGGAGACTCAACAG +
Preference number: 4 (lower is better)
Translates to: KQKEMSCGMHAHALFPEREQGRI*CMETQQ
Trigger: CTGTTGAGTCTCCATACAGCAAATCCGGCCCTGCTC...GCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CCTCCCATCAACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACAGCTCACGGAGCAGGGCCGGATTTaGTGTATGGAGACTCAACAG +
Preference number: 4 (lower is better)
Translates to: PPINHVQYKALLVTLQLTEQGRI*CMETQQ
Trigger: CTGTTGAGTCTCCATACAGCAAATCCGGCCCTGCTC...CGTGAGCTGTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTTGATGGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp ATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTGGGACCTGGCCAAGGTaGCTTCAGGCGGGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: IALNISLLVITAFLWNRLGTWPR*LQAGEQ
Trigger: CTGCTCTCCCGCCTGAAGGCACCTTGGCCAGGTCCC...AAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTTAGGATCACTTTAGCTTTCCCAGGTCAGTCGTCTTaGGGAGTAACCTCACCAGTG +
Preference number: 4 (lower is better)
Translates to: AHARKVLPTVIFRITLAFPGQSS*GVTSPV
Trigger: CACTGGTGAGGTTACTCCGCAAGACGACTGACCTGG...GAAAGCTAAAGTGATCCTAAATATGACAGTGGGCAGCACCTTTCTAGCGTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACCCAGGTCAGTCGTCTTaGGGAGTAACCTCACCAGTG +
Preference number: 4 (lower is better)
Translates to: SSLLPSTTFSIKHFSLLYPGQSS*GVTSPV
Trigger: CACTGGTGAGGTTACTCCGCAAGACGACTGACCTGG...GTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTTGATGGGAGGAGAGACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCTGCTATCGATCTCACTaGTCCCCAGCGCAGACTGGA +
Preference number: 4 (lower is better)
Translates to: QNRKKCLVVCMHMHCSRSCYRSH*SPAQTG
Trigger: TCCAGTCTGCGCTGGGGAGCAGTGAGATCGATAGCA...GCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTTAGGATCACTTGCTATCGATCTCACTaGTCCCCAGCGCAGACTGGA +
Preference number: 4 (lower is better)
Translates to: YSTAHARKVLPTVIFRITCYRSH*SPAQTG
Trigger: TCCAGTCTGCGCTGGGGAGCAGTGAGATCGATAGCA...AGTGATCCTAAATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGATCCCTGAGACGTTTCTaGCGCCAGCCGGTACGAGAG +
Preference number: 4 (lower is better)
Translates to: NKTERNVLWYACTCTVPGSLRRF*RQPVRE
Trigger: CTCTCGTACCGGCTGGCGGCAGAAACGTCTCAGGGA...TCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGAAGCCGTCCCCCACACAGTTTGACTATTGATGGGTaGCACAGCATCTGGATCCCT +
Preference number: 4 (lower is better)
Translates to: VTTDEESKQSVRSRPPHSLTIDG*HSIWIP
Trigger: AGGGATCCAGATGCTGTGGCACCCATCAATAGTCAA...ACTGTGTGGGGGACGGCTTCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AAAATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGGTTCTGCAGGGCGCCTaGCGCCCCTTCCAGCGTGTC +
Preference number: 4 (lower is better)
Translates to: KIALNISLLVITAFLWNRVLQGA*RPFQRV
Trigger: GACACGCTGGAAGGGGCGGCAGGCGCCCTGCAGAAC...CCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCTTGGTAATCACTTCGTaGAGTGTGCAGCAGACAGCT +
Preference number: 4 (lower is better)
Translates to: KEMSCGMHAHALFPERLCLVITS*SVQQTA
Trigger: AGCTGTCTGCTGCACACTGCACGAAGTGATTACCAA...GCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGCGACCAACTTCTCGATaGCACCGGCATCCCGTAAGG +
Preference number: 4 (lower is better)
Translates to: NHVQYKALLVTLQLTLERRPTSR*HRHPVR
Trigger: CCTTACGGGATGCCGGTGGCATCGAGAAGTTGGTCG...CCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCTTTGCTTTTGGAGATaGCGACCAACTTCTCGATGC +
Preference number: 4 (lower is better)
Translates to: KEMSCGMHAHALFPERLCLCFWR*RPTSRC
Trigger: GCATCGAGAAGTTGGTCGGCATCTCCAAAAGCAAAG...GCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GATCCAACAGGTCCACCAGGAGCTGGATGCCTCCTTGTCTCCTTATCTCGGCTTAGTGTTTATCTCCTTTaGTTTTGGAGATGCCGACCA +
Preference number: 4 (lower is better)
Translates to: DPTGPPGAGCLLVSLSRLSVYLL*FWRCRP
Trigger: TGGTCGGCATCTCCAAAAGCAAAGGAGATAAACACT...AAGCCGAGATAAGGAGACAAGGAGGCATCCAGCTCCTGGTGGACCTGTTGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR GCA 90 bp TACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTTAGGATCACTTGGCGTTGCTGCCGGTaGACTCGTAGTCTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: YSTAHARKVLPTVIFRITWRCCR*TRSLFS
Trigger: GGAAAACAGACTACGAGTGCACCGGCAGCAACGCCA...AGTGATCCTAAATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTCTCGTAATCTTTTCTaGTGGGCTCCTGTGGGACTG +
Preference number: 4 (lower is better)
Translates to: NRKKCLVVCMHMHCSRSASRNLF*WAPVGL
Trigger: CAGTCCCACAGGAGCCCAGCAGAAAAGATTACGAGA...GGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GCACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTCTCGTAATCTTTTCTaGTGGGCTCCTGTGGGACTG +
Preference number: 4 (lower is better)
Translates to: ALLVTLQLTLERCCPLSYSRNLF*WAPVGL
Trigger: CAGTCCCACAGGAGCCCAGCAGAAAAGATTACGAGA...ATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTCACGCTAGAAAGGTaGTGCCCACTGTCATATTTA +
Preference number: 4 (lower is better)
Translates to: KKCLVVCMHMHCSRSACALTLER*CPLSYL
Trigger: TAAATATGACAGTGGGCAGCACCTTTCTAGCGTGAG...GGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCACAGAGGAACCCCAATaGAACCTGAAGCCTAGAGTC +
Preference number: 4 (lower is better)
Translates to: NRKKCLVVCMHMHCSRSATEEPQ*NLKPRV
Trigger: GACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGT...GGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CACGGCGGCATTGGTGTAATATACACAACGCGCTTTTCTTCTTTAATCTGTAATGCCCTTCCAGCTCCCTaGAGCCAAGTTCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: HGGIGVIYTTRFSSLICNALPAP*SQVLQG
Trigger: GCCCTGCAGAACTTGGCTGCAGGGAGCTGGAAGGGC...ATTACAGATTAAAGAAGAAAAGCGCGTTGTGTATATTACACCAATGCCGCCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513588.5
CDS-3UTR CCA 90 bp ATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTGGAGCTGTGAAGGGGTaGTTTCCCCCAGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: IALNISLLVITAFLWNRLGAVKG*FPPGPG
Trigger: CCCTGGCCCTGGGGGAAACCACCCCTTCACAGCTCC...AAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
CDS-3UTR CCA 90 bp GAGGAAACACGGCGGCATTGGTGTAATATACACAACGCGCTTTTCTTCTTTAATTCTGGAGGGTGGCCGTaGCATACAGCTCCTGCGAGT +
Preference number: 4 (lower is better)
Translates to: EETRRHWCNIHNALFFFNSGGWP*HTAPAS
Trigger: ACTCGCAGGAGCTGTATGCCACGGCCACCCTCCAGA...ATTAAAGAAGAAAAGCGCGTTGTGTATATTACACCAATGCCGCCGTGTTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304623.13
CDS-3UTR CCA 90 bp TTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATTTGCAGGAGAAACAGGGCCCGCAACTCTaGGCCCAGGTGCCCATGCTG +
Preference number: 4 (lower is better)
Translates to: LSQPSYGTGFNKLNLQEKQGPQL*AQVPML
Trigger: CAGCATGGGCACCTGGGCCCAGAGTTGCGGGCCCTG...TTTCTCCTGCAAATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATCGCGGCGGCATTCTGTaGGCCGTGCTGGCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: FPYWLSQPSYGTGFNKLNRGGIL*AVLAAC
Trigger: ACAGGCAGCCAGCACGGCCCACAGAATGCCGCCGCG...ATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCTCTGAATGCTATCAATaGACGGGGACCTGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: KQKEMSCGMHAHALFPERSECYQ*TGTWPR
Trigger: CCTTGGCCAGGTCCCCGTCCATTGATAGCATTCAGA...GCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCAGGTCCACCAGGAGCTaGATGCCTCCTTGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: QNRKKCLVVCMHMHCSRSRSTRS*MPPCLL
Trigger: AAGGAGACAAGGAGGCATCCAGCTCCTGGTGGACCT...GCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTTAGGATCACTTTAGCTTTCAGGTCCACCAGGAGCTaGATGCCTCCTTGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: AHARKVLPTVIFRITLAFRSTRS*MPPCLL
Trigger: AAGGAGACAAGGAGGCATCCAGCTCCTGGTGGACCT...GAAAGCTAAAGTGATCCTAAATATGACAGTGGGCAGCACCTTTCTAGCGTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GTGTGTAAACTATTCTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGTTTTCCCAGCCTGAGTaGGGGATAATCACCGCGTTG +
Preference number: 4 (lower is better)
Translates to: VCKLFCVLCLTITLTPHRFSQPE*GIITAL
Trigger: CAACGCGGTGATTATCCCCCACTCAGGCTGGGAAAA...CCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAGAATAGTTTACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCTAGAGTCACAACGGATGAATGGTTCAGCACAGTCTaGAAGAGGTCCTACTCCATC +
Preference number: 4 (lower is better)
Translates to: CCTEEPQCNLKPRVTTDEWFSTV*KRSYSI
Trigger: GATGGAGTAGGACCTCTTCCAGACTGTGCTGAACCA...TTCATCCGTTGTGACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GCACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATCTGGATCCCTTTTGGTaGTTCAGCACAGTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: ALLVTLQLTLERCCPLSYLDPFW*FSTVWK
Trigger: CTTCCAGACTGTGCTGAACCACCAAAAGGGATCCAG...ATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GCACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATCTGTGTCATCCGACATaGCCTTGCTTGCAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: ALLVTLQLTLERCCPLSYLCHPT*PCLQCC
Trigger: ACAACACTGCAAGCAAGGCCATGTCGGATGACACAG...ATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTTATCTCCTTTGCTTTTaGAGATGCCGACCAACTTCT +
Preference number: 4 (lower is better)
Translates to: EMSCGMHAHALFPERLCPYLLCF*RCRPTS
Trigger: AGAAGTTGGTCGGCATCTCCAAAAGCAAAGGAGATA...AGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGATTGCTGAGCGGTTGTTaGGAGACACGCGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: NKTERNVLWYACTCTVPGLLSGC*ETRAQG
Trigger: CCCCTGTGCGCGTGTCTCCCAACAACCGCTCAGCAA...TCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGTGGAATTCTGAAATaGCTGGTAGGTCTCGTAATC +
Preference number: 4 (lower is better)
Translates to: RNVLWYACTCTVPGAPVPCGILK*LVGLVI
Trigger: GATTACGAGACCTACCAGCCATTTCAGAATTCCACA...GGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCGAAAGAAATGTCTTGTaGTATGCATGCACATGCACT +
Preference number: 4 (lower is better)
Translates to: NVLWYACTCTVPGAPVPCERNVL*YACTCT
Trigger: AGTGCATGTGCATGCATACCACAAGACATTTCTTTC...GCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp GCCGTCCCCCACACAGTGTGTAAACTATTCTGTGTCTTGTGCTTAACGATAACCGTAATTCCTGTTCTTTaGCTGAGGCGAGGATGGCAG +
Preference number: 4 (lower is better)
Translates to: AVPHTVCKLFCVLCLTITVIPVL*LRRGWQ
Trigger: CTGCCATCCTCGCCTCAGTCAAAGAACAGGAATTAC...GGTTATCGTTAAGCACAAGACACAGAATAGTTTACACACTGTGTGGGGGACGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000513588.5
CDS-3UTR TCA 90 bp AACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCAAACTGCTCTTCTGCTaGACTCATGCTGCTCATGCT +
Preference number: 4 (lower is better)
Translates to: NRKKCLVVCMHMHCSRSAKLLFC*THAAHA
Trigger: AGCATGAGCAGCATGAGTTCAGCAGAAGAGCAGTTT...GGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp CAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCTAGAGTCCTTCAGGTTTGGAATTaGGCTGAAGTGCACTCTGGG +
Preference number: 4 (lower is better)
Translates to: QETSCCTEEPQCNLKPRVLQVWN*AEVHSG
Trigger: CCCAGAGTGCACTTCAGCTCAATTCCAAACCTGAAG...GACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR TCA 90 bp TTTTCTGTGGATACTTCAAGTAATTGGCCCCAAAGTGAAACTGAATTGGCCATGATGCTGGCTGCTGTATaGGGCTCGGGAACCAGCTGC +
Preference number: 4 (lower is better)
Translates to: FSVDTSSNWPQSETELAMMLAAV*GSGTSC
Trigger: GCAGCTGGTTCCCGAGCCTCATACAGCAGCCAGCAT...CATGGCCAATTCAGTTTCACTTTGGGGCCAATTACTTGAAGTATCCACAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304623.13
CDS-3UTR TCA 90 bp AACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTCTCTGGGATCTTTCTaGATGCTATCAATGGACGGG +
Preference number: 4 (lower is better)
Translates to: NRKKCLVVCMHMHCSRSASLGSF*MLSMDG
Trigger: CCCGTCCATTGATAGCATTCAGAAAGATCCCAGAGA...GGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp TCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACTGGTGCTGCAACATCTaGATCACTTCCGGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: SSLLPSTTFSIKHFSLLYWCCNI*ITSGSS
Trigger: GGAACTGCCGGAAGTGATTCAGATGTTGCAGCACCA...GTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTTGATGGGAGGAGAGACGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp AACAAAAGGCAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGACTTCGGTCATCCGATaGTCCAACAGGTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: NKRQETSCCTEEPQCNLKTSVIR*SNRSTR
Trigger: CCTGGTGGACCTGTTGGATCATCGGATGACCGAAGT...CTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTGCCTTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp AACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGATCCAAAGGACTCCTGTaGCCAGCTCCCGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: NKTERNVLWYACTCTVPGSKGLL*PAPGSP
Trigger: TGGAGATCCGGGAGCTGGTCACAGGAGTCCTTTGGA...TCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp AAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCATTTTCCGATCATCCTaGAGAGGCGAATTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: KEMSCGMHAHALFPERLCIFRSS*RGEFSQ
Trigger: CTGGGAAAATTCGCCTCTTCAGGATGATCGGAAAAT...GCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp CCTCCCATCAACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACAGCTCACGGTAGGGTTTGACTATTaGTGGGTGCCACAGCATCTG +
Preference number: 4 (lower is better)
Translates to: PPINHVQYKALLVTLQLTVGFDY*WVPQHL
Trigger: CAGATGCTGTGGCACCCATCAATAGTCAAACCCTAC...CGTGAGCTGTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTTGATGGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp GCCGTCCCCCACACAGTGTGTAAACTATTCTGTGTCTTGTGCTTAACGATAACCGTAGGGTTTGACTATTaGTGGGTGCCACAGCATCTG +
Preference number: 4 (lower is better)
Translates to: AVPHTVCKLFCVLCLTITVGFDY*WVPQHL
Trigger: CAGATGCTGTGGCACCCATCAATAGTCAAACCCTAC...GGTTATCGTTAAGCACAAGACACAGAATAGTTTACACACTGTGTGGGGGACGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp CAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCTAGAGTCGTAGGGTTTGACTATTaGTGGGTGCCACAGCATCTG +
Preference number: 4 (lower is better)
Translates to: QETSCCTEEPQCNLKPRVVGFDY*WVPQHL
Trigger: CAGATGCTGTGGCACCCATCAATAGTCAAACCCTAC...GACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp AACAAAAGGCAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGGGCTCGGATATATACTaGCCACTTCCAGCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: NKRQETSCCTEEPQCNLKGSDIY*PLPAPC
Trigger: GCAGGGAGCTGGAAGTGGTCAGTATATATCCGAGCC...CTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTGCCTTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
CDS-3UTR TCA 90 bp CAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCTAGAGTCCCTGAGATGCAGCCTTaGCCACTTTTGGAGAGTGTT +
Preference number: 4 (lower is better)
Translates to: QETSCCTEEPQCNLKPRVPEMQP*PLLESV
Trigger: AACACTCTCCAAAAGTGGTCAAGGCTGCATCTCAGG...GACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp CCCCAATGCAACCTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCCCTGAGATGCAGCCTTaGCCACTTTTGGAGAGTGTT +
Preference number: 4 (lower is better)
Translates to: PQCNLKPRVTTDEESKQSPEMQP*PLLESV
Trigger: AACACTCTCCAAAAGTGGTCAAGGCTGCATCTCAGG...GCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAGGTTGCATTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp TGCAACCTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGAAAACCTGGTTGTGTTTaGTGTCTTCAGCGGGCGCAC +
Preference number: 4 (lower is better)
Translates to: CNLKPRVTTDEESKQSVRKPGCV*CLQRAH
Trigger: GTGCGCCCGCTGAAGACATCAAACACAACCAGGTTT...TCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAGGTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp AAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCTGGGACTGGCTGTGCTaGAACCTGGTTGTGTTTGAT +
Preference number: 4 (lower is better)
Translates to: KQKEMSCGMHAHALFPERWDWLC*NLVVFD
Trigger: ATCAAACACAACCAGGTTTCAGCACAGCCAGTCCCA...GCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp CCTCCCATCAACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACAGCTCACGTGGGACTGGCTGTGCTaGAACCTGGTTGTGTTTGAT +
Preference number: 4 (lower is better)
Translates to: PPINHVQYKALLVTLQLTWDWLC*NLVVFD
Trigger: ATCAAACACAACCAGGTTTCAGCACAGCCAGTCCCA...CGTGAGCTGTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTTGATGGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp GAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGAAAAAGCACTTTGTTaGCAAGGAGTGTGGAATGAT +
Preference number: 4 (lower is better)
Translates to: EMSCGMHAHALFPERLCPEKALC*QGVWND
Trigger: ATCATTCCACACTCCTTGTCAACAAAGTGCTTTTTC...AGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304623.13
CDS-3UTR GCA 90 bp CCCCAATGCAACCTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCCTGACCTTGCCCAACTaGAGCATCTTCCGCTTTTGT +
Preference number: 4 (lower is better)
Translates to: PQCNLKPRVTTDEESKQSLTLPN*SIFRFC
Trigger: ACAAAAGCGGAAGATGCTGCAGTTGGGCAAGGTCAG...GCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAGGTTGCATTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000513588.5
CDS-3UTR GCA 90 bp AACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGTACAGCTCCTGCGAGTaGTTGCTGTACTGCTCGGAC +
Preference number: 4 (lower is better)
Translates to: NHVQYKALLVTLQLTLERYSSCE*LLYCSD
Trigger: GTCCGAGCAGTACAGCAAGCACTCGCAGGAGCTGTA...CCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR GCA 90 bp TACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATTTGCAGTGGTGTTCTGGGGACTaGAGGGCCCGCAACTCTGGG +
Preference number: 4 (lower is better)
Translates to: YWLSQPSYGTGFNKLNLQWCSGD*RARNSG
Trigger: CCCAGAGTTGCGGGCCCTGCAGTCCCCAGAACACCA...CTGCAAATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp ATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTGGCTGCCTGTGCGCTaGAAGGGGACGGAGTCGACA +
Preference number: 4 (lower is better)
Translates to: IALNISLLVITAFLWNRLWLPVR*KGTEST
Trigger: TGTCGACTCCGTCCCCTTGCAGCGCACAGGCAGCCA...AAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATTTGCAGTGGCTGCCTGTGCGCTaGAAGGGGACGGAGTCGACA +
Preference number: 4 (lower is better)
Translates to: YWLSQPSYGTGFNKLNLQWLPVR*KGTEST
Trigger: TGTCGACTCCGTCCCCTTGCAGCGCACAGGCAGCCA...CTGCAAATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TGCAACCTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGAGAGCAGGGCCGGATTTaGTGTATGGAGACTCAACAG +
Preference number: 4 (lower is better)
Translates to: CNLKPRVTTDEESKQSVREQGRI*CMETQQ
Trigger: CTGTTGAGTCTCCATACAGCAAATCCGGCCCTGCTC...TCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAGGTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATGGGACCTGGCCAAGGTaGCTTCAGGCGGGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: FPYWLSQPSYGTGFNKLNGTWPR*LQAGEQ
Trigger: CTGCTCTCCCGCCTGAAGGCACCTTGGCCAGGTCCC...ATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGGGATCTTTCTGAATaGTATCAATGGACGGGGACC +
Preference number: 4 (lower is better)
Translates to: NRKKCLVVCMHMHCSRSAWDLSE*YQWTGT
Trigger: GGTCCCCGTCCATTGATAGCATTCAGAAAGATCCCA...GGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GGACCTGGTCCTCGAAGAAGGACTCATCGTAATTTCTTGTGGAATTCTGAAATGGTGTTGCAAGTAGGCTaGCGCGTTAGACTGGACCGA +
Preference number: 4 (lower is better)
Translates to: GPGPRRRTHRNFLWNSEMVLQVG*RVRLDR
Trigger: TCGGTCCAGTCTAACGCGGCAGCCTACTTGCAACAC...CATTTCAGAATTCCACAAGAAATTACGATGAGTCCTTCTTCGAGGACCAGGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CTCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGCACTTCTCGTTACTCTATCACCAGTGCTGGGATaGCACCACAGTTTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: LVSPPINHVQYKALLVTLSPVLG*HHSFSG
Trigger: CCCTGAAAAACTGTGGTGGCATCCCAGCACTGGTGA...TAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTTGATGGGAGGAGAGACGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CTATTCTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCAGCACCTGTGATGAATaGAGCTGTATTTTCCGATCA +
Preference number: 4 (lower is better)
Translates to: LFCVLCLTITLTPHRPECSTCDE*SCIFRS
Trigger: TGATCGGAAAATACAGCTGCATTCATCACAGGTGCT...GCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAGAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AACAAAAGGCAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGTGCTATCGATCTCACTaGTCCCCAGCGCAGACTGGA +
Preference number: 4 (lower is better)
Translates to: NKRQETSCCTEEPQCNLKCYRSH*SPAQTG
Trigger: TCCAGTCTGCGCTGGGGAGCAGTGAGATCGATAGCA...CTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTGCCTTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGTGCTATCGATCTCACTaGTCCCCAGCGCAGACTGGA +
Preference number: 4 (lower is better)
Translates to: NHVQYKALLVTLQLTLERCYRSH*SPAQTG
Trigger: TCCAGTCTGCGCTGGGGAGCAGTGAGATCGATAGCA...CCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CACGGCGGCATTGGTGTAATATACACAACGCGCTTTTCTTCTTTAATCTGTAATTCCCTGAGACGTTTCTaGCGCCAGCCGGTACGAGAG +
Preference number: 4 (lower is better)
Translates to: HGGIGVIYTTRFSSLICNSLRRF*RQPVRE
Trigger: CTCTCGTACCGGCTGGCGGCAGAAACGTCTCAGGGA...ATTACAGATTAAAGAAGAAAAGCGCGTTGTGTATATTACACCAATGCCGCCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000513588.5
CDS-3UTR GCA 90 bp TGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCTAGAGTCACAACGGATGAATTGACTATTGATGGGTaGCACAGCATCTGGATCCCT +
Preference number: 4 (lower is better)
Translates to: CCTEEPQCNLKPRVTTDELTIDG*HSIWIP
Trigger: AGGGATCCAGATGCTGTGGCACCCATCAATAGTCAA...TTCATCCGTTGTGACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GCACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTTGACTATTGATGGGTaGCACAGCATCTGGATCCCT +
Preference number: 4 (lower is better)
Translates to: ALLVTLQLTLERCCPLSYLTIDG*HSIWIP
Trigger: AGGGATCCAGATGCTGTGGCACCCATCAATAGTCAA...ATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCTAGAGTCACAACGGATGAACGACATGGCCTTGCTTaGAGTGTTGTTGCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: CCTEEPQCNLKPRVTTDERHGLA*SVVAVV
Trigger: AACAACAGCAACAACACTGCAAGCAAGGCCATGTCG...TTCATCCGTTGTGACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCCTTTGCTTTTGGAGATaGCGACCAACTTCTCGATGC +
Preference number: 4 (lower is better)
Translates to: NRKKCLVVCMHMHCSRSALCFWR*RPTSRC
Trigger: GCATCGAGAAGTTGGTCGGCATCTCCAAAAGCAAAG...GGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCGTTGAGGACCTGAGATaGAGCCTTGACCACTTTTGG +
Preference number: 4 (lower is better)
Translates to: KQKEMSCGMHAHALFPERVEDLR*SLDHFW
Trigger: CCAAAAGTGGTCAAGGCTGCATCTCAGGTCCTCAAC...GCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTTAGGATCACTCTCAGATCTCGGTACTaGCACATGCTGTTGAGGACC +
Preference number: 4 (lower is better)
Translates to: YSTAHARKVLPTVIFRITLRSRY*HMLLRT
Trigger: GGTCCTCAACAGCATGTGGCAGTACCGAGATCTGAG...AGTGATCCTAAATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp ACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGTGGCGTTGCTGCCGGTaGACTCGTAGTCTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: TKQKEMSCGMHAHALFPEWRCCR*TRSLFS
Trigger: GGAAAACAGACTACGAGTGCACCGGCAGCAACGCCA...CTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGACGCTAGAAAGGTGCTaGCCACTGTCATATTTAGGA +
Preference number: 4 (lower is better)
Translates to: ERNVLWYACTCTVPGAPVTLERC*PLSYLG
Trigger: TCCTAAATATGACAGTGGGCAGCACCTTTCTAGCGT...CACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATTTGCAGGAGAAACCCCACCGGCCCGAATaGCTCGTCTCTCCTCCCATC +
Preference number: 4 (lower is better)
Translates to: LSQPSYGTGFNKLNLQEKPHRPE*LVSPPI
Trigger: GATGGGAGGAGAGACGAGGCATTCGGGCCGGTGGGG...TTTCTCCTGCAAATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCACAGAGGAACCCCAATaGAACCTGAAGCCTAGAGTC +
Preference number: 4 (lower is better)
Translates to: KQKEMSCGMHAHALFPERTEEPQ*NLKPRV
Trigger: GACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGT...GCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TGCAACCTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGAGAGGCTGATGAAGGCTaGTCTGGAACAGGCATAGCT +
Preference number: 4 (lower is better)
Translates to: CNLKPRVTTDEESKQSVREADEG*SGTGIA
Trigger: AGCTATGCCTGTTCCAGACCAGCCTTCATCAGCCTC...TCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAGGTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000513588.5
CDS-3UTR CCA 90 bp TCTAAAATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACACTTGGCCAGGCGGCTaGGCGACTGCTTGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: SKIALNISLLVITAFLWNTWPGG*ATAWAR
Trigger: CCTCGCCCAAGCAGTCGCCCAGCCGCCTGGCCAAGT...GTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTATTTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CCA 90 bp TTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATTTGCAGGAGAAATACTGCTCGGACGCGTaGACCAGGCGCTTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: LSQPSYGTGFNKLNLQEKYCSDA*TRRLVG
Trigger: GCCCACCAAGCGCCTGGTCCACGCGTCCGAGCAGTA...TTTCTCCTGCAAATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CCA 90 bp TACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTTAGGATCACTTCTGAATGCTATCAATaGACGGGGACCTGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: YSTAHARKVLPTVIFRITSECYQ*TGTWPR
Trigger: CCTTGGCCAGGTCCCCGTCCATTGATAGCATTCAGA...AGTGATCCTAAATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCTTTTGTTATCATCGTTaGCCTTCCCATACACCAGGT +
Preference number: 4 (lower is better)
Translates to: KKCLVVCMHMHCSRSACAFCYHR*PSHTPG
Trigger: ACCTGGTGTATGGGAAGGCCAACGATGATAACAAAA...GGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TTTATCTCCTTTGCTTTTGGAGATGCCGACCAACTTCTCGATGCCACCGGCATCGGCATCCTGGATGATTaGCATTTTGAGTGCATCGCA +
Preference number: 4 (lower is better)
Translates to: FISFAFGDADQLLDATGIGILDD*HFECIA
Trigger: TGCGATGCACTCAAAATGCCAATCATCCAGGATGCC...GATGCCGGTGGCATCGAGAAGTTGGTCGGCATCTCCAAAAGCAAAGGAGATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR CCA 90 bp GAAGGACTCATCGTAATTTCTTGTGGAATTCTGAAATGGCTGGTAGGTCTCGTACAGCATCCTTGCCATTaGCCTCGCCACAGAGTAGCC +
Preference number: 4 (lower is better)
Translates to: EGLIVISCGILKWLVGLVQHPCH*PRHRVA
Trigger: GGCTACTCTGTGGCGAGGCCAATGGCAAGGATGCTG...TACGAGACCTACCAGCCATTTCAGAATTCCACAAGAAATTACGATGAGTCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CCTCCCATCAACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACAGCTCACGTGGTTCAGCACAGTCTaGAAGAGGTCCTACTCCATC +
Preference number: 4 (lower is better)
Translates to: PPINHVQYKALLVTLQLTWFSTV*KRSYSI
Trigger: GATGGAGTAGGACCTCTTCCAGACTGTGCTGAACCA...CGTGAGCTGTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTTGATGGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CCCCAATGCAACCTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCTGGTTCAGCACAGTCTaGAAGAGGTCCTACTCCATC +
Preference number: 4 (lower is better)
Translates to: PQCNLKPRVTTDEESKQSWFSTV*KRSYSI
Trigger: GATGGAGTAGGACCTCTTCCAGACTGTGCTGAACCA...GCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAGGTTGCATTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CCTCCCATCAACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACAGCTCACGCTGGATCCCTTTTGGTaGTTCAGCACAGTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: PPINHVQYKALLVTLQLTLDPFW*FSTVWK
Trigger: CTTCCAGACTGTGCTGAACCACCAAAAGGGATCCAG...CGTGAGCTGTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTTGATGGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATTGTTCCGCAGCGCAGTaGCCACCGCGCACACCACAC +
Preference number: 4 (lower is better)
Translates to: FPYWLSQPSYGTGFNKLNCSAAQ*PPRTPH
Trigger: GTGTGGTGTGCGCGGTGGCCACTGCGCTGCGGAACA...ATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTTAGGATCACTTTAGCTTTCCATCCCGTAAGGCCTTaGCGTTCTCCATGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: AHARKVLPTVIFRITLAFHPVRP*RSPCSW
Trigger: CCAAGAACATGGAGAACGCCAAGGCCTTACGGGATG...GAAAGCTAAAGTGATCCTAAATATGACAGTGGGCAGCACCTTTCTAGCGTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CTCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACATCCCGTAAGGCCTTaGCGTTCTCCATGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: LVSPPINHVQYKALLVTLHPVRP*RSPCSW
Trigger: CCAAGAACATGGAGAACGCCAAGGCCTTACGGGATG...TAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTTGATGGGAGGAGAGACGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CTATTCTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCTATCTCCTTTGCTTTTaGAGATGCCGACCAACTTCT +
Preference number: 4 (lower is better)
Translates to: LFCVLCLTITLTPHRPECYLLCF*RCRPTS
Trigger: AGAAGTTGGTCGGCATCTCCAAAAGCAAAGGAGATA...GCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAGAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCAGCCTTGACCACTTTTaGAGAGTGTTTATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: RNVLWYACTCTVPGAPVPSLDHF*RVFISF
Trigger: AAAGGAGATAAACACTCTCCAAAAGTGGTCAAGGCT...GGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGAGCCTTGACCACTTTTaGAGAGTGTTTATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: KCLVVCMHMHCSRSACALSLDHF*RVFISF
Trigger: AAAGGAGATAAACACTCTCCAAAAGTGGTCAAGGCT...CAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCTGTGGAATTCTGAAATaGCTGGTAGGTCTCGTAATC +
Preference number: 4 (lower is better)
Translates to: KKCLVVCMHMHCSRSACACGILK*LVGLVI
Trigger: GATTACGAGACCTACCAGCCATTTCAGAATTCCACA...GGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACGCGGGAGGGCGATGGTaGACCTGGTCCTCGAAGAAG +
Preference number: 4 (lower is better)
Translates to: LLIFPYWLSQPSYGTGFNAGGRW*TWSSKK
Trigger: CTTCTTCGAGGACCAGGTCCACCATCGCCCTCCCGC...GTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCGAAAGAAATGTCTTGTaGTATGCATGCACATGCACT +
Preference number: 4 (lower is better)
Translates to: RNVLWYACTCTVPGAPVPERNVL*YACTCT
Trigger: AGTGCATGTGCATGCATACCACAAGACATTTCTTTC...GGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp AAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCAAACTGCTCTTCTGCTaGACTCATGCTGCTCATGCT +
Preference number: 4 (lower is better)
Translates to: KQKEMSCGMHAHALFPERKLLFC*THAAHA
Trigger: AGCATGAGCAGCATGAGTTCAGCAGAAGAGCAGTTT...GCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp GCCGTCCCCCACACAGTGTGTAAACTATTCTGTGTCTTGTGCTTAACGATAACCTCTTGTGACTGCCACTaGAACTGCTCTTCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: AVPHTVCKLFCVLCLTITSCDCH*NCSSAE
Trigger: TTCAGCAGAAGAGCAGTTTCAGTGGCAGTCACAAGA...GGTTATCGTTAAGCACAAGACACAGAATAGTTTACACACTGTGTGGGGGACGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp TGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCTAGAGTCACAACGGATGAACCTACTCCATCCCACTaGTCTTGGGATTTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: CCTEEPQCNLKPRVTTDEPTPSH*SWDFFF
Trigger: GAAAAAGAAATCCCAAGATCAGTGGGATGGAGTAGG...TTCATCCGTTGTGACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp AAGACGAGGCTACAAAGTGGTATTGTGACCATCCATCCTTTTTGTAGAGACTCCCAGCGTGTCTGGATTTaGGCACTCAGAGAGCAGTGT +
Preference number: 4 (lower is better)
Translates to: KTRLQSGIVTIHPFCRDSQRVWI*ALREQC
Trigger: ACACTGCTCTCTGAGTGCTCAAATCCAGACACGCTG...GGAGTCTCTACAAAAAGGATGGATGGTCACAATACCACTTTGTAGCCTCGTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR TCA 90 bp CAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCCCTGAGATGCAGCCTTaGCCACTTTTGGAGAGTGTT +
Preference number: 4 (lower is better)
Translates to: QNRKKCLVVCMHMHCSRSPEMQP*PLLESV
Trigger: AACACTCTCCAAAAGTGGTCAAGGCTGCATCTCAGG...GCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp AACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAACTGCCACATGCTGTTaGGGACCTGAGATGCAGCCT +
Preference number: 4 (lower is better)
Translates to: NKTERNVLWYACTCTVPGTATCC*GPEMQP
Trigger: AGGCTGCATCTCAGGTCCTCAACAGCATGTGGCAGT...TCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp AGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTACAAAGTGGTATTGTaGCCATCCATCCTTTTTGTA +
Preference number: 4 (lower is better)
Translates to: RNVLWYACTCTVPGAPVPYKVVL*PSILFV
Trigger: TACAAAAAGGATGGATGGTCACAATACCACTTTGTA...GGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp ACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGGTCCCTCTCGATGGTTaGAGACGAGGCTACAAAGTG +
Preference number: 4 (lower is better)
Translates to: TKQKEMSCGMHAHALFPEVPLDG*RRGYKV
Trigger: CACTTTGTAGCCTCGTCTTCAACCATCGAGAGGGAC...CTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp AACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGGTCCCTCTCGATGGTTaGAGACGAGGCTACAAAGTG +
Preference number: 4 (lower is better)
Translates to: NHVQYKALLVTLQLTLERVPLDG*RRGYKV
Trigger: CACTTTGTAGCCTCGTCTTCAACCATCGAGAGGGAC...CCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp AAGACGAGGCTACAAAGTGGTATTGTGACCATCCATCCTTTTTGTAGAGACTCCAAACCTGGTTGTGTTTaGTGTCTTCAGCGGGCGCAC +
Preference number: 4 (lower is better)
Translates to: KTRLQSGIVTIHPFCRDSKPGCV*CLQRAH
Trigger: GTGCGCCCGCTGAAGACATCAAACACAACCAGGTTT...GGAGTCTCTACAAAAAGGATGGATGGTCACAATACCACTTTGTAGCCTCGTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR TCA 90 bp ACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTTTGGGACTGGCTGTGCTaGAACCTGGTTGTGTTTGAT +
Preference number: 4 (lower is better)
Translates to: TSRYSTAHARKVLPTVIFWDWLC*NLVVFD
Trigger: ATCAAACACAACCAGGTTTCAGCACAGCCAGTCCCA...AAATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp GCACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATACTGGCCTAATATCCTaGGTCACTAGATGGTCAGAA +
Preference number: 4 (lower is better)
Translates to: ALLVTLQLTLERCCPLSYTGLIS*VTRWSE
Trigger: TTCTGACCATCTAGTGACTCAGGATATTAGGCCAGT...ATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304623.13
CDS-3UTR TCA 90 bp AGAGCAAAGCTAGTTTACCCGCGGCCCATGTTCTTTTCGATGGTTAGCCTTATTCTGCTCCCTGCCACATaGACAAAAAGTTTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: RAKLVYPRPMFFSMVSLILLPAT*TKSLGE
Trigger: TTCCCCCAAACTTTTTGTTCATGTGGCAGGGAGCAG...AATAAGGCTAACCATCGAAAAGAACATGGGCCGCGGGTAAACTAGCTTTGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000304623.13
CDS-3UTR GCA 90 bp AACAAAAGGCAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGAACTCATGCTGCTCATaGTGCCAGTCTCGGATCCGA +
Preference number: 4 (lower is better)
Translates to: NKRQETSCCTEEPQCNLKNSCCS*CQSRIR
Trigger: TCGGATCCGAGACTGGCAGCATGAGCAGCATGAGTT...CTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTGCCTTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGACTGCTGAACTCATGCTaGTCATGCTGCCAGTCTCGG +
Preference number: 4 (lower is better)
Translates to: NKTERNVLWYACTCTVPGLLNSC*SCCQSR
Trigger: CCGAGACTGGCAGCATGAGCAGCATGAGTTCAGCAG...TCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCCTTCTGCTGAACTCATaGTGCTCATGCTGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: QNRKKCLVVCMHMHCSRSLLLNS*CSCCQS
Trigger: AGACTGGCAGCATGAGCAGCATGAGTTCAGCAGAAG...GCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACACAGGGTGGCGTACGTaGCGATGGTGGAGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LLIFPYWLSQPSYGTGFNTGWRT*RWWSSA
Trigger: AGCTGAGCTCCACCATCGGCACGTACGCCACCCTGT...GTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR GCA 90 bp TACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATTTGCAGACAGGGTGGCGTACGTaGCGATGGTGGAGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: YWLSQPSYGTGFNKLNLQTGWRT*RWWSSA
Trigger: AGCTGAGCTCCACCATCGGCACGTACGCCACCCTGT...CTGCAAATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR GCA 90 bp ATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTGGTGCCCATGCTGGCTaGTGTATGAGGCTCGGGAAC +
Preference number: 4 (lower is better)
Translates to: IALNISLLVITAFLWNRLGAHAG*CMRLGN
Trigger: GTTCCCGAGCCTCATACAGCAGCCAGCATGGGCACC...AAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATTTGCAGGAGAAATGGTGTTCTGGGGACTaGAGGGCCCGCAACTCTGGG +
Preference number: 4 (lower is better)
Translates to: LSQPSYGTGFNKLNLQEKWCSGD*RARNSG
Trigger: CCCAGAGTTGCGGGCCCTGCAGTCCCCAGAACACCA...TTTCTCCTGCAAATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGACCAGGTCAGTCGTCTTaGGGAGTAACCTCACCAGTG +
Preference number: 4 (lower is better)
Translates to: NKTERNVLWYACTCTVPGPGQSS*GVTSPV
Trigger: CACTGGTGAGGTTACTCCGCAAGACGACTGACCTGG...TCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGAGCACCTGTGATGAATaGAGCTGTATTTTCCGATCA +
Preference number: 4 (lower is better)
Translates to: ERNVLWYACTCTVPGAPVSTCDE*SCIFRS
Trigger: TGATCGGAAAATACAGCTGCATTCATCACAGGTGCT...CACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp ATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTCCCTGAGACGTTTCTaGCGCCAGCCGGTACGAGAG +
Preference number: 4 (lower is better)
Translates to: IALNISLLVITAFLWNRLSLRRF*RQPVRE
Trigger: CTCTCGTACCGGCTGGCGGCAGAAACGTCTCAGGGA...AAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CTCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACATCCGACATGGCCTTaGTTGCAGTGTTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: LVSPPINHVQYKALLVTLHPTWP*LQCCCC
Trigger: ACAGCAACAACACTGCAAGCAAGGCCATGTCGGATG...TAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTTGATGGGAGGAGAGACGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCCATCCGACATGGCCTTaGTTGCAGTGTTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: QNRKKCLVVCMHMHCSRSHPTWP*LQCCCC
Trigger: ACAGCAACAACACTGCAAGCAAGGCCATGTCGGATG...GCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCTTGGTAATCACTTCGTaGAGTGTGCAGCAGACAGCT +
Preference number: 4 (lower is better)
Translates to: KQKEMSCGMHAHALFPERLVITS*SVQQTA
Trigger: AGCTGTCTGCTGCACACTGCACGAAGTGATTACCAA...GCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TTTTCTGTGGATACTTCAAGTAATTGGCCCCAAAGTGAAACTGAATTGGCCATGGACTTGAGACCCAGGTaGATGGTGTACTCGCTGGCG +
Preference number: 4 (lower is better)
Translates to: FSVDTSSNWPQSETELAMDLRPR*MVYSLA
Trigger: CGCCAGCGAGTACACCATGCACCTGGGTCTCAAGTC...CATGGCCAATTCAGTTTCACTTTGGGGCCAATTACTTGAAGTATCCACAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304623.13
CDS-3UTR GCA 90 bp AACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGATGGTATGCATGCACATaGACTGTTCCCGGAGCGCCT +
Preference number: 4 (lower is better)
Translates to: NKTERNVLWYACTCTVPGWYACT*TVPGAP
Trigger: AGGCGCTCCGGGAACAGTGCATGTGCATGCATACCA...TCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACGTCTTGTGGTATGCATaGACATGCACTGTTCCCGGA +
Preference number: 4 (lower is better)
Translates to: SSLLPSTTFSIKHFSLLYVLWYA*TCTVPG
Trigger: TCCGGGAACAGTGCATGTGCATGCATACCACAAGAC...GTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTTGATGGGAGGAGAGACGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CTCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGCACTTCTCGTTACTCTAGTCTTGTGGTATGCATaGACATGCACTGTTCCCGGA +
Preference number: 4 (lower is better)
Translates to: LVSPPINHVQYKALLVTLVLWYA*TCTVPG
Trigger: TCCGGGAACAGTGCATGTGCATGCATACCACAAGAC...TAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTTGATGGGAGGAGAGACGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCTAGAGTCACAACGGATGAACTCACGCTAGAAAGGTaGTGCCCACTGTCATATTTA +
Preference number: 4 (lower is better)
Translates to: CCTEEPQCNLKPRVTTDELTLER*CPLSYL
Trigger: TAAATATGACAGTGGGCAGCACCTTTCTAGCGTGAG...TTCATCCGTTGTGACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TCTAAAATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACCCCCACCGGCCCGAATaGCTCGTCTCTCCTCCCATC +
Preference number: 4 (lower is better)
Translates to: SKIALNISLLVITAFLWNPHRPE*LVSPPI
Trigger: GATGGGAGGAGAGACGAGGCATTCGGGCCGGTGGGG...GTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTATTTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GCACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATAGGCAAGAAACATCTTaGTGTACAGAGGAACCCCAA +
Preference number: 4 (lower is better)
Translates to: ALLVTLQLTLERCCPLSYRQETS*CTEEPQ
Trigger: TTGGGGTTCCTCTGTACAGCAAGATGTTTCTTGCCT...ATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCTAGAGTCACAACGGATGAAAGGCAAGAAACATCTTaGTGTACAGAGGAACCCCAA +
Preference number: 4 (lower is better)
Translates to: CCTEEPQCNLKPRVTTDERQETS*CTEEPQ
Trigger: TTGGGGTTCCTCTGTACAGCAAGATGTTTCTTGCCT...TTCATCCGTTGTGACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AACAAAAGGCAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGGAGGCTGATGAAGGCTaGTCTGGAACAGGCATAGCT +
Preference number: 4 (lower is better)
Translates to: NKRQETSCCTEEPQCNLKEADEG*SGTGIA
Trigger: AGCTATGCCTGTTCCAGACCAGCCTTCATCAGCCTC...CTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTGCCTTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000513588.5
CDS-3UTR CCA 90 bp TCCTATACAAAGTTGAAATTCCAGTGTTTTGAGCTGTCATGGCATCTTTCCTGGATCGCTCCAGCTGGCTaGCTACGATCTGCCGTTCAG +
Preference number: 4 (lower is better)
Translates to: SYTKLKFQCFELSWHLSWIAPAG*LRSAVQ
Trigger: CTGAACGGCAGATCGTAGCCAGCCAGCTGGAGCGAT...CCAGGAAAGATGCCATGACAGCTCAAAACACTGGAATTTCAACTTTGTATAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR CCA 90 bp TCTAAAATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACGGAGCTGTGAAGGGGTaGTTTCCCCCAGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SKIALNISLLVITAFLWNGAVKG*FPPGPG
Trigger: CCCTGGCCCTGGGGGAAACCACCCCTTCACAGCTCC...GTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTATTTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
CDS-3UTR CCA 90 bp GGCATTGGTGTAATATACACAACGCGCTTTTCTTCTTTAATCTGTAATGTACATCGGCTGGTCGTGCCCTaGCTGAAGCTCTGGCCCGTA +
Preference number: 4 (lower is better)
Translates to: GIGVIYTTRFSSLICNVHRLVVP*LKLWPV
Trigger: TACGGGCCAGAGCTTCAGCCAGGGCACGACCAGCCG...ATGTACATTACAGATTAAAGAAGAAAAGCGCGTTGTGTATATTACACCAATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CCA 90 bp CTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACCGTACGTGCCGATGGTaGAGCTCAGCTGGTGGATGG +
Preference number: 4 (lower is better)
Translates to: LLIFPYWLSQPSYGTGFNRTCRW*SSAGGW
Trigger: CCATCCACCAGCTGAGCTCCACCATCGGCACGTACG...GTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CCA 90 bp CCCCAATGCAACCTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCCGCGGTCTTCATAGATaGGATCTATGTGGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: PQCNLKPRVTTDEESKQSRGLHR*DLCGVL
Trigger: CAGAACACCACATAGATCCCATCTATGAAGACCGCG...GCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAGGTTGCATTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp ATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTGCTGCCGCGTTAGACTaGACCGAGGGAAACTGGTGC +
Preference number: 4 (lower is better)
Translates to: IALNISLLVITAFLWNRLAAALD*TEGNWC
Trigger: GCACCAGTTTCCCTCGGTCCAGTCTAACGCGGCAGC...AAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCTAGAGTCGGCATCCTGGATGATTaGCATTTTGAGTGCATCGCA +
Preference number: 4 (lower is better)
Translates to: QETSCCTEEPQCNLKPRVGILDD*HFECIA
Trigger: TGCGATGCACTCAAAATGCCAATCATCCAGGATGCC...GACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CAAAAGGCAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCGGCATCCTGGATGATTaGCATTTTGAGTGCATCGCA +
Preference number: 4 (lower is better)
Translates to: QKARNILLYRGTPMQPEAGILDD*HFECIA
Trigger: TGCGATGCACTCAAAATGCCAATCATCCAGGATGCC...GGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTGCCTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AACAAAAGGCAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGTTTTCCCAGCCTGAGTaGGGGATAATCACCGCGTTG +
Preference number: 4 (lower is better)
Translates to: NKRQETSCCTEEPQCNLKFSQPE*GIITAL
Trigger: CAACGCGGTGATTATCCCCCACTCAGGCTGGGAAAA...CTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTGCCTTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TGCAACCTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGACTGGATCCCTTTTGGTaGTTCAGCACAGTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: CNLKPRVTTDEESKQSVRLDPFW*FSTVWK
Trigger: CTTCCAGACTGTGCTGAACCACCAAAAGGGATCCAG...TCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAGGTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AGAGCAAAGCTAGTTTACCCGCGGCCCATGTTCTTTTCGATGGTTAGCCTTATTCATCTGGATCCCTTTTaGTGGTTCAGCACAGTCTGG +
Preference number: 4 (lower is better)
Translates to: RAKLVYPRPMFFSMVSLIHLDPF*WFSTVW
Trigger: CCAGACTGTGCTGAACCACCAAAAGGGATCCAGATG...AATAAGGCTAACCATCGAAAAGAACATGGGCCGCGGGTAAACTAGCTTTGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304623.13
CDS-3UTR CCA 90 bp GGCATTGGTGTAATATACACAACGCGCTTTTCTTCTTTAATCTGTAATGTACATTGTTCCGCAGCGCAGTaGCCACCGCGCACACCACAC +
Preference number: 4 (lower is better)
Translates to: GIGVIYTTRFSSLICNVHCSAAQ*PPRTPH
Trigger: GTGTGGTGTGCGCGGTGGCCACTGCGCTGCGGAACA...ATGTACATTACAGATTAAAGAAGAAAAGCGCGTTGTGTATATTACACCAATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GGCCTCAGCCACTTGCATCTAAAGAGCAAAGCTAGTTTACCCGCGGCCCATGTTAGCCTTGACCACTTTTaGAGAGTGTTTATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: GLSHLHLKSKASLPAAHVSLDHF*RVFISF
Trigger: AAAGGAGATAAACACTCTCCAAAAGTGGTCAAGGCT...AACATGGGCCGCGGGTAAACTAGCTTTGCTCTTTAGATGCAAGTGGCTGAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304623.13
CDS-3UTR CCA 90 bp GAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGTGTGGAATTCTGAAATaGCTGGTAGGTCTCGTAATC +
Preference number: 4 (lower is better)
Translates to: ERNVLWYACTCTVPGAPVCGILK*LVGLVI
Trigger: GATTACGAGACCTACCAGCCATTTCAGAATTCCACA...CACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCTAGAGTCGAAACACGGCGGCATTaGTGTAATATACACAACGCG +
Preference number: 4 (lower is better)
Translates to: QETSCCTEEPQCNLKPRVETRRH*CNIHNA
Trigger: CGCGTTGTGTATATTACACCAATGCCGCCGTGTTTC...GACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000513588.5
CDS-3UTR CCA 90 bp AAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCCATGTTCTTTTCGATaGTTAGCCTTATTTCTTAGC +
Preference number: 4 (lower is better)
Translates to: KCLVVCMHMHCSRSACALPCSFR*LALFLS
Trigger: GCTAAGAAATAAGGCTAACCATCGAAAAGAACATGG...CAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304623.13
CDS-3UTR CCA 90 bp TTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATGGAGCAGGCGGTTCCTaGCATCCTACCCACCTCCCT +
Preference number: 4 (lower is better)
Translates to: FPYWLSQPSYGTGFNKLNGAGGS*HPTHLP
Trigger: AGGGAGGTGGGTAGGATGCCAGGAACCGCCTGCTCC...ATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511377.5
CDS-3UTR TCA 90 bp AAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCTTTTTGACCATCTTGTaGCTGCCACTGAAACTGCTC +
Preference number: 4 (lower is better)
Translates to: KQKEMSCGMHAHALFPERFLTIL*LPLKLL
Trigger: GAGCAGTTTCAGTGGCAGTCACAAGATGGTCAAAAA...GCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp GCACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTCTTCGATATCTTTTTaGCCATCTTGTGACTGCCAC +
Preference number: 4 (lower is better)
Translates to: ALLVTLQLTLERCCPLSYSSISF*PSCDCH
Trigger: GTGGCAGTCACAAGATGGTCAAAAAGATATCGAAGA...ATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp GGACCTGGTCCTCGAAGAAGGACTCATCGTAATTTCTTGTGGAATTCTGAAATGCTTCAGGTTTGGAATTaGGCTGAAGTGCACTCTGGG +
Preference number: 4 (lower is better)
Translates to: GPGPRRRTHRNFLWNSEMLQVWN*AEVHSG
Trigger: CCCAGAGTGCACTTCAGCTCAATTCCAAACCTGAAG...CATTTCAGAATTCCACAAGAAATTACGATGAGTCCTTCTTCGAGGACCAGGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR TCA 90 bp CTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACAGGACACGACGATGTTaGTGGGCGAGCTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: LLIFPYWLSQPSYGTGFNRTRRC*WASWCC
Trigger: ACAGCACCAGCTCGCCCATCAACATCGTCGTGTCCT...GTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR TCA 90 bp CAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCTAGAGTCATTTTCCGATCATCCTaGAGAGGCGAATTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: QETSCCTEEPQCNLKPRVIFRSS*RGEFSQ
Trigger: CTGGGAAAATTCGCCTCTTCAGGATGATCGGAAAAT...GACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp ACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGGTAGGGTTTGACTATTaGTGGGTGCCACAGCATCTG +
Preference number: 4 (lower is better)
Translates to: TKQKEMSCGMHAHALFPEVGFDY*WVPQHL
Trigger: CAGATGCTGTGGCACCCATCAATAGTCAAACCCTAC...CTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp AAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCTACAAAGTGGTATTGTaGCCATCCATCCTTTTTGTA +
Preference number: 4 (lower is better)
Translates to: KKCLVVCMHMHCSRSACAYKVVL*PSILFV
Trigger: TACAAAAAGGATGGATGGTCACAATACCACTTTGTA...GGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp AACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAAACCCCAATGCAACCTaGAGCCTAGAGTCACAACGG +
Preference number: 4 (lower is better)
Translates to: NKTERNVLWYACTCTVPGNPNAT*SLESQR
Trigger: CCGTTGTGACTCTAGGCTTCAGGTTGCATTGGGGTT...TCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATTTGCAGGAGAAAGAGTGCTTGCTGTACTaGTCGGACGCGTGGACCAGG +
Preference number: 4 (lower is better)
Translates to: LSQPSYGTGFNKLNLQEKECLLY*SDAWTR
Trigger: CCTGGTCCACGCGTCCGAGCAGTACAGCAAGCACTC...TTTCTCCTGCAAATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR GCA 90 bp GGATGCCACCACAGTTTTTCAGGGCAATTTTGTTATCATCGTTGGCCTTCCCATTGGGATCTTTCTGAATaGTATCAATGGACGGGGACC +
Preference number: 4 (lower is better)
Translates to: GCHHSFSGQFCYHRWPSHWDLSE*YQWTGT
Trigger: GGTCCCCGTCCATTGATAGCATTCAGAAAGATCCCA...ATGGGAAGGCCAACGATGATAACAAAATTGCCCTGAAAAACTGTGGTGGCATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR GCA 90 bp CTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGAAGCCGTAGTTTTCAACGGTCTTaGTATCGATCTCACTGCTCC +
Preference number: 4 (lower is better)
Translates to: LKPRVTTDEESKQSVRSRSFQRS*YRSHCS
Trigger: GGAGCAGTGAGATCGATAGCAAGACCGTTGAAAACT...ACGGCTTCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp ACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTTCGACATGGCCTTGCTTaGAGTGTTGTTGCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: TSRYSTAHARKVLPTVIFRHGLA*SVVAVV
Trigger: AACAACAGCAACAACACTGCAAGCAAGGCCATGTCG...AAATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTTAGGATCACTTTAGCTTTCCGACATGGCCTTGCTTaGAGTGTTGTTGCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: AHARKVLPTVIFRITLAFRHGLA*SVVAVV
Trigger: AACAACAGCAACAACACTGCAAGCAAGGCCATGTCG...GAAAGCTAAAGTGATCCTAAATATGACAGTGGGCAGCACCTTTCTAGCGTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTTAGGATCACTTTAGCTTTCTTGGTAATCACTTCGTaGAGTGTGCAGCAGACAGCT +
Preference number: 4 (lower is better)
Translates to: AHARKVLPTVIFRITLAFLVITS*SVQQTA
Trigger: AGCTGTCTGCTGCACACTGCACGAAGTGATTACCAA...GAAAGCTAAAGTGATCCTAAATATGACAGTGGGCAGCACCTTTCTAGCGTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AAAATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGGGTAGGTGGCGTTGCTaGCGGTGCACTCGTAGTCTG +
Preference number: 4 (lower is better)
Translates to: KIALNISLLVITAFLWNRGRWRC*RCTRSL
Trigger: CAGACTACGAGTGCACCGGCAGCAACGCCACCTACC...CCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AAAATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCGTGGTAGGTGGCGTTaGTGCCGGTGCACTCGTAGT +
Preference number: 4 (lower is better)
Translates to: KIALNISLLVITAFLWNRRGRWR*CRCTRS
Trigger: ACTACGAGTGCACCGGCAGCAACGCCACCTACCACG...CCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AACAAAAGGCAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGTCTCGTAATCTTTTCTaGTGGGCTCCTGTGGGACTG +
Preference number: 4 (lower is better)
Translates to: NKRQETSCCTEEPQCNLKSRNLF*WAPVGL
Trigger: CAGTCCCACAGGAGCCCAGCAGAAAAGATTACGAGA...CTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTGCCTTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCAAATGTCTTGTGGTATaGATGCACATGCACTGTTCC +
Preference number: 4 (lower is better)
Translates to: NRKKCLVVCMHMHCSRSAKCLVV*MHMHCS
Trigger: GGAACAGTGCATGTGCATGCATACCACAAGACATTT...GGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCTAGAGTCACAACGGATGAAAAATGTCTTGTGGTATaGATGCACATGCACTGTTCC +
Preference number: 4 (lower is better)
Translates to: CCTEEPQCNLKPRVTTDEKCLVV*MHMHCS
Trigger: GGAACAGTGCATGTGCATGCATACCACAAGACATTT...TTCATCCGTTGTGACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATTTGCAGGAGAAACGTACGTGCCGATGGTaGAGCTCAGCTGGTGGATGG +
Preference number: 4 (lower is better)
Translates to: LSQPSYGTGFNKLNLQEKRTCRW*SSAGGW
Trigger: CCATCCACCAGCTGAGCTCCACCATCGGCACGTACG...TTTCTCCTGCAAATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CCA 90 bp TTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATTGGCGTACGTGCCGATaGTGGAGCTCAGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: FPYWLSQPSYGTGFNKLNWRTCR*WSSAGG
Trigger: TCCACCAGCTGAGCTCCACCATCGGCACGTACGCCA...ATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CCA 90 bp CACGGCGGCATTGGTGTAATATACACAACGCGCTTTTCTTCTTTAATCTGTAATATCTATGTGGTGTTCTaGGGACTGCAGGGCCCGCAA +
Preference number: 4 (lower is better)
Translates to: HGGIGVIYTTRFSSLICNIYVVF*GLQGPQ
Trigger: TTGCGGGCCCTGCAGTCCCCAGAACACCACATAGAT...ATTACAGATTAAAGAAGAAAAGCGCGTTGTGTATATTACACCAATGCCGCCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000513588.5
CDS-3UTR CCA 90 bp CAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGGCATCCTGGATGATTaGCATTTTGAGTGCATCGCA +
Preference number: 4 (lower is better)
Translates to: QNRKKCLVVCMHMHCSRSGILDD*HFECIA
Trigger: TGCGATGCACTCAAAATGCCAATCATCCAGGATGCC...GCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATTCCTTAGGCACCCGGTaGCGTTACGCAGCACCTGTG +
Preference number: 4 (lower is better)
Translates to: FPYWLSQPSYGTGFNKLNSLGTR*RYAAPV
Trigger: CACAGGTGCTGCGTAACGCCACCGGGTGCCTAAGGA...ATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GGACCTGGTCCTCGAAGAAGGACTCATCGTAATTTCTTGTGGAATTCTGAAATGCTGGATCCCTTTTGGTaGTTCAGCACAGTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: GPGPRRRTHRNFLWNSEMLDPFW*FSTVWK
Trigger: CTTCCAGACTGTGCTGAACCACCAAAAGGGATCCAG...CATTTCAGAATTCCACAAGAAATTACGATGAGTCCTTCTTCGAGGACCAGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CCA 90 bp ACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCATCTGGATCCCTTTTaGTGGTTCAGCACAGTCTGG +
Preference number: 4 (lower is better)
Translates to: TKQKEMSCGMHAHALFPEHLDPF*WFSTVW
Trigger: CCAGACTGTGCTGAACCACCAAAAGGGATCCAGATG...CTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp ACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCTGTGTCATCCGACATaGCCTTGCTTGCAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: TKQKEMSCGMHAHALFPELCHPT*PCLQCC
Trigger: ACAACACTGCAAGCAAGGCCATGTCGGATGACACAG...CTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TCTGTGGATACTTCAAGTAATTGGCCCCAAAGTGAAACTGAATTGGCCATGGTTCATCCCGTAAGGCCTTaGCGTTCTCCATGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: SVDTSSNWPQSETELAMVHPVRP*RSPCSW
Trigger: CCAAGAACATGGAGAACGCCAAGGCCTTACGGGATG...AACCATGGCCAATTCAGTTTCACTTTGGGGCCAATTACTTGAAGTATCCACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304623.13
CDS-3UTR CCA 90 bp GCACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTATCTCCTTTGCTTTTaGAGATGCCGACCAACTTCT +
Preference number: 4 (lower is better)
Translates to: ALLVTLQLTLERCCPLSYYLLCF*RCRPTS
Trigger: AGAAGTTGGTCGGCATCTCCAAAAGCAAAGGAGATA...ATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTTAGGATCACTGACGAGGCTACAAAGTaGTATTGTGACCATCCATCC +
Preference number: 4 (lower is better)
Translates to: YSTAHARKVLPTVIFRITDEATK*YCDHPS
Trigger: GGATGGATGGTCACAATACCACTTTGTAGCCTCGTC...AGTGATCCTAAATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGAAGCCGTGGCTGTGCTGAAACCTaGTTGTGTTTGATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: LKPRVTTDEESKQSVRSRGCAET*LCLMSS
Trigger: TGAAGACATCAAACACAACCAGGTTTCAGCACAGCC...ACGGCTTCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GCACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTGTGGAATTCTGAAATaGCTGGTAGGTCTCGTAATC +
Preference number: 4 (lower is better)
Translates to: ALLVTLQLTLERCCPLSYCGILK*LVGLVI
Trigger: GATTACGAGACCTACCAGCCATTTCAGAATTCCACA...ATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACGGGCGATGGTGGACCTaGTCCTCGAAGAAGGACTCA +
Preference number: 4 (lower is better)
Translates to: LLIFPYWLSQPSYGTGFNGRWWT*SSKKDS
Trigger: TGAGTCCTTCTTCGAGGACCAGGTCCACCATCGCCC...GTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp ATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTGGGCGATGGTGGACCTaGTCCTCGAAGAAGGACTCA +
Preference number: 4 (lower is better)
Translates to: IALNISLLVITAFLWNRLGRWWT*SSKKDS
Trigger: TGAGTCCTTCTTCGAGGACCAGGTCCACCATCGCCC...AAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TCTAAAATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACGCATGGTGTACTCGCTaGCGGGAGGGCGATGGTGGA +
Preference number: 4 (lower is better)
Translates to: SKIALNISLLVITAFLWNAWCTR*REGDGG
Trigger: TCCACCATCGCCCTCCCGCCAGCGAGTACACCATGC...GTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTATTTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGAAACACGGCGGCATTaGTGTAATATACACAACGCG +
Preference number: 4 (lower is better)
Translates to: QNRKKCLVVCMHMHCSRSETRRH*CNIHNA
Trigger: CGCGTTGTGTATATTACACCAATGCCGCCGTGTTTC...GCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000513588.5
3UTR CAA 72 bp AGTGCTGGGATGCCACCACAGTTTTTCAGGGCAATTTaGTTATCATCGTTGGCCTTCCCATACACCAGGTTT +
Preference number: 4 (lower is better)
Translates to: SAGMPPQFFRAI*LSSLAFPYTRF
Trigger: AAACCTGGTGTATGGGAAGGCCAACGATGATAACAAAATTGCCCTGAAAAACTGTGGTGGCATCCCAGCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR TCA 90 bp AAGACGAGGCTACAAAGTGGTATTGTGACCATCCATCCTTTTTGTAGAGACTCCTCTTGTGACTGCCACTaGAACTGCTCTTCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: KTRLQSGIVTIHPFCRDSSCDCH*NCSSAE
Trigger: TTCAGCAGAAGAGCAGTTTCAGTGGCAGTCACAAGA...GGAGTCTCTACAAAAAGGATGGATGGTCACAATACCACTTTGTAGCCTCGTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR TCA 90 bp TCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACTTTTTGACCATCTTGTaGCTGCCACTGAAACTGCTC +
Preference number: 4 (lower is better)
Translates to: SSLLPSTTFSIKHFSLLYFLTIL*LPLKLL
Trigger: GAGCAGTTTCAGTGGCAGTCACAAGATGGTCAAAAA...GTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTTGATGGGAGGAGAGACGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp ACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGTCTCTGGGATCTTTCTaGATGCTATCAATGGACGGG +
Preference number: 4 (lower is better)
Translates to: TKQKEMSCGMHAHALFPESLGSF*MLSMDG
Trigger: CCCGTCCATTGATAGCATTCAGAAAGATCCCAGAGA...CTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp TGCAACCTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGACCTACTCCATCCCACTaGTCTTGGGATTTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: CNLKPRVTTDEESKQSVRPTPSH*SWDFFF
Trigger: GAAAAAGAAATCCCAAGATCAGTGGGATGGAGTAGG...TCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAGGTTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp GCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTTAGGATCACTTTAGCTTTCCCTACTCCATCCCACTaGTCTTGGGATTTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: AHARKVLPTVIFRITLAFPTPSH*SWDFFF
Trigger: GAAAAAGAAATCCCAAGATCAGTGGGATGGAGTAGG...GAAAGCTAAAGTGATCCTAAATATGACAGTGGGCAGCACCTTTCTAGCGTGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp AACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGTAGGGTTTGACTATTaGTGGGTGCCACAGCATCTG +
Preference number: 4 (lower is better)
Translates to: NKTERNVLWYACTCTVPGVGFDY*WVPQHL
Trigger: CAGATGCTGTGGCACCCATCAATAGTCAAACCCTAC...TCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp GAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGTACAAAGTGGTATTGTaGCCATCCATCCTTTTTGTA +
Preference number: 4 (lower is better)
Translates to: ERNVLWYACTCTVPGAPVYKVVL*PSILFV
Trigger: TACAAAAAGGATGGATGGTCACAATACCACTTTGTA...CACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp GAGGAAACACGGCGGCATTGGTGTAATATACACAACGCGCTTTTCTTCTTTAATTGGGACTGGCTGTGCTaGAACCTGGTTGTGTTTGAT +
Preference number: 4 (lower is better)
Translates to: EETRRHWCNIHNALFFFNWDWLC*NLVVFD
Trigger: ATCAAACACAACCAGGTTTCAGCACAGCCAGTCCCA...ATTAAAGAAGAAAAGCGCGTTGTGTATATTACACCAATGCCGCCGTGTTTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000513588.5
CDS-3UTR TCA 90 bp CAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCACCTGTAGAGAGGGTTaGTATCCAAGTATGCGTGAA +
Preference number: 4 (lower is better)
Translates to: QNRKKCLVVCMHMHCSRSTCREG*YPSMRE
Trigger: TTCACGCATACTTGGATATCAACCCTCTCTACAGGT...GCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304623.13
CDS-3UTR GCA 90 bp AAAATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGTGGCTGGCTACGATCTaGCGTTCAGCCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: KIALNISLLVITAFLWNRWLATI*RSASSS
Trigger: AGAGCTGGAGGCTGAACGGCAGATCGTAGCCAGCCA...CCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATTTGCAGCTGCTGAACTCATGCTaGTCATGCTGCCAGTCTCGG +
Preference number: 4 (lower is better)
Translates to: YWLSQPSYGTGFNKLNLQLLNSC*SCCQSR
Trigger: CCGAGACTGGCAGCATGAGCAGCATGAGTTCAGCAG...CTGCAAATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GGCATTGGTGTAATATACACAACGCGCTTTTCTTCTTTAATCTGTAATGTACATGGGCCAGGGTCTGGTTaGTATGGTAGCTGGCCGGAT +
Preference number: 4 (lower is better)
Translates to: GIGVIYTTRFSSLICNVHGPGSG*YGSWPD
Trigger: ATCCGGCCAGCTACCATAGCAACCAGACCCTGGCCC...ATGTACATTACAGATTAAAGAAGAAAAGCGCGTTGTGTATATTACACCAATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR GCA 90 bp GAGGAAACACGGCGGCATTGGTGTAATATACACAACGCGCTTTTCTTCTTTAATCATCCGACATGGCCTTaGTTGCAGTGTTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: EETRRHWCNIHNALFFFNHPTWP*LQCCCC
Trigger: ACAGCAACAACACTGCAAGCAAGGCCATGTCGGATG...ATTAAAGAAGAAAAGCGCGTTGTGTATATTACACCAATGCCGCCGTGTTTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000513588.5
CDS-3UTR GCA 90 bp ACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGTTGGTAATCACTTCGTaGAGTGTGCAGCAGACAGCT +
Preference number: 4 (lower is better)
Translates to: TKQKEMSCGMHAHALFPELVITS*SVQQTA
Trigger: AGCTGTCTGCTGCACACTGCACGAAGTGATTACCAA...CTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AACAAAAGGCAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGTTGGTAATCACTTCGTaGAGTGTGCAGCAGACAGCT +
Preference number: 4 (lower is better)
Translates to: NKRQETSCCTEEPQCNLKLVITS*SVQQTA
Trigger: AGCTGTCTGCTGCACACTGCACGAAGTGATTACCAA...CTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTGCCTTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp ACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCTTTGCTTTTGGAGATaGCGACCAACTTCTCGATGC +
Preference number: 4 (lower is better)
Translates to: TKQKEMSCGMHAHALFPELCFWR*RPTSRC
Trigger: GCATCGAGAAGTTGGTCGGCATCTCCAAAAGCAAAG...CTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACTGGCGTTGCTGCCGGTaGACTCGTAGTCTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: LLIFPYWLSQPSYGTGFNWRCCR*TRSLFS
Trigger: GGAAAACAGACTACGAGTGCACCGGCAGCAACGCCA...GTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GGCATTGGTGTAATATACACAACGCGCTTTTCTTCTTTAATCTGTAATGTACATCGTGGTAGGTGGCGTTaGTGCCGGTGCACTCGTAGT +
Preference number: 4 (lower is better)
Translates to: GIGVIYTTRFSSLICNVHRGRWR*CRCTRS
Trigger: ACTACGAGTGCACCGGCAGCAACGCCACCTACCACG...ATGTACATTACAGATTAAAGAAGAAAAGCGCGTTGTGTATATTACACCAATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AAAATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGTTGCATCGCTCCAGCTaGCTGGCTACGATCTGCCGT +
Preference number: 4 (lower is better)
Translates to: KIALNISLLVITAFLWNRLHRSS*LATICR
Trigger: ACGGCAGATCGTAGCCAGCCAGCTGGAGCGATGCAA...CCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GGCATTGGTGTAATATACACAACGCGCTTTTCTTCTTTAATCTGTAATGTACATATGGTGGAGCTCAGCTaGTGGATGGGCGAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: GIGVIYTTRFSSLICNVHMVELS*WMGEEE
Trigger: CTCCTCCTCGCCCATCCACCAGCTGAGCTCCACCAT...ATGTACATTACAGATTAAAGAAGAAAAGCGCGTTGTGTATATTACACCAATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CCA 90 bp AAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCTCCATCCAAATTCTCTaGGATCTTTCTGAATGCTAT +
Preference number: 4 (lower is better)
Translates to: KEMSCGMHAHALFPERLCSIQIL*DLSECY
Trigger: ATAGCATTCAGAAAGATCCCAGAGAATTTGGATGGA...GCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCTTTTGTTATCATCGTTaGCCTTCCCATACACCAGGT +
Preference number: 4 (lower is better)
Translates to: KQKEMSCGMHAHALFPERFCYHR*PSHTPG
Trigger: ACCTGGTGTATGGGAAGGCCAACGATGATAACAAAA...GCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCTATCTCCTTTGCTTTTaGAGATGCCGACCAACTTCT +
Preference number: 4 (lower is better)
Translates to: KQKEMSCGMHAHALFPERYLLCF*RCRPTS
Trigger: AGAAGTTGGTCGGCATCTCCAAAAGCAAAGGAGATA...GCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCTGTTTTGAGCTGTCATaGCATCTTTCCTGGAAGTGT +
Preference number: 4 (lower is better)
Translates to: KQKEMSCGMHAHALFPERCFELS*HLSWKC
Trigger: ACACTTCCAGGAAAGATGCCATGACAGCTCAAAACA...GCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
CDS-3UTR CCA 90 bp CAAAAGGCAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCTGTTTTGAGCTGTCATaGCATCTTTCCTGGAAGTGT +
Preference number: 4 (lower is better)
Translates to: QKARNILLYRGTPMQPEACFELS*HLSWKC
Trigger: ACACTTCCAGGAAAGATGCCATGACAGCTCAAAACA...GGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTGCCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
CDS-3UTR CCA 90 bp CAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGGCTGTGCTGAAACCTaGTTGTGTTTGATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: QNRKKCLVVCMHMHCSRSGCAET*LCLMSS
Trigger: TGAAGACATCAAACACAACCAGGTTTCAGCACAGCC...GCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CCTCCCATCAACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACAGCTCACGCATGAACAAAAAGTTTaGGGGAATAAGGCGAGCAGT +
Preference number: 4 (lower is better)
Translates to: PPINHVQYKALLVTLQLTHEQKV*GNKASS
Trigger: ACTGCTCGCCTTATTCCCCCAAACTTTTTGTTCATG...CGTGAGCTGTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTTGATGGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304623.13
CDS-3UTR CCA 90 bp TCTAAAATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGCTGGCTGAAGCTCTaGCCCGTAGCTCGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: SKIALNISLLVITAFLWNSWLKL*PVARAC
Trigger: ACAAGCCCGAGCTACGGGCCAGAGCTTCAGCCAGCT...GTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTATTTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
3UTR CAA 72 bp GGACCTGGTCCTCGAAGAAGGACTCATCGTAATTTCTaGTGGAATTCTGAAATGGCTGGTAGGTCTCGTAAT +
Preference number: 4 (lower is better)
Translates to: GPGPRRRTHRNF*WNSEMAGRSRN
Trigger: ATTACGAGACCTACCAGCCATTTCAGAATTCCACAAGAAATTACGATGAGTCCTTCTTCGAGGACCAGGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR TCA 90 bp CACGGCGGCATTGGTGTAATATACACAACGCGCTTTTCTTCTTTAATCTGTAATGTAATTCCTGTTCTTTaGCTGAGGCGAGGATGGCAG +
Preference number: 4 (lower is better)
Translates to: HGGIGVIYTTRFSSLICNVIPVL*LRRGWQ
Trigger: CTGCCATCCTCGCCTCAGTCAAAGAACAGGAATTAC...ATTACAGATTAAAGAAGAAAAGCGCGTTGTGTATATTACACCAATGCCGCCGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000513588.5
CDS-3UTR TCA 90 bp AACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGATCTTGTGACTGCCACTaGAACTGCTCTTCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: NKTERNVLWYACTCTVPGSCDCH*NCSSAE
Trigger: TTCAGCAGAAGAGCAGTTTCAGTGGCAGTCACAAGA...TCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp GCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTTAGGATCACTTTAGCTTTCTCTTCGATATCTTTTTaGCCATCTTGTGACTGCCAC +
Preference number: 4 (lower is better)
Translates to: AHARKVLPTVIFRITLAFSSISF*PSCDCH
Trigger: GTGGCAGTCACAAGATGGTCAAAAAGATATCGAAGA...GAAAGCTAAAGTGATCCTAAATATGACAGTGGGCAGCACCTTTCTAGCGTGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp ACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGATTTTCCGATCATCCTaGAGAGGCGAATTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: TKQKEMSCGMHAHALFPEIFRSS*RGEFSQ
Trigger: CTGGGAAAATTCGCCTCTTCAGGATGATCGGAAAAT...CTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp TACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATTTGCAGGTAGGGACGGGCAGCTaGGTAGAAGTCAACGTAGTT +
Preference number: 4 (lower is better)
Translates to: YWLSQPSYGTGFNKLNLQVGTGS*VEVNVV
Trigger: AACTACGTTGACTTCTACTCAGCTGCCCGTCCCTAC...CTGCAAATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp CTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACAGAGTAAACAAAGCGTaGGAAGCCGTCCCCCACACA +
Preference number: 4 (lower is better)
Translates to: LLIFPYWLSQPSYGTGFNRVNKA*EAVPHT
Trigger: TGTGTGGGGGACGGCTTCTCACGCTTTGTTTACTCT...GTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp CTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACAACCCCAATGCAACCTaGAGCCTAGAGTCACAACGG +
Preference number: 4 (lower is better)
Translates to: LLIFPYWLSQPSYGTGFNNPNAT*SLESQR
Trigger: CCGTTGTGACTCTAGGCTTCAGGTTGCATTGGGGTT...GTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp CAAAAGGCAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCTGGTTTATCGTGTTCTaGGGGGATAAAATGTGTAAG +
Preference number: 4 (lower is better)
Translates to: QKARNILLYRGTPMQPEAWFIVF*GDKMCK
Trigger: CTTACACATTTTATCCCCTCAGAACACGATAAACCA...GGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTGCCTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000304623.13
CDS-3UTR GCA 90 bp AAAATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGTCATGCTGCTCATGCTaGCAGTCTCGGATCCGAGCT +
Preference number: 4 (lower is better)
Translates to: KIALNISLLVITAFLWNRSCCSC*QSRIRA
Trigger: AGCTCGGATCCGAGACTGGCAGCATGAGCAGCATGA...CCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATTTGCAGGAGAAATACAGCTCCTGCGAGTaGTTGCTGTACTGCTCGGAC +
Preference number: 4 (lower is better)
Translates to: LSQPSYGTGFNKLNLQEKYSSCE*LLYCSD
Trigger: GTCCGAGCAGTACAGCAAGCACTCGCAGGAGCTGTA...TTTCTCCTGCAAATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR GCA 90 bp ACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTTAGTGTTTATCTCCTTTaGTTTTGGAGATGCCGACCA +
Preference number: 4 (lower is better)
Translates to: TSRYSTAHARKVLPTVIFSVYLL*FWRCRP
Trigger: TGGTCGGCATCTCCAAAAGCAAAGGAGATAAACACT...AAATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCAGTGTTTATCTCCTTTaGTTTTGGAGATGCCGACCA +
Preference number: 4 (lower is better)
Translates to: QNRKKCLVVCMHMHCSRSSVYLL*FWRCRP
Trigger: TGGTCGGCATCTCCAAAAGCAAAGGAGATAAACACT...GCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CCCCAATGCAACCTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCCTATTCTGTGTCTTGTaGTTAACGATAACCCTTACG +
Preference number: 4 (lower is better)
Translates to: PQCNLKPRVTTDEESKQSLFCVL*LTITLT
Trigger: CGTAAGGGTTATCGTTAAGCACAAGACACAGAATAG...GCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAGGTTGCATTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCTAGAGTCCTATTCTGTGTCTTGTaGTTAACGATAACCCTTACG +
Preference number: 4 (lower is better)
Translates to: QETSCCTEEPQCNLKPRVLFCVL*LTITLT
Trigger: CGTAAGGGTTATCGTTAAGCACAAGACACAGAATAG...GACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCTAGAGTCACAACGGATGAATCCATCCAAATTCTCTaGGATCTTTCTGAATGCTAT +
Preference number: 4 (lower is better)
Translates to: CCTEEPQCNLKPRVTTDESIQIL*DLSECY
Trigger: ATAGCATTCAGAAAGATCCCAGAGAATTTGGATGGA...TTCATCCGTTGTGACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATAGGTCCACCAGGAGCTaGATGCCTCCTTGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: FPYWLSQPSYGTGFNKLNRSTRS*MPPCLL
Trigger: AAGGAGACAAGGAGGCATCCAGCTCCTGGTGGACCT...ATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp ACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGACTGCTAGGGCATCCTaGATGATTGGCATTTTGAGT +
Preference number: 4 (lower is better)
Translates to: TKQKEMSCGMHAHALFPETARAS*MIGILS
Trigger: ACTCAAAATGCCAATCATCCAGGATGCCCTAGCAGT...CTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TGCAACCTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGATATCTCCTTTGCTTTTaGAGATGCCGACCAACTTCT +
Preference number: 4 (lower is better)
Translates to: CNLKPRVTTDEESKQSVRYLLCF*RCRPTS
Trigger: AGAAGTTGGTCGGCATCTCCAAAAGCAAAGGAGATA...TCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAGGTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGACGAGGCTACAAAGTaGTATTGTGACCATCCATCC +
Preference number: 4 (lower is better)
Translates to: NKTERNVLWYACTCTVPGDEATK*YCDHPS
Trigger: GGATGGATGGTCACAATACCACTTTGTAGCCTCGTC...TCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTTAGGATCACTTGTTTTGAGCTGTCATaGCATCTTTCCTGGAAGTGT +
Preference number: 4 (lower is better)
Translates to: YSTAHARKVLPTVIFRITCFELS*HLSWKC
Trigger: ACACTTCCAGGAAAGATGCCATGACAGCTCAAAACA...AGTGATCCTAAATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
CDS-3UTR CCA 90 bp GTGTGTAAACTATTCTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGGAAAGAAATGTCTTGTaGTATGCATGCACATGCACT +
Preference number: 4 (lower is better)
Translates to: VCKLFCVLCLTITLTPHRERNVL*YACTCT
Trigger: AGTGCATGTGCATGCATACCACAAGACATTTCTTTC...CCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAGAATAGTTTACACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp TTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATTTGCAGGAGAAAGGTTTGGAATTGAGCTaGAGTGCACTCTGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LSQPSYGTGFNKLNLQEKGLELS*SALWES
Trigger: GCTCTCCCAGAGTGCACTTCAGCTCAATTCCAAACC...TTTCTCCTGCAAATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
CDS-3UTR TCA 90 bp AAAATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGGGTTTGGAATTGAGCTaGAGTGCACTCTGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: KIALNISLLVITAFLWNRGLELS*SALWES
Trigger: GCTCTCCCAGAGTGCACTTCAGCTCAATTCCAAACC...CCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
CDS-3UTR TCA 90 bp TTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATAAACCTGGTTGTGTTTaGTGTCTTCAGCGGGCGCAC +
Preference number: 4 (lower is better)
Translates to: FPYWLSQPSYGTGFNKLNKPGCV*CLQRAH
Trigger: GTGCGCCCGCTGAAGACATCAAACACAACCAGGTTT...ATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AAAATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGAACTCATGCTGCTCATaGTGCCAGTCTCGGATCCGA +
Preference number: 4 (lower is better)
Translates to: KIALNISLLVITAFLWNRNSCCS*CQSRIR
Trigger: TCGGATCCGAGACTGGCAGCATGAGCAGCATGAGTT...CCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AACAAAAGGCAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGAGCACCTGTGATGAATaGAGCTGTATTTTCCGATCA +
Preference number: 4 (lower is better)
Translates to: NKRQETSCCTEEPQCNLKSTCDE*SCIFRS
Trigger: TGATCGGAAAATACAGCTGCATTCATCACAGGTGCT...CTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTGCCTTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAAGTTTTCAACGGTCTTaGTATCGATCTCACTGCTCC +
Preference number: 4 (lower is better)
Translates to: NKTERNVLWYACTCTVPGSFQRS*YRSHCS
Trigger: GGAGCAGTGAGATCGATAGCAAGACCGTTGAAAACT...TCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp ATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTCATCCGACATGGCCTTaGTTGCAGTGTTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: IALNISLLVITAFLWNRLHPTWP*LQCCCC
Trigger: ACAGCAACAACACTGCAAGCAAGGCCATGTCGGATG...AAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp ACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGAGTGTTTATCTCCTTTaGTTTTGGAGATGCCGACCA +
Preference number: 4 (lower is better)
Translates to: TKQKEMSCGMHAHALFPESVYLL*FWRCRP
Trigger: TGGTCGGCATCTCCAAAAGCAAAGGAGATAAACACT...CTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATTTGCAGTCTCGTAATCTTTTCTaGTGGGCTCCTGTGGGACTG +
Preference number: 4 (lower is better)
Translates to: YWLSQPSYGTGFNKLNLQSRNLF*WAPVGL
Trigger: CAGTCCCACAGGAGCCCAGCAGAAAAGATTACGAGA...CTGCAAATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGAAATGTCTTGTGGTATaGATGCACATGCACTGTTCC +
Preference number: 4 (lower is better)
Translates to: NHVQYKALLVTLQLTLERKCLVV*MHMHCS
Trigger: GGAACAGTGCATGTGCATGCATACCACAAGACATTT...CCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAACGCTAGAAAGGTGCTaGCCACTGTCATATTTAGGA +
Preference number: 4 (lower is better)
Translates to: NKTERNVLWYACTCTVPGTLERC*PLSYLG
Trigger: TCCTAAATATGACAGTGGGCAGCACCTTTCTAGCGT...TCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GAGGAAACACGGCGGCATTGGTGTAATATACACAACGCGCTTTTCTTCTTTAATACGCTAGAAAGGTGCTaGCCACTGTCATATTTAGGA +
Preference number: 4 (lower is better)
Translates to: EETRRHWCNIHNALFFFNTLERC*PLSYLG
Trigger: TCCTAAATATGACAGTGGGCAGCACCTTTCTAGCGT...ATTAAAGAAGAAAAGCGCGTTGTGTATATTACACCAATGCCGCCGTGTTTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000513588.5
CDS-3UTR CCA 90 bp ATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTCGAGGATGGCAGAGGTaGTTTCTGTTTCAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: IALNISLLVITAFLWNRLRGWQR*FLFQSH
Trigger: ATGGCTCTGAAACAGAAACCACCTCTGCCATCCTCG...AAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AAAATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGGGTTGCTATGGTAGCTaGCCGGATACTGGAAAGACC +
Preference number: 4 (lower is better)
Translates to: KIALNISLLVITAFLWNRGCYGS*PDTGKT
Trigger: GGTCTTTCCAGTATCCGGCCAGCTACCATAGCAACC...CCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
CDS-3UTR CCA 90 bp AAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCTCCATCCAAATTCTCTaGGATCTTTCTGAATGCTAT +
Preference number: 4 (lower is better)
Translates to: KQKEMSCGMHAHALFPERSIQIL*DLSECY
Trigger: ATAGCATTCAGAAAGATCCCAGAGAATTTGGATGGA...GCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATTTGCAGGAGAAATTTTCCCAGCCTGAGTaGGGGATAATCACCGCGTTG +
Preference number: 4 (lower is better)
Translates to: LSQPSYGTGFNKLNLQEKFSQPE*GIITAL
Trigger: CAACGCGGTGATTATCCCCCACTCAGGCTGGGAAAA...TTTCTCCTGCAAATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AAAATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCATCCCGTAAGGCCTTaGCGTTCTCCATGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: KIALNISLLVITAFLWNRHPVRP*RSPCSW
Trigger: CCAAGAACATGGAGAACGCCAAGGCCTTACGGGATG...CCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AACAAAAGGCAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGTGTTTTGAGCTGTCATaGCATCTTTCCTGGAAGTGT +
Preference number: 4 (lower is better)
Translates to: NKRQETSCCTEEPQCNLKCFELS*HLSWKC
Trigger: ACACTTCCAGGAAAGATGCCATGACAGCTCAAAACA...CTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTGCCTTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
CDS-3UTR CCA 90 bp AAGACGAGGCTACAAAGTGGTATTGTGACCATCCATCCTTTTTGTAGAGACTCCTGTTTTGAGCTGTCATaGCATCTTTCCTGGAAGTGT +
Preference number: 4 (lower is better)
Translates to: KTRLQSGIVTIHPFCRDSCFELS*HLSWKC
Trigger: ACACTTCCAGGAAAGATGCCATGACAGCTCAAAACA...GGAGTCTCTACAAAAAGGATGGATGGTCACAATACCACTTTGTAGCCTCGTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR CCA 90 bp AAAATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCGTAATCTTTTCTGCTaGGCTCCTGTGGGACTGGCT +
Preference number: 4 (lower is better)
Translates to: KIALNISLLVITAFLWNRRNLFC*APVGLA
Trigger: AGCCAGTCCCACAGGAGCCCAGCAGAAAAGATTACG...CCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAAATGTGCTCCTGTCATaGCATCTTTCCTGGAAGTGT +
Preference number: 4 (lower is better)
Translates to: NKTERNVLWYACTCTVPGNVLLS*HLSWKC
Trigger: ACACTTCCAGGAAAGATGCCATGACAGGAGCACATT...TCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513588.5
3UTR CAA 72 bp CTTCAGCGGGCGCACCATAAGAATTCCTATACAAAGTaGAAATTCCAGTGTTTTGAGCTGTCATGGCATCTT +
Preference number: 4 (lower is better)
Translates to: LQRAHHKNSYTK*KFQCFELSWHL
Trigger: AAGATGCCATGACAGCTCAAAACACTGGAATTTCAACTTTGTATAGGAATTCTTATGGTGCGCCCGCTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR TCA 90 bp AAAATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCCTGAGATGCAGCCTTaGCCACTTTTGGAGAGTGTT +
Preference number: 4 (lower is better)
Translates to: KIALNISLLVITAFLWNRPEMQP*PLLESV
Trigger: AACACTCTCCAAAAGTGGTCAAGGCTGCATCTCAGG...CCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp CAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCTACAAAGTGGTATTGTaGCCATCCATCCTTTTTGTA +
Preference number: 4 (lower is better)
Translates to: QNRKKCLVVCMHMHCSRSYKVVL*PSILFV
Trigger: TACAAAAAGGATGGATGGTCACAATACCACTTTGTA...GCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp CTCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGCACTTCTCGTTACTCTATACAAAGTGGTATTGTaGCCATCCATCCTTTTTGTA +
Preference number: 4 (lower is better)
Translates to: LVSPPINHVQYKALLVTLYKVVL*PSILFV
Trigger: TACAAAAAGGATGGATGGTCACAATACCACTTTGTA...TAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTTGATGGGAGGAGAGACGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GAAGGACTCATCGTAATTTCTTGTGGAATTCTGAAATGGCTGGTAGGTCTCGTAAGCACCTGTGATGAATaGAGCTGTATTTTCCGATCA +
Preference number: 4 (lower is better)
Translates to: EGLIVISCGILKWLVGLVSTCDE*SCIFRS
Trigger: TGATCGGAAAATACAGCTGCATTCATCACAGGTGCT...TACGAGACCTACCAGCCATTTCAGAATTCCACAAGAAATTACGATGAGTCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATTTGCAGCTTTGCTTTTGGAGATaGCGACCAACTTCTCGATGC +
Preference number: 4 (lower is better)
Translates to: YWLSQPSYGTGFNKLNLQLCFWR*RPTSRC
Trigger: GCATCGAGAAGTTGGTCGGCATCTCCAAAAGCAAAG...CTGCAAATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACCTTTGCTTTTGGAGATaGCGACCAACTTCTCGATGC +
Preference number: 4 (lower is better)
Translates to: LLIFPYWLSQPSYGTGFNLCFWR*RPTSRC
Trigger: GCATCGAGAAGTTGGTCGGCATCTCCAAAAGCAAAG...GTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp ATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTCGCGGTCTTCATAGATaGGATCTATGTGGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: IALNISLLVITAFLWNRLRGLHR*DLCGVL
Trigger: CAGAACACCACATAGATCCCATCTATGAAGACCGCG...AAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GGCATTGGTGTAATATACACAACGCGCTTTTCTTCTTTAATCTGTAATGTACATTCTGAATGCTATCAATaGACGGGGACCTGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: GIGVIYTTRFSSLICNVHSECYQ*TGTWPR
Trigger: CCTTGGCCAGGTCCCCGTCCATTGATAGCATTCAGA...ATGTACATTACAGATTAAAGAAGAAAAGCGCGTTGTGTATATTACACCAATGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GAGGAAACACGGCGGCATTGGTGTAATATACACAACGCGCTTTTCTTCTTTAATTTTTGTTATCATCGTTaGCCTTCCCATACACCAGGT +
Preference number: 4 (lower is better)
Translates to: EETRRHWCNIHNALFFFNFCYHR*PSHTPG
Trigger: ACCTGGTGTATGGGAAGGCCAACGATGATAACAAAA...ATTAAAGAAGAAAAGCGCGTTGTGTATATTACACCAATGCCGCCGTGTTTCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000513588.5
CDS-3UTR CCA 90 bp AACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGATTTTGTTATCATCGTTaGCCTTCCCATACACCAGGT +
Preference number: 4 (lower is better)
Translates to: NKTERNVLWYACTCTVPGFCYHR*PSHTPG
Trigger: ACCTGGTGTATGGGAAGGCCAACGATGATAACAAAA...TCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGAGCCTTGACCACTTTTaGAGAGTGTTTATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: NHVQYKALLVTLQLTLERSLDHF*RVFISF
Trigger: AAAGGAGATAAACACTCTCCAAAAGTGGTCAAGGCT...CCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATTTGCAGGACGAGGCTACAAAGTaGTATTGTGACCATCCATCC +
Preference number: 4 (lower is better)
Translates to: YWLSQPSYGTGFNKLNLQDEATK*YCDHPS
Trigger: GGATGGATGGTCACAATACCACTTTGTAGCCTCGTC...CTGCAAATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TCTAAAATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACCGTAATCTTTTCTGCTaGGCTCCTGTGGGACTGGCT +
Preference number: 4 (lower is better)
Translates to: SKIALNISLLVITAFLWNRNLFC*APVGLA
Trigger: AGCCAGTCCCACAGGAGCCCAGCAGAAAAGATTACG...GTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTATTTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp ACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTTAAAGTGAAACTGAATTaGCCATGGTTTATCGTGTTC +
Preference number: 4 (lower is better)
Translates to: TSRYSTAHARKVLPTVIFKVKLN*PWFIVF
Trigger: GAACACGATAAACCATGGCCAATTCAGTTTCACTTT...AAATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304623.13
CDS-3UTR TCA 90 bp TTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATTTGCAGGAGAAAAAACTGCTCTTCTGCTaGACTCATGCTGCTCATGCT +
Preference number: 4 (lower is better)
Translates to: LSQPSYGTGFNKLNLQEKKLLFC*THAAHA
Trigger: AGCATGAGCAGCATGAGTTCAGCAGAAGAGCAGTTT...TTTCTCCTGCAAATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp AAAATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGTCTTGTGACTGCCACTaGAACTGCTCTTCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: KIALNISLLVITAFLWNRSCDCH*NCSSAE
Trigger: TTCAGCAGAAGAGCAGTTTCAGTGGCAGTCACAAGA...CCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp AAAATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGTCTCTGGGATCTTTCTaGATGCTATCAATGGACGGG +
Preference number: 4 (lower is better)
Translates to: KIALNISLLVITAFLWNRSLGSF*MLSMDG
Trigger: CCCGTCCATTGATAGCATTCAGAAAGATCCCAGAGA...CCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATTTGCAGGAGAAATGGGATCTTTCTGAATaGTATCAATGGACGGGGACC +
Preference number: 4 (lower is better)
Translates to: LSQPSYGTGFNKLNLQEKWDLSE*YQWTGT
Trigger: GGTCCCCGTCCATTGATAGCATTCAGAAAGATCCCA...TTTCTCCTGCAAATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp GGCATTGGTGTAATATACACAACGCGCTTTTCTTCTTTAATCTGTAATGTACATGTTGAGGACCTGAGATaGAGCCTTGACCACTTTTGG +
Preference number: 4 (lower is better)
Translates to: GIGVIYTTRFSSLICNVHVEDLR*SLDHFW
Trigger: CCAAAAGTGGTCAAGGCTGCATCTCAGGTCCTCAAC...ATGTACATTACAGATTAAAGAAGAAAAGCGCGTTGTGTATATTACACCAATGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGACTATTCTGTGTCTTGTaGTTAACGATAACCCTTACG +
Preference number: 4 (lower is better)
Translates to: NKTERNVLWYACTCTVPGLFCVL*LTITLT
Trigger: CGTAAGGGTTATCGTTAAGCACAAGACACAGAATAG...TCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp CTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACAGGCAAGAAACATCTTaGTGTACAGAGGAACCCCAA +
Preference number: 4 (lower is better)
Translates to: LLIFPYWLSQPSYGTGFNRQETS*CTEEPQ
Trigger: TTGGGGTTCCTCTGTACAGCAAGATGTTTCTTGCCT...GTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp TCTAAAATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACCATCTGGATCCCTTTTaGTGGTTCAGCACAGTCTGG +
Preference number: 4 (lower is better)
Translates to: SKIALNISLLVITAFLWNHLDPF*WFSTVW
Trigger: CCAGACTGTGCTGAACCACCAAAAGGGATCCAGATG...GTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTATTTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAAGCCTTGACCACTTTTaGAGAGTGTTTATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: NKTERNVLWYACTCTVPGSLDHF*RVFISF
Trigger: AAAGGAGATAAACACTCTCCAAAAGTGGTCAAGGCT...TCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp CTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACTCTTCGATATCTTTTTaGCCATCTTGTGACTGCCAC +
Preference number: 4 (lower is better)
Translates to: LLIFPYWLSQPSYGTGFNSSISF*PSCDCH
Trigger: GTGGCAGTCACAAGATGGTCAAAAAGATATCGAAGA...GTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATAGTTTTCAACGGTCTTaGTATCGATCTCACTGCTCC +
Preference number: 4 (lower is better)
Translates to: FPYWLSQPSYGTGFNKLNSFQRS*YRSHCS
Trigger: GGAGCAGTGAGATCGATAGCAAGACCGTTGAAAACT...ATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp AAAATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGAGGCAAGAAACATCTTaGTGTACAGAGGAACCCCAA +
Preference number: 4 (lower is better)
Translates to: KIALNISLLVITAFLWNRRQETS*CTEEPQ
Trigger: TTGGGGTTCCTCTGTACAGCAAGATGTTTCTTGCCT...CCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp AAAATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGGGCTGTGCTGAAACCTaGTTGTGTTTGATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: KIALNISLLVITAFLWNRGCAET*LCLMSS
Trigger: TGAAGACATCAAACACAACCAGGTTTCAGCACAGCC...CCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR TCA 90 bp TACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATTTGCAGGTATGCGTGAATGTGTaGAAATCCTATAACTCCACT +
Preference number: 4 (lower is better)
Translates to: YWLSQPSYGTGFNKLNLQVCVNV*KSYNST
Trigger: AGTGGAGTTATAGGATTTTCACACATTCACGCATAC...CTGCAAATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304623.13
CDS-3UTR GCA 90 bp TCTAAAATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGTTTTCAACGGTCTTaGTATCGATCTCACTGCTCC +
Preference number: 4 (lower is better)
Translates to: SKIALNISLLVITAFLWNSFQRS*YRSHCS
Trigger: GGAGCAGTGAGATCGATAGCAAGACCGTTGAAAACT...GTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTATTTTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR GCA 90 bp TACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATTTGCAGCTATTCTGTGTCTTGTaGTTAACGATAACCCTTACG +
Preference number: 4 (lower is better)
Translates to: YWLSQPSYGTGFNKLNLQLFCVL*LTITLT
Trigger: CGTAAGGGTTATCGTTAAGCACAAGACACAGAATAG...CTGCAAATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp GGCATTGGTGTAATATACACAACGCGCTTTTCTTCTTTAATCTGTAATGTACATGGCTGTGCTGAAACCTaGTTGTGTTTGATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: GIGVIYTTRFSSLICNVHGCAET*LCLMSS
Trigger: TGAAGACATCAAACACAACCAGGTTTCAGCACAGCC...ATGTACATTACAGATTAAAGAAGAAAAGCGCGTTGTGTATATTACACCAATGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CACGGCGGCATTGGTGTAATATACACAACGCGCTTTTCTTCTTTAATCTGTAATAATTTTTCTAGTACGTaGACATACATACACCCACAC +
Preference number: 4 (lower is better)
Translates to: HGGIGVIYTTRFSSLICNNFSST*TYIHPH
Trigger: GTGTGGGTGTATGTATGTCCACGTACTAGAAAAATT...ATTACAGATTAAAGAAGAAAAGCGCGTTGTGTATATTACACCAATGCCGCCGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304623.13
CDS-3UTR GCA 90 bp GGCATTGGTGTAATATACACAACGCGCTTTTCTTCTTTAATCTGTAATGTACATAAATGTCTTGTGGTATaGATGCACATGCACTGTTCC +
Preference number: 4 (lower is better)
Translates to: GIGVIYTTRFSSLICNVHKCLVV*MHMHCS
Trigger: GGAACAGTGCATGTGCATGCATACCACAAGACATTT...ATGTACATTACAGATTAAAGAAGAAAAGCGCGTTGTGTATATTACACCAATGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CCA 90 bp CTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACGATACTTCAAGTAATTaGCCCCAAAGTGAAACTGAA +
Preference number: 4 (lower is better)
Translates to: LLIFPYWLSQPSYGTGFNDTSSN*PQSETE
Trigger: TTCAGTTTCACTTTGGGGCCAATTACTTGAAGTATC...GTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304623.13
CDS-3UTR CCA 90 bp TCTAAAATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGCCTTGACCACTTTTaGAGAGTGTTTATCTCCTTT +
Preference number: 4 (lower is better)
Translates to: SKIALNISLLVITAFLWNSLDHF*RVFISF
Trigger: AAAGGAGATAAACACTCTCCAAAAGTGGTCAAGGCT...GTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTATTTTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS CCA 90 bp CGCGGCGGCGGCGGCGGCGGCGGCGCGGGCTCGGGCCCCGCCAGGTaGCCGGCGCGGCTGGTCGTGCCTTCTTACAGTTTATTCTGTTGC +
Preference number: 5 (lower is better)
Translates to: RGGGGGGGAGSGPAR*PARLVVPSYSLFCC
Trigger: GCAACAGAATAAACTGTAAGAAGGCACGACCAGCCGCGCCGGCCACCTGGCGGGGCCCGAGCCCGCGCCGCCGCCGCCGCCGCCGCCGCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514132.1
CDS GCA 90 bp TGGCAGACAGCGCGCCCGGCTTCGCTTCTGCTCAAGCCGGGCTGCTaGTTCCGCGTCCCCGCCACGCGCCCAGGTGAGTCGCGCCAGGTG +
Preference number: 5 (lower is better)
Translates to: WQTARPASLLLKPGC*FRVPATRPGESRQV
Trigger: CACCTGGCGCGACTCACCTGGGCGCGTGGCGGGGACGCGGAAGCAGCAGCCCGGCTTGAGCAGAAGCGAAGCCGGGCGCGCTGTCTGCCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495388.6
CDS GCA 90 bp ACCTGGCAGACAGCGCGCCCGGCTTCGCTTCTGCTCAAGCCGGGCTaGTGCTTCCGCGTCCCCGCCACGCGCCCAGGTGAGTCGCGCCAG +
Preference number: 5 (lower is better)
Translates to: TWQTARPASLLLKPG*CFRVPATRPGESRQ
Trigger: CTGGCGCGACTCACCTGGGCGCGTGGCGGGGACGCGGAAGCAGCAGCCCGGCTTGAGCAGAAGCGAAGCCGGGCGCGCTGTCTGCCAGGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495388.6
CDS GCA 90 bp CCACGCGCCCAGGTGAGTCGCGCCAGGTGGCAGCGAGCCTTTACCTaGCAGGCTGCCCGGCCTCTGGAGGGTGGCCGTGGCATACAGCTC +
Preference number: 5 (lower is better)
Translates to: PRAQVSRARWQRAFT*QAARPLEGGRGIQL
Trigger: GAGCTGTATGCCACGGCCACCCTCCAGAGGCCGGGCAGCCTGGCAGGTAAAGGCTCGCTGCCACCTGGCGCGACTCACCTGGGCGCGTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495388.6
CDS CCA 90 bp AGCTCAGCTGGTGGATGGGCGAGGAGGAGATGGTGGACTGCACGGTaGGGGGCGAGGTCACGCGGATCGGGGACAGGCCGGCCGAGGACA +
Preference number: 5 (lower is better)
Translates to: SSAGGWARRRWWTAR*GARSRGSGTGRPRT
Trigger: TGTCCTCGGCCGGCCTGTCCCCGATCCGCGTGACCTCGCCCCCCACCGTGCAGTCCACCATCTCCTCCTCGCCCATCCACCAGCTGAGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000506735.1
ENST00000507430.1
ENST00000511377.5
CDS TCA 90 bp AGGTCACGCGGATCGGGGACAGGCCGGCCGAGGACACGACGATGTTaGTGGGCGAGCTGGTGCTGTAGGACTTGGCCAGGCGGCTGGGCG +
Preference number: 5 (lower is better)
Translates to: RSRGSGTGRPRTRRC*WASWCCRTWPGGWA
Trigger: CGCCCAGCCGCCTGGCCAAGTCCTACAGCACCAGCTCGCCCATCAACATCGTCGTGTCCTCGGCCGGCCTGTCCCCGATCCGCGTGACCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000507430.1
ENST00000511377.5
CDS GCA 90 bp CGGACGCGTGGACCAGGCGCTTGGTGGGCGACAGGGTGGCGTACGTaGCGATGGTGGAGCTCAGCTGGTGGATGGGCGAGGAGGAGATGG +
Preference number: 5 (lower is better)
Translates to: RTRGPGAWWATGWRT*RWWSSAGGWARRRW
Trigger: CCATCTCCTCCTCGCCCATCCACCAGCTGAGCTCCACCATCGGCACGTACGCCACCCTGTCGCCCACCAAGCGCCTGGTCCACGCGTCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000506735.1
ENST00000507430.1
ENST00000511377.5
CDS GCA 90 bp CTGCCCGGCCTCTGGAGGGTGGCCGTGGCATACAGCTCCTGCGAGTaGTTGCTGTACTGCTCGGACGCGTGGACCAGGCGCTTGGTGGGC +
Preference number: 5 (lower is better)
Translates to: LPGLWRVAVAYSSCE*LLYCSDAWTRRLVG
Trigger: GCCCACCAAGCGCCTGGTCCACGCGTCCGAGCAGTACAGCAAGCACTCGCAGGAGCTGTATGCCACGGCCACCCTCCAGAGGCCGGGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000495388.6
ENST00000506735.1
ENST00000507430.1
ENST00000511377.5
CDS GCA 90 bp GCCAGGCTGCCCGGCCTCTGGAGGGTGGCCGTGGCATACAGCTCCTaGGAGTGCTTGCTGTACTGCTCGGACGCGTGGACCAGGCGCTTG +
Preference number: 5 (lower is better)
Translates to: ARLPGLWRVAVAYSS*ECLLYCSDAWTRRL
Trigger: CAAGCGCCTGGTCCACGCGTCCGAGCAGTACAGCAAGCACTCGCAGGAGCTGTATGCCACGGCCACCCTCCAGAGGCCGGGCAGCCTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000495388.6
ENST00000506735.1
ENST00000507430.1
ENST00000511377.5
CDS GCA 90 bp CCAGGTGAGTCGCGCCAGGTGGCAGCGAGCCTTTACCTGCCAGGCTaGCCGGCCTCTGGAGGGTGGCCGTGGCATACAGCTCCTGCGAGT +
Preference number: 5 (lower is better)
Translates to: PGESRQVAASLYLPG*PASGGWPWHTAPAS
Trigger: ACTCGCAGGAGCTGTATGCCACGGCCACCCTCCAGAGGCCGGGCAGCCTGGCAGGTAAAGGCTCGCTGCCACCTGGCGCGACTCACCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495388.6
CDS TCA 90 bp CCGCGCAGAGCCCACCCCCTGTGGACAGGCCACCCAGTGGGGTCCTaGTTACACACCTGTGCTCGTGCGGTAGGTGCCGGTGTGTGCTGG +
Preference number: 5 (lower is better)
Translates to: PRRAHPLWTGHPVGS*LHTCARAVGAGVCW
Trigger: CCAGCACACACCGGCACCTACCGCACGAGCACAGGTGTGTAATCAGGACCCCACTGGGTGGCCTGTCCACAGGGGGTGGGCTCTGCGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506735.1
ENST00000507430.1
CDS GCA 90 bp TGGAGGGTGGCCGTGGCATACAGCTCCTGCGAGTGCTTGCTGTACTaGTCGGACGCGTGGACCAGGCGCTTGGTGGGCGACAGGGTGGCG +
Preference number: 5 (lower is better)
Translates to: WRVAVAYSSCECLLY*SDAWTRRLVGDRVA
Trigger: CGCCACCCTGTCGCCCACCAAGCGCCTGGTCCACGCGTCCGAGCAGTACAGCAAGCACTCGCAGGAGCTGTATGCCACGGCCACCCTCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000506735.1
ENST00000507430.1
ENST00000511377.5
CDS GCA 90 bp CCCCCTGTGGACAGGCCACCCAGTGGGGTCCTGATTACACACCTGTaGTCGTGCGGTAGGTGCCGGTGTGTGCTGGCGGCAGAGGGTCCC +
Preference number: 5 (lower is better)
Translates to: PPVDRPPSGVLITHL*SCGRCRCVLAAEGP
Trigger: GGGACCCTCTGCCGCCAGCACACACCGGCACCTACCGCACGAGCACAGGTGTGTAATCAGGACCCCACTGGGTGGCCTGTCCACAGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506735.1
ENST00000507430.1
CDS CCA 90 bp TGTACTGCTCGGACGCGTGGACCAGGCGCTTGGTGGGCGACAGGGTaGCGTACGTGCCGATGGTGGAGCTCAGCTGGTGGATGGGCGAGG +
Preference number: 5 (lower is better)
Translates to: CTARTRGPGAWWATG*RTCRWWSSAGGWAR
Trigger: CCTCGCCCATCCACCAGCTGAGCTCCACCATCGGCACGTACGCCACCCTGTCGCCCACCAAGCGCCTGGTCCACGCGTCCGAGCAGTACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000506735.1
ENST00000507430.1
ENST00000511377.5
CDS CCA 90 bp GCGCCAGGTGGCAGCGAGCCTTTACCTGCCAGGCTGCCCGGCCTCTaGAGGGTGGCCGTGGCATACAGCTCCTGCGAGTGCTTGCTGTAC +
Preference number: 5 (lower is better)
Translates to: APGGSEPLPARLPGL*RVAVAYSSCECLLY
Trigger: GTACAGCAAGCACTCGCAGGAGCTGTATGCCACGGCCACCCTCCAGAGGCCGGGCAGCCTGGCAGGTAAAGGCTCGCTGCCACCTGGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495388.6
CDS GCA 90 bp CGCGGCGCCGCCCGGCTTCAGGGCAAGGTCCTGACCTTGCCCAACTaGAGCATCTTCCGCTTTTGTTGTCTGAGCGCGGCCGCGGGACAA +
Preference number: 5 (lower is better)
Translates to: RGAARLQGKVLTLPN*SIFRFCCLSAAAGQ
Trigger: TTGTCCCGCGGCCGCGCTCAGACAACAAAAGCGGAAGATGCTGCAGTTGGGCAAGGTCAGGACCTTGCCCTGAAGCCGGGCGGCGCCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000504499.5
CDS CCA 90 bp GGACCAGGCGCTTGGTGGGCGACAGGGTGGCGTACGTGCCGATGGTaGAGCTCAGCTGGTGGATGGGCGAGGAGGAGATGGTGGACTGCA +
Preference number: 5 (lower is better)
Translates to: GPGAWWATGWRTCRW*SSAGGWARRRWWTA
Trigger: TGCAGTCCACCATCTCCTCCTCGCCCATCCACCAGCTGAGCTCCACCATCGGCACGTACGCCACCCTGTCGCCCACCAAGCGCCTGGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000506735.1
ENST00000507430.1
ENST00000511377.5
CDS CCA 90 bp CGTGGACCAGGCGCTTGGTGGGCGACAGGGTGGCGTACGTGCCGATaGTGGAGCTCAGCTGGTGGATGGGCGAGGAGGAGATGGTGGACT +
Preference number: 5 (lower is better)
Translates to: RGPGAWWATGWRTCR*WSSAGGWARRRWWT
Trigger: AGTCCACCATCTCCTCCTCGCCCATCCACCAGCTGAGCTCCACCATCGGCACGTACGCCACCCTGTCGCCCACCAAGCGCCTGGTCCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000506735.1
ENST00000507430.1
ENST00000511377.5
CDS CCA 90 bp GCGAGTGCTTGCTGTACTGCTCGGACGCGTGGACCAGGCGCTTGGTaGGCGACAGGGTGGCGTACGTGCCGATGGTGGAGCTCAGCTGGT +
Preference number: 5 (lower is better)
Translates to: ASACCTARTRGPGAW*ATGWRTCRWWSSAG
Trigger: ACCAGCTGAGCTCCACCATCGGCACGTACGCCACCCTGTCGCCCACCAAGCGCCTGGTCCACGCGTCCGAGCAGTACAGCAAGCACTCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000506735.1
ENST00000507430.1
ENST00000511377.5
CDS CCA 90 bp CCTGCGAGTGCTTGCTGTACTGCTCGGACGCGTGGACCAGGCGCTTaGTGGGCGACAGGGTGGCGTACGTGCCGATGGTGGAGCTCAGCT +
Preference number: 5 (lower is better)
Translates to: PASACCTARTRGPGA*WATGWRTCRWWSSA
Trigger: AGCTGAGCTCCACCATCGGCACGTACGCCACCCTGTCGCCCACCAAGCGCCTGGTCCACGCGTCCGAGCAGTACAGCAAGCACTCGCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000506735.1
ENST00000507430.1
ENST00000511377.5
CDS CCA 90 bp ATGAGGCTCGGGAACCAGCTGCCAGGCTGCCCGGCCTCTGGAGGGTaGCCGTGGCATACAGCTCCTGCGAGTGCTTGCTGTACTGCTCGG +
Preference number: 5 (lower is better)
Translates to: MRLGNQLPGCPASGG*PWHTAPASACCTAR
Trigger: CCGAGCAGTACAGCAAGCACTCGCAGGAGCTGTATGCCACGGCCACCCTCCAGAGGCCGGGCAGCCTGGCAGCTGGTTCCCGAGCCTCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000506735.1
ENST00000507430.1
ENST00000511377.5
CDS GCA 90 bp GCCACATCCTCAGCCCAGCCCTTCCAGCTCCCTGCAGCCAAGTTCTaGAGGGCGCCTGCCGCCCCTTCCAGCGTGTCTGGATTTGAGCAC +
Preference number: 5 (lower is better)
Translates to: ATSSAQPFQLPAAKF*RAPAAPSSVSGFEH
Trigger: GTGCTCAAATCCAGACACGCTGGAAGGGGCGGCAGGCGCCCTGCAGAACTTGGCTGCAGGGAGCTGGAAGGGCTGGGCTGAGGATGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513588.5
CDS CCA 90 bp GTGGCATACAGCTCCTGCGAGTGCTTGCTGTACTGCTCGGACGCGTaGACCAGGCGCTTGGTGGGCGACAGGGTGGCGTACGTGCCGATG +
Preference number: 5 (lower is better)
Translates to: VAYSSCECLLYCSDA*TRRLVGDRVAYVPM
Trigger: CATCGGCACGTACGCCACCCTGTCGCCCACCAAGCGCCTGGTCCACGCGTCCGAGCAGTACAGCAAGCACTCGCAGGAGCTGTATGCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000506735.1
ENST00000507430.1
ENST00000511377.5
CDS CCA 90 bp CTGCTCATGCTGCCAGTCTCGGATCCGAGCTTGCATCGCTCCAGCTaGCTGGCTACGATCTGCCGTTCAGCCTCCAGCTCTCGGGTCAGC +
Preference number: 5 (lower is better)
Translates to: LLMLPVSDPSLHRSS*LATICRSASSSRVS
Trigger: GCTGACCCGAGAGCTGGAGGCTGAACGGCAGATCGTAGCCAGCCAGCTGGAGCGATGCAAGCTCGGATCCGAGACTGGCAGCATGAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000304623.13
ENST00000502551.5
ENST00000503622.5
ENST00000504354.5
ENST00000504499.5
ENST00000508761.1
ENST00000509868.1
ENST00000511278.5
ENST00000511377.5
ENST00000513588.5
ENST00000513598.5
CDS CCA 90 bp CCAGGAAAGCCCTGGCGTTCTCTGTCTCCTGCAACTACTACAACCTaGCAGACAGCGCGCCCGGCTTCGCTTCTGCTCAAGCCGGGCTGC +
Preference number: 5 (lower is better)
Translates to: PGKPWRSLSPATTTT*QTARPASLLLKPGC
Trigger: GCAGCCCGGCTTGAGCAGAAGCGAAGCCGGGCGCGCTGTCTGCCAGGTTGTAGTAGTTGCAGGAGACAGAGAACGCCAGGGCTTTCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495388.6
CDS CCA 90 bp TGTTTTGAGCTGAGCGGTTGTTGGGAGACACGCGCACAGGGGAGATaGAGGGCGTGCGGGAGGAGGAGTAGGGCCTTTGCCGGTCCCTCT +
Preference number: 5 (lower is better)
Translates to: CFELSGCWETRAQGR*RACGRRSRAFAGPS
Trigger: AGAGGGACCGGCAAAGGCCCTACTCCTCCTCCCGCACGCCCTCCATCTCCCCTGTGCGCGTGTCTCCCAACAACCGCTCAGCTCAAAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506324.1
CDS-3UTR CAA 90 bp AGGGCGCCTGCCGCCCCTTCCAGCGTGTCTGGATTTGAGCACTCAGAGAGCAGTCATCTTCCGCTTTTGTaGTCTGAGCGCGGCCGCGGG +
Preference number: 5 (lower is better)
Translates to: RAPAAPSSVSGFEHSESSHLPLL*SERGRG
Trigger: CCCGCGGCCGCGCTCAGACAACAAAAGCGGAAGATG...ACTGCTCTCTGAGTGCTCAAATCCAGACACGCTGGAAGGGGCGGCAGGCGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR CAA 90 bp GTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCCTCACACCCGTCTCGGATCCGAGCTaGCATCGCTCCAGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: VCMHMHCSRSACALLLTPVSDPS*HRSSWL
Trigger: CAGCCAGCTGGAGCGATGCAAGCTCGGATCCGAGAC...GGGTGTGAGGAGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCCGCCGCGCTGCAGCTaGGTGGGCGAACCGCCCTGG +
Preference number: 5 (lower is better)
Translates to: KKCLVVCMHMHCSRSACAPPRCS*VGEPPW
Trigger: CCAGGGCGGTTCGCCCACCAAGCTGCAGCGCGGCGG...GGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS GCA 90 bp CCGGGAGCTGTGAAGGGGTGGTTTCCCCCAGGGCCAGGGTCTGGTTaGTATGGTAGCTGGCCGGATACTGGAAAGACCCTTCAGGTTTGG +
Preference number: 5 (lower is better)
Translates to: PGAVKGWFPPGPGSG*YGSWPDTGKTLQVW
Trigger: CCAAACCTGAAGGGTCTTTCCAGTATCCGGCCAGCTACCATAGCAACCAGACCCTGGCCCTGGGGGAAACCACCCCTTCACAGCTCCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513598.5
CDS GCA 90 bp GGAACCAGCTCATGCTGCTCATGCTGCCAGTCTCGGATCCGAGCTTaGATCGCTCCAGCTGGCTGGCTACGATCTGCCGTTCAGCCTCCA +
Preference number: 5 (lower is better)
Translates to: GTSSCCSCCQSRIRA*IAPAGWLRSAVQPP
Trigger: TGGAGGCTGAACGGCAGATCGTAGCCAGCCAGCTGGAGCGATGCAAGCTCGGATCCGAGACTGGCAGCATGAGCAGCATGAGCTGGTTCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504354.5
CDS CCA 90 bp TCATGCTGCCAGTCTCGGATCCGAGCTTGCATCGCTCCAGCTGGCTaGCTACGATCTGCCGTTCAGCCTCCAGCTCTCGGGTCAGCCTTT +
Preference number: 5 (lower is better)
Translates to: SCCQSRIRACIAPAG*LRSAVQPPALGSAF
Trigger: AAAGGCTGACCCGAGAGCTGGAGGCTGAACGGCAGATCGTAGCCAGCCAGCTGGAGCGATGCAAGCTCGGATCCGAGACTGGCAGCATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000304623.13
ENST00000502551.5
ENST00000503622.5
ENST00000504354.5
ENST00000504499.5
ENST00000508761.1
ENST00000509868.1
ENST00000511278.5
ENST00000511377.5
ENST00000513588.5
ENST00000513598.5
CDS-3UTR CAA 90 bp CCAGGTGCATGGTGTACTCGCTGGCGGGAGGGCGATGGTGGACCTGGTCCTCGATCCAAAACAGAGGTGTaGCAAGTAGGCTGCCGCGTT +
Preference number: 5 (lower is better)
Translates to: PGAWCTRWREGDGGPGPRSKTEV*QVGCRV
Trigger: AACGCGGCAGCCTACTTGCAACACCTCTGTTTTGGA...TCGAGGACCAGGTCCACCATCGCCCTCCCGCCAGCGAGTACACCATGCACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GCTGTCGGTAGGGGTCCGCGTAATTGGAGGCTGGGCCGGCGGCATAGCTGGCCCGCGTTCTCCATGTTCTaGGTAATCACTTCGTGCAGT +
Preference number: 5 (lower is better)
Translates to: AVGRGPRNWRLGRRHSWPAFSMF*VITSCS
Trigger: ACTGCACGAAGTGATTACCAAGAACATGGAGAACGC...GGGCCAGCTATGCCGCCGGCCCAGCCTCCAATTACGCGGACCCCTACCGACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR CAA 90 bp GGCATAGCTGGCCCTCTGGAAGGTGGCCGCGGCGGCATTCTGTGGGCCGTGCTGGAGTGTTTATCTCCTTaGCTTTTGGAGATGCCGACC +
Preference number: 5 (lower is better)
Translates to: GIAGPLEGGRGGILWAVLECLSP*LLEMPT
Trigger: GGTCGGCATCTCCAAAAGCAAAGGAGATAAACACTC...CAGCACGGCCCACAGAATGCCGCCGCGGCCACCTTCCAGAGGGCCAGCTATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR CAA 90 bp TTGCTGAGCGGTTGTTGGGAGACACGCGCACAGGGGAGATGGAGGGCGTGCGGGGGTCCCTCTCGATGGTaGAAGACGAGGCTACAAAGT +
Preference number: 5 (lower is better)
Translates to: LLSGCWETRAQGRWRACGGPSRW*KTRLQS
Trigger: ACTTTGTAGCCTCGTCTTCAACCATCGAGAGGGACC...CCCGCACGCCCTCCATCTCCCCTGTGCGCGTGTCTCCCAACAACCGCTCAGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR CAA 90 bp TGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCGGAGGAGTAGGGCCTTaGCCGGTCCCTCTCGATGGT +
Preference number: 5 (lower is better)
Translates to: CLVVCMHMHCSRSACALLGGVGP*PVPLDG
Trigger: ACCATCGAGAGGGACCGGCAAAGGCCCTACTCCTCC...GAGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp TGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCCTTGCTGAGCGGTTGTaGGGAGACACGCGCACAGGG +
Preference number: 5 (lower is better)
Translates to: CLVVCMHMHCSRSACALLLAERL*GDTRTG
Trigger: CCCTGTGCGCGTGTCTCCCAACAACCGCTCAGCAAG...GAGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GGAGGCCGGGTAGTGGCTCGTTTCATAGTTCAGTTCACTGTAGGGACGGGCAGCCTTGCTGAGCGGTTGTaGGGAGACACGCGCACAGGG +
Preference number: 5 (lower is better)
Translates to: GGRVVARFIVQFTVGTGSLAERL*GDTRTG
Trigger: CCCTGTGCGCGTGTCTCCCAACAACCGCTCAGCAAG...GCTGCCCGTCCCTACAGTGAACTGAACTATGAAACGAGCCACTACCCGGCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS GCA 90 bp CTGCTGAACTCATGCTGCTCATGCTGCCAGTCTCGGATCCGAGCTTaGATCGCTCCAGCTGGCTGGCTACGATCTGCCGTTCAGCCTCCA +
Preference number: 5 (lower is better)
Translates to: LLNSCCSCCQSRIRA*IAPAGWLRSAVQPP
Trigger: TGGAGGCTGAACGGCAGATCGTAGCCAGCCAGCTGGAGCGATGCAAGCTCGGATCCGAGACTGGCAGCATGAGCAGCATGAGTTCAGCAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000304623.13
ENST00000502551.5
ENST00000503622.5
ENST00000504499.5
ENST00000508761.1
ENST00000511278.5
ENST00000511377.5
ENST00000513588.5
ENST00000513598.5
CDS-3UTR CAA 90 bp GGAGGCCGGGTAGTGGCTCGTTTCATAGTTCAGTTCACTGTAGGGACGGGCAGCCAGCATCTTCCGCTTTaGTTGTCTGAGCGCGGCCGC +
Preference number: 5 (lower is better)
Translates to: GGRVVARFIVQFTVGTGSQHLPL*LSERGR
Trigger: GCGGCCGCGCTCAGACAACAAAAGCGGAAGATGCTG...GCTGCCCGTCCCTACAGTGAACTGAACTATGAAACGAGCCACTACCCGGCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CAA 90 bp CTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGAAGCCGTCCGCCGCGCTGCAGCTaGGTGGGCGAACCGCCCTGG +
Preference number: 5 (lower is better)
Translates to: LKPRVTTDEESKQSVRSRPPRCS*VGEPPW
Trigger: CCAGGGCGGTTCGCCCACCAAGCTGCAGCGCGGCGG...ACGGCTTCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CAA 90 bp CCCACCGGCCCGAATGCCTCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGAGCTCCTGCGAGTGCTaGCTGTACTGCTCGGACGCG +
Preference number: 5 (lower is better)
Translates to: PTGPNASSLLPSTTFSIKSSCEC*LYCSDA
Trigger: CGCGTCCGAGCAGTACAGCAAGCACTCGCAGGAGCT...CTTTATACTGAACGTGGTTGATGGGAGGAGAGACGAGGCATTCGGGCCGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CAA 90 bp GTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCCTCACACCCTCCAGGTCAGTCGTCTaGCGGAGTAACCTCACCAGT +
Preference number: 5 (lower is better)
Translates to: VCMHMHCSRSACALLLTPSRSVV*RSNLTS
Trigger: ACTGGTGAGGTTACTCCGCAAGACGACTGACCTGGA...GGGTGTGAGGAGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GTGTACTCGCTGGCGGGAGGGCGATGGTGGACCTGGTCCTCGAAGAAGGACTCACCAGCGTGTCTGGATTaGAGCACTCAGAGAGCAGTG +
Preference number: 5 (lower is better)
Translates to: VYSLAGGRWWTWSSKKDSPACLD*STQRAV
Trigger: CACTGCTCTCTGAGTGCTCAAATCCAGACACGCTGG...TGAGTCCTTCTTCGAGGACCAGGTCCACCATCGCCCTCCCGCCAGCGAGTACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS GCA 90 bp TCGGGAACCAGTTGTTCCAGGAAAGCCCTGGCGTTCTCTGTCTCCTaGAACTACTACAACCTGGCAGACAGCGCGCCCGGCTTCGCTTCT +
Preference number: 5 (lower is better)
Translates to: SGTSCSRKALAFSVS*NYYNLADSAPGFAS
Trigger: AGAAGCGAAGCCGGGCGCGCTGTCTGCCAGGTTGTAGTAGTTGCAGGAGACAGAGAACGCCAGGGCTTTCCTGGAACAACTGGTTCCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495388.6
CDS GCA 90 bp TTCTGCTTCTCATGCTGCTCATGCTGCCAGTCTCGGATCCGAGCTTaGATCGCTCCAGCTGGCTGGCTACGATCTGCCGTTCAGCCTCCA +
Preference number: 5 (lower is better)
Translates to: FCFSCCSCCQSRIRA*IAPAGWLRSAVQPP
Trigger: TGGAGGCTGAACGGCAGATCGTAGCCAGCCAGCTGGAGCGATGCAAGCTCGGATCCGAGACTGGCAGCATGAGCAGCATGAGAAGCAGAA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509868.1
CDS CCA 90 bp GGAACAGGCATAGCTCCTGGCTTTCAGGCGGCGCTTTCTGGAGCCTaGCTGTCTATTGTCAGCACGCAGAAGCCCCCGAAACCTGTGAAG +
Preference number: 5 (lower is better)
Translates to: GTGIAPGFQAALSGA*LSIVSTQKPPKPVK
Trigger: CTTCACAGGTTTCGGGGGCTTCTGCGTGCTGACAATAGACAGCCAGGCTCCAGAAAGCGCCGCCTGAAAGCCAGGAGCTATGCCTGTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508761.1
CDS-3UTR CAA 90 bp AGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCGTCTCGGATCCGAGCTaGCATCGCTCCAGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: RNVLWYACTCTVPGAPVPVSDPS*HRSSWL
Trigger: CAGCCAGCTGGAGCGATGCAAGCTCGGATCCGAGAC...GGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp CTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCCTCGTGAGCTCTCAGCATCCTaGCCATTGGCCTCGCCACAG +
Preference number: 5 (lower is better)
Translates to: LCLVLNDNPYAPPARMPRELSAS*PLASPQ
Trigger: CTGTGGCGAGGCCAATGGCAAGGATGCTGAGAGCTC...ACGAGGCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AGGGCGCCTGCCGCCCCTTCCAGCGTGTCTGGATTTGAGCACTCAGAGAGCAGTTCATCCGACATGGCCTaGCTTGCAGTGTTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: RAPAAPSSVSGFEHSESSSSDMA*LAVLLL
Trigger: CAGCAACAACACTGCAAGCAAGGCCATGTCGGATGA...ACTGCTCTCTGAGTGCTCAAATCCAGACACGCTGGAAGGGGCGGCAGGCGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR CAA 90 bp ACCGGCCCGAATGCCTCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGCACGGAGGAGTAGGGCCTTaGCCGGTCCCTCTCGATGGT +
Preference number: 5 (lower is better)
Translates to: TGPNASSLLPSTTFSIKHGGVGP*PVPLDG
Trigger: ACCATCGAGAGGGACCGGCAAAGGCCCTACTCCTCC...GTGCTTTATACTGAACGTGGTTGATGGGAGGAGAGACGAGGCATTCGGGCCGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTTGCTGAGCGGTTGTaGGGAGACACGCGCACAGGG +
Preference number: 5 (lower is better)
Translates to: KCLVVCMHMHCSRSACALLAERL*GDTRTG
Trigger: CCCTGTGCGCGTGTCTCCCAACAACCGCTCAGCAAG...CAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS GCA 90 bp GTCTCGGATCCGAGCTTGCATCGCTCCAGCTGGCTGGCTACGATCTaGCGTTCAGCCTCCAGCTCTCGGGTCAGCCTTTCAAACTGTAAT +
Preference number: 5 (lower is better)
Translates to: VSDPSLHRSSWLATI*RSASSSRVSLSNCN
Trigger: ATTACAGTTTGAAAGGCTGACCCGAGAGCTGGAGGCTGAACGGCAGATCGTAGCCAGCCAGCTGGAGCGATGCAAGCTCGGATCCGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000304623.13
ENST00000502551.5
ENST00000503622.5
ENST00000504354.5
ENST00000504499.5
ENST00000508761.1
ENST00000509868.1
ENST00000511278.5
ENST00000511377.5
ENST00000513588.5
ENST00000513598.5
CDS CCA 90 bp AGGCGAGGATGGCAGAGGTGGTTTCTGTTTCAGAGCCATCCCCGTTaGAGGTGTTTAAGCCGGGGCTCAGGGAACTCGTCTTCTCTGAGG +
Preference number: 5 (lower is better)
Translates to: RRGWQRWFLFQSHPR*RCLSRGSGNSSSLR
Trigger: CCTCAGAGAAGACGAGTTCCCTGAGCCCCGGCTTAAACACCTCCAACGGGGATGGCTCTGAAACAGAAACCACCTCTGCCATCCTCGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000304623.13
ENST00000502551.5
ENST00000504499.5
ENST00000508761.1
ENST00000509868.1
ENST00000511278.5
ENST00000513588.5
CDS-3UTR CAA 90 bp CTATTCTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCGTCTCGGATCCGAGCTaGCATCGCTCCAGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: LFCVLCLTITLTPHRPECVSDPS*HRSSWL
Trigger: CAGCCAGCTGGAGCGATGCAAGCTCGGATCCGAGAC...GCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAGAATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GAGGGCGATGGTGGACCTGGTCCTCGAAGAAGGACTCATCGTAATTTCTTGTGGGTCTCGGATCCGAGCTaGCATCGCTCCAGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: EGDGGPGPRRRTHRNFLWVSDPS*HRSSWL
Trigger: CAGCCAGCTGGAGCGATGCAAGCTCGGATCCGAGAC...CCACAAGAAATTACGATGAGTCCTTCTTCGAGGACCAGGTCCACCATCGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CAA 90 bp CAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCGTGGACCAGGCGCTaGGTGGGCGACAGGGTGGCG +
Preference number: 5 (lower is better)
Translates to: QNRKKCLVVCMHMHCSRSAWTRR*VGDRVA
Trigger: CGCCACCCTGTCGCCCACCAAGCGCCTGGTCCACGC...GCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CAA 90 bp TGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCGGGATAATCACCGCGTaGGTCAGTACTGCTAGGGCA +
Preference number: 5 (lower is better)
Translates to: CLVVCMHMHCSRSACALLGIITA*VSTARA
Trigger: TGCCCTAGCAGTACTGACCAACGCGGTGATTATCCC...GAGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCGAGCTCTCAGCATCCTaGCCATTGGCCTCGCCACAG +
Preference number: 5 (lower is better)
Translates to: RNVLWYACTCTVPGAPVPELSAS*PLASPQ
Trigger: CTGTGGCGAGGCCAATGGCAAGGATGCTGAGAGCTC...GGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp ACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGGCCCGTAGCTCGGGCTaGTGTGCCTCGGGCCGGGAG +
Preference number: 5 (lower is better)
Translates to: TKQKEMSCGMHAHALFPEARSSG*CASGRE
Trigger: CTCCCGGCCCGAGGCACACAAGCCCGAGCTACGGGC...CTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
CDS-3UTR CAA 90 bp AAGACGAGGCTACAAAGTGGTATTGTGACCATCCATCCTTTTTGTAGAGACTCCGCCCGTAGCTCGGGCTaGTGTGCCTCGGGCCGGGAG +
Preference number: 5 (lower is better)
Translates to: KTRLQSGIVTIHPFCRDSARSSG*CASGRE
Trigger: CTCCCGGCCCGAGGCACACAAGCCCGAGCTACGGGC...GGAGTCTCTACAAAAAGGATGGATGGTCACAATACCACTTTGTAGCCTCGTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR CAA 90 bp CTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCCTCGTCTCTCCTCCAAAACAGAGGTGTaGCAAGTAGGCTGCCGCGTT +
Preference number: 5 (lower is better)
Translates to: LVLNDNPYAPPARMPRLSSKTEV*QVGCRV
Trigger: AACGCGGCAGCCTACTTGCAACACCTCTGTTTTGGA...GGAGAGACGAGGCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp CTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCCTCGTGGGATAATCACCGCGTaGGTCAGTACTGCTAGGGCA +
Preference number: 5 (lower is better)
Translates to: LCLVLNDNPYAPPARMPRGIITA*VSTARA
Trigger: TGCCCTAGCAGTACTGACCAACGCGGTGATTATCCC...ACGAGGCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTCAGCATCCTTGCCATaGGCCTCGCCACAGAGTAGC +
Preference number: 5 (lower is better)
Translates to: RNVLWYACTCTVPGAPVPSASLP*ASPQSS
Trigger: GCTACTCTGTGGCGAGGCCAATGGCAAGGATGCTGA...GGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCCCAGCGTGTCTGGATTaGAGCACTCAGAGAGCAGTG +
Preference number: 5 (lower is better)
Translates to: NVLWYACTCTVPGAPVPCPACLD*STQRAV
Trigger: CACTGCTCTCTGAGTGCTCAAATCCAGACACGCTGG...GCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp CTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCCTCGTCTCTCCCCGACATGGCCTTGCTaGCAGTGTTGTTGCTGTTGT +
Preference number: 5 (lower is better)
Translates to: LVLNDNPYAPPARMPRLSPTWPC*QCCCCC
Trigger: ACAACAGCAACAACACTGCAAGCAAGGCCATGTCGG...GGAGAGACGAGGCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp TGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCTCATCCGACATGGCCTaGCTTGCAGTGTTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: CLVVCMHMHCSRSACALLSSDMA*LAVLLL
Trigger: CAGCAACAACACTGCAAGCAAGGCCATGTCGGATGA...GAGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCCTCACACCCGAGTGTTTATCTCCTTaGCTTTTGGAGATGCCGACC +
Preference number: 5 (lower is better)
Translates to: VCMHMHCSRSACALLLTPECLSP*LLEMPT
Trigger: GGTCGGCATCTCCAAAAGCAAAGGAGATAAACACTC...GGGTGTGAGGAGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCGGAGGAGTAGGGCCTTaGCCGGTCCCTCTCGATGGT +
Preference number: 5 (lower is better)
Translates to: KEMSCGMHAHALFPERLCGGVGP*PVPLDG
Trigger: ACCATCGAGAGGGACCGGCAAAGGCCCTACTCCTCC...GCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCGCACTTGCTGAGCGGTaGTTGGGAGACACGCGCACA +
Preference number: 5 (lower is better)
Translates to: KKCLVVCMHMHCSRSACAALAER*LGDTRT
Trigger: TGTGCGCGTGTCTCCCAACAACCGCTCAGCAAGTGC...GGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS GCA 90 bp AGGAAACGTCTCAGGAGCAGCGCTGAGGTGTTCCCTTGTAGGGTCTaGACATGGAGGCAGAATGTGCTCCTGTCATGGCATCTTTCCTGG +
Preference number: 5 (lower is better)
Translates to: RKRLRSSAEVFPCRV*TWRQNVLLSWHLSW
Trigger: CCAGGAAAGATGCCATGACAGGAGCACATTCTGCCTCCATGTGCAGACCCTACAAGGGAACACCTCAGCGCTGCTCCTGAGACGTTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513588.5
CDS-3UTR CAA 90 bp GAGGAAACACGGCGGCATTGGTGTAATATACACAACGCGCTTTTCTTCTTTAATGCGTGGACCAGGCGCTaGGTGGGCGACAGGGTGGCG +
Preference number: 5 (lower is better)
Translates to: EETRRHWCNIHNALFFFNAWTRR*VGDRVA
Trigger: CGCCACCCTGTCGCCCACCAAGCGCCTGGTCCACGC...ATTAAAGAAGAAAAGCGCGTTGTGTATATTACACCAATGCCGCCGTGTTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304623.13
CDS-3UTR CAA 90 bp ATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTAGAGCAGGGCCGGATTaGCTGTATGGAGACTCAACA +
Preference number: 5 (lower is better)
Translates to: MSCGMHAHALFPERLCPARAGPD*LYGDST
Trigger: TGTTGAGTCTCCATACAGCAAATCCGGCCCTGCTCT...AGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCGAGCTGGATGCCTCCTaGTCTCCTTATCTCGGCTTT +
Preference number: 5 (lower is better)
Translates to: NVLWYACTCTVPGAPVPCELDAS*SPYLGF
Trigger: AAAGCCGAGATAAGGAGACAAGGAGGCATCCAGCTC...GCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGGGATAATCACCGCGTaGGTCAGTACTGCTAGGGCA +
Preference number: 5 (lower is better)
Translates to: EMSCGMHAHALFPERLCPGIITA*VSTARA
Trigger: TGCCCTAGCAGTACTGACCAACGCGGTGATTATCCC...AGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp TTTGCCGATGAGCTCCTTATTTCTGACGTCCAAGGCCATGTTCCGCAGCGCAGTTCAGCATCCTTGCCATaGGCCTCGCCACAGAGTAGC +
Preference number: 5 (lower is better)
Translates to: FADELLISDVQGHVPQRSSASLP*ASPQSS
Trigger: GCTACTCTGTGGCGAGGCCAATGGCAAGGATGCTGA...ACTGCGCTGCGGAACATGGCCTTGGACGTCAGAAATAAGGAGCTCATCGGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR CAA 90 bp GAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGGAGCTCTCAGCATCCTaGCCATTGGCCTCGCCACAG +
Preference number: 5 (lower is better)
Translates to: ERNVLWYACTCTVPGAPVELSAS*PLASPQ
Trigger: CTGTGGCGAGGCCAATGGCAAGGATGCTGAGAGCTC...CACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp CTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCCTCGTCTCTCCTTTTTCTTCTTCTTCTaGCCCCAGCACCCAGAGCTC +
Preference number: 5 (lower is better)
Translates to: LVLNDNPYAPPARMPRLSFFFFF*PQHPEL
Trigger: GAGCTCTGGGTGCTGGGGCAAGAAGAAGAAGAAAAA...GGAGAGACGAGGCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCCCAGCGTGTCTGGATTaGAGCACTCAGAGAGCAGTG +
Preference number: 5 (lower is better)
Translates to: RNVLWYACTCTVPGAPVPPACLD*STQRAV
Trigger: CACTGCTCTCTGAGTGCTCAAATCCAGACACGCTGG...GGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GTTCACTGTAGGGACGGGCAGCTGAGTAGAAGTCAACGTAGTTGCCGGTGGACTCCAGCGTGTCTGGATTaGAGCACTCAGAGAGCAGTG +
Preference number: 5 (lower is better)
Translates to: VHCRDGQLSRSQRSCRWTPACLD*STQRAV
Trigger: CACTGCTCTCTGAGTGCTCAAATCCAGACACGCTGG...AGTCCACCGGCAACTACGTTGACTTCTACTCAGCTGCCCGTCCCTACAGTGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CAA 90 bp TCGATCTCACTGCTCCCCAGCGCAGACTGGATCACGTACAGCAAGGCATCCGTAGCCTTGCTTGCAGTGTaGTTGCTGTTGTTCCCTCCT +
Preference number: 5 (lower is better)
Translates to: SISLLPSADWITYSKASVALLAV*LLLFPP
Trigger: AGGAGGGAACAACAGCAACAACACTGCAAGCAAGGC...TACGGATGCCTTGCTGTACGTGATCCAGTCTGCGCTGGGGAGCAGTGAGATCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR CAA 90 bp CTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCCTCGTCCGACATGGCCTTGCTaGCAGTGTTGTTGCTGTTGT +
Preference number: 5 (lower is better)
Translates to: LCLVLNDNPYAPPARMPRPTWPC*QCCCCC
Trigger: ACAACAGCAACAACACTGCAAGCAAGGCCATGTCGG...ACGAGGCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GCACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATGGAGGAGTAGGGCCTTaGCCGGTCCCTCTCGATGGT +
Preference number: 5 (lower is better)
Translates to: ALLVTLQLTLERCCPLSYGGVGP*PVPLDG
Trigger: ACCATCGAGAGGGACCGGCAAAGGCCCTACTCCTCC...ATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCGCACTTGCTGAGCGGTaGTTGGGAGACACGCGCACA +
Preference number: 5 (lower is better)
Translates to: KEMSCGMHAHALFPERLCALAER*LGDTRT
Trigger: TGTGCGCGTGTCTCCCAACAACCGCTCAGCAAGTGC...GCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp TCTGAAATGGCTGGTAGGTCTCGTAATCTTTTCTGCTGGGCTCCTGTGGGACTGGCACTTGCTGAGCGGTaGTTGGGAGACACGCGCACA +
Preference number: 5 (lower is better)
Translates to: SEMAGRSRNLFCWAPVGLALAER*LGDTRT
Trigger: TGTGCGCGTGTCTCCCAACAACCGCTCAGCAAGTGC...CAGTCCCACAGGAGCCCAGCAGAAAAGATTACGAGACCTACCAGCCATTTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS CCA 90 bp GGGGCTCAGGGTCTGGCAAGCCGCGGGAGCCTGAAGACACGGCCATaGACGCATATGACTAAGTCTTTCCATTTTGTTCTAGCCAAACAT +
Preference number: 5 (lower is better)
Translates to: GAQGLASRGSLKTRP*THMTKSFHFVLAKH
Trigger: ATGTTTGGCTAGAACAAAATGGAAAGACTTAGTCATATGCGTCCATGGCCGTGTCTTCAGGCTCCCGCGGCTTGCCAGACCCTGAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508761.1
CDS-3UTR CAA 90 bp CGGATCTCCAGGTCAGTCGTCTTGCGGAGTAACCTCACCAGTGCTGGGATGCCATGTAATTCCTGTTCTTaGACTGAGGCGAGGATGGCA +
Preference number: 5 (lower is better)
Translates to: RISRSVVLRSNLTSAGMPCNSCS*TEARMA
Trigger: TGCCATCCTCGCCTCAGTCAAAGAACAGGAATTACA...TGGCATCCCAGCACTGGTGAGGTTACTCCGCAAGACGACTGACCTGGAGATCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR CAA 90 bp AACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCGAGCTCTCAGCATCCTaGCCATTGGCCTCGCCACAG +
Preference number: 5 (lower is better)
Translates to: NRKKCLVVCMHMHCSRSAELSAS*PLASPQ
Trigger: CTGTGGCGAGGCCAATGGCAAGGATGCTGAGAGCTC...GGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGGCATCTGGATCCCTTTaGGTGGTTCAGCACAGTCTG +
Preference number: 5 (lower is better)
Translates to: KCLVVCMHMHCSRSACALASGSL*VVQHSL
Trigger: CAGACTGTGCTGAACCACCAAAAGGGATCCAGATGC...CAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp TGTCATGGCATCTTTCCTGGAAGTGTGTTCGCCTTTAGCTCCGTGGTAGGTGGCCACACCACACGGTCATaGTCTATTCGGAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: CHGIFPGSVFAFSSVVGGHTTRS*SIRSSS
Trigger: GGAGCTGCTCCGAATAGACAATGACCGTGTGGTGTG...GCCACCTACCACGGAGCTAAAGGCGAACACACTTCCAGGAAAGATGCCATGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR CAA 90 bp GAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCCTTGCTTGCAGTGTaGTTGCTGTTGTTCCCTCCT +
Preference number: 5 (lower is better)
Translates to: EMSCGMHAHALFPERLCPALLAV*LLLFPP
Trigger: AGGAGGGAACAACAGCAACAACACTGCAAGCAAGGC...AGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTCATCCGACATGGCCTaGCTTGCAGTGTTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: RNVLWYACTCTVPGAPVPSSDMA*LAVLLL
Trigger: CAGCAACAACACTGCAAGCAAGGCCATGTCGGATGA...GGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GGGAGGGCGATGGTGGACCTGGTCCTCGAAGAAGGACTCATCGTAATTTCTTGTGCATCCCGTAAGGCCTaGGCGTTCTCCATGTTCTTG +
Preference number: 5 (lower is better)
Translates to: GRAMVDLVLEEGLIVISCASRKA*AFSMFL
Trigger: CAAGAACATGGAGAACGCCAAGGCCTTACGGGATGC...ACAAGAAATTACGATGAGTCCTTCTTCGAGGACCAGGTCCACCATCGCCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CAA 90 bp CTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCCTCGTCTCTCCGAGTGTTTATCTCCTTaGCTTTTGGAGATGCCGACC +
Preference number: 5 (lower is better)
Translates to: LVLNDNPYAPPARMPRLSECLSP*LLEMPT
Trigger: GGTCGGCATCTCCAAAAGCAAAGGAGATAAACACTC...GGAGAGACGAGGCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGGGTCCCTCTCGATGGTaGAAGACGAGGCTACAAAGT +
Preference number: 5 (lower is better)
Translates to: KCLVVCMHMHCSRSACALGPSRW*KTRLQS
Trigger: ACTTTGTAGCCTCGTCTTCAACCATCGAGAGGGACC...CAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GTGTGTAAACTATTCTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGGGAGGAGTAGGGCCTTaGCCGGTCCCTCTCGATGGT +
Preference number: 5 (lower is better)
Translates to: VCKLFCVLCLTITLTPHRGGVGP*PVPLDG
Trigger: ACCATCGAGAGGGACCGGCAAAGGCCCTACTCCTCC...CCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAGAATAGTTTACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCGAAACCTGGTTGTGTTaGATGTCTTCAGCGGGCGCA +
Preference number: 5 (lower is better)
Translates to: RNVLWYACTCTVPGAPVPETWLC*MSSAGA
Trigger: TGCGCCCGCTGAAGACATCAAACACAACCAGGTTTC...GGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGAAACCTGGTTGTGTTaGATGTCTTCAGCGGGCGCA +
Preference number: 5 (lower is better)
Translates to: EMSCGMHAHALFPERLCPETWLC*MSSAGA
Trigger: TGCGCCCGCTGAAGACATCAAACACAACCAGGTTTC...AGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GGAGGCCGGGTAGTGGCTCGTTTCATAGTTCAGTTCACTGTAGGGACGGGCAGCTGTGCTGAAACCTGGTaGTGTTTGATGTCTTCAGCG +
Preference number: 5 (lower is better)
Translates to: GGRVVARFIVQFTVGTGSCAETW*CLMSSA
Trigger: CGCTGAAGACATCAAACACAACCAGGTTTCAGCACA...GCTGCCCGTCCCTACAGTGAACTGAACTATGAAACGAGCCACTACCCGGCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CAA 90 bp TCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACCATCTTCCGCTTTTGTaGTCTGAGCGCGGCCGCGGG +
Preference number: 5 (lower is better)
Translates to: SSLLPSTTFSIKHFSLLYHLPLL*SERGRG
Trigger: CCCGCGGCCGCGCTCAGACAACAAAAGCGGAAGATG...GTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTTGATGGGAGGAGAGACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304623.13
CDS-3UTR CAA 90 bp CAAAAGGCAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCCAGCATCTTCCGCTTTaGTTGTCTGAGCGCGGCCGC +
Preference number: 5 (lower is better)
Translates to: QKARNILLYRGTPMQPEAQHLPL*LSERGR
Trigger: GCGGCCGCGCTCAGACAACAAAAGCGGAAGATGCTG...GGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTGCCTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000513588.5
CDS-3UTR CAA 90 bp AAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCTCAGAGCCATCCCCGTaGGAGGTGTTTAAGCCGGGG +
Preference number: 5 (lower is better)
Translates to: KQKEMSCGMHAHALFPERSEPSP*EVFKPG
Trigger: CCCCGGCTTAAACACCTCCAACGGGGATGGCTCTGA...GCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CAA 90 bp CAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCTAGAGTCGAGGACACGACGATGTaGATGGGCGAGCTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: QETSCCTEEPQCNLKPRVEDTTM*MGELVL
Trigger: CAGCACCAGCTCGCCCATCAACATCGTCGTGTCCTC...GACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CAA 90 bp TGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCATTTTGTTATCATCGTaGGCCTTCCCATACACCAGG +
Preference number: 5 (lower is better)
Translates to: CLVVCMHMHCSRSACALLILLSS*AFPYTR
Trigger: CCTGGTGTATGGGAAGGCCAACGATGATAACAAAAT...GAGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GGAGGCCGGGTAGTGGCTCGTTTCATAGTTCAGTTCACTGTAGGGACGGGCAGCATTTTGTTATCATCGTaGGCCTTCCCATACACCAGG +
Preference number: 5 (lower is better)
Translates to: GGRVVARFIVQFTVGTGSILLSS*AFPYTR
Trigger: CCTGGTGTATGGGAAGGCCAACGATGATAACAAAAT...GCTGCCCGTCCCTACAGTGAACTGAACTATGAAACGAGCCACTACCCGGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CAA 90 bp TCTGAAATGGCTGGTAGGTCTCGTAATCTTTTCTGCTGGGCTCCTGTGGGACTGGGGATAATCACCGCGTaGGTCAGTACTGCTAGGGCA +
Preference number: 5 (lower is better)
Translates to: SEMAGRSRNLFCWAPVGLGIITA*VSTARA
Trigger: TGCCCTAGCAGTACTGACCAACGCGGTGATTATCCC...CAGTCCCACAGGAGCCCAGCAGAAAAGATTACGAGACCTACCAGCCATTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GTGTACTCGCTGGCGGGAGGGCGATGGTGGACCTGGTCCTCGAAGAAGGACTCATCCATCCCACTGATCTaGGGATTTCTTTTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: VYSLAGGRWWTWSSKKDSSIPLI*GFLFLL
Trigger: AAGAAGAAAAAGAAATCCCAAGATCAGTGGGATGGA...TGAGTCCTTCTTCGAGGACCAGGTCCACCATCGCCCTCCCGCCAGCGAGTACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CAA 90 bp CTATTCTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCGCCTTGCTTGCAGTGTaGTTGCTGTTGTTCCCTCCT +
Preference number: 5 (lower is better)
Translates to: LFCVLCLTITLTPHRPECALLAV*LLLFPP
Trigger: AGGAGGGAACAACAGCAACAACACTGCAAGCAAGGC...GCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAGAATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCGCGTTCTCCATGTTCTaGGTAATCACTTCGTGCAGT +
Preference number: 5 (lower is better)
Translates to: NVLWYACTCTVPGAPVPCAFSMF*VITSCS
Trigger: ACTGCACGAAGTGATTACCAAGAACATGGAGAACGC...GCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCGCATCCCGTAAGGCCTaGGCGTTCTCCATGTTCTTG +
Preference number: 5 (lower is better)
Translates to: KEMSCGMHAHALFPERLCASRKA*AFSMFL
Trigger: CAAGAACATGGAGAACGCCAAGGCCTTACGGGATGC...GCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp ATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTGAGTGTTTATCTCCTTaGCTTTTGGAGATGCCGACC +
Preference number: 5 (lower is better)
Translates to: MSCGMHAHALFPERLCPAECLSP*LLEMPT
Trigger: GGTCGGCATCTCCAAAAGCAAAGGAGATAAACACTC...AGCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp CTCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGCACTTCTCGTTACTCTAGGAGGAGTAGGGCCTTaGCCGGTCCCTCTCGATGGT +
Preference number: 5 (lower is better)
Translates to: LVSPPINHVQYKALLVTLGGVGP*PVPLDG
Trigger: ACCATCGAGAGGGACCGGCAAAGGCCCTACTCCTCC...TAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTTGATGGGAGGAGAGACGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GGACTTGAGACCCAGGTGCATGGTGTACTCGCTGGCGGGAGGGCGATGGTGGACACTCATCGTAATTTCTaGTGGAATTCTGAAATGGCT +
Preference number: 5 (lower is better)
Translates to: GLETQVHGVLAGGRAMVDTHRNF*WNSEMA
Trigger: AGCCATTTCAGAATTCCACAAGAAATTACGATGAGT...GTCCACCATCGCCCTCCCGCCAGCGAGTACACCATGCACCTGGGTCTCAAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GGATGCCACCACAGTTTTTCAGGGCAATTTTGTTATCATCGTTGGCCTTCCCATTCAGAGCCATCCCCGTaGGAGGTGTTTAAGCCGGGG +
Preference number: 5 (lower is better)
Translates to: GCHHSFSGQFCYHRWPSHSEPSP*EVFKPG
Trigger: CCCCGGCTTAAACACCTCCAACGGGGATGGCTCTGA...ATGGGAAGGCCAACGATGATAACAAAATTGCCCTGAAAAACTGTGGTGGCATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR CAA 90 bp AAAATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGGCCCGTAGCTCGGGCTaGTGTGCCTCGGGCCGGGAG +
Preference number: 5 (lower is better)
Translates to: KIALNISLLVITAFLWNRARSSG*CASGRE
Trigger: CTCCCGGCCCGAGGCACACAAGCCCGAGCTACGGGC...CCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
CDS-3UTR CAA 90 bp CAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGAGGACACGACGATGTaGATGGGCGAGCTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: QNRKKCLVVCMHMHCSRSEDTTM*MGELVL
Trigger: CAGCACCAGCTCGCCCATCAACATCGTCGTGTCCTC...GCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CAA 90 bp CTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGAAGCCGTTCAGCATCCTTGCCATaGGCCTCGCCACAGAGTAGC +
Preference number: 5 (lower is better)
Translates to: LKPRVTTDEESKQSVRSRSASLP*ASPQSS
Trigger: GCTACTCTGTGGCGAGGCCAATGGCAAGGATGCTGA...ACGGCTTCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp CCTCCCATCAACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACAGCTCACGTCAGCATCCTTGCCATaGGCCTCGCCACAGAGTAGC +
Preference number: 5 (lower is better)
Translates to: PPINHVQYKALLVTLQLTSASLP*ASPQSS
Trigger: GCTACTCTGTGGCGAGGCCAATGGCAAGGATGCTGA...CGTGAGCTGTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTTGATGGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp CTATTCTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGCCCGAATGCTTTTTCTTCTTCTTCTaGCCCCAGCACCCAGAGCTC +
Preference number: 5 (lower is better)
Translates to: LFCVLCLTITLTPHRPECFFFFF*PQHPEL
Trigger: GAGCTCTGGGTGCTGGGGCAAGAAGAAGAAGAAAAA...GCATTCGGGCCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAGAATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCGCATCTGGATCCCTTTaGGTGGTTCAGCACAGTCTG +
Preference number: 5 (lower is better)
Translates to: KEMSCGMHAHALFPERLCASGSL*VVQHSL
Trigger: CAGACTGTGCTGAACCACCAAAAGGGATCCAGATGC...GCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp TGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCTAGAGTCACAACGGATGAACCAGCGTGTCTGGATTaGAGCACTCAGAGAGCAGTG +
Preference number: 5 (lower is better)
Translates to: CCTEEPQCNLKPRVTTDEPACLD*STQRAV
Trigger: CACTGCTCTCTGAGTGCTCAAATCCAGACACGCTGG...TTCATCCGTTGTGACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCCACACCACACGGTCATaGTCTATTCGGAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: NRKKCLVVCMHMHCSRSAHTTRS*SIRSSS
Trigger: GGAGCTGCTCCGAATAGACAATGACCGTGTGGTGTG...GGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTTCTCGCATGGCGTATTaGCCGATGAGCTCCTTATTT +
Preference number: 5 (lower is better)
Translates to: EMSCGMHAHALFPERLCPSRMAY*PMSSLF
Trigger: AAATAAGGAGCTCATCGGCAAATACGCCATGCGAGA...AGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCGACATGGCCTTGCTaGCAGTGTTGTTGCTGTTGT +
Preference number: 5 (lower is better)
Translates to: ERNVLWYACTCTVPGAPVPTWPC*QCCCCC
Trigger: ACAACAGCAACAACACTGCAAGCAAGGCCATGTCGG...CACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGAAGCCGTCCCCCACACAGTTCATCCGACATGGCCTaGCTTGCAGTGTTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: VTTDEESKQSVRSRPPHSSSDMA*LAVLLL
Trigger: CAGCAACAACACTGCAAGCAAGGCCATGTCGGATGA...ACTGTGTGGGGGACGGCTTCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp TACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTTAGGATCACTGCACTTGCTGAGCGGTaGTTGGGAGACACGCGCACA +
Preference number: 5 (lower is better)
Translates to: YSTAHARKVLPTVIFRITALAER*LGDTRT
Trigger: TGTGCGCGTGTCTCCCAACAACCGCTCAGCAAGTGC...AGTGATCCTAAATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp ACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTTGCACTTGCTGAGCGGTaGTTGGGAGACACGCGCACA +
Preference number: 5 (lower is better)
Translates to: TSRYSTAHARKVLPTVIFALAER*LGDTRT
Trigger: TGTGCGCGTGTCTCCCAACAACCGCTCAGCAAGTGC...AAATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTTGTGCTGAAACCTGGTaGTGTTTGATGTCTTCAGCG +
Preference number: 5 (lower is better)
Translates to: EMSCGMHAHALFPERLCPCAETW*CLMSSA
Trigger: CGCTGAAGACATCAAACACAACCAGGTTTCAGCACA...AGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp ACCGGCCCGAATGCCTCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGCACAAGGCAAGAAACATCTaGCTGTACAGAGGAACCCCA +
Preference number: 5 (lower is better)
Translates to: TGPNASSLLPSTTFSIKHKARNI*LYRGTP
Trigger: TGGGGTTCCTCTGTACAGCAAGATGTTTCTTGCCTT...GTGCTTTATACTGAACGTGGTTGATGGGAGGAGAGACGAGGCATTCGGGCCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGAAGGCAAGAAACATCTaGCTGTACAGAGGAACCCCA +
Preference number: 5 (lower is better)
Translates to: KCLVVCMHMHCSRSACALKARNI*LYRGTP
Trigger: TGGGGTTCCTCTGTACAGCAAGATGTTTCTTGCCTT...CAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GAGGAAACACGGCGGCATTGGTGTAATATACACAACGCGCTTTTCTTCTTTAATGTCTCGGATCCGAGCTaGCATCGCTCCAGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: EETRRHWCNIHNALFFFNVSDPS*HRSSWL
Trigger: CAGCCAGCTGGAGCGATGCAAGCTCGGATCCGAGAC...ATTAAAGAAGAAAAGCGCGTTGTGTATATTACACCAATGCCGCCGTGTTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000513588.5
CDS-3UTR CAA 90 bp AACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCAGAGCAGGGCCGGATTaGCTGTATGGAGACTCAACA +
Preference number: 5 (lower is better)
Translates to: NRKKCLVVCMHMHCSRSARAGPD*LYGDST
Trigger: TGTTGAGTCTCCATACAGCAAATCCGGCCCTGCTCT...GGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTCCAAAACAGAGGTGTaGCAAGTAGGCTGCCGCGTT +
Preference number: 5 (lower is better)
Translates to: NRKKCLVVCMHMHCSRSASKTEV*QVGCRV
Trigger: AACGCGGCAGCCTACTTGCAACACCTCTGTTTTGGA...GGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GTTCACTGTAGGGACGGGCAGCTGAGTAGAAGTCAACGTAGTTGCCGGTGGACTATTTTGTTATCATCGTaGGCCTTCCCATACACCAGG +
Preference number: 5 (lower is better)
Translates to: VHCRDGQLSRSQRSCRWTILLSS*AFPYTR
Trigger: CCTGGTGTATGGGAAGGCCAACGATGATAACAAAAT...AGTCCACCGGCAACTACGTTGACTTCTACTCAGCTGCCCGTCCCTACAGTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCTCCAGGTCAGTCGTCTaGCGGAGTAACCTCACCAGT +
Preference number: 5 (lower is better)
Translates to: KQKEMSCGMHAHALFPERSRSVV*RSNLTS
Trigger: ACTGGTGAGGTTACTCCGCAAGACGACTGACCTGGA...GCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp CAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCTCAGCATCCTTGCCATaGGCCTCGCCACAGAGTAGC +
Preference number: 5 (lower is better)
Translates to: QNRKKCLVVCMHMHCSRSSASLP*ASPQSS
Trigger: GCTACTCTGTGGCGAGGCCAATGGCAAGGATGCTGA...GCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp ACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGGAGCTCTCAGCATCCTaGCCATTGGCCTCGCCACAG +
Preference number: 5 (lower is better)
Translates to: TKQKEMSCGMHAHALFPEELSAS*PLASPQ
Trigger: CTGTGGCGAGGCCAATGGCAAGGATGCTGAGAGCTC...CTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCACACCACACGGTCATaGTCTATTCGGAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: KQKEMSCGMHAHALFPERHTTRS*SIRSSS
Trigger: GGAGCTGCTCCGAATAGACAATGACCGTGTGGTGTG...GCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp TGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCTAGAGTCACAACGGATGAAGCCTTGCTTGCAGTGTaGTTGCTGTTGTTCCCTCCT +
Preference number: 5 (lower is better)
Translates to: CCTEEPQCNLKPRVTTDEALLAV*LLLFPP
Trigger: AGGAGGGAACAACAGCAACAACACTGCAAGCAAGGC...TTCATCCGTTGTGACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GCCGTCCCCCACACAGTGTGTAAACTATTCTGTGTCTTGTGCTTAACGATAACCGCATCCCGTAAGGCCTaGGCGTTCTCCATGTTCTTG +
Preference number: 5 (lower is better)
Translates to: AVPHTVCKLFCVLCLTITASRKA*AFSMFL
Trigger: CAAGAACATGGAGAACGCCAAGGCCTTACGGGATGC...GGTTATCGTTAAGCACAAGACACAGAATAGTTTACACACTGTGTGGGGGACGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GCACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATGAAACCTGGTTGTGTTaGATGTCTTCAGCGGGCGCA +
Preference number: 5 (lower is better)
Translates to: ALLVTLQLTLERCCPLSYETWLC*MSSAGA
Trigger: TGCGCCCGCTGAAGACATCAAACACAACCAGGTTTC...ATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GCCGTCCCCCACACAGTGTGTAAACTATTCTGTGTCTTGTGCTTAACGATAACCGAGCTGGATGCCTCCTaGTCTCCTTATCTCGGCTTT +
Preference number: 5 (lower is better)
Translates to: AVPHTVCKLFCVLCLTITELDAS*SPYLGF
Trigger: AAAGCCGAGATAAGGAGACAAGGAGGCATCCAGCTC...GGTTATCGTTAAGCACAAGACACAGAATAGTTTACACACTGTGTGGGGGACGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCAGTTTTCAACGGTCTaGCTATCGATCTCACTGCTC +
Preference number: 5 (lower is better)
Translates to: ERNVLWYACTCTVPGAPVQFSTV*LSISLL
Trigger: GAGCAGTGAGATCGATAGCAAGACCGTTGAAAACTG...CACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTGCTCCATCCCACTGATCTaGGGATTTCTTTTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: NVLWYACTCTVPGAPVPCSIPLI*GFLFLL
Trigger: AAGAAGAAAAAGAAATCCCAAGATCAGTGGGATGGA...GCAGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp TCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACCACACCACACGGTCATaGTCTATTCGGAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SSLLPSTTFSIKHFSLLYHTTRS*SIRSSS
Trigger: GGAGCTGCTCCGAATAGACAATGACCGTGTGGTGTG...GTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTTGATGGGAGGAGAGACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCGCCTTGCTTGCAGTGTaGTTGCTGTTGTTCCCTCCT +
Preference number: 5 (lower is better)
Translates to: KQKEMSCGMHAHALFPERALLAV*LLLFPP
Trigger: AGGAGGGAACAACAGCAACAACACTGCAAGCAAGGC...GCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp CAAAAGGCAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCCCGACATGGCCTTGCTaGCAGTGTTGTTGCTGTTGT +
Preference number: 5 (lower is better)
Translates to: QKARNILLYRGTPMQPEAPTWPC*QCCCCC
Trigger: ACAACAGCAACAACACTGCAAGCAAGGCCATGTCGG...GGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTGCCTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GCCGTCCCCCACACAGTGTGTAAACTATTCTGTGTCTTGTGCTTAACGATAACCTCATCCGACATGGCCTaGCTTGCAGTGTTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: AVPHTVCKLFCVLCLTITSSDMA*LAVLLL
Trigger: CAGCAACAACACTGCAAGCAAGGCCATGTCGGATGA...GGTTATCGTTAAGCACAAGACACAGAATAGTTTACACACTGTGTGGGGGACGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGAAGCCGTCCCCCACACAGTGAGTGTTTATCTCCTTaGCTTTTGGAGATGCCGACC +
Preference number: 5 (lower is better)
Translates to: VTTDEESKQSVRSRPPHSECLSP*LLEMPT
Trigger: GGTCGGCATCTCCAAAAGCAAAGGAGATAAACACTC...ACTGTGTGGGGGACGGCTTCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GTGTGTAAACTATTCTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGGGTCCCTCTCGATGGTaGAAGACGAGGCTACAAAGT +
Preference number: 5 (lower is better)
Translates to: VCKLFCVLCLTITLTPHRGPSRW*KTRLQS
Trigger: ACTTTGTAGCCTCGTCTTCAACCATCGAGAGGGACC...CCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAGAATAGTTTACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCGGTCCCTCTCGATGGTaGAAGACGAGGCTACAAAGT +
Preference number: 5 (lower is better)
Translates to: KQKEMSCGMHAHALFPERGPSRW*KTRLQS
Trigger: ACTTTGTAGCCTCGTCTTCAACCATCGAGAGGGACC...GCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCGAAACCTGGTTGTGTTaGATGTCTTCAGCGGGCGCA +
Preference number: 5 (lower is better)
Translates to: KQKEMSCGMHAHALFPERETWLC*MSSAGA
Trigger: TGCGCCCGCTGAAGACATCAAACACAACCAGGTTTC...GCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp CTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGAAGCCGTGAAACCTGGTTGTGTTaGATGTCTTCAGCGGGCGCA +
Preference number: 5 (lower is better)
Translates to: LKPRVTTDEESKQSVRSRETWLC*MSSAGA
Trigger: TGCGCCCGCTGAAGACATCAAACACAACCAGGTTTC...ACGGCTTCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp TCACACCCAGGAGTCGGGGGAGGCCGGGTAGTGGCTCGTTTCATAGTTCAGTTCACTCATCGTAATTTCTaGTGGAATTCTGAAATGGCT +
Preference number: 5 (lower is better)
Translates to: SHPGVGGGRVVARFIVQFTHRNF*WNSEMA
Trigger: AGCCATTTCAGAATTCCACAAGAAATTACGATGAGT...GAACTGAACTATGAAACGAGCCACTACCCGGCCTCCCCCGACTCCTGGGTGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS TCA 90 bp TTCCCGAGACTTCAGGTTGAAACAACAGATGTAGAGGTAGGGAGGTaGAGTGTTTTCCTTCTGCTTCTCATGCTGCTCATGCTGCCAGTC +
Preference number: 5 (lower is better)
Translates to: FPRLQVETTDVEVGR*SVFLLLLMLLMLPV
Trigger: GACTGGCAGCATGAGCAGCATGAGAAGCAGAAGGAAAACACTTCACCTCCCTACCTCTACATCTGTTGTTTCAACCTGAAGTCTCGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509868.1
CDS GCA 90 bp AAAGCAGCTTCGCTTTCAGCCATTAATTACGGATCACCCCAATTTTaGATCGCTCATCTCCCATACACACGCACAGCCTTCCAAACCTGG +
Preference number: 5 (lower is better)
Translates to: KAASLSAINYGSPQF*IAHLPYTRTAFQTW
Trigger: CCAGGTTTGGAAGGCTGTGCGTGTGTATGGGAGATGAGCGATGCAAAATTGGGGTGATCCGTAATTAATGGCTGAAAGCGAAGCTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511278.5
CDS-3UTR CAA 90 bp TTTTCTGTGGATACTTCAAGTAATTGGCCCCAAAGTGAAACTGAATTGGCCATGTCAGAGCCATCCCCGTaGGAGGTGTTTAAGCCGGGG +
Preference number: 5 (lower is better)
Translates to: FSVDTSSNWPQSETELAMSEPSP*EVFKPG
Trigger: CCCCGGCTTAAACACCTCCAACGGGGATGGCTCTGA...CATGGCCAATTCAGTTTCACTTTGGGGCCAATTACTTGAAGTATCCACAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304623.13
CDS-3UTR CAA 90 bp AACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTAATTCCTGTTCTTaGACTGAGGCGAGGATGGCA +
Preference number: 5 (lower is better)
Translates to: NRKKCLVVCMHMHCSRSACNSCS*TEARMA
Trigger: TGCCATCCTCGCCTCAGTCAAAGAACAGGAATTACA...GGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GGATGCCACCACAGTTTTTCAGGGCAATTTTGTTATCATCGTTGGCCTTCCCATAGAGCAGGGCCGGATTaGCTGTATGGAGACTCAACA +
Preference number: 5 (lower is better)
Translates to: GCHHSFSGQFCYHRWPSHRAGPD*LYGDST
Trigger: TGTTGAGTCTCCATACAGCAAATCCGGCCCTGCTCT...ATGGGAAGGCCAACGATGATAACAAAATTGCCCTGAAAAACTGTGGTGGCATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR CAA 90 bp ACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTTTCCAAAACAGAGGTGTaGCAAGTAGGCTGCCGCGTT +
Preference number: 5 (lower is better)
Translates to: TSRYSTAHARKVLPTVIFSKTEV*QVGCRV
Trigger: AACGCGGCAGCCTACTTGCAACACCTCTGTTTTGGA...AAATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTTCGGCTTTAATTTTGTaGTCTCCAAAACAGAGGTGT +
Preference number: 5 (lower is better)
Translates to: EMSCGMHAHALFPERLCPSALIL*SPKQRC
Trigger: ACACCTCTGTTTTGGAGACAACAAAATTAAAGCCGA...AGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp TACTCTACAGCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTTAGGATCACTGAGCTGGATGCCTCCTaGTCTCCTTATCTCGGCTTT +
Preference number: 5 (lower is better)
Translates to: YSTAHARKVLPTVIFRITELDAS*SPYLGF
Trigger: AAAGCCGAGATAAGGAGACAAGGAGGCATCCAGCTC...AGTGATCCTAAATATGACAGTGGGCAGCACCTTTCTAGCGTGAGCTGTAGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGATTTTGTTATCATCGTaGGCCTTCCCATACACCAGG +
Preference number: 5 (lower is better)
Translates to: ERNVLWYACTCTVPGAPVILLSS*AFPYTR
Trigger: CCTGGTGTATGGGAAGGCCAACGATGATAACAAAAT...CACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp ACCGGCCCGAATGCCTCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGCACTTTTTCAGGGCAATTTaGTTATCATCGTTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: TGPNASSLLPSTTFSIKHFFRAI*LSSLAF
Trigger: GAAGGCCAACGATGATAACAAAATTGCCCTGAAAAA...GTGCTTTATACTGAACGTGGTTGATGGGAGGAGAGACGAGGCATTCGGGCCGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCCCTTCCATCCCACTGATCTaGGGATTTCTTTTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: EMSCGMHAHALFPERLCPSIPLI*GFLFLL
Trigger: AAGAAGAAAAAGAAATCCCAAGATCAGTGGGATGGA...AGGGCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp ACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCCAGCGTGTCTGGATTaGAGCACTCAGAGAGCAGTG +
Preference number: 5 (lower is better)
Translates to: TKQKEMSCGMHAHALFPEPACLD*STQRAV
Trigger: CACTGCTCTCTGAGTGCTCAAATCCAGACACGCTGG...CTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTCTCGCATGGCGTATTaGCCGATGAGCTCCTTATTT +
Preference number: 5 (lower is better)
Translates to: NRKKCLVVCMHMHCSRSASRMAY*PMSSLF
Trigger: AAATAAGGAGCTCATCGGCAAATACGCCATGCGAGA...GGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp TGCAACCTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGATCATCCGACATGGCCTaGCTTGCAGTGTTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: CNLKPRVTTDEESKQSVRSSDMA*LAVLLL
Trigger: CAGCAACAACACTGCAAGCAAGGCCATGTCGGATGA...TCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAGGTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp ACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGGCATCCCGTAAGGCCTaGGCGTTCTCCATGTTCTTG +
Preference number: 5 (lower is better)
Translates to: TKQKEMSCGMHAHALFPEASRKA*AFSMFL
Trigger: CAAGAACATGGAGAACGCCAAGGCCTTACGGGATGC...CTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCTTATCTCCTTTGCTTTaGGAGATGCCGACCAACTTC +
Preference number: 5 (lower is better)
Translates to: KEMSCGMHAHALFPERLCLSPLL*EMPTNF
Trigger: GAAGTTGGTCGGCATCTCCAAAAGCAAAGGAGATAA...GCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp TACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATTTGCAGCTTGCTGAGCGGTTGTaGGGAGACACGCGCACAGGG +
Preference number: 5 (lower is better)
Translates to: YWLSQPSYGTGFNKLNLQLAERL*GDTRTG
Trigger: CCCTGTGCGCGTGTCTCCCAACAACCGCTCAGCAAG...CTGCAAATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp CTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACCTTGCTGAGCGGTTGTaGGGAGACACGCGCACAGGG +
Preference number: 5 (lower is better)
Translates to: LLIFPYWLSQPSYGTGFNLAERL*GDTRTG
Trigger: CCCTGTGCGCGTGTCTCCCAACAACCGCTCAGCAAG...GTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp CAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGAAACCTGGTTGTGTTaGATGTCTTCAGCGGGCGCA +
Preference number: 5 (lower is better)
Translates to: QNRKKCLVVCMHMHCSRSETWLC*MSSAGA
Trigger: TGCGCCCGCTGAAGACATCAAACACAACCAGGTTTC...GCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp TGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCTAGAGTCACAACGGATGAAATTGGCCTCAGCCACTaGCATCTAAAGAGCAAAGCT +
Preference number: 5 (lower is better)
Translates to: CCTEEPQCNLKPRVTTDEIGLSH*HLKSKA
Trigger: AGCTTTGCTCTTTAGATGCAAGTGGCTGAGGCCAAT...TTCATCCGTTGTGACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304623.13
CDS-3UTR CAA 90 bp TTTTCTGTGGATACTTCAAGTAATTGGCCCCAAAGTGAAACTGAATTGGCCATGGGCAAGGTCCTGACCTaGCCCAACTGCAGCATCTTC +
Preference number: 5 (lower is better)
Translates to: FSVDTSSNWPQSETELAMGKVLT*PNCSIF
Trigger: GAAGATGCTGCAGTTGGGCAAGGTCAGGACCTTGCC...CATGGCCAATTCAGTTTCACTTTGGGGCCAATTACTTGAAGTATCCACAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304623.13
CDS-3UTR CAA 90 bp ACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGTCCAAAACAGAGGTGTaGCAAGTAGGCTGCCGCGTT +
Preference number: 5 (lower is better)
Translates to: TKQKEMSCGMHAHALFPESKTEV*QVGCRV
Trigger: AACGCGGCAGCCTACTTGCAACACCTCTGTTTTGGA...CTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp TCTGTGGATACTTCAAGTAATTGGCCCCAAAGTGAAACTGAATTGGCCATGGTTTCCAGGTCAGTCGTCTaGCGGAGTAACCTCACCAGT +
Preference number: 5 (lower is better)
Translates to: SVDTSSNWPQSETELAMVSRSVV*RSNLTS
Trigger: ACTGGTGAGGTTACTCCGCAAGACGACTGACCTGGA...AACCATGGCCAATTCAGTTTCACTTTGGGGCCAATTACTTGAAGTATCCACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304623.13
CDS-3UTR CAA 90 bp CTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGAAGCCGTCAGTTTTCAACGGTCTaGCTATCGATCTCACTGCTC +
Preference number: 5 (lower is better)
Translates to: LKPRVTTDEESKQSVRSRQFSTV*LSISLL
Trigger: GAGCAGTGAGATCGATAGCAAGACCGTTGAAAACTG...ACGGCTTCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GAGGAAACACGGCGGCATTGGTGTAATATACACAACGCGCTTTTCTTCTTTAATGCATCCCGTAAGGCCTaGGCGTTCTCCATGTTCTTG +
Preference number: 5 (lower is better)
Translates to: EETRRHWCNIHNALFFFNASRKA*AFSMFL
Trigger: CAAGAACATGGAGAACGCCAAGGCCTTACGGGATGC...ATTAAAGAAGAAAAGCGCGTTGTGTATATTACACCAATGCCGCCGTGTTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000513588.5
CDS-3UTR CAA 90 bp TGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCTAGAGTCACAACGGATGAATTATCTCCTTTGCTTTaGGAGATGCCGACCAACTTC +
Preference number: 5 (lower is better)
Translates to: CCTEEPQCNLKPRVTTDELSPLL*EMPTNF
Trigger: GAAGTTGGTCGGCATCTCCAAAAGCAAAGGAGATAA...TTCATCCGTTGTGACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp TTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATCTTGCTGAGCGGTTGTaGGGAGACACGCGCACAGGG +
Preference number: 5 (lower is better)
Translates to: FPYWLSQPSYGTGFNKLNLAERL*GDTRTG
Trigger: CCCTGTGCGCGTGTCTCCCAACAACCGCTCAGCAAG...ATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp TACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATTTGCAGGCACTTGCTGAGCGGTaGTTGGGAGACACGCGCACA +
Preference number: 5 (lower is better)
Translates to: YWLSQPSYGTGFNKLNLQALAER*LGDTRT
Trigger: TGTGCGCGTGTCTCCCAACAACCGCTCAGCAAGTGC...CTGCAAATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GCCGTCCCCCACACAGTGTGTAAACTATTCTGTGTCTTGTGCTTAACGATAACCAAGGCAAGAAACATCTaGCTGTACAGAGGAACCCCA +
Preference number: 5 (lower is better)
Translates to: AVPHTVCKLFCVLCLTITKARNI*LYRGTP
Trigger: TGGGGTTCCTCTGTACAGCAAGATGTTTCTTGCCTT...GGTTATCGTTAAGCACAAGACACAGAATAGTTTACACACTGTGTGGGGGACGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GGCCTCAGCCACTTGCATCTAAAGAGCAAAGCTAGTTTACCCGCGGCCCATGTTCAAAGTGAAACTGAATaGGCCATGGTTTATCGTGTT +
Preference number: 5 (lower is better)
Translates to: GLSHLHLKSKASLPAAHVQSETE*AMVYRV
Trigger: AACACGATAAACCATGGCCAATTCAGTTTCACTTTG...AACATGGGCCGCGGGTAAACTAGCTTTGCTCTTTAGATGCAAGTGGCTGAGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304623.13
CDS-3UTR CAA 90 bp TCTAAAATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGCTCCTGCGAGTGCTaGCTGTACTGCTCGGACGCG +
Preference number: 5 (lower is better)
Translates to: SKIALNISLLVITAFLWNSSCEC*LYCSDA
Trigger: CGCGTCCGAGCAGTACAGCAAGCACTCGCAGGAGCT...GTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTATTTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS-3UTR CAA 90 bp GAGGAAACACGGCGGCATTGGTGTAATATACACAACGCGCTTTTCTTCTTTAATAGAGCAGGGCCGGATTaGCTGTATGGAGACTCAACA +
Preference number: 5 (lower is better)
Translates to: EETRRHWCNIHNALFFFNRAGPD*LYGDST
Trigger: TGTTGAGTCTCCATACAGCAAATCCGGCCCTGCTCT...ATTAAAGAAGAAAAGCGCGTTGTGTATATTACACCAATGCCGCCGTGTTTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000513588.5
CDS-3UTR CAA 90 bp CTCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACAGTTTTCAACGGTCTaGCTATCGATCTCACTGCTC +
Preference number: 5 (lower is better)
Translates to: LVSPPINHVQYKALLVTLQFSTV*LSISLL
Trigger: GAGCAGTGAGATCGATAGCAAGACCGTTGAAAACTG...TAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTTGATGGGAGGAGAGACGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp TACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATTTGCAGTCAGCATCCTTGCCATaGGCCTCGCCACAGAGTAGC +
Preference number: 5 (lower is better)
Translates to: YWLSQPSYGTGFNKLNLQSASLP*ASPQSS
Trigger: GCTACTCTGTGGCGAGGCCAATGGCAAGGATGCTGA...CTGCAAATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp TTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATGAGCTCTCAGCATCCTaGCCATTGGCCTCGCCACAG +
Preference number: 5 (lower is better)
Translates to: FPYWLSQPSYGTGFNKLNELSAS*PLASPQ
Trigger: CTGTGGCGAGGCCAATGGCAAGGATGCTGAGAGCTC...ATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AACAAAAGGCAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGTTTTTCTTCTTCTTCTaGCCCCAGCACCCAGAGCTC +
Preference number: 5 (lower is better)
Translates to: NKRQETSCCTEEPQCNLKFFFFF*PQHPEL
Trigger: GAGCTCTGGGTGCTGGGGCAAGAAGAAGAAGAAAAA...CTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTGCCTTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp ACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGTTTTTCTTCTTCTTCTaGCCCCAGCACCCAGAGCTC +
Preference number: 5 (lower is better)
Translates to: TKQKEMSCGMHAHALFPEFFFFF*PQHPEL
Trigger: GAGCTCTGGGTGCTGGGGCAAGAAGAAGAAGAAAAA...CTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GAAGGACTCATCGTAATTTCTTGTGGAATTCTGAAATGGCTGGTAGGTCTCGTAGCATCTGGATCCCTTTaGGTGGTTCAGCACAGTCTG +
Preference number: 5 (lower is better)
Translates to: EGLIVISCGILKWLVGLVASGSL*VVQHSL
Trigger: CAGACTGTGCTGAACCACCAAAAGGGATCCAGATGC...TACGAGACCTACCAGCCATTTCAGAATTCCACAAGAAATTACGATGAGTCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CAA 90 bp TCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACTCTCGCATGGCGTATTaGCCGATGAGCTCCTTATTT +
Preference number: 5 (lower is better)
Translates to: SSLLPSTTFSIKHFSLLYSRMAY*PMSSLF
Trigger: AAATAAGGAGCTCATCGGCAAATACGCCATGCGAGA...GTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTTGATGGGAGGAGAGACGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCCTTGCTTGCAGTGTaGTTGCTGTTGTTCCCTCCT +
Preference number: 5 (lower is better)
Translates to: NKTERNVLWYACTCTVPGALLAV*LLLFPP
Trigger: AGGAGGGAACAACAGCAACAACACTGCAAGCAAGGC...TCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GCTCACGCTAGAAAGGTGCTGCCCACTGTCATATTTAGGATCACTTTAGCTTTCGCGTTCTCCATGTTCTaGGTAATCACTTCGTGCAGT +
Preference number: 5 (lower is better)
Translates to: AHARKVLPTVIFRITLAFAFSMF*VITSCS
Trigger: ACTGCACGAAGTGATTACCAAGAACATGGAGAACGC...GAAAGCTAAAGTGATCCTAAATATGACAGTGGGCAGCACCTTTCTAGCGTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GTGTGTAAACTATTCTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGTTATCTCCTTTGCTTTaGGAGATGCCGACCAACTTC +
Preference number: 5 (lower is better)
Translates to: VCKLFCVLCLTITLTPHRLSPLL*EMPTNF
Trigger: GAAGTTGGTCGGCATCTCCAAAAGCAAAGGAGATAA...CCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAGAATAGTTTACACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp CCTCCCATCAACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACAGCTCACGTTATCTCCTTTGCTTTaGGAGATGCCGACCAACTTC +
Preference number: 5 (lower is better)
Translates to: PPINHVQYKALLVTLQLTLSPLL*EMPTNF
Trigger: GAAGTTGGTCGGCATCTCCAAAAGCAAAGGAGATAA...CGTGAGCTGTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTTGATGGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp TCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACGAGTGTTTATCTCCTTaGCTTTTGGAGATGCCGACC +
Preference number: 5 (lower is better)
Translates to: SSLLPSTTFSIKHFSLLYECLSP*LLEMPT
Trigger: GGTCGGCATCTCCAAAAGCAAAGGAGATAAACACTC...GTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTTGATGGGAGGAGAGACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GAGGAAACACGGCGGCATTGGTGTAATATACACAACGCGCTTTTCTTCTTTAATGGTCCCTCTCGATGGTaGAAGACGAGGCTACAAAGT +
Preference number: 5 (lower is better)
Translates to: EETRRHWCNIHNALFFFNGPSRW*KTRLQS
Trigger: ACTTTGTAGCCTCGTCTTCAACCATCGAGAGGGACC...ATTAAAGAAGAAAAGCGCGTTGTGTATATTACACCAATGCCGCCGTGTTTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000513588.5
CDS-3UTR CAA 90 bp TGCAACCTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCGTGAGATGTGCTGAAACCTGGTaGTGTTTGATGTCTTCAGCG +
Preference number: 5 (lower is better)
Translates to: CNLKPRVTTDEESKQSVRCAETW*CLMSSA
Trigger: CGCTGAAGACATCAAACACAACCAGGTTTCAGCACA...TCTCACGCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAGGTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTCGGCTTTAATTTTGTaGTCTCCAAAACAGAGGTGT +
Preference number: 5 (lower is better)
Translates to: NRKKCLVVCMHMHCSRSASALIL*SPKQRC
Trigger: ACACCTCTGTTTTGGAGACAACAAAATTAAAGCCGA...GGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp TGCTGTACAGAGGAACCCCAATGCAACCTGAAGCCTAGAGTCACAACGGATGAATCGGCTTTAATTTTGTaGTCTCCAAAACAGAGGTGT +
Preference number: 5 (lower is better)
Translates to: CCTEEPQCNLKPRVTTDESALIL*SPKQRC
Trigger: ACACCTCTGTTTTGGAGACAACAAAATTAAAGCCGA...TTCATCCGTTGTGACTCTAGGCTTCAGGTTGCATTGGGGTTCCTCTGTACAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp CACGGCGGCATTGGTGTAATATACACAACGCGCTTTTCTTCTTTAATCTGTAATGAGCTGGATGCCTCCTaGTCTCCTTATCTCGGCTTT +
Preference number: 5 (lower is better)
Translates to: HGGIGVIYTTRFSSLICNELDAS*SPYLGF
Trigger: AAAGCCGAGATAAGGAGACAAGGAGGCATCCAGCTC...ATTACAGATTAAAGAAGAAAAGCGCGTTGTGTATATTACACCAATGCCGCCGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000513588.5
CDS-3UTR CAA 90 bp CTCGTCTCTCCTCCCATCAACCACGTTCAGTATAAAGCACTTCTCGTTACTCTAATTTTGTTATCATCGTaGGCCTTCCCATACACCAGG +
Preference number: 5 (lower is better)
Translates to: LVSPPINHVQYKALLVTLILLSS*AFPYTR
Trigger: CCTGGTGTATGGGAAGGCCAACGATGATAACAAAAT...TAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTTGATGGGAGGAGAGACGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp CTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACGGGATAATCACCGCGTaGGTCAGTACTGCTAGGGCA +
Preference number: 5 (lower is better)
Translates to: LLIFPYWLSQPSYGTGFNGIITA*VSTARA
Trigger: TGCCCTAGCAGTACTGACCAACGCGGTGATTATCCC...GTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AACAAAAGGCAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGCAGTTTTCAACGGTCTaGCTATCGATCTCACTGCTC +
Preference number: 5 (lower is better)
Translates to: NKRQETSCCTEEPQCNLKQFSTV*LSISLL
Trigger: GAGCAGTGAGATCGATAGCAAGACCGTTGAAAACTG...CTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTGCCTTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp ACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCAGTTTTCAACGGTCTaGCTATCGATCTCACTGCTC +
Preference number: 5 (lower is better)
Translates to: TKQKEMSCGMHAHALFPEQFSTV*LSISLL
Trigger: GAGCAGTGAGATCGATAGCAAGACCGTTGAAAACTG...CTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AACAAAAGGCAAGAAACATCTTGCTGTACAGAGGAACCCCAATGCAACCTGAAGTCTCGCATGGCGTATTaGCCGATGAGCTCCTTATTT +
Preference number: 5 (lower is better)
Translates to: NKRQETSCCTEEPQCNLKSRMAY*PMSSLF
Trigger: AAATAAGGAGCTCATCGGCAAATACGCCATGCGAGA...CTTCAGGTTGCATTGGGGTTCCTCTGTACAGCAAGATGTTTCTTGCCTTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp CTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACGCATCCCGTAAGGCCTaGGCGTTCTCCATGTTCTTG +
Preference number: 5 (lower is better)
Translates to: LLIFPYWLSQPSYGTGFNASRKA*AFSMFL
Trigger: CAAGAACATGGAGAACGCCAAGGCCTTACGGGATGC...GTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AGAGCAAAGCTAGTTTACCCGCGGCCCATGTTCTTTTCGATGGTTAGCCTTATTTTATCTCCTTTGCTTTaGGAGATGCCGACCAACTTC +
Preference number: 5 (lower is better)
Translates to: RAKLVYPRPMFFSMVSLILSPLL*EMPTNF
Trigger: GAAGTTGGTCGGCATCTCCAAAAGCAAAGGAGATAA...AATAAGGCTAACCATCGAAAAGAACATGGGCCGCGGGTAAACTAGCTTTGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304623.13
CDS-3UTR CAA 90 bp AAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCTGTGCACTCATCGTAATTTCTaGTGGAATTCTGAAATGGCT +
Preference number: 5 (lower is better)
Translates to: KEMSCGMHAHALFPERLCTHRNF*WNSEMA
Trigger: AGCCATTTCAGAATTCCACAAGAAATTACGATGAGT...GCACAGGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGAAGGCAAGAAACATCTaGCTGTACAGAGGAACCCCA +
Preference number: 5 (lower is better)
Translates to: NHVQYKALLVTLQLTLERKARNI*LYRGTP
Trigger: TGGGGTTCCTCTGTACAGCAAGATGTTTCTTGCCTT...CCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp TCTGTGGATACTTCAAGTAATTGGCCCCAAAGTGAAACTGAATTGGCCATGGTTTTTACTAGGCACCTATaGGCCTCAGCCACTTGCATC +
Preference number: 5 (lower is better)
Translates to: SVDTSSNWPQSETELAMVFTRHL*ASATCI
Trigger: GATGCAAGTGGCTGAGGCCAATAGGTGCCTAGTAAA...AACCATGGCCAATTCAGTTTCACTTTGGGGCCAATTACTTGAAGTATCCACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000304623.13
CDS-3UTR CAA 90 bp ATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTGAGCTGGATGCCTCCTaGTCTCCTTATCTCGGCTTT +
Preference number: 5 (lower is better)
Translates to: IALNISLLVITAFLWNRLELDAS*SPYLGF
Trigger: AAAGCCGAGATAAGGAGACAAGGAGGCATCCAGCTC...AAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp TTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATTCCAGGTCAGTCGTCTaGCGGAGTAACCTCACCAGT +
Preference number: 5 (lower is better)
Translates to: FPYWLSQPSYGTGFNKLNSRSVV*RSNLTS
Trigger: ACTGGTGAGGTTACTCCGCAAGACGACTGACCTGGA...ATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp CCCCAATGCAACCTGAAGCCTAGAGTCACAACGGATGAAGAGAGTAAACAAAGCTCCATCCCACTGATCTaGGGATTTCTTTTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: PQCNLKPRVTTDEESKQSSIPLI*GFLFLL
Trigger: AAGAAGAAAAAGAAATCCCAAGATCAGTGGGATGGA...GCTTTGTTTACTCTCTTCATCCGTTGTGACTCTAGGCTTCAGGTTGCATTGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp CTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACGCATCTGGATCCCTTTaGGTGGTTCAGCACAGTCTG +
Preference number: 5 (lower is better)
Translates to: LLIFPYWLSQPSYGTGFNASGSL*VVQHSL
Trigger: CAGACTGTGCTGAACCACCAAAAGGGATCCAGATGC...GTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp TTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATCACACCACACGGTCATaGTCTATTCGGAGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: FPYWLSQPSYGTGFNKLNHTTRS*SIRSSS
Trigger: GGAGCTGCTCCGAATAGACAATGACCGTGTGGTGTG...ATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp ATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTCCGACATGGCCTTGCTaGCAGTGTTGTTGCTGTTGT +
Preference number: 5 (lower is better)
Translates to: IALNISLLVITAFLWNRLPTWPC*QCCCCC
Trigger: ACAACAGCAACAACACTGCAAGCAAGGCCATGTCGG...AAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp TACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATTTGCAGCCGACATGGCCTTGCTaGCAGTGTTGTTGCTGTTGT +
Preference number: 5 (lower is better)
Translates to: YWLSQPSYGTGFNKLNLQPTWPC*QCCCCC
Trigger: ACAACAGCAACAACACTGCAAGCAAGGCCATGTCGG...CTGCAAATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGTTCTCCATGTTCTaGGTAATCACTTCGTGCAGT +
Preference number: 5 (lower is better)
Translates to: NKTERNVLWYACTCTVPGAFSMF*VITSCS
Trigger: ACTGCACGAAGTGATTACCAAGAACATGGAGAACGC...TCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp ATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTGGTCCCTCTCGATGGTaGAAGACGAGGCTACAAAGT +
Preference number: 5 (lower is better)
Translates to: IALNISLLVITAFLWNRLGPSRW*KTRLQS
Trigger: ACTTTGTAGCCTCGTCTTCAACCATCGAGAGGGACC...AAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCGCCACTCATCGTAATTTCTaGTGGAATTCTGAAATGGCT +
Preference number: 5 (lower is better)
Translates to: NRKKCLVVCMHMHCSRSATHRNF*WNSEMA
Trigger: AGCCATTTCAGAATTCCACAAGAAATTACGATGAGT...GGCGCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp TTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATAGAGCAGGGCCGGATTaGCTGTATGGAGACTCAACA +
Preference number: 5 (lower is better)
Translates to: FPYWLSQPSYGTGFNKLNRAGPD*LYGDST
Trigger: TGTTGAGTCTCCATACAGCAAATCCGGCCCTGCTCT...ATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp TCTAAAATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACTCCAGGTCAGTCGTCTaGCGGAGTAACCTCACCAGT +
Preference number: 5 (lower is better)
Translates to: SKIALNISLLVITAFLWNSRSVV*RSNLTS
Trigger: ACTGGTGAGGTTACTCCGCAAGACGACTGACCTGGA...GTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTATTTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp TCCTATACAAAGTTGAAATTCCAGTGTTTTGAGCTGTCATGGCATCTTTCCTGGTCTCGCATGGCGTATTaGCCGATGAGCTCCTTATTT +
Preference number: 5 (lower is better)
Translates to: SYTKLKFQCFELSWHLSWSRMAY*PMSSLF
Trigger: AAATAAGGAGCTCATCGGCAAATACGCCATGCGAGA...CCAGGAAAGATGCCATGACAGCTCAAAACACTGGAATTTCAACTTTGTATAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS-3UTR CAA 90 bp TTTTCTGTGGATACTTCAAGTAATTGGCCCCAAAGTGAAACTGAATTGGCCATGTGTGCTGAAACCTGGTaGTGTTTGATGTCTTCAGCG +
Preference number: 5 (lower is better)
Translates to: FSVDTSSNWPQSETELAMCAETW*CLMSSA
Trigger: CGCTGAAGACATCAAACACAACCAGGTTTCAGCACA...CATGGCCAATTCAGTTTCACTTTGGGGCCAATTACTTGAAGTATCCACAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304623.13
CDS-3UTR CAA 90 bp GTGTGTAAACTATTCTGTGTCTTGTGCTTAACGATAACCCTTACGCCCCACCGGAAACTATTCTGTGTCTaGTGCTTAACGATAACCCTT +
Preference number: 5 (lower is better)
Translates to: VCKLFCVLCLTITLTPHRKLFCV*CLTITL
Trigger: AAGGGTTATCGTTAAGCACAAGACACAGAATAGTTT...CCGGTGGGGCGTAAGGGTTATCGTTAAGCACAAGACACAGAATAGTTTACACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AACCACGTTCAGTATAAAGCACTTCTCGTTACTCTACAGCTCACGCTAGAAAGGTTTTTCAGGGCAATTTaGTTATCATCGTTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: NHVQYKALLVTLQLTLERFFRAI*LSSLAF
Trigger: GAAGGCCAACGATGATAACAAAATTGCCCTGAAAAA...CCTTTCTAGCGTGAGCTGTAGAGTAACGAGAAGTGCTTTATACTGAACGTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp TCTAAAATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACGCATCTGGATCCCTTTaGGTGGTTCAGCACAGTCTG +
Preference number: 5 (lower is better)
Translates to: SKIALNISLLVITAFLWNASGSL*VVQHSL
Trigger: CAGACTGTGCTGAACCACCAAAAGGGATCCAGATGC...GTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTATTTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp TACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATTTGCAGTGTGCTGAAACCTGGTaGTGTTTGATGTCTTCAGCG +
Preference number: 5 (lower is better)
Translates to: YWLSQPSYGTGFNKLNLQCAETW*CLMSSA
Trigger: CGCTGAAGACATCAAACACAACCAGGTTTCAGCACA...CTGCAAATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp CAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGAGCACTCATCGTAATTTCTaGTGGAATTCTGAAATGGCT +
Preference number: 5 (lower is better)
Translates to: QNRKKCLVVCMHMHCSRSTHRNF*WNSEMA
Trigger: AGCCATTTCAGAATTCCACAAGAAATTACGATGAGT...GCTCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AGAGCAAAGCTAGTTTACCCGCGGCCCATGTTCTTTTCGATGGTTAGCCTTATTAAACTATTCTGTGTCTaGTGCTTAACGATAACCCTT +
Preference number: 5 (lower is better)
Translates to: RAKLVYPRPMFFSMVSLIKLFCV*CLTITL
Trigger: AAGGGTTATCGTTAAGCACAAGACACAGAATAGTTT...AATAAGGCTAACCATCGAAAAGAACATGGGCCGCGGGTAAACTAGCTTTGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304623.13
CDS-3UTR CAA 90 bp AAAATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGTGTAATTCCTGTTCTTaGACTGAGGCGAGGATGGCA +
Preference number: 5 (lower is better)
Translates to: KIALNISLLVITAFLWNRCNSCS*TEARMA
Trigger: TGCCATCCTCGCCTCAGTCAAAGAACAGGAATTACA...CCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGATTTTTCAGGGCAATTTaGTTATCATCGTTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: NKTERNVLWYACTCTVPGFFRAI*LSSLAF
Trigger: GAAGGCCAACGATGATAACAAAATTGCCCTGAAAAA...TCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp TCTAAAATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACTTTTTCTTCTTCTTCTaGCCCCAGCACCCAGAGCTC +
Preference number: 5 (lower is better)
Translates to: SKIALNISLLVITAFLWNFFFFF*PQHPEL
Trigger: GAGCTCTGGGTGCTGGGGCAAGAAGAAGAAGAAAAA...GTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTATTTTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp AACAAAACAGAAAGAAATGTCTTGTGGTATGCATGCACATGCACTGTTCCCGGATCCATCCCACTGATCTaGGGATTTCTTTTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: NKTERNVLWYACTCTVPGSIPLI*GFLFLL
Trigger: AAGAAGAAAAAGAAATCCCAAGATCAGTGGGATGGA...TCCGGGAACAGTGCATGTGCATGCATACCACAAGACATTTCTTTCTGTTTTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000503622.5
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp TTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATTTGCAGGAGAAATCTCGCATGGCGTATTaGCCGATGAGCTCCTTATTT +
Preference number: 5 (lower is better)
Translates to: LSQPSYGTGFNKLNLQEKSRMAY*PMSSLF
Trigger: AAATAAGGAGCTCATCGGCAAATACGCCATGCGAGA...TTTCTCCTGCAAATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GGCATTGGTGTAATATACACAACGCGCTTTTCTTCTTTAATCTGTAATGTACATCAGTTTTCAACGGTCTaGCTATCGATCTCACTGCTC +
Preference number: 5 (lower is better)
Translates to: GIGVIYTTRFSSLICNVHQFSTV*LSISLL
Trigger: GAGCAGTGAGATCGATAGCAAGACCGTTGAAAACTG...ATGTACATTACAGATTAAAGAAGAAAAGCGCGTTGTGTATATTACACCAATGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp TCTAAAATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACGCGTTCTCCATGTTCTaGGTAATCACTTCGTGCAGT +
Preference number: 5 (lower is better)
Translates to: SKIALNISLLVITAFLWNAFSMF*VITSCS
Trigger: ACTGCACGAAGTGATTACCAAGAACATGGAGAACGC...GTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTATTTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp TTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATTTATCTCCTTTGCTTTaGGAGATGCCGACCAACTTC +
Preference number: 5 (lower is better)
Translates to: FPYWLSQPSYGTGFNKLNLSPLL*EMPTNF
Trigger: GAAGTTGGTCGGCATCTCCAAAAGCAAAGGAGATAA...ATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GGCATTGGTGTAATATACACAACGCGCTTTTCTTCTTTAATCTGTAATGTACATTGTGCTGAAACCTGGTaGTGTTTGATGTCTTCAGCG +
Preference number: 5 (lower is better)
Translates to: GIGVIYTTRFSSLICNVHCAETW*CLMSSA
Trigger: CGCTGAAGACATCAAACACAACCAGGTTTCAGCACA...ATGTACATTACAGATTAAAGAAGAAAAGCGCGTTGTGTATATTACACCAATGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp TCTGTGGATACTTCAAGTAATTGGCCCCAAAGTGAAACTGAATTGGCCATGGTTAAACTGCTGAATGCCTaGTTTAGTTGTCACAAACAA +
Preference number: 5 (lower is better)
Translates to: SVDTSSNWPQSETELAMVKLLNA*FSCHKQ
Trigger: TTGTTTGTGACAACTAAACAAGGCATTCAGCAGTTT...AACCATGGCCAATTCAGTTTCACTTTGGGGCCAATTACTTGAAGTATCCACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304623.13
CDS-3UTR CAA 90 bp ATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTTTTTCAGGGCAATTTaGTTATCATCGTTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: IALNISLLVITAFLWNRLFFRAI*LSSLAF
Trigger: GAAGGCCAACGATGATAACAAAATTGCCCTGAAAAA...AAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTAT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp ATAGCTCTTAATATTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTCCATCCCACTGATCTaGGGATTTCTTTTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: IALNISLLVITAFLWNRLSIPLI*GFLFLL
Trigger: AAGAAGAAAAAGAAATCCCAAGATCAGTGGGATGGA...AAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAATATTAAGAGCTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp TTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATTTTTTCAGGGCAATTTaGTTATCATCGTTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: FPYWLSQPSYGTGFNKLNFFRAI*LSSLAF
Trigger: GAAGGCCAACGATGATAACAAAATTGCCCTGAAAAA...ATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp TTTCCTTACTGGTTATCACAGCCTTCCTATGGAACAGGCTTTAACAAACTAAATAAACTATTCTGTGTCTaGTGCTTAACGATAACCCTT +
Preference number: 5 (lower is better)
Translates to: FPYWLSQPSYGTGFNKLNKLFCV*CLTITL
Trigger: AAGGGTTATCGTTAAGCACAAGACACAGAATAGTTT...ATTTAGTTTGTTAAAGCCTGTTCCATAGGAAGGCTGTGATAACCAGTAAGGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000458100.6
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GGCATTGGTGTAATATACACAACGCGCTTTTCTTCTTTAATCTGTAATGTACATACTCATCGTAATTTCTaGTGGAATTCTGAAATGGCT +
Preference number: 5 (lower is better)
Translates to: GIGVIYTTRFSSLICNVHTHRNF*WNSEMA
Trigger: AGCCATTTCAGAATTCCACAAGAAATTACGATGAGT...ATGTACATTACAGATTAAAGAAGAAAAGCGCGTTGTGTATATTACACCAATGCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS-3UTR CAA 90 bp GGCATTGGTGTAATATACACAACGCGCTTTTCTTCTTTAATCTGTAATGTACATAAACTATTCTGTGTCTaGTGCTTAACGATAACCCTT +
Preference number: 5 (lower is better)
Translates to: GIGVIYTTRFSSLICNVHKLFCV*CLTITL
Trigger: AAGGGTTATCGTTAAGCACAAGACACAGAATAGTTT...ATGTACATTACAGATTAAAGAAGAAAAGCGCGTTGTGTATATTACACCAATGCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304623.13
ENST00000511377.5
ENST00000513588.5
CDS GCA 72 bp GCGCGCCCGGCTTCGCTTCTGCTCAAGCCGGGCTGCTaGTTCCGCGTCCCCGCCACGCGCCCAGGTGAGTCG +
Preference number: 6 (lower is better)
Translates to: ARPASLLLKPGC*FRVPATRPGES
Trigger: CGACTCACCTGGGCGCGTGGCGGGGACGCGGAAGCAGCAGCCCGGCTTGAGCAGAAGCGAAGCCGGGCGCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495388.6
CDS CCA 72 bp TGCTGTAGGACTTGGCCAGGCGGCTGGGCGACTGCTTaGGCGAGGAGCCGCGCGGCGCGGCGTAGGTGGCGC +
Preference number: 6 (lower is better)
Translates to: CCRTWPGGWATA*ARSRAARRRWR
Trigger: GCGCCACCTACGCCGCGCCGCGCGGCTCCTCGCCCAAGCAGTCGCCCAGCCGCCTGGCCAAGTCCTACAGCA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000511377.5
CDS TCA 72 bp GGGCTGCTGCTTCCGCGTCCCCGCCACGCGCCCAGGTaGGTCGCGCCAGGTGGCAGCGAGCCTTTACCTGCC +
Preference number: 6 (lower is better)
Translates to: GLLLPRPRHAPR*VAPGGSEPLPA
Trigger: GGCAGGTAAAGGCTCGCTGCCACCTGGCGCGACTCACCTGGGCGCGTGGCGGGGACGCGGAAGCAGCAGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495388.6
CDS GCA 72 bp ACAGCGCGCCCGGCTTCGCTTCTGCTCAAGCCGGGCTaGTGCTTCCGCGTCCCCGCCACGCGCCCAGGTGAG +
Preference number: 6 (lower is better)
Translates to: TARPASLLLKPG*CFRVPATRPGE
Trigger: CTCACCTGGGCGCGTGGCGGGGACGCGGAAGCAGCAGCCCGGCTTGAGCAGAAGCGAAGCCGGGCGCGCTGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495388.6
CDS GCA 72 bp CCAAAGGCGCGGCGCCCGGCGGCTTCCTCGCAAACATaGACCCTCCGCCGGCGACAGCTCCTCAGTCCGGGA +
Preference number: 6 (lower is better)
Translates to: PKARRPAASSQT*TLRRRQLLSPG
Trigger: TCCCGGACTGAGGAGCTGTCGCCGGCGGAGGGTGCATGTTTGCGAGGAAGCCGCCGGGCGCCGCGCCTTTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000509868.1
ENST00000513588.5
CDS GCA 72 bp CAGGTGAGTCGCGCCAGGTGGCAGCGAGCCTTTACCTaGCAGGCTGCCCGGCCTCTGGAGGGTGGCCGTGGC +
Preference number: 6 (lower is better)
Translates to: QVSRARWQRAFT*QAARPLEGGRG
Trigger: GCCACGGCCACCCTCCAGAGGCCGGGCAGCCTGGCAGGTAAAGGCTCGCTGCCACCTGGCGCGACTCACCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495388.6
CDS CCA 72 bp GGTGGATGGGCGAGGAGGAGATGGTGGACTGCACGGTaGGGGGCGAGGTCACGCGGATCGGGGACAGGCCGG +
Preference number: 6 (lower is better)
Translates to: GGWARRRWWTAR*GARSRGSGTGR
Trigger: CCGGCCTGTCCCCGATCCGCGTGACCTCGCCCCCCACCGTGCAGTCCACCATCTCCTCCTCGCCCATCCACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000506735.1
ENST00000507430.1
ENST00000511377.5
CDS CAA 90 bp CCCGGCCTCTGGAGGGTGGCCGTGGCATACAGCTCCTGCGAGTGCTaGCTGTACTGCTCGGACGCGTGGACCAGGCGCTTGGTGGGCGAC +
Preference number: 6 (lower is better)
Translates to: PGLWRVAVAYSSCEC*LYCSDAWTRRLVGD
Trigger: GTCGCCCACCAAGCGCCTGGTCCACGCGTCCGAGCAGTACAGCAAGCACTCGCAGGAGCTGTATGCCACGGCCACCCTCCAGAGGCCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000495388.6
ENST00000506735.1
ENST00000507430.1
ENST00000511377.5
CDS GCA 72 bp GGACCAGGCGCTTGGTGGGCGACAGGGTGGCGTACGTaGCGATGGTGGAGCTCAGCTGGTGGATGGGCGAGG +
Preference number: 6 (lower is better)
Translates to: GPGAWWATGWRT*RWWSSAGGWAR
Trigger: CCTCGCCCATCCACCAGCTGAGCTCCACCATCGGCACGTACGCCACCCTGTCGCCCACCAAGCGCCTGGTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000506735.1
ENST00000507430.1
ENST00000511377.5
CDS GCA 72 bp TCGCGCCAGGTGGCAGCGAGCCTTTACCTGCCAGGCTaGCCGGCCTCTGGAGGGTGGCCGTGGCATACAGCT +
Preference number: 6 (lower is better)
Translates to: SRQVAASLYLPG*PASGGWPWHTA
Trigger: AGCTGTATGCCACGGCCACCCTCCAGAGGCCGGGCAGCCTGGCAGGTAAAGGCTCGCTGCCACCTGGCGCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495388.6
CDS CCA 72 bp CGGACGCGTGGACCAGGCGCTTGGTGGGCGACAGGGTaGCGTACGTGCCGATGGTGGAGCTCAGCTGGTGGA +
Preference number: 6 (lower is better)
Translates to: RTRGPGAWWATG*RTCRWWSSAGG
Trigger: TCCACCAGCTGAGCTCCACCATCGGCACGTACGCCACCCTGTCGCCCACCAAGCGCCTGGTCCACGCGTCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000506735.1
ENST00000507430.1
ENST00000511377.5
CDS GCA 72 bp CCCGGCCTCTGGAGGGTGGCCGTGGCATACAGCTCCTaGGAGTGCTTGCTGTACTGCTCGGACGCGTGGACC +
Preference number: 6 (lower is better)
Translates to: PGLWRVAVAYSS*ECLLYCSDAWT
Trigger: GGTCCACGCGTCCGAGCAGTACAGCAAGCACTCGCAGGAGCTGTATGCCACGGCCACCCTCCAGAGGCCGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000495388.6
ENST00000506735.1
ENST00000507430.1
ENST00000511377.5
CDS GCA 72 bp GACTGCAGGGCCCGCAACTCTGGGCCCAGGTGCCCATaGTGGCTGCTGTATGAGGCTCGGGAACCAGCTGCC +
Preference number: 6 (lower is better)
Translates to: DCRARNSGPRCP*WLLYEAREPAA
Trigger: GGCAGCTGGTTCCCGAGCCTCATACAGCAGCCAGCATGGGCACCTGGGCCCAGAGTTGCGGGCCCTGCAGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000506735.1
ENST00000507430.1
ENST00000511377.5
CDS GCA 72 bp GACTGCAGGGCCCGCAACTCTGGGCCCAGGTGCCCATaGTGGCTGCTGTATGAGGCTCGGGAACCAGCTGGC +
Preference number: 6 (lower is better)
Translates to: DCRARNSGPRCP*WLLYEAREPAG
Trigger: GCCAGCTGGTTCCCGAGCCTCATACAGCAGCCAGCATGGGCACCTGGGCCCAGAGTTGCGGGCCCTGCAGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504499.5
CDS CCA 72 bp GGCGCTTGGTGGGCGACAGGGTGGCGTACGTGCCGATaGTGGAGCTCAGCTGGTGGATGGGCGAGGAGGAGA +
Preference number: 6 (lower is better)
Translates to: GAWWATGWRTCR*WSSAGGWARRR
Trigger: TCTCCTCCTCGCCCATCCACCAGCTGAGCTCCACCATCGGCACGTACGCCACCCTGTCGCCCACCAAGCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000506735.1
ENST00000507430.1
ENST00000511377.5
CDS CCA 72 bp TGCTGTACTGCTCGGACGCGTGGACCAGGCGCTTGGTaGGCGACAGGGTGGCGTACGTGCCGATGGTGGAGC +
Preference number: 6 (lower is better)
Translates to: CCTARTRGPGAW*ATGWRTCRWWS
Trigger: GCTCCACCATCGGCACGTACGCCACCCTGTCGCCCACCAAGCGCCTGGTCCACGCGTCCGAGCAGTACAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000506735.1
ENST00000507430.1
ENST00000511377.5
CDS CCA 72 bp GCTTGCTGTACTGCTCGGACGCGTGGACCAGGCGCTTaGTGGGCGACAGGGTGGCGTACGTGCCGATGGTGG +
Preference number: 6 (lower is better)
Translates to: ACCTARTRGPGA*WATGWRTCRWW
Trigger: CCACCATCGGCACGTACGCCACCCTGTCGCCCACCAAGCGCCTGGTCCACGCGTCCGAGCAGTACAGCAAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000506735.1
ENST00000507430.1
ENST00000511377.5
CDS CCA 72 bp TGCAGGGCCCGCAACTCTGGGCCCAGGTGCCCATGCTaGCTGCTGTATGAGGCTCGGGAACCAGCTGCCAGG +
Preference number: 6 (lower is better)
Translates to: CRARNSGPRCPC*LLYEAREPAAR
Trigger: CCTGGCAGCTGGTTCCCGAGCCTCATACAGCAGCCAGCATGGGCACCTGGGCCCAGAGTTGCGGGCCCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000506735.1
ENST00000507430.1
ENST00000511377.5
CDS CCA 72 bp CACACCTGTGCTCGTGCGGTAGGTGCCGGTGTGTGCTaGCGGCAGAGGGTCCCCCTGGCTCTGGCTGAGACT +
Preference number: 6 (lower is better)
Translates to: HTCARAVGAGVC*RQRVPLALAET
Trigger: AGTCTCAGCCAGAGCCAGGGGGACCCTCTGCCGCCAGCACACACCGGCACCTACCGCACGAGCACAGGTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506735.1
ENST00000507430.1
CDS CAA 90 bp AGAGGCGTGCGCGGCGCCGCCCGGCTTCAGGGCAAGGTCCTGACCTaGCCCAACTGCAGCATCTTCCGCTTTTGTTGTCTGAGCGCGGCC +
Preference number: 6 (lower is better)
Translates to: RGVRGAARLQGKVLT*PNCSIFRFCCLSAA
Trigger: GGCCGCGCTCAGACAACAAAAGCGGAAGATGCTGCAGTTGGGCAAGGTCAGGACCTTGCCCTGAAGCCGGGCGGCGCCGCGCACGCCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000509868.1
ENST00000513588.5
CDS CAA 90 bp TCCTGCGAGTGCTTGCTGTACTGCTCGGACGCGTGGACCAGGCGCTaGGTGGGCGACAGGGTGGCGTACGTGCCGATGGTGGAGCTCAGC +
Preference number: 6 (lower is better)
Translates to: SCECLLYCSDAWTRR*VGDRVAYVPMVELS
Trigger: GCTGAGCTCCACCATCGGCACGTACGCCACCCTGTCGCCCACCAAGCGCCTGGTCCACGCGTCCGAGCAGTACAGCAAGCACTCGCAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000506735.1
ENST00000507430.1
ENST00000511377.5
CDS TCA 72 bp GCCCACCCCCTGTGGACAGGCCACCCAGTGGGGTCCTaGTTACACACCTGTGCTCGTGCGGTAGGTGCCGGT +
Preference number: 6 (lower is better)
Translates to: AHPLWTGHPVGS*LHTCARAVGAG
Trigger: ACCGGCACCTACCGCACGAGCACAGGTGTGTAATCAGGACCCCACTGGGTGGCCTGTCCACAGGGGGTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506735.1
ENST00000507430.1
CDS GCA 72 bp GCCGTGGCATACAGCTCCTGCGAGTGCTTGCTGTACTaGTCGGACGCGTGGACCAGGCGCTTGGTGGGCGAC +
Preference number: 6 (lower is better)
Translates to: AVAYSSCECLLY*SDAWTRRLVGD
Trigger: GTCGCCCACCAAGCGCCTGGTCCACGCGTCCGAGCAGTACAGCAAGCACTCGCAGGAGCTGTATGCCACGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000495388.6
ENST00000506735.1
ENST00000507430.1
ENST00000511377.5
CDS GCA 72 bp CTCTGGAGGGTGGCCGTGGCATACAGCTCCTGCGAGTaGTTGCTGTACTGCTCGGACGCGTGGACCAGGCGC +
Preference number: 6 (lower is better)
Translates to: LWRVAVAYSSCE*LLYCSDAWTRR
Trigger: GCGCCTGGTCCACGCGTCCGAGCAGTACAGCAAGCACTCGCAGGAGCTGTATGCCACGGCCACCCTCCAGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000495388.6
ENST00000506735.1
ENST00000507430.1
ENST00000511377.5
CDS GCA 72 bp TTACACACCTGTGCTCGTGCGGTAGGTGCCGGTGTGTaGTGGCGGCAGAGGGTCCCCCTGGCTCTGGCTGAG +
Preference number: 6 (lower is better)
Translates to: LHTCARAVGAGV*WRQRVPLALAE
Trigger: CTCAGCCAGAGCCAGGGGGACCCTCTGCCGCCAGCACACACCGGCACCTACCGCACGAGCACAGGTGTGTAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506735.1
ENST00000507430.1
CDS CCA 72 bp GGGCTTGTGTGCCTCGGGCCGGGAGCTGTGAAGGGGTaGTTTCCCCCAGGGCCAGGGTCTGGTTGCTATGGT +
Preference number: 6 (lower is better)
Translates to: GLVCLGPGAVKG*FPPGPGSGCYG
Trigger: ACCATAGCAACCAGACCCTGGCCCTGGGGGAAACCACCCCTTCACAGCTCCCGGCCCGAGGCACACAAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513598.5
CDS CCA 72 bp GCTTGGTGGGCGACAGGGTGGCGTACGTGCCGATGGTaGAGCTCAGCTGGTGGATGGGCGAGGAGGAGATGG +
Preference number: 6 (lower is better)
Translates to: AWWATGWRTCRW*SSAGGWARRRW
Trigger: CCATCTCCTCCTCGCCCATCCACCAGCTGAGCTCCACCATCGGCACGTACGCCACCCTGTCGCCCACCAAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000506735.1
ENST00000507430.1
ENST00000511377.5
CDS CCA 72 bp AGCTCCTGCGAGTGCTTGCTGTACTGCTCGGACGCGTaGACCAGGCGCTTGGTGGGCGACAGGGTGGCGTAC +
Preference number: 6 (lower is better)
Translates to: SSCECLLYCSDA*TRRLVGDRVAY
Trigger: GTACGCCACCCTGTCGCCCACCAAGCGCCTGGTCCACGCGTCCGAGCAGTACAGCAAGCACTCGCAGGAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000506735.1
ENST00000507430.1
ENST00000511377.5
CDS CAA 72 bp TGCTTGCTGTACTGCTCGGACGCGTGGACCAGGCGCTaGGTGGGCGACAGGGTGGCGTACGTGCCGATGGTG +
Preference number: 6 (lower is better)
Translates to: CLLYCSDAWTRR*VGDRVAYVPMV
Trigger: CACCATCGGCACGTACGCCACCCTGTCGCCCACCAAGCGCCTGGTCCACGCGTCCGAGCAGTACAGCAAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000506735.1
ENST00000507430.1
ENST00000511377.5
CDS CAA 90 bp GGGCAAGGTCCTGACCTTGCCCAACTGCAGCATCTTCCGCTTTTGTaGTCTGAGCGCGGCCGCGGGACAAGGGATGCTGGCGGGCGGCAG +
Preference number: 6 (lower is better)
Translates to: GQGPDLAQLQHLPLL*SERGRGTRDAGGRQ
Trigger: CTGCCGCCCGCCAGCATCCCTTGTCCCGCGGCCGCGCTCAGACAACAAAAGCGGAAGATGCTGCAGTTGGGCAAGGTCAGGACCTTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000504499.5
CDS TCA 72 bp CCTTGCCCAACTGCAGCATCTTCCGCTTTTGTTGTCTaGGCGCGGCCGCGGGACAAGGGATGCTGGCGGGCG +
Preference number: 6 (lower is better)
Translates to: PCPTAASSAFVV*ARPRDKGCWRA
Trigger: CGCCCGCCAGCATCCCTTGTCCCGCGGCCGCGCTCAGACAACAAAAGCGGAAGATGCTGCAGTTGGGCAAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000504499.5
CDS GCA 72 bp GACAGGCCACCCAGTGGGGTCCTGATTACACACCTGTaGTCGTGCGGTAGGTGCCGGTGTGTGCTGGCGGCA +
Preference number: 6 (lower is better)
Translates to: DRPPSGVLITHL*SCGRCRCVLAA
Trigger: TGCCGCCAGCACACACCGGCACCTACCGCACGAGCACAGGTGTGTAATCAGGACCCCACTGGGTGGCCTGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506735.1
ENST00000507430.1
CDS GCA 72 bp GACTGCAGGGCCCGCAACTCTGGGCCCAGGTGCCCATaGTGGCTGCTGTATGAGGCTCGGGAACCAGCTCAT +
Preference number: 6 (lower is better)
Translates to: DCRARNSGPRCP*WLLYEAREPAH
Trigger: ATGAGCTGGTTCCCGAGCCTCATACAGCAGCCAGCATGGGCACCTGGGCCCAGAGTTGCGGGCCCTGCAGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504354.5
CDS CCA 72 bp TGCAGGGCCCGCAACTCTGGGCCCAGGTGCCCATGCTaGCTGCTGTATGAGGCTCGGGAACCAGCTCATGCT +
Preference number: 6 (lower is better)
Translates to: CRARNSGPRCPC*LLYEAREPAHA
Trigger: AGCATGAGCTGGTTCCCGAGCCTCATACAGCAGCCAGCATGGGCACCTGGGCCCAGAGTTGCGGGCCCTGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504354.5
CDS CAA 72 bp TGGAGGGTGGCCGTGGCATACAGCTCCTGCGAGTGCTaGCTGTACTGCTCGGACGCGTGGACCAGGCGCTTG +
Preference number: 6 (lower is better)
Translates to: WRVAVAYSSCEC*LYCSDAWTRRL
Trigger: CAAGCGCCTGGTCCACGCGTCCGAGCAGTACAGCAAGCACTCGCAGGAGCTGTATGCCACGGCCACCCTCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000495388.6
ENST00000506735.1
ENST00000507430.1
ENST00000511377.5
CDS CAA 90 bp TCAGGGCAAGGTCCTGACCTTGCCCAACTGCAGCATCTTCCGCTTTaGTTGTCTGAGCGCGGCCGCGGGACAAGGGATGCTGGCGGGCGG +
Preference number: 6 (lower is better)
Translates to: SGQGPDLAQLQHLPL*LSERGRGTRDAGGR
Trigger: CCGCCCGCCAGCATCCCTTGTCCCGCGGCCGCGCTCAGACAACAAAAGCGGAAGATGCTGCAGTTGGGCAAGGTCAGGACCTTGCCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000504499.5
CDS GCA 72 bp GACTGCAGGGCCCGCAACTCTGGGCCCAGGTGCCCATaGTGGCTGCTGTATGAGGCTCGGGAACCAGTTTCA +
Preference number: 6 (lower is better)
Translates to: DCRARNSGPRCP*WLLYEAREPVS
Trigger: TGAAACTGGTTCCCGAGCCTCATACAGCAGCCAGCATGGGCACCTGGGCCCAGAGTTGCGGGCCCTGCAGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502551.5
ENST00000503622.5
ENST00000513588.5
CDS GCA 72 bp GACTGCAGGGCCCGCAACTCTGGGCCCAGGTGCCCATaGTGGCTGCTGTATGAGGCTCGGGAACCAGTTGTT +
Preference number: 6 (lower is better)
Translates to: DCRARNSGPRCP*WLLYEAREPVV
Trigger: AACAACTGGTTCCCGAGCCTCATACAGCAGCCAGCATGGGCACCTGGGCCCAGAGTTGCGGGCCCTGCAGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495388.6
CDS CCA 72 bp TGCAGGGCCCGCAACTCTGGGCCCAGGTGCCCATGCTaGCTGCTGTATGAGGCTCGGGAACCAGTTTCACCT +
Preference number: 6 (lower is better)
Translates to: CRARNSGPRCPC*LLYEAREPVSP
Trigger: AGGTGAAACTGGTTCCCGAGCCTCATACAGCAGCCAGCATGGGCACCTGGGCCCAGAGTTGCGGGCCCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000502551.5
ENST00000503622.5
ENST00000513588.5
CDS CCA 72 bp TGCAGGGCCCGCAACTCTGGGCCCAGGTGCCCATGCTaGCTGCTGTATGAGGCTCGGGAACCAGTTGTTCCA +
Preference number: 6 (lower is better)
Translates to: CRARNSGPRCPC*LLYEAREPVVP
Trigger: TGGAACAACTGGTTCCCGAGCCTCATACAGCAGCCAGCATGGGCACCTGGGCCCAGAGTTGCGGGCCCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495388.6
CDS CAA 72 bp CGCGGCGCCGCCCGGCTTCAGGGCAAGGTCCTGACCTaGCCCAACTGCAGCATCTTCCGCTTTTGTTGTCTG +
Preference number: 6 (lower is better)
Translates to: RGAARLQGKVLT*PNCSIFRFCCL
Trigger: CAGACAACAAAAGCGGAAGATGCTGCAGTTGGGCAAGGTCAGGACCTTGCCCTGAAGCCGGGCGGCGCCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000509868.1
ENST00000513588.5
CDS CAA 72 bp TCCGCAGCGCAGTGGCCACCGCACACCACACGGTCATaGTCTATTCGGAGCAGCTCCACGAGGATGGGCAGG +
Preference number: 6 (lower is better)
Translates to: SAAQWPPHTTRS*SIRSSSTRMGR
Trigger: CCTGCCCATCCTCGTGGAGCTGCTCCGAATAGACAATGACCGTGTGGTGTGCGGTGGCCACTGCGCTGCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458100.6
CDS CAA 90 bp GGGAACCAGCTCATGCTGCTCATGCTGCCAGTCTCGGATCCGAGCTaGCATCGCTCCAGCTGGCTGGCTACGATCTGCCGTTCAGCCTCC +
Preference number: 6 (lower is better)
Translates to: GNQLMLLMLPVSDPS*HRSSWLATICRSAS
Trigger: GGAGGCTGAACGGCAGATCGTAGCCAGCCAGCTGGAGCGATGCAAGCTCGGATCCGAGACTGGCAGCATGAGCAGCATGAGCTGGTTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504354.5
CDS GCA 72 bp GCCCGGCTTCAGGGCAAGGTCCTGACCTTGCCCAACTaGAGCATCTTCCGCTTTTGTTGTCTGAGCGCGGCC +
Preference number: 6 (lower is better)
Translates to: ARLQGKVLTLPN*SIFRFCCLSAA
Trigger: GGCCGCGCTCAGACAACAAAAGCGGAAGATGCTGCAGTTGGGCAAGGTCAGGACCTTGCCCTGAAGCCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000509868.1
ENST00000513588.5
CDS GCA 72 bp CCGAGCTTGCATCGCTCCAGCTGGCTGGCTACGATCTaGCGTTCAGCCTCCAGCTCTCGGGTCAGCCTTTCA +
Preference number: 6 (lower is better)
Translates to: PSLHRSSWLATI*RSASSSRVSLS
Trigger: TGAAAGGCTGACCCGAGAGCTGGAGGCTGAACGGCAGATCGTAGCCAGCCAGCTGGAGCGATGCAAGCTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000304623.13
ENST00000502551.5
ENST00000503622.5
ENST00000504354.5
ENST00000504499.5
ENST00000508761.1
ENST00000509868.1
ENST00000511278.5
ENST00000511377.5
ENST00000513588.5
ENST00000513598.5
CDS CCA 72 bp CTGCCAGTCTCGGATCCGAGCTTGCATCGCTCCAGCTaGCTGGCTACGATCTGCCGTTCAGCCTCCAGCTCT +
Preference number: 6 (lower is better)
Translates to: LPVSDPSLHRSS*LATICRSASSS
Trigger: AGAGCTGGAGGCTGAACGGCAGATCGTAGCCAGCCAGCTGGAGCGATGCAAGCTCGGATCCGAGACTGGCAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000304623.13
ENST00000502551.5
ENST00000503622.5
ENST00000504354.5
ENST00000504499.5
ENST00000508761.1
ENST00000509868.1
ENST00000511278.5
ENST00000511377.5
ENST00000513588.5
ENST00000513598.5
CDS CAA 72 bp CCTGACCTTGCCCAACTGCAGCATCTTCCGCTTTTGTaGTCTGAGCGCGGCCGCGGGACAAGGGATGCTGGC +
Preference number: 6 (lower is better)
Translates to: PDLAQLQHLPLL*SERGRGTRDAG
Trigger: GCCAGCATCCCTTGTCCCGCGGCCGCGCTCAGACAACAAAAGCGGAAGATGCTGCAGTTGGGCAAGGTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000504499.5
CDS CAA 90 bp AGGCCATGTTCCGCAGCGCAGTGGCCACCGCACACCACACGGTCATaGTCTATTCGGAGCAGCTCCACGAGGATGGGCAGGCCTTTCTCT +
Preference number: 6 (lower is better)
Translates to: RPCSAAQWPPHTTRS*SIRSSSTRMGRPFS
Trigger: AGAGAAAGGCCTGCCCATCCTCGTGGAGCTGCTCCGAATAGACAATGACCGTGTGGTGTGCGGTGGCCACTGCGCTGCGGAACATGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458100.6
CDS CCA 72 bp CCCTGGCGTTCTCTGTCTCCTGCAACTACTACAACCTaGCAGACAGCGCGCCCGGCTTCGCTTCTGCTCAAG +
Preference number: 6 (lower is better)
Translates to: PWRSLSPATTTT*QTARPASLLLK
Trigger: CTTGAGCAGAAGCGAAGCCGGGCGCGCTGTCTGCCAGGTTGTAGTAGTTGCAGGAGACAGAGAACGCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495388.6
CDS CAA 72 bp GGTCCTGACCTTGCCCAACTGCAGCATCTTCCGCTTTaGTTGTCTGAGCGCGGCCGCGGGACAAGGGATGCT +
Preference number: 6 (lower is better)
Translates to: GPDLAQLQHLPL*LSERGRGTRDA
Trigger: AGCATCCCTTGTCCCGCGGCCGCGCTCAGACAACAAAAGCGGAAGATGCTGCAGTTGGGCAAGGTCAGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304623.13
ENST00000504499.5
CDS CAA 72 bp CTCATGCTGCTCATGCTGCCAGTCTCGGATCCGAGCTaGCATCGCTCCAGCTGGCTGGCTACGATCTGCCGT +
Preference number: 6 (lower is better)
Translates to: LMLLMLPVSDPS*HRSSWLATICR
Trigger: ACGGCAGATCGTAGCCAGCCAGCTGGAGCGATGCAAGCTCGGATCCGAGACTGGCAGCATGAGCAGCATGAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000304623.13
ENST00000502551.5
ENST00000503622.5
ENST00000504354.5
ENST00000504499.5
ENST00000508761.1
ENST00000509868.1
ENST00000511278.5
ENST00000511377.5
ENST00000513588.5
ENST00000513598.5
CDS CAA 90 bp TCTGCTGAACTCATGCTGCTCATGCTGCCAGTCTCGGATCCGAGCTaGCATCGCTCCAGCTGGCTGGCTACGATCTGCCGTTCAGCCTCC +
Preference number: 6 (lower is better)
Translates to: SAELMLLMLPVSDPS*HRSSWLATICRSAS
Trigger: GGAGGCTGAACGGCAGATCGTAGCCAGCCAGCTGGAGCGATGCAAGCTCGGATCCGAGACTGGCAGCATGAGCAGCATGAGTTCAGCAGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000304623.13
ENST00000502551.5
ENST00000503622.5
ENST00000504499.5
ENST00000508761.1
ENST00000511278.5
ENST00000511377.5
ENST00000513588.5
ENST00000513598.5
CDS CAA 90 bp CTTCTGCTTCTCATGCTGCTCATGCTGCCAGTCTCGGATCCGAGCTaGCATCGCTCCAGCTGGCTGGCTACGATCTGCCGTTCAGCCTCC +
Preference number: 6 (lower is better)
Translates to: LLLLMLLMLPVSDPS*HRSSWLATICRSAS
Trigger: GGAGGCTGAACGGCAGATCGTAGCCAGCCAGCTGGAGCGATGCAAGCTCGGATCCGAGACTGGCAGCATGAGCAGCATGAGAAGCAGAAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509868.1
CDS GCA 72 bp TCATGCTGCTCATGCTGCCAGTCTCGGATCCGAGCTTaGATCGCTCCAGCTGGCTGGCTACGATCTGCCGTT +
Preference number: 6 (lower is better)
Translates to: SCCSCCQSRIRA*IAPAGWLRSAV
Trigger: AACGGCAGATCGTAGCCAGCCAGCTGGAGCGATGCAAGCTCGGATCCGAGACTGGCAGCATGAGCAGCATGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000304623.13
ENST00000502551.5
ENST00000503622.5
ENST00000504354.5
ENST00000504499.5
ENST00000508761.1
ENST00000509868.1
ENST00000511278.5
ENST00000511377.5
ENST00000513588.5
ENST00000513598.5
CDS GCA 72 bp GTGAAGGGGTGGTTTCCCCCAGGGCCAGGGTCTGGTTaGTATGGTAGCTGGCCGGATACTGGAAAGACCCTT +
Preference number: 6 (lower is better)
Translates to: VKGWFPPGPGSG*YGSWPDTGKTL
Trigger: AAGGGTCTTTCCAGTATCCGGCCAGCTACCATAGCAACCAGACCCTGGCCCTGGGGGAAACCACCCCTTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000511377.5
ENST00000513598.5
CDS GCA 72 bp AGTTGTTCCAGGAAAGCCCTGGCGTTCTCTGTCTCCTaGAACTACTACAACCTGGCAGACAGCGCGCCCGGC +
Preference number: 6 (lower is better)
Translates to: SCSRKALAFSVS*NYYNLADSAPG
Trigger: GCCGGGCGCGCTGTCTGCCAGGTTGTAGTAGTTGCAGGAGACAGAGAACGCCAGGGCTTTCCTGGAACAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495388.6
CDS CAA 90 bp GAGGCGAGGATGGCAGAGGTGGTTTCTGTTTCAGAGCCATCCCCGTaGGAGGTGTTTAAGCCGGGGCTCAGGGAACTCGTCTTCTCTGAG +
Preference number: 6 (lower is better)
Translates to: EARMAEVVSVSEPSP*EVFKPGLRELVFSE
Trigger: CTCAGAGAAGACGAGTTCCCTGAGCCCCGGCTTAAACACCTCCAACGGGGATGGCTCTGAAACAGAAACCACCTCTGCCATCCTCGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000304623.13
ENST00000502551.5
ENST00000504499.5
ENST00000508761.1
ENST00000509868.1
ENST00000511278.5
ENST00000513588.5
CDS GCA 72 bp CTCAGGAGCAGCGCTGAGGTGTTCCCTTGTAGGGTCTaGACATGGAGGCAGAATGTGCTCCTGTCATGGCAT +
Preference number: 6 (lower is better)
Translates to: LRSSAEVFPCRV*TWRQNVLLSWH
Trigger: ATGCCATGACAGGAGCACATTCTGCCTCCATGTGCAGACCCTACAAGGGAACACCTCAGCGCTGCTCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513588.5
CDS CCA 72 bp TGGCAGAGGTGGTTTCTGTTTCAGAGCCATCCCCGTTaGAGGTGTTTAAGCCGGGGCTCAGGGAACTCGTCT +
Preference number: 6 (lower is better)
Translates to: WQRWFLFQSHPR*RCLSRGSGNSS
Trigger: AGACGAGTTCCCTGAGCCCCGGCTTAAACACCTCCAACGGGGATGGCTCTGAAACAGAAACCACCTCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000304623.13
ENST00000502551.5
ENST00000504499.5
ENST00000508761.1
ENST00000509868.1
ENST00000511278.5
ENST00000513588.5
CDS CAA 72 bp ATGGCAGAGGTGGTTTCTGTTTCAGAGCCATCCCCGTaGGAGGTGTTTAAGCCGGGGCTCAGGGAACTCGTC +
Preference number: 6 (lower is better)
Translates to: MAEVVSVSEPSP*EVFKPGLRELV
Trigger: GACGAGTTCCCTGAGCCCCGGCTTAAACACCTCCAACGGGGATGGCTCTGAAACAGAAACCACCTCTGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000304623.13
ENST00000502551.5
ENST00000504499.5
ENST00000508761.1
ENST00000509868.1
ENST00000511278.5
ENST00000513588.5
CDS GCA 72 bp GAAACTGCTCTTCTGCTGAACTCATGCTGCTCATGCTaGCAGTCTCGGATCCGAGCTTGCATCGCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: ETALLLNSCCSC*QSRIRACIAPA
Trigger: AGCTGGAGCGATGCAAGCTCGGATCCGAGACTGGCAGCATGAGCAGCATGAGTTCAGCAGAAGAGCAGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000304623.13
ENST00000502551.5
ENST00000503622.5
ENST00000504499.5
ENST00000508761.1
ENST00000511278.5
ENST00000511377.5
ENST00000513588.5
ENST00000513598.5
CDS CCA 72 bp TTTCCCCCAGGGCCAGGGTCTGGTTGCTATGGTAGCTaGCCGGATACTGGAAAGACCCTTCAGGTTTGGAAT +
Preference number: 6 (lower is better)
Translates to: FPPGPGSGCYGS*PDTGKTLQVWN
Trigger: ATTCCAAACCTGAAGGGTCTTTCCAGTATCCGGCCAGCTACCATAGCAACCAGACCCTGGCCCTGGGGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304623.13
ENST00000504499.5
ENST00000508761.1
ENST00000511377.5
ENST00000513598.5
CDS CCA 72 bp AGCAGCGCTGAGGTGTTCCCTTGTAGGGTCTGCACATaGAGGCAGAATGTGCTCCTGTCATGGCATCTTTCC +
Preference number: 6 (lower is better)
Translates to: SSAEVFPCRVCT*RQNVLLSWHLS
Trigger: GGAAAGATGCCATGACAGGAGCACATTCTGCCTCCATGTGCAGACCCTACAAGGGAACACCTCAGCGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513588.5
CDS GCA 72 bp TCGCTTTCAGCCATTAATTACGGATCACCCCAATTTTaGATCGCTCATCTCCCATACACACGCACAGCCTTC +
Preference number: 6 (lower is better)
Translates to: SLSAINYGSPQF*IAHLPYTRTAF
Trigger: GAAGGCTGTGCGTGTGTATGGGAGATGAGCGATGCAAAATTGGGGTGATCCGTAATTAATGGCTGAAAGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511278.5
CDS CAA 90 bp GCCGGCGCGGCTGGTCGTGCCTTCTTACAGTTTATTCTGTTGCTATaGTCGCGTGGATTCTTCTTTTTGGACAATGAAAAGTTAAACGGA +
Preference number: 6 (lower is better)
Translates to: AGAAGRAFLQFILLL*SRGFFFLDNEKLNG
Trigger: TCCGTTTAACTTTTCATTGTCCAAAAAGAAGAATCCACGCGACAATAGCAACAGAATAAACTGTAAGAAGGCACGACCAGCCGCGCCGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514132.1
CDS GCA 72 bp GCGCGGCTGGTCGTGCCTTCTTACAGTTTATTCTGTTaGTATTGTCGCGTGGATTCTTCTTTTTGGACAATG +
Preference number: 6 (lower is better)
Translates to: ARLVVPSYSLFC*YCRVDSSFWTM
Trigger: CATTGTCCAAAAAGAAGAATCCACGCGACAATAGCAACAGAATAAACTGTAAGAAGGCACGACCAGCCGCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514132.1
CDS CAA 72 bp GGCGCGGCTGGTCGTGCCTTCTTACAGTTTATTCTGTaGCTATTGTCGCGTGGATTCTTCTTTTTGGACAAT +
Preference number: 6 (lower is better)
Translates to: GAAGRAFLQFIL*LLSRGFFFLDN
Trigger: ATTGTCCAAAAAGAAGAATCCACGCGACAATAGCAACAGAATAAACTGTAAGAAGGCACGACCAGCCGCGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514132.1