RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CTNNA3 (Homo sapiens)

Ensembl gene IDs: ENSG00000183230

Ensembl transcript IDs: ENST00000330298.6, ENST00000373735.2, ENST00000433211.7, ENST00000494580.1, ENST00000545309.3, ENST00000682166.1, ENST00000682505.1, ENST00000682758.1, ENST00000682945.1, ENST00000683272.1, ENST00000683624.1, ENST00000683630.1, ENST00000683771.1, ENST00000683963.1, ENST00000684154.1, ENST00000684489.1

Found 398 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCTCAGAATAAAACTTATGGTCGGCCCCACAGCCCATCTCTTGCCTaGGGATGGGATTCTGGTCAGGTTGAGTTCCATTTGGAGACAGCT +
Preference number: 1 (lower is better)
Translates to: SQNKTYGRPHSPSLA*GWDSGQVEFHLETA
Trigger: AGCTGTCTCCAAATGGAACTCAACCTGACCAGAATCCCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR CCA 90 bp AATAAAACTTATGGTCGGCCCCACAGCCCATCTCTTGCCTGCGGATaGGATTCTGGTCAGGTTGAGTTCCATTTGGAGACAGCTCTCTCA +
Preference number: 1 (lower is better)
Translates to: NKTYGRPHSPSLACG*DSGQVEFHLETALS
Trigger: TGAGAGAGCTGTCTCCAAATGGAACTCAACCTGACCAGAATCCCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR TCA 90 bp AGGATACCTAGCCCAGAGGTGGGTGAGATGAGAACACCCTCAAAATaGAGGTTCAGGAAGCCGTTGAAGTCACTTACTCTGTTGTTACAC +
Preference number: 1 (lower is better)
Translates to: RIPSPEVGEMRTPSK*RFRKPLKSLTLLLH
Trigger: GTGTAACAACAGAGTAAGTGACTTCAACGGCTTCCTGAACCTTCATTTTGAGGGTGTTCTCATCTCACCCACCTCTGGGCTAGGTATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR GCA 90 bp TCAATCCATGTGTTTTGTTCCCACAAACCAGTGGGGACTGCTAGATaGCATAATGCAGCCAGCAGCCATAAAGCATCTCGTCTCAGAATA +
Preference number: 1 (lower is better)
Translates to: SIHVFCSHKPVGTAR*HNAASSHKASRLRI
Trigger: TATTCTGAGACGAGATGCTTTATGGCTGCTGGCTGCATTATGGCATCTAGCAGTCCCCACTGGTTTGTGGGAACAAAACACATGGATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR GCA 90 bp AGTTATTGTAGGCCAGTCTATGGTGCAAAACAGGGAGGAGTTTATTaGCTTCACCTCCTAGGAAGTTTTACACTGAGCTCAGGCAATCCA +
Preference number: 1 (lower is better)
Translates to: SYCRPVYGAKQGGVY*LHLLGSFTLSSGNP
Trigger: TGGATTGCCTGAGCTCAGTGTAAAACTTCCTAGGAGGTGAAGGCAATAAACTCCTCCCTGTTTTGCACCATAGACTGGCCTACAATAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR GCA 90 bp CTGAATTCCCTAATTCCCTTCTTCACTGCCTTTTCTTCTGGGCAGTaGATTCTGTTCAGAATAGTTATTGTAGGCCAGTCTATGGTGCAA +
Preference number: 1 (lower is better)
Translates to: LNSLIPFFTAFSSGQ*ILFRIVIVGQSMVQ
Trigger: TTGCACCATAGACTGGCCTACAATAACTATTCTGAACAGAATGCACTGCCCAGAAGAAAAGGCAGTGAAGAAGGGAATTAGGGAATTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR CCA 90 bp ACTCATATTGAATATCAATCCATGTGTTTTGTTCCCACAAACCAGTaGGGACTGCTAGATGCCATAATGCAGCCAGCAGCCATAAAGCAT +
Preference number: 1 (lower is better)
Translates to: THIEYQSMCFVPTNQ*GLLDAIMQPAAIKH
Trigger: ATGCTTTATGGCTGCTGGCTGCATTATGGCATCTAGCAGTCCCCACTGGTTTGTGGGAACAAAACACATGGATTGATATTCAATATGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR TCA 90 bp GGCAGTTCATTCAATCATATTCTGTCTCTGCAGAGCAGGGTGAAATaGACAAGCAAGATAGTCAGAAACACCTCAAACGCCACTAAACTT +
Preference number: 1 (lower is better)
Translates to: GSSFNHILSLQSRVK*TSKIVRNTSNATKL
Trigger: AAGTTTAGTGGCGTTTGAGGTGTTTCTGACTATCTTGCTTGTTCATTTCACCCTGCTCTGCAGAGACAGAATATGATTGAATGAACTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR CCA 90 bp GAGTCATCTGAATTCCCTAATTCCCTTCTTCACTGCCTTTTCTTCTaGGCAGTGCATTCTGTTCAGAATAGTTATTGTAGGCCAGTCTAT +
Preference number: 1 (lower is better)
Translates to: ESSEFPNSLLHCLFF*AVHSVQNSYCRPVY
Trigger: ATAGACTGGCCTACAATAACTATTCTGAACAGAATGCACTGCCCAGAAGAAAAGGCAGTGAAGAAGGGAATTAGGGAATTCAGATGACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR TCA 90 bp TTGGTGTCCAATACTGCATGTTCTAAACTCCAACATGTGGAAAGATaGTGTTGGGTCCGGTGGACATTAGATTTTCTAAATGAGATGCTT +
Preference number: 1 (lower is better)
Translates to: LVSNTACSKLQHVER*CWVRWTLDFLNEML
Trigger: AAGCATCTCATTTAGAAAATCTAATGTCCACCGGACCCAACATCATCTTTCCACATGTTGGAGTTTAGAACATGCAGTATTGGACACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR GCA 90 bp ACTACAGGAATTCACTCAGGTGGACAGATGCCTTTTTCAGCTCTATaGATCTTGTTTTTATGTCACTATCGATTACCACAGCAGATTAAC +
Preference number: 1 (lower is better)
Translates to: TTGIHSGGQMPFSAL*ILFLCHYRLPQQIN
Trigger: GTTAATCTGCTGTGGTAATCGATAGTGACATAAAAACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR GCA 90 bp ATCTTGAAATGCTGCCTACTACAGGAATTCACTCAGGTGGACAGATaGCTTTTTCAGCTCTATGCATCTTGTTTTTATGTCACTATCGAT +
Preference number: 1 (lower is better)
Translates to: ILKCCLLQEFTQVDR*LFQLYASCFYVTID
Trigger: ATCGATAGTGACATAAAAACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAGTAGGCAGCATTTCAAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR CCA 90 bp AGTGAAAGAGGCTGTTTATTCTGCAATGAGTTCACAAGAGAATGGTaGATATCACCAGGAAAAGTCTCAGATCTTATTCCACTCATACTA +
Preference number: 1 (lower is better)
Translates to: SERGCLFCNEFTREW*ISPGKVSDLIPLIL
Trigger: TAGTATGAGTGGAATAAGATCTGAGACTTTTCCTGGTGATATCCACCATTCTCTTGTGAACTCATTGCAGAATAAACAGCCTCTTTCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR CCA 90 bp GAAAGTGAAAGAGGCTGTTTATTCTGCAATGAGTTCACAAGAGAATaGTGGATATCACCAGGAAAAGTCTCAGATCTTATTCCACTCATA +
Preference number: 1 (lower is better)
Translates to: ESERGCLFCNEFTRE*WISPGKVSDLIPLI
Trigger: TATGAGTGGAATAAGATCTGAGACTTTTCCTGGTGATATCCACCATTCTCTTGTGAACTCATTGCAGAATAAACAGCCTCTTTCACTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR GCA 90 bp ACAATATTACTAAATCATGCTCAAAATATGTGTAGTTCATCCTTTTaGCTTCGACACGACTTCACCAAACCACCAAGACAAGTGTCTCAT +
Preference number: 1 (lower is better)
Translates to: TILLNHAQNMCSSSF*LRHDFTKPPRQVSH
Trigger: ATGAGACACTTGTCTTGGTGGTTTGGTGAAGTCGTGTCGAAGGCAAAAGGATGAACTACACATATTTTGAGCATGATTTAGTAATATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR GCA 90 bp GTTTTCAGGAACTTGTTAGTCACGGATATGGAGGAGAAATTATTATaGTACCATTTAGGTCTAAGGAAATTTTCTTTGGAGGGACTGTAC +
Preference number: 1 (lower is better)
Translates to: VFRNLLVTDMEEKLL*YHLGLRKFSLEGLY
Trigger: GTACAGTCCCTCCAAAGAAAATTTCCTTAGACCTAAATGGTAGCATAATAATTTCTCCTCCATATCCGTGACTAACAAGTTCCTGAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR TCA 90 bp GCTCATGTTAGTGTTTTAATTCAAGATAAGGATGATAAGTGTACATaGAGTATTACAGATAAACAGGACTCTCTGGCCTCTCCTGTGTTT +
Preference number: 1 (lower is better)
Translates to: AHVSVLIQDKDDKCT*SITDKQDSLASPVF
Trigger: AAACACAGGAGAGGCCAGAGAGTCCTGTTTATCTGTAATACTTCATGTACACTTATCATCCTTATCTTGAATTAAAACACTAACATGAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR TCA 90 bp AATTTTATGTTTAAATATTCAGGAAGGAGGATAGTTCTGTTTAACTaGGAGCAGGGGCTAGCATCTCTGACTTACTCCTTTGCTTTACTA +
Preference number: 1 (lower is better)
Translates to: NFMFKYSGRRIVLFN*EQGLASLTYSFALL
Trigger: TAGTAAAGCAAAGGAGTAAGTCAGAGATGCTAGCCCCTGCTCTCAGTTAAACAGAACTATCCTCCTTCCTGAATATTTAAACATAAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR GCA 90 bp ACCATTATGCTTAAGATTCCACACATATCGTACTGTCAATCTTTATaGTTTTCTATGTTTCATGCATCCTTTTACCCAAACTGGTTCTCC +
Preference number: 1 (lower is better)
Translates to: TIMLKIPHISYCQSL*FSMFHASFYPNWFS
Trigger: GGAGAACCAGTTTGGGTAAAAGGATGCATGAAACATAGAAAAGCATAAAGATTGACAGTACGATATGTGTGGAATCTTAAGCATAATGGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR CCA 90 bp TTGAGCAAGATTCTTATCCCATTTAACCCTCAGCTTCCTTGTCTGTaGAATGATATATATCCTATAGGGTTATTTGGAGGATTGAATAAG +
Preference number: 1 (lower is better)
Translates to: LSKILIPFNPQLPCL*NDIYPIGLFGGLNK
Trigger: CTTATTCAATCCTCCAAATAACCCTATAGGATATATATCATTCCACAGACAAGGAAGCTGAGGGTTAAATGGGATAAGAATCTTGCTCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR TCA 90 bp CTAATATTGGGAAGAATTTCACCTACCATCAGTCAGGAGAATGGCTaGATTTCTGTTTCTCAACTTGCAAACAATATTACTAAATCATGC +
Preference number: 1 (lower is better)
Translates to: LILGRISPTISQENG*ISVSQLANNITKSC
Trigger: GCATGATTTAGTAATATTGTTTGCAAGTTGAGAAACAGAAATTCAGCCATTCTCCTGACTGATGGTAGGTGAAATTCTTCCCAATATTAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR TCA 90 bp TTGGTGTTAACAAATGGTATTAACCAACCAATACTGAAGATGGGCTaGAACAGGCATTTCATTGAAGCTTTCTTCTCCATGGTAATAAAA +
Preference number: 1 (lower is better)
Translates to: LVLTNGINQPILKMG*NRHFIEAFFSMVIK
Trigger: TTTTATTACCATGGAGAAGAAAGCTTCAATGAAATGCCTGTTTCAGCCCATCTTCAGTATTGGTTGGTTAATACCATTTGTTAACACCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR GCA 90 bp TCCACACATATCGTACTGTCAATCTTTATGCTTTTCTATGTTTCATaGATCCTTTTACCCAAACTGGTTCTCCTAATATCAACTGGTATT +
Preference number: 1 (lower is better)
Translates to: STHIVLSIFMLFYVS*ILLPKLVLLISTGI
Trigger: AATACCAGTTGATATTAGGAGAACCAGTTTGGGTAAAAGGATGCATGAAACATAGAAAAGCATAAAGATTGACAGTACGATATGTGTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR TCA 90 bp TCTCAGAATAAAACTTATGGTCGGCCCCACAGCCCATCTCTTGCCTGCGGATGGAGGTTACATCGTTGCTaGGACGCCTCTCATCAATGG +
Preference number: 2 (lower is better)
Translates to: SQNKTYGRPHSPSLACGWRLHRC*DASHQW
Trigger: CCATTGATGAGAGGCGTCTCAGCAACGATGTAACCT...CCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR CAA 90 bp TCTCGTCTCAGAATAAAACTTATGGTCGGCCCCACAGCCCATCTCTaGCCTGCGGATGGGATTCTGGTCAGGTTGAGTTCCATTTGGAGA +
Preference number: 2 (lower is better)
Translates to: SRLRIKLMVGPTAHL*PADGILVRLSSIWR
Trigger: TCTCCAAATGGAACTCAACCTGACCAGAATCCCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTCTGAGACGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR TCA 90 bp TCTCAGAATAAAACTTATGGTCGGCCCCACAGCCCATCTCTTGCCTGCGGATGGGGTTCAGGAAGCCGTTaGAGTCACTTACTCTGTTGT +
Preference number: 2 (lower is better)
Translates to: SQNKTYGRPHSPSLACGWGSGSR*SHLLCC
Trigger: ACAACAGAGTAAGTGACTTCAACGGCTTCCTGAACC...CCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR TCA 90 bp TCTCAGAATAAAACTTATGGTCGGCCCCACAGCCCATCTCTTGCCTGCGGATGGAGAACACCCTCAAAATaGAGGTTCAGGAAGCCGTTG +
Preference number: 2 (lower is better)
Translates to: SQNKTYGRPHSPSLACGWRTPSK*RFRKPL
Trigger: CAACGGCTTCCTGAACCTTCATTTTGAGGGTGTTCT...CCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR CCA 90 bp CCTCTCAGACCCTTCCCTACCTCTGGCACCTTCTTATTTGTTGTGCCTTTAGACATGGAACTGCTCCTGTaGGTGGTAAACACCCCTCTC +
Preference number: 2 (lower is better)
Translates to: PLRPFPTSGTFLFVVPLDMELLL*VVNTPL
Trigger: GAGAGGGGTGTTTACCACCCACAGGAGCAGTTCCAT...GTCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGTCTGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR CAA 90 bp GGCCCCACAGCCCATCTCTTGCCTGCGGATGGGATTCTGGTCAGGTaGAGTTCCATTTGGAGACAGCTCTCTCAATTAACATTACTTTCT +
Preference number: 2 (lower is better)
Translates to: GPTAHLLPADGILVR*SSIWRQLSQLTLLS
Trigger: AGAAAGTAATGTTAATTGAGAGAGCTGTCTCCAAATGGAACTCAACCTGACCAGAATCCCATCCGCAGGCAAGAGATGGGCTGTGGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR TCA 90 bp TCTCAGAATAAAACTTATGGTCGGCCCCACAGCCCATCTCTTGCCTGCGGATGGTGGAAACCCAAAAGGTaGGTATGTGGCATCAGAACT +
Preference number: 2 (lower is better)
Translates to: SQNKTYGRPHSPSLACGWWKPKR*VCGIRT
Trigger: AGTTCTGATGCCACATACTCACCTTTTGGGTTTCCA...CCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTCTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR TCA 90 bp CCTCTCAGACCCTTCCCTACCTCTGGCACCTTCTTATTTGTTGTGCCTTTAGACGGATTCTGGTCAGGTTaGGTTCCATTTGGAGACAGC +
Preference number: 2 (lower is better)
Translates to: PLRPFPTSGTFLFVVPLDGFWSG*VPFGDS
Trigger: GCTGTCTCCAAATGGAACTCAACCTGACCAGAATCC...GTCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGTCTGAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR CCA 90 bp CCTCTCAGACCCTTCCCTACCTCTGGCACCTTCTTATTTGTTGTGCCTTTAGACGTTCCCACAAACCAGTaGGGACTGCTAGATGCCATA +
Preference number: 2 (lower is better)
Translates to: PLRPFPTSGTFLFVVPLDVPTNQ*GLLDAI
Trigger: TATGGCATCTAGCAGTCCCCACTGGTTTGTGGGAAC...GTCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGTCTGAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR TCA 90 bp TCTCAGAATAAAACTTATGGTCGGCCCCACAGCCCATCTCTTGCCTGCGGATGGTGCTTTGAGCTAAGCTaGAAATCTGCCTGGGTTAAA +
Preference number: 2 (lower is better)
Translates to: SQNKTYGRPHSPSLACGWCFELS*KSAWVK
Trigger: TTTAACCCAGGCAGATTTTCAGCTTAGCTCAAAGCA...CCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR GCA 90 bp TCTCAGAATAAAACTTATGGTCGGCCCCACAGCCCATCTCTTGCCTGCGGATGGTTCTGCCTGGTTAGGTaGCAGGTTAGATCAGATAAA +
Preference number: 2 (lower is better)
Translates to: SQNKTYGRPHSPSLACGWFCLVR*QVRSDK
Trigger: TTTATCTGATCTAACCTGGCACCTAACCAGGCAGAA...CCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR CCA 90 bp TCTCAGAATAAAACTTATGGTCGGCCCCACAGCCCATCTCTTGCCTGCGGATGGCTAAACTCCAACATGTaGAAAGATGATGTTGGGTCC +
Preference number: 2 (lower is better)
Translates to: SQNKTYGRPHSPSLACGWLNSNM*KDDVGS
Trigger: GGACCCAACATCATCTTTCCACATGTTGGAGTTTAG...CCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR CCA 90 bp CCTCTCAGACCCTTCCCTACCTCTGGCACCTTCTTATTTGTTGTGCCTTTAGACGCCAGACTGCAAGAATaGGTGTCTCTGTGTAGCTAT +
Preference number: 2 (lower is better)
Translates to: PLRPFPTSGTFLFVVPLDARLQE*VSLCSY
Trigger: ATAGCTACACAGAGACACCCATTCTTGCAGTCTGGC...GTCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGTCTGAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR TCA 90 bp TCTCAGAATAAAACTTATGGTCGGCCCCACAGCCCATCTCTTGCCTGCGGATGGCTGTTTATTCTGCAATaGGTTCACAAGAGAATGGTG +
Preference number: 2 (lower is better)
Translates to: SQNKTYGRPHSPSLACGWLFILQ*VHKRMV
Trigger: CACCATTCTCTTGTGAACTCATTGCAGAATAAACAG...CCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTCTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR CCA 90 bp CCTCTCAGACCCTTCCCTACCTCTGGCACCTTCTTATTTGTTGTGCCTTTAGACTTCAAATTCAGATTCTaGTGCCTGCTTTGCCAACCT +
Preference number: 2 (lower is better)
Translates to: PLRPFPTSGTFLFVVPLDFKFRF*CLLCQP
Trigger: AGGTTGGCAAAGCAGGCACCAGAATCTGAATTTGAA...GTCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGTCTGAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR GCA 90 bp CCTCTCAGACCCTTCCCTACCTCTGGCACCTTCTTATTTGTTGTGCCTTTAGACATGGGCAGTCCTGATTaGACTATTTTGGTAGGAAAT +
Preference number: 2 (lower is better)
Translates to: PLRPFPTSGTFLFVVPLDMGSPD*TILVGN
Trigger: ATTTCCTACCAAAATAGTGCAATCAGGACTGCCCAT...GTCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGTCTGAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR GCA 90 bp CCTCTCAGACCCTTCCCTACCTCTGGCACCTTCTTATTTGTTGTGCCTTTAGACAAATTCAGATTCTGGTaGCTGCTTTGCCAACCTAAA +
Preference number: 2 (lower is better)
Translates to: PLRPFPTSGTFLFVVPLDKFRFW*LLCQPK
Trigger: TTTAGGTTGGCAAAGCAGGCACCAGAATCTGAATTT...GTCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGTCTGAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR CCA 90 bp TCTCAGAATAAAACTTATGGTCGGCCCCACAGCCCATCTCTTGCCTGCGGATGGTGCTTCATAGTTCAATaGTACAGTTCATGCAGTTAT +
Preference number: 2 (lower is better)
Translates to: SQNKTYGRPHSPSLACGWCFIVQ*YSSCSY
Trigger: ATAACTGCATGAACTGTACCATTGAACTATGAAGCA...CCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR CCA 90 bp CCTCTCAGACCCTTCCCTACCTCTGGCACCTTCTTATTTGTTGTGCCTTTAGACGGAGAGAGATATTTTTaGTTCACAGAAGAGGAAAGG +
Preference number: 2 (lower is better)
Translates to: PLRPFPTSGTFLFVVPLDGERYF*FTEEER
Trigger: CCTTTCCTCTTCTGTGAACCAAAAATATCTCTCTCC...GTCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGTCTGAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR GCA 90 bp AACTTGTTAGTCACGGATATGGAGGAGAAATTATTATGCTACCATTTAGGTCTACCACAGCCCATCTCTTaGCTGCGGATGGGATTCTGG +
Preference number: 2 (lower is better)
Translates to: NLLVTDMEEKLLCYHLGLPQPIS*LRMGFW
Trigger: CCAGAATCCCATCCGCAGGCAAGAGATGGGCTGTGG...TAGACCTAAATGGTAGCATAATAATTTCTCCTCCATATCCGTGACTAACAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR TCA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATCAACATGTGGAAAGATaGTGTTGGGTCCGGTGGACA +
Preference number: 2 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYQHVER*CWVRWT
Trigger: TGTCCACCGGACCCAACATCATCTTTCCACATGTTG...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR CCA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATCACTGCCTTTTCTTCTaGGCAGTGCATTCTGTTCAG +
Preference number: 2 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYHCLFF*AVHSVQ
Trigger: CTGAACAGAATGCACTGCCCAGAAGAAAAGGCAGTG...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR CCA 90 bp AACTTGTTAGTCACGGATATGGAGGAGAAATTATTATGCTACCATTTAGGTCTATGGCAGGGATACTGGTaGGTAACCAGGGATGGAACT +
Preference number: 2 (lower is better)
Translates to: NLLVTDMEEKLLCYHLGLWQGYW*VTRDGT
Trigger: AGTTCCATCCCTGGTTACCCACCAGTATCCCTGCCA...TAGACCTAAATGGTAGCATAATAATTTCTCCTCCATATCCGTGACTAACAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR CCA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTTTCCAGTCTAACATCTaGCAGGGATACTGGTGGGTA +
Preference number: 2 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCFQSNI*QGYWWV
Trigger: TACCCACCAGTATCCCTGCCAGATGTTAGACTGGAA...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR TCA 90 bp CTACAGGAATTCACTCAGGTGGACAGATGCCTTTTTCAGCTCTATGCATCTTGTCAGCTGGTAGTTTGGTaGTTAAAAGAAAATTCCTCT +
Preference number: 2 (lower is better)
Translates to: LQEFTQVDRCLFQLYASCQLVVW*LKENSS
Trigger: AGAGGAATTTTCTTTTAATCACCAAACTACCAGCTG...ACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR GCA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTGGAATCATACATTTCTaGCTGGTTAGGTGCCAGGTT +
Preference number: 2 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCGIIHF*LVRCQV
Trigger: AACCTGGCACCTAACCAGGCAGAAATGTATGATTCC...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR GCA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATTCAGATTCTGGTGCCTaGTTTGCCAACCTAAAGAAC +
Preference number: 2 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYSDSGA*FANLKN
Trigger: GTTCTTTAGGTTGGCAAAGCAGGCACCAGAATCTGA...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR GCA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTTGTAGTTCATCCTTTTaGCTTCGACACGACTTCACC +
Preference number: 2 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCCSSSF*LRHDFT
Trigger: GGTGAAGTCGTGTCGAAGGCAAAAGGATGAACTACA...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR CCA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTACCCTTCCCTACCTCTaGCACCTTCTTATTTGTTGT +
Preference number: 2 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCTLPYL*HLLICC
Trigger: ACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGT...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR TCA 90 bp AACTTGTTAGTCACGGATATGGAGGAGAAATTATTATGCTACCATTTAGGTCTATGGAGTAATTTGCTGTaGTGGGCAGTCCTGATTGCA +
Preference number: 2 (lower is better)
Translates to: NLLVTDMEEKLLCYHLGLWSNLL*WAVLIA
Trigger: TGCAATCAGGACTGCCCATCACAGCAAATTACTCCA...TAGACCTAAATGGTAGCATAATAATTTCTCCTCCATATCCGTGACTAACAAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR GCA 90 bp CTACAGGAATTCACTCAGGTGGACAGATGCCTTTTTCAGCTCTATGCATCTTGTCTTTTCTATGTTTCATaGATCCTTTTACCCAAACTG +
Preference number: 2 (lower is better)
Translates to: LQEFTQVDRCLFQLYASCLFYVS*ILLPKL
Trigger: CAGTTTGGGTAAAAGGATGCATGAAACATAGAAAAG...ACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR GCA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATTTCTGGTGCCTGCTTTaGCAACCTAAAGAACTACTT +
Preference number: 2 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYFWCLL*QPKELL
Trigger: AAGTAGTTCTTTAGGTTGGCAAAGCAGGCACCAGAA...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR GCA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTAAGAACCTAGAACAGTaGCTGGAACATCACAGTTGT +
Preference number: 2 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCKNLEQ*LEHHSC
Trigger: ACAACTGTGATGTTCCAGGCACTGTTCTAGGTTCTT...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR CCA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTTCATACATTTCTGCCTaGTTAGGTGCCAGGTTAGAT +
Preference number: 2 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCSYISA*LGARLD
Trigger: ATCTAACCTGGCACCTAACCAGGCAGAAATGTATGA...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR CCA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTGGAGCATTAATTATTTaGTCTGAAGGCCCAAGTTGC +
Preference number: 2 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCGALII*SEGPSC
Trigger: GCAACTTGGGCCTTCAGACCAAATAATTAATGCTCC...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR TCA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATTATGATGGGAAACGCTaGATGACACGTGATAATTTC +
Preference number: 2 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYYDGKR*MTRDNF
Trigger: GAAATTATCACGTGTCATTCAGCGTTTCCCATCATA...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR TCA 90 bp AACTTGTTAGTCACGGATATGGAGGAGAAATTATTATGCTACCATTTAGGTCTAACACAGATGGGGAACTaGTGTGACATACCTAAGGTT +
Preference number: 2 (lower is better)
Translates to: NLLVTDMEEKLLCYHLGLTQMGN*CDIPKV
Trigger: AACCTTAGGTATGTCACATCAGTTCCCCATCTGTGT...TAGACCTAAATGGTAGCATAATAATTTCTCCTCCATATCCGTGACTAACAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR GCA 90 bp AACTTGTTAGTCACGGATATGGAGGAGAAATTATTATGCTACCATTTAGGTCTAACTCAGGTGGACAGATaGCTTTTTCAGCTCTATGCA +
Preference number: 2 (lower is better)
Translates to: NLLVTDMEEKLLCYHLGLTQVDR*LFQLYA
Trigger: TGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGT...TAGACCTAAATGGTAGCATAATAATTTCTCCTCCATATCCGTGACTAACAAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR GCA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATTCTGAAGGCCCAAGTTaGGCACTTAATTGTATATTC +
Preference number: 2 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYSEGPS*ALNCIF
Trigger: GAATATACAATTAAGTGCGCAACTTGGGCCTTCAGA...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR CCA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATATAAACAGGACTCTCTaGCCTCTCCTGTGTTTATTT +
Preference number: 2 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYINRTL*PLLCLF
Trigger: AAATAAACACAGGAGAGGCCAGAGAGTCCTGTTTAT...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR CCA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTGAAAACAGGGGCATCTaGAAATCTTTCTCTAGAAGT +
Preference number: 2 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCENRGI*KSFSRS
Trigger: ACTTCTAGAGAAAGATTTCCAGATGCCCCTGTTTTC...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR TCA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATTTAACTATTAGGTGCTaGCCATACAGAAATGACAGT +
Preference number: 2 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYLTIRC*PYRNDS
Trigger: ACTGTCATTTCTGTATGGTCAGCACCTAATAGTTAA...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR CCA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTCAAAAGGTACATAGGTaGATCACCAAATTATCACTC +
Preference number: 2 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCQKVHR*ITKLSL
Trigger: GAGTGATAATTTGGTGATCCACCTATGTACCTTTTG...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR GCA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATTTCATTGCCATTAACTaGTTCATAGTTCAATGGTAC +
Preference number: 2 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYFIAIN*FIVQWY
Trigger: GTACCATTGAACTATGAAGCAGTTAATGGCAATGAA...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR CCA 90 bp AACTTGTTAGTCACGGATATGGAGGAGAAATTATTATGCTACCATTTAGGTCTAAATGAACACAGTGACTaGAGTTGTAAAATGACCCCA +
Preference number: 2 (lower is better)
Translates to: NLLVTDMEEKLLCYHLGLNEHSD*SCKMTP
Trigger: TGGGGTCATTTTACAACTCCAGTCACTGTGTTCATT...TAGACCTAAATGGTAGCATAATAATTTCTCCTCCATATCCGTGACTAACAAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR CCA 90 bp AACTTGTTAGTCACGGATATGGAGGAGAAATTATTATGCTACCATTTAGGTCTAGAGTTCACAAGAGAATaGTGGATATCACCAGGAAAA +
Preference number: 2 (lower is better)
Translates to: NLLVTDMEEKLLCYHLGLEFTRE*WISPGK
Trigger: TTTTCCTGGTGATATCCACCATTCTCTTGTGAACTC...TAGACCTAAATGGTAGCATAATAATTTCTCCTCCATATCCGTGACTAACAAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR CCA 90 bp AACTTGTTAGTCACGGATATGGAGGAGAAATTATTATGCTACCATTTAGGTCTATCATTAAGAAATTTCTaGCAATCCTCTGCAGAAGAA +
Preference number: 2 (lower is better)
Translates to: NLLVTDMEEKLLCYHLGLSLRNF*QSSAEE
Trigger: TTCTTCTGCAGAGGATTGCCAGAAATTTCTTAATGA...TAGACCTAAATGGTAGCATAATAATTTCTCCTCCATATCCGTGACTAACAAGTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR CCA 72 bp TATGGTCGGCCCCACAGCCCATCTCTTGCCTGCGGATaGGATTCTGGTCAGGTTGAGTTCCATTTGGAGACA +
Preference number: 3 (lower is better)
Translates to: YGRPHSPSLACG*DSGQVEFHLET
Trigger: TGTCTCCAAATGGAACTCAACCTGACCAGAATCCCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR CAA 90 bp CCTCTCAGACCCTTCCCTACCTCTGGCACCTTCTTATTTGTTGTGCCTTTAGACGGGATTCTGGTCAGGTaGAGTTCCATTTGGAGACAG +
Preference number: 3 (lower is better)
Translates to: PLRPFPTSGTFLFVVPLDGILVR*SSIWRQ
Trigger: CTGTCTCCAAATGGAACTCAACCTGACCAGAATCCC...GTCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGTCTGAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR TCA 72 bp AGCCCAGAGGTGGGTGAGATGAGAACACCCTCAAAATaGAGGTTCAGGAAGCCGTTGAAGTCACTTACTCTG +
Preference number: 3 (lower is better)
Translates to: SPEVGEMRTPSK*RFRKPLKSLTL
Trigger: CAGAGTAAGTGACTTCAACGGCTTCCTGAACCTTCATTTTGAGGGTGTTCTCATCTCACCCACCTCTGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR GCA 72 bp GTGTTTTGTTCCCACAAACCAGTGGGGACTGCTAGATaGCATAATGCAGCCAGCAGCCATAAAGCATCTCGT +
Preference number: 3 (lower is better)
Translates to: VFCSHKPVGTAR*HNAASSHKASR
Trigger: ACGAGATGCTTTATGGCTGCTGGCTGCATTATGGCATCTAGCAGTCCCCACTGGTTTGTGGGAACAAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR TCA 72 bp ATTAACAGAGGATACCTAGCCCAGAGGTGGGTGAGATaGGAACACCCTCAAAATGAAGGTTCAGGAAGCCGT +
Preference number: 3 (lower is better)
Translates to: INRGYLAQRWVR*EHPQNEGSGSR
Trigger: ACGGCTTCCTGAACCTTCATTTTGAGGGTGTTCTCATCTCACCCACCTCTGGGCTAGGTATCCTCTGTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR CCA 72 bp GAATATCAATCCATGTGTTTTGTTCCCACAAACCAGTaGGGACTGCTAGATGCCATAATGCAGCCAGCAGCC +
Preference number: 3 (lower is better)
Translates to: EYQSMCFVPTNQ*GLLDAIMQPAA
Trigger: GGCTGCTGGCTGCATTATGGCATCTAGCAGTCCCCACTGGTTTGTGGGAACAAAACACATGGATTGATATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR CAA 90 bp CTACAGGAATTCACTCAGGTGGACAGATGCCTTTTTCAGCTCTATGCATCTTGTACAGGGAGGAGTTTATaGCCTTCACCTCCTAGGAAG +
Preference number: 3 (lower is better)
Translates to: LQEFTQVDRCLFQLYASCTGRSL*PSPPRK
Trigger: CTTCCTAGGAGGTGAAGGCAATAAACTCCTCCCTGT...ACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR CAA 90 bp CCTCTCAGACCCTTCCCTACCTCTGGCACCTTCTTATTTGTTGTGCCTTTAGACGTTAAAGAGGAGAACTaGTTCACATCTCACTTTGGG +
Preference number: 3 (lower is better)
Translates to: PLRPFPTSGTFLFVVPLDVKEEN*FTSHFG
Trigger: CCCAAAGTGAGATGTGAACAAGTTCTCCTCTTTAAC...GTCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGTCTGAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR CAA 90 bp TCTCAGAATAAAACTTATGGTCGGCCCCACAGCCCATCTCTTGCCTGCGGATGGACTCTCAAACTGCTATaGTTATTAGTCCTGGCTTAT +
Preference number: 3 (lower is better)
Translates to: SQNKTYGRPHSPSLACGWTLKLL*LLVLAY
Trigger: ATAAGCCAGGACTAATAACAATAGCAGTTTGAGAGT...CCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR GCA 72 bp CTGAGAGCAGGGGCTAGCATCTCTGACTTACTCCTTTaGTTTACTAATAAACACTCCACTACAAATCTGGTG +
Preference number: 3 (lower is better)
Translates to: LRAGASISDLLL*FTNKHSTTNLV
Trigger: CACCAGATTTGTAGTGGAGTGTTTATTAGTAAAGCAAAGGAGTAAGTCAGAGATGCTAGCCCCTGCTCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR CAA 90 bp CTACAGGAATTCACTCAGGTGGACAGATGCCTTTTTCAGCTCTATGCATCTTGTGAACTCTCTAACACATaGGAAACCCAAAAGGTGAGT +
Preference number: 3 (lower is better)
Translates to: LQEFTQVDRCLFQLYASCELSNT*ETQKVS
Trigger: ACTCACCTTTTGGGTTTCCAATGTGTTAGAGAGTTC...ACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR TCA 72 bp ATCAGAAAGTCATTTAACTCTCCAAGGCCTGAGATTTaGAAGCCTATCCAGCAACATGGGCAAGAAGAGTCT +
Preference number: 3 (lower is better)
Translates to: IRKSFNSPRPEI*KPIQQHGQEES
Trigger: AGACTCTTCTTGCCCATGTTGCTGGATAGGCTTTCAAATCTCAGGCCTTGGAGAGTTAAATGACTTTCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR TCA 72 bp TTCAATCATATTCTGTCTCTGCAGAGCAGGGTGAAATaGACAAGCAAGATAGTCAGAAACACCTCAAACGCC +
Preference number: 3 (lower is better)
Translates to: FNHILSLQSRVK*TSKIVRNTSNA
Trigger: GGCGTTTGAGGTGTTTCTGACTATCTTGCTTGTTCATTTCACCCTGCTCTGCAGAGACAGAATATGATTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR GCA 72 bp GCTATGGCAGGAATCATACATTTCTGCCTGGTTAGGTaGCAGGTTAGATCAGATAAAGAAAGCATGGAGATT +
Preference number: 3 (lower is better)
Translates to: AMAGIIHFCLVR*QVRSDKESMEI
Trigger: AATCTCCATGCTTTCTTTATCTGATCTAACCTGGCACCTAACCAGGCAGAAATGTATGATTCCTGCCATAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR CAA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTTCTAAGGTTACATCGTaGCTGAGACGCCTCTCATCA +
Preference number: 3 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCSKVTS*LRRLSS
Trigger: TGATGAGAGGCGTCTCAGCAACGATGTAACCTTAGA...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR CAA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATAGGTTCAGGAAGCCGTaGAAGTCACTTACTCTGTTG +
Preference number: 3 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYRFRKP*KSLTLL
Trigger: CAACAGAGTAAGTGACTTCAACGGCTTCCTGAACCT...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR CAA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTTTTCCTTTCCTACAGTaGGGAATAGGCACCATCATG +
Preference number: 3 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCFPFLQ*GIGTIM
Trigger: CATGATGGTGCCTATTCCCAACTGTAGGAAAGGAAA...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR TCA 72 bp TTTAAATATTCAGGAAGGAGGATAGTTCTGTTTAACTaGGAGCAGGGGCTAGCATCTCTGACTTACTCCTTT +
Preference number: 3 (lower is better)
Translates to: FKYSGRRIVLFN*EQGLASLTYSF
Trigger: AAAGGAGTAAGTCAGAGATGCTAGCCCCTGCTCTCAGTTAAACAGAACTATCCTCCTTCCTGAATATTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR GCA 72 bp CTAAATCATGCTCAAAATATGTGTAGTTCATCCTTTTaGCTTCGACACGACTTCACCAAACCACCAAGACAA +
Preference number: 3 (lower is better)
Translates to: LNHAQNMCSSSF*LRHDFTKPPRQ
Trigger: TTGTCTTGGTGGTTTGGTGAAGTCGTGTCGAAGGCAAAAGGATGAACTACACATATTTTGAGCATGATTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR TCA 72 bp ACAAATGGTATTAACCAACCAATACTGAAGATGGGCTaGAACAGGCATTTCATTGAAGCTTTCTTCTCCATG +
Preference number: 3 (lower is better)
Translates to: TNGINQPILKMG*NRHFIEAFFSM
Trigger: CATGGAGAAGAAAGCTTCAATGAAATGCCTGTTTCAGCCCATCTTCAGTATTGGTTGGTTAATACCATTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR CCA 72 bp AGAGGCTGTTTATTCTGCAATGAGTTCACAAGAGAATaGTGGATATCACCAGGAAAAGTCTCAGATCTTATT +
Preference number: 3 (lower is better)
Translates to: RGCLFCNEFTRE*WISPGKVSDLI
Trigger: AATAAGATCTGAGACTTTTCCTGGTGATATCCACCATTCTCTTGTGAACTCATTGCAGAATAAACAGCCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR CAA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATTCAGCTCTATGCATCTaGTTTTTATGTCACTATCGA +
Preference number: 3 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYSALCI*FLCHYR
Trigger: TCGATAGTGACATAAAAACAAGATGCATAGAGCTGA...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR CAA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTGAAATGGATTCTATCTaGTCTGTTAGGGGGAAAATA +
Preference number: 3 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCEMDSI*SVRGKI
Trigger: TATTTTCCCCCTAACAGACAAGATAGAATCCATTTC...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR TCA 72 bp AATACTGCATGTTCTAAACTCCAACATGTGGAAAGATaGTGTTGGGTCCGGTGGACATTAGATTTTCTAAAT +
Preference number: 3 (lower is better)
Translates to: NTACSKLQHVER*CWVRWTLDFLN
Trigger: ATTTAGAAAATCTAATGTCCACCGGACCCAACATCATCTTTCCACATGTTGGAGTTTAGAACATGCAGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR CAA 90 bp AACTTGTTAGTCACGGATATGGAGGAGAAATTATTATGCTACCATTTAGGTCTATGGTTAGGCAGGATTTaGTCATATAGGCACTATATG +
Preference number: 3 (lower is better)
Translates to: NLLVTDMEEKLLCYHLGLWLGRI*SYRHYM
Trigger: CATATAGTGCCTATATGACAAAATCCTGCCTAACCA...TAGACCTAAATGGTAGCATAATAATTTCTCCTCCATATCCGTGACTAACAAGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR-3UTR CAA 90 bp AACTTGTTAGTCACGGATATGGAGGAGAAATTATTATGCTACCATTTAGGTCTACAATATACACATCCATaGCTCAAACTAGGAATGTGT +
Preference number: 3 (lower is better)
Translates to: NLLVTDMEEKLLCYHLGLQYTHP*LKLGMC
Trigger: ACACATTCCTAGTTTGAGCAATGGATGTGTATATTG...TAGACCTAAATGGTAGCATAATAATTTCTCCTCCATATCCGTGACTAACAAGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR TCA 72 bp TCGTCTCCATTTTTCTCCAACTTACCAAACTCATATTaGATATCAATCCATGTGTTTTGTTCCCACAAACCA +
Preference number: 3 (lower is better)
Translates to: SSPFFSNLPNSY*ISIHVFCSHKP
Trigger: TGGTTTGTGGGAACAAAACACATGGATTGATATTCAATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR GCA 72 bp ATCGTACTGTCAATCTTTATGCTTTTCTATGTTTCATaGATCCTTTTACCCAAACTGGTTCTCCTAATATCA +
Preference number: 3 (lower is better)
Translates to: IVLSIFMLFYVS*ILLPKLVLLIS
Trigger: TGATATTAGGAGAACCAGTTTGGGTAAAAGGATGCATGAAACATAGAAAAGCATAAAGATTGACAGTACGAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR GCA 72 bp AACTTGTTAGTCACGGATATGGAGGAGAAATTATTATaGTACCATTTAGGTCTAAGGAAATTTTCTTTGGAG +
Preference number: 3 (lower is better)
Translates to: NLLVTDMEEKLL*YHLGLRKFSLE
Trigger: CTCCAAAGAAAATTTCCTTAGACCTAAATGGTAGCATAATAATTTCTCCTCCATATCCGTGACTAACAAGTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR GCA 90 bp TCTCAGAATAAAACTTATGGTCGGCCCCACAGCCCATCTCTTGCCTGCGGATGGGGCACTTCCCAGGGTTaGTGCCTGAGGTTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: SQNKTYGRPHSPSLACGWGTSQG*CLRFWW
Trigger: CCACCAGAACCTCAGGCAGCAACCCTGGGAAGTGCC...CCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTCTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp CCTCTCAGACCCTTCCCTACCTCTGGCACCTTCTTATTTGTTGTGCCTTTAGACCCCAGGGTTGCTGCCTaGGGTTCTGGTGGGGTTGTC +
Preference number: 4 (lower is better)
Translates to: PLRPFPTSGTFLFVVPLDPRVAA*GSGGVV
Trigger: GACAACCCCACCAGAACCTCAGGCAGCAACCCTGGG...GTCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGTCTGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR GCA 90 bp CCTCTCAGACCCTTCCCTACCTCTGGCACCTTCTTATTTGTTGTGCCTTTAGACCACATCACAACTGGGTaGCGGGGCCCAGCAGGACTC +
Preference number: 4 (lower is better)
Translates to: PLRPFPTSGTFLFVVPLDHITTG*RGPAGL
Trigger: GAGTCCTGCTGGGCCCCGGCACCCAGTTGTGATGTG...GTCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGTCTGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp TCTCAGAATAAAACTTATGGTCGGCCCCACAGCCCATCTCTTGCCTGCGGATGGAAGGCACGGGCAGCTTaGACCACAGCCTCCCTTTTT +
Preference number: 4 (lower is better)
Translates to: SQNKTYGRPHSPSLACGWKARAA*TTASLF
Trigger: AAAAAGGGAGGCTGTGGTTCAAGCTGCCCGTGCCTT...CCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTCTGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp TCTCAGAATAAAACTTATGGTCGGCCCCACAGCCCATCTCTTGCCTGCGGATGGTTGCTGAGCCTCGTCTaGCAGCTGCACACGTTTCCT +
Preference number: 4 (lower is better)
Translates to: SQNKTYGRPHSPSLACGWLLSLV*QLHTFP
Trigger: AGGAAACGTGTGCAGCTGTCAGACGAGGCTCAGCAA...CCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp CCTCTCAGACCCTTCCCTACCTCTGGCACCTTCTTATTTGTTGTGCCTTTAGACTCACCCGTGACGATGTaGGCAACTCTTGCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: PLRPFPTSGTFLFVVPLDSPVTM*ATLAAR
Trigger: CCGGGCAGCAAGAGTTGCTCACATCGTCACGGGTGA...GTCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGTCTGAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR GCA 90 bp TCTCAGAATAAAACTTATGGTCGGCCCCACAGCCCATCTCTTGCCTGCGGATGGGATGTGAGCAACTCTTaGTGCCCGGCCTCTGATAGC +
Preference number: 4 (lower is better)
Translates to: SQNKTYGRPHSPSLACGWDVSNS*CPASDS
Trigger: GCTATCAGAGGCCGGGCAGCAAGAGTTGCTCACATC...CCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR CAA 72 bp AGAATAAAACTTATGGTCGGCCCCACAGCCCATCTCTaGCCTGCGGATGGGATTCTGGTCAGGTTGAGTTCC +
Preference number: 4 (lower is better)
Translates to: RIKLMVGPTAHL*PADGILVRLSS
Trigger: GGAACTCAACCTGACCAGAATCCCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp TCTCAGAATAAAACTTATGGTCGGCCCCACAGCCCATCTCTTGCCTGCGGATGGGTTCCCACAAACCAGTaGGGACTGCTAGATGCCATA +
Preference number: 4 (lower is better)
Translates to: SQNKTYGRPHSPSLACGWVPTNQ*GLLDAI
Trigger: TATGGCATCTAGCAGTCCCCACTGGTTTGTGGGAAC...CCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp CCTCTCAGACCCTTCCCTACCTCTGGCACCTTCTTATTTGTTGTGCCTTTAGACGGCAGTCAATTTCGCTaGGCGTTGTTCACCCAGGAT +
Preference number: 4 (lower is better)
Translates to: PLRPFPTSGTFLFVVPLDGSQFR*ALFTQD
Trigger: ATCCTGGGTGAACAACGCTCAGCGAAATTGACTGCC...GTCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGTCTGAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR GCA 90 bp TCTCAGAATAAAACTTATGGTCGGCCCCACAGCCCATCTCTTGCCTGCGGATGGTTGACTTTTGGGTCTTaGAGCCAAAGCAAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: SQNKTYGRPHSPSLACGWLTFGS*SQSKCS
Trigger: GCTGCACTTGCTTTGGCTGCAAGACCCAAAAGTCAA...CCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp CCTCTCAGACCCTTCCCTACCTCTGGCACCTTCTTATTTGTTGTGCCTTTAGACGTAGCTTCTCCACGGTaGATGTTTGGACCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: PLRPFPTSGTFLFVVPLDVASPR*MFGPAD
Trigger: ATCTGCAGGTCCAAACATTCACCGTGGAGAAGCTAC...GTCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGTCTGAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp CCTCTCAGACCCTTCCCTACCTCTGGCACCTTCTTATTTGTTGTGCCTTTAGACGTGTTTTTGACCGCTTaGCTTTTGGGTCTTGCAGCC +
Preference number: 4 (lower is better)
Translates to: PLRPFPTSGTFLFVVPLDVFLTA*LLGLAA
Trigger: GGCTGCAAGACCCAAAAGTCAAGCGGTCAAAAACAC...GTCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGTCTGAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp CCTCTCAGACCCTTCCCTACCTCTGGCACCTTCTTATTTGTTGTGCCTTTAGACTGTCCATTTCACCCGTaGCGATGTGAGCAACTCTTG +
Preference number: 4 (lower is better)
Translates to: PLRPFPTSGTFLFVVPLDCPFHP*RCEQLL
Trigger: CAAGAGTTGCTCACATCGTCACGGGTGAAATGGACA...GTCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGTCTGAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR GCA 90 bp TCTCAGAATAAAACTTATGGTCGGCCCCACAGCCCATCTCTTGCCTGCGGATGGAACTGTGTCCTTGCTTaGTTTGAGGGAAGCAACATC +
Preference number: 4 (lower is better)
Translates to: SQNKTYGRPHSPSLACGWNCVLA*FEGSNI
Trigger: GATGTTGCTTCCCTCAAAGCAAGCAAGGACACAGTT...CCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTCTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR GCA 90 bp CCTCTCAGACCCTTCCCTACCTCTGGCACCTTCTTATTTGTTGTGCCTTTAGACAATGGCGTTGCATTCTaGGATAATCCGCTCTCGGTG +
Preference number: 4 (lower is better)
Translates to: PLRPFPTSGTFLFVVPLDNGVAF*DNPLSV
Trigger: CACCGAGAGCGGATTATCGCAGAATGCAACGCCATT...GTCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGTCTGAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR GCA 90 bp CTACAGGAATTCACTCAGGTGGACAGATGCCTTTTTCAGCTCTATGCATCTTGTGTGAGCAACTCTTGCTaGCCGGCCTCTGATAGCACC +
Preference number: 4 (lower is better)
Translates to: LQEFTQVDRCLFQLYASCVSNSC*PASDST
Trigger: GGTGCTATCAGAGGCCGGGCAGCAAGAGTTGCTCAC...ACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR GCA 90 bp TCTCAGAATAAAACTTATGGTCGGCCCCACAGCCCATCTCTTGCCTGCGGATGGTCAGATTCTGGTGCCTaGTTTGCCAACCTAAAGAAC +
Preference number: 4 (lower is better)
Translates to: SQNKTYGRPHSPSLACGWSDSGA*FANLKN
Trigger: GTTCTTTAGGTTGGCAAAGCAGGCACCAGAATCTGA...CCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTCTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR CAA 72 bp GCCCATCTCTTGCCTGCGGATGGGATTCTGGTCAGGTaGAGTTCCATTTGGAGACAGCTCTCTCAATTAACA +
Preference number: 4 (lower is better)
Translates to: AHLLPADGILVR*SSIWRQLSQLT
Trigger: TGTTAATTGAGAGAGCTGTCTCCAAATGGAACTCAACCTGACCAGAATCCCATCCGCAGGCAAGAGATGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp CCTCTCAGACCCTTCCCTACCTCTGGCACCTTCTTATTTGTTGTGCCTTTAGACTGGACCTGCAGATCCTaGGGATCGATATTCAATGTG +
Preference number: 4 (lower is better)
Translates to: PLRPFPTSGTFLFVVPLDWTCRS*GSIFNV
Trigger: CACATTGAATATCGATCCTCAGGATCTGCAGGTCCA...GTCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGTCTGAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp CTACAGGAATTCACTCAGGTGGACAGATGCCTTTTTCAGCTCTATGCATCTTGTTCTGAAAGCAGATCCTaGAGAGCCTGGCGAATGGCG +
Preference number: 4 (lower is better)
Translates to: LQEFTQVDRCLFQLYASCSESRS*RAWRMA
Trigger: CGCCATTCGCCAGGCTCTTCAGGATCTGCTTTCAGA...ACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp TCTCAGAATAAAACTTATGGTCGGCCCCACAGCCCATCTCTTGCCTGCGGATGGCTGCTGGTGTGTTCATaGAATATCGCAGCATATTCT +
Preference number: 4 (lower is better)
Translates to: SQNKTYGRPHSPSLACGWLLVCS*NIAAYS
Trigger: AGAATATGCTGCGATATTTCATGAACACACCAGCAG...CCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp CCTCTCAGACCCTTCCCTACCTCTGGCACCTTCTTATTTGTTGTGCCTTTAGACCCAAGGCCTGAGATTTaGAAGCCTATCCAGCAACAT +
Preference number: 4 (lower is better)
Translates to: PLRPFPTSGTFLFVVPLDPRPEI*KPIQQH
Trigger: ATGTTGCTGGATAGGCTTTCAAATCTCAGGCCTTGG...GTCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGTCTGAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR GCA 90 bp CTACAGGAATTCACTCAGGTGGACAGATGCCTTTTTCAGCTCTATGCATCTTGTTCCCTTCGGTCTGAATaGTGGTGTGACTGCGGACCT +
Preference number: 4 (lower is better)
Translates to: LQEFTQVDRCLFQLYASCSLRSE*WCDCGP
Trigger: AGGTCCGCAGTCACACCAGCATTCAGACCGAAGGGA...ACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR GCA 90 bp TCTCAGAATAAAACTTATGGTCGGCCCCACAGCCCATCTCTTGCCTGCGGATGGAAGAACCTAGAACAGTaGCTGGAACATCACAGTTGT +
Preference number: 4 (lower is better)
Translates to: SQNKTYGRPHSPSLACGWKNLEQ*LEHHSC
Trigger: ACAACTGTGATGTTCCAGGCACTGTTCTAGGTTCTT...CCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTTCTCCACATCACAACTaGGTGCCGGGGCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCSPHHN*VPGPSR
Trigger: CCTGCTGGGCCCCGGCACCCAGTTGTGATGTGGAGA...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp TCTCAGAATAAAACTTATGGTCGGCCCCACAGCCCATCTCTTGCCTGCGGATGGGGAGCATTAATTATTTaGTCTGAAGGCCCAAGTTGC +
Preference number: 4 (lower is better)
Translates to: SQNKTYGRPHSPSLACGWGALII*SEGPSC
Trigger: GCAACTTGGGCCTTCAGACCAAATAATTAATGCTCC...CCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp CTACAGGAATTCACTCAGGTGGACAGATGCCTTTTTCAGCTCTATGCATCTTGTGACACTGTCCAAAGCTaGCATGATGAGCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LQEFTQVDRCLFQLYASCDTVQS*HDELSS
Trigger: GGAGGAGAGCTCATCATGTCAGCTTTGGACAGTGTC...ACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp CCTCTCAGACCCTTCCCTACCTCTGGCACCTTCTTATTTGTTGTGCCTTTAGACGATTGGTGTTTCAGCTaGCATGCTGCCTTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: PLRPFPTSGTFLFVVPLDDWCFS*HAAFLF
Trigger: AAACAGAAAGGCAGCATGTCAGCTGAAACACCAATC...GTCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGTCTGAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp CCTCTCAGACCCTTCCCTACCTCTGGCACCTTCTTATTTGTTGTGCCTTTAGACCCTCCTCAGTTACTGTaGGTGGATTCAGGACAATTA +
Preference number: 4 (lower is better)
Translates to: PLRPFPTSGTFLFVVPLDPPQLL*VDSGQL
Trigger: TAATTGTCCTGAATCCACTCACAGTAACTGAGGAGG...GTCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGTCTGAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp GTACAATTCAACCATAAATGGAGAATGGGAGCCTCATTCTCCTGGACTTTAGTGTCTGAAAGCAGATCCTaGAGAGCCTGGCGAATGGCG +
Preference number: 4 (lower is better)
Translates to: VQFNHKWRMGASFSWTLVSESRS*RAWRMA
Trigger: CGCCATTCGCCAGGCTCTTCAGGATCTGCTTTCAGA...CACTAAAGTCCAGGAGAATGAGGCTCCCATTCTCCATTTATGGTTGAATTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494580.1
CDS-3UTR TCA 90 bp CCTCTCAGACCCTTCCCTACCTCTGGCACCTTCTTATTTGTTGTGCCTTTAGACTTTCCATGGTGTTTTTaGCCGCTTGACTTTTGGGTC +
Preference number: 4 (lower is better)
Translates to: PLRPFPTSGTFLFVVPLDFPWCF*PLDFWV
Trigger: GACCCAAAAGTCAAGCGGTCAAAAACACCATGGAAA...GTCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGTCTGAGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp TCTCAGAATAAAACTTATGGTCGGCCCCACAGCCCATCTCTTGCCTGCGGATGGAAACAGGCATTTCATTaGAGCTTTCTTCTCCATGGT +
Preference number: 4 (lower is better)
Translates to: SQNKTYGRPHSPSLACGWKQAFH*SFLLHG
Trigger: ACCATGGAGAAGAAAGCTTCAATGAAATGCCTGTTT...CCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTCTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp CCTCTCAGACCCTTCCCTACCTCTGGCACCTTCTTATTTGTTGTGCCTTTAGACTTAACCAACCAATACTaGAGATGGGCTGAAACAGGC +
Preference number: 4 (lower is better)
Translates to: PLRPFPTSGTFLFVVPLDLTNQY*RWAETG
Trigger: GCCTGTTTCAGCCCATCTTCAGTATTGGTTGGTTAA...GTCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGTCTGAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR GCA 90 bp CCTCTCAGACCCTTCCCTACCTCTGGCACCTTCTTATTTGTTGTGCCTTTAGACGTGTTTCAGCTGACATaGTGCCTTTCTGTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: PLRPFPTSGTFLFVVPLDVFQLT*CLSVSS
Trigger: GGAAGAAACAGAAAGGCAGCATGTCAGCTGAAACAC...GTCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGTCTGAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR GCA 90 bp CCTCTCAGACCCTTCCCTACCTCTGGCACCTTCTTATTTGTTGTGCCTTTAGACGCTGAACAAATTGAATaGAAGAGGGGAGAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: PLRPFPTSGTFLFVVPLDAEQIE*KRGEFS
Trigger: GGAGAACTCTCCCCTCTTGCATTCAATTTGTTCAGC...GTCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGTCTGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR GCA 90 bp TCTCAGAATAAAACTTATGGTCGGCCCCACAGCCCATCTCTTGCCTGCGGATGGGAAGCAACATCAGAATaGTCCAAACAAGCTGAACAA +
Preference number: 4 (lower is better)
Translates to: SQNKTYGRPHSPSLACGWEATSE*SKQAEQ
Trigger: TTGTTCAGCTTGTTTGGAGCATTCTGATGTTGCTTC...CCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTCTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR GCA 90 bp TTCTGGGCAGTGCATTCTGTTCAGAATAGTTATTGTAGGCCAGTCTATGGTGCAGAATGCTGGTGTGACTaGGGACCTCGTGTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: FWAVHSVQNSYCRPVYGAECWCD*GPRVPL
Trigger: AAGAGGAACACGAGGTCCGCAGTCACACCAGCATTC...TGCACCATAGACTGGCCTACAATAACTATTCTGAACAGAATGCACTGCCCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR GCA 90 bp TCTCAGAATAAAACTTATGGTCGGCCCCACAGCCCATCTCTTGCCTGCGGATGGTCTATGAAAGCTAAATaGTTCTGCAACTACCCCTCT +
Preference number: 4 (lower is better)
Translates to: SQNKTYGRPHSPSLACGWSMKAK*FCNYPS
Trigger: AGAGGGGTAGTTGCAGAAGCATTTAGCTTTCATAGA...CCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTCTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR GCA 90 bp CCTCTCAGACCCTTCCCTACCTCTGGCACCTTCTTATTTGTTGTGCCTTTAGACTGTAGTTCATCCTTTTaGCTTCGACACGACTTCACC +
Preference number: 4 (lower is better)
Translates to: PLRPFPTSGTFLFVVPLDCSSSF*LRHDFT
Trigger: GGTGAAGTCGTGTCGAAGGCAAAAGGATGAACTACA...GTCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGTCTGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp CCTCTCAGACCCTTCCCTACCTCTGGCACCTTCTTATTTGTTGTGCCTTTAGACAAAACTGTAGCTTCCTaGGCAATCTTCTCTCCCTTG +
Preference number: 4 (lower is better)
Translates to: PLRPFPTSGTFLFVVPLDKTVAS*AIFSPL
Trigger: CAAGGGAGAGAAGATTGCCCAGGAAGCTACAGTTTT...GTCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGTCTGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp TTCTGGGCAGTGCATTCTGTTCAGAATAGTTATTGTAGGCCAGTCTATGGTGCAGGCCCAGCAGGACTCTaGATTCGGATGATCTTGGTT +
Preference number: 4 (lower is better)
Translates to: FWAVHSVQNSYCRPVYGAGPAGL*IRMILV
Trigger: AACCAAGATCATCCGAATCCAGAGTCCTGCTGGGCC...TGCACCATAGACTGGCCTACAATAACTATTCTGAACAGAATGCACTGCCCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp CTACAGGAATTCACTCAGGTGGACAGATGCCTTTTTCAGCTCTATGCATCTTGTATCTGGCAGGGATACTaGTGGGTAACCAGGGATGGA +
Preference number: 4 (lower is better)
Translates to: LQEFTQVDRCLFQLYASCIWQGY*WVTRDG
Trigger: TCCATCCCTGGTTACCCACCAGTATCCCTGCCAGAT...ACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp TCTCAGAATAAAACTTATGGTCGGCCCCACAGCCCATCTCTTGCCTGCGGATGGGAGTTCACAAGAGAATaGTGGATATCACCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: SQNKTYGRPHSPSLACGWEFTRE*WISPGK
Trigger: TTTTCCTGGTGATATCCACCATTCTCTTGTGAACTC...CCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTCTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp CTACAGGAATTCACTCAGGTGGACAGATGCCTTTTTCAGCTCTATGCATCTTGTGCGAACTTCCTCAAGTaGAGCCGTAAGCTCATCCTT +
Preference number: 4 (lower is better)
Translates to: LQEFTQVDRCLFQLYASCANFLK*SRKLIL
Trigger: AAGGATGAGCTTACGGCTTCACTTGAGGAAGTTCGC...ACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp TTCTGGGCAGTGCATTCTGTTCAGAATAGTTATTGTAGGCCAGTCTATGGTGCACTTGGATCAGGGATGTaGCACTGTCCAAAGCTGACA +
Preference number: 4 (lower is better)
Translates to: FWAVHSVQNSYCRPVYGALGSGM*HCPKLT
Trigger: TGTCAGCTTTGGACAGTGTCACATCCCTGATCCAAG...TGCACCATAGACTGGCCTACAATAACTATTCTGAACAGAATGCACTGCCCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp CCTCTCAGACCCTTCCCTACCTCTGGCACCTTCTTATTTGTTGTGCCTTTAGACCATCTACGGCTTCAGTaGGGACATGTATATGATTCT +
Preference number: 4 (lower is better)
Translates to: PLRPFPTSGTFLFVVPLDHLRLQ*GHVYDS
Trigger: AGAATCATATACATGTCCTCACTGAAGCCGTAGATG...GTCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGTCTGAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp TTCTGGGCAGTGCATTCTGTTCAGAATAGTTATTGTAGGCCAGTCTATGGTGCACAACATGTGGAAAGATaGTGTTGGGTCCGGTGGACA +
Preference number: 4 (lower is better)
Translates to: FWAVHSVQNSYCRPVYGAQHVER*CWVRWT
Trigger: TGTCCACCGGACCCAACATCATCTTTCCACATGTTG...TGCACCATAGACTGGCCTACAATAACTATTCTGAACAGAATGCACTGCCCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp TTCTGGGCAGTGCATTCTGTTCAGAATAGTTATTGTAGGCCAGTCTATGGTGCAGGATTCTGGTCAGGTTaGGTTCCATTTGGAGACAGC +
Preference number: 4 (lower is better)
Translates to: FWAVHSVQNSYCRPVYGAGFWSG*VPFGDS
Trigger: GCTGTCTCCAAATGGAACTCAACCTGACCAGAATCC...TGCACCATAGACTGGCCTACAATAACTATTCTGAACAGAATGCACTGCCCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp TCTCAGAATAAAACTTATGGTCGGCCCCACAGCCCATCTCTTGCCTGCGGATGGAGGCTTTTGAACTATTaGTACAACTATTCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: SQNKTYGRPHSPSLACGWRLLNY*YNYSKG
Trigger: CCCCTTTGAATAGTTGTATCAATAGTTCAAAAGCCT...CCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp TCTCAGAATAAAACTTATGGTCGGCCCCACAGCCCATCTCTTGCCTGCGGATGGAGGGACTGTACCACATaGGAAAAATTTGCAAAATCA +
Preference number: 4 (lower is better)
Translates to: SQNKTYGRPHSPSLACGWRDCTT*EKFAKS
Trigger: TGATTTTGCAAATTTTTCTCATGTGGTACAGTCCCT...CCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTCTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR GCA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTACTTCCCAGGGTTGCTaGCTGAGGTTCTGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCTSQGC*LRFWWG
Trigger: ACCCCACCAGAACCTCAGGCAGCAACCCTGGGAAGT...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR GCA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATCCACAGCCCATCTCTTaGCTGCGGATGGGATTCTGG +
Preference number: 4 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYPQPIS*LRMGFW
Trigger: CCAGAATCCCATCCGCAGGCAAGAGATGGGCTGTGG...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp CCTCTCAGACCCTTCCCTACCTCTGGCACCTTCTTATTTGTTGTGCCTTTAGACTCATACATTTCTGCCTaGTTAGGTGCCAGGTTAGAT +
Preference number: 4 (lower is better)
Translates to: PLRPFPTSGTFLFVVPLDSYISA*LGARLD
Trigger: ATCTAACCTGGCACCTAACCAGGCAGAAATGTATGA...GTCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGTCTGAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp CTACAGGAATTCACTCAGGTGGACAGATGCCTTTTTCAGCTCTATGCATCTTGTTGGAGTAATTTGCTGTaGTGGGCAGTCCTGATTGCA +
Preference number: 4 (lower is better)
Translates to: LQEFTQVDRCLFQLYASCWSNLL*WAVLIA
Trigger: TGCAATCAGGACTGCCCATCACAGCAAATTACTCCA...ACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp CCTCTCAGACCCTTCCCTACCTCTGGCACCTTCTTATTTGTTGTGCCTTTAGACAGTCAGGAGAATGGCTaGATTTCTGTTTCTCAACTT +
Preference number: 4 (lower is better)
Translates to: PLRPFPTSGTFLFVVPLDSQENG*ISVSQL
Trigger: AAGTTGAGAAACAGAAATTCAGCCATTCTCCTGACT...GTCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGTCTGAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR GCA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTGTGGGGACTGCTAGATaGCATAATGCAGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCVGTAR*HNAASS
Trigger: GCTGCTGGCTGCATTATGGCATCTAGCAGTCCCCAC...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATCTTCGGTCTGAATGCTaGTGTGACTGCGGACCTCGT +
Preference number: 4 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYLRSEC*CDCGPR
Trigger: ACGAGGTCCGCAGTCACACCAGCATTCAGACCGAAG...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp TTCTGGGCAGTGCATTCTGTTCAGAATAGTTATTGTAGGCCAGTCTATGGTGCATTCCAGTCTAACATCTaGCAGGGATACTGGTGGGTA +
Preference number: 4 (lower is better)
Translates to: FWAVHSVQNSYCRPVYGAFQSNI*QGYWWV
Trigger: TACCCACCAGTATCCCTGCCAGATGTTAGACTGGAA...TGCACCATAGACTGGCCTACAATAACTATTCTGAACAGAATGCACTGCCCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTAGAGTTCTCCTTCAGTaGAGCTCGGGCTCCTGCAAT +
Preference number: 4 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCRVLLQ*SSGSCN
Trigger: ATTGCAGGAGCCCGAGCTTCACTGAAGGAGAACTCT...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp CTACAGGAATTCACTCAGGTGGACAGATGCCTTTTTCAGCTCTATGCATCTTGTGTGAGGACATGTATATaGTTCTCCCATGTACGCTTG +
Preference number: 4 (lower is better)
Translates to: LQEFTQVDRCLFQLYASCVRTCI*FSHVRL
Trigger: CAAGCGTACATGGGAGAATCATATACATGTCCTCAC...ACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp TTCTGGGCAGTGCATTCTGTTCAGAATAGTTATTGTAGGCCAGTCTATGGTGCATGGAAACCCAAAAGGTaGGTATGTGGCATCAGAACT +
Preference number: 4 (lower is better)
Translates to: FWAVHSVQNSYCRPVYGAWKPKR*VCGIRT
Trigger: AGTTCTGATGCCACATACTCACCTTTTGGGTTTCCA...TGCACCATAGACTGGCCTACAATAACTATTCTGAACAGAATGCACTGCCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp TTCTGGGCAGTGCATTCTGTTCAGAATAGTTATTGTAGGCCAGTCTATGGTGCAATAGTTCTGTTTAACTaGGAGCAGGGGCTAGCATCT +
Preference number: 4 (lower is better)
Translates to: FWAVHSVQNSYCRPVYGAIVLFN*EQGLAS
Trigger: AGATGCTAGCCCCTGCTCTCAGTTAAACAGAACTAT...TGCACCATAGACTGGCCTACAATAACTATTCTGAACAGAATGCACTGCCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR GCA 90 bp TTTAGGTACAATTCAACCATAAATGGAGAATGGGAGCCTCATTCTCCTGGACTTAATGGCGTTGCATTCTaGGATAATCCGCTCTCGGTG +
Preference number: 4 (lower is better)
Translates to: FRYNSTINGEWEPHSPGLNGVAF*DNPLSV
Trigger: CACCGAGAGCGGATTATCGCAGAATGCAACGCCATT...AAGTCCAGGAGAATGAGGCTCCCATTCTCCATTTATGGTTGAATTGTACCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494580.1
CDS-3UTR CCA 90 bp TTCTGGGCAGTGCATTCTGTTCAGAATAGTTATTGTAGGCCAGTCTATGGTGCAACAAGTGTGGTAACCTaGATTATGAGAGGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: FWAVHSVQNSYCRPVYGATSVVT*IMRGSS
Trigger: ACTGGAGCCTCTCATAATCCAGGTTACCACACTTGT...TGCACCATAGACTGGCCTACAATAACTATTCTGAACAGAATGCACTGCCCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp TTCTGGGCAGTGCATTCTGTTCAGAATAGTTATTGTAGGCCAGTCTATGGTGCAAAGCTAGAAGGACACTaGCTCTTTTCGAACGTCCTT +
Preference number: 4 (lower is better)
Translates to: FWAVHSVQNSYCRPVYGAKLEGH*LFSNVL
Trigger: AAGGACGTTCGAAAAGAGCCAGTGTCCTTCTAGCTT...TGCACCATAGACTGGCCTACAATAACTATTCTGAACAGAATGCACTGCCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATATGGAACTGCTCCTGTaGGTGGTAAACACCCCTCTC +
Preference number: 4 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYMELLL*VVNTPL
Trigger: GAGAGGGGTGTTTACCACCCACAGGAGCAGTTCCAT...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATTGGCAGGGATACTGGTaGGTAACCAGGGATGGAACT +
Preference number: 4 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYWQGYW*VTRDGT
Trigger: AGTTCCATCCCTGGTTACCCACCAGTATCCCTGCCA...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATTCTCTTGCCTGCGGATaGGATTCTGGTCAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYSLACG*DSGQVE
Trigger: CTCAACCTGACCAGAATCCCATCCGCAGGCAAGAGA...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR CAA 72 bp GCCTGCGGATGGGATTCTGGTCAGGTTGAGTTCCATTaGGAGACAGCTCTCTCAATTAACATTACTTTCTTT +
Preference number: 4 (lower is better)
Translates to: ACGWDSGQVEFH*ETALSINITFF
Trigger: AAAGAAAGTAATGTTAATTGAGAGAGCTGTCTCCAAATGGAACTCAACCTGACCAGAATCCCATCCGCAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATTCTGCCTCAGGCAGTTaGGTCATCTTAGCCCTATCA +
Preference number: 4 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYSASGS*VILALS
Trigger: TGATAGGGCTAAGATGACTCAACTGCCTGAGGCAGA...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATAGGTTACATCGTTGCTaGGACGCCTCTCATCAATGG +
Preference number: 4 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYRLHRC*DASHQW
Trigger: CCATTGATGAGAGGCGTCTCAGCAACGATGTAACCT...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp CTACAGGAATTCACTCAGGTGGACAGATGCCTTTTTCAGCTCTATGCATCTTGTATTAATTATTTGGTCTaGAGGCCCAAGTTGCGCACT +
Preference number: 4 (lower is better)
Translates to: LQEFTQVDRCLFQLYASCINYLV*RPKLRT
Trigger: AGTGCGCAACTTGGGCCTTCAGACCAAATAATTAAT...ACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp TTCTGGGCAGTGCATTCTGTTCAGAATAGTTATTGTAGGCCAGTCTATGGTGCAAGAGAATTTTCTCCTTaGGGGCTTTCCTTTCCTACA +
Preference number: 4 (lower is better)
Translates to: FWAVHSVQNSYCRPVYGAREFSP*GLSFPT
Trigger: TGTAGGAAAGGAAAGCCCTCAAGGAGAAAATTCTCT...TGCACCATAGACTGGCCTACAATAACTATTCTGAACAGAATGCACTGCCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR GCA 90 bp CTACAGGAATTCACTCAGGTGGACAGATGCCTTTTTCAGCTCTATGCATCTTGTGAGCTTCACTTTCTTTaGGAACTTCCTCAAGTGAAG +
Preference number: 4 (lower is better)
Translates to: LQEFTQVDRCLFQLYASCELHFL*ELPQVK
Trigger: CTTCACTTGAGGAAGTTCGCAAAGAAAGTGAAGCTC...ACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR GCA 90 bp TTCTGGGCAGTGCATTCTGTTCAGAATAGTTATTGTAGGCCAGTCTATGGTGCAATCACATCAGTTGTATaGTTTAGTGGTCCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: FWAVHSVQNSYCRPVYGAITSVV*FSGPLP
Trigger: GGGCAAAGGACCACTAAAGCATACAACTGATGTGAT...TGCACCATAGACTGGCCTACAATAACTATTCTGAACAGAATGCACTGCCCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR GCA 90 bp AACTTGTTAGTCACGGATATGGAGGAGAAATTATTATGCTACCATTTAGGTCTAGCCTCGTCTGACAGCTaGACACGTTTCCTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: NLLVTDMEEKLLCYHLGLASSDS*TRFLWL
Trigger: AAGCCAGAGGAAACGTGTGCAGCTGTCAGACGAGGC...TAGACCTAAATGGTAGCATAATAATTTCTCCTCCATATCCGTGACTAACAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR GCA 90 bp GTACAATTCAACCATAAATGGAGAATGGGAGCCTCATTCTCCTGGACTTTAGTGGTTACAGTTCTAGCATaGTTACCTCTACAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: VQFNHKWRMGASFSWTLVVTVLA*LPLQAC
Trigger: GCAGGCTTGTAGAGGTAAGCATGCTAGAACTGTAAC...CACTAAAGTCCAGGAGAATGAGGCTCCCATTCTCCATTTATGGTTGAATTGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494580.1
CDS-3UTR CCA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTCTGCTGGAAGGGTTCTaGGGACAGTTTACAAGTGTG +
Preference number: 4 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCLLEGF*GQFTSV
Trigger: CACACTTGTAAACTGTCCCCAGAACCCTTCCAGCAG...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp CTACAGGAATTCACTCAGGTGGACAGATGCCTTTTTCAGCTCTATGCATCTTGTGGGGTTGTCATATTCTaGATCCCTTGTGAAGCATTT +
Preference number: 4 (lower is better)
Translates to: LQEFTQVDRCLFQLYASCGVVIF*IPCEAF
Trigger: AAATGCTTCACAAGGGATCCAGAATATGACAACCCC...ACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATTGCTGCCTGAGGTTCTaGTGGGGTTGTCATATTCTG +
Preference number: 4 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYCCLRF*WGCHIL
Trigger: CAGAATATGACAACCCCACCAGAACCTCAGGCAGCA...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp GTACAATTCAACCATAAATGGAGAATGGGAGCCTCATTCTCCTGGACTTTAGTGCCTCTACAAGCCTGCTaGTGTGTTCATGAAATATCG +
Preference number: 4 (lower is better)
Translates to: VQFNHKWRMGASFSWTLVPLQAC*CVHEIS
Trigger: CGATATTTCATGAACACACCAGCAGGCTTGTAGAGG...CACTAAAGTCCAGGAGAATGAGGCTCCCATTCTCCATTTATGGTTGAATTGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494580.1
CDS-3UTR CCA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATTTCCGTGTAAGCCCCTaGCTCGTAACTGTCCATTTC +
Preference number: 4 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYFRVSP*LVTVHF
Trigger: GAAATGGACAGTTACGAGCCAGGGGCTTACACGGAA...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp CCTCTCAGACCCTTCCCTACCTCTGGCACCTTCTTATTTGTTGTGCCTTTAGACTGTGTATTTCTTATGTaGCTCCACCGTAAGAAATAT +
Preference number: 4 (lower is better)
Translates to: PLRPFPTSGTFLFVVPLDCVFLM*LHRKKY
Trigger: ATATTTCTTACGGTGGAGCCACATAAGAAATACACA...GTCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGTCTGAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp GTACAATTCAACCATAAATGGAGAATGGGAGCCTCATTCTCCTGGACTTTAGTGGGAGCCTCATTCTCCTaGACTTTAGTGAGTTACAGT +
Preference number: 4 (lower is better)
Translates to: VQFNHKWRMGASFSWTLVGASFS*TLVSYS
Trigger: ACTGTAACTCACTAAAGTCCAGGAGAATGAGGCTCC...CACTAAAGTCCAGGAGAATGAGGCTCCCATTCTCCATTTATGGTTGAATTGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494580.1
3UTR CAA 72 bp GGCCTAACACTCAAAAGTACAGAACTCTCTAACACATaGGAAACCCAAAAGGTGAGTATGTGGCATCAGAAC +
Preference number: 4 (lower is better)
Translates to: GLTLKSTELSNT*ETQKVSMWHQN
Trigger: GTTCTGATGCCACATACTCACCTTTTGGGTTTCCAATGTGTTAGAGAGTTCTGTACTTTTGAGTGTTAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp TTCTGGGCAGTGCATTCTGTTCAGAATAGTTATTGTAGGCCAGTCTATGGTGCAATCTCAGCTTTAACTTaGCTGCAGATTTTCAGTTGG +
Preference number: 4 (lower is better)
Translates to: FWAVHSVQNSYCRPVYGAISALT*LQIFSW
Trigger: CCAACTGAAAATCTGCAGTCAAGTTAAAGCTGAGAT...TGCACCATAGACTGGCCTACAATAACTATTCTGAACAGAATGCACTGCCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTGACTCTGGATTCGGATaGTCTTGGTTGAGGCAATGT +
Preference number: 4 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCDSGFG*SWLRQC
Trigger: ACATTGCCTCAACCAAGATCATCCGAATCCAGAGTC...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTTACAGAGTACCAAATTaGGAGGCAGATGACAGTGGG +
Preference number: 4 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCYRVPN*EADDSG
Trigger: CCCACTGTCATCTGCCTCTCAATTTGGTACTCTGTA...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp GTACAATTCAACCATAAATGGAGAATGGGAGCCTCATTCTCCTGGACTTTAGTGAAAGAGTCTGACACATaGTCTATAATAGCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: VQFNHKWRMGASFSWTLVKESDT*SIIALR
Trigger: CCGCAAGGCTATTATAGATCATGTGTCAGACTCTTT...CACTAAAGTCCAGGAGAATGAGGCTCCCATTCTCCATTTATGGTTGAATTGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494580.1
CDS-3UTR TCA 90 bp CTACAGGAATTCACTCAGGTGGACAGATGCCTTTTTCAGCTCTATGCATCTTGTATCCAGGAAAGAGTCTaGCACATGATCTATAATAGC +
Preference number: 4 (lower is better)
Translates to: LQEFTQVDRCLFQLYASCIQERV*HMIYNS
Trigger: GCTATTATAGATCATGTGTCAGACTCTTTCCTGGAT...ACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATCAGAGGTGGGTGAGATaGGAACACCCTCAAAATGAA +
Preference number: 4 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYQRWVR*EHPQNE
Trigger: TTCATTTTGAGGGTGTTCTCATCTCACCCACCTCTG...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTTGTGATGGGCAGTCCTaGTTGCACTATTTTGGTAGG +
Preference number: 4 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCCDGQS*LHYFGR
Trigger: CCTACCAAAATAGTGCAATCAGGACTGCCCATCACA...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR GCA 90 bp TTCTGGGCAGTGCATTCTGTTCAGAATAGTTATTGTAGGCCAGTCTATGGTGCATCTGAAGGCCCAAGTTaGGCACTTAATTGTATATTC +
Preference number: 4 (lower is better)
Translates to: FWAVHSVQNSYCRPVYGASEGPS*ALNCIF
Trigger: GAATATACAATTAAGTGCGCAACTTGGGCCTTCAGA...TGCACCATAGACTGGCCTACAATAACTATTCTGAACAGAATGCACTGCCCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR GCA 90 bp CTACAGGAATTCACTCAGGTGGACAGATGCCTTTTTCAGCTCTATGCATCTTGTATGGGCAGTCCTGATTaGACTATTTTGGTAGGAAAT +
Preference number: 4 (lower is better)
Translates to: LQEFTQVDRCLFQLYASCMGSPD*TILVGN
Trigger: ATTTCCTACCAAAATAGTGCAATCAGGACTGCCCAT...ACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp TTCTGGGCAGTGCATTCTGTTCAGAATAGTTATTGTAGGCCAGTCTATGGTGCATTTACAAGATGGATCTaGGCACTGATTAGCAATCTG +
Preference number: 4 (lower is better)
Translates to: FWAVHSVQNSYCRPVYGAFTRWI*ALISNL
Trigger: CAGATTGCTAATCAGTGCCCAGATCCATCTTGTAAA...TGCACCATAGACTGGCCTACAATAACTATTCTGAACAGAATGCACTGCCCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp CTACAGGAATTCACTCAGGTGGACAGATGCCTTTTTCAGCTCTATGCATCTTGTATAAACAGGACTCTCTaGCCTCTCCTGTGTTTATTT +
Preference number: 4 (lower is better)
Translates to: LQEFTQVDRCLFQLYASCINRTL*PLLCLF
Trigger: AAATAAACACAGGAGAGGCCAGAGAGTCCTGTTTAT...ACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp CTACAGGAATTCACTCAGGTGGACAGATGCCTTTTTCAGCTCTATGCATCTTGTAAAAAGGCTTCTTGGTaGTCACAGAGTTACAGAGTA +
Preference number: 4 (lower is better)
Translates to: LQEFTQVDRCLFQLYASCKKASW*SQSYRV
Trigger: TACTCTGTAACTCTGTGACCACCAAGAAGCCTTTTT...ACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTTGCCTGAGGTTCTGGTaGGGTTGTCATATTCTGGAT +
Preference number: 4 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCCLRFW*GCHILD
Trigger: ATCCAGAATATGACAACCCCACCAGAACCTCAGGCA...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp CTACAGGAATTCACTCAGGTGGACAGATGCCTTTTTCAGCTCTATGCATCTTGTACATCTTCCAAGATATaGCTTTCAGATACAGCAAGG +
Preference number: 4 (lower is better)
Translates to: LQEFTQVDRCLFQLYASCTSSKI*LSDTAR
Trigger: CCTTGCTGTATCTGAAAGCCATATCTTGGAAGATGT...ACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp TTCTGGGCAGTGCATTCTGTTCAGAATAGTTATTGTAGGCCAGTCTATGGTGCATGTTGGCAACATTTTTaGGAGACTCAAATGTCCTTT +
Preference number: 4 (lower is better)
Translates to: FWAVHSVQNSYCRPVYGACWQHF*ETQMSF
Trigger: AAAGGACATTTGAGTCTCTCAAAAATGTTGCCAACA...TGCACCATAGACTGGCCTACAATAACTATTCTGAACAGAATGCACTGCCCAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp CTACAGGAATTCACTCAGGTGGACAGATGCCTTTTTCAGCTCTATGCATCTTGTTTAACTATTAGGTGCTaGCCATACAGAAATGACAGT +
Preference number: 4 (lower is better)
Translates to: LQEFTQVDRCLFQLYASCLTIRC*PYRNDS
Trigger: ACTGTCATTTCTGTATGGTCAGCACCTAATAGTTAA...ACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATAAATTGAGAGGCAGATaGCAGTGGGGCAGTCAATTT +
Preference number: 4 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYKLRGR*QWGSQF
Trigger: AAATTGACTGCCCCACTGTCATCTGCCTCTCAATTT...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp CTACAGGAATTCACTCAGGTGGACAGATGCCTTTTTCAGCTCTATGCATCTTGTGCAATTTCATCTCTCTaGTTTGGAGATTTTAAGTCC +
Preference number: 4 (lower is better)
Translates to: LQEFTQVDRCLFQLYASCAISSL*FGDFKS
Trigger: GGACTTAAAATCTCCAAATCAGAGAGATGAAATTGC...ACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp TTATTTAGGTACAATTCAACCATAAATGGAGAATGGGAGCCTCATTCTCCTGGAGTTGTTCATGTACTCTaGAAGCAGATCCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: LFRYNSTINGEWEPHSPGVVHVL*KQILKS
Trigger: GCTCTTCAGGATCTGCTTTCAGAGTACATGAACAAC...TCCAGGAGAATGAGGCTCCCATTCTCCATTTATGGTTGAATTGTACCTAAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494580.1
CDS-3UTR TCA 90 bp TTCTGGGCAGTGCATTCTGTTCAGAATAGTTATTGTAGGCCAGTCTATGGTGCAGAGATGTCCACAAATTaGTTATCATCCAACACATTC +
Preference number: 4 (lower is better)
Translates to: FWAVHSVQNSYCRPVYGAEMSTN*LSSNTF
Trigger: GAATGTGTTGGATGATAATCAATTTGTGGACATCTC...TGCACCATAGACTGGCCTACAATAACTATTCTGAACAGAATGCACTGCCCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTCTCTCCCCTCATCTATaGAAGCTAAATGCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCLSPHL*KLNASA
Trigger: TGCAGAAGCATTTAGCTTTCATAGATGAGGGGAGAG...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATACACAGATGGGGAACTaGTGTGACATACCTAAGGTT +
Preference number: 4 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYTQMGN*CDIPKV
Trigger: AACCTTAGGTATGTCACATCAGTTCCCCATCTGTGT...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR GCA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTTTCAGGCACATACTATaGACACGTGTGACCTCCATA +
Preference number: 4 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCFRHIL*TRVTSI
Trigger: TATGGAGGTCACACGTGTGCATAGTATGTGCCTGAA...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATCCTCTACAAGCCTGCTaGTGTGTTCATGAAATATCG +
Preference number: 4 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYPLQAC*CVHEIS
Trigger: CGATATTTCATGAACACACCAGCAGGCTTGTAGAGG...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp AACTTGTTAGTCACGGATATGGAGGAGAAATTATTATGCTACCATTTAGGTCTAATCCTCCAGTTCCTCTaGGGTCCGAATCATCATGAC +
Preference number: 4 (lower is better)
Translates to: NLLVTDMEEKLLCYHLGLILQFL*GPNHHD
Trigger: GTCATGATGATTCGGACCCCAGAGGAACTGGAGGAT...TAGACCTAAATGGTAGCATAATAATTTCTCCTCCATATCCGTGACTAACAAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp TTATTTAGGTACAATTCAACCATAAATGGAGAATGGGAGCCTCATTCTCCTGGAACCATAAATGGAGAATaGGAGCCTCATTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: LFRYNSTINGEWEPHSPGTINGE*EPHSPG
Trigger: TCCAGGAGAATGAGGCTCCCATTCTCCATTTATGGT...TCCAGGAGAATGAGGCTCCCATTCTCCATTTATGGTTGAATTGTACCTAAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494580.1
CDS-3UTR TCA 90 bp AACTTGTTAGTCACGGATATGGAGGAGAAATTATTATGCTACCATTTAGGTCTAGTTGCAAGAGGCACATaGCATCAATCATGTCCGCAA +
Preference number: 4 (lower is better)
Translates to: NLLVTDMEEKLLCYHLGLVARGT*HQSCPQ
Trigger: TTGCGGACATGATTGATGTCATGTGCCTCTTGCAAC...TAGACCTAAATGGTAGCATAATAATTTCTCCTCCATATCCGTGACTAACAAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTAAAGAGTCTGACACATaGTCTATAATAGCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCKESDT*SIIALR
Trigger: CCGCAAGGCTATTATAGATCATGTGTCAGACTCTTT...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp TTATTTAGGTACAATTCAACCATAAATGGAGAATGGGAGCCTCATTCTCCTGGACTGCTGGTGTGTTCATaGAATATCGCAGCATATTCT +
Preference number: 4 (lower is better)
Translates to: LFRYNSTINGEWEPHSPGLLVCS*NIAAYS
Trigger: AGAATATGCTGCGATATTTCATGAACACACCAGCAG...TCCAGGAGAATGAGGCTCCCATTCTCCATTTATGGTTGAATTGTACCTAAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494580.1
CDS-3UTR TCA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTTGCTTTGAGCTAAGCTaGAAATCTGCCTGGGTTAAA +
Preference number: 4 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCCFELS*KSAWVK
Trigger: TTTAACCCAGGCAGATTTTCAGCTTAGCTCAAAGCA...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp AACTTGTTAGTCACGGATATGGAGGAGAAATTATTATGCTACCATTTAGGTCTAAGAACACCCTCAAAATaGAGGTTCAGGAAGCCGTTG +
Preference number: 4 (lower is better)
Translates to: NLLVTDMEEKLLCYHLGLRTPSK*RFRKPL
Trigger: CAACGGCTTCCTGAACCTTCATTTTGAGGGTGTTCT...TAGACCTAAATGGTAGCATAATAATTTCTCCTCCATATCCGTGACTAACAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTAAGCCAGTGAGACTTTaGGCAAGATTCTTATCCCAT +
Preference number: 4 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCKPVRL*ARFLSH
Trigger: ATGGGATAAGAATCTTGCTCAAAGTCTCACTGGCTT...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR GCA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATTTCTGCCTGGTTAGGTaGCAGGTTAGATCAGATAAA +
Preference number: 4 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYFCLVR*QVRSDK
Trigger: TTTATCTGATCTAACCTGGCACCTAACCAGGCAGAA...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR GCA 90 bp CTACAGGAATTCACTCAGGTGGACAGATGCCTTTTTCAGCTCTATGCATCTTGTTTCATTGCCATTAACTaGTTCATAGTTCAATGGTAC +
Preference number: 4 (lower is better)
Translates to: LQEFTQVDRCLFQLYASCFIAIN*FIVQWY
Trigger: GTACCATTGAACTATGAAGCAGTTAATGGCAATGAA...ACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR GCA 90 bp TTCTGGGCAGTGCATTCTGTTCAGAATAGTTATTGTAGGCCAGTCTATGGTGCACTTTTCTATGTTTCATaGATCCTTTTACCCAAACTG +
Preference number: 4 (lower is better)
Translates to: FWAVHSVQNSYCRPVYGALFYVS*ILLPKL
Trigger: CAGTTTGGGTAAAAGGATGCATGAAACATAGAAAAG...TGCACCATAGACTGGCCTACAATAACTATTCTGAACAGAATGCACTGCCCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR GCA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTTTCTGGTGCCTGCTTTaGCAACCTAAAGAACTACTT +
Preference number: 4 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCFWCLL*QPKELL
Trigger: AAGTAGTTCTTTAGGTTGGCAAAGCAGGCACCAGAA...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp TTCTGGGCAGTGCATTCTGTTCAGAATAGTTATTGTAGGCCAGTCTATGGTGCAAGCATTAATAATCTGTaGACACAAGGTTTCCAAATG +
Preference number: 4 (lower is better)
Translates to: FWAVHSVQNSYCRPVYGASINNL*TQGFQM
Trigger: CATTTGGAAACCTTGTGTCCACAGATTATTAATGCT...TGCACCATAGACTGGCCTACAATAACTATTCTGAACAGAATGCACTGCCCAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp AACTTGTTAGTCACGGATATGGAGGAGAAATTATTATGCTACCATTTAGGTCTACACTGCCTTTTCTTCTaGGCAGTGCATTCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: NLLVTDMEEKLLCYHLGLHCLFF*AVHSVQ
Trigger: CTGAACAGAATGCACTGCCCAGAAGAAAAGGCAGTG...TAGACCTAAATGGTAGCATAATAATTTCTCCTCCATATCCGTGACTAACAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTCTAAACTCCAACATGTaGAAAGATGATGTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCLNSNM*KDDVGS
Trigger: GGACCCAACATCATCTTTCCACATGTTGGAGTTTAG...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTTTCAAATTCAGATTCTaGTGCCTGCTTTGCCAACCT +
Preference number: 4 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCFKFRF*CLLCQP
Trigger: AGGTTGGCAAAGCAGGCACCAGAATCTGAATTTGAA...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR CAA 72 bp TCAGGTGGACAGATGCCTTTTTCAGCTCTATGCATCTaGTTTTTATGTCACTATCGATTACCACAGCAGATT +
Preference number: 4 (lower is better)
Translates to: SGGQMPFSALCI*FLCHYRLPQQI
Trigger: AATCTGCTGTGGTAATCGATAGTGACATAAAAACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp AACTTGTTAGTCACGGATATGGAGGAGAAATTATTATGCTACCATTTAGGTCTATGTCCTTTGAAAAGCTaGCACATGTTGCAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: NLLVTDMEEKLLCYHLGLCPLKS*HMLQEA
Trigger: TGCCTCTTGCAACATGTGTCAGCTTTTCAAAGGACA...TAGACCTAAATGGTAGCATAATAATTTCTCCTCCATATCCGTGACTAACAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp AACTTGTTAGTCACGGATATGGAGGAGAAATTATTATGCTACCATTTAGGTCTAGTTGTTCATGTACTCTaGAAGCAGATCCTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: NLLVTDMEEKLLCYHLGLVVHVL*KQILKS
Trigger: GCTCTTCAGGATCTGCTTTCAGAGTACATGAACAAC...TAGACCTAAATGGTAGCATAATAATTTCTCCTCCATATCCGTGACTAACAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp TTATTTAGGTACAATTCAACCATAAATGGAGAATGGGAGCCTCATTCTCCTGGAATCCAGGAAAGAGTCTaGCACATGATCTATAATAGC +
Preference number: 4 (lower is better)
Translates to: LFRYNSTINGEWEPHSPGIQERV*HMIYNS
Trigger: GCTATTATAGATCATGTGTCAGACTCTTTCCTGGAT...TCCAGGAGAATGAGGCTCCCATTCTCCATTTATGGTTGAATTGTACCTAAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494580.1
CDS-3UTR TCA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATCACAAGGTTTCCAAATaGTTGGCTGCAATTTTGACA +
Preference number: 4 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYHKVSK*LAAILT
Trigger: TGTCAAAATTGCAGCCAATCATTTGGAAACCTTGTG...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATCTGTTTATTCTGCAATaGGTTCACAAGAGAATGGTG +
Preference number: 4 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYLFILQ*VHKRMV
Trigger: CACCATTCTCTTGTGAACTCATTGCAGAATAAACAG...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTATACTGAAGATGGGCTaGAACAGGCATTTCATTGAA +
Preference number: 4 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCILKMG*NRHFIE
Trigger: TTCAATGAAATGCCTGTTTCAGCCCATCTTCAGTAT...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp AACTTGTTAGTCACGGATATGGAGGAGAAATTATTATGCTACCATTTAGGTCTACAGAGCAGGGTGAAATaGACAAGCAAGATAGTCAGA +
Preference number: 4 (lower is better)
Translates to: NLLVTDMEEKLLCYHLGLQSRVK*TSKIVR
Trigger: TCTGACTATCTTGCTTGTTCATTTCACCCTGCTCTG...TAGACCTAAATGGTAGCATAATAATTTCTCCTCCATATCCGTGACTAACAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR GCA 90 bp AACTTGTTAGTCACGGATATGGAGGAGAAATTATTATGCTACCATTTAGGTCTACCACCTCTACAAGCCTaGTGGTGTGTTCATGAAATA +
Preference number: 4 (lower is better)
Translates to: NLLVTDMEEKLLCYHLGLPPLQA*WCVHEI
Trigger: TATTTCATGAACACACCAGCAGGCTTGTAGAGGTGG...TAGACCTAAATGGTAGCATAATAATTTCTCCTCCATATCCGTGACTAACAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR GCA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTCATTCAATGAGCTTTTaGTTAAGGCTTCCAAGGCAA +
Preference number: 4 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCHSMSF*LRLPRQ
Trigger: TTGCCTTGGAAGCCTTAAGCAAAAGCTCATTGAATG...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR GCA 90 bp TTATTTAGGTACAATTCAACCATAAATGGAGAATGGGAGCCTCATTCTCCTGGATTACCTCTACAAGCCTaGTGGTGTGTTCATGAAATA +
Preference number: 4 (lower is better)
Translates to: LFRYNSTINGEWEPHSPGLPLQA*WCVHEI
Trigger: TATTTCATGAACACACCAGCAGGCTTGTAGAGGTAA...TCCAGGAGAATGAGGCTCCCATTCTCCATTTATGGTTGAATTGTACCTAAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494580.1
CDS-3UTR CCA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTAATGAACACAGTGACTaGAGTTGTAAAATGACCCCA +
Preference number: 4 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCNEHSD*SCKMTP
Trigger: TGGGGTCATTTTACAACTCCAGTCACTGTGTTCATT...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATGGAGAGAGATATTTTTaGTTCACAGAAGAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYGERYF*FTEEER
Trigger: CCTTTCCTCTTCTGTGAACCAAAAATATCTCTCTCC...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp AACTTGTTAGTCACGGATATGGAGGAGAAATTATTATGCTACCATTTAGGTCTAACCCTTCCCTACCTCTaGCACCTTCTTATTTGTTGT +
Preference number: 4 (lower is better)
Translates to: NLLVTDMEEKLLCYHLGLTLPYL*HLLICC
Trigger: ACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGT...TAGACCTAAATGGTAGCATAATAATTTCTCCTCCATATCCGTGACTAACAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTGGTAATTTACACAGATaGGGAACTGATGTGACATAC +
Preference number: 4 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCGNLHR*GTDVTY
Trigger: GTATGTCACATCAGTTCCCCATCTGTGTAAATTACC...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp TTATTTAGGTACAATTCAACCATAAATGGAGAATGGGAGCCTCATTCTCCTGGACAATTCAACCATAAATaGAGAATGGGAGCCTCATTC +
Preference number: 4 (lower is better)
Translates to: LFRYNSTINGEWEPHSPGQFNHK*RMGASF
Trigger: GAATGAGGCTCCCATTCTCCATTTATGGTTGAATTG...TCCAGGAGAATGAGGCTCCCATTCTCCATTTATGGTTGAATTGTACCTAAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494580.1
3UTR CAA 72 bp CCTGGGTTAAAGAGGAGAACTTGTTCACATCTCACTTaGGGTAAAAAGTCATTTTTATCAAAGAGATGGAGG +
Preference number: 4 (lower is better)
Translates to: PGLKRRTCSHLT*GKKSFLSKRWR
Trigger: CCTCCATCTCTTTGATAAAAATGACTTTTTACCCAAAGTGAGATGTGAACAAGTTCTCCTCTTTAACCCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATACATTGAGAGCATTCTaGATTTCTTCACAAACTGTG +
Preference number: 4 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYTLRAF*ISSQTV
Trigger: CACAGTTTGTGAAGAAATTCAGAATGCTCTCAATGT...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTCCGAATCATCATGACTaGACATCTGATATCATGAAT +
Preference number: 4 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCPNHHD*TSDIMN
Trigger: ATTCATGATATCAGATGTTCAGTCATGATGATTCGG...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATCAGCTGGTAGTTTGGTaGTTAAAAGAAAATTCCTCT +
Preference number: 4 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYQLVVW*LKENSS
Trigger: AGAGGAATTTTCTTTTAATCACCAAACTACCAGCTG...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR GCA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTGCCAAAGCACAAAACTaGTTTGAACTGGTCATTAAT +
Preference number: 4 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCAKAQN*FELVIN
Trigger: ATTAATGACCAGTTCAAAGCAGTTTTGTGCTTTGGC...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATCTTCATTTGTTGACATaGAACAAGCAAGATTTGCCA +
Preference number: 4 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYLHLLT*NKQDLP
Trigger: TGGCAAATCTTGCTTGTTCCATGTCAACAAATGAAG...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATCAAAAGGTACATAGGTaGATCACCAAATTATCACTC +
Preference number: 4 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYQKVHR*ITKLSL
Trigger: GAGTGATAATTTGGTGATCCACCTATGTACCTTTTG...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp AACTTGTTAGTCACGGATATGGAGGAGAAATTATTATGCTACCATTTAGGTCTAGATCGATATTCAATGTaGTTGGTGTTTCAGCTGACA +
Preference number: 4 (lower is better)
Translates to: NLLVTDMEEKLLCYHLGLDRYSM*LVFQLT
Trigger: TGTCAGCTGAAACACCAATCACATTGAATATCGATC...TAGACCTAAATGGTAGCATAATAATTTCTCCTCCATATCCGTGACTAACAAGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp AACTTGTTAGTCACGGATATGGAGGAGAAATTATTATGCTACCATTTAGGTCTATCGGATGATCTTGGTTaGGGCAATGTAAGACATTTT +
Preference number: 4 (lower is better)
Translates to: NLLVTDMEEKLLCYHLGLSDDLG*GNVRHF
Trigger: AAAATGTCTTACATTGCCTCAACCAAGATCATCCGA...TAGACCTAAATGGTAGCATAATAATTTCTCCTCCATATCCGTGACTAACAAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR TCA 90 bp AACTTGTTAGTCACGGATATGGAGGAGAAATTATTATGCTACCATTTAGGTCTAAGTCCTGCTGACGTTTaGAGGCTAAATAATCCAAAT +
Preference number: 4 (lower is better)
Translates to: NLLVTDMEEKLLCYHLGLSPADV*RLNNPN
Trigger: ATTTGGATTATTTAGCCTTCAAACGTCAGCAGGACT...TAGACCTAAATGGTAGCATAATAATTTCTCCTCCATATCCGTGACTAACAAGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR GCA 90 bp AACTTGTTAGTCACGGATATGGAGGAGAAATTATTATGCTACCATTTAGGTCTATTTCAGCTGACATGCTaGCTTTCTGTTTCTTCCTAT +
Preference number: 4 (lower is better)
Translates to: NLLVTDMEEKLLCYHLGLFQLTC*LSVSSY
Trigger: ATAGGAAGAAACAGAAAGGCAGCATGTCAGCTGAAA...TAGACCTAAATGGTAGCATAATAATTTCTCCTCCATATCCGTGACTAACAAGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTTGCTTCATAGTTCAATaGTACAGTTCATGCAGTTAT +
Preference number: 4 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCCFIVQ*YSSCSY
Trigger: ATAACTGCATGAACTGTACCATTGAACTATGAAGCA...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATTCATTAAGAAATTTCTaGCAATCCTCTGCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYSLRNF*QSSAEE
Trigger: TTCTTCTGCAGAGGATTGCCAGAAATTTCTTAATGA...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp AACTTGTTAGTCACGGATATGGAGGAGAAATTATTATGCTACCATTTAGGTCTATTCACAAGAGAATGGTaGATATCACCAGGAAAAGTC +
Preference number: 4 (lower is better)
Translates to: NLLVTDMEEKLLCYHLGLFTREW*ISPGKV
Trigger: GACTTTTCCTGGTGATATCCACCATTCTCTTGTGAA...TAGACCTAAATGGTAGCATAATAATTTCTCCTCCATATCCGTGACTAACAAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATCAGCTTCCTTGTCTGTaGAATGATATATATCCTATA +
Preference number: 4 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYQLPCL*NDIYPI
Trigger: TATAGGATATATATCATTCCACAGACAAGGAAGCTG...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CCA 90 bp AACTTGTTAGTCACGGATATGGAGGAGAAATTATTATGCTACCATTTAGGTCTAGAAAACAGGGGCATCTaGAAATCTTTCTCTAGAAGT +
Preference number: 4 (lower is better)
Translates to: NLLVTDMEEKLLCYHLGLENRGI*KSFSRS
Trigger: ACTTCTAGAGAAAGATTTCCAGATGCCCCTGTTTTC...TAGACCTAAATGGTAGCATAATAATTTCTCCTCCATATCCGTGACTAACAAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
3UTR CAA 72 bp ATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATaGAATATCAATCCATGTGTTTTGTTCCCACAAACC +
Preference number: 4 (lower is better)
Translates to: IVSIFLQLTKLI*NINPCVLFPQT
Trigger: GGTTTGTGGGAACAAAACACATGGATTGATATTCAATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR GCA 90 bp AACTTGTTAGTCACGGATATGGAGGAGAAATTATTATGCTACCATTTAGGTCTATCTGACTTACTCCTTTaGTTTACTAATAAACACTCC +
Preference number: 4 (lower is better)
Translates to: NLLVTDMEEKLLCYHLGLSDLLL*FTNKHS
Trigger: GGAGTGTTTATTAGTAAAGCAAAGGAGTAAGTCAGA...TAGACCTAAATGGTAGCATAATAATTTCTCCTCCATATCCGTGACTAACAAGTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS CCA 90 bp CGCGGTACGGGGCTCTCCTGCCTTCTGGGCTCCAACGCAGCTCTGTaGCTGAACTGGGTGCTCATCACGGGAACTGCTGGGGTATGGAAT +
Preference number: 5 (lower is better)
Translates to: RGTGLSCLLGSNAAL*LNWVLITGTAGVWN
Trigger: ATTCCATACCCCAGCAGTTCCCGTGATGAGCACCCAGTTCAGCCACAGAGCTGCGTTGGAGCCCAGAAGGCAGGAGAGCCCCGTACCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682166.1
CDS GCA 90 bp CGAGCAGCTTTCAGAATGACAGTCTGCAGAAGTGAGCTGAGCGTGTaGGCGGTACGGGGCTCTCCTGCCTTCTGGGCTCCAACGCAGCTC +
Preference number: 5 (lower is better)
Translates to: RAAFRMTVCRSELSV*AVRGSPAFWAPTQL
Trigger: GAGCTGCGTTGGAGCCCAGAAGGCAGGAGAGCCCCGTACCGCGCACACGCTCAGCTCACTTCTGCAGACTGTCATTCTGAAAGCTGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682166.1
CDS TCA 90 bp GTACGGGGCTCTCCTGCCTTCTGGGCTCCAACGCAGCTCTGTGGCTaGACTGGGTGCTCATCACGGGAACTGCTGGGGTATGGAATACAG +
Preference number: 5 (lower is better)
Translates to: VRGSPAFWAPTQLCG*TGCSSRELLGYGIQ
Trigger: CTGTATTCCATACCCCAGCAGTTCCCGTGATGAGCACCCAGTTCAGCCACAGAGCTGCGTTGGAGCCCAGAAGGCAGGAGAGCCCCGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682166.1
CDS TCA 90 bp CAAAGCAACAGTCCGAGCAGCTTTCAGAATGACAGTCTGCAGAAGTaGGCTGAGCGTGTGCGCGGTACGGGGCTCTCCTGCCTTCTGGGC +
Preference number: 5 (lower is better)
Translates to: QSNSPSSFQNDSLQK*AERVRGTGLSCLLG
Trigger: GCCCAGAAGGCAGGAGAGCCCCGTACCGCGCACACGCTCAGCTCACTTCTGCAGACTGTCATTCTGAAAGCTGCTCGGACTGTTGCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682166.1
CDS CCA 90 bp GGGCTCTCCTGCCTTCTGGGCTCCAACGCAGCTCTGTGGCTGAACTaGGTGCTCATCACGGGAACTGCTGGGGTATGGAATACAGATGTG +
Preference number: 5 (lower is better)
Translates to: GLSCLLGSNAALWLN*VLITGTAGVWNTDV
Trigger: CACATCTGTATTCCATACCCCAGCAGTTCCCGTGATGAGCACCCAGTTCAGCCACAGAGCTGCGTTGGAGCCCAGAAGGCAGGAGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682166.1
CDS GCA 90 bp CTCCAACGCAGCTCTGTGGCTGAACTGGGTGCTCATCACGGGAACTaGTGGGGTATGGAATACAGATGTGGCAGCTCAGGTAGCCCCAAA +
Preference number: 5 (lower is better)
Translates to: LQRSSVAELGAHHGN*WGMEYRCGSSGSPK
Trigger: TTTGGGGCTACCTGAGCTGCCACATCTGTATTCCATACCCCAGCAGTTCCCGTGATGAGCACCCAGTTCAGCCACAGAGCTGCGTTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682166.1
CDS GCA 90 bp ACTGAAACCAAAGCAACAGTCCGAGCAGCTTTCAGAATGACAGTCTaGAGAAGTGAGCTGAGCGTGTGCGCGGTACGGGGCTCTCCTGCC +
Preference number: 5 (lower is better)
Translates to: TETKATVRAAFRMTV*RSELSVCAVRGSPA
Trigger: GGCAGGAGAGCCCCGTACCGCGCACACGCTCAGCTCACTTCTGCAGACTGTCATTCTGAAAGCTGCTCGGACTGTTGCTTTGGTTTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682166.1
CDS CCA 90 bp CAACGCAGCTCTGTGGCTGAACTGGGTGCTCATCACGGGAACTGCTaGGGTATGGAATACAGATGTGGCAGCTCAGGTAGCCCCAAATTG +
Preference number: 5 (lower is better)
Translates to: QRSSVAELGAHHGNC*GMEYRCGSSGSPKL
Trigger: CAATTTGGGGCTACCTGAGCTGCCACATCTGTATTCCATACCCCAGCAGTTCCCGTGATGAGCACCCAGTTCAGCCACAGAGCTGCGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682166.1
CDS CCA 90 bp GCTCTGTGGCTGAACTGGGTGCTCATCACGGGAACTGCTGGGGTATaGAATACAGATGTGGCAGCTCAGGTAGCCCCAAATTGCGTTGTT +
Preference number: 5 (lower is better)
Translates to: ALWLNWVLITGTAGV*NTDVAAQVAPNCVV
Trigger: AACAACGCAATTTGGGGCTACCTGAGCTGCCACATCTGTATTCCATACCCCAGCAGTTCCCGTGATGAGCACCCAGTTCAGCCACAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682166.1
CDS-3UTR CAA 90 bp TCTCAGAATAAAACTTATGGTCGGCCCCACAGCCCATCTCTTGCCTGCGGATGGACGGAAAAAGGCTTCTaGGTGGTCACAGAGTTACAG +
Preference number: 5 (lower is better)
Translates to: SQNKTYGRPHSPSLACGWTEKGF*VVTELQ
Trigger: CTGTAACTCTGTGACCACCAAGAAGCCTTTTTCCGT...CCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTCTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CAA 90 bp TCTCAGAATAAAACTTATGGTCGGCCCCACAGCCCATCTCTTGCCTGCGGATGGAGGTTCAGGAAGCCGTaGAAGTCACTTACTCTGTTG +
Preference number: 5 (lower is better)
Translates to: SQNKTYGRPHSPSLACGWRFRKP*KSLTLL
Trigger: CAACAGAGTAAGTGACTTCAACGGCTTCCTGAACCT...CCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CAA 90 bp CTACAGGAATTCACTCAGGTGGACAGATGCCTTTTTCAGCTCTATGCATCTTGTCCCACAGCCCATCTCTaGCCTGCGGATGGGATTCTG +
Preference number: 5 (lower is better)
Translates to: LQEFTQVDRCLFQLYASCPTAHL*PADGIL
Trigger: CAGAATCCCATCCGCAGGCAAGAGATGGGCTGTGGG...ACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS TCA 90 bp TGGGTGCCGGGGCCCAGCAGGACTCTGGATTCGGATGATCTTGGTTaGGGCAATGTAAGACATTTTCACTGTTTGCACTACAGCATTCAT +
Preference number: 5 (lower is better)
Translates to: WVPGPSRTLDSDDLG*GNVRHFHCLHYSIH
Trigger: ATGAATGCTGTAGTGCAAACAGTGAAAATGTCTTACATTGCCTCAACCAAGATCATCCGAATCCAGAGTCCTGCTGGGCCCCGGCACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000373735.2
ENST00000433211.7
ENST00000682758.1
ENST00000682945.1
ENST00000683963.1
ENST00000684154.1
CDS TCA 90 bp ACATCACAACTGGGTGCCGGGGCCCAGCAGGACTCTGGATTCGGATaGTCTTGGTTGAGGCAATGTAAGACATTTTCACTGTTTGCACTA +
Preference number: 5 (lower is better)
Translates to: TSQLGAGAQQDSGFG*SWLRQCKTFSLFAL
Trigger: TAGTGCAAACAGTGAAAATGTCTTACATTGCCTCAACCAAGATCATCCGAATCCAGAGTCCTGCTGGGCCCCGGCACCCAGTTGTGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000373735.2
ENST00000433211.7
ENST00000682758.1
ENST00000682945.1
ENST00000683963.1
ENST00000684154.1
CDS TCA 90 bp ATTAAATTCTCCAGCTCATCAAGGGCACTTCCCAGGGTTGCTGCCTaGGGTTCTGGTGGGGTTGTCATATTCTGGATCCCTTGTGAAGCA +
Preference number: 5 (lower is better)
Translates to: IKFSSSSRALPRVAA*GSGGVVIFWIPCEA
Trigger: TGCTTCACAAGGGATCCAGAATATGACAACCCCACCAGAACCTCAGGCAGCAACCCTGGGAAGTGCCCTTGATGAGCTGGAGAATTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000433211.7
ENST00000545309.3
ENST00000682166.1
ENST00000682758.1
ENST00000682945.1
ENST00000683272.1
ENST00000683624.1
ENST00000683630.1
ENST00000683771.1
ENST00000683963.1
ENST00000684154.1
CDS-3UTR CAA 90 bp CTACAGGAATTCACTCAGGTGGACAGATGCCTTTTTCAGCTCTATGCATCTTGTCAAGGCACGGGCAGCTaGAACCACAGCCTCCCTTTT +
Preference number: 5 (lower is better)
Translates to: LQEFTQVDRCLFQLYASCQGTGS*NHSLPF
Trigger: AAAAGGGAGGCTGTGGTTCAAGCTGCCCGTGCCTTG...ACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CAA 90 bp CCTCTCAGACCCTTCCCTACCTCTGGCACCTTCTTATTTGTTGTGCCTTTAGACTGCTTTAGTGGTCCTTaGCCCCTAGTGAAGTCTGTC +
Preference number: 5 (lower is better)
Translates to: PLRPFPTSGTFLFVVPLDCFSGP*PLVKSV
Trigger: GACAGACTTCACTAGGGGCAAAGGACCACTAAAGCA...GTCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGTCTGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CAA 90 bp CTACAGGAATTCACTCAGGTGGACAGATGCCTTTTTCAGCTCTATGCATCTTGTGCCTGGCGAATGGCGTaGCATTCTGCGATAATCCGC +
Preference number: 5 (lower is better)
Translates to: LQEFTQVDRCLFQLYASCAWRMA*HSAIIR
Trigger: GCGGATTATCGCAGAATGCAACGCCATTCGCCAGGC...ACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CAA 90 bp CCTCTCAGACCCTTCCCTACCTCTGGCACCTTCTTATTTGTTGTGCCTTTAGACCTTGACTTTTGGGTCTaGCAGCCAAAGCAAGTGCAG +
Preference number: 5 (lower is better)
Translates to: PLRPFPTSGTFLFVVPLDLDFWV*QPKQVQ
Trigger: CTGCACTTGCTTTGGCTGCAAGACCCAAAAGTCAAG...GTCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGTCTGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS TCA 90 bp GGCTCCAGTAGCTTCTCCACGGTGAATGTTTGGACCTGCAGATCCTaGGGATCGATATTCAATGTGATTGGTGTTTCAGCTGACATGCTG +
Preference number: 5 (lower is better)
Translates to: GSSSFSTVNVWTCRS*GSIFNVIGVSADML
Trigger: CAGCATGTCAGCTGAAACACCAATCACATTGAATATCGATCCTCAGGATCTGCAGGTCCAAACATTCACCGTGGAGAAGCTACTGGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000330298.6
ENST00000433211.7
ENST00000545309.3
ENST00000682166.1
ENST00000682505.1
ENST00000682758.1
ENST00000682945.1
ENST00000683272.1
ENST00000683624.1
ENST00000683630.1
ENST00000683963.1
CDS TCA 90 bp CGGAAAAAGGCTTCTTGGTGGTCACAGAGTTACAGAGTACCAAATTaGGAGGCAGATGACAGTGGGGCAGTCAATTTCGCTGAGCGTTGT +
Preference number: 5 (lower is better)
Translates to: RKKASWWSQSYRVPN*EADDSGAVNFAERC
Trigger: ACAACGCTCAGCGAAATTGACTGCCCCACTGTCATCTGCCTCTCAATTTGGTACTCTGTAACTCTGTGACCACCAAGAAGCCTTTTTCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS GCA 90 bp AGGGAAGCAACATCAGAATGCTCCAAACAAGCTGAACAAATTGAATaGAAGAGGGGAGAGTTCTCCTTCAGTGAAGCTCGGGCTCCTGCA +
Preference number: 5 (lower is better)
Translates to: REATSECSKQAEQIE*KRGEFSFSEARAPA
Trigger: TGCAGGAGCCCGAGCTTCACTGAAGGAGAACTCTCCCCTCTTGCATTCAATTTGTTCAGCTTGTTTGGAGCATTCTGATGTTGCTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000433211.7
ENST00000545309.3
ENST00000682166.1
ENST00000682758.1
ENST00000682945.1
ENST00000683272.1
ENST00000683624.1
ENST00000683630.1
ENST00000683771.1
ENST00000683963.1
ENST00000684154.1
CDS-3UTR CAA 90 bp CTACAGGAATTCACTCAGGTGGACAGATGCCTTTTTCAGCTCTATGCATCTTGTCTCCACGGTGAATGTTaGGACCTGCAGATCCTGAGG +
Preference number: 5 (lower is better)
Translates to: LQEFTQVDRCLFQLYASCLHGEC*DLQILR
Trigger: CCTCAGGATCTGCAGGTCCAAACATTCACCGTGGAG...ACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CAA 90 bp TCTCAGAATAAAACTTATGGTCGGCCCCACAGCCCATCTCTTGCCTGCGGATGGAGAGCTTCACTTTCTTaGCGAACTTCCTCAAGTGAA +
Preference number: 5 (lower is better)
Translates to: SQNKTYGRPHSPSLACGWRASLS*RTSSSE
Trigger: TTCACTTGAGGAAGTTCGCAAAGAAAGTGAAGCTCT...CCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CAA 90 bp TCTCAGAATAAAACTTATGGTCGGCCCCACAGCCCATCTCTTGCCTGCGGATGGGAACTCTCTAACACATaGGAAACCCAAAAGGTGAGT +
Preference number: 5 (lower is better)
Translates to: SQNKTYGRPHSPSLACGWELSNT*ETQKVS
Trigger: ACTCACCTTTTGGGTTTCCAATGTGTTAGAGAGTTC...CCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS TCA 90 bp GGCTCCAGTAGCTTCTCCACGGTGAATGTTTGGACCTGCAGATCCTaGGGATCGATATTCAATGTGATTGGTGTTTCAGCTGACATGCTT +
Preference number: 5 (lower is better)
Translates to: GSSSFSTVNVWTCRS*GSIFNVIGVSADML
Trigger: AAGCATGTCAGCTGAAACACCAATCACATTGAATATCGATCCTCAGGATCTGCAGGTCCAAACATTCACCGTGGAGAAGCTACTGGAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684154.1
CDS TCA 90 bp AATCATGGCAGAAGGCACCTCTTCACAGGGAGACAGGAGAGAGAATaGGTGCCCGAAAGGGAAATGCCAGATGCTTATAAAACCATCAGA +
Preference number: 5 (lower is better)
Translates to: NHGRRHLFTGRQERE*VPEREMPDAYKTIR
Trigger: TCTGATGGTTTTATAAGCATCTGGCATTTCCCTTTCGGGCACTCATTCTCTCTCCTGTCTCCCTGTGAAGAGGTGCCTTCTGCCATGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684489.1
CDS-3UTR CAA 90 bp TCTCAGAATAAAACTTATGGTCGGCCCCACAGCCCATCTCTTGCCTGCGGATGGTTCTGGAGGTCAGATTaGTTGGCAACATTTTTGAGA +
Preference number: 5 (lower is better)
Translates to: SQNKTYGRPHSPSLACGWFWRSD*LATFLR
Trigger: TCTCAAAAATGTTGCCAACAAATCTGACCTCCAGAA...CCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTCTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS CCA 90 bp TGTAAGGAAGTTAACATTTCTCATTACACCTTCCGTGTAAGCCCCTaGCTCGTAACTGTCCATTTCACCCGTGACGATGTGAGCAACTCT +
Preference number: 5 (lower is better)
Translates to: CKEVNISHYTFRVSP*LVTVHFTRDDVSNS
Trigger: AGAGTTGCTCACATCGTCACGGGTGAAATGGACAGTTACGAGCCAGGGGCTTACACGGAAGGTGTAATGAGAAATGTTAACTTCCTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000433211.7
ENST00000682758.1
ENST00000683624.1
ENST00000683963.1
ENST00000684154.1
ENST00000684489.1
CDS CCA 90 bp GAACAGCATAGGGGAAACCACCCCCATGATTCAATTACCTCCCACTaGGTCCCTCCCTCAACAAATGAGGATTATGAGAATTACAGTTCA +
Preference number: 5 (lower is better)
Translates to: EQHRGNHPHDSITSH*VPPSTNEDYENYSS
Trigger: TGAACTGTAATTCTCATAATCCTCATTTGTTGAGGGAGGGACCCAGTGGGAGGTAATTGAATCATGGGGGTGGTTTCCCCTATGCTGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684489.1
CDS-3UTR CAA 90 bp TTATTTAGGTACAATTCAACCATAAATGGAGAATGGGAGCCTCATTCTCCTGGAGCCTGGCGAATGGCGTaGCATTCTGCGATAATCCGC +
Preference number: 5 (lower is better)
Translates to: LFRYNSTINGEWEPHSPGAWRMA*HSAIIR
Trigger: GCGGATTATCGCAGAATGCAACGCCATTCGCCAGGC...TCCAGGAGAATGAGGCTCCCATTCTCCATTTATGGTTGAATTGTACCTAAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494580.1
CDS-3UTR CAA 90 bp CTACAGGAATTCACTCAGGTGGACAGATGCCTTTTTCAGCTCTATGCATCTTGTTGGAACAAGCAAGATTaGCCACCTCTACAAGCCTGC +
Preference number: 5 (lower is better)
Translates to: LQEFTQVDRCLFQLYASCWNKQD*PPLQAC
Trigger: GCAGGCTTGTAGAGGTGGCAAATCTTGCTTGTTCCA...ACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CAA 90 bp TCTCAGAATAAAACTTATGGTCGGCCCCACAGCCCATCTCTTGCCTGCGGATGGTTCCATCTTCATTTGTaGACATGGAACAAGCAAGAT +
Preference number: 5 (lower is better)
Translates to: SQNKTYGRPHSPSLACGWFHLHL*TWNKQD
Trigger: ATCTTGCTTGTTCCATGTCAACAAATGAAGATGGAA...CCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CAA 90 bp CTACAGGAATTCACTCAGGTGGACAGATGCCTTTTTCAGCTCTATGCATCTTGTGGTGTTTTTGACCGCTaGACTTTTGGGTCTTGCAGC +
Preference number: 5 (lower is better)
Translates to: LQEFTQVDRCLFQLYASCGVFDR*TFGSCS
Trigger: GCTGCAAGACCCAAAAGTCAAGCGGTCAAAAACACC...ACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CAA 90 bp CCTCTCAGACCCTTCCCTACCTCTGGCACCTTCTTATTTGTTGTGCCTTTAGACACATTCAATGAGCTTTaGCTTAAGGCTTCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: PLRPFPTSGTFLFVVPLDTFNEL*LKASKA
Trigger: TGCCTTGGAAGCCTTAAGCAAAAGCTCATTGAATGT...GTCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGTCTGAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CAA 90 bp TCTCAGAATAAAACTTATGGTCGGCCCCACAGCCCATCTCTTGCCTGCGGATGGAAGTCACTTACTCTGTaGTTACACATTAGGCTTTTC +
Preference number: 5 (lower is better)
Translates to: SQNKTYGRPHSPSLACGWKSLTL*LHIRLF
Trigger: GAAAAGCCTAATGTGTAACAACAGAGTAAGTGACTT...CCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CAA 90 bp TCTCAGAATAAAACTTATGGTCGGCCCCACAGCCCATCTCTTGCCTGCGGATGGGTAATTTGGCAAAGGTaGTCCTCTTATTTCAGATCA +
Preference number: 5 (lower is better)
Translates to: SQNKTYGRPHSPSLACGWVIWQR*SSYFRS
Trigger: TGATCTGAAATAAGAGGACAACCTTTGCCAAATTAC...CCATCCGCAGGCAAGAGATGGGCTGTGGGGCCGACCATAAGTTTTATTCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS TCA 90 bp CAAGGCGTTTCTCTAGTGATGGTCGTATTTCCTCCTCAGTTACTGTaGGTGGATTCAGGACAATTAAATTCTCCAGCTCATCAAGGGCAC +
Preference number: 5 (lower is better)
Translates to: QGVSLVMVVFPPQLL*VDSGQLNSPAHQGH
Trigger: GTGCCCTTGATGAGCTGGAGAATTTAATTGTCCTGAATCCACTCACAGTAACTGAGGAGGAAATACGACCATCACTAGAGAAACGCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000433211.7
ENST00000545309.3
ENST00000682166.1
ENST00000682758.1
ENST00000682945.1
ENST00000683272.1
ENST00000683624.1
ENST00000683630.1
ENST00000683771.1
ENST00000683963.1
ENST00000684154.1
CDS-3UTR CAA 90 bp CCTCTCAGACCCTTCCCTACCTCTGGCACCTTCTTATTTGTTGTGCCTTTAGACCATAGATCACATCAGTaGTATGCTTTAGTGGTCCTT +
Preference number: 5 (lower is better)
Translates to: PLRPFPTSGTFLFVVPLDHRSHQ*YALVVL
Trigger: AAGGACCACTAAAGCATACAACTGATGTGATCTATG...GTCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGTCTGAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CAA 90 bp TTCTGGGCAGTGCATTCTGTTCAGAATAGTTATTGTAGGCCAGTCTATGGTGCATCTAAGGTTACATCGTaGCTGAGACGCCTCTCATCA +
Preference number: 5 (lower is better)
Translates to: FWAVHSVQNSYCRPVYGASKVTS*LRRLSS
Trigger: TGATGAGAGGCGTCTCAGCAACGATGTAACCTTAGA...TGCACCATAGACTGGCCTACAATAACTATTCTGAACAGAATGCACTGCCCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS TCA 90 bp GTATATGATTCTCCCATGTACGCTTGTACATTTCCATGGTGTTTTTaGCCGCTTGACTTTTGGGTCTTGCAGCCAAAGCAAGTGCAGCAT +
Preference number: 5 (lower is better)
Translates to: VYDSPMYACTFPWCF*PLDFWVLQPKQVQH
Trigger: ATGCTGCACTTGCTTTGGCTGCAAGACCCAAAAGTCAAGCGGTCAAAAACACCATGGAAATGTACAAGCGTACATGGGAGAATCATATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000433211.7
ENST00000682758.1
ENST00000682945.1
ENST00000683272.1
ENST00000683963.1
ENST00000684154.1
ENST00000684489.1
CDS TCA 90 bp GCATTGTGCCTGAGGCTTGGGATAAAACTAAACAAAACAGACATGTaGTCTGCCTGCACAGAGCTTAAAGTGTATGAGGGATGCTGTCTA +
Preference number: 5 (lower is better)
Translates to: ALCLRLGIKLNKTDM*SACTELKVYEGCCL
Trigger: TAGACAGCATCCCTCATACACTTTAAGCTCTGTGCAGGCAGATCACATGTCTGTTTTGTTTAGTTTTATCCCAAGCCTCAGGCACAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683630.1
CDS GCA 90 bp TCACAAACTGTGTCCTTGCTTGCTTTGAGGGAAGCAACATCAGAATaGTCCAAACAAGCTGAACAAATTGAATGCAAGAGGGGAGAGTTC +
Preference number: 5 (lower is better)
Translates to: SQTVSLLALREATSE*SKQAEQIECKRGEF
Trigger: GAACTCTCCCCTCTTGCATTCAATTTGTTCAGCTTGTTTGGAGCATTCTGATGTTGCTTCCCTCAAAGCAAGCAAGGACACAGTTTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000433211.7
ENST00000545309.3
ENST00000682166.1
ENST00000682758.1
ENST00000682945.1
ENST00000683272.1
ENST00000683624.1
ENST00000683630.1
ENST00000683771.1
ENST00000683963.1
ENST00000684154.1
CDS GCA 90 bp TCTTCACAGGGAGACAGGAGAGAGAATGAGTGCCCGAAAGGGAAATaGCAGATGCTTATAAAACCATCAGATTTTGTGAGAACTCACTGT +
Preference number: 5 (lower is better)
Translates to: SSQGDRRENECPKGK*QMLIKPSDFVRTHC
Trigger: ACAGTGAGTTCTCACAAAATCTGATGGTTTTATAAGCATCTGGCATTTCCCTTTCGGGCACTCATTCTCTCTCCTGTCTCCCTGTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684489.1
CDS-3UTR CAA 90 bp CCTCTCAGACCCTTCCCTACCTCTGGCACCTTCTTATTTGTTGTGCCTTTAGACGTGGTTTCAGTAGATTaGTCTTCCTCTAAATTCACT +
Preference number: 5 (lower is better)
Translates to: PLRPFPTSGTFLFVVPLDVVSVD*SSSKFT
Trigger: AGTGAATTTAGAGGAAGACAAATCTACTGAAACCAC...GTCTAAAGGCACAACAAATAAGAAGGTGCCAGAGGTAGGGAAGGGTCTGAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CAA 90 bp CTACAGGAATTCACTCAGGTGGACAGATGCCTTTTTCAGCTCTATGCATCTTGTGTCTGCGAAGGTCTCTaGTCTTCTTACACATGTTGT +
Preference number: 5 (lower is better)
Translates to: LQEFTQVDRCLFQLYASCVCEGL*SSYTCC
Trigger: ACAACATGTGTAAGAAGACAAGAGACCTTCGCAGAC...ACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CAA 90 bp CTACAGGAATTCACTCAGGTGGACAGATGCCTTTTTCAGCTCTATGCATCTTGTCAGGTTGAGTTCCATTaGGAGACAGCTCTCTCAATT +
Preference number: 5 (lower is better)
Translates to: LQEFTQVDRCLFQLYASCQVEFH*ETALSI
Trigger: AATTGAGAGAGCTGTCTCCAAATGGAACTCAACCTG...ACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS CCA 90 bp ATTAAGGTTAAGGGCCTTCAGATGGGAGGATTATCCTGGATAATCTaGGTGGCTCCCACTAATCACATGAGTCCTAAAAAGAAGAGAATC +
Preference number: 5 (lower is better)
Translates to: IKVKGLQMGGLSWII*VAPTNHMSPKKKRI
Trigger: GATTCTCTTCTTTTTAGGACTCATGTGATTAGTGGGAGCCACCCAGATTATCCAGGATAATCCTCCCATCTGAAGGCCCTTAACCTTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683630.1
CDS-3UTR CAA 90 bp TTCTGGGCAGTGCATTCTGTTCAGAATAGTTATTGTAGGCCAGTCTATGGTGCAAACAAGCTGAACAAATaGAATGCAAGAGGGGAGAGT +
Preference number: 5 (lower is better)
Translates to: FWAVHSVQNSYCRPVYGANKLNK*NARGES
Trigger: ACTCTCCCCTCTTGCATTCAATTTGTTCAGCTTGTT...TGCACCATAGACTGGCCTACAATAACTATTCTGAACAGAATGCACTGCCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CAA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATGAGGTTCTGGTGGGGTaGTCATATTCTGGATCCCTT +
Preference number: 5 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYEVLVG*SYSGSL
Trigger: AAGGGATCCAGAATATGACAACCCCACCAGAACCTC...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CAA 90 bp GTACAATTCAACCATAAATGGAGAATGGGAGCCTCATTCTCCTGGACTTTAGTGGTCTGCGAAGGTCTCTaGTCTTCTTACACATGTTGT +
Preference number: 5 (lower is better)
Translates to: VQFNHKWRMGASFSWTLVVCEGL*SSYTCC
Trigger: ACAACATGTGTAAGAAGACAAGAGACCTTCGCAGAC...CACTAAAGTCCAGGAGAATGAGGCTCCCATTCTCCATTTATGGTTGAATTGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494580.1
CDS-3UTR CAA 90 bp CTACAGGAATTCACTCAGGTGGACAGATGCCTTTTTCAGCTCTATGCATCTTGTTTCTCCCATGTACGCTaGTACATTTCCATGGTGTTT +
Preference number: 5 (lower is better)
Translates to: LQEFTQVDRCLFQLYASCFSHVR*YISMVF
Trigger: AAACACCATGGAAATGTACAAGCGTACATGGGAGAA...ACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CAA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATACAGGGAGGAGTTTATaGCCTTCACCTCCTAGGAAG +
Preference number: 5 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYTGRSL*PSPPRK
Trigger: CTTCCTAGGAGGTGAAGGCAATAAACTCCTCCCTGT...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CAA 90 bp CTACAGGAATTCACTCAGGTGGACAGATGCCTTTTTCAGCTCTATGCATCTTGTGTTAAAGAGGAGAACTaGTTCACATCTCACTTTGGG +
Preference number: 5 (lower is better)
Translates to: LQEFTQVDRCLFQLYASCVKEEN*FTSHFG
Trigger: CCCAAAGTGAGATGTGAACAAGTTCTCCTCTTTAAC...ACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CAA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTGGGATTCTGGTCAGGTaGAGTTCCATTTGGAGACAG +
Preference number: 5 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCGILVR*SSIWRQ
Trigger: CTGTCTCCAAATGGAACTCAACCTGACCAGAATCCC...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CAA 90 bp CTACAGGAATTCACTCAGGTGGACAGATGCCTTTTTCAGCTCTATGCATCTTGTGCTATGATACACTTGTaGACATCTTCCAAGATATGG +
Preference number: 5 (lower is better)
Translates to: LQEFTQVDRCLFQLYASCAMIHL*TSSKIW
Trigger: CCATATCTTGGAAGATGTCAACAAGTGTATCATAGC...ACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS GCA 90 bp AAAACACTCACAAATCTAATTTGGGTGACTAACACCCTAAAGATATaGAGTTTGCTCCTGACCAGGATTGGAGTACTCACTTTCTTTGCG +
Preference number: 5 (lower is better)
Translates to: KTLTNLIWVTNTLKI*SLLLTRIGVLTFFA
Trigger: CGCAAAGAAAGTGAGTACTCCAATCCTGGTCAGGAGCAAACTGCATATCTTTAGGGTGTTAGTCACCCAAATTAGATTTGTGAGTGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682505.1
CDS-3UTR CAA 90 bp CTACAGGAATTCACTCAGGTGGACAGATGCCTTTTTCAGCTCTATGCATCTTGTAAGGCTATGATACACTaGTTGACATCTTCCAAGATA +
Preference number: 5 (lower is better)
Translates to: LQEFTQVDRCLFQLYASCKAMIH*LTSSKI
Trigger: TATCTTGGAAGATGTCAACAAGTGTATCATAGCCTT...ACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CAA 90 bp CTACAGGAATTCACTCAGGTGGACAGATGCCTTTTTCAGCTCTATGCATCTTGTTCAGCTCTATGCATCTaGTTTTTATGTCACTATCGA +
Preference number: 5 (lower is better)
Translates to: LQEFTQVDRCLFQLYASCSALCI*FLCHYR
Trigger: TCGATAGTGACATAAAAACAAGATGCATAGAGCTGA...ACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CAA 90 bp CTACAGGAATTCACTCAGGTGGACAGATGCCTTTTTCAGCTCTATGCATCTTGTCAATATACACATCCATaGCTCAAACTAGGAATGTGT +
Preference number: 5 (lower is better)
Translates to: LQEFTQVDRCLFQLYASCQYTHP*LKLGMC
Trigger: ACACATTCCTAGTTTGAGCAATGGATGTGTATATTG...ACAAGATGCATAGAGCTGAAAAAGGCATCTGTCCACCTGAGTGAATTCCTGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS TCA 90 bp CATCAGTCATCCCCTCTATTCCAAAATGTTTGTGTTCTAACATCCTaGGACACCTTGCATAATATAATCACTGTGACTCCAAGAGGTCAA +
Preference number: 5 (lower is better)
Translates to: HQSSPLFQNVCVLTS*DTLHNIITVTPRGQ
Trigger: TTGACCTCTTGGAGTCACAGTGATTATATTATGCAAGGTGTCTCAGGATGTTAGAACACAAACATTTTGGAATAGAGGGGATGACTGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682166.1
CDS-3UTR CAA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTTGGAGGTCAGATTTGTaGGCAACATTTTTGAGAGAC +
Preference number: 5 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCWRSDL*ATFLRD
Trigger: GTCTCTCAAAAATGTTGCCAACAAATCTGACCTCCA...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CAA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTCAAGGACATCCATCCTaGATCCTGATTCTGATATCA +
Preference number: 5 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCQGHPS*ILILIS
Trigger: TGATATCAGAATCAGGATCAAGGATGGATGTCCTTG...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CAA 90 bp AACTTGTTAGTCACGGATATGGAGGAGAAATTATTATGCTACCATTTAGGTCTAGTGTCCTTGCTTGCTTaGAGGGAAGCAACATCAGAA +
Preference number: 5 (lower is better)
Translates to: NLLVTDMEEKLLCYHLGLVSLLA*REATSE
Trigger: TTCTGATGTTGCTTCCCTCAAAGCAAGCAAGGACAC...TAGACCTAAATGGTAGCATAATAATTTCTCCTCCATATCCGTGACTAACAAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CAA 90 bp AACTTGTTAGTCACGGATATGGAGGAGAAATTATTATGCTACCATTTAGGTCTATCACAAACTGTGTCCTaGCTTGCTTTGAGGGAAGCA +
Preference number: 5 (lower is better)
Translates to: NLLVTDMEEKLLCYHLGLSQTVS*LALREA
Trigger: TGCTTCCCTCAAAGCAAGCAAGGACACAGTTTGTGA...TAGACCTAAATGGTAGCATAATAATTTCTCCTCCATATCCGTGACTAACAAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CAA 90 bp GTACAATTCAACCATAAATGGAGAATGGGAGCCTCATTCTCCTGGACTTTAGTGGTCTTCTTACACATGTaGTCTAAAGCAATATTCAGG +
Preference number: 5 (lower is better)
Translates to: VQFNHKWRMGASFSWTLVVFLHM*SKAIFR
Trigger: CCTGAATATTGCTTTAGACAACATGTGTAAGAAGAC...CACTAAAGTCCAGGAGAATGAGGCTCCCATTCTCCATTTATGGTTGAATTGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494580.1
CDS-3UTR CAA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTAAAGCCAGTGAGACTTaGAGCAAGATTCTTATCCCA +
Preference number: 5 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCKASET*SKILIP
Trigger: TGGGATAAGAATCTTGCTCAAAGTCTCACTGGCTTT...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CAA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATAAGAGAATTTTCTCCTaGAGGGCTTTCCTTTCCTAC +
Preference number: 5 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYKRIFS*RAFLSY
Trigger: GTAGGAAAGGAAAGCCCTCAAGGAGAAAATTCTCTT...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CAA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTTCTGTTTTCAGGAACTaGTTAGTCACGGATATGGAG +
Preference number: 5 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCSVFRN*LVTDME
Trigger: CTCCATATCCGTGACTAACAAGTTCCTGAAAACAGA...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS TCA 90 bp GGGTTGTCATATTCTGGATCCCTTGTGAAGCATTTGAAATTACATTaGGAGCATTCTGAATTTCTTCACAAACTGTGTCCTTGCTTGCTT +
Preference number: 5 (lower is better)
Translates to: GLSYSGSLVKHLKLH*EHSEFLHKLCPCLL
Trigger: AAGCAAGCAAGGACACAGTTTGTGAAGAAATTCAGAATGCTCTCAATGTAATTTCAAATGCTTCACAAGGGATCCAGAATATGACAACCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000433211.7
ENST00000545309.3
ENST00000682166.1
ENST00000682758.1
ENST00000682945.1
ENST00000683272.1
ENST00000683624.1
ENST00000683630.1
ENST00000683771.1
ENST00000683963.1
ENST00000684154.1
CDS CCA 90 bp TCAAGCTCCAGAAAAACTCTGGGCAGCACATGTTTAGCAATTAAGTaGACACAGACAATAAAGACGTTGCCAAATTGTAAAACAAGACTT +
Preference number: 5 (lower is better)
Translates to: SSSRKTLGSTCLAIK*TQTIKTLPNCKTRL
Trigger: AAGTCTTGTTTTACAATTTGGCAACGTCTTTATTGTCTGTGTCCACTTAATTGCTAAACATGTGCTGCCCAGAGTTTTTCTGGAGCTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682166.1
CDS-3UTR CAA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATAGAACAATGATGTCGTaGCTTGTATCATCCCATATC +
Preference number: 5 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYRTMMS*LVSSHI
Trigger: GATATGGGATGATACAAGCAACGACATCATTGTTCT...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CAA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTTGGTTAGGCAGGATTTaGTCATATAGGCACTATATG +
Preference number: 5 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCWLGRI*SYRHYM
Trigger: CATATAGTGCCTATATGACAAAATCCTGCCTAACCA...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CAA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATGCAATCTTCTCTCCCTaGTCTAATAAATTCCAAGTT +
Preference number: 5 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYAIFSP*SNKFQV
Trigger: AACTTGGAATTTATTAGACAAGGGAGAGAAGATTGC...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CAA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATTTGTTGGCAACATTTTaGAGAGACTCAAATGTCCTT +
Preference number: 5 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYLLATF*RDSNVL
Trigger: AAGGACATTTGAGTCTCTCAAAAATGTTGCCAACAA...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CAA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTTTTCATCTCTCTGATTaGGAGATTTTAAGTCCTGCT +
Preference number: 5 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCFHLSD*EILSPA
Trigger: AGCAGGACTTAAAATCTCCAAATCAGAGAGATGAAA...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CAA 90 bp TTAAACACAAAAGACATGCAGGGTCTCAAACAAGGAGTATTTGGGCTTCTATGTCAAGGCAACATTCACTaGTGTTACAAATTCAGGAAT +
Preference number: 5 (lower is better)
Translates to: LNTKDMQGLKQGVFGLLCQGNIH*CYKFRN
Trigger: ATTCCTGAATTTGTAACACAAGTGAATGTTGCCTTG...ACATAGAAGCCCAAATACTCCTTGTTTGAGACCCTGCATGTCTTTTGTGTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CAA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATACTCTCAAACTGCTATaGTTATTAGTCCTGGCTTAT +
Preference number: 5 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYTLKLL*LLVLAY
Trigger: ATAAGCCAGGACTAATAACAATAGCAGTTTGAGAGT...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CAA 90 bp CCTTTAGACTACTCCGTATCGTCTCCATTTTTCTCCAACTTACCAAACTCATATCAGGCTTTTGAACTATaGATACAACTATTCAAAGGG +
Preference number: 5 (lower is better)
Translates to: PLDYSVSSPFFSNLPNSYQAFEL*IQLFKG
Trigger: CCCTTTGAATAGTTGTATCAATAGTTCAAAAGCCTG...ATATGAGTTTGGTAAGTTGGAGAAAAATGGAGACGATACGGAGTAGTCTAAAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS-3UTR CAA 90 bp AACTTGTTAGTCACGGATATGGAGGAGAAATTATTATGCTACCATTTAGGTCTAGATCTCAGCTTTAACTaGACTGCAGATTTTCAGTTG +
Preference number: 5 (lower is better)
Translates to: NLLVTDMEEKLLCYHLGLDLSFN*TADFQL
Trigger: CAACTGAAAATCTGCAGTCAAGTTAAAGCTGAGATC...TAGACCTAAATGGTAGCATAATAATTTCTCCTCCATATCCGTGACTAACAAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS GCA 90 bp ATAAGACCTTTTATAACAGGCAGTCCATTGTATAAATGTAGTAGATaGTTGAAACTCATTTCAGTTAATGTCAGAGAGGCTGTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: IRPFITGSPLYKCSR*LKLISVNVREAVSP
Trigger: TGGAGAAACAGCCTCTCTGACATTAACTGAAATGAGTTTCAAGCATCTACTACATTTATACAATGGACTGCCTGTTATAAAAGGTCTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683630.1
CDS-3UTR CAA 90 bp AACTTGTTAGTCACGGATATGGAGGAGAAATTATTATGCTACCATTTAGGTCTAGTCTTCTTACACATGTaGTCTAAAGCAATATTCAGG +
Preference number: 5 (lower is better)
Translates to: NLLVTDMEEKLLCYHLGLVFLHM*SKAIFR
Trigger: CCTGAATATTGCTTTAGACAACATGTGTAAGAAGAC...TAGACCTAAATGGTAGCATAATAATTTCTCCTCCATATCCGTGACTAACAAGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433211.7
CDS TCA 72 bp CCCCACGGAGTCTCGCTGATTGCTAGCACGGCAGTCTaGGATCAAACTGCAAGGCAGCAGCGAGGCTGGGGG +
Preference number: 6 (lower is better)
Translates to: PHGVSLIASTAV*DQTARQQRGWG
Trigger: CCCCCAGCCTCGCTGCTGCCTTGCAGTTTGATCTCAGACTGCCGTGCTAGCAATCAGCGAGACTCCGTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683771.1
CDS TCA 72 bp TCTCCTGCCTTCTGGGCTCCAACGCAGCTCTGTGGCTaGACTGGGTGCTCATCACGGGAACTGCTGGGGTAT +
Preference number: 6 (lower is better)
Translates to: SPAFWAPTQLCG*TGCSSRELLGY
Trigger: ATACCCCAGCAGTTCCCGTGATGAGCACCCAGTTCAGCCACAGAGCTGCGTTGGAGCCCAGAAGGCAGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682166.1
CDS TCA 72 bp AGTCCGAGCAGCTTTCAGAATGACAGTCTGCAGAAGTaGGCTGAGCGTGTGCGCGGTACGGGGCTCTCCTGC +
Preference number: 6 (lower is better)
Translates to: SPSSFQNDSLQK*AERVRGTGLSC
Trigger: GCAGGAGAGCCCCGTACCGCGCACACGCTCAGCTCACTTCTGCAGACTGTCATTCTGAAAGCTGCTCGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682166.1
CDS GCA 72 bp ACTGTCCATTTCACCCGTGACGATGTGAGCAACTCTTaGTGCCCGGCCTCTGATAGCACCCGCAGCACGGTC +
Preference number: 6 (lower is better)
Translates to: TVHFTRDDVSNS*CPASDSTRSTV
Trigger: GACCGTGCTGCGGGTGCTATCAGAGGCCGGGCAGCAAGAGTTGCTCACATCGTCACGGGTGAAATGGACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000433211.7
ENST00000682758.1
ENST00000683624.1
ENST00000683963.1
ENST00000684154.1
ENST00000684489.1
CDS GCA 72 bp TTCAGAATGACAGTCTGCAGAAGTGAGCTGAGCGTGTaGGCGGTACGGGGCTCTCCTGCCTTCTGGGCTCCA +
Preference number: 6 (lower is better)
Translates to: FRMTVCRSELSV*AVRGSPAFWAP
Trigger: TGGAGCCCAGAAGGCAGGAGAGCCCCGTACCGCGCACACGCTCAGCTCACTTCTGCAGACTGTCATTCTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682166.1
CDS CCA 72 bp TCTGTGGCTGAACTGGGTGCTCATCACGGGAACTGCTaGGGTATGGAATACAGATGTGGCAGCTCAGGTAGC +
Preference number: 6 (lower is better)
Translates to: SVAELGAHHGNC*GMEYRCGSSGS
Trigger: GCTACCTGAGCTGCCACATCTGTATTCCATACCCCAGCAGTTCCCGTGATGAGCACCCAGTTCAGCCACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682166.1
CDS CCA 72 bp CACATGGCTGGGCAGGCCTCAGGAAACTTACAATCATaGCAGAAGGCACCTCTTCACAGGGAGACAGGAGAG +
Preference number: 6 (lower is better)
Translates to: HMAGQASGNLQS*QKAPLHRETGE
Trigger: CTCTCCTGTCTCCCTGTGAAGAGGTGCCTTCTGCCATGATTGTAAGTTTCCTGAGGCCTGCCCAGCCATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684489.1
CDS TCA 72 bp CTGGGTGCCGGGGCCCAGCAGGACTCTGGATTCGGATaGTCTTGGTTGAGGCAATGTAAGACATTTTCACTG +
Preference number: 6 (lower is better)
Translates to: LGAGAQQDSGFG*SWLRQCKTFSL
Trigger: CAGTGAAAATGTCTTACATTGCCTCAACCAAGATCATCCGAATCCAGAGTCCTGCTGGGCCCCGGCACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000373735.2
ENST00000433211.7
ENST00000682758.1
ENST00000682945.1
ENST00000683963.1
ENST00000684154.1
CDS TCA 72 bp GACCGAGCAACTAAAAAGAAGAGCCTGGAGTGGGACTaGGCCTTGGAGCTGTCTAATGAGCCACTCTGCCTC +
Preference number: 6 (lower is better)
Translates to: DRATKKKSLEWD*ALELSNEPLCL
Trigger: GAGGCAGAGTGGCTCATTAGACAGCTCCAAGGCTCAGTCCCACTCCAGGCTCTTCTTTTTAGTTGCTCGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682505.1
CDS CCA 72 bp CAACTAAAAAGAAGAGCCTGGAGTGGGACTGAGCCTTaGAGCTGTCTAATGAGCCACTCTGCCTCCCACAGC +
Preference number: 6 (lower is better)
Translates to: QLKRRAWSGTEP*SCLMSHSASHS
Trigger: GCTGTGGGAGGCAGAGTGGCTCATTAGACAGCTCCAAGGCTCAGTCCCACTCCAGGCTCTTCTTTTTAGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682505.1
CDS CCA 72 bp CTGAACTGGGTGCTCATCACGGGAACTGCTGGGGTATaGAATACAGATGTGGCAGCTCAGGTAGCCCCAAAT +
Preference number: 6 (lower is better)
Translates to: LNWVLITGTAGV*NTDVAAQVAPN
Trigger: ATTTGGGGCTACCTGAGCTGCCACATCTGTATTCCATACCCCAGCAGTTCCCGTGATGAGCACCCAGTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682166.1
CDS CAA 90 bp TCAGGACAATTAAATTCTCCAGCTCATCAAGGGCACTTCCCAGGGTaGCTGCCTGAGGTTCTGGTGGGGTTGTCATATTCTGGATCCCTT +
Preference number: 6 (lower is better)
Translates to: SGQLNSPAHQGHFPG*LPEVLVGLSYSGSL
Trigger: AAGGGATCCAGAATATGACAACCCCACCAGAACCTCAGGCAGCAACCCTGGGAAGTGCCCTTGATGAGCTGGAGAATTTAATTGTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000433211.7
ENST00000545309.3
ENST00000682166.1
ENST00000682758.1
ENST00000682945.1
ENST00000683272.1
ENST00000683624.1
ENST00000683630.1
ENST00000683771.1
ENST00000683963.1
ENST00000684154.1
CDS GCA 72 bp GGCACCTCTTCACAGGGAGACAGGAGAGAGAATGAGTaGCCGAAAGGGAAATGCCAGATGCTTATAAAACCA +
Preference number: 6 (lower is better)
Translates to: GTSSQGDRRENE*PKGKCQMLIKP
Trigger: TGGTTTTATAAGCATCTGGCATTTCCCTTTCGGGCACTCATTCTCTCTCCTGTCTCCCTGTGAAGAGGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684489.1
CDS CAA 72 bp CACTTCCCAGGGTTGCTGCCTGAGGTTCTGGTGGGGTaGTCATATTCTGGATCCCTTGTGAAGCATTTGAAA +
Preference number: 6 (lower is better)
Translates to: HFPGLLPEVLVG*SYSGSLVKHLK
Trigger: TTTCAAATGCTTCACAAGGGATCCAGAATATGACAACCCCACCAGAACCTCAGGCAGCAACCCTGGGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000433211.7
ENST00000545309.3
ENST00000682166.1
ENST00000682758.1
ENST00000682945.1
ENST00000683272.1
ENST00000683624.1
ENST00000683630.1
ENST00000683771.1
ENST00000683963.1
ENST00000684154.1
CDS TCA 72 bp GGGCCCAGCAGGACTCTGGATTCGGATGATCTTGGTTaGGGCAATGTAAGACATTTTCACTGTTTGCACTAC +
Preference number: 6 (lower is better)
Translates to: GPSRTLDSDDLG*GNVRHFHCLHY
Trigger: GTAGTGCAAACAGTGAAAATGTCTTACATTGCCTCAACCAAGATCATCCGAATCCAGAGTCCTGCTGGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000373735.2
ENST00000433211.7
ENST00000682758.1
ENST00000682945.1
ENST00000683963.1
ENST00000684154.1
CDS TCA 72 bp AGAAGGCACCTCTTCACAGGGAGACAGGAGAGAGAATaGGTGCCCGAAAGGGAAATGCCAGATGCTTATAAA +
Preference number: 6 (lower is better)
Translates to: RRHLFTGRQERE*VPEREMPDAYK
Trigger: TTTATAAGCATCTGGCATTTCCCTTTCGGGCACTCATTCTCTCTCCTGTCTCCCTGTGAAGAGGTGCCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684489.1
CDS GCA 72 bp TATCAGTTTTCCCTTCGGTCTGAATGCTGGTGTGACTaGGGACCTCGTGTTCCTCTTCAAGGTCAGAAACAT +
Preference number: 6 (lower is better)
Translates to: YQFSLRSECWCD*GPRVPLQGQKH
Trigger: ATGTTTCTGACCTTGAAGAGGAACACGAGGTCCGCAGTCACACCAGCATTCAGACCGAAGGGAAAACTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000433211.7
ENST00000682758.1
ENST00000682945.1
ENST00000683624.1
ENST00000683963.1
ENST00000684154.1
CDS CCA 72 bp GTTAACATTTCTCATTACACCTTCCGTGTAAGCCCCTaGCTCGTAACTGTCCATTTCACCCGTGACGATGTG +
Preference number: 6 (lower is better)
Translates to: VNISHYTFRVSP*LVTVHFTRDDV
Trigger: CACATCGTCACGGGTGAAATGGACAGTTACGAGCCAGGGGCTTACACGGAAGGTGTAATGAGAAATGTTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000433211.7
ENST00000682758.1
ENST00000683624.1
ENST00000683963.1
ENST00000684154.1
ENST00000684489.1
CDS CCA 72 bp AGGGGAAACCACCCCCATGATTCAATTACCTCCCACTaGGTCCCTCCCTCAACAAATGAGGATTATGAGAAT +
Preference number: 6 (lower is better)
Translates to: RGNHPHDSITSH*VPPSTNEDYEN
Trigger: ATTCTCATAATCCTCATTTGTTGAGGGAGGGACCCAGTGGGAGGTAATTGAATCATGGGGGTGGTTTCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684489.1
CDS CAA 72 bp AATGACTCGCTTCTGAAGCTCAGCTCTAGCACTCGCTaGCTGTATGACCTTGAGAAAGTTACCTCCCCAAGT +
Preference number: 6 (lower is better)
Translates to: NDSLLKLSSSTR*LYDLEKVTSPS
Trigger: ACTTGGGGAGGTAACTTTCTCAAGGTCATACAGCAAGCGAGTGCTAGAGCTGAGCTTCAGAAGCGAGTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682166.1
CDS TCA 72 bp GAGAATCTTTCCAAGGTGTGGTCAGAGAAAGAGATGTaGGGTTGGAAGCAGGGTCAGAGAAACATGACGTTG +
Preference number: 6 (lower is better)
Translates to: ENLSKVWSEKEM*GWKQGQRNMTL
Trigger: CAACGTCATGTTTCTCTGACCCTGCTTCCAACCTCACATCTCTTTCTCTGACCACACCTTGGAAAGATTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683630.1
CDS CCA 72 bp AAGGGCCTTCAGATGGGAGGATTATCCTGGATAATCTaGGTGGCTCCCACTAATCACATGAGTCCTAAAAAG +
Preference number: 6 (lower is better)
Translates to: KGLQMGGLSWII*VAPTNHMSPKK
Trigger: CTTTTTAGGACTCATGTGATTAGTGGGAGCCACCCAGATTATCCAGGATAATCCTCCCATCTGAAGGCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683630.1
CDS CAA 72 bp GGGCAATCTTCTCTCCCTTGTCTAATAAATTCCAAGTaGCTTCCTCCACAGAAGCTAGAAGGACACTGGCTC +
Preference number: 6 (lower is better)
Translates to: GQSSLPCLINSK*LPPQKLEGHWL
Trigger: GAGCCAGTGTCCTTCTAGCTTCTGTGGAGGAAGCAACTTGGAATTTATTAGACAAGGGAGAGAAGATTGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000330298.6
ENST00000433211.7
ENST00000682505.1
ENST00000682758.1
ENST00000682945.1
ENST00000683272.1
ENST00000683630.1
ENST00000683963.1
ENST00000684154.1
CDS CAA 90 bp AGAAGAGAATCTTTCCAAGGTGTGGTCAGAGAAAGAGATGTGAGGTaGGAAGCAGGGTCAGAGAAACATGACGTTGCTGGCTTAGAAGAT +
Preference number: 6 (lower is better)
Translates to: RRESFQGVVRERDVR*EAGSEKHDVAGLED
Trigger: ATCTTCTAAGCCAGCAACGTCATGTTTCTCTGACCCTGCTTCCAACCTCACATCTCTTTCTCTGACCACACCTTGGAAAGATTCTCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683630.1
CDS TCA 72 bp AGCTTCTCCACGGTGAATGTTTGGACCTGCAGATCCTaGGGATCGATATTCAATGTGATTGGTGTTTCAGCT +
Preference number: 6 (lower is better)
Translates to: SFSTVNVWTCRS*GSIFNVIGVSA
Trigger: AGCTGAAACACCAATCACATTGAATATCGATCCTCAGGATCTGCAGGTCCAAACATTCACCGTGGAGAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000330298.6
ENST00000433211.7
ENST00000545309.3
ENST00000682166.1
ENST00000682505.1
ENST00000682758.1
ENST00000682945.1
ENST00000683272.1
ENST00000683624.1
ENST00000683630.1
ENST00000683963.1
ENST00000684154.1
CDS TCA 72 bp TCTCCCATGTACGCTTGTACATTTCCATGGTGTTTTTaGCCGCTTGACTTTTGGGTCTTGCAGCCAAAGCAA +
Preference number: 6 (lower is better)
Translates to: SPMYACTFPWCF*PLDFWVLQPKQ
Trigger: TTGCTTTGGCTGCAAGACCCAAAAGTCAAGCGGTCAAAAACACCATGGAAATGTACAAGCGTACATGGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000433211.7
ENST00000682758.1
ENST00000682945.1
ENST00000683272.1
ENST00000683963.1
ENST00000684154.1
ENST00000684489.1
CDS GCA 72 bp ACATCAGAATGCTCCAAACAAGCTGAACAAATTGAATaGAAGAGGGGAGAGTTCTCCTTCAGTGAAGCTCGG +
Preference number: 6 (lower is better)
Translates to: TSECSKQAEQIE*KRGEFSFSEAR
Trigger: CCGAGCTTCACTGAAGGAGAACTCTCCCCTCTTGCATTCAATTTGTTCAGCTTGTTTGGAGCATTCTGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000433211.7
ENST00000545309.3
ENST00000682166.1
ENST00000682758.1
ENST00000682945.1
ENST00000683272.1
ENST00000683624.1
ENST00000683630.1
ENST00000683771.1
ENST00000683963.1
ENST00000684154.1
CDS GCA 72 bp CAACTAGTAAAAGGCCTTCTGTTACTTTTCTCAAATTaGCCATCGACAGAAGTTGGCGCTTCTGTGGCGCTA +
Preference number: 6 (lower is better)
Translates to: QLVKGLLLLFSN*PSTEVGASVAL
Trigger: TAGCGCCACAGAAGCGCCAACTTCTGTCGATGGGCAATTTGAGAAAAGTAACAGAAGGCCTTTTACTAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684154.1
CDS CCA 72 bp CACCCTAAAGATATGCAGTTTGCTCCTGACCAGGATTaGAGTACTCACTTTCTTTGCGAACTTCCTCAAGTG +
Preference number: 6 (lower is better)
Translates to: HPKDMQFAPDQD*STHFLCELPQV
Trigger: CACTTGAGGAAGTTCGCAAAGAAAGTGAGTACTCCAATCCTGGTCAGGAGCAAACTGCATATCTTTAGGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682505.1
CDS GCA 72 bp GTGTCCTTGCTTGCTTTGAGGGAAGCAACATCAGAATaGTCCAAACAAGCTGAACAAATTGAATGCAAGAGG +
Preference number: 6 (lower is better)
Translates to: VSLLALREATSE*SKQAEQIECKR
Trigger: CCTCTTGCATTCAATTTGTTCAGCTTGTTTGGAGCATTCTGATGTTGCTTCCCTCAAAGCAAGCAAGGACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000433211.7
ENST00000545309.3
ENST00000682166.1
ENST00000682758.1
ENST00000682945.1
ENST00000683272.1
ENST00000683624.1
ENST00000683630.1
ENST00000683771.1
ENST00000683963.1
ENST00000684154.1
CDS GCA 72 bp GGAGACAGGAGAGAGAATGAGTGCCCGAAAGGGAAATaGCAGATGCTTATAAAACCATCAGATTTTGTGAGA +
Preference number: 6 (lower is better)
Translates to: GDRRENECPKGK*QMLIKPSDFVR
Trigger: TCTCACAAAATCTGATGGTTTTATAAGCATCTGGCATTTCCCTTTCGGGCACTCATTCTCTCTCCTGTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684489.1
CDS CCA 72 bp ATAGCACCCGCAGCACGGTCTAAATTATCAGCATCCTaGTCTCTTAAGGCTATGATACACTTGTTGACATCT +
Preference number: 6 (lower is better)
Translates to: IAPAARSKLSAS*SLKAMIHLLTS
Trigger: AGATGTCAACAAGTGTATCATAGCCTTAAGAGACCAGGATGCTGATAATTTAGACCGTGCTGCGGGTGCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000433211.7
ENST00000682758.1
ENST00000683624.1
ENST00000683963.1
ENST00000684154.1
ENST00000684489.1
CDS CCA 72 bp GACATTTCTGCACATGCCCATAATGTTCTTCACCACTaGGGGCAGCTTTACATAAGACTGCATTCACTGAAA +
Preference number: 6 (lower is better)
Translates to: DISAHAHNVLHH*GQLYIRLHSLK
Trigger: TTTCAGTGAATGCAGTCTTATGTAAAGCTGCCCCCAGTGGTGAAGAACATTATGGGCATGTGCAGAAATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682166.1
CDS TCA 72 bp GTAATGTCATCTACGGCTTCAGTGAGGACATGTATATaGTTCTCCCATGTACGCTTGTACATTTCCATGGTG +
Preference number: 6 (lower is better)
Translates to: VMSSTASVRTCI*FSHVRLYISMV
Trigger: CACCATGGAAATGTACAAGCGTACATGGGAGAATCATATACATGTCCTCACTGAAGCCGTAGATGACATTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000433211.7
ENST00000682758.1
ENST00000682945.1
ENST00000683272.1
ENST00000683963.1
ENST00000684154.1
ENST00000684489.1
CDS CAA 72 bp AAGCAACATCAGAATGCTCCAAACAAGCTGAACAAATaGAATGCAAGAGGGGAGAGTTCTCCTTCAGTGAAG +
Preference number: 6 (lower is better)
Translates to: KQHQNAPNKLNK*NARGESSPSVK
Trigger: CTTCACTGAAGGAGAACTCTCCCCTCTTGCATTCAATTTGTTCAGCTTGTTTGGAGCATTCTGATGTTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000433211.7
ENST00000545309.3
ENST00000682166.1
ENST00000682758.1
ENST00000682945.1
ENST00000683272.1
ENST00000683624.1
ENST00000683630.1
ENST00000683771.1
ENST00000683963.1
ENST00000684154.1
CDS CAA 72 bp TCAGCATCCTGGTCTCTTAAGGCTATGATACACTTGTaGACATCTTCCAAGATATGGCTTTCTGTGGACACA +
Preference number: 6 (lower is better)
Translates to: SASWSLKAMIHL*TSSKIWLSVDT
Trigger: TGTGTCCACAGAAAGCCATATCTTGGAAGATGTCAACAAGTGTATCATAGCCTTAAGAGACCAGGATGCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683624.1
CDS CAA 90 bp CTCACAAATCTAATTTGGGTGACTAACACCCTAAAGATATGCAGTTaGCTCCTGACCAGGATTGGAGTACTCACTTTCTTTGCGAACTTC +
Preference number: 6 (lower is better)
Translates to: LTNLIWVTNTLKICS*LLTRIGVLTFFANF
Trigger: GAAGTTCGCAAAGAAAGTGAGTACTCCAATCCTGGTCAGGAGCAAACTGCATATCTTTAGGGTGTTAGTCACCCAAATTAGATTTGTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682505.1
CDS TCA 72 bp TCTCTAGTGATGGTCGTATTTCCTCCTCAGTTACTGTaGGTGGATTCAGGACAATTAAATTCTCCAGCTCAT +
Preference number: 6 (lower is better)
Translates to: SLVMVVFPPQLL*VDSGQLNSPAH
Trigger: ATGAGCTGGAGAATTTAATTGTCCTGAATCCACTCACAGTAACTGAGGAGGAAATACGACCATCACTAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000433211.7
ENST00000545309.3
ENST00000682166.1
ENST00000682758.1
ENST00000682945.1
ENST00000683272.1
ENST00000683624.1
ENST00000683630.1
ENST00000683771.1
ENST00000683963.1
ENST00000684154.1
CDS GCA 72 bp ACAAATCTAATTTGGGTGACTAACACCCTAAAGATATaGAGTTTGCTCCTGACCAGGATTGGAGTACTCACT +
Preference number: 6 (lower is better)
Translates to: TNLIWVTNTLKI*SLLLTRIGVLT
Trigger: AGTGAGTACTCCAATCCTGGTCAGGAGCAAACTGCATATCTTTAGGGTGTTAGTCACCCAAATTAGATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682505.1
CDS CCA 72 bp TGGAACAAGCAAGATTTGCCACCTCTACAAGCCTGCTaGTGTGTTCATGAAATATCGCAGCATATTCTTTTA +
Preference number: 6 (lower is better)
Translates to: WNKQDLPPLQAC*CVHEISQHILL
Trigger: TAAAAGAATATGCTGCGATATTTCATGAACACACCAGCAGGCTTGTAGAGGTGGCAAATCTTGCTTGTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000433211.7
ENST00000682758.1
ENST00000682945.1
ENST00000683272.1
ENST00000683624.1
ENST00000683963.1
ENST00000684154.1
ENST00000684489.1
CDS CCA 72 bp GAAAACAGGTTTAATTTATTCATAGTTCCACATGGCTaGGCAGGCCTCAGGAAACTTACAATCATGGCAGAA +
Preference number: 6 (lower is better)
Translates to: ENRFNLFIVPHG*AGLRKLTIMAE
Trigger: TTCTGCCATGATTGTAAGTTTCCTGAGGCCTGCCCAGCCATGTGGAACTATGAATAAATTAAACCTGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684489.1
CDS CAA 72 bp CTAATTTGGGTGACTAACACCCTAAAGATATGCAGTTaGCTCCTGACCAGGATTGGAGTACTCACTTTCTTT +
Preference number: 6 (lower is better)
Translates to: LIWVTNTLKICS*LLTRIGVLTFF
Trigger: AAAGAAAGTGAGTACTCCAATCCTGGTCAGGAGCAAACTGCATATCTTTAGGGTGTTAGTCACCCAAATTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682505.1
CDS CAA 72 bp TTATCAGCATCCTGGTCTCTTAAGGCTATGATACACTaGTTGACATCTTCCAAGATATGGCTTTCTGTGGAC +
Preference number: 6 (lower is better)
Translates to: LSASWSLKAMIH*LTSSKIWLSVD
Trigger: GTCCACAGAAAGCCATATCTTGGAAGATGTCAACAAGTGTATCATAGCCTTAAGAGACCAGGATGCTGATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683624.1
CDS CAA 90 bp CGGTCTAAATTATCAGCATCCTGGTCTCTTAAGGCTATGATACACTaGTTGACATCTTCCAAGATATGGCTTTCAGATACAGCAAGGAAG +
Preference number: 6 (lower is better)
Translates to: RSKLSASWSLKAMIH*LTSSKIWLSDTARK
Trigger: CTTCCTTGCTGTATCTGAAAGCCATATCTTGGAAGATGTCAACAAGTGTATCATAGCCTTAAGAGACCAGGATGCTGATAATTTAGACCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000433211.7
ENST00000682758.1
ENST00000683963.1
ENST00000684154.1
ENST00000684489.1
CDS CAA 90 bp CGGTCTAAATTATCAGCATCCTGGTCTCTTAAGGCTATGATACACTaGTTGACATCTTCCAAGATATGGCTTTCTGTGGACACAAGGTTT +
Preference number: 6 (lower is better)
Translates to: RSKLSASWSLKAMIH*LTSSKIWLSVDTRF
Trigger: AAACCTTGTGTCCACAGAAAGCCATATCTTGGAAGATGTCAACAAGTGTATCATAGCCTTAAGAGACCAGGATGCTGATAATTTAGACCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683624.1
CDS CAA 90 bp TCTAAATTATCAGCATCCTGGTCTCTTAAGGCTATGATACACTTGTaGACATCTTCCAAGATATGGCTTTCTGTGGACACAAGGTTTCCA +
Preference number: 6 (lower is better)
Translates to: SKLSASWSLKAMIHL*TSSKIWLSVDTRFP
Trigger: TGGAAACCTTGTGTCCACAGAAAGCCATATCTTGGAAGATGTCAACAAGTGTATCATAGCCTTAAGAGACCAGGATGCTGATAATTTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683624.1
CDS TCA 72 bp TTTCAGTTTAAAGCCTGCGTTGAGGTTAAGAAAAATTaGCGTTCGGTCTGTGAACTTAATGTCAAGCTCCAG +
Preference number: 6 (lower is better)
Translates to: FQFKACVEVKKN*RSVCELNVKLQ
Trigger: CTGGAGCTTGACATTAAGTTCACAGACCGAACGTCAATTTTTCTTAACCTCAACGCAGGCTTTAAACTGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682166.1
CDS CCA 72 bp GTTACAGTTCTAGCATGCTTACCTCTACAAGCCTGCTaGTGTGTTCATGAAATATCGCAGCATATTCTTTTA +
Preference number: 6 (lower is better)
Translates to: VTVLACLPLQAC*CVHEISQHILL
Trigger: TAAAAGAATATGCTGCGATATTTCATGAACACACCAGCAGGCTTGTAGAGGTAAGCATGCTAGAACTGTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494580.1
CDS CAA 72 bp AGCTGTCTGCGAAGGTCTCTTGTCTTCTTACACATGTaGTCTAAAGCAATATTCAGGGTATTACTCCTTTCT +
Preference number: 6 (lower is better)
Translates to: SCLRRSLVFLHM*SKAIFRVLLLS
Trigger: AGAAAGGAGTAATACCCTGAATATTGCTTTAGACAACATGTGTAAGAAGACAAGAGACCTTCGCAGACAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000433211.7
ENST00000494580.1
ENST00000682758.1
ENST00000682945.1
ENST00000683272.1
ENST00000683624.1
ENST00000683771.1
ENST00000683963.1
ENST00000684154.1
ENST00000684489.1
CDS CAA 90 bp TCTAAATTATCAGCATCCTGGTCTCTTAAGGCTATGATACACTTGTaGACATCTTCCAAGATATGGCTTTCAGATACAGCAAGGAAGTCA +
Preference number: 6 (lower is better)
Translates to: SKLSASWSLKAMIHL*TSSKIWLSDTARKS
Trigger: TGACTTCCTTGCTGTATCTGAAAGCCATATCTTGGAAGATGTCAACAAGTGTATCATAGCCTTAAGAGACCAGGATGCTGATAATTTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000433211.7
ENST00000682758.1
ENST00000683963.1
ENST00000684154.1
ENST00000684489.1
CDS TCA 72 bp TCCCCTCTATTCCAAAATGTTTGTGTTCTAACATCCTaGGACACCTTGCATAATATAATCACTGTGACTCCA +
Preference number: 6 (lower is better)
Translates to: SPLFQNVCVLTS*DTLHNIITVTP
Trigger: TGGAGTCACAGTGATTATATTATGCAAGGTGTCTCAGGATGTTAGAACACAAACATTTTGGAATAGAGGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682166.1
CDS CAA 72 bp TTATCAGCATCCTGGTCTCTTAAGGCTATGATACACTaGTTGACATCTTCCAAGATATGGCTTTCAGATACA +
Preference number: 6 (lower is better)
Translates to: LSASWSLKAMIH*LTSSKIWLSDT
Trigger: TGTATCTGAAAGCCATATCTTGGAAGATGTCAACAAGTGTATCATAGCCTTAAGAGACCAGGATGCTGATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000433211.7
ENST00000682758.1
ENST00000683963.1
ENST00000684154.1
ENST00000684489.1
CDS CAA 90 bp CAGACCAAAAGAAATTTAGGCAATTCTAATAGAACAAGCAAGAATTaGCTAATCACAGCTTCCTTGCCCCAATCCTTTAATCGGCTTCAT +
Preference number: 6 (lower is better)
Translates to: QTKRNLGNSNRTSKN*LITASLPQSFNRLH
Trigger: ATGAAGCCGATTAAAGGATTGGGGCAAGGAAGCTGTGATTAGCAAATTCTTGCTTGTTCTATTAGAATTGCCTAAATTTCTTTTGGTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682166.1
CDS CCA 72 bp AGAAAAACTCTGGGCAGCACATGTTTAGCAATTAAGTaGACACAGACAATAAAGACGTTGCCAAATTGTAAA +
Preference number: 6 (lower is better)
Translates to: RKTLGSTCLAIK*TQTIKTLPNCK
Trigger: TTTACAATTTGGCAACGTCTTTATTGTCTGTGTCCACTTAATTGCTAAACATGTGCTGCCCAGAGTTTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682166.1
CDS CAA 90 bp AGACCTTTTATAACAGGCAGTCCATTGTATAAATGTAGTAGATGCTaGAAACTCATTTCAGTTAATGTCAGAGAGGCTGTTTCTCCATTA +
Preference number: 6 (lower is better)
Translates to: RPFITGSPLYKCSRC*KLISVNVREAVSPL
Trigger: TAATGGAGAAACAGCCTCTCTGACATTAACTGAAATGAGTTTCAAGCATCTACTACATTTATACAATGGACTGCCTGTTATAAAAGGTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683630.1
CDS CAA 72 bp ATAGGCACTATATGTAGAATAGTGGTTTCAGTAGATTaGTCTTCCTCTAAATTCACTCATGACTTGCAATGG +
Preference number: 6 (lower is better)
Translates to: IGTICRIVVSVD*SSSKFTHDLQW
Trigger: CCATTGCAAGTCATGAGTGAATTTAGAGGAAGACAAATCTACTGAAACCACTATTCTACATATAGTGCCTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000373735.2
ENST00000433211.7
ENST00000682758.1
ENST00000682945.1
ENST00000683963.1
ENST00000684154.1
CDS CAA 72 bp AGAAATTTAGGCAATTCTAATAGAACAAGCAAGAATTaGCTAATCACAGCTTCCTTGCCCCAATCCTTTAAT +
Preference number: 6 (lower is better)
Translates to: RNLGNSNRTSKN*LITASLPQSFN
Trigger: ATTAAAGGATTGGGGCAAGGAAGCTGTGATTAGCAAATTCTTGCTTGTTCTATTAGAATTGCCTAAATTTCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682166.1