RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CTNNA2 (Homo sapiens)

Ensembl gene IDs: ENSG00000066032

Ensembl transcript IDs: ENST00000343114.7, ENST00000361291.8, ENST00000402739.9, ENST00000409266.5, ENST00000409550.2, ENST00000409971.6, ENST00000451966.5, ENST00000465616.1, ENST00000466387.5, ENST00000467488.1, ENST00000467892.1, ENST00000493024.5, ENST00000496251.5, ENST00000496558.5, ENST00000497804.1, ENST00000508970.1, ENST00000540488.5, ENST00000541047.5, ENST00000629316.2

Found 920 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTaGCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAG +
Preference number: 1 (lower is better)
Translates to: NSVPNFMRMLQRTAL*HLSTGMSCLLPRLQ
Trigger: CTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
3UTR TCA 90 bp ACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTATaGGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAA +
Preference number: 1 (lower is better)
Translates to: TPINIAPMRTLCPIL*ECCKGQLCATLVQE
Trigger: TTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
3UTR GCA 90 bp ATCTCATCTTACATGCAAACAGACACTGTTCCCTTAATTTCCCCATaGCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAAT +
Preference number: 1 (lower is better)
Translates to: ISSYMQTDTVPLISP*QRHTSWQVCIQKWN
Trigger: ATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAATTAAGGGAACAGTGTCTGTTTGCATGTAAGATGAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
3UTR TCA 90 bp TCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTTTGCACTaGAACAGAAGCAATACAAGTTTTATGTTCTACCATTACACTTCC +
Preference number: 1 (lower is better)
Translates to: SWATHLSVLASTFLH*NRSNTSFMFYHYTS
Trigger: GGAAGTGTAATGGTAGAACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
3UTR-3UTR GCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTCCCTTAATTTCCCCATaGCAGAGGCATACGAGCTGG +
Preference number: 2 (lower is better)
Translates to: HPSHSHKYCANANSVPNFPLISP*QRHTSW
Trigger: CCAGCTCGTATGCCTCTGGCATGGGGAAATTAAGGG...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
3UTR-3UTR GCA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATCCCTTAATTTCCCCATaGCAGAGGCATACGAGCTGG +
Preference number: 2 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNPLISP*QRHTSW
Trigger: CCAGCTCGTATGCCTCTGGCATGGGGAAATTAAGGG...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
3UTR-3UTR GCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTATCATCTCATCTTACATaGAAACAGACACTGTTCCCT +
Preference number: 2 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLSSHLT*KQTLFP
Trigger: AGGGAACAGTGTCTGTTTGCATGTAAGATGAGATGA...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
3UTR-3UTR GCA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACCCCTTAATTTCCCCATaGCAGAGGCATACGAGCTGG +
Preference number: 2 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHPLISP*QRHTSW
Trigger: CCAGCTCGTATGCCTCTGGCATGGGGAAATTAAGGG...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
3UTR-3UTR GCA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTTCATCTCATCTTACATaGAAACAGACACTGTTCCCT +
Preference number: 2 (lower is better)
Translates to: ATLVQECPVSFPGYRWISSSHLT*KQTLFP
Trigger: AGGGAACAGTGTCTGTTTGCATGTAAGATGAGATGA...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
3UTR CAA 90 bp AAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTaGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGT +
Preference number: 2 (lower is better)
Translates to: KYCANANSVPNFMRM*QRTALCHLSTGMSC
Trigger: ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCGCAATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
3UTR CAA 90 bp AGCACTCCAAGCTACACCTATGTATTTGCCTCTAACTTTCACACGTaGTCAGTTTCCTTCCCTCTAATATTCCACCACTGGGCCTTCTAT +
Preference number: 2 (lower is better)
Translates to: STPSYTYVFASNFHT*SVSFPLIFHHWAFY
Trigger: ATAGAAGGCCCAGTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAATACATAGGTGTAGCTTGGAGTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
3UTR-3UTR GCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGCCCTTAATTTCCCCATaGCAGAGGCATACGAGCTGG +
Preference number: 2 (lower is better)
Translates to: PANLMILACIRVCFCRVKPLISP*QRHTSW
Trigger: CCAGCTCGTATGCCTCTGGCATGGGGAAATTAAGGG...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
3UTR-3UTR GCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTTCATCTCATCTTACATaGAAACAGACACTGTTCCCT +
Preference number: 2 (lower is better)
Translates to: HPSHSHKYCANANSVPNFSSHLT*KQTLFP
Trigger: AGGGAACAGTGTCTGTTTGCATGTAAGATGAGATGA...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
3UTR-3UTR GCA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACCAAAGGACAGCTCTGTaGCACCTTAGTACAGGAATG +
Preference number: 2 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHQRTAL*HLSTGM
Trigger: CATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTG...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
3UTR-3UTR CCA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATCAGAGGCATACGAGCTaGCAGGTATGCATACAAAAA +
Preference number: 2 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNQRHTS*QVCIQK
Trigger: TTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTG...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
3UTR-3UTR CCA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCAGAGGCATACGAGCTaGCAGGTATGCATACAAAAA +
Preference number: 2 (lower is better)
Translates to: QCELCAQFYENVAKDSSVQRHTS*QVCIQK
Trigger: TTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTG...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
3UTR-3UTR CCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTTTCCCAGGCTACAGATaGATCAGTAGTATTGATCTC +
Preference number: 2 (lower is better)
Translates to: RQCELCAQFYENVAKDSSFPGYR*ISSIDL
Trigger: GAGATCAATACTACTGATCCATCTGTAGCCTGGGAA...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
3UTR-3UTR GCA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTCCCTTAATTTCCCCATaGCAGAGGCATACGAGCTGG +
Preference number: 2 (lower is better)
Translates to: VKLFNSWATHLSVLASTFPLISP*QRHTSW
Trigger: CCAGCTCGTATGCCTCTGGCATGGGGAAATTAAGGG...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
3UTR-3UTR GCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTTCATCTCATCTTACATaGAAACAGACACTGTTCCCT +
Preference number: 2 (lower is better)
Translates to: RQCELCAQFYENVAKDSSSSHLT*KQTLFP
Trigger: AGGGAACAGTGTCTGTTTGCATGTAAGATGAGATGA...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
3UTR-3UTR CCA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGTTCCCAGGCTACAGATaGATCAGTAGTATTGATCTC +
Preference number: 2 (lower is better)
Translates to: QCELCAQFYENVAKDSSVFPGYR*ISSIDL
Trigger: GAGATCAATACTACTGATCCATCTGTAGCCTGGGAA...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
3UTR-3UTR CCA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATTTCCCAGGCTACAGATaGATCAGTAGTATTGATCTC +
Preference number: 2 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNFPGYR*ISSIDL
Trigger: GAGATCAATACTACTGATCCATCTGTAGCCTGGGAA...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
3UTR-3UTR GCA 90 bp GAGTTAGTTAGTGAATACAATGGTATATTAGATACCAGCACTCCAAGCTACACCCAAAGGACAGCTCTGTaGCACCTTAGTACAGGAATG +
Preference number: 2 (lower is better)
Translates to: ELVSEYNGILDTSTPSYTQRTAL*HLSTGM
Trigger: CATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTG...GGTGTAGCTTGGAGTGCTGGTATCTAATATACCATTGTATTCACTAACTAACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
3UTR-3UTR GCA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTCAAAGGACAGCTCTGTaGCACCTTAGTACAGGAATG +
Preference number: 2 (lower is better)
Translates to: VKLFNSWATHLSVLASTFQRTAL*HLSTGM
Trigger: CATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTG...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
3UTR-3UTR GCA 90 bp GAGTTAGTTAGTGAATACAATGGTATATTAGATACCAGCACTCCAAGCTACACCCACTCCCATAAATATTaGGCCAATGCGAACTCTGTG +
Preference number: 2 (lower is better)
Translates to: ELVSEYNGILDTSTPSYTHSHKY*ANANSV
Trigger: CACAGAGTTCGCATTGGCGCAATATTTATGGGAGTG...GGTGTAGCTTGGAGTGCTGGTATCTAATATACCATTGTATTCACTAACTAACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
3UTR-3UTR GCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGCACTCCCATAAATATTaGGCCAATGCGAACTCTGTG +
Preference number: 2 (lower is better)
Translates to: PANLMILACIRVCFCRVKHSHKY*ANANSV
Trigger: CACAGAGTTCGCATTGGCGCAATATTTATGGGAGTG...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
3UTR-3UTR GCA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATACTTATGCATATACCTaGCAACCTAATGATTCTTGC +
Preference number: 2 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNTYAYT*QPNDSC
Trigger: GCAAGAATCATTAGGTTGGCAGGTATATGCATAAGT...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
3UTR-3UTR TCA 90 bp GAGTTAGTTAGTGAATACAATGGTATATTAGATACCAGCACTCCAAGCTACACCCTGTGCCCAATTTTATaGGAATGTTGCAAAGGACAG +
Preference number: 2 (lower is better)
Translates to: ELVSEYNGILDTSTPSYTLCPIL*ECCKGQ
Trigger: CTGTCCTTTGCAACATTCTCATAAAATTGGGCACAG...GGTGTAGCTTGGAGTGCTGGTATCTAATATACCATTGTATTCACTAACTAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
3UTR-3UTR GCA 90 bp AATATCACGGATATAGACTTCAAGGTTAAATTGTTCAATTCATGGGCCACACACCACTCCCATAAATATTaGGCCAATGCGAACTCTGTG +
Preference number: 2 (lower is better)
Translates to: NITDIDFKVKLFNSWATHHSHKY*ANANSV
Trigger: CACAGAGTTCGCATTGGCGCAATATTTATGGGAGTG...GTGTGTGGCCCATGAATTGAACAATTTAACCTTGAAGTCTATATCCGTGATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
3UTR-3UTR GCA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACACTTATGCATATACCTaGCAACCTAATGATTCTTGC +
Preference number: 2 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHTYAYT*QPNDSC
Trigger: GCAAGAATCATTAGGTTGGCAGGTATATGCATAAGT...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
3UTR-3UTR GCA 90 bp GAGTTAGTTAGTGAATACAATGGTATATTAGATACCAGCACTCCAAGCTACACCGTATTGTGCTTCCAGTaGCCCCAGAAGGATTTTAAT +
Preference number: 2 (lower is better)
Translates to: ELVSEYNGILDTSTPSYTVLCFQ*PQKDFN
Trigger: ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATAC...GGTGTAGCTTGGAGTGCTGGTATCTAATATACCATTGTATTCACTAACTAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
3UTR-3UTR CCA 90 bp AATATCACGGATATAGACTTCAAGGTTAAATTGTTCAATTCATGGGCCACACACCAGAGGCATACGAGCTaGCAGGTATGCATACAAAAA +
Preference number: 2 (lower is better)
Translates to: NITDIDFKVKLFNSWATHQRHTS*QVCIQK
Trigger: TTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTG...GTGTGTGGCCCATGAATTGAACAATTTAACCTTGAAGTCTATATCCGTGATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
3UTR-3UTR CCA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTCAGAGGCATACGAGCTaGCAGGTATGCATACAAAAA +
Preference number: 2 (lower is better)
Translates to: VKLFNSWATHLSVLASTFQRHTS*QVCIQK
Trigger: TTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTG...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
3UTR-3UTR CCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGTTCCCAGGCTACAGATaGATCAGTAGTATTGATCTC +
Preference number: 2 (lower is better)
Translates to: PANLMILACIRVCFCRVKFPGYR*ISSIDL
Trigger: GAGATCAATACTACTGATCCATCTGTAGCCTGGGAA...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
3UTR-3UTR GCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGTCATCTCATCTTACATaGAAACAGACACTGTTCCCT +
Preference number: 2 (lower is better)
Translates to: PANLMILACIRVCFCRVKSSHLT*KQTLFP
Trigger: AGGGAACAGTGTCTGTTTGCATGTAAGATGAGATGA...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
3UTR-3UTR CCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTCAGAGGCATACGAGCTaGCAGGTATGCATACAAAAA +
Preference number: 2 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCQRHTS*QVCIQK
Trigger: TTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTG...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
3UTR-3UTR CCA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTTTCCCAGGCTACAGATaGATCAGTAGTATTGATCTC +
Preference number: 2 (lower is better)
Translates to: VKLFNSWATHLSVLASTFFPGYR*ISSIDL
Trigger: GAGATCAATACTACTGATCCATCTGTAGCCTGGGAA...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
3UTR-3UTR GCA 90 bp AATATCACGGATATAGACTTCAAGGTTAAATTGTTCAATTCATGGGCCACACACTCATCTCATCTTACATaGAAACAGACACTGTTCCCT +
Preference number: 2 (lower is better)
Translates to: NITDIDFKVKLFNSWATHSSHLT*KQTLFP
Trigger: AGGGAACAGTGTCTGTTTGCATGTAAGATGAGATGA...GTGTGTGGCCCATGAATTGAACAATTTAACCTTGAAGTCTATATCCGTGATATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
3UTR-3UTR GCA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTACTTATGCATATACCTaGCAACCTAATGATTCTTGC +
Preference number: 2 (lower is better)
Translates to: VKLFNSWATHLSVLASTFTYAYT*QPNDSC
Trigger: GCAAGAATCATTAGGTTGGCAGGTATATGCATAAGT...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
3UTR-3UTR GCA 90 bp GAGTTAGTTAGTGAATACAATGGTATATTAGATACCAGCACTCCAAGCTACACCTGGCTAGTACATTTTTaGACTGAAACAGAAGCAATA +
Preference number: 2 (lower is better)
Translates to: ELVSEYNGILDTSTPSYTWLVHF*TETEAI
Trigger: TATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCA...GGTGTAGCTTGGAGTGCTGGTATCTAATATACCATTGTATTCACTAACTAACTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
3UTR-3UTR CAA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACAGATTGGTCACCGTATaGTGCTTCCAGTGCCCCCAG +
Preference number: 3 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHRLVTV*CFQCPQ
Trigger: CTGGGGGCACTGGAAGCACAATACGGTGACCAATCT...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
3UTR TCA 72 bp AATATTGCGCCAATGCGAACTCTGTGCCCAATTTTATaGGAATGTTGCAAAGGACAGCTCTGTGCCACCTTA +
Preference number: 3 (lower is better)
Translates to: NIAPMRTLCPIL*ECCKGQLCATL
Trigger: TAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCGCAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
3UTR-3UTR CAA 90 bp GAGTTAGTTAGTGAATACAATGGTATATTAGATACCAGCACTCCAAGCTACACCTCTAACTTTCACACGTaGTCAGTTTCCTTCCCTCTA +
Preference number: 3 (lower is better)
Translates to: ELVSEYNGILDTSTPSYTSNFHT*SVSFPL
Trigger: TAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGA...GGTGTAGCTTGGAGTGCTGGTATCTAATATACCATTGTATTCACTAACTAACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
3UTR CCA 72 bp ACGGATATAGACTTCAAGGTTAAATTGTTCAATTCATaGGCCACACACTTAAGCGTATTGGCTAGTACATTT +
Preference number: 3 (lower is better)
Translates to: TDIDFKVKLFNS*ATHLSVLASTF
Trigger: AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAACCTTGAAGTCTATATCCGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
3UTR TCA 72 bp ACACACTTAAGCGTATTGGCTAGTACATTTTTGCACTaGAACAGAAGCAATACAAGTTTTATGTTCTACCAT +
Preference number: 3 (lower is better)
Translates to: THLSVLASTFLH*NRSNTSFMFYH
Trigger: ATGGTAGAACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGCTTAAGTGTGT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTGAGCTGCCCGGCCCCTaGTGGCCCCTGCAGTCCGGT +
Preference number: 4 (lower is better)
Translates to: ATLVQECPVSFPGYRWISELPGP*WPLQSG
Trigger: ACCGGACTGCAGGGGCCATCAGGGGCCGGGCAGCTC...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTAGTGTATGACTCGAGCTaGCCGGCCCCTGATGGCCCC +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLVYDSS*PAPDGP
Trigger: GGGGCCATCAGGGGCCGGGCAGCTCGAGTCATACAC...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTGACAAGGGCAGCAGCTaGTGCAGCCGCCTCTGGCCG +
Preference number: 4 (lower is better)
Translates to: ATLVQECPVSFPGYRWISDKGSS*CSRLWP
Trigger: CGGCCAGAGGCGGCTGCAGCAGCTGCTGCCCTTGTC...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402739.9
ENST00000496558.5
CDS-3UTR GCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACCTGCCGCACGGCGTTaGACTCCGCCACGATCCTCT +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLPAARR*TPPRSS
Trigger: AGAGGATCGTGGCGGAGTGCAACGCCGTGCGGCAGG...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTTGCTGCAGCCGCCTCTaGCCGAGGTGCGGTGCCGCC +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFCCSRL*PRCGAA
Trigger: GGCGGCACCGCACCTCGGCCAGAGGCGGCTGCAGCA...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402739.9
ENST00000496558.5
CDS-3UTR TCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTGAGCTGCCCGGCCCCTaGTGGCCCCTGCAGTCCGGT +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCELPGP*WPLQSG
Trigger: ACCGGACTGCAGGGGCCATCAGGGGCCGGGCAGCTC...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTGTGTATGACTCGAGCTaGCCGGCCCCTGATGGCCCC +
Preference number: 4 (lower is better)
Translates to: ATLVQECPVSFPGYRWISVYDSS*PAPDGP
Trigger: GGGGCCATCAGGGGCCGGGCAGCTCGAGTCATACAC...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTCCGCCCGTACCATGGTaGCGCGCTTTACCGACGAGC +
Preference number: 4 (lower is better)
Translates to: ATLVQECPVSFPGYRWISPPVPW*RALPTS
Trigger: GCTCGTCGGTAAAGCGCGGCACCATGGTACGGGCGG...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR GCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTAGGAGAGCAAAGCCCTTaGCGCCCGTACCATGGTGCC +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLGEQSP*RPYHGA
Trigger: GGCACCATGGTACGGGCGGCAAGGGCTTTGCTCTCC...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTCAGCCAGCTCGCCGATaGCCGTGTGGCCCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: ATLVQECPVSFPGYRWISQPARR*PCGPWL
Trigger: AAGCCAAGGGCCACACGGGCATCGGCGAGCTGGCTG...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTTGCTGCAGCCGCCTCTaGCCGAGGTGCGGTGCCGCC +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCCCSRL*PRCGAA
Trigger: GGCGGCACCGCACCTCGGCCAGAGGCGGCTGCAGCA...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402739.9
ENST00000496558.5
CDS-3UTR CCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACCCTCTGTGGGTCGGTaGGAGTTTCTCGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLPSVGR*EFLASS
Trigger: GGAGGAGGCGAGAAACTCCCACCGACCCACAGAGGG...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402739.9
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CCA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTTGCCCGTGTGGCCCTTaGCTTCGTCAGTGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: ATLVQECPVSFPGYRWISCPCGP*LRQWAR
Trigger: CCTCGCCCACTGACGAAGCCAAGGGCCACACGGGCA...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTCCATGTCCGCCAGGATaGGTAAGCGTGTCACCGCGG +
Preference number: 4 (lower is better)
Translates to: ATLVQECPVSFPGYRWISPCPPG*VSVSPR
Trigger: CCGCGGTGACACGCTTACTCATCCTGGCGGACATGG...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTCGCCATGATGGCCCGTaGGCTCTGCCCTGCAATGAG +
Preference number: 4 (lower is better)
Translates to: ATLVQECPVSFPGYRWISRHDGP*ALPCNE
Trigger: CTCATTGCAGGGCAGAGCGCACGGGCCATCATGGCG...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTAGAGCAGCATTGGAGATaGCGGCGATGGCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLEQHWR*RRWPPG
Trigger: TCCAGGAGGCCATCGCCGGCATCTCCAATGCTGCTC...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CCA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTTCGCCGATGCCCGTGTaGCCCTTGGCTTCGTCAGTG +
Preference number: 4 (lower is better)
Translates to: ATLVQECPVSFPGYRWISSPMPV*PLASSV
Trigger: CACTGACGAAGCCAAGGGCCACACGGGCATCGGCGA...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTTCGCTGAGCAGGTCCTaGAGCGCCTGCCGCACGGCG +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCSLSRS*SACRTA
Trigger: CGCCGTGCGGCAGGCGCTCCAGGACCTGCTCAGCGA...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR TCA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACGAGCTGCCCGGCCCCTaGTGGCCCCTGCAGTCCGGT +
Preference number: 4 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHELPGP*WPLQSG
Trigger: ACCGGACTGCAGGGGCCATCAGGGGCCGGGCAGCTC...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR TCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACGCTCTGCCCTGCAATaGGCTGGTCATCCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLRSALQ*AGHPQS
Trigger: AGACTGAGGATGACCAGCTCATTGCAGGGCAGAGCG...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTAGGTCCTGGAGCGCCTaGCGCACGGCGTTGCACTCC +
Preference number: 4 (lower is better)
Translates to: RQCELCAQFYENVAKDSSRSWSA*RTALHS
Trigger: GGAGTGCAACGCCGTGCGGCAGGCGCTCCAGGACCT...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACGTAGCGGCGACATCTaGGTGGCGGAGAAATGCTTG +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLRSGDI*VAEKCL
Trigger: CAAGCATTTCTCCGCCACCCAGATGTCGCCGCTACG...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACTAAGGCTGTGCTGCTaGGAGTGCCATCAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLLRLCC*ECHQGG
Trigger: CCCTCCTTGATGGCACTCCCAGCAGCACAGCCTTAG...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466387.5
CDS-3UTR TCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACCAGCCCTGACACAATaGGCTCTCCTCCCAGATTCT +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLPALTQ*ALLPDS
Trigger: AGAATCTGGGAGGAGAGCTCATTGTGTCAGGGCTGG...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343114.7
ENST00000466387.5
ENST00000496558.5
ENST00000541047.5
CDS-3UTR TCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTAAGGTGGGTAGAAAGTTaGCTAGCCCTGCCCCCATCT +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLRWVES*LALPPS
Trigger: AGATGGGGGCAGGGCTAGTCAACTTTCTACCCACCT...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361291.8
ENST00000402739.9
CDS-3UTR TCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTATATTCATGTACTCGCTaGGCAGGTCCTGGAGCGCCT +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLYSCTR*AGPGAP
Trigger: AGGCGCTCCAGGACCTGCTCAGCGAGTACATGAATA...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR GCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGTATGACTCGAGCTaGCCGGCCCCTGATGGCCCC +
Preference number: 4 (lower is better)
Translates to: RQCELCAQFYENVAKDSSVYDSS*PAPDGP
Trigger: GGGGCCATCAGGGGCCGGGCAGCTCGAGTCATACAC...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTGTGTATGACTCGAGCTaGCCGGCCCCTGATGGCCCC +
Preference number: 4 (lower is better)
Translates to: FPHARGIRAGRYAYKNGIVYDSS*PAPDGP
Trigger: GGGGCCATCAGGGGCCGGGCAGCTCGAGTCATACAC...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTAGCCCCTCGGGCGGCTaGCATCTCATCCCGACAGTG +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCSPSGG*HLIPTV
Trigger: CACTGTCGGGATGAGATGGCAGCCGCCCGAGGGGCT...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR GCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTGTCGGCCATCAGCGCTaGGCCGCTGATGATGCTCTC +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFVGHQR*AADDAL
Trigger: GAGAGCATCATCAGCGGCGCAGCGCTGATGGCCGAC...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR GCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCCTGCCGCACGGCGTTaGACTCCGCCACGATCCTCT +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCPAARR*TPPRSS
Trigger: AGAGGATCGTGGCGGAGTGCAACGCCGTGCGGCAGG...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAAGGTCCTGGAGCGCCTaGCGCACGGCGTTGCACTCC +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTRSWSA*RTALHS
Trigger: GGAGTGCAACGCCGTGCGGCAGGCGCTCCAGGACCT...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACACAGGCTGTCAATCTaGGTGGCTGCCATCCGAACT +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLHRLSI*VAAIRT
Trigger: AGTTCGGATGGCAGCCACCCAGATTGACAGCCTGTG...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTAGCGGCATTGATGACCTaGGGACACAGGCTGTCAATC +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLAALMT*GHRLSI
Trigger: GATTGACAGCCTGTGTCCCCAGGTCATCAATGCCGC...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTAACAGACTTTGCCTACTaGCTGGAGTGGCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLTDFAY*LEWPSP
Trigger: TGGAGAAGGCCACTCCAGTCAGTAGGCAAAGTCTGT...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000540488.5
CDS-3UTR TCA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTAGTCATCCACTGAGGTaGTGTCATCCACGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: ATLVQECPVSFPGYRWISSHPLR*CHPRPL
Trigger: CAGAGGCCGTGGATGACATCACCTCAGTGGATGACT...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGGAGCTGCCCGGCCCCTaGTGGCCCCTGCAGTCCGGT +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKELPGP*WPLQSG
Trigger: ACCGGACTGCAGGGGCCATCAGGGGCCGGGCAGCTC...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GAGTTAGTTAGTGAATACAATGGTATATTAGATACCAGCACTCCAAGCTACACCGAGCTGCCCGGCCCCTaGTGGCCCCTGCAGTCCGGT +
Preference number: 4 (lower is better)
Translates to: ELVSEYNGILDTSTPSYTELPGP*WPLQSG
Trigger: ACCGGACTGCAGGGGCCATCAGGGGCCGGGCAGCTC...GGTGTAGCTTGGAGTGCTGGTATCTAATATACCATTGTATTCACTAACTAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR TCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTAGGCGAGAGGCATCGATaGACTCATTCTCCTCAAACG +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLGERHR*THSPQT
Trigger: CGTTTGAGGAGAATGAGTTCATCGATGCCTCTCGCC...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTATCAGCACAGCCTTTCTaGTGTCCCGAACGCCATCAT +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLSAQPF*CPERHH
Trigger: ATGATGGCGTTCGGGACATCAGAAAGGCTGTGCTGA...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTCCAGCCCTGACACAATaGGCTCTCCTCCCAGATTCT +
Preference number: 4 (lower is better)
Translates to: ATLVQECPVSFPGYRWISPALTQ*ALLPDS
Trigger: AGAATCTGGGAGGAGAGCTCATTGTGTCAGGGCTGG...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343114.7
ENST00000466387.5
ENST00000496558.5
ENST00000541047.5
CDS-3UTR TCA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTCCAAGACACAACAGGTaGGTTGACAGCTGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: ATLVQECPVSFPGYRWISPRHNR*VDSCCP
Trigger: GGGACAGCAGCTGTCAACTCACCTGTTGTGTCTTGG...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTATGGCGGAGAAATGCTTaGGAGGCCGTGTACAGCATT +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLWRRNA*EAVYSI
Trigger: AATGCTGTACACGGCCTCTCAAGCATTTCTCCGCCA...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR TCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTGTGGGCGAGGTAGCTTaGGCAGCATTGGAGATGCCG +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFVGEVA*AALEMP
Trigger: CGGCATCTCCAATGCTGCTCAAGCTACCTCGCCCAC...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR TCA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTGGAACCTGGCCTCGCTaGACGTCATGGGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: FPHARGIRAGRYAYKNGIGTWPR*TSWGPG
Trigger: TCCTGGACCCCATGACGTTCAGCGAGGCCAGGTTCC...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTTATCCTGAGCAACTTTaGTCTGTGGCCGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: ATLVQECPVSFPGYRWISYPEQL*SVAGQP
Trigger: TGGCTGCCCGGCCACAGAGCAAAGTTGCTCAGGATA...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGGTGTATGACTCGAGCTaGCCGGCCCCTGATGGCCCC +
Preference number: 4 (lower is better)
Translates to: QCELCAQFYENVAKDSSVVYDSS*PAPDGP
Trigger: GGGGCCATCAGGGGCCGGGCAGCTCGAGTCATACAC...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTATGGCCCGTGCGCTCTaGCCTGCAATGAGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFMARAL*PAMSWS
Trigger: TGACCAGCTCATTGCAGGGCAGAGCGCACGGGCCAT...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTCGCCATGATGGCCCGTaGGCTCTGCCCTGCAATGAG +
Preference number: 4 (lower is better)
Translates to: FPHARGIRAGRYAYKNGIRHDGP*ALPCNE
Trigger: CTCATTGCAGGGCAGAGCGCACGGGCCATCATGGCG...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTCGCCATGATGGCCCGTaGGCTCTGCCCTGCAATGAG +
Preference number: 4 (lower is better)
Translates to: RQCELCAQFYENVAKDSSRHDGP*ALPCNE
Trigger: CTCATTGCAGGGCAGAGCGCACGGGCCATCATGGCG...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCGCCATGATGGCCCGTaGGCTCTGCCCTGCAATGAG +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCRHDGP*ALPCNE
Trigger: CTCATTGCAGGGCAGAGCGCACGGGCCATCATGGCG...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTTCCTCCTGCGGTAGTTaGGCCATGATGGCCCGTGCG +
Preference number: 4 (lower is better)
Translates to: FPHARGIRAGRYAYKNGISSCGS*AMMARA
Trigger: CGCACGGGCCATCATGGCGCAACTACCGCAGGAGGA...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTTCCTCCTGCGGTAGTTaGGCCATGATGGCCCGTGCG +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCSSCGS*AMMARA
Trigger: CGCACGGGCCATCATGGCGCAACTACCGCAGGAGGA...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTATTTGCCTTCTCCTCCTaGGGTAGTTGCGCCATGATG +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLFAFSS*GSCAMM
Trigger: CATCATGGCGCAACTACCGCAGGAGGAGAAGGCAAA...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATCCGCCCGTACCATGGTaGCGCGCTTTACCGACGAGC +
Preference number: 4 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNPPVPW*RALPTS
Trigger: GCTCGTCGGTAAAGCGCGGCACCATGGTACGGGCGG...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
CDS-3UTR GCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACACCGCCCGTACCATGGTaGCGCGCTTTACCGACGAGC +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTPPVPW*RALPTS
Trigger: GCTCGTCGGTAAAGCGCGGCACCATGGTACGGGCGG...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR GCA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTGGAGAGCAAAGCCCTTaGCGCCCGTACCATGGTGCC +
Preference number: 4 (lower is better)
Translates to: FPHARGIRAGRYAYKNGIGEQSP*RPYHGA
Trigger: GGCACCATGGTACGGGCGGCAAGGGCTTTGCTCTCC...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR GCA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGAGCCCCTCGGGCGGCTaGCATCTCATCCCGACAGTG +
Preference number: 4 (lower is better)
Translates to: QCELCAQFYENVAKDSSVSPSGG*HLIPTV
Trigger: CACTGTCGGGATGAGATGGCAGCCGCCCGAGGGGCT...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTTGGGTGGCGGAGAAATaGTTGAGAGGCCGTGTACAG +
Preference number: 4 (lower is better)
Translates to: ATLVQECPVSFPGYRWISWVAEK*LRGRVQ
Trigger: CTGTACACGGCCTCTCAAGCATTTCTCCGCCACCCA...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR GCA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATCAGCCAGCTCGCCGATaGCCGTGTGGCCCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNQPARR*PCGPWL
Trigger: AAGCCAAGGGCCACACGGGCATCGGCGAGCTGGCTG...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
CDS-3UTR GCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTCGGCCATCAGCGCTaGGCCGCTGATGATGCTCTC +
Preference number: 4 (lower is better)
Translates to: RQCELCAQFYENVAKDSSVGHQR*AADDAL
Trigger: GAGAGCATCATCAGCGGCGCAGCGCTGATGGCCGAC...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR GCA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATCCTGCCGCACGGCGTTaGACTCCGCCACGATCCTCT +
Preference number: 4 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNPAARR*TPPRSS
Trigger: AGAGGATCGTGGCGGAGTGCAACGCCGTGCGGCAGG...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
CDS-3UTR GCA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCTGCCGCACGGCGTTaGACTCCGCCACGATCCTCT +
Preference number: 4 (lower is better)
Translates to: QCELCAQFYENVAKDSSVPAARR*TPPRSS
Trigger: AGAGGATCGTGGCGGAGTGCAACGCCGTGCGGCAGG...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CCA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTCACAGGCTGTCAATCTaGGTGGCTGCCATCCGAACT +
Preference number: 4 (lower is better)
Translates to: ATLVQECPVSFPGYRWISHRLSI*VAAIRT
Trigger: AGTTCGGATGGCAGCCACCCAGATTGACAGCCTGTG...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTATCCACATCGCCCTCTTaGAGGGCTATCACACACTTG +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLSTSPS*RAITHL
Trigger: CAAGTGTGTGATAGCCCTCCAAGAGGGCGATGTGGA...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTAACGGTTGAGGAACGTTaGCACTCAGGGCTTCAATGG +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLTVEER*HSGLQW
Trigger: CCATTGAAGCCCTGAGTGCCAACGTTCCTCAACCGT...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTATCCCTCAGCACAGGTTaGGAGGTGGGTAGAAAGTTG +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLSLSTG*EVGRKL
Trigger: CAACTTTCTACCCACCTCCCAACCTGTGCTGAGGGA...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361291.8
ENST00000402739.9
CDS-3UTR CCA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTCCCTCTGTGGGTCGGTaGGAGTTTCTCGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: FPHARGIRAGRYAYKNGIPSVGR*EFLASS
Trigger: GGAGGAGGCGAGAAACTCCCACCGACCCACAGAGGG...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000402739.9
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTTTGCCGCCCGTACCATaGTGCCGCGCTTTACCGACG +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCLPPVP*CRALPT
Trigger: CGTCGGTAAAGCGCGGCACCATGGTACGGGCGGCAA...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACATGCCCGTGTGGCCCTTaGCTTCGTCAGTGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTCPCGP*LRQWAR
Trigger: CCTCGCCCACTGACGAAGCCAAGGGCCACACGGGCA...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGCTCTGCCCGCCCGCCTaGGTCTCCGCCTCACTCGGG +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKLCPPA*VSASLG
Trigger: CCCGAGTGAGGCGGAGACCCAGGCGGGCGGGCAGAG...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496558.5
CDS-3UTR TCA 90 bp AATATCACGGATATAGACTTCAAGGTTAAATTGTTCAATTCATGGGCCACACACGAGCTGCCCGGCCCCTaGTGGCCCCTGCAGTCCGGT +
Preference number: 4 (lower is better)
Translates to: NITDIDFKVKLFNSWATHELPGP*WPLQSG
Trigger: ACCGGACTGCAGGGGCCATCAGGGGCCGGGCAGCTC...GTGTGTGGCCCATGAATTGAACAATTTAACCTTGAAGTCTATATCCGTGATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR TCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTCGCTCTGCCCTGCAATaGGCTGGTCATCCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFRSALQ*AGHPQS
Trigger: AGACTGAGGATGACCAGCTCATTGCAGGGCAGAGCG...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGGCACTGTCCAGCCCTaGCACAATGAGCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RQCELCAQFYENVAKDSSGTVQP*HNELSS
Trigger: GGAGGAGAGCTCATTGTGTCAGGGCTGGACAGTGCC...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343114.7
ENST00000466387.5
ENST00000496558.5
ENST00000541047.5
CDS-3UTR TCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTAACACAACAGGTGAGTTaGCAGCTGCTGTCCCATAGA +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLTQQVS*QLLSHR
Trigger: TCTATGGGACAGCAGCTGTCAACTCACCTGTTGTGT...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACCCTGCCCCCATCTATaGCATCACAATCTACCTCAT +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLPCPHL*HHNLPH
Trigger: ATGAGGTAGATTGTGATGTCATAGATGGGGGCAGGG...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361291.8
ENST00000402739.9
CDS-3UTR TCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTAGGGATAAAAGTCTCATaGCATCTGCCATGTCCGCCA +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLGIKVS*HLPCPP
Trigger: TGGCGGACATGGCAGATGTCATGAGACTTTTATCCC...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTATCTCATCCCGACAGTaGGGATCCTTCAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: ATLVQECPVSFPGYRWISISSRQ*GSFSSC
Trigger: ACAGGAGCTGAAGGATCCTCACTGTCGGGATGAGAT...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTTGGCGGAGAAATGCTTaGGAGGCCGTGTACAGCATT +
Preference number: 4 (lower is better)
Translates to: ATLVQECPVSFPGYRWISWRRNA*EAVYSI
Trigger: AATGCTGTACACGGCCTCTCAAGCATTTCTCCGCCA...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR TCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTGTGGGCGAGGTAGCTTaGGCAGCATTGGAGATGCCG +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCVGEVA*AALEMP
Trigger: CGGCATCTCCAATGCTGCTCAAGCTACCTCGCCCAC...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR TCA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATGGAACCTGGCCTCGCTaGACGTCATGGGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNGTWPR*TSWGPG
Trigger: TCCTGGACCCCATGACGTTCAGCGAGGCCAGGTTCC...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
CDS-3UTR TCA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGGGAACCTGGCCTCGCTaGACGTCATGGGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: QCELCAQFYENVAKDSSVGTWPR*TSWGPG
Trigger: TCCTGGACCCCATGACGTTCAGCGAGGCCAGGTTCC...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR TCA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTGTGGCACTGTCCAGCTaGTCAGCCACAGCACGAGCT +
Preference number: 4 (lower is better)
Translates to: FPHARGIRAGRYAYKNGIVALSS*SATARA
Trigger: AGCTCGTGCTGTGGCTGATCAGCTGGACAGTGCCAC...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000540488.5
ENST00000629316.2
CDS-3UTR GCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTCCGTGCGCTCTGCCCTaGAATGAGCTGGTCATCCTC +
Preference number: 4 (lower is better)
Translates to: RQCELCAQFYENVAKDSSPCALP*NELVIL
Trigger: GAGGATGACCAGCTCATTGCAGGGCAGAGCGCACGG...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTATGGCCCGTGCGCTCTaGCCTGCAATGAGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCMARAL*PAMSWS
Trigger: TGACCAGCTCATTGCAGGGCAGAGCGCACGGGCCAT...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATCGCCATGATGGCCCGTaGGCTCTGCCCTGCAATGAG +
Preference number: 4 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNRHDGP*ALPCNE
Trigger: CTCATTGCAGGGCAGAGCGCACGGGCCATCATGGCG...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR GCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACATCCTCCTGCGGTAGTTaGGCCATGATGGCCCGTGCG +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTSSCGS*AMMARA
Trigger: CGCACGGGCCATCATGGCGCAACTACCGCAGGAGGA...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTTTTGCCTTCTCCTCCTaGGGTAGTTGCGCCATGATG +
Preference number: 4 (lower is better)
Translates to: ATLVQECPVSFPGYRWISFAFSS*GSCAMM
Trigger: CATCATGGCGCAACTACCGCAGGAGGAGAAGGCAAA...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTCCCTTAATTTCCCCATaGCAGAGGCATACGAGCTGG +
Preference number: 4 (lower is better)
Translates to: ATLVQECPVSFPGYRWISPLISP*QRHTSW
Trigger: CCAGCTCGTATGCCTCTGGCATGGGGAAATTAAGGG...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTAAAGTCTCATGACATCTaGCATGTCCGCCAGGATGAG +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLKSHDI*HVRQDE
Trigger: CTCATCCTGGCGGACATGGCAGATGTCATGAGACTT...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR GCA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTGAGCAGCATTGGAGATaGCGGCGATGGCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: FPHARGIRAGRYAYKNGIEQHWR*RRWPPG
Trigger: TCCAGGAGGCCATCGCCGGCATCTCCAATGCTGCTC...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTAACTTTGCCTACTGACTaGAGTGGCCTTCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLTLPTD*SGLLHP
Trigger: TGGATGGAGAAGGCCACTCCAGTCAGTAGGCAAAGT...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000540488.5
CDS-3UTR CCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTAGGCTGTCAATCTGGGTaGCTGCCATCCGAACTAATT +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLGCQSG*LPSELI
Trigger: AATTAGTTCGGATGGCAGCCACCCAGATTGACAGCC...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTAGCAACTTTGCTCTGTaGCCGGGCAGCCAGTGTCAG +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFSNFAL*PGSQCQ
Trigger: CTGACACTGGCTGCCCGGCCACAGAGCAAAGTTGCT...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTAACCTGCTTCTCCCACTaGTCTTTGAAGACGTCCATG +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLTCFSH*SLKTSM
Trigger: CATGGACGTCTTCAAAGACCAGTGGGAGAAGCAGGT...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTACGGTTGAGGAACGTTaGCACTCAGGGCTTCAATGG +
Preference number: 4 (lower is better)
Translates to: ATLVQECPVSFPGYRWISTVEER*HSGLQW
Trigger: CCATTGAAGCCCTGAGTGCCAACGTTCCTCAACCGT...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTAGAGGCAGCTAGTACATaGGCTTTCTTTGACCTCCCT +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLEAAST*AFFDLP
Trigger: AGGGAGGTCAAAGAAAGCCCATGTACTAGCTGCCTC...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACATTGCCGCCCGTACCATaGTGCCGCGCTTTACCGACG +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTLPPVP*CRALPT
Trigger: CGTCGGTAAAGCGCGGCACCATGGTACGGGCGGCAA...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CCA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACTGCCCGTGTGGCCCTTaGCTTCGTCAGTGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHCPCGP*LRQWAR
Trigger: CCTCGCCCACTGACGAAGCCAAGGGCCACACGGGCA...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
CDS-3UTR CCA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGTCGCCGATGCCCGTGTaGCCCTTGGCTTCGTCAGTG +
Preference number: 4 (lower is better)
Translates to: QCELCAQFYENVAKDSSVSPMPV*PLASSV
Trigger: CACTGACGAAGCCAAGGGCCACACGGGCATCGGCGA...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CCA 90 bp GAGTTAGTTAGTGAATACAATGGTATATTAGATACCAGCACTCCAAGCTACACCTCGCTGAGCAGGTCCTaGAGCGCCTGCCGCACGGCG +
Preference number: 4 (lower is better)
Translates to: ELVSEYNGILDTSTPSYTSLSRS*SACRTA
Trigger: CGCCGTGCGGCAGGCGCTCCAGGACCTGCTCAGCGA...GGTGTAGCTTGGAGTGCTGGTATCTAATATACCATTGTATTCACTAACTAACTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
CDS-3UTR CCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGTCGCTGAGCAGGTCCTaGAGCGCCTGCCGCACGGCG +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKSLSRS*SACRTA
Trigger: CGCCGTGCGGCAGGCGCTCCAGGACCTGCTCAGCGA...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR TCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTATCTCCCACTGGTCTTTaGAGACGTCCATGTTATCCT +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLSPTGL*RRPCYP
Trigger: AGGATAACATGGACGTCTTCAAAGACCAGTGGGAGA...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTGAGCTGCCCGGCCCCTaGTGGCCCCTGCAGTCCGGT +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCELPGP*WPLQSG
Trigger: ACCGGACTGCAGGGGCCATCAGGGGCCGGGCAGCTC...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTCGCTCTGCCCTGCAATaGGCTGGTCATCCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: FPHARGIRAGRYAYKNGIRSALQ*AGHPQS
Trigger: AGACTGAGGATGACCAGCTCATTGCAGGGCAGAGCG...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTGCTTGGCCAGTACAATaGTATCATTGCCGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: ATLVQECPVSFPGYRWISAWPVQ*YHCRCR
Trigger: ACGACAGCGGCAATGATATCATTGTACTGGCCAAGC...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTAATCCTGCTTACATGCTaGATCAGGACACTGATCAGC +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLILLTC*IRTLIS
Trigger: GCTGATCAGTGTCCTGATTCAGCATGTAAGCAGGAT...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000541047.5
CDS-3UTR TCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTCCAAGACACAACAGGTaGGTTGACAGCTGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFPRHNR*VDSCCP
Trigger: GGGACAGCAGCTGTCAACTCACCTGTTGTGTCTTGG...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACCCATGTCCGCCAGGATaGGTAAGCGTGTCACCGCGG +
Preference number: 4 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHPCPPG*VSVSPR
Trigger: CCGCGGTGACACGCTTACTCATCCTGGCGGACATGG...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
CDS-3UTR TCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACCTCCTGGACTTGTTTaGACACATAATCTCGGTTGG +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLPPGLV*THNLGW
Trigger: CCAACCGAGATTATGTGTTCAAACAAGTCCAGGAGG...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR TCA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGGTGGGCGAGGTAGCTTaGGCAGCATTGGAGATGCCG +
Preference number: 4 (lower is better)
Translates to: QCELCAQFYENVAKDSSVVGEVA*AALEMP
Trigger: CGGCATCTCCAATGCTGCTCAAGCTACCTCGCCCAC...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGTGGCACTGTCCAGCTaGTCAGCCACAGCACGAGCT +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTVALSS*SATARA
Trigger: AGCTCGTGCTGTGGCTGATCAGCTGGACAGTGCCAC...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540488.5
ENST00000629316.2
CDS-3UTR GCA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCGTGCGCTCTGCCCTaGAATGAGCTGGTCATCCTC +
Preference number: 4 (lower is better)
Translates to: QCELCAQFYENVAKDSSVPCALP*NELVIL
Trigger: GAGGATGACCAGCTCATTGCAGGGCAGAGCGCACGG...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACACCGTGCGCTCTGCCCTaGAATGAGCTGGTCATCCTC +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTPCALP*NELVIL
Trigger: GAGGATGACCAGCTCATTGCAGGGCAGAGCGCACGG...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATATGGCCCGTGCGCTCTaGCCTGCAATGAGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNMARAL*PAMSWS
Trigger: TGACCAGCTCATTGCAGGGCAGAGCGCACGGGCCAT...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR GCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAATGGCCCGTGCGCTCTaGCCTGCAATGAGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTMARAL*PAMSWS
Trigger: TGACCAGCTCATTGCAGGGCAGAGCGCACGGGCCAT...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACCGCCATGATGGCCCGTaGGCTCTGCCCTGCAATGAG +
Preference number: 4 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHRHDGP*ALPCNE
Trigger: CTCATTGCAGGGCAGAGCGCACGGGCCATCATGGCG...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR GCA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACTCCTCCTGCGGTAGTTaGGCCATGATGGCCCGTGCG +
Preference number: 4 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHSSCGS*AMMARA
Trigger: CGCACGGGCCATCATGGCGCAACTACCGCAGGAGGA...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR GCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTAGTCCATTCGAGAACCTaGTTCGGCAATTTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLVHSRT*FGNFLG
Trigger: GCCAAGAAAATTGCCGAAGCAGGTTCTCGAATGGAC...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTTCTCCTCCCAGATTCTaGACTTCTGCCTTCACCTTG +
Preference number: 4 (lower is better)
Translates to: ATLVQECPVSFPGYRWISSPPRF*TSAFTL
Trigger: CAAGGTGAAGGCAGAAGTGCAGAATCTGGGAGGAGA...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000541047.5
CDS-3UTR GCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAAAGGACAGCTCTGTaGCACCTTAGTACAGGAATG +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLQRTAL*HLSTGM
Trigger: CATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTG...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTGCATGGAGGAATCACTaGTTCCACTCCCGATCGGAG +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFAWRNH*FHSRSE
Trigger: CTCCGATCGGGAGTGGAAGCAGTGATTCCTCCATGC...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361291.8
ENST00000402739.9
CDS-3UTR GCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGAGCAGCATTGGAGATaGCGGCGATGGCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTEQHWR*RRWPPG
Trigger: TCCAGGAGGCCATCGCCGGCATCTCCAATGCTGCTC...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR GCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGAGGTCCTGGAGCGCCTaGCGCACGGCGTTGCACTCC +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKRSWSA*RTALHS
Trigger: GGAGTGCAACGCCGTGCGGCAGGCGCTCCAGGACCT...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTCACAGGCTGTCAATCTaGGTGGCTGCCATCCGAACT +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFHRLSI*VAAIRT
Trigger: AGTTCGGATGGCAGCCACCCAGATTGACAGCCTGTG...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTAGCAACTTTGCTCTGTaGCCGGGCAGCCAGTGTCAG +
Preference number: 4 (lower is better)
Translates to: RQCELCAQFYENVAKDSSSNFAL*PGSQCQ
Trigger: CTGACACTGGCTGCCCGGCCACAGAGCAAAGTTGCT...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTAGCAACTTTGCTCTGTaGCCGGGCAGCCAGTGTCAG +
Preference number: 4 (lower is better)
Translates to: FPHARGIRAGRYAYKNGISNFAL*PGSQCQ
Trigger: CTGACACTGGCTGCCCGGCCACAGAGCAAAGTTGCT...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTAGCAACTTTGCTCTGTaGCCGGGCAGCCAGTGTCAG +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCSNFAL*PGSQCQ
Trigger: CTGACACTGGCTGCCCGGCCACAGAGCAAAGTTGCT...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTAAGGTTTTTAGCTGCCTaGATAAGCGATGTGGCACTG +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLRFLAA*ISDVAL
Trigger: CAGTGCCACATCGCTTATCCAGGCAGCTAAAAACCT...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGAATCACAGAAGGGACTaGAGAGGCGGCGGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: QCELCAQFYENVAKDSSVNHRRD*RGGGRD
Trigger: GTCCCTGCCGCCGCCTCTCCAGTCCCTTCTGTGATT...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402739.9
ENST00000496558.5
CDS-3UTR CCA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATAATCACAGAAGGGACTaGAGAGGCGGCGGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNNHRRD*RGGGRD
Trigger: GTCCCTGCCGCCGCCTCTCCAGTCCCTTCTGTGATT...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402739.9
ENST00000496558.5
CDS-3UTR CCA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACTTGCCGCCCGTACCATaGTGCCGCGCTTTACCGACG +
Preference number: 4 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHLPPVP*CRALPT
Trigger: CGTCGGTAAAGCGCGGCACCATGGTACGGGCGGCAA...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
CDS-3UTR CCA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTCGTAGCGGCGACATCTaGGTGGCGGAGAAATGCTTG +
Preference number: 4 (lower is better)
Translates to: FPHARGIRAGRYAYKNGIRSGDI*VAEKCL
Trigger: CAAGCATTTCTCCGCCACCCAGATGTCGCCGCTACG...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCGTAGCGGCGACATCTaGGTGGCGGAGAAATGCTTG +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCRSGDI*VAEKCL
Trigger: CAAGCATTTCTCCGCCACCCAGATGTCGCCGCTACG...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CCA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTCCACCGGGACTTGGATaGCTTCCCAAACTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: FPHARGIRAGRYAYKNGIPPGLG*LPKLGG
Trigger: CCCACCTAGTTTGGGAAGCCATCCAAGTCCCGGTGG...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541047.5
CDS-3UTR TCA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTTCCACTCCAGAACTGTaGACACACAGGGTAGGCACC +
Preference number: 4 (lower is better)
Translates to: FPHARGIRAGRYAYKNGISTPEL*THRVGT
Trigger: GGTGCCTACCCTGTGTGTTCACAGTTCTGGAGTGGA...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000540488.5
CDS-3UTR TCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTACAGACTTTGCCTACTaGCTGGAGTGGCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFTDFAY*LEWPSP
Trigger: TGGAGAAGGCCACTCCAGTCAGTAGGCAAAGTCTGT...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000540488.5
CDS-3UTR TCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTAGTCATCCACTGAGGTaGTGTCATCCACGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: RQCELCAQFYENVAKDSSSHPLR*CHPRPL
Trigger: CAGAGGCCGTGGATGACATCACCTCAGTGGATGACT...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTAGTCATCCACTGAGGTaGTGTCATCCACGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCSHPLR*CHPRPL
Trigger: CAGAGGCCGTGGATGACATCACCTCAGTGGATGACT...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTTCAGCACAGCCTTTCTaGTGTCCCGAACGCCATCAT +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFSAQPF*CPERHH
Trigger: ATGATGGCGTTCGGGACATCAGAAAGGCTGTGCTGA...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTGTTCTTCTGGGGTCCTaGTCATCAGCACAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFVLLGS*SSAQPF
Trigger: GAAAGGCTGTGCTGATGATCAGGACCCCAGAAGAAC...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACACGCTCTGCCCTGCAATaGGCTGGTCATCCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTRSALQ*AGHPQS
Trigger: AGACTGAGGATGACCAGCTCATTGCAGGGCAGAGCG...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTGGCCTTTGCCTCTTGTaGAGTCTGTCATTTCCATCA +
Preference number: 4 (lower is better)
Translates to: ATLVQECPVSFPGYRWISGLCLL*SLSFPS
Trigger: TGATGGAAATGACAGACTTCACAAGAGGCAAAGGCC...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTATCCTGCTTACATGCTaGATCAGGACACTGATCAGC +
Preference number: 4 (lower is better)
Translates to: ATLVQECPVSFPGYRWISILLTC*IRTLIS
Trigger: GCTGATCAGTGTCCTGATTCAGCATGTAAGCAGGAT...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000541047.5
CDS-3UTR TCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACTTCTGGTATTTGGTTaGGGCCACATAGGATGCTTT +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLLLVFG*GHIGCF
Trigger: AAAGCATCCTATGTGGCCTCAACCAAATACCAGAAG...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTCCAAGACACAACAGGTaGGTTGACAGCTGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: FPHARGIRAGRYAYKNGIPRHNR*VDSCCP
Trigger: GGGACAGCAGCTGTCAACTCACCTGTTGTGTCTTGG...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCCAAGACACAACAGGTaGGTTGACAGCTGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCPRHNR*VDSCCP
Trigger: GGGACAGCAGCTGTCAACTCACCTGTTGTGTCTTGG...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTCCTCCTGGACTTGTTTaGACACATAATCTCGGTTGG +
Preference number: 4 (lower is better)
Translates to: ATLVQECPVSFPGYRWISPPGLV*THNLGW
Trigger: CCAACCGAGATTATGTGTTCAAACAAGTCCAGGAGG...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR GCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTTATCCTGAGCAACTTTaGTCTGTGGCCGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCYPEQL*SVAGQP
Trigger: TGGCTGCCCGGCCACAGAGCAAAGTTGCTCAGGATA...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTTATCCTGAGCAACTTTaGTCTGTGGCCGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: RQCELCAQFYENVAKDSSYPEQL*SVAGQP
Trigger: TGGCTGCCCGGCCACAGAGCAAAGTTGCTCAGGATA...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTGTCAACACTCGGACCTaGTTCTCCCACTGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFVNTRT*FSHWSL
Trigger: CAAAGACCAGTGGGAGAAGCAGGTCCGAGTGTTGAC...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACATGGCCCGTGCGCTCTaGCCTGCAATGAGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHMARAL*PAMSWS
Trigger: TGACCAGCTCATTGCAGGGCAGAGCGCACGGGCCAT...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR GCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTTTTGCCTTCTCCTCCTaGGGTAGTTGCGCCATGATG +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFFAFSS*GSCAMM
Trigger: CATCATGGCGCAACTACCGCAGGAGGAGAAGGCAAA...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
50% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTCAAAGGACAGCTCTGTaGCACCTTAGTACAGGAATG +
Preference number: 4 (lower is better)
Translates to: ATLVQECPVSFPGYRWISQRTAL*HLSTGM
Trigger: CATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTG...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACACTCCCATAAATATTaGGCCAATGCGAACTCTGTG +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLHSHKY*ANANSV
Trigger: CACAGAGTTCGCATTGGCGCAATATTTATGGGAGTG...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTTTGGTCACCGTATTGTaGTTCCAGTGCCCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFLVTVL*FQCPQK
Trigger: CTTCTGGGGGCACTGGAAGCACAATACGGTGACCAA...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR GCA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTGACAAGGGCAGCAGCTaGTGCAGCCGCCTCTGGCCG +
Preference number: 4 (lower is better)
Translates to: VKLFNSWATHLSVLASTFDKGSS*CSRLWP
Trigger: CGGCCAGAGGCGGCTGCAGCAGCTGCTGCCCTTGTC...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402739.9
ENST00000496558.5
CDS-3UTR GCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTCGAGCAAGGGTCATCTaGAAACTCGGAGGAGGCGAT +
Preference number: 4 (lower is better)
Translates to: RQCELCAQFYENVAKDSSRARVI*KLGGGD
Trigger: ATCGCCTCCTCCGAGTTTGCAGATGACCCTTGCTCG...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR GCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTTGGGTGGCGGAGAAATaGTTGAGAGGCCGTGTACAG +
Preference number: 4 (lower is better)
Translates to: RQCELCAQFYENVAKDSSWVAEK*LRGRVQ
Trigger: CTGTACACGGCCTCTCAAGCATTTCTCCGCCACCCA...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTTCCTTCCAGTCTTTTTaGCACACTGGATCTCACACC +
Preference number: 4 (lower is better)
Translates to: ATLVQECPVSFPGYRWISSFQSF*HTGSHT
Trigger: GGTGTGAGATCCAGTGTGGCAAAAAGACTGGAAGGA...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541047.5
CDS-3UTR CCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTATCTGTGCTCCAGACATaGTATGCATCTCAGAAGTCT +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLSVLQT*YASQKS
Trigger: AGACTTCTGAGATGCATACCATGTCTGGAGCACAGA...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000540488.5
CDS-3UTR CCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCACAGGCTGTCAATCTaGGTGGCTGCCATCCGAACT +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCHRLSI*VAAIRT
Trigger: AGTTCGGATGGCAGCCACCCAGATTGACAGCCTGTG...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGCGGCATTGATGACCTaGGGACACAGGCTGTCAATC +
Preference number: 4 (lower is better)
Translates to: RQCELCAQFYENVAKDSSAALMT*GHRLSI
Trigger: GATTGACAGCCTGTGTCCCCAGGTCATCAATGCCGC...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTGCGGCATTGATGACCTaGGGACACAGGCTGTCAATC +
Preference number: 4 (lower is better)
Translates to: FPHARGIRAGRYAYKNGIAALMT*GHRLSI
Trigger: GATTGACAGCCTGTGTCCCCAGGTCATCAATGCCGC...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTTCCACATCGCCCTCTTaGAGGGCTATCACACACTTG +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFSTSPS*RAITHL
Trigger: CAAGTGTGTGATAGCCCTCCAAGAGGGCGATGTGGA...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTCACTCAGGGCTTCAATaGCAACCTCTACTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: ATLVQECPVSFPGYRWISHSGLQ*QPLLVQ
Trigger: CTGAACAAGTAGAGGTTGCCATTGAAGCCCTGAGTG...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCGTAGCGGCGACATCTaGGTGGCGGAGAAATGCTTG +
Preference number: 4 (lower is better)
Translates to: QCELCAQFYENVAKDSSVRSGDI*VAEKCL
Trigger: CAAGCATTTCTCCGCCACCCAGATGTCGCCGCTACG...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTTCGCTGAGCAGGTCCTaGAGCGCCTGCCGCACGGCG +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCSLSRS*SACRTA
Trigger: CGCCGTGCGGCAGGCGCTCCAGGACCTGCTCAGCGA...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCACACCACCGGGACTTaGATGGCTTCCCAAACTAGG +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCHTTGT*MASQTR
Trigger: CCTAGTTTGGGAAGCCATCCAAGTCCCGGTGGTGTG...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541047.5
CDS-3UTR TCA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGTCCACTCCAGAACTGTaGACACACAGGGTAGGCACC +
Preference number: 4 (lower is better)
Translates to: QCELCAQFYENVAKDSSVSTPEL*THRVGT
Trigger: GGTGCCTACCCTGTGTGTTCACAGTTCTGGAGTGGA...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000540488.5
CDS-3UTR TCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTACAGACTTTGCCTACTaGCTGGAGTGGCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: RQCELCAQFYENVAKDSSTDFAY*LEWPSP
Trigger: TGGAGAAGGCCACTCCAGTCAGTAGGCAAAGTCTGT...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000540488.5
CDS-3UTR TCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTAAAAGAGTCAGATATGTaGTCCATCACTGCTTTCCGA +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLKESDM*SITAFR
Trigger: TCGGAAAGCAGTGATGGATCACATATCTGACTCTTT...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAAGTCATCCACTGAGGTaGTGTCATCCACGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTSHPLR*CHPRPL
Trigger: CAGAGGCCGTGGATGACATCACCTCAGTGGATGACT...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTACATCCTCCAAGATGTaGTTTTCTGAGACAGAGAGG +
Preference number: 4 (lower is better)
Translates to: ATLVQECPVSFPGYRWISTSSKM*FSETER
Trigger: CCTCTCTGTCTCAGAAAATCACATCTTGGAGGATGT...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGGCGAGAGGCATCGATaGACTCATTCTCCTCAAACG +
Preference number: 4 (lower is better)
Translates to: RQCELCAQFYENVAKDSSGERHR*THSPQT
Trigger: CGTTTGAGGAGAATGAGTTCATCGATGCCTCTCGCC...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTTCAGCACAGCCTTTCTaGTGTCCCGAACGCCATCAT +
Preference number: 4 (lower is better)
Translates to: RQCELCAQFYENVAKDSSSAQPF*CPERHH
Trigger: ATGATGGCGTTCGGGACATCAGAAAGGCTGTGCTGA...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTTCAGCACAGCCTTTCTaGTGTCCCGAACGCCATCAT +
Preference number: 4 (lower is better)
Translates to: FPHARGIRAGRYAYKNGISAQPF*CPERHH
Trigger: ATGATGGCGTTCGGGACATCAGAAAGGCTGTGCTGA...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTTCAGCACAGCCTTTCTaGTGTCCCGAACGCCATCAT +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCSAQPF*CPERHH
Trigger: ATGATGGCGTTCGGGACATCAGAAAGGCTGTGCTGA...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTTCTTCTGGGGTCCTaGTCATCAGCACAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: RQCELCAQFYENVAKDSSVLLGS*SSAQPF
Trigger: GAAAGGCTGTGCTGATGATCAGGACCCCAGAAGAAC...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTGTTCTTCTGGGGTCCTaGTCATCAGCACAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCVLLGS*SSAQPF
Trigger: GAAAGGCTGTGCTGATGATCAGGACCCCAGAAGAAC...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTTGGTCATCCTCAGTCTaGACACTTGTCCTGCTACGC +
Preference number: 4 (lower is better)
Translates to: FPHARGIRAGRYAYKNGIWSSSV*TLVLLR
Trigger: GCGTAGCAGGACAAGTGTTCAGACTGAGGATGACCA...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACACCAGCCCTGACACAATaGGCTCTCCTCCCAGATTCT +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTPALTQ*ALLPDS
Trigger: AGAATCTGGGAGGAGAGCTCATTGTGTCAGGGCTGG...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343114.7
ENST00000466387.5
ENST00000496558.5
ENST00000541047.5
CDS-3UTR TCA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTCTTCTGGTATTTGGTTaGGGCCACATAGGATGCTTT +
Preference number: 4 (lower is better)
Translates to: ATLVQECPVSFPGYRWISLLVFG*GHIGCF
Trigger: AAAGCATCCTATGTGGCCTCAACCAAATACCAGAAG...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATCCAAGACACAACAGGTaGGTTGACAGCTGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNPRHNR*VDSCCP
Trigger: GGGACAGCAGCTGTCAACTCACCTGTTGTGTCTTGG...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR TCA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCAAGACACAACAGGTaGGTTGACAGCTGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: QCELCAQFYENVAKDSSVPRHNR*VDSCCP
Trigger: GGGACAGCAGCTGTCAACTCACCTGTTGTGTCTTGG...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTCTGTCCCTGACACAATaGGCTCTCCTCCCAGATTCT +
Preference number: 4 (lower is better)
Translates to: RQCELCAQFYENVAKDSSLSLTQ*ALLPDS
Trigger: AGAATCTGGGAGGAGAGCTCATTGTGTCAGGGACAG...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361291.8
ENST00000402739.9
CDS-3UTR TCA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATCTGAACTCCTGTCCCTaGCACAATGAGCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNLNSCP*HNELSS
Trigger: GGAGGAGAGCTCATTGTGTCAGGGACAGGAGTTCAG...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361291.8
ENST00000402739.9
CDS-3UTR TCA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGAGGTGGGTAGAAAGTTaGCTAGCCCTGCCCCCATCT +
Preference number: 4 (lower is better)
Translates to: QCELCAQFYENVAKDSSVRWVES*LALPPS
Trigger: AGATGGGGGCAGGGCTAGTCAACTTTCTACCCACCT...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361291.8
ENST00000402739.9
CDS-3UTR TCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTATTTCAGAATGATAGGTaGAGTTGCCGAAGTCATGCT +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLFQNDR*SCRSHA
Trigger: AGCATGACTTCGGCAACTTCACCTATCATTCTGAAA...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR TCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGCCATGTCCGCCAGGATaGGTAAGCGTGTCACCGCGG +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKPCPPG*VSVSPR
Trigger: CCGCGGTGACACGCTTACTCATCCTGGCGGACATGG...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR TCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTATCTCATCCCGACAGTaGGGATCCTTCAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: RQCELCAQFYENVAKDSSISSRQ*GSFSSC
Trigger: ACAGGAGCTGAAGGATCCTCACTGTCGGGATGAGAT...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR TCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTTGGCGGAGAAATGCTTaGGAGGCCGTGTACAGCATT +
Preference number: 4 (lower is better)
Translates to: RQCELCAQFYENVAKDSSWRRNA*EAVYSI
Trigger: AATGCTGTACACGGCCTCTCAAGCATTTCTCCGCCA...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR TCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGGGAACCTGGCCTCGCTaGACGTCATGGGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKGTWPR*TSWGPG
Trigger: TCCTGGACCCCATGACGTTCAGCGAGGCCAGGTTCC...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACATATTCATGTACTCGCTaGGCAGGTCCTGGAGCGCCT +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTYSCTR*AGPGAP
Trigger: AGGCGCTCCAGGACCTGCTCAGCGAGTACATGAATA...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR TCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTTCCTGGCAAACATGCTaGGATCCCGTCTCAAATTCC +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFSWQTC*DPVSNS
Trigger: GGAATTTGAGACGGGATCTCAGCATGTTTGCCAGGA...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466387.5
CDS-3UTR TCA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCAAGGAGGGCCCATCTaGGTCAGAGCTGGAACAATG +
Preference number: 4 (lower is better)
Translates to: QCELCAQFYENVAKDSSVQGGPI*VRAGTM
Trigger: CATTGTTCCAGCTCTGACTCAGATGGGCCCTCCTTG...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466387.5
CDS-3UTR GCA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATTATCCTGAGCAACTTTaGTCTGTGGCCGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNYPEQL*SVAGQP
Trigger: TGGCTGCCCGGCCACAGAGCAAAGTTGCTCAGGATA...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR GCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACATATCCTGAGCAACTTTaGTCTGTGGCCGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTYPEQL*SVAGQP
Trigger: TGGCTGCCCGGCCACAGAGCAAAGTTGCTCAGGATA...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTGTCAACACTCGGACCTaGTTCTCCCACTGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: FPHARGIRAGRYAYKNGIVNTRT*FSHWSL
Trigger: CAAAGACCAGTGGGAGAAGCAGGTCCGAGTGTTGAC...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTGTGTATGACTCGAGCTaGCCGGCCCCTGATGGCCCC +
Preference number: 4 (lower is better)
Translates to: VKLFNSWATHLSVLASTFVYDSS*PAPDGP
Trigger: GGGGCCATCAGGGGCCGGGCAGCTCGAGTCATACAC...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGCGCCATGATGGCCCGTaGGCTCTGCCCTGCAATGAG +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKRHDGP*ALPCNE
Trigger: CTCATTGCAGGGCAGAGCGCACGGGCCATCATGGCG...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGTCCTCCTGCGGTAGTTaGGCCATGATGGCCCGTGCG +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKSSCGS*AMMARA
Trigger: CGCACGGGCCATCATGGCGCAACTACCGCAGGAGGA...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTTCTCCTCCCAGATTCTaGACTTCTGCCTTCACCTTG +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFSPPRF*TSAFTL
Trigger: CAAGGTGAAGGCAGAAGTGCAGAATCTGGGAGGAGA...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000541047.5
CDS-3UTR GCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCCCTTAATTTCCCCATaGCAGAGGCATACGAGCTGG +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCPLISP*QRHTSW
Trigger: CCAGCTCGTATGCCTCTGGCATGGGGAAATTAAGGG...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTCCCTTAATTTCCCCATaGCAGAGGCATACGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RQCELCAQFYENVAKDSSPLISP*QRHTSW
Trigger: CCAGCTCGTATGCCTCTGGCATGGGGAAATTAAGGG...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTAGTATTGTGCTTCCAGTaGCCCCAGAAGGATTTTAAT +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLVLCFQ*PQKDFN
Trigger: ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATAC...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR GCA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTTTGGTCACCGTATTGTaGTTCCAGTGCCCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: FPHARGIRAGRYAYKNGILVTVL*FQCPQK
Trigger: CTTCTGGGGGCACTGGAAGCACAATACGGTGACCAA...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR GCA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTAGCCCCTCGGGCGGCTaGCATCTCATCCCGACAGTG +
Preference number: 4 (lower is better)
Translates to: VKLFNSWATHLSVLASTFSPSGG*HLIPTV
Trigger: CACTGTCGGGATGAGATGGCAGCCGCCCGAGGGGCT...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTCAGCCAGCTCGCCGATaGCCGTGTGGCCCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: VKLFNSWATHLSVLASTFQPARR*PCGPWL
Trigger: AAGCCAAGGGCCACACGGGCATCGGCGAGCTGGCTG...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR GCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGGTCGGCCATCAGCGCTaGGCCGCTGATGATGCTCTC +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKVGHQR*AADDAL
Trigger: GAGAGCATCATCAGCGGCGCAGCGCTGATGGCCGAC...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTAGGTCCTGGAGCGCCTaGCGCACGGCGTTGCACTCC +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCRSWSA*RTALHS
Trigger: GGAGTGCAACGCCGTGCGGCAGGCGCTCCAGGACCT...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR GCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTAGGCTGGCTGCTTAAATaGTCTGAGTCTCAATTTTCT +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLGWLLK*SESQFS
Trigger: AGAAAATTGAGACTCAGAGCATTTAAGCAGCCAGCC...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466387.5
CDS-3UTR GCA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCAGTGCTAAGGCTGTaGTGCTGGGAGTGCCATCAA +
Preference number: 4 (lower is better)
Translates to: QCELCAQFYENVAKDSSVPVLRL*CWECHQ
Trigger: TTGATGGCACTCCCAGCAGCACAGCCTTAGCACTGG...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466387.5
CDS-3UTR CCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACTAGCAAAGGAACATTaGTTTCCAGGAAAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLLAKEH*FPGKSQ
Trigger: CTGACTCTTTCCTGGAAACCAATGTTCCTTTGCTAG...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTGGCTGTCAATCTGGGTaGCTGCCATCCGAACTAATT +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFGCQSG*LPSELI
Trigger: AATTAGTTCGGATGGCAGCCACCCAGATTGACAGCC...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATCACAGGCTGTCAATCTaGGTGGCTGCCATCCGAACT +
Preference number: 4 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNHRLSI*VAAIRT
Trigger: AGTTCGGATGGCAGCCACCCAGATTGACAGCCTGTG...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGCGGCATTGATGACCTaGGGACACAGGCTGTCAATC +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTAALMT*GHRLSI
Trigger: GATTGACAGCCTGTGTCCCCAGGTCATCAATGCCGC...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATGCGGCATTGATGACCTaGGGACACAGGCTGTCAATC +
Preference number: 4 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNAALMT*GHRLSI
Trigger: GATTGACAGCCTGTGTCCCCAGGTCATCAATGCCGC...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CCA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACAGCAACTTTGCTCTGTaGCCGGGCAGCCAGTGTCAG +
Preference number: 4 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHSNFAL*PGSQCQ
Trigger: CTGACACTGGCTGCCCGGCCACAGAGCAAAGTTGCT...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CCA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTTCCACATCGCCCTCTTaGAGGGCTATCACACACTTG +
Preference number: 4 (lower is better)
Translates to: FPHARGIRAGRYAYKNGISTSPS*RAITHL
Trigger: CAAGTGTGTGATAGCCCTCCAAGAGGGCGATGTGGA...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTTCCACATCGCCCTCTTaGAGGGCTATCACACACTTG +
Preference number: 4 (lower is better)
Translates to: RQCELCAQFYENVAKDSSSTSPS*RAITHL
Trigger: CAAGTGTGTGATAGCCCTCCAAGAGGGCGATGTGGA...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTTCCACATCGCCCTCTTaGAGGGCTATCACACACTTG +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCSTSPS*RAITHL
Trigger: CAAGTGTGTGATAGCCCTCCAAGAGGGCGATGTGGA...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTTTGTTCAGCGAAGCGTaGCATCACTGTTTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: ATLVQECPVSFPGYRWISLFSEA*HHCFRK
Trigger: CTTTCTGAAACAGTGATGCCACGCTTCGCTGAACAA...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTAGACCTTCTGGTATTTaGTTGAGGCCACATAGGATG +
Preference number: 4 (lower is better)
Translates to: ATLVQECPVSFPGYRWISRPSGI*LRPHRM
Trigger: CATCCTATGTGGCCTCAACCAAATACCAGAAGGTCT...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTTCCCTCAGCACAGGTTaGGAGGTGGGTAGAAAGTTG +
Preference number: 4 (lower is better)
Translates to: RQCELCAQFYENVAKDSSSLSTG*EVGRKL
Trigger: CAACTTTCTACCCACCTCCCAACCTGTGCTGAGGGA...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361291.8
ENST00000402739.9
CDS-3UTR CCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGCCCTCTGTGGGTCGGTaGGAGTTTCTCGCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKPSVGR*EFLASS
Trigger: GGAGGAGGCGAGAAACTCCCACCGACCCACAGAGGG...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402739.9
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTCCAGGAAATTCTGAGTaGCTTGCTCTACAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFPGNSE*LALQRQ
Trigger: CTGCCTCTGTAGAGCAAGCCACTCAGAATTTCCTGG...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTCCGTGTACAGCATTGTaGCATTCTTCTTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFPCTAL*HSSSEP
Trigger: GGGCTCTGAAGAAGAATGCCACAATGCTGTACACGG...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGTCGCCGATGCCCGTGTaGCCCTTGGCTTCGTCAGTG +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKSPMPV*PLASSV
Trigger: CACTGACGAAGCCAAGGGCCACACGGGCATCGGCGA...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTCTCCTGCTGTGGCTaGGTTGCTTCTGACGTTCAT +
Preference number: 4 (lower is better)
Translates to: RQCELCAQFYENVAKDSSVSCCG*VASDVH
Trigger: ATGAACGTCAGAAGCAACCCAGCCACAGCAGGAGAC...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466387.5
CDS-3UTR CCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTCATCTGAGTCAGAGCTaGAACAATGGAGAGGGGGTA +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFHLSQS*NNGEGV
Trigger: TACCCCCTCTCCATTGTTCCAGCTCTGACTCAGATG...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466387.5
CDS-3UTR TCA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTAAAGAGTCAGATATGTaGTCCATCACTGCTTTCCGA +
Preference number: 4 (lower is better)
Translates to: ATLVQECPVSFPGYRWISKESDM*SITAFR
Trigger: TCGGAAAGCAGTGATGGATCACATATCTGACTCTTT...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTACGTCCATGTTATCCTaGGCAACTTTGCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: FPHARGIRAGRYAYKNGITSMLS*ATLLCG
Trigger: GCCACAGAGCAAAGTTGCTCAGGATAACATGGACGT...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTACGTCCATGTTATCCTaGGCAACTTTGCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: RQCELCAQFYENVAKDSSTSMLS*ATLLCG
Trigger: GCCACAGAGCAAAGTTGCTCAGGATAACATGGACGT...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTACGTCCATGTTATCCTaGGCAACTTTGCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCTSMLS*ATLLCG
Trigger: GCCACAGAGCAAAGTTGCTCAGGATAACATGGACGT...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTTCTCCCACTGGTCTTTaGAGACGTCCATGTTATCCT +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFSPTGL*RRPCYP
Trigger: AGGATAACATGGACGTCTTCAAAGACCAGTGGGAGA...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACAGTCATCCACTGAGGTaGTGTCATCCACGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHSHPLR*CHPRPL
Trigger: CAGAGGCCGTGGATGACATCACCTCAGTGGATGACT...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR TCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACATTCTCCTCAAACGGTTaGGGAACGTTGGCACTCAGG +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTFSSNG*GTLALR
Trigger: CCTGAGTGCCAACGTTCCTCAACCGTTTGAGGAGAA...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATTTCTCCTCAAACGGTTaGGGAACGTTGGCACTCAGG +
Preference number: 4 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNFSSNG*GTLALR
Trigger: CCTGAGTGCCAACGTTCCTCAACCGTTTGAGGAGAA...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR TCA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATGTTCTTCTGGGGTCCTaGTCATCAGCACAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNVLLGS*SSAQPF
Trigger: GAAAGGCTGTGCTGATGATCAGGACCCCAGAAGAAC...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR TCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACATGGTCATCCTCAGTCTaGACACTTGTCCTGCTACGC +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTWSSSV*TLVLLR
Trigger: GCGTAGCAGGACAAGTGTTCAGACTGAGGATGACCA...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTGCTTGGCCAGTACAATaGTATCATTGCCGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: FPHARGIRAGRYAYKNGIAWPVQ*YHCRCR
Trigger: ACGACAGCGGCAATGATATCATTGTACTGGCCAAGC...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTGGCCTTTGCCTCTTGTaGAGTCTGTCATTTCCATCA +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFGLCLL*SLSFPS
Trigger: TGATGGAAATGACAGACTTCACAAGAGGCAAAGGCC...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGGGCACTGTCCAGCCCTaGCACAATGAGCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKGTVQP*HNELSS
Trigger: GGAGGAGAGCTCATTGTGTCAGGGCTGGACAGTGCC...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343114.7
ENST00000466387.5
ENST00000496558.5
ENST00000541047.5
CDS-3UTR TCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTACACAACAGGTGAGTTaGCAGCTGCTGTCCCATAGA +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCTQQVS*QLLSHR
Trigger: TCTATGGGACAGCAGCTGTCAACTCACCTGTTGTGT...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTCTGTGCCCAATTTTATaGGAATGTTGCAAAGGACAG +
Preference number: 4 (lower is better)
Translates to: ATLVQECPVSFPGYRWISLCPIL*ECCKGQ
Trigger: CTGTCCTTTGCAACATTCTCATAAAATTGGGCACAG...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTTCTTCTTTGAGATCTTaGCTCTCCTTAGCGATCTGT +
Preference number: 4 (lower is better)
Translates to: ATLVQECPVSFPGYRWISSSLRS*LSLAIC
Trigger: ACAGATCGCTAAGGAGAGTCAAGATCTCAAAGAAGA...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR TCA 90 bp AATATCACGGATATAGACTTCAAGGTTAAATTGTTCAATTCATGGGCCACACACCCATGTCCGCCAGGATaGGTAAGCGTGTCACCGCGG +
Preference number: 4 (lower is better)
Translates to: NITDIDFKVKLFNSWATHPCPPG*VSVSPR
Trigger: CCGCGGTGACACGCTTACTCATCCTGGCGGACATGG...GTGTGTGGCCCATGAATTGAACAATTTAACCTTGAAGTCTATATCCGTGATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
CDS-3UTR TCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGGGATAAAAGTCTCATaGCATCTGCCATGTCCGCCA +
Preference number: 4 (lower is better)
Translates to: RQCELCAQFYENVAKDSSGIKVS*HLPCPP
Trigger: TGGCGGACATGGCAGATGTCATGAGACTTTTATCCC...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR TCA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGATCTCATCCCGACAGTaGGGATCCTTCAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: QCELCAQFYENVAKDSSVISSRQ*GSFSSC
Trigger: ACAGGAGCTGAAGGATCCTCACTGTCGGGATGAGAT...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAATCTCATCCCGACAGTaGGGATCCTTCAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTISSRQ*GSFSSC
Trigger: ACAGGAGCTGAAGGATCCTCACTGTCGGGATGAGAT...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACATGGCGGAGAAATGCTTaGGAGGCCGTGTACAGCATT +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTWRRNA*EAVYSI
Trigger: AATGCTGTACACGGCCTCTCAAGCATTTCTCCGCCA...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GAGTTAGTTAGTGAATACAATGGTATATTAGATACCAGCACTCCAAGCTACACCGTGGGCGAGGTAGCTTaGGCAGCATTGGAGATGCCG +
Preference number: 4 (lower is better)
Translates to: ELVSEYNGILDTSTPSYTVGEVA*AALEMP
Trigger: CGGCATCTCCAATGCTGCTCAAGCTACCTCGCCCAC...GGTGTAGCTTGGAGTGCTGGTATCTAATATACCATTGTATTCACTAACTAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
CDS-3UTR TCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTAGAACCCATGGTCCTTaGAGGAGTGCATCTAAATCC +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFRTHGP*RSASKS
Trigger: GGATTTAGATGCACTCCTTCAAGGACCATGGGTTCT...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466387.5
CDS-3UTR GCA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACTATCCTGAGCAACTTTaGTCTGTGGCCGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHYPEQL*SVAGQP
Trigger: TGGCTGCCCGGCCACAGAGCAAAGTTGCTCAGGATA...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR GCA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGGTCAACACTCGGACCTaGTTCTCCCACTGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: QCELCAQFYENVAKDSSVVNTRT*FSHWSL
Trigger: CAAAGACCAGTGGGAGAAGCAGGTCCGAGTGTTGAC...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTATCTGAACACTTGTCCTaGTACGCACATCATAATCTT +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLSEHLS*YAHHNL
Trigger: AAGATTATGATGTGCGTAGCAGGACAAGTGTTCAGA...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGCCGTGCGCTCTGCCCTaGAATGAGCTGGTCATCCTC +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKPCALP*NELVIL
Trigger: GAGGATGACCAGCTCATTGCAGGGCAGAGCGCACGG...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GAGTTAGTTAGTGAATACAATGGTATATTAGATACCAGCACTCCAAGCTACACCATGGCCCGTGCGCTCTaGCCTGCAATGAGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: ELVSEYNGILDTSTPSYTMARAL*PAMSWS
Trigger: TGACCAGCTCATTGCAGGGCAGAGCGCACGGGCCAT...GGTGTAGCTTGGAGTGCTGGTATCTAATATACCATTGTATTCACTAACTAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR GCA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGTTTGCCTTCTCCTCCTaGGGTAGTTGCGCCATGATG +
Preference number: 4 (lower is better)
Translates to: QCELCAQFYENVAKDSSVFAFSS*GSCAMM
Trigger: CATCATGGCGCAACTACCGCAGGAGGAGAAGGCAAA...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACATTTGCCTTCTCCTCCTaGGGTAGTTGCGCCATGATG +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTFAFSS*GSCAMM
Trigger: CATCATGGCGCAACTACCGCAGGAGGAGAAGGCAAA...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTTCTCCTCCCAGATTCTaGACTTCTGCCTTCACCTTG +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCSPPRF*TSAFTL
Trigger: CAAGGTGAAGGCAGAAGTGCAGAATCTGGGAGGAGA...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000541047.5
CDS-3UTR GCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTTCTCCTCCCAGATTCTaGACTTCTGCCTTCACCTTG +
Preference number: 4 (lower is better)
Translates to: RQCELCAQFYENVAKDSSSPPRF*TSAFTL
Trigger: CAAGGTGAAGGCAGAAGTGCAGAATCTGGGAGGAGA...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000541047.5
CDS-3UTR GCA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTTCTCCTCCCAGATTCTaGACTTCTGCCTTCACCTTG +
Preference number: 4 (lower is better)
Translates to: FPHARGIRAGRYAYKNGISPPRF*TSAFTL
Trigger: CAAGGTGAAGGCAGAAGTGCAGAATCTGGGAGGAGA...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000541047.5
CDS-3UTR GCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACACCCTTAATTTCCCCATaGCAGAGGCATACGAGCTGG +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTPLISP*QRHTSW
Trigger: CCAGCTCGTATGCCTCTGGCATGGGGAAATTAAGGG...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTCAAAGGACAGCTCTGTaGCACCTTAGTACAGGAATG +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFQRTAL*HLSTGM
Trigger: CATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTG...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGTTGGTCACCGTATTGTaGTTCCAGTGCCCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: QCELCAQFYENVAKDSSVLVTVL*FQCPQK
Trigger: CTTCTGGGGGCACTGGAAGCACAATACGGTGACCAA...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR GCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTTCGTCTCACCTTGTTTaGGCACATCCTCTACAGCAG +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCSSHLV*AHPLQQ
Trigger: CTGCTGTAGAGGATGTGCGCAAACAAGGTGAGACGA...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTGGAGAGCAAAGCCCTTaGCGCCCGTACCATGGTGCC +
Preference number: 4 (lower is better)
Translates to: VKLFNSWATHLSVLASTFGEQSP*RPYHGA
Trigger: GGCACCATGGTACGGGCGGCAAGGGCTTTGCTCTCC...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTAGCCCCTCGGGCGGCTaGCATCTCATCCCGACAGTG +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCSPSGG*HLIPTV
Trigger: CACTGTCGGGATGAGATGGCAGCCGCCCGAGGGGCT...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTCAGCCAGCTCGCCGATaGCCGTGTGGCCCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCQPARR*PCGPWL
Trigger: AAGCCAAGGGCCACACGGGCATCGGCGAGCTGGCTG...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAAAAGGGCTGGCTGACTaGAGAATTCCAGTACCCGCA +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTKGLAD*RIPVPA
Trigger: TGCGGGTACTGGAATTCTGCAGTCAGCCAGCCCTTT...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541047.5
CDS-3UTR CCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTACTTTGCCTACTGACTaGAGTGGCCTTCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCTLPTD*SGLLHP
Trigger: TGGATGGAGAAGGCCACTCCAGTCAGTAGGCAAAGT...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000540488.5
CDS-3UTR CCA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTGGCTGTCAATCTGGGTaGCTGCCATCCGAACTAATT +
Preference number: 4 (lower is better)
Translates to: FPHARGIRAGRYAYKNGIGCQSG*LPSELI
Trigger: AATTAGTTCGGATGGCAGCCACCCAGATTGACAGCC...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTACCTGCTTCTCCCACTaGTCTTTGAAGACGTCCATG +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCTCFSH*SLKTSM
Trigger: CATGGACGTCTTCAAAGACCAGTGGGAGAAGCAGGT...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTACCTGCTTCTCCCACTaGTCTTTGAAGACGTCCATG +
Preference number: 4 (lower is better)
Translates to: RQCELCAQFYENVAKDSSTCFSH*SLKTSM
Trigger: CATGGACGTCTTCAAAGACCAGTGGGAGAAGCAGGT...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATACGGTTGAGGAACGTTaGCACTCAGGGCTTCAATGG +
Preference number: 4 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNTVEER*HSGLQW
Trigger: CCATTGAAGCCCTGAGTGCCAACGTTCCTCAACCGT...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAACGGTTGAGGAACGTTaGCACTCAGGGCTTCAATGG +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTTVEER*HSGLQW
Trigger: CCATTGAAGCCCTGAGTGCCAACGTTCCTCAACCGT...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACATGGCACTGTCCAGCATaGAGGAATCACTGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTWHCPA*RNHCFH
Trigger: GTGGAAGCAGTGATTCCTCCATGCTGGACAGTGCCA...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361291.8
ENST00000402739.9
CDS-3UTR CCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTGAGGCAGCTAGTACATaGGCTTTCTTTGACCTCCCT +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCEAAST*AFFDLP
Trigger: AGGGAGGTCAAAGAAAGCCCATGTACTAGCTGCCTC...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CCA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTTTGCCGCCCGTACCATaGTGCCGCGCTTTACCGACG +
Preference number: 4 (lower is better)
Translates to: VKLFNSWATHLSVLASTFLPPVP*CRALPT
Trigger: CGTCGGTAAAGCGCGGCACCATGGTACGGGCGGCAA...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTTGCCCGTGTGGCCCTTaGCTTCGTCAGTGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCCPCGP*LRQWAR
Trigger: CCTCGCCCACTGACGAAGCCAAGGGCCACACGGGCA...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CCA 90 bp AATATCACGGATATAGACTTCAAGGTTAAATTGTTCAATTCATGGGCCACACACTCGCCGATGCCCGTGTaGCCCTTGGCTTCGTCAGTG +
Preference number: 4 (lower is better)
Translates to: NITDIDFKVKLFNSWATHSPMPV*PLASSV
Trigger: CACTGACGAAGCCAAGGGCCACACGGGCATCGGCGA...GTGTGTGGCCCATGAATTGAACAATTTAACCTTGAAGTCTATATCCGTGATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
CDS-3UTR TCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTATATCAATCGCAATGTTaGGAGGATCTCCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLYQSQC*EDLLFL
Trigger: AAGAAAAAGGAGATCCTCTCAACATTGCGATTGATA...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTTCTCCCACTGGTCTTTaGAGACGTCCATGTTATCCT +
Preference number: 4 (lower is better)
Translates to: RQCELCAQFYENVAKDSSSPTGL*RRPCYP
Trigger: AGGATAACATGGACGTCTTCAAAGACCAGTGGGAGA...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTTCTCCCACTGGTCTTTaGAGACGTCCATGTTATCCT +
Preference number: 4 (lower is better)
Translates to: FPHARGIRAGRYAYKNGISPTGL*RRPCYP
Trigger: AGGATAACATGGACGTCTTCAAAGACCAGTGGGAGA...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTACATCCTCCAAGATGTaGTTTTCTGAGACAGAGAGG +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFTSSKM*FSETER
Trigger: CCTCTCTGTCTCAGAAAATCACATCTTGGAGGATGT...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACGTTCTTCTGGGGTCCTaGTCATCAGCACAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHVLLGS*SSAQPF
Trigger: GAAAGGCTGTGCTGATGATCAGGACCCCAGAAGAAC...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR TCA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACTGGTCATCCTCAGTCTaGACACTTGTCCTGCTACGC +
Preference number: 4 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHWSSSV*TLVLLR
Trigger: GCGTAGCAGGACAAGTGTTCAGACTGAGGATGACCA...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR TCA 90 bp GAGTTAGTTAGTGAATACAATGGTATATTAGATACCAGCACTCCAAGCTACACCCGCTCTGCCCTGCAATaGGCTGGTCATCCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: ELVSEYNGILDTSTPSYTRSALQ*AGHPQS
Trigger: AGACTGAGGATGACCAGCTCATTGCAGGGCAGAGCG...GGTGTAGCTTGGAGTGCTGGTATCTAATATACCATTGTATTCACTAACTAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR TCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGCGCTCTGCCCTGCAATaGGCTGGTCATCCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKRSALQ*AGHPQS
Trigger: AGACTGAGGATGACCAGCTCATTGCAGGGCAGAGCG...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGGCTTGGCCAGTACAATaGTATCATTGCCGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: QCELCAQFYENVAKDSSVAWPVQ*YHCRCR
Trigger: ACGACAGCGGCAATGATATCATTGTACTGGCCAAGC...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGGCCTTTGCCTCTTGTaGAGTCTGTCATTTCCATCA +
Preference number: 4 (lower is better)
Translates to: RQCELCAQFYENVAKDSSGLCLL*SLSFPS
Trigger: TGATGGAAATGACAGACTTCACAAGAGGCAAAGGCC...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTGGCCTTTGCCTCTTGTaGAGTCTGTCATTTCCATCA +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCGLCLL*SLSFPS
Trigger: TGATGGAAATGACAGACTTCACAAGAGGCAAAGGCC...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTATCCTGCTTACATGCTaGATCAGGACACTGATCAGC +
Preference number: 4 (lower is better)
Translates to: RQCELCAQFYENVAKDSSILLTC*IRTLIS
Trigger: GCTGATCAGTGTCCTGATTCAGCATGTAAGCAGGAT...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000541047.5
CDS-3UTR TCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTATCCTGCTTACATGCTaGATCAGGACACTGATCAGC +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCILLTC*IRTLIS
Trigger: GCTGATCAGTGTCCTGATTCAGCATGTAAGCAGGAT...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000541047.5
CDS-3UTR TCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTCTTCTGGTATTTGGTTaGGGCCACATAGGATGCTTT +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFLLVFG*GHIGCF
Trigger: AAAGCATCCTATGTGGCCTCAACCAAATACCAGAAG...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGACACAACAGGTGAGTTaGCAGCTGCTGTCCCATAGA +
Preference number: 4 (lower is better)
Translates to: QCELCAQFYENVAKDSSVTQQVS*QLLSHR
Trigger: TCTATGGGACAGCAGCTGTCAACTCACCTGTTGTGT...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATACACAACAGGTGAGTTaGCAGCTGCTGTCCCATAGA +
Preference number: 4 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNTQQVS*QLLSHR
Trigger: TCTATGGGACAGCAGCTGTCAACTCACCTGTTGTGT...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR TCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTGAAATGTGTTTCTTCTaGGAACCTCGTCGAACTCGT +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFEMCFF*EPRRTR
Trigger: ACGAGTTCGACGAGGTTCTCAGAAGAAACACATTTC...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTAAGGAATCCATTGCTTTaGATTCACTTAAAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLRNPLL*IHLKPV
Trigger: TACAGGCTTTAAGTGAATTCAAAGCAATGGATTCCT...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGTAGTGAAAGTGCTCTaGACTCCTGTCCCTGACACA +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTVVKVL*TPVPDT
Trigger: TGTGTCAGGGACAGGAGTTCAGAGCACTTTCACTAC...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361291.8
ENST00000402739.9
CDS-3UTR TCA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGGGGATAAAAGTCTCATaGCATCTGCCATGTCCGCCA +
Preference number: 4 (lower is better)
Translates to: QCELCAQFYENVAKDSSVGIKVS*HLPCPP
Trigger: TGGCGGACATGGCAGATGTCATGAGACTTTTATCCC...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR GCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTTATGTGATCCATCACTaGTTTCCGAAGCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFYVIHH*FPKLSP
Trigger: AGGAGACAGCTTCGGAAAGCAGTGATGGATCACATA...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTTCTGAACACTTGTCCTaGTACGCACATCATAATCTT +
Preference number: 4 (lower is better)
Translates to: ATLVQECPVSFPGYRWISSEHLS*YAHHNL
Trigger: AAGATTATGATGTGCGTAGCAGGACAAGTGTTCAGA...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTCCGTGCGCTCTGCCCTaGAATGAGCTGGTCATCCTC +
Preference number: 4 (lower is better)
Translates to: VKLFNSWATHLSVLASTFPCALP*NELVIL
Trigger: GAGGATGACCAGCTCATTGCAGGGCAGAGCGCACGG...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp AATATCACGGATATAGACTTCAAGGTTAAATTGTTCAATTCATGGGCCACACACCCGTGCGCTCTGCCCTaGAATGAGCTGGTCATCCTC +
Preference number: 4 (lower is better)
Translates to: NITDIDFKVKLFNSWATHPCALP*NELVIL
Trigger: GAGGATGACCAGCTCATTGCAGGGCAGAGCGCACGG...GTGTGTGGCCCATGAATTGAACAATTTAACCTTGAAGTCTATATCCGTGATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR GCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTTCCTCCTGCGGTAGTTaGGCCATGATGGCCCGTGCG +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCSSCGS*AMMARA
Trigger: CGCACGGGCCATCATGGCGCAACTACCGCAGGAGGA...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTGTCCATTCGAGAACCTaGTTCGGCAATTTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCVHSRT*FGNFLG
Trigger: GCCAAGAAAATTGCCGAAGCAGGTTCTCGAATGGAC...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACATCTCCTCCCAGATTCTaGACTTCTGCCTTCACCTTG +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTSPPRF*TSAFTL
Trigger: CAAGGTGAAGGCAGAAGTGCAGAATCTGGGAGGAGA...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000541047.5
CDS-3UTR GCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTCATCAGGTTTTTAGCTaGCTGGATAAGCGATGTGGC +
Preference number: 4 (lower is better)
Translates to: RQCELCAQFYENVAKDSSHQVFS*LDKRCG
Trigger: GCCACATCGCTTATCCAGGCAGCTAAAAACCTGATG...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTCATCAGGTTTTTAGCTaGCTGGATAAGCGATGTGGC +
Preference number: 4 (lower is better)
Translates to: FPHARGIRAGRYAYKNGIHQVFS*LDKRCG
Trigger: GCCACATCGCTTATCCAGGCAGCTAAAAACCTGATG...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTGGAGAGCAAAGCCCTTaGCGCCCGTACCATGGTGCC +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCGEQSP*RPYHGA
Trigger: GGCACCATGGTACGGGCGGCAAGGGCTTTGCTCTCC...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAAAGTCTCATGACATCTaGCATGTCCGCCAGGATGAG +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTKSHDI*HVRQDE
Trigger: CTCATCCTGGCGGACATGGCAGATGTCATGAGACTT...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR GCA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACTCTTTAAAACGGTTTaGAAGGTCTTGCTCATTTGT +
Preference number: 4 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLLFKTV*KVLLIC
Trigger: ACAAATGAGCAAGACCTTGCAAACCGTTTTAAAGAG...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTGAGCAGCATTGGAGATaGCGGCGATGGCCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: VKLFNSWATHLSVLASTFEQHWR*RRWPPG
Trigger: TCCAGGAGGCCATCGCCGGCATCTCCAATGCTGCTC...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTGTCGGCCATCAGCGCTaGGCCGCTGATGATGCTCTC +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCVGHQR*AADDAL
Trigger: GAGAGCATCATCAGCGGCGCAGCGCTGATGGCCGAC...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAACTTTGCCTACTGACTaGAGTGGCCTTCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTTLPTD*SGLLHP
Trigger: TGGATGGAGAAGGCCACTCCAGTCAGTAGGCAAAGT...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000540488.5
CDS-3UTR CCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGCTGTCAATCTGGGTaGCTGCCATCCGAACTAATT +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTGCQSG*LPSELI
Trigger: AATTAGTTCGGATGGCAGCCACCCAGATTGACAGCC...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGAGCAACTTTGCTCTGTaGCCGGGCAGCCAGTGTCAG +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKSNFAL*PGSQCQ
Trigger: CTGACACTGGCTGCCCGGCCACAGAGCAAAGTTGCT...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACTCCACATCGCCCTCTTaGAGGGCTATCACACACTTG +
Preference number: 4 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHSTSPS*RAITHL
Trigger: CAAGTGTGTGATAGCCCTCCAAGAGGGCGATGTGGA...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTCACTCAGGGCTTCAATaGCAACCTCTACTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: RQCELCAQFYENVAKDSSHSGLQ*QPLLVQ
Trigger: CTGAACAAGTAGAGGTTGCCATTGAAGCCCTGAGTG...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCACTCAGGGCTTCAATaGCAACCTCTACTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCHSGLQ*QPLLVQ
Trigger: CTGAACAAGTAGAGGTTGCCATTGAAGCCCTGAGTG...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTAGGTTTTTAGCTGCCTaGATAAGCGATGTGGCACTG +
Preference number: 4 (lower is better)
Translates to: RQCELCAQFYENVAKDSSRFLAA*ISDVAL
Trigger: CAGTGCCACATCGCTTATCCAGGCAGCTAAAAACCT...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTAGGTTTTTAGCTGCCTaGATAAGCGATGTGGCACTG +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCRFLAA*ISDVAL
Trigger: CAGTGCCACATCGCTTATCCAGGCAGCTAAAAACCT...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTCGTCGAACTCGTGTCTaGAATTCTTCAGGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFRRTRV*NSSGFS
Trigger: AGAAAAGCCTGAAGAATTCCAGACACGAGTTCGACG...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTCAGAGGCATACGAGCTaGCAGGTATGCATACAAAAA +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFQRHTS*QVCIQK
Trigger: TTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTG...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATGAGGCAGCTAGTACATaGGCTTTCTTTGACCTCCCT +
Preference number: 4 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNEAAST*AFFDLP
Trigger: AGGGAGGTCAAAGAAAGCCCATGTACTAGCTGCCTC...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
CDS-3UTR CCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACACCAGGAAATTCTGAGTaGCTTGCTCTACAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTPGNSE*LALQRQ
Trigger: CTGCCTCTGTAGAGCAAGCCACTCAGAATTTCCTGG...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CCA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGTCTGTGACTCCAGGCTaGCTGCTTAAATGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: QCELCAQFYENVAKDSSVSVTPG*LLKCSE
Trigger: CTCAGAGCATTTAAGCAGCCAGCCTGGAGTCACAGA...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466387.5
CDS-3UTR CCA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACGTCTTTTTGCCACACTaGATCTCACACCACCGGGAC +
Preference number: 4 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHVFLPH*ISHHRD
Trigger: GTCCCGGTGGTGTGAGATCCAGTGTGGCAAAAAGAC...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541047.5
3UTR CAA 72 bp GCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTaGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGA +
Preference number: 4 (lower is better)
Translates to: ANANSVPNFMRM*QRTALCHLSTG
Trigger: TCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTTCTTTGCAGCCTCAATaGGAACTAGCAAAGGAACAT +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFSLQPQ*ELAKEH
Trigger: ATGTTCCTTTGCTAGTTCTCATTGAGGCTGCAAAGA...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGAGTCATCCACTGAGGTaGTGTCATCCACGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKSHPLR*CHPRPL
Trigger: CAGAGGCCGTGGATGACATCACCTCAGTGGATGACT...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTACATCCTCCAAGATGTaGTTTTCTGAGACAGAGAGG +
Preference number: 4 (lower is better)
Translates to: FPHARGIRAGRYAYKNGITSSKM*FSETER
Trigger: CCTCTCTGTCTCAGAAAATCACATCTTGGAGGATGT...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTACATCCTCCAAGATGTaGTTTTCTGAGACAGAGAGG +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCTSSKM*FSETER
Trigger: CCTCTCTGTCTCAGAAAATCACATCTTGGAGGATGT...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTCGCTCTGCCCTGCAATaGGCTGGTCATCCTCAGTCT +
Preference number: 4 (lower is better)
Translates to: VKLFNSWATHLSVLASTFRSALQ*AGHPQS
Trigger: AGACTGAGGATGACCAGCTCATTGCAGGGCAGAGCG...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACGCTTGGCCAGTACAATaGTATCATTGCCGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHAWPVQ*YHCRCR
Trigger: ACGACAGCGGCAATGATATCATTGTACTGGCCAAGC...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR TCA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATGGCCTTTGCCTCTTGTaGAGTCTGTCATTTCCATCA +
Preference number: 4 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNGLCLL*SLSFPS
Trigger: TGATGGAAATGACAGACTTCACAAGAGGCAAAGGCC...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR TCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGCCTTTGCCTCTTGTaGAGTCTGTCATTTCCATCA +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTGLCLL*SLSFPS
Trigger: TGATGGAAATGACAGACTTCACAAGAGGCAAAGGCC...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTGGCACTGTCCAGCCCTaGCACAATGAGCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCGTVQP*HNELSS
Trigger: GGAGGAGAGCTCATTGTGTCAGGGCTGGACAGTGCC...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343114.7
ENST00000466387.5
ENST00000496558.5
ENST00000541047.5
CDS-3UTR TCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGCCAAGACACAACAGGTaGGTTGACAGCTGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKPRHNR*VDSCCP
Trigger: GGGACAGCAGCTGTCAACTCACCTGTTGTGTCTTGG...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTGAAATGTGTTTCTTCTaGGAACCTCGTCGAACTCGT +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCEMCFF*EPRRTR
Trigger: ACGAGTTCGACGAGGTTCTCAGAAGAAACACATTTC...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTGAAATGTGTTTCTTCTaGGAACCTCGTCGAACTCGT +
Preference number: 4 (lower is better)
Translates to: FPHARGIRAGRYAYKNGIEMCFF*EPRRTR
Trigger: ACGAGTTCGACGAGGTTCTCAGAAGAAACACATTTC...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTCTGTGCCCAATTTTATaGGAATGTTGCAAAGGACAG +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFLCPIL*ECCKGQ
Trigger: CTGTCCTTTGCAACATTCTCATAAAATTGGGCACAG...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGCTGAACTCCTGTCCCTaGCACAATGAGCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKLNSCP*HNELSS
Trigger: GGAGGAGAGCTCATTGTGTCAGGGACAGGAGTTCAG...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361291.8
ENST00000402739.9
CDS-3UTR TCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTTTTCAGAATGATAGGTaGAGTTGCCGAAGTCATGCT +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFFQNDR*SCRSHA
Trigger: AGCATGACTTCGGCAACTTCACCTATCATTCTGAAA...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR TCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTTCTTCTTTGAGATCTTaGCTCTCCTTAGCGATCTGT +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFSSLRS*LSLAIC
Trigger: ACAGATCGCTAAGGAGAGTCAAGATCTCAAAGAAGA...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR TCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGTATTCATGTACTCGCTaGGCAGGTCCTGGAGCGCCT +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKYSCTR*AGPGAP
Trigger: AGGCGCTCCAGGACCTGCTCAGCGAGTACATGAATA...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR TCA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGAGACTTAAATCTCTGTaGCTCCAGGCTGGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: QCELCAQFYENVAKDSSVRLKSL*LQAGCL
Trigger: TAAGCAGCCAGCCTGGAGTCACAGAGATTTAAGTCT...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466387.5
CDS-3UTR TCA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACCCTGAGTGCTGGCTCTaGGACTTAAATCTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHPECWL*DLNLCD
Trigger: GTCACAGAGATTTAAGTCTCAGAGCCAGCACTCAGG...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466387.5
CDS-3UTR GCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTGCTCCAGACATGGTATaGATCTCAGAAGTCTTCATA +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFAPDMV*ISEVFI
Trigger: TATGAAGACTTCTGAGATGCATACCATGTCTGGAGC...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000540488.5
CDS-3UTR GCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTATGGCCCGTGCGCTCTaGCCTGCAATGAGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCMARAL*PAMSWS
Trigger: TGACCAGCTCATTGCAGGGCAGAGCGCACGGGCCAT...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGGTCCATTCGAGAACCTaGTTCGGCAATTTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: QCELCAQFYENVAKDSSVVHSRT*FGNFLG
Trigger: GCCAAGAAAATTGCCGAAGCAGGTTCTCGAATGGAC...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACACAAAGGACAGCTCTGTaGCACCTTAGTACAGGAATG +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTQRTAL*HLSTGM
Trigger: CATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTG...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCAAAGGACAGCTCTGTaGCACCTTAGTACAGGAATG +
Preference number: 4 (lower is better)
Translates to: QCELCAQFYENVAKDSSVQRTAL*HLSTGM
Trigger: CATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTG...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCACTCCCATAAATATTaGGCCAATGCGAACTCTGTG +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCHSHKY*ANANSV
Trigger: CACAGAGTTCGCATTGGCGCAATATTTATGGGAGTG...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTGTATTGTGCTTCCAGTaGCCCCAGAAGGATTTTAAT +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFVLCFQ*PQKDFN
Trigger: ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATAC...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR GCA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTCTGTTGTCTTCTTGCTaGTACATAGTTAAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: ATLVQECPVSFPGYRWISLLSSC*YIVKFH
Trigger: GTGAAACTTAACTATGTAGCAGCAAGAAGACAACAG...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GAGTTAGTTAGTGAATACAATGGTATATTAGATACCAGCACTCCAAGCTACACCTGGGTGGCGGAGAAATaGTTGAGAGGCCGTGTACAG +
Preference number: 4 (lower is better)
Translates to: ELVSEYNGILDTSTPSYTWVAEK*LRGRVQ
Trigger: CTGTACACGGCCTCTCAAGCATTTCTCCGCCACCCA...GGTGTAGCTTGGAGTGCTGGTATCTAATATACCATTGTATTCACTAACTAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
CDS-3UTR GCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGTGGGTGGCGGAGAAATaGTTGAGAGGCCGTGTACAG +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKWVAEK*LRGRVQ
Trigger: CTGTACACGGCCTCTCAAGCATTTCTCCGCCACCCA...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CCA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACGGCTGTCAATCTGGGTaGCTGCCATCCGAACTAATT +
Preference number: 4 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHGCQSG*LPSELI
Trigger: AATTAGTTCGGATGGCAGCCACCCAGATTGACAGCC...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CCA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTAGCAACTTTGCTCTGTaGCCGGGCAGCCAGTGTCAG +
Preference number: 4 (lower is better)
Translates to: VKLFNSWATHLSVLASTFSNFAL*PGSQCQ
Trigger: CTGACACTGGCTGCCCGGCCACAGAGCAAAGTTGCT...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTTTGTTCAGCGAAGCGTaGCATCACTGTTTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: FPHARGIRAGRYAYKNGILFSEA*HHCFRK
Trigger: CTTTCTGAAACAGTGATGCCACGCTTCGCTGAACAA...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTTTGTTCAGCGAAGCGTaGCATCACTGTTTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: RQCELCAQFYENVAKDSSLFSEA*HHCFRK
Trigger: CTTTCTGAAACAGTGATGCCACGCTTCGCTGAACAA...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCACTCAGGGCTTCAATaGCAACCTCTACTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: QCELCAQFYENVAKDSSVHSGLQ*QPLLVQ
Trigger: CTGAACAAGTAGAGGTTGCCATTGAAGCCCTGAGTG...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAAGGTTTTTAGCTGCCTaGATAAGCGATGTGGCACTG +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTRFLAA*ISDVAL
Trigger: CAGTGCCACATCGCTTATCCAGGCAGCTAAAAACCT...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTAGACCTTCTGGTATTTaGTTGAGGCCACATAGGATG +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCRPSGI*LRPHRM
Trigger: CATCCTATGTGGCCTCAACCAAATACCAGAAGGTCT...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTAGACCTTCTGGTATTTaGTTGAGGCCACATAGGATG +
Preference number: 4 (lower is better)
Translates to: RQCELCAQFYENVAKDSSRPSGI*LRPHRM
Trigger: CATCCTATGTGGCCTCAACCAAATACCAGAAGGTCT...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTCGTCGAACTCGTGTCTaGAATTCTTCAGGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: FPHARGIRAGRYAYKNGIRRTRV*NSSGFS
Trigger: AGAAAAGCCTGAAGAATTCCAGACACGAGTTCGACG...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTCAGAGGCATACGAGCTaGCAGGTATGCATACAAAAA +
Preference number: 4 (lower is better)
Translates to: RQCELCAQFYENVAKDSSQRHTS*QVCIQK
Trigger: TTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTG...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTTTCCCAGGCTACAGATaGATCAGTAGTATTGATCTC +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFFPGYR*ISSIDL
Trigger: GAGATCAATACTACTGATCCATCTGTAGCCTGGGAA...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACGAGGCAGCTAGTACATaGGCTTTCTTTGACCTCCCT +
Preference number: 4 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHEAAST*AFFDLP
Trigger: AGGGAGGTCAAAGAAAGCCCATGTACTAGCTGCCTC...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
CDS-3UTR CCA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACCCGTGTACAGCATTGTaGCATTCTTCTTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHPCTAL*HSSSEP
Trigger: GGGCTCTGAAGAAGAATGCCACAATGCTGTACACGG...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
CDS-3UTR CCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTCAAGATTTCCCGAGGTaGAAAGAAGACCTTCATTCA +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFQDFPR*KEDLHS
Trigger: TGAATGAAGGTCTTCTTTCCACCTCGGGAAATCTTG...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466387.5
CDS-3UTR TCA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTAAAGAGTCAGATATGTaGTCCATCACTGCTTTCCGA +
Preference number: 4 (lower is better)
Translates to: FPHARGIRAGRYAYKNGIKESDM*SITAFR
Trigger: TCGGAAAGCAGTGATGGATCACATATCTGACTCTTT...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTTCTTTGCAGCCTCAATaGGAACTAGCAAAGGAACAT +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCSLQPQ*ELAKEH
Trigger: ATGTTCCTTTGCTAGTTCTCATTGAGGCTGCAAAGA...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTAGTCATCCACTGAGGTaGTGTCATCCACGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: VKLFNSWATHLSVLASTFSHPLR*CHPRPL
Trigger: CAGAGGCCGTGGATGACATCACCTCAGTGGATGACT...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp AATATCACGGATATAGACTTCAAGGTTAAATTGTTCAATTCATGGGCCACACACAGTCATCCACTGAGGTaGTGTCATCCACGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: NITDIDFKVKLFNSWATHSHPLR*CHPRPL
Trigger: CAGAGGCCGTGGATGACATCACCTCAGTGGATGACT...GTGTGTGGCCCATGAATTGAACAATTTAACCTTGAAGTCTATATCCGTGATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR TCA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGACATCCTCCAAGATGTaGTTTTCTGAGACAGAGAGG +
Preference number: 4 (lower is better)
Translates to: QCELCAQFYENVAKDSSVTSSKM*FSETER
Trigger: CCTCTCTGTCTCAGAAAATCACATCTTGGAGGATGT...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GAGTTAGTTAGTGAATACAATGGTATATTAGATACCAGCACTCCAAGCTACACCTTCTCCTCAAACGGTTaGGGAACGTTGGCACTCAGG +
Preference number: 4 (lower is better)
Translates to: ELVSEYNGILDTSTPSYTFSSNG*GTLALR
Trigger: CCTGAGTGCCAACGTTCCTCAACCGTTTGAGGAGAA...GGTGTAGCTTGGAGTGCTGGTATCTAATATACCATTGTATTCACTAACTAACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR TCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGTTCTCCTCAAACGGTTaGGGAACGTTGGCACTCAGG +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKFSSNG*GTLALR
Trigger: CCTGAGTGCCAACGTTCCTCAACCGTTTGAGGAGAA...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGTCAGCACAGCCTTTCTaGTGTCCCGAACGCCATCAT +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKSAQPF*CPERHH
Trigger: ATGATGGCGTTCGGGACATCAGAAAGGCTGTGCTGA...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GAGTTAGTTAGTGAATACAATGGTATATTAGATACCAGCACTCCAAGCTACACCTGGTCATCCTCAGTCTaGACACTTGTCCTGCTACGC +
Preference number: 4 (lower is better)
Translates to: ELVSEYNGILDTSTPSYTWSSSV*TLVLLR
Trigger: GCGTAGCAGGACAAGTGTTCAGACTGAGGATGACCA...GGTGTAGCTTGGAGTGCTGGTATCTAATATACCATTGTATTCACTAACTAACTC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR TCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTCTGCAGATATTAAGCTaGTGGCAATACAAGGCAATT +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFLQILS*WQYKAI
Trigger: AATTGCCTTGTATTGCCATCAGCTTAATATCTGCAG...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000541047.5
CDS-3UTR TCA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGGAAATGTGTTTCTTCTaGGAACCTCGTCGAACTCGT +
Preference number: 4 (lower is better)
Translates to: QCELCAQFYENVAKDSSVEMCFF*EPRRTR
Trigger: ACGAGTTCGACGAGGTTCTCAGAAGAAACACATTTC...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTCTGTGCCCAATTTTATaGGAATGTTGCAAAGGACAG +
Preference number: 4 (lower is better)
Translates to: FPHARGIRAGRYAYKNGILCPIL*ECCKGQ
Trigger: CTGTCCTTTGCAACATTCTCATAAAATTGGGCACAG...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GAGTTAGTTAGTGAATACAATGGTATATTAGATACCAGCACTCCAAGCTACACCCTGTCCCTGACACAATaGGCTCTCCTCCCAGATTCT +
Preference number: 4 (lower is better)
Translates to: ELVSEYNGILDTSTPSYTLSLTQ*ALLPDS
Trigger: AGAATCTGGGAGGAGAGCTCATTGTGTCAGGGACAG...GGTGTAGCTTGGAGTGCTGGTATCTAATATACCATTGTATTCACTAACTAACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361291.8
ENST00000402739.9
CDS-3UTR TCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTTCTTCTTTGAGATCTTaGCTCTCCTTAGCGATCTGT +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCSSLRS*LSLAIC
Trigger: ACAGATCGCTAAGGAGAGTCAAGATCTCAAAGAAGA...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTTATTCATGTACTCGCTaGGCAGGTCCTGGAGCGCCT +
Preference number: 4 (lower is better)
Translates to: VKLFNSWATHLSVLASTFYSCTR*AGPGAP
Trigger: AGGCGCTCCAGGACCTGCTCAGCGAGTACATGAATA...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACATATGTGATCCATCACTaGTTTCCGAAGCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTYVIHH*FPKLSP
Trigger: AGGAGACAGCTTCGGAAAGCAGTGATGGATCACATA...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTTATCCTGAGCAACTTTaGTCTGTGGCCGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: VKLFNSWATHLSVLASTFYPEQL*SVAGQP
Trigger: TGGCTGCCCGGCCACAGAGCAAAGTTGCTCAGGATA...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGGTCAACACTCGGACCTaGTTCTCCCACTGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKVNTRT*FSHWSL
Trigger: CAAAGACCAGTGGGAGAAGCAGGTCCGAGTGTTGAC...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTTGGAATATCTCCACCTaGTCAGCTATTTTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: RQCELCAQFYENVAKDSSWNIST*SAIFAF
Trigger: GAAGGCAAAAATAGCTGAGCAGGTGGAGATATTCCA...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTTGGAATATCTCCACCTaGTCAGCTATTTTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCWNIST*SAIFAF
Trigger: GAAGGCAAAAATAGCTGAGCAGGTGGAGATATTCCA...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTTGGAATATCTCCACCTaGTCAGCTATTTTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: FPHARGIRAGRYAYKNGIWNIST*SAIFAF
Trigger: GAAGGCAAAAATAGCTGAGCAGGTGGAGATATTCCA...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACGTCCATTCGAGAACCTaGTTCGGCAATTTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHVHSRT*FGNFLG
Trigger: GCCAAGAAAATTGCCGAAGCAGGTTCTCGAATGGAC...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR GCA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACCATCAGGTTTTTAGCTaGCTGGATAAGCGATGTGGC +
Preference number: 4 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHHQVFS*LDKRCG
Trigger: GCCACATCGCTTATCCAGGCAGCTAAAAACCTGATG...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR GCA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTTGGCTAGTACATTTTTaGACTGAAACAGAAGCAATA +
Preference number: 4 (lower is better)
Translates to: ATLVQECPVSFPGYRWISWLVHF*TETEAI
Trigger: TATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCA...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTGTATTGTGCTTCCAGTaGCCCCAGAAGGATTTTAAT +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCVLCFQ*PQKDFN
Trigger: ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATAC...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR GCA 90 bp AATATCACGGATATAGACTTCAAGGTTAAATTGTTCAATTCATGGGCCACACACCGAGCAAGGGTCATCTaGAAACTCGGAGGAGGCGAT +
Preference number: 4 (lower is better)
Translates to: NITDIDFKVKLFNSWATHRARVI*KLGGGD
Trigger: ATCGCCTCCTCCGAGTTTGCAGATGACCCTTGCTCG...GTGTGTGGCCCATGAATTGAACAATTTAACCTTGAAGTCTATATCCGTGATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
CDS-3UTR GCA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTCGAGCAAGGGTCATCTaGAAACTCGGAGGAGGCGAT +
Preference number: 4 (lower is better)
Translates to: VKLFNSWATHLSVLASTFRARVI*KLGGGD
Trigger: ATCGCCTCCTCCGAGTTTGCAGATGACCCTTGCTCG...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTCTAGCAAAGGAACATTaGTTTCCAGGAAAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: RQCELCAQFYENVAKDSSLAKEH*FPGKSQ
Trigger: CTGACTCTTTCCTGGAAACCAATGTTCCTTTGCTAG...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTAGCAAAGGAACATTaGTTTCCAGGAAAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCLAKEH*FPGKSQ
Trigger: CTGACTCTTTCCTGGAAACCAATGTTCCTTTGCTAG...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTCACAGGCTGTCAATCTaGGTGGCTGCCATCCGAACT +
Preference number: 4 (lower is better)
Translates to: VKLFNSWATHLSVLASTFHRLSI*VAAIRT
Trigger: AGTTCGGATGGCAGCCACCCAGATTGACAGCCTGTG...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACATTGTTCAGCGAAGCGTaGCATCACTGTTTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTLFSEA*HHCFRK
Trigger: CTTTCTGAAACAGTGATGCCACGCTTCGCTGAACAA...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATTTGTTCAGCGAAGCGTaGCATCACTGTTTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNLFSEA*HHCFRK
Trigger: CTTTCTGAAACAGTGATGCCACGCTTCGCTGAACAA...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CCA 90 bp GAGTTAGTTAGTGAATACAATGGTATATTAGATACCAGCACTCCAAGCTACACCACGGTTGAGGAACGTTaGCACTCAGGGCTTCAATGG +
Preference number: 4 (lower is better)
Translates to: ELVSEYNGILDTSTPSYTTVEER*HSGLQW
Trigger: CCATTGAAGCCCTGAGTGCCAACGTTCCTCAACCGT...GGTGTAGCTTGGAGTGCTGGTATCTAATATACCATTGTATTCACTAACTAACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CCA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATCGTCGAACTCGTGTCTaGAATTCTTCAGGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNRRTRV*NSSGFS
Trigger: AGAAAAGCCTGAAGAATTCCAGACACGAGTTCGACG...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACACGTCGAACTCGTGTCTaGAATTCTTCAGGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTRRTRV*NSSGFS
Trigger: AGAAAAGCCTGAAGAATTCCAGACACGAGTTCGACG...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCGTCGAACTCGTGTCTaGAATTCTTCAGGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: QCELCAQFYENVAKDSSVRRTRV*NSSGFS
Trigger: AGAAAAGCCTGAAGAATTCCAGACACGAGTTCGACG...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTTTCCCAGGCTACAGATaGATCAGTAGTATTGATCTC +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCFPGYR*ISSIDL
Trigger: GAGATCAATACTACTGATCCATCTGTAGCCTGGGAA...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp GAGTTAGTTAGTGAATACAATGGTATATTAGATACCAGCACTCCAAGCTACACCTGGCACTGTCCAGCATaGAGGAATCACTGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: ELVSEYNGILDTSTPSYTWHCPA*RNHCFH
Trigger: GTGGAAGCAGTGATTCCTCCATGCTGGACAGTGCCA...GGTGTAGCTTGGAGTGCTGGTATCTAATATACCATTGTATTCACTAACTAACTC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361291.8
ENST00000402739.9
CDS-3UTR CCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTACATTACTTCCCACTTaGATGATTGTAGCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFTLLPT*MIVASF
Trigger: GAAGGAAGCTACAATCATCCAAGTGGGAAGTAATGT...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466387.5
CDS-3UTR TCA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATAAAGAGTCAGATATGTaGTCCATCACTGCTTTCCGA +
Preference number: 4 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNKESDM*SITAFR
Trigger: TCGGAAAGCAGTGATGGATCACATATCTGACTCTTT...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR TCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAAAAGAGTCAGATATGTaGTCCATCACTGCTTTCCGA +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTKESDM*SITAFR
Trigger: TCGGAAAGCAGTGATGGATCACATATCTGACTCTTT...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGAAAGAGTCAGATATGTaGTCCATCACTGCTTTCCGA +
Preference number: 4 (lower is better)
Translates to: QCELCAQFYENVAKDSSVKESDM*SITAFR
Trigger: TCGGAAAGCAGTGATGGATCACATATCTGACTCTTT...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATTCTTTGCAGCCTCAATaGGAACTAGCAAAGGAACAT +
Preference number: 4 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNSLQPQ*ELAKEH
Trigger: ATGTTCCTTTGCTAGTTCTCATTGAGGCTGCAAAGA...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR TCA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGTCTTTGCAGCCTCAATaGGAACTAGCAAAGGAACAT +
Preference number: 4 (lower is better)
Translates to: QCELCAQFYENVAKDSSVSLQPQ*ELAKEH
Trigger: ATGTTCCTTTGCTAGTTCTCATTGAGGCTGCAAAGA...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACACATCCTCCAAGATGTaGTTTTCTGAGACAGAGAGG +
Preference number: 4 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHTSSKM*FSETER
Trigger: CCTCTCTGTCTCAGAAAATCACATCTTGGAGGATGT...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR TCA 90 bp AATATCACGGATATAGACTTCAAGGTTAAATTGTTCAATTCATGGGCCACACACGGCGAGAGGCATCGATaGACTCATTCTCCTCAAACG +
Preference number: 4 (lower is better)
Translates to: NITDIDFKVKLFNSWATHGERHR*THSPQT
Trigger: CGTTTGAGGAGAATGAGTTCATCGATGCCTCTCGCC...GTGTGTGGCCCATGAATTGAACAATTTAACCTTGAAGTCTATATCCGTGATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR TCA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTGGCGAGAGGCATCGATaGACTCATTCTCCTCAAACG +
Preference number: 4 (lower is better)
Translates to: VKLFNSWATHLSVLASTFGERHR*THSPQT
Trigger: CGTTTGAGGAGAATGAGTTCATCGATGCCTCTCGCC...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp AATATCACGGATATAGACTTCAAGGTTAAATTGTTCAATTCATGGGCCACACACTGGTCATCCTCAGTCTaGACACTTGTCCTGCTACGC +
Preference number: 4 (lower is better)
Translates to: NITDIDFKVKLFNSWATHWSSSV*TLVLLR
Trigger: GCGTAGCAGGACAAGTGTTCAGACTGAGGATGACCA...GTGTGTGGCCCATGAATTGAACAATTTAACCTTGAAGTCTATATCCGTGATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR TCA 90 bp GAGTTAGTTAGTGAATACAATGGTATATTAGATACCAGCACTCCAAGCTACACCGCTTGGCCAGTACAATaGTATCATTGCCGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: ELVSEYNGILDTSTPSYTAWPVQ*YHCRCR
Trigger: ACGACAGCGGCAATGATATCATTGTACTGGCCAAGC...GGTGTAGCTTGGAGTGCTGGTATCTAATATACCATTGTATTCACTAACTAACTC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR TCA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTCTGCAGATATTAAGCTaGTGGCAATACAAGGCAATT +
Preference number: 4 (lower is better)
Translates to: FPHARGIRAGRYAYKNGILQILS*WQYKAI
Trigger: AATTGCCTTGTATTGCCATCAGCTTAATATCTGCAG...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000541047.5
CDS-3UTR TCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTGCAGATATTAAGCTaGTGGCAATACAAGGCAATT +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCLQILS*WQYKAI
Trigger: AATTGCCTTGTATTGCCATCAGCTTAATATCTGCAG...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000541047.5
CDS-3UTR TCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTCCAGCCCTGACACAATaGGCTCTCCTCCCAGATTCT +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCPALTQ*ALLPDS
Trigger: AGAATCTGGGAGGAGAGCTCATTGTGTCAGGGCTGG...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343114.7
ENST00000466387.5
ENST00000496558.5
ENST00000541047.5
CDS-3UTR TCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTAGGAATCCATTGCTTTaGATTCACTTAAAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFRNPLL*IHLKPV
Trigger: TACAGGCTTTAAGTGAATTCAAAGCAATGGATTCCT...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGGTAGTGAAAGTGCTCTaGACTCCTGTCCCTGACACA +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKVVKVL*TPVPDT
Trigger: TGTGTCAGGGACAGGAGTTCAGAGCACTTTCACTAC...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361291.8
ENST00000402739.9
CDS-3UTR TCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGGGGATAAAAGTCTCATaGCATCTGCCATGTCCGCCA +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKGIKVS*HLPCPP
Trigger: TGGCGGACATGGCAGATGTCATGAGACTTTTATCCC...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR TCA 90 bp CATGAAAAGAGTTACCCAATTCAACAGGTATCCTTTTTCAAGATGACAGTCAGCTCAGGCATCACTTCTTaGCCTGTTCAGTGTCACCCT +
Preference number: 4 (lower is better)
Translates to: HEKSYPIQQVSFFKMTVSSGITS*PVQCHP
Trigger: AGGGTGACACTGAACAGGTCAAGAAGTGATGCCTGA...GCTGACTGTCATCTTGAAAAAGGATACCTGTTGAATTGGGTAACTCTTTTCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409266.5
CDS-3UTR TCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTGATGAGATTGCTGTGTaGTTCATGCATCTCATCTTT +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCDEIAV*FMHLIF
Trigger: AAAGATGAGATGCATGAATCACACAGCAATCTCATC...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466387.5
CDS-3UTR TCA 90 bp GAGTTAGTTAGTGAATACAATGGTATATTAGATACCAGCACTCCAAGCTACACCACGAGGTCAAGAGACTaGGACCATCCTGGCAAACAT +
Preference number: 4 (lower is better)
Translates to: ELVSEYNGILDTSTPSYTTRSRD*DHPGKH
Trigger: ATGTTTGCCAGGATGGTCTCAGTCTCTTGACCTCGT...GGTGTAGCTTGGAGTGCTGGTATCTAATATACCATTGTATTCACTAACTAACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466387.5
CDS-3UTR GCA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACTATGTGATCCATCACTaGTTTCCGAAGCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHYVIHH*FPKLSP
Trigger: AGGAGACAGCTTCGGAAAGCAGTGATGGATCACATA...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR GCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTTATCCTGAGCAACTTTaGTCTGTGGCCGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCYPEQL*SVAGQP
Trigger: TGGCTGCCCGGCCACAGAGCAAAGTTGCTCAGGATA...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTGTCAACACTCGGACCTaGTTCTCCCACTGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: VKLFNSWATHLSVLASTFVNTRT*FSHWSL
Trigger: CAAAGACCAGTGGGAGAAGCAGGTCCGAGTGTTGAC...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp AATATCACGGATATAGACTTCAAGGTTAAATTGTTCAATTCATGGGCCACACACGTCAACACTCGGACCTaGTTCTCCCACTGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: NITDIDFKVKLFNSWATHVNTRT*FSHWSL
Trigger: CAAAGACCAGTGGGAGAAGCAGGTCCGAGTGTTGAC...GTGTGTGGCCCATGAATTGAACAATTTAACCTTGAAGTCTATATCCGTGATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR GCA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTTCTGAACACTTGTCCTaGTACGCACATCATAATCTT +
Preference number: 4 (lower is better)
Translates to: FPHARGIRAGRYAYKNGISEHLS*YAHHNL
Trigger: AAGATTATGATGTGCGTAGCAGGACAAGTGTTCAGA...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATTGGAATATCTCCACCTaGTCAGCTATTTTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNWNIST*SAIFAF
Trigger: GAAGGCAAAAATAGCTGAGCAGGTGGAGATATTCCA...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR GCA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTTCATCTCATCTTACATaGAAACAGACACTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: FPHARGIRAGRYAYKNGISSHLT*KQTLFP
Trigger: AGGGAACAGTGTCTGTTTGCATGTAAGATGAGATGA...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACCACTCCCATAAATATTaGGCCAATGCGAACTCTGTG +
Preference number: 4 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHHSHKY*ANANSV
Trigger: CACAGAGTTCGCATTGGCGCAATATTTATGGGAGTG...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR GCA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTACTTATGCATATACCTaGCAACCTAATGATTCTTGC +
Preference number: 4 (lower is better)
Translates to: HPSHSHKYCANANSVPNFTYAYT*QPNDSC
Trigger: GCAAGAATCATTAGGTTGGCAGGTATATGCATAAGT...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTTTGGTCACCGTATTGTaGTTCCAGTGCCCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: VKLFNSWATHLSVLASTFLVTVL*FQCPQK
Trigger: CTTCTGGGGGCACTGGAAGCACAATACGGTGACCAA...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR GCA 90 bp AATATCACGGATATAGACTTCAAGGTTAAATTGTTCAATTCATGGGCCACACACTTGGTCACCGTATTGTaGTTCCAGTGCCCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: NITDIDFKVKLFNSWATHLVTVL*FQCPQK
Trigger: CTTCTGGGGGCACTGGAAGCACAATACGGTGACCAA...GTGTGTGGCCCATGAATTGAACAATTTAACCTTGAAGTCTATATCCGTGATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR GCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTGCATGGAGGAATCACTaGTTCCACTCCCGATCGGAG +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCAWRNH*FHSRSE
Trigger: CTCCGATCGGGAGTGGAAGCAGTGATTCCTCCATGC...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361291.8
ENST00000402739.9
CDS-3UTR GCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGTCGTCTCACCTTGTTTaGGCACATCCTCTACAGCAG +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKSSHLV*AHPLQQ
Trigger: CTGCTGTAGAGGATGTGCGCAAACAAGGTGAGACGA...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR GCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGAAGTCTCATGACATCTaGCATGTCCGCCAGGATGAG +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKKSHDI*HVRQDE
Trigger: CTCATCCTGGCGGACATGGCAGATGTCATGAGACTT...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR GCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTCATGCATCTCATCTTTaGAGGGACATTAGAATTGTG +
Preference number: 4 (lower is better)
Translates to: RQCELCAQFYENVAKDSSHASHL*RDIRIV
Trigger: CACAATTCTAATGTCCCTGCAAAGATGAGATGCATG...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466387.5
CDS-3UTR GCA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATCAAGCCTTTCAAAGCTaGTGTTACATAACCCTCAAG +
Preference number: 4 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNQAFQS*CYITLK
Trigger: CTTGAGGGTTATGTAACAGCAGCTTTGAAAGGCTTG...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466387.5
CDS-3UTR CCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTGCGGCATTGATGACCTaGGGACACAGGCTGTCAATC +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCAALMT*GHRLSI
Trigger: GATTGACAGCCTGTGTCCCCAGGTCATCAATGCCGC...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTTCCACATCGCCCTCTTaGAGGGCTATCACACACTTG +
Preference number: 4 (lower is better)
Translates to: VKLFNSWATHLSVLASTFSTSPS*RAITHL
Trigger: CAAGTGTGTGATAGCCCTCCAAGAGGGCGATGTGGA...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACTTGTTCAGCGAAGCGTaGCATCACTGTTTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHLFSEA*HHCFRK
Trigger: CTTTCTGAAACAGTGATGCCACGCTTCGCTGAACAA...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CCA 90 bp AATATCACGGATATAGACTTCAAGGTTAAATTGTTCAATTCATGGGCCACACACACGGTTGAGGAACGTTaGCACTCAGGGCTTCAATGG +
Preference number: 4 (lower is better)
Translates to: NITDIDFKVKLFNSWATHTVEER*HSGLQW
Trigger: CCATTGAAGCCCTGAGTGCCAACGTTCCTCAACCGT...GTGTGTGGCCCATGAATTGAACAATTTAACCTTGAAGTCTATATCCGTGATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CCA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTACGGTTGAGGAACGTTaGCACTCAGGGCTTCAATGG +
Preference number: 4 (lower is better)
Translates to: VKLFNSWATHLSVLASTFTVEER*HSGLQW
Trigger: CCATTGAAGCCCTGAGTGCCAACGTTCCTCAACCGT...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACCAGAGGCATACGAGCTaGCAGGTATGCATACAAAAA +
Preference number: 4 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHQRHTS*QVCIQK
Trigger: TTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTG...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR TCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTTATCAATCGCAATGTTaGGAGGATCTCCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCYQSQC*EDLLFL
Trigger: AAGAAAAAGGAGATCCTCTCAACATTGCGATTGATA...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACTCTTTGCAGCCTCAATaGGAACTAGCAAAGGAACAT +
Preference number: 4 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHSLQPQ*ELAKEH
Trigger: ATGTTCCTTTGCTAGTTCTCATTGAGGCTGCAAAGA...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR TCA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTACGTCCATGTTATCCTaGGCAACTTTGCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: VKLFNSWATHLSVLASTFTSMLS*ATLLCG
Trigger: GCCACAGAGCAAAGTTGCTCAGGATAACATGGACGT...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTTTCTCCTCAAACGGTTaGGGAACGTTGGCACTCAGG +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCFSSNG*GTLALR
Trigger: CCTGAGTGCCAACGTTCCTCAACCGTTTGAGGAGAA...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTGTTCTTCTGGGGTCCTaGTCATCAGCACAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCVLLGS*SSAQPF
Trigger: GAAAGGCTGTGCTGATGATCAGGACCCCAGAAGAAC...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTTGGTCATCCTCAGTCTaGACACTTGTCCTGCTACGC +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCWSSSV*TLVLLR
Trigger: GCGTAGCAGGACAAGTGTTCAGACTGAGGATGACCA...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GAGTTAGTTAGTGAATACAATGGTATATTAGATACCAGCACTCCAAGCTACACCATCCTGCTTACATGCTaGATCAGGACACTGATCAGC +
Preference number: 4 (lower is better)
Translates to: ELVSEYNGILDTSTPSYTILLTC*IRTLIS
Trigger: GCTGATCAGTGTCCTGATTCAGCATGTAAGCAGGAT...GGTGTAGCTTGGAGTGCTGGTATCTAATATACCATTGTATTCACTAACTAACTC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000541047.5
CDS-3UTR TCA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCTGCAGATATTAAGCTaGTGGCAATACAAGGCAATT +
Preference number: 4 (lower is better)
Translates to: QCELCAQFYENVAKDSSVLQILS*WQYKAI
Trigger: AATTGCCTTGTATTGCCATCAGCTTAATATCTGCAG...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000541047.5
CDS-3UTR TCA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATCTGCAGATATTAAGCTaGTGGCAATACAAGGCAATT +
Preference number: 4 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNLQILS*WQYKAI
Trigger: AATTGCCTTGTATTGCCATCAGCTTAATATCTGCAG...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000541047.5
CDS-3UTR TCA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTACACAACAGGTGAGTTaGCAGCTGCTGTCCCATAGA +
Preference number: 4 (lower is better)
Translates to: VKLFNSWATHLSVLASTFTQQVS*QLLSHR
Trigger: TCTATGGGACAGCAGCTGTCAACTCACCTGTTGTGT...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp AATATCACGGATATAGACTTCAAGGTTAAATTGTTCAATTCATGGGCCACACACACACAACAGGTGAGTTaGCAGCTGCTGTCCCATAGA +
Preference number: 4 (lower is better)
Translates to: NITDIDFKVKLFNSWATHTQQVS*QLLSHR
Trigger: TCTATGGGACAGCAGCTGTCAACTCACCTGTTGTGT...GTGTGTGGCCCATGAATTGAACAATTTAACCTTGAAGTCTATATCCGTGATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR TCA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTAGGAATCCATTGCTTTaGATTCACTTAAAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: FPHARGIRAGRYAYKNGIRNPLL*IHLKPV
Trigger: TACAGGCTTTAAGTGAATTCAAAGCAATGGATTCCT...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTCCCTGCCCCCATCTATaGCATCACAATCTACCTCAT +
Preference number: 4 (lower is better)
Translates to: VKLFNSWATHLSVLASTFPCPHL*HHNLPH
Trigger: ATGAGGTAGATTGTGATGTCATAGATGGGGGCAGGG...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361291.8
ENST00000402739.9
CDS-3UTR TCA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACTCTTCTTTGAGATCTTaGCTCTCCTTAGCGATCTGT +
Preference number: 4 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHSSLRS*LSLAIC
Trigger: ACAGATCGCTAAGGAGAGTCAAGATCTCAAAGAAGA...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
CDS-3UTR TCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGCCTCCTGGACTTGTTTaGACACATAATCTCGGTTGG +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKPPGLV*THNLGW
Trigger: CCAACCGAGATTATGTGTTCAAACAAGTCCAGGAGG...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR TCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGTTAGGTTCAGCCAGATaGCATTCATGGACAGTCTCC +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKLGSAR*HSWTVS
Trigger: GGAGACTGTCCATGAATGTCATCTGGCTGAACCTAA...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466387.5
CDS-3UTR GCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTGTCAACACTCGGACCTaGTTCTCCCACTGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCVNTRT*FSHWSL
Trigger: CAAAGACCAGTGGGAGAAGCAGGTCCGAGTGTTGAC...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACATCTGAACACTTGTCCTaGTACGCACATCATAATCTT +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTSEHLS*YAHHNL
Trigger: AAGATTATGATGTGCGTAGCAGGACAAGTGTTCAGA...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGTCTGAACACTTGTCCTaGTACGCACATCATAATCTT +
Preference number: 4 (lower is better)
Translates to: QCELCAQFYENVAKDSSVSEHLS*YAHHNL
Trigger: AAGATTATGATGTGCGTAGCAGGACAAGTGTTCAGA...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTTTTGCCTTCTCCTCCTaGGGTAGTTGCGCCATGATG +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCFAFSS*GSCAMM
Trigger: CATCATGGCGCAACTACCGCAGGAGGAGAAGGCAAA...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACTGGAATATCTCCACCTaGTCAGCTATTTTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHWNIST*SAIFAF
Trigger: GAAGGCAAAAATAGCTGAGCAGGTGGAGATATTCCA...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR GCA 90 bp GAGTTAGTTAGTGAATACAATGGTATATTAGATACCAGCACTCCAAGCTACACCGTCCATTCGAGAACCTaGTTCGGCAATTTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: ELVSEYNGILDTSTPSYTVHSRT*FGNFLG
Trigger: GCCAAGAAAATTGCCGAAGCAGGTTCTCGAATGGAC...GGTGTAGCTTGGAGTGCTGGTATCTAATATACCATTGTATTCACTAACTAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR GCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGCATCAGGTTTTTAGCTaGCTGGATAAGCGATGTGGC +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKHQVFS*LDKRCG
Trigger: GCCACATCGCTTATCCAGGCAGCTAAAAACCTGATG...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACATCATCTCATCTTACATaGAAACAGACACTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTSSHLT*KQTLFP
Trigger: AGGGAACAGTGTCTGTTTGCATGTAAGATGAGATGA...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTACTTATGCATATACCTaGCAACCTAATGATTCTTGC +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCTYAYT*QPNDSC
Trigger: GCAAGAATCATTAGGTTGGCAGGTATATGCATAAGT...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACGTATTGTGCTTCCAGTaGCCCCAGAAGGATTTTAAT +
Preference number: 4 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHVLCFQ*PQKDFN
Trigger: ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATAC...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR GCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTTTGGTCACCGTATTGTaGTTCCAGTGCCCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCLVTVL*FQCPQK
Trigger: CTTCTGGGGGCACTGGAAGCACAATACGGTGACCAA...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR GCA 90 bp AATATCACGGATATAGACTTCAAGGTTAAATTGTTCAATTCATGGGCCACACACTCGTCTCACCTTGTTTaGGCACATCCTCTACAGCAG +
Preference number: 4 (lower is better)
Translates to: NITDIDFKVKLFNSWATHSSHLV*AHPLQQ
Trigger: CTGCTGTAGAGGATGTGCGCAAACAAGGTGAGACGA...GTGTGTGGCCCATGAATTGAACAATTTAACCTTGAAGTCTATATCCGTGATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
CDS-3UTR GCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCTTTAAAACGGTTTaGAAGGTCTTGCTCATTTGT +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCLFKTV*KVLLIC
Trigger: ACAAATGAGCAAGACCTTGCAAACCGTTTTAAAGAG...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGCACTCAGGGCTTCAATaGCAACCTCTACTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKHSGLQ*QPLLVQ
Trigger: CTGAACAAGTAGAGGTTGCCATTGAAGCCCTGAGTG...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp GAGTTAGTTAGTGAATACAATGGTATATTAGATACCAGCACTCCAAGCTACACCAGGTTTTTAGCTGCCTaGATAAGCGATGTGGCACTG +
Preference number: 4 (lower is better)
Translates to: ELVSEYNGILDTSTPSYTRFLAA*ISDVAL
Trigger: CAGTGCCACATCGCTTATCCAGGCAGCTAAAAACCT...GGTGTAGCTTGGAGTGCTGGTATCTAATATACCATTGTATTCACTAACTAACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTAAATTGTTCAATTCATaGGCCACACACTTAAGCGTA +
Preference number: 4 (lower is better)
Translates to: RQCELCAQFYENVAKDSSKLFNS*ATHLSV
Trigger: TACGCTTAAGTGTGTGGCCCATGAATTGAACAATTT...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTAAATTGTTCAATTCATaGGCCACACACTTAAGCGTA +
Preference number: 4 (lower is better)
Translates to: FPHARGIRAGRYAYKNGIKLFNS*ATHLSV
Trigger: TACGCTTAAGTGTGTGGCCCATGAATTGAACAATTT...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTAAATTGTTCAATTCATaGGCCACACACTTAAGCGTA +
Preference number: 4 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCKLFNS*ATHLSV
Trigger: TACGCTTAAGTGTGTGGCCCATGAATTGAACAATTT...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp AATATCACGGATATAGACTTCAAGGTTAAATTGTTCAATTCATGGGCCACACACCCAGGAAATTCTGAGTaGCTTGCTCTACAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: NITDIDFKVKLFNSWATHPGNSE*LALQRQ
Trigger: CTGCCTCTGTAGAGCAAGCCACTCAGAATTTCCTGG...GTGTGTGGCCCATGAATTGAACAATTTAACCTTGAAGTCTATATCCGTGATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
CDS-3UTR CCA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTCCGTGTACAGCATTGTaGCATTCTTCTTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: VKLFNSWATHLSVLASTFPCTAL*HSSSEP
Trigger: GGGCTCTGAAGAAGAATGCCACAATGCTGTACACGG...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGCAAACTAGGTGGGTTTaGAAAGCATTTCCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKQTRWV*KAFPLS
Trigger: GGAGAGGGGAAATGCTTTCCAAACCCACCTAGTTTG...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541047.5
CDS-3UTR TCA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATTATCAATCGCAATGTTaGGAGGATCTCCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNYQSQC*EDLLFL
Trigger: AAGAAAAAGGAGATCCTCTCAACATTGCGATTGATA...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR TCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTACGTCCATGTTATCCTaGGCAACTTTGCTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCTSMLS*ATLLCG
Trigger: GCCACAGAGCAAAGTTGCTCAGGATAACATGGACGT...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTACACAACAGGTGAGTTaGCAGCTGCTGTCCCATAGA +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCTQQVS*QLLSHR
Trigger: TCTATGGGACAGCAGCTGTCAACTCACCTGTTGTGT...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAAGGAATCCATTGCTTTaGATTCACTTAAAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTRNPLL*IHLKPV
Trigger: TACAGGCTTTAAGTGAATTCAAAGCAATGGATTCCT...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATAGGAATCCATTGCTTTaGATTCACTTAAAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNRNPLL*IHLKPV
Trigger: TACAGGCTTTAAGTGAATTCAAAGCAATGGATTCCT...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR TCA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGAGGAATCCATTGCTTTaGATTCACTTAAAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: QCELCAQFYENVAKDSSVRNPLL*IHLKPV
Trigger: TACAGGCTTTAAGTGAATTCAAAGCAATGGATTCCT...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTCTGTATATTTTGTTCTaGTGGCTGGGCGCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCLYILF*WLGAVA
Trigger: AGCCACTGCGCCCAGCCATCAGAACAAAATATACAG...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000466387.5
CDS-3UTR GCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGTATGTGATCCATCACTaGTTTCCGAAGCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKYVIHH*FPKLSP
Trigger: AGGAGACAGCTTCGGAAAGCAGTGATGGATCACATA...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GAGTTAGTTAGTGAATACAATGGTATATTAGATACCAGCACTCCAAGCTACACCTATGTGATCCATCACTaGTTTCCGAAGCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: ELVSEYNGILDTSTPSYTYVIHH*FPKLSP
Trigger: AGGAGACAGCTTCGGAAAGCAGTGATGGATCACATA...GGTGTAGCTTGGAGTGCTGGTATCTAATATACCATTGTATTCACTAACTAACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR GCA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTCATCAGGTTTTTAGCTaGCTGGATAAGCGATGTGGC +
Preference number: 4 (lower is better)
Translates to: VKLFNSWATHLSVLASTFHQVFS*LDKRCG
Trigger: GCCACATCGCTTATCCAGGCAGCTAAAAACCTGATG...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp AATATCACGGATATAGACTTCAAGGTTAAATTGTTCAATTCATGGGCCACACACCAAAGGACAGCTCTGTaGCACCTTAGTACAGGAATG +
Preference number: 4 (lower is better)
Translates to: NITDIDFKVKLFNSWATHQRTAL*HLSTGM
Trigger: CATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTG...GTGTGTGGCCCATGAATTGAACAATTTAACCTTGAAGTCTATATCCGTGATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR GCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAACTTATGCATATACCTaGCAACCTAATGATTCTTGC +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTTYAYT*QPNDSC
Trigger: GCAAGAATCATTAGGTTGGCAGGTATATGCATAAGT...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGACTTATGCATATACCTaGCAACCTAATGATTCTTGC +
Preference number: 4 (lower is better)
Translates to: QCELCAQFYENVAKDSSVTYAYT*QPNDSC
Trigger: GCAAGAATCATTAGGTTGGCAGGTATATGCATAAGT...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTTGGCTAGTACATTTTTaGACTGAAACAGAAGCAATA +
Preference number: 4 (lower is better)
Translates to: RQCELCAQFYENVAKDSSWLVHF*TETEAI
Trigger: TATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCA...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATCTGTTGTCTTCTTGCTaGTACATAGTTAAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNLLSSC*YIVKFH
Trigger: GTGAAACTTAACTATGTAGCAGCAAGAAGACAACAG...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
CDS-3UTR GCA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCTGTTGTCTTCTTGCTaGTACATAGTTAAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: QCELCAQFYENVAKDSSVLLSSC*YIVKFH
Trigger: GTGAAACTTAACTATGTAGCAGCAAGAAGACAACAG...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTGGCTGTCAATCTGGGTaGCTGCCATCCGAACTAATT +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCGCQSG*LPSELI
Trigger: AATTAGTTCGGATGGCAGCCACCCAGATTGACAGCC...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTACCTGCTTCTCCCACTaGTCTTTGAAGACGTCCATG +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCTCFSH*SLKTSM
Trigger: CATGGACGTCTTCAAAGACCAGTGGGAGAAGCAGGT...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp GAGTTAGTTAGTGAATACAATGGTATATTAGATACCAGCACTCCAAGCTACACCTTGTTCAGCGAAGCGTaGCATCACTGTTTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: ELVSEYNGILDTSTPSYTLFSEA*HHCFRK
Trigger: CTTTCTGAAACAGTGATGCCACGCTTCGCTGAACAA...GGTGTAGCTTGGAGTGCTGGTATCTAATATACCATTGTATTCACTAACTAACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CCA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTAGGTTTTTAGCTGCCTaGATAAGCGATGTGGCACTG +
Preference number: 4 (lower is better)
Translates to: VKLFNSWATHLSVLASTFRFLAA*ISDVAL
Trigger: CAGTGCCACATCGCTTATCCAGGCAGCTAAAAACCT...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp AATATCACGGATATAGACTTCAAGGTTAAATTGTTCAATTCATGGGCCACACACAGGTTTTTAGCTGCCTaGATAAGCGATGTGGCACTG +
Preference number: 4 (lower is better)
Translates to: NITDIDFKVKLFNSWATHRFLAA*ISDVAL
Trigger: CAGTGCCACATCGCTTATCCAGGCAGCTAAAAACCT...GTGTGTGGCCCATGAATTGAACAATTTAACCTTGAAGTCTATATCCGTGATATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CCA 90 bp GAGTTAGTTAGTGAATACAATGGTATATTAGATACCAGCACTCCAAGCTACACCAGACCTTCTGGTATTTaGTTGAGGCCACATAGGATG +
Preference number: 4 (lower is better)
Translates to: ELVSEYNGILDTSTPSYTRPSGI*LRPHRM
Trigger: CATCCTATGTGGCCTCAACCAAATACCAGAAGGTCT...GGTGTAGCTTGGAGTGCTGGTATCTAATATACCATTGTATTCACTAACTAACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGAGACCTTCTGGTATTTaGTTGAGGCCACATAGGATG +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKRPSGI*LRPHRM
Trigger: CATCCTATGTGGCCTCAACCAAATACCAGAAGGTCT...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGCGTCGAACTCGTGTCTaGAATTCTTCAGGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKRRTRV*NSSGFS
Trigger: AGAAAAGCCTGAAGAATTCCAGACACGAGTTCGACG...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGAAATTGTTCAATTCATaGGCCACACACTTAAGCGTA +
Preference number: 4 (lower is better)
Translates to: QCELCAQFYENVAKDSSVKLFNS*ATHLSV
Trigger: TACGCTTAAGTGTGTGGCCCATGAATTGAACAATTT...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACTATCAATCGCAATGTTaGGAGGATCTCCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHYQSQC*EDLLFL
Trigger: AAGAAAAAGGAGATCCTCTCAACATTGCGATTGATA...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR TCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGAAAGAGTCAGATATGTaGTCCATCACTGCTTTCCGA +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKKESDM*SITAFR
Trigger: TCGGAAAGCAGTGATGGATCACATATCTGACTCTTT...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTATCCTGCTTACATGCTaGATCAGGACACTGATCAGC +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCILLTC*IRTLIS
Trigger: GCTGATCAGTGTCCTGATTCAGCATGTAAGCAGGAT...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000541047.5
CDS-3UTR TCA 90 bp AATATCACGGATATAGACTTCAAGGTTAAATTGTTCAATTCATGGGCCACACACCTTCTGGTATTTGGTTaGGGCCACATAGGATGCTTT +
Preference number: 4 (lower is better)
Translates to: NITDIDFKVKLFNSWATHLLVFG*GHIGCF
Trigger: AAAGCATCCTATGTGGCCTCAACCAAATACCAGAAG...GTGTGTGGCCCATGAATTGAACAATTTAACCTTGAAGTCTATATCCGTGATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR TCA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTCTTCTGGTATTTGGTTaGGGCCACATAGGATGCTTT +
Preference number: 4 (lower is better)
Translates to: VKLFNSWATHLSVLASTFLLVFG*GHIGCF
Trigger: AAAGCATCCTATGTGGCCTCAACCAAATACCAGAAG...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTGAAATGTGTTTCTTCTaGGAACCTCGTCGAACTCGT +
Preference number: 4 (lower is better)
Translates to: VKLFNSWATHLSVLASTFEMCFF*EPRRTR
Trigger: ACGAGTTCGACGAGGTTCTCAGAAGAAACACATTTC...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp AATATCACGGATATAGACTTCAAGGTTAAATTGTTCAATTCATGGGCCACACACGAAATGTGTTTCTTCTaGGAACCTCGTCGAACTCGT +
Preference number: 4 (lower is better)
Translates to: NITDIDFKVKLFNSWATHEMCFF*EPRRTR
Trigger: ACGAGTTCGACGAGGTTCTCAGAAGAAACACATTTC...GTGTGTGGCCCATGAATTGAACAATTTAACCTTGAAGTCTATATCCGTGATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR TCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGTTTCAGAATGATAGGTaGAGTTGCCGAAGTCATGCT +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKFQNDR*SCRSHA
Trigger: AGCATGACTTCGGCAACTTCACCTATCATTCTGAAA...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR GCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGGCTCCAGACATGGTATaGATCTCAGAAGTCTTCATA +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKAPDMV*ISEVFI
Trigger: TATGAAGACTTCTGAGATGCATACCATGTCTGGAGC...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000540488.5
CDS-3UTR GCA 90 bp AATATCACGGATATAGACTTCAAGGTTAAATTGTTCAATTCATGGGCCACACACTTTCCTTCCAGTCTGTaGTCCAGACATGGTATGCAT +
Preference number: 4 (lower is better)
Translates to: NITDIDFKVKLFNSWATHFPSSL*SRHGMH
Trigger: ATGCATACCATGTCTGGAGCACAGACTGGAAGGAAA...GTGTGTGGCCCATGAATTGAACAATTTAACCTTGAAGTCTATATCCGTGATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000540488.5
CDS-3UTR GCA 90 bp AATATCACGGATATAGACTTCAAGGTTAAATTGTTCAATTCATGGGCCACACACTATGTGATCCATCACTaGTTTCCGAAGCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: NITDIDFKVKLFNSWATHYVIHH*FPKLSP
Trigger: AGGAGACAGCTTCGGAAAGCAGTGATGGATCACATA...GTGTGTGGCCCATGAATTGAACAATTTAACCTTGAAGTCTATATCCGTGATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR GCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGTGGAATATCTCCACCTaGTCAGCTATTTTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKWNIST*SAIFAF
Trigger: GAAGGCAAAAATAGCTGAGCAGGTGGAGATATTCCA...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTGTCCATTCGAGAACCTaGTTCGGCAATTTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCVHSRT*FGNFLG
Trigger: GCCAAGAAAATTGCCGAAGCAGGTTCTCGAATGGAC...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTCAAAGGACAGCTCTGTaGCACCTTAGTACAGGAATG +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCQRTAL*HLSTGM
Trigger: CATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTG...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTCACTCCCATAAATATTaGGCCAATGCGAACTCTGTG +
Preference number: 4 (lower is better)
Translates to: VKLFNSWATHLSVLASTFHSHKY*ANANSV
Trigger: CACAGAGTTCGCATTGGCGCAATATTTATGGGAGTG...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACATGGCTAGTACATTTTTaGACTGAAACAGAAGCAATA +
Preference number: 4 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTWLVHF*TETEAI
Trigger: TATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCA...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATTGGCTAGTACATTTTTaGACTGAAACAGAAGCAATA +
Preference number: 4 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNWLVHF*TETEAI
Trigger: TATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCA...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR GCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGGTATTGTGCTTCCAGTaGCCCCAGAAGGATTTTAAT +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKVLCFQ*PQKDFN
Trigger: ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATAC...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR GCA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACCTGTTGTCTTCTTGCTaGTACATAGTTAAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHLLSSC*YIVKFH
Trigger: GTGAAACTTAACTATGTAGCAGCAAGAAGACAACAG...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
CDS-3UTR CCA 90 bp AATATCACGGATATAGACTTCAAGGTTAAATTGTTCAATTCATGGGCCACACACTCTGTGCTCCAGACATaGTATGCATCTCAGAAGTCT +
Preference number: 4 (lower is better)
Translates to: NITDIDFKVKLFNSWATHSVLQT*YASQKS
Trigger: AGACTTCTGAGATGCATACCATGTCTGGAGCACAGA...GTGTGTGGCCCATGAATTGAACAATTTAACCTTGAAGTCTATATCCGTGATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000540488.5
CDS-3UTR CCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGCTAGCAAAGGAACATTaGTTTCCAGGAAAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKLAKEH*FPGKSQ
Trigger: CTGACTCTTTCCTGGAAACCAATGTTCCTTTGCTAG...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTCACTCAGGGCTTCAATaGCAACCTCTACTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCHSGLQ*QPLLVQ
Trigger: CTGAACAAGTAGAGGTTGCCATTGAAGCCCTGAGTG...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTAGGTTTTTAGCTGCCTaGATAAGCGATGTGGCACTG +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCRFLAA*ISDVAL
Trigger: CAGTGCCACATCGCTTATCCAGGCAGCTAAAAACCT...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTAGACCTTCTGGTATTTaGTTGAGGCCACATAGGATG +
Preference number: 4 (lower is better)
Translates to: VKLFNSWATHLSVLASTFRPSGI*LRPHRM
Trigger: CATCCTATGTGGCCTCAACCAAATACCAGAAGGTCT...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp GAGTTAGTTAGTGAATACAATGGTATATTAGATACCAGCACTCCAAGCTACACCTTCCCAGGCTACAGATaGATCAGTAGTATTGATCTC +
Preference number: 4 (lower is better)
Translates to: ELVSEYNGILDTSTPSYTFPGYR*ISSIDL
Trigger: GAGATCAATACTACTGATCCATCTGTAGCCTGGGAA...GGTGTAGCTTGGAGTGCTGGTATCTAATATACCATTGTATTCACTAACTAACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR TCA 90 bp AATATCACGGATATAGACTTCAAGGTTAAATTGTTCAATTCATGGGCCACACACAAAGAGTCAGATATGTaGTCCATCACTGCTTTCCGA +
Preference number: 4 (lower is better)
Translates to: NITDIDFKVKLFNSWATHKESDM*SITAFR
Trigger: TCGGAAAGCAGTGATGGATCACATATCTGACTCTTT...GTGTGTGGCCCATGAATTGAACAATTTAACCTTGAAGTCTATATCCGTGATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR TCA 90 bp AATATCACGGATATAGACTTCAAGGTTAAATTGTTCAATTCATGGGCCACACACTCTTTGCAGCCTCAATaGGAACTAGCAAAGGAACAT +
Preference number: 4 (lower is better)
Translates to: NITDIDFKVKLFNSWATHSLQPQ*ELAKEH
Trigger: ATGTTCCTTTGCTAGTTCTCATTGAGGCTGCAAAGA...GTGTGTGGCCCATGAATTGAACAATTTAACCTTGAAGTCTATATCCGTGATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR TCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTACATCCTCCAAGATGTaGTTTTCTGAGACAGAGAGG +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCTSSKM*FSETER
Trigger: CCTCTCTGTCTCAGAAAATCACATCTTGGAGGATGT...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTCTTCTGGTATTTGGTTaGGGCCACATAGGATGCTTT +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCLLVFG*GHIGCF
Trigger: AAAGCATCCTATGTGGCCTCAACCAAATACCAGAAG...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp AATATCACGGATATAGACTTCAAGGTTAAATTGTTCAATTCATGGGCCACACACCTGTGCCCAATTTTATaGGAATGTTGCAAAGGACAG +
Preference number: 4 (lower is better)
Translates to: NITDIDFKVKLFNSWATHLCPIL*ECCKGQ
Trigger: CTGTCCTTTGCAACATTCTCATAAAATTGGGCACAG...GTGTGTGGCCCATGAATTGAACAATTTAACCTTGAAGTCTATATCCGTGATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR TCA 90 bp AGTTACCCAATTCAACAGGTATCCTTTTTCAAGATGACAGTCAGCAATACAGATTTTCAGAATGATAGGTaGAGTTGCCGAAGTCATGCT +
Preference number: 4 (lower is better)
Translates to: SYPIQQVSFFKMTVSNTDFQNDR*SCRSHA
Trigger: AGCATGACTTCGGCAACTTCACCTATCATTCTGAAA...ATCTGTATTGCTGACTGTCATCTTGAAAAAGGATACCTGTTGAATTGGGTAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409266.5
CDS-3UTR TCA 90 bp AGTTACCCAATTCAACAGGTATCCTTTTTCAAGATGACAGTCAGCAATACAGATCCTTTGGTTATGTTTTaGGACTCAACTCAGGCATCA +
Preference number: 4 (lower is better)
Translates to: SYPIQQVSFFKMTVSNTDPLVMF*DSTQAS
Trigger: TGATGCCTGAGTTGAGTCTCAAAACATAACCAAAGG...ATCTGTATTGCTGACTGTCATCTTGAAAAAGGATACCTGTTGAATTGGGTAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409266.5
CDS-3UTR GCA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTGCTCCAGACATGGTATaGATCTCAGAAGTCTTCATA +
Preference number: 4 (lower is better)
Translates to: VKLFNSWATHLSVLASTFAPDMV*ISEVFI
Trigger: TATGAAGACTTCTGAGATGCATACCATGTCTGGAGC...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000540488.5
CDS-3UTR GCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTTTTCCTTCCAGTCTGTaGTCCAGACATGGTATGCAT +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCFPSSL*SRHGMH
Trigger: ATGCATACCATGTCTGGAGCACAGACTGGAAGGAAA...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000540488.5
CDS-3UTR GCA 90 bp GAGTTAGTTAGTGAATACAATGGTATATTAGATACCAGCACTCCAAGCTACACCTCTGAACACTTGTCCTaGTACGCACATCATAATCTT +
Preference number: 4 (lower is better)
Translates to: ELVSEYNGILDTSTPSYTSEHLS*YAHHNL
Trigger: AAGATTATGATGTGCGTAGCAGGACAAGTGTTCAGA...GGTGTAGCTTGGAGTGCTGGTATCTAATATACCATTGTATTCACTAACTAACTC
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR GCA 90 bp AATATCACGGATATAGACTTCAAGGTTAAATTGTTCAATTCATGGGCCACACACTGGAATATCTCCACCTaGTCAGCTATTTTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: NITDIDFKVKLFNSWATHWNIST*SAIFAF
Trigger: GAAGGCAAAAATAGCTGAGCAGGTGGAGATATTCCA...GTGTGTGGCCCATGAATTGAACAATTTAACCTTGAAGTCTATATCCGTGATATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR GCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTCACTCCCATAAATATTaGGCCAATGCGAACTCTGTG +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCHSHKY*ANANSV
Trigger: CACAGAGTTCGCATTGGCGCAATATTTATGGGAGTG...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACTGGCTAGTACATTTTTaGACTGAAACAGAAGCAATA +
Preference number: 4 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHWLVHF*TETEAI
Trigger: TATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCA...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR GCA 90 bp TTTCATGAAAAGAGTTACCCAATTCAACAGGTATCCTTTTTCAAGATGACAGTCTGCTTCCCTCGACTGTaGCATAAATCTCACTCTACT +
Preference number: 4 (lower is better)
Translates to: FHEKSYPIQQVSFFKMTVCFPRL*HKSHST
Trigger: AGTAGAGTGAGATTTATGGCACAGTCGAGGGAAGCA...GACTGTCATCTTGAAAAAGGATACCTGTTGAATTGGGTAACTCTTTTCATGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409266.5
CDS-3UTR GCA 90 bp CATGAAAAGAGTTACCCAATTCAACAGGTATCCTTTTTCAAGATGACAGTCAGCAAGTTGCCGAAGTCATaGTCCTTTGGTTATGTTTTG +
Preference number: 4 (lower is better)
Translates to: HEKSYPIQQVSFFKMTVSKLPKS*SFGYVL
Trigger: CAAAACATAACCAAAGGAGCATGACTTCGGCAACTT...GCTGACTGTCATCTTGAAAAAGGATACCTGTTGAATTGGGTAACTCTTTTCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409266.5
CDS-3UTR CCA 90 bp AATATCACGGATATAGACTTCAAGGTTAAATTGTTCAATTCATGGGCCACACACCTAGCAAAGGAACATTaGTTTCCAGGAAAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: NITDIDFKVKLFNSWATHLAKEH*FPGKSQ
Trigger: CTGACTCTTTCCTGGAAACCAATGTTCCTTTGCTAG...GTGTGTGGCCCATGAATTGAACAATTTAACCTTGAAGTCTATATCCGTGATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTAGACCTTCTGGTATTTaGTTGAGGCCACATAGGATG +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCRPSGI*LRPHRM
Trigger: CATCCTATGTGGCCTCAACCAAATACCAGAAGGTCT...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTCGTCGAACTCGTGTCTaGAATTCTTCAGGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCRRTRV*NSSGFS
Trigger: AGAAAAGCCTGAAGAATTCCAGACACGAGTTCGACG...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GAGTTAGTTAGTGAATACAATGGTATATTAGATACCAGCACTCCAAGCTACACCTATCAATCGCAATGTTaGGAGGATCTCCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: ELVSEYNGILDTSTPSYTYQSQC*EDLLFL
Trigger: AAGAAAAAGGAGATCCTCTCAACATTGCGATTGATA...GGTGTAGCTTGGAGTGCTGGTATCTAATATACCATTGTATTCACTAACTAACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR TCA 90 bp GAGTTAGTTAGTGAATACAATGGTATATTAGATACCAGCACTCCAAGCTACACCAGGAATCCATTGCTTTaGATTCACTTAAAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: ELVSEYNGILDTSTPSYTRNPLL*IHLKPV
Trigger: TACAGGCTTTAAGTGAATTCAAAGCAATGGATTCCT...GGTGTAGCTTGGAGTGCTGGTATCTAATATACCATTGTATTCACTAACTAACTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR TCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGAGGAATCCATTGCTTTaGATTCACTTAAAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKRNPLL*IHLKPV
Trigger: TACAGGCTTTAAGTGAATTCAAAGCAATGGATTCCT...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTCTGTGCCCAATTTTATaGGAATGTTGCAAAGGACAG +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCLCPIL*ECCKGQ
Trigger: CTGTCCTTTGCAACATTCTCATAAAATTGGGCACAG...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTTCTGAACACTTGTCCTaGTACGCACATCATAATCTT +
Preference number: 4 (lower is better)
Translates to: VKLFNSWATHLSVLASTFSEHLS*YAHHNL
Trigger: AAGATTATGATGTGCGTAGCAGGACAAGTGTTCAGA...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp AATATCACGGATATAGACTTCAAGGTTAAATTGTTCAATTCATGGGCCACACACTCTGAACACTTGTCCTaGTACGCACATCATAATCTT +
Preference number: 4 (lower is better)
Translates to: NITDIDFKVKLFNSWATHSEHLS*YAHHNL
Trigger: AAGATTATGATGTGCGTAGCAGGACAAGTGTTCAGA...GTGTGTGGCCCATGAATTGAACAATTTAACCTTGAAGTCTATATCCGTGATATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR GCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTTGGAATATCTCCACCTaGTCAGCTATTTTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCWNIST*SAIFAF
Trigger: GAAGGCAAAAATAGCTGAGCAGGTGGAGATATTCCA...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTTCATCTCATCTTACATaGAAACAGACACTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: VKLFNSWATHLSVLASTFSSHLT*KQTLFP
Trigger: AGGGAACAGTGTCTGTTTGCATGTAAGATGAGATGA...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGCTCTTTAAAACGGTTTaGAAGGTCTTGCTCATTTGT +
Preference number: 4 (lower is better)
Translates to: PANLMILACIRVCFCRVKLFKTV*KVLLIC
Trigger: ACAAATGAGCAAGACCTTGCAAACCGTTTTAAAGAG...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTCTAGCAAAGGAACATTaGTTTCCAGGAAAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCLAKEH*FPGKSQ
Trigger: CTGACTCTTTCCTGGAAACCAATGTTCCTTTGCTAG...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTTTCCCAGGCTACAGATaGATCAGTAGTATTGATCTC +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCFPGYR*ISSIDL
Trigger: GAGATCAATACTACTGATCCATCTGTAGCCTGGGAA...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp GAGTTAGTTAGTGAATACAATGGTATATTAGATACCAGCACTCCAAGCTACACCAAATTGTTCAATTCATaGGCCACACACTTAAGCGTA +
Preference number: 4 (lower is better)
Translates to: ELVSEYNGILDTSTPSYTKLFNS*ATHLSV
Trigger: TACGCTTAAGTGTGTGGCCCATGAATTGAACAATTT...GGTGTAGCTTGGAGTGCTGGTATCTAATATACCATTGTATTCACTAACTAACTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CCA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTGGTGAAGATTTGAGATaGACTAGCACAAAGTACATC +
Preference number: 4 (lower is better)
Translates to: VKLFNSWATHLSVLASTFGEDLR*TSTKYI
Trigger: GATGTACTTTGTGCTAGTCCATCTCAAATCTTCACC...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466387.5
3UTR CAA 72 bp CGACATAATATCACGGATATAGACTTCAAGGTTAAATaGTTCAATTCATGGGCCACACACTTAAGCGTATTG +
Preference number: 4 (lower is better)
Translates to: RHNITDIDFKVK*FNSWATHLSVL
Trigger: CAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAACCTTGAAGTCTATATCCGTGATATTATGTCG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR TCA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTTATCAATCGCAATGTTaGGAGGATCTCCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: VKLFNSWATHLSVLASTFYQSQC*EDLLFL
Trigger: AAGAAAAAGGAGATCCTCTCAACATTGCGATTGATA...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR TCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTCTGCAGATATTAAGCTaGTGGCAATACAAGGCAATT +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCLQILS*WQYKAI
Trigger: AATTGCCTTGTATTGCCATCAGCTTAATATCTGCAG...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000541047.5
CDS-3UTR GCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTTCATCTCATCTTACATaGAAACAGACACTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCSSHLT*KQTLFP
Trigger: AGGGAACAGTGTCTGTTTGCATGTAAGATGAGATGA...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CCA 90 bp GAAAAGAGTTACCCAATTCAACAGGTATCCTTTTTCAAGATGACAGTCAGCAATGAAGTCATGCTCCTTTaGTTATGTTTTGAGACTCAA +
Preference number: 4 (lower is better)
Translates to: EKSYPIQQVSFFKMTVSNEVMLL*LCFETQ
Trigger: TTGAGTCTCAAAACATAACCAAAGGAGCATGACTTC...ATTGCTGACTGTCATCTTGAAAAAGGATACCTGTTGAATTGGGTAACTCTTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409266.5
CDS-3UTR TCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTTATCAATCGCAATGTTaGGAGGATCTCCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCYQSQC*EDLLFL
Trigger: AAGAAAAAGGAGATCCTCTCAACATTGCGATTGATA...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTTGGCTAGTACATTTTTaGACTGAAACAGAAGCAATA +
Preference number: 4 (lower is better)
Translates to: VKLFNSWATHLSVLASTFWLVHF*TETEAI
Trigger: TATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCA...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR GCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTCTCTTTAAAACGGTTTaGAAGGTCTTGCTCATTTGT +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCLFKTV*KVLLIC
Trigger: ACAAATGAGCAAGACCTTGCAAACCGTTTTAAAGAG...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CCA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTAAATTGTTCAATTCATaGGCCACACACTTAAGCGTA +
Preference number: 4 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCKLFNS*ATHLSV
Trigger: TACGCTTAAGTGTGTGGCCCATGAATTGAACAATTT...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS GCA 90 bp CACAGAAGGGACTGGAGAGGCGGCGGCAGGGACAAGGGCAGCAGCTaGTGCAGCCGCCTCTGGCCGAGGTGCGGTGCCGCCTGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: HRRDWRGGGRDKGSS*CSRLWPRCGAACSA
Trigger: GGCAGAGCAGGCGGCACCGCACCTCGGCCAGAGGCGGCTGCAGCAGCTGCTGCCCTTGTCCCTGCCGCCGCCTCTCCAGTCCCTTCTGTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000451966.5
ENST00000496558.5
CDS TCA 90 bp CCGATGCCCGTGTGGCCCTTGGCTTCGTCAGTGGGCGAGGTAGCTTaGGCAGCATTGGAGATGCCGGCGATGGCCTCCTGGACTTGTTTG +
Preference number: 5 (lower is better)
Translates to: PMPVWPLASSVGEVA*AALEMPAMASWTCL
Trigger: CAAACAAGTCCAGGAGGCCATCGCCGGCATCTCCAATGCTGCTCAAGCTACCTCGCCCACTGACGAAGCCAAGGGCCACACGGGCATCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS GCA 90 bp CGCCCGTACCATGGTGCCGCGCTTTACCGACGAGCAAGGGTCATCTaGAAACTCGGAGGAGGCGATCCGCATCGTCTCACCTTGTTTGCG +
Preference number: 5 (lower is better)
Translates to: RPYHGAALYRRARVI*KLGGGDPHRLTLFA
Trigger: CGCAAACAAGGTGAGACGATGCGGATCGCCTCCTCCGAGTTTGCAGATGACCCTTGCTCGTCGGTAAAGCGCGGCACCATGGTACGGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CAA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTAGCCTGCCGCACGGCGTaGCACTCCGCCACGATCCTC +
Preference number: 5 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLACRTA*HSATIL
Trigger: GAGGATCGTGGCGGAGTGCAACGCCGTGCGGCAGGC...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CAA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTAATGCCCGTGTGGCCCTaGGCTTCGTCAGTGGGCGAG +
Preference number: 5 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLMPVWP*ASSVGE
Trigger: CTCGCCCACTGACGAAGCCAAGGGCCACACGGGCAT...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS TCA 90 bp CGGACCTGCTTCTCCCACTGGTCTTTGAAGACGTCCATGTTATCCTaGGCAACTTTGCTCTGTGGCCGGGCAGCCAGTGTCAGAGCGGCA +
Preference number: 5 (lower is better)
Translates to: RTCFSHWSLKTSMLS*ATLLCGRAASVRAA
Trigger: TGCCGCTCTGACACTGGCTGCCCGGCCACAGAGCAAAGTTGCTCAGGATAACATGGACGTCTTCAAAGACCAGTGGGAGAAGCAGGTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000409550.2
ENST00000465616.1
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS TCA 90 bp CGGTTGGCTCTCGTAGCGGCGACATCTGGGTGGCGGAGAAATGCTTaGGAGGCCGTGTACAGCATTGTGGCATTCTTCTTCAGAGCCCCT +
Preference number: 5 (lower is better)
Translates to: RLALVAATSGWRRNA*EAVYSIVAFFFRAP
Trigger: AGGGGCTCTGAAGAAGAATGCCACAATGCTGTACACGGCCTCTCAAGCATTTCTCCGCCACCCAGATGTCGCCGCTACGAGAGCCAACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS TCA 90 bp GTGCTAAGGCTGTGCTGCTGGGAGTGCCATCAAGGAGGGCCCATCTaGGTCAGAGCTGGAACAATGGAGAGGGGGTACTGTTGCAGAACC +
Preference number: 5 (lower is better)
Translates to: VLRLCCWECHQGGPI*VRAGTMERGYCCRT
Trigger: GGTTCTGCAACAGTACCCCCTCTCCATTGTTCCAGCTCTGACTCAGATGGGCCCTCCTTGATGGCACTCCCAGCAGCACAGCCTTAGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466387.5
CDS CCA 90 bp GGAATCACTGCTTCCACTCCCGATCGGAGCTCCCTCAGCACAGGTTaGGAGGTGGGTAGAAAGTTGACTAGCCCTGCCCCCATCTATGAC +
Preference number: 5 (lower is better)
Translates to: GITASTPDRSSLSTG*EVGRKLTSPAPIYD
Trigger: GTCATAGATGGGGGCAGGGCTAGTCAACTTTCTACCCACCTCCCAACCTGTGCTGAGGGAGCTCCGATCGGGAGTGGAAGCAGTGATTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361291.8
ENST00000402739.9
CDS CCA 90 bp GTGCTGCTGGGAGTGCCATCAAGGAGGGCCCATCTGAGTCAGAGCTaGAACAATGGAGAGGGGGTACTGTTGCAGAACCCATGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: VLLGVPSRRAHLSQS*NNGEGVLLQNPWSL
Trigger: CAAGGACCATGGGTTCTGCAACAGTACCCCCTCTCCATTGTTCCAGCTCTGACTCAGATGGGCCCTCCTTGATGGCACTCCCAGCAGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466387.5
CDS-3UTR CAA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTATGCCCGTGTGGCCCTaGGCTTCGTCAGTGGGCGAG +
Preference number: 5 (lower is better)
Translates to: ATLVQECPVSFPGYRWISMPVWP*ASSVGE
Trigger: CTCGCCCACTGACGAAGCCAAGGGCCACACGGGCAT...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS TCA 90 bp CCACGGCCTCTGTCAACACTCGGACCTGCTTCTCCCACTGGTCTTTaGAGACGTCCATGTTATCCTGAGCAACTTTGCTCTGTGGCCGGG +
Preference number: 5 (lower is better)
Translates to: PRPLSTLGPASPTGL*RRPCYPEQLCSVAG
Trigger: CCCGGCCACAGAGCAAAGTTGCTCAGGATAACATGGACGTCTTCAAAGACCAGTGGGAGAAGCAGGTCCGAGTGTTGACAGAGGCCGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000409550.2
ENST00000465616.1
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS GCA 90 bp CGTGTACAGCATTGTGGCATTCTTCTTCAGAGCCCCTCGGGCGGCTaGCATCTCATCCCGACAGTGAGGATCCTTCAGCTCCTGTTGTCT +
Preference number: 5 (lower is better)
Translates to: RVQHCGILLQSPSGG*HLIPTVRILQLLLS
Trigger: AGACAACAGGAGCTGAAGGATCCTCACTGTCGGGATGAGATGGCAGCCGCCCGAGGGGCTCTGAAGAAGAATGCCACAATGCTGTACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS CCA 90 bp GGGAGTGCCATCAAGGAGGGCCCATCTGAGTCAGAGCTGGAACAATaGAGAGGGGGTACTGTTGCAGAACCCATGGTCCTTGAAGGAGTG +
Preference number: 5 (lower is better)
Translates to: GSAIKEGPSESELEQ*RGGTVAEPMVLEGV
Trigger: CACTCCTTCAAGGACCATGGGTTCTGCAACAGTACCCCCTCTCCATTGTTCCAGCTCTGACTCAGATGGGCCCTCCTTGATGGCACTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466387.5
CDS-3UTR CAA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTGCCTGCCGCACGGCGTaGCACTCCGCCACGATCCTC +
Preference number: 5 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCACRTA*HSATIL
Trigger: GAGGATCGTGGCGGAGTGCAACGCCGTGCGGCAGGC...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS GCA 90 bp ATCTCGGTTGGCTCTCGTAGCGGCGACATCTGGGTGGCGGAGAAATaGTTGAGAGGCCGTGTACAGCATTGTGGCATTCTTCTTCAGAGC +
Preference number: 5 (lower is better)
Translates to: ISVGSRSGDIWVAEK*LRGRVQHCGILLQS
Trigger: GCTCTGAAGAAGAATGCCACAATGCTGTACACGGCCTCTCAAGCATTTCTCCGCCACCCAGATGTCGCCGCTACGAGAGCCAACCGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS CCA 90 bp CTGGTCTTTGAAGACGTCCATGTTATCCTGAGCAACTTTGCTCTGTaGCCGGGCAGCCAGTGTCAGAGCGGCATTGATGACCTGGGGACA +
Preference number: 5 (lower is better)
Translates to: LVFEDVHVILSNFAL*PGSQCQSGIDDLGT
Trigger: TGTCCCCAGGTCATCAATGCCGCTCTGACACTGGCTGCCCGGCCACAGAGCAAAGTTGCTCAGGATAACATGGACGTCTTCAAAGACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000409550.2
ENST00000465616.1
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTAAGTGGGCGAGGTAGCTaGAGCAGCATTGGAGATGCC +
Preference number: 5 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLSGRGS*SSIGDA
Trigger: GGCATCTCCAATGCTGCTCAAGCTACCTCGCCCACT...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTAGTGTCAGAGCGGCATaGATGACCTGGGGACACAGG +
Preference number: 5 (lower is better)
Translates to: ATLVQECPVSFPGYRWISSVRAA*MTWGHR
Trigger: CCTGTGTCCCCAGGTCATCAATGCCGCTCTGACACT...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTATGCCCGTGTGGCCCTaGGCTTCGTCAGTGGGCGAG +
Preference number: 5 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCMPVWP*ASSVGE
Trigger: CTCGCCCACTGACGAAGCCAAGGGCCACACGGGCAT...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTGGAGAGGGGGTACTGTaGCAGAACCCATGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: ATLVQECPVSFPGYRWISGEGVL*QNPWSL
Trigger: CAAGGACCATGGGTTCTGCAACAGTACCCCCTCTCC...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466387.5
CDS CCA 90 bp TTGTTTGAACACATAATCTCGGTTGGCTCTCGTAGCGGCGACATCTaGGTGGCGGAGAAATGCTTGAGAGGCCGTGTACAGCATTGTGGC +
Preference number: 5 (lower is better)
Translates to: LFEHIISVGSRSGDI*VAEKCLRGRVQHCG
Trigger: GCCACAATGCTGTACACGGCCTCTCAAGCATTTCTCCGCCACCCAGATGTCGCCGCTACGAGAGCCAACCGAGATTATGTGTTCAAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS CCA 90 bp TTGGAAAGTCAGGCTACTGGTCCCACAGACATGTTTAACCGCAGCTaGAGCCCAAGCAGGTCTCACATACACGAGTCGGCCAACCTTGTT +
Preference number: 5 (lower is better)
Translates to: LESQATGPTDMFNRS*SPSRSHIHESANLV
Trigger: AACAAGGTTGGCCGACTCGTGTATGTGAGACCTGCTTGGGCTCCAGCTGCGGTTAAACATGTCTGTGGGACCAGTAGCCTGACTTTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508970.1
CDS-3UTR CAA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTCCGCATCGTCTCACCTaGTTTGCGCACATCCTCTAC +
Preference number: 5 (lower is better)
Translates to: ATLVQECPVSFPGYRWISPHRLT*FAHILY
Trigger: GTAGAGGATGTGCGCAAACAAGGTGAGACGATGCGG...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS TCA 90 bp CCAAGATGTGATTTTCTGAGACAGAGAGGAAGTCATCCACTGAGGTaGTGTCATCCACGGCCTCTGTCAACACTCGGACCTGCTTCTCCC +
Preference number: 5 (lower is better)
Translates to: PRCDFLRQRGSHPLR*CHPRPLSTLGPASP
Trigger: GGGAGAAGCAGGTCCGAGTGTTGACAGAGGCCGTGGATGACATCACCTCAGTGGATGACTTCCTCTCTGTCTCAGAAAATCACATCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000409550.2
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS CCA 90 bp AGAATGCTGGTCTACACTCCTCCCTCTCCTCTGACCAAAGATAGGTaGAATGAAACGCTTCCTTTGACTAGCTCTGTGGGTCGGTGGGAG +
Preference number: 5 (lower is better)
Translates to: RMLVYTPPSPLTKDR*NETLPLTSSVGRWE
Trigger: CTCCCACCGACCCACAGAGCTAGTCAAAGGAAGCGTTTCATTCCACCTATCTTTGGTCAGAGGAGAGGGAGGAGTGTAGACCAGCATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451966.5
CDS CCA 90 bp TCCAGTCTTTTTGCCACACTGGATCTCACACCACCGGGACTTGGATaGCTTCCCAAACTAGGTGGGTTTGGAAAGCATTTCCCCTCTCCA +
Preference number: 5 (lower is better)
Translates to: SSLFATLDLTPPGLG*LPKLGGFGKHFPSP
Trigger: TGGAGAGGGGAAATGCTTTCCAAACCCACCTAGTTTGGGAAGCCATCCAAGTCCCGGTGGTGTGAGATCCAGTGTGGCAAAAAGACTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493024.5
ENST00000541047.5
CDS CCA 90 bp TCCTTCCAGTCTTTTTGCCACACTGGATCTCACACCACCGGGACTTaGATGGCTTCCCAAACTAGGTGGGTTTGGAAAGCATTTCCCCTC +
Preference number: 5 (lower is better)
Translates to: SFQSFCHTGSHTTGT*MASQTRWVWKAFPL
Trigger: GAGGGGAAATGCTTTCCAAACCCACCTAGTTTGGGAAGCCATCCAAGTCCCGGTGGTGTGAGATCCAGTGTGGCAAAAAGACTGGAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493024.5
ENST00000541047.5
CDS-3UTR CAA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTAGTGTCAGAGCGGCATaGATGACCTGGGGACACAGG +
Preference number: 5 (lower is better)
Translates to: HPSHSHKYCANANSVPNFSVRAA*MTWGHR
Trigger: CCTGTGTCCCCAGGTCATCAATGCCGCTCTGACACT...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTAAATGGCAACCTCTACTaGTTCAGCGAAGCGTGGCAT +
Preference number: 5 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLNGNLY*FSEAWH
Trigger: ATGCCACGCTTCGCTGAACAAGTAGAGGTTGCCATT...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTCCTGCTCAGCTATTTTaGCCTTCTCCTCCTGCGGTA +
Preference number: 5 (lower is better)
Translates to: ATLVQECPVSFPGYRWISPAQLF*PSPPAV
Trigger: TACCGCAGGAGGAGAAGGCAAAAATAGCTGAGCAGG...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS CCA 90 bp CATTCTCCTCAAACGGTTGAGGAACGTTGGCACTCAGGGCTTCAATaGCAACCTCTACTTGTTCAGCGAAGCGTGGCATCACTGTTTCAG +
Preference number: 5 (lower is better)
Translates to: HSPQTVEERWHSGLQ*QPLLVQRSVASLFQ
Trigger: CTGAAACAGTGATGCCACGCTTCGCTGAACAAGTAGAGGTTGCCATTGAAGCCCTGAGTGCCAACGTTCCTCAACCGTTTGAGGAGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTAGTGTCAGAGCGGCATaGATGACCTGGGGACACAGG +
Preference number: 5 (lower is better)
Translates to: FPHARGIRAGRYAYKNGISVRAA*MTWGHR
Trigger: CCTGTGTCCCCAGGTCATCAATGCCGCTCTGACACT...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTATTCTCCCACTGGTCTTaGAAGACGTCCATGTTATCC +
Preference number: 5 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLFSHWS*KTSMLS
Trigger: GGATAACATGGACGTCTTCAAAGACCAGTGGGAGAA...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTAAGGGCTATCACACACTaGTTCACATCCTCCAAGATG +
Preference number: 5 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLRAITH*FTSSKM
Trigger: CATCTTGGAGGATGTGAACAAGTGTGTGATAGCCCT...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTGTCCACATCGCCCTCTaGGAGGGCTATCACACACTT +
Preference number: 5 (lower is better)
Translates to: HPSHSHKYCANANSVPNFVHIAL*EGYHTL
Trigger: AAGTGTGTGATAGCCCTCCAAGAGGGCGATGTGGAC...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTAATGGCAACCTCTACTaGTTCAGCGAAGCGTGGCAT +
Preference number: 5 (lower is better)
Translates to: ATLVQECPVSFPGYRWISNGNLY*FSEAWH
Trigger: ATGCCACGCTTCGCTGAACAAGTAGAGGTTGCCATT...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTATTCTCCTCAAACGGTaGAGGAACGTTGGCACTCAG +
Preference number: 5 (lower is better)
Translates to: ATLVQECPVSFPGYRWISILLKR*RNVGTQ
Trigger: CTGAGTGCCAACGTTCCTCAACCGTTTGAGGAGAAT...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTCCTCAGTCTGAACACTaGTCCTGCTACGCACATCAT +
Preference number: 5 (lower is better)
Translates to: ATLVQECPVSFPGYRWISPQSEH*SCYAHH
Trigger: ATGATGTGCGTAGCAGGACAAGTGTTCAGACTGAGG...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTCCGCATCGTCTCACCTaGTTTGCGCACATCCTCTAC +
Preference number: 5 (lower is better)
Translates to: HPSHSHKYCANANSVPNFPHRLT*FAHILY
Trigger: GTAGAGGATGTGCGCAAACAAGGTGAGACGATGCGG...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CAA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTAGTGGGCGAGGTAGCTaGAGCAGCATTGGAGATGCC +
Preference number: 5 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCSGRGS*SSIGDA
Trigger: GGCATCTCCAATGCTGCTCAAGCTACCTCGCCCACT...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CAA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTAGTGGGCGAGGTAGCTaGAGCAGCATTGGAGATGCC +
Preference number: 5 (lower is better)
Translates to: FPHARGIRAGRYAYKNGISGRGS*SSIGDA
Trigger: GGCATCTCCAATGCTGCTCAAGCTACCTCGCCCACT...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTGCCTGCCGCACGGCGTaGCACTCCGCCACGATCCTC +
Preference number: 5 (lower is better)
Translates to: VKLFNSWATHLSVLASTFACRTA*HSATIL
Trigger: GAGGATCGTGGCGGAGTGCAACGCCGTGCGGCAGGC...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS CCA 90 bp CAGACTTTGCCTACTGACTGGAGTGGCCTTCTCCATCCATCCATCTaGTCAATTCGTCTTCCTTCCTCTACCTGGTCTTGCTCAATTAGC +
Preference number: 5 (lower is better)
Translates to: QTLPTDWSGLLHPSI*SIRLPSSTWSCSIS
Trigger: GCTAATTGAGCAAGACCAGGTAGAGGAAGGAAGACGAATTGACCAGATGGATGGATGGAGAAGGCCACTCCAGTCAGTAGGCAAAGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000540488.5
CDS-3UTR CAA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGAGTGTCAGAGCGGCATaGATGACCTGGGGACACAGG +
Preference number: 5 (lower is better)
Translates to: QCELCAQFYENVAKDSSVSVRAA*MTWGHR
Trigger: CCTGTGTCCCCAGGTCATCAATGCCGCTCTGACACT...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAAGTGTCAGAGCGGCATaGATGACCTGGGGACACAGG +
Preference number: 5 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTSVRAA*MTWGHR
Trigger: CCTGTGTCCCCAGGTCATCAATGCCGCTCTGACACT...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTTTCTCCCACTGGTCTTaGAAGACGTCCATGTTATCC +
Preference number: 5 (lower is better)
Translates to: ATLVQECPVSFPGYRWISFSHWS*KTSMLS
Trigger: GGATAACATGGACGTCTTCAAAGACCAGTGGGAGAA...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTGTCCACATCGCCCTCTaGGAGGGCTATCACACACTT +
Preference number: 5 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCVHIAL*EGYHTL
Trigger: AAGTGTGTGATAGCCCTCCAAGAGGGCGATGTGGAC...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTGTCCACATCGCCCTCTaGGAGGGCTATCACACACTT +
Preference number: 5 (lower is better)
Translates to: FPHARGIRAGRYAYKNGIVHIAL*EGYHTL
Trigger: AAGTGTGTGATAGCCCTCCAAGAGGGCGATGTGGAC...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTCCTGCTCAGCTATTTTaGCCTTCTCCTCCTGCGGTA +
Preference number: 5 (lower is better)
Translates to: HPSHSHKYCANANSVPNFPAQLF*PSPPAV
Trigger: TACCGCAGGAGGAGAAGGCAAAAATAGCTGAGCAGG...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTACAGCACGAGCTAATTaGTCCATTCGAGAACCTGCT +
Preference number: 5 (lower is better)
Translates to: ATLVQECPVSFPGYRWISTARAN*SIREPA
Trigger: AGCAGGTTCTCGAATGGACAAATTAGCTCGTGCTGT...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTAGATTGGTCACCGTATaGTGCTTCCAGTGCCCCCAG +
Preference number: 5 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCRLVTV*CFQCPQ
Trigger: CTGGGGGCACTGGAAGCACAATACGGTGACCAATCT...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATGAGGTGGGTAGAAAGTaGACTAGCCCTGCCCCCATC +
Preference number: 5 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNEVGRK*TSPAPI
Trigger: GATGGGGGCAGGGCTAGTCAACTTTCTACCCACCTC...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361291.8
ENST00000402739.9
CDS-3UTR CAA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTATTACCAGATGGGCCTTaGTTGCTTGTGTTGACAAGT +
Preference number: 5 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLLPDGP*LLVLTS
Trigger: ACTTGTCAACACAAGCAACAAAGGCCCATCTGGTAA...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CAA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGGCGGAGAAATGCTaGAGAGGCCGTGTACAGCAT +
Preference number: 5 (lower is better)
Translates to: RQCELCAQFYENVAKDSSVAEKC*RGRVQH
Trigger: ATGCTGTACACGGCCTCTCAAGCATTTCTCCGCCAC...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTGATGGCCTCCTGGACTaGTTTGAACACATAATCTCG +
Preference number: 5 (lower is better)
Translates to: ATLVQECPVSFPGYRWISDGLLD*FEHIIS
Trigger: CGAGATTATGTGTTCAAACAAGTCCAGGAGGCCATC...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS GCA 90 bp AAGTTGCCGAAGTCATGCTCCCTCGCAGAAGGTGAGCATAGGCTCTaGAATGGTTCTTCAATAATAGAGACAGATGACCTGTCGTCAGTG +
Preference number: 5 (lower is better)
Translates to: KLPKSCSLAEGEHRL*NGSSIIETDDLSSV
Trigger: CACTGACGACAGGTCATCTGTCTCTATTATTGAAGAACCATTGCAGAGCCTATGCTCACCTTCTGCGAGGGAGCATGACTTCGGCAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451966.5
CDS-3UTR CAA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTGCAACCTCTACCAGTTaGTTGGCATGCTCACGGAAA +
Preference number: 5 (lower is better)
Translates to: HPSHSHKYCANANSVPNFATSTS*LACSRK
Trigger: TTTCCGTGAGCATGCCAACAAACTGGTAGAGGTTGC...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGGTCCACATCGCCCTCTaGGAGGGCTATCACACACTT +
Preference number: 5 (lower is better)
Translates to: QCELCAQFYENVAKDSSVVHIAL*EGYHTL
Trigger: AAGTGTGTGATAGCCCTCCAAGAGGGCGATGTGGAC...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTATTCTCCATCTCAGCATaGATGATGTGTATGACTCGA +
Preference number: 5 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLFSISA*MMCMTR
Trigger: TCGAGTCATACACATCATCAATGCTGAGATGGAGAA...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTAATGGCAACCTCTACTaGTTCAGCGAAGCGTGGCAT +
Preference number: 5 (lower is better)
Translates to: HPSHSHKYCANANSVPNFNGNLY*FSEAWH
Trigger: ATGCCACGCTTCGCTGAACAAGTAGAGGTTGCCATT...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTCCTGCTCAGCTATTTTaGCCTTCTCCTCCTGCGGTA +
Preference number: 5 (lower is better)
Translates to: RQCELCAQFYENVAKDSSPAQLF*PSPPAV
Trigger: TACCGCAGGAGGAGAAGGCAAAAATAGCTGAGCAGG...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAAGATTGGTCACCGTATaGTGCTTCCAGTGCCCCCAG +
Preference number: 5 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTRLVTV*CFQCPQ
Trigger: CTGGGGGCACTGGAAGCACAATACGGTGACCAATCT...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTAGCTACACCTATGTATTaGCCTCTAACTTTCACACGT +
Preference number: 5 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLATPMY*PLTFTR
Trigger: ACGTGTGAAAGTTAGAGGCAAATACATAGGTGTAGC...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTCGGATTTCCAAACTTTaGGGGTCCCATTTCAGAATG +
Preference number: 5 (lower is better)
Translates to: ATLVQECPVSFPGYRWISRISKL*GSHFRM
Trigger: CATTCTGAAATGGGACCCCAAAAGTTTGGAAATCCG...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTTTACCAGATGGGCCTTaGTTGCTTGTGTTGACAAGT +
Preference number: 5 (lower is better)
Translates to: ATLVQECPVSFPGYRWISLPDGP*LLVLTS
Trigger: ACTTGTCAACACAAGCAACAAAGGCCCATCTGGTAA...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTCTCTTCTTTGAGATCTaGACTCTCCTTAGCGATCTG +
Preference number: 5 (lower is better)
Translates to: ATLVQECPVSFPGYRWISLFFEI*TLLSDL
Trigger: CAGATCGCTAAGGAGAGTCAAGATCTCAAAGAAGAG...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CAA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTATCGTCTCACCTTGTTaGCGCACATCCTCTACAGCA +
Preference number: 5 (lower is better)
Translates to: HPSHSHKYCANANSVPNFIVSPC*RTSSTA
Trigger: TGCTGTAGAGGATGTGCGCAAACAAGGTGAGACGAT...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CAA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATCCTGCTGTGGCTGGGTaGCTTCTGACGTTCATTCTG +
Preference number: 5 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNPAVAG*LLTFIL
Trigger: CAGAATGAACGTCAGAAGCAACCCAGCCACAGCAGG...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466387.5
CDS-3UTR CAA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTGCAACCTCTACCAGTTaGTTGGCATGCTCACGGAAA +
Preference number: 5 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCATSTS*LACSRK
Trigger: TTTCCGTGAGCATGCCAACAAACTGGTAGAGGTTGC...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACGTCCACATCGCCCTCTaGGAGGGCTATCACACACTT +
Preference number: 5 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHVHIAL*EGYHTL
Trigger: AAGTGTGTGATAGCCCTCCAAGAGGGCGATGTGGAC...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTAATGGCAACCTCTACTaGTTCAGCGAAGCGTGGCAT +
Preference number: 5 (lower is better)
Translates to: RQCELCAQFYENVAKDSSNGNLY*FSEAWH
Trigger: ATGCCACGCTTCGCTGAACAAGTAGAGGTTGCCATT...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTATTCTCCTCAAACGGTaGAGGAACGTTGGCACTCAG +
Preference number: 5 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCILLKR*RNVGTQ
Trigger: CTGAGTGCCAACGTTCCTCAACCGTTTGAGGAGAAT...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTATTCTCCTCAAACGGTaGAGGAACGTTGGCACTCAG +
Preference number: 5 (lower is better)
Translates to: RQCELCAQFYENVAKDSSILLKR*RNVGTQ
Trigger: CTGAGTGCCAACGTTCCTCAACCGTTTGAGGAGAAT...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTCCTCAGTCTGAACACTaGTCCTGCTACGCACATCAT +
Preference number: 5 (lower is better)
Translates to: FPHARGIRAGRYAYKNGIPQSEH*SCYAHH
Trigger: ATGATGTGCGTAGCAGGACAAGTGTTCAGACTGAGG...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCCTCAGTCTGAACACTaGTCCTGCTACGCACATCAT +
Preference number: 5 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCPQSEH*SCYAHH
Trigger: ATGATGTGCGTAGCAGGACAAGTGTTCAGACTGAGG...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACACCTGCTCAGCTATTTTaGCCTTCTCCTCCTGCGGTA +
Preference number: 5 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTPAQLF*PSPPAV
Trigger: TACCGCAGGAGGAGAAGGCAAAAATAGCTGAGCAGG...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTTCTAACTTTCACACGTaGTCAGTTTCCTTCCCTCTA +
Preference number: 5 (lower is better)
Translates to: ATLVQECPVSFPGYRWISSNFHT*SVSFPL
Trigger: TAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGA...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTGCTACACCTATGTATTaGCCTCTAACTTTCACACGT +
Preference number: 5 (lower is better)
Translates to: ATLVQECPVSFPGYRWISATPMY*PLTFTR
Trigger: ACGTGTGAAAGTTAGAGGCAAATACATAGGTGTAGC...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTATCGTCTCACCTTGTTaGCGCACATCCTCTACAGCA +
Preference number: 5 (lower is better)
Translates to: FPHARGIRAGRYAYKNGIIVSPC*RTSSTA
Trigger: TGCTGTAGAGGATGTGCGCAAACAAGGTGAGACGAT...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CAA 90 bp AGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTAACGGTTTGCAAGGTCTaGCTCATTTGTAGCATTTTT +
Preference number: 5 (lower is better)
Translates to: RTALCHLSTGMSCLLPRLTVCKV*LICSIF
Trigger: AAAAATGCTACAAATGAGCAAGACCTTGCAAACCGT...TAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CAA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTAGGCCGTGTACAGCATaGTGGCATTCTTCTTCAGAG +
Preference number: 5 (lower is better)
Translates to: FPHARGIRAGRYAYKNGIRPCTA*WHSSSE
Trigger: CTCTGAAGAAGAATGCCACAATGCTGTACACGGCCT...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CAA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACGTGGCGGAGAAATGCTaGAGAGGCCGTGTACAGCAT +
Preference number: 5 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHVAEKC*RGRVQH
Trigger: ATGCTGTACACGGCCTCTCAAGCATTTCTCCGCCAC...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
CDS-3UTR CAA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTATGCCCGTGTGGCCCTaGGCTTCGTCAGTGGGCGAG +
Preference number: 5 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCMPVWP*ASSVGE
Trigger: CTCGCCCACTGACGAAGCCAAGGGCCACACGGGCAT...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CAA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGGCAACCTCTACCAGTTaGTTGGCATGCTCACGGAAA +
Preference number: 5 (lower is better)
Translates to: QCELCAQFYENVAKDSSVATSTS*LACSRK
Trigger: TTTCCGTGAGCATGCCAACAAACTGGTAGAGGTTGC...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GAGTTAGTTAGTGAATACAATGGTATATTAGATACCAGCACTCCAAGCTACACCAGTGTCAGAGCGGCATaGATGACCTGGGGACACAGG +
Preference number: 5 (lower is better)
Translates to: ELVSEYNGILDTSTPSYTSVRAA*MTWGHR
Trigger: CCTGTGTCCCCAGGTCATCAATGCCGCTCTGACACT...GGTGTAGCTTGGAGTGCTGGTATCTAATATACCATTGTATTCACTAACTAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTTTCTCCCACTGGTCTTaGAAGACGTCCATGTTATCC +
Preference number: 5 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCFSHWS*KTSMLS
Trigger: GGATAACATGGACGTCTTCAAAGACCAGTGGGAGAA...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTTTCTCCCACTGGTCTTaGAAGACGTCCATGTTATCC +
Preference number: 5 (lower is better)
Translates to: RQCELCAQFYENVAKDSSFSHWS*KTSMLS
Trigger: GGATAACATGGACGTCTTCAAAGACCAGTGGGAGAA...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTAGGGCTATCACACACTaGTTCACATCCTCCAAGATG +
Preference number: 5 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCRAITH*FTSSKM
Trigger: CATCTTGGAGGATGTGAACAAGTGTGTGATAGCCCT...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTAGGGCTATCACACACTaGTTCACATCCTCCAAGATG +
Preference number: 5 (lower is better)
Translates to: RQCELCAQFYENVAKDSSRAITH*FTSSKM
Trigger: CATCTTGGAGGATGTGAACAAGTGTGTGATAGCCCT...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTAGGGCTATCACACACTaGTTCACATCCTCCAAGATG +
Preference number: 5 (lower is better)
Translates to: FPHARGIRAGRYAYKNGIRAITH*FTSSKM
Trigger: CATCTTGGAGGATGTGAACAAGTGTGTGATAGCCCT...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATAATGGCAACCTCTACTaGTTCAGCGAAGCGTGGCAT +
Preference number: 5 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNNGNLY*FSEAWH
Trigger: ATGCCACGCTTCGCTGAACAAGTAGAGGTTGCCATT...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATATTCTCCTCAAACGGTaGAGGAACGTTGGCACTCAG +
Preference number: 5 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNILLKR*RNVGTQ
Trigger: CTGAGTGCCAACGTTCCTCAACCGTTTGAGGAGAAT...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCTCAGTCTGAACACTaGTCCTGCTACGCACATCAT +
Preference number: 5 (lower is better)
Translates to: QCELCAQFYENVAKDSSVPQSEH*SCYAHH
Trigger: ATGATGTGCGTAGCAGGACAAGTGTTCAGACTGAGG...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACACCTCAGTCTGAACACTaGTCCTGCTACGCACATCAT +
Preference number: 5 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTPQSEH*SCYAHH
Trigger: ATGATGTGCGTAGCAGGACAAGTGTTCAGACTGAGG...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTCAGCTTGCTTTTCTCTaGATGGAATATCTCCACCTG +
Preference number: 5 (lower is better)
Translates to: HPSHSHKYCANANSVPNFQLAFL*MEYLHL
Trigger: CAGGTGGAGATATTCCATCAAGAGAAAAGCAAGCTG...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTTTTTTCAATGGGCCTTaGCCTCTTGTGAAGTCTGTC +
Preference number: 5 (lower is better)
Translates to: HPSHSHKYCANANSVPNFFFNGP*PLVKSV
Trigger: GACAGACTTCACAAGAGGCAAAGGCCCATTGAAAAA...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
47% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTACAGCACGAGCTAATTaGTCCATTCGAGAACCTGCT +
Preference number: 5 (lower is better)
Translates to: RQCELCAQFYENVAKDSSTARAN*SIREPA
Trigger: AGCAGGTTCTCGAATGGACAAATTAGCTCGTGCTGT...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTACAGCACGAGCTAATTaGTCCATTCGAGAACCTGCT +
Preference number: 5 (lower is better)
Translates to: FPHARGIRAGRYAYKNGITARAN*SIREPA
Trigger: AGCAGGTTCTCGAATGGACAAATTAGCTCGTGCTGT...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTGACTTCAAGGTTAAATaGTTCAATTCATGGGCCACA +
Preference number: 5 (lower is better)
Translates to: ATLVQECPVSFPGYRWISDFKVK*FNSWAT
Trigger: TGTGGCCCATGAATTGAACAATTTAACCTTGAAGTC...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GAGTTAGTTAGTGAATACAATGGTATATTAGATACCAGCACTCCAAGCTACACCGAGGTGGGTAGAAAGTaGACTAGCCCTGCCCCCATC +
Preference number: 5 (lower is better)
Translates to: ELVSEYNGILDTSTPSYTEVGRK*TSPAPI
Trigger: GATGGGGGCAGGGCTAGTCAACTTTCTACCCACCTC...GGTGTAGCTTGGAGTGCTGGTATCTAATATACCATTGTATTCACTAACTAACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361291.8
ENST00000402739.9
CDS-3UTR CAA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTCCAGATGGGCCTTTGTaGCTTGTGTTGACAAGTGTA +
Preference number: 5 (lower is better)
Translates to: FPHARGIRAGRYAYKNGIPDGPL*LVLTSV
Trigger: TACACTTGTCAACACAAGCAACAAAGGCCCATCTGG...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAATCGTCTCACCTTGTTaGCGCACATCCTCTACAGCA +
Preference number: 5 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTIVSPC*RTSSTA
Trigger: TGCTGTAGAGGATGTGCGCAAACAAGGTGAGACGAT...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CAA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATAGGCCGTGTACAGCATaGTGGCATTCTTCTTCAGAG +
Preference number: 5 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNRPCTA*WHSSSE
Trigger: CTCTGAAGAAGAATGCCACAATGCTGTACACGGCCT...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
CDS-3UTR CAA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGATGGCCTCCTGGACTaGTTTGAACACATAATCTCG +
Preference number: 5 (lower is better)
Translates to: RQCELCAQFYENVAKDSSDGLLD*FEHIIS
Trigger: CGAGATTATGTGTTCAAACAAGTCCAGGAGGCCATC...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CAA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTTTCCTTCCAGTCTTTTaGCCACACTGGATCTCACAC +
Preference number: 5 (lower is better)
Translates to: FPHARGIRAGRYAYKNGIFLPVF*PHWISH
Trigger: GTGTGAGATCCAGTGTGGCAAAAAGACTGGAAGGAA...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000541047.5
CDS-3UTR CAA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTAGTGTCAGAGCGGCATaGATGACCTGGGGACACAGG +
Preference number: 5 (lower is better)
Translates to: VKLFNSWATHLSVLASTFSVRAA*MTWGHR
Trigger: CCTGTGTCCCCAGGTCATCAATGCCGCTCTGACACT...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATAGGGCTATCACACACTaGTTCACATCCTCCAAGATG +
Preference number: 5 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNRAITH*FTSSKM
Trigger: CATCTTGGAGGATGTGAACAAGTGTGTGATAGCCCT...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp GAGTTAGTTAGTGAATACAATGGTATATTAGATACCAGCACTCCAAGCTACACCGTCCACATCGCCCTCTaGGAGGGCTATCACACACTT +
Preference number: 5 (lower is better)
Translates to: ELVSEYNGILDTSTPSYTVHIAL*EGYHTL
Trigger: AAGTGTGTGATAGCCCTCCAAGAGGGCGATGTGGAC...GGTGTAGCTTGGAGTGCTGGTATCTAATATACCATTGTATTCACTAACTAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACAATGGCAACCTCTACTaGTTCAGCGAAGCGTGGCAT +
Preference number: 5 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHNGNLY*FSEAWH
Trigger: ATGCCACGCTTCGCTGAACAAGTAGAGGTTGCCATT...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACATTCTCCTCAAACGGTaGAGGAACGTTGGCACTCAG +
Preference number: 5 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHILLKR*RNVGTQ
Trigger: CTGAGTGCCAACGTTCCTCAACCGTTTGAGGAGAAT...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACCCTCAGTCTGAACACTaGTCCTGCTACGCACATCAT +
Preference number: 5 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHPQSEH*SCYAHH
Trigger: ATGATGTGCGTAGCAGGACAAGTGTTCAGACTGAGG...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTTTTTTCAATGGGCCTTaGCCTCTTGTGAAGTCTGTC +
Preference number: 5 (lower is better)
Translates to: FPHARGIRAGRYAYKNGIFFNGP*PLVKSV
Trigger: GACAGACTTCACAAGAGGCAAAGGCCCATTGAAAAA...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
46% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTTTTTTCAATGGGCCTTaGCCTCTTGTGAAGTCTGTC +
Preference number: 5 (lower is better)
Translates to: RQCELCAQFYENVAKDSSFFNGP*PLVKSV
Trigger: GACAGACTTCACAAGAGGCAAAGGCCCATTGAAAAA...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGACAGCACGAGCTAATTaGTCCATTCGAGAACCTGCT +
Preference number: 5 (lower is better)
Translates to: QCELCAQFYENVAKDSSVTARAN*SIREPA
Trigger: AGCAGGTTCTCGAATGGACAAATTAGCTCGTGCTGT...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GCCACCTTAGTACAGGAATGTCCTGTCTCCTTCCCAGGCTACAGATGGATCAGTAAGGAATCCATTGCTTaGAATTCACTTAAAGCCTGT +
Preference number: 5 (lower is better)
Translates to: ATLVQECPVSFPGYRWISKESIA*NSLKAC
Trigger: ACAGGCTTTAAGTGAATTCAAAGCAATGGATTCCTT...ACTGATCCATCTGTAGCCTGGGAAGGAGACAGGACATTCCTGTACTAAGGTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGAGATTGGTCACCGTATaGTGCTTCCAGTGCCCCCAG +
Preference number: 5 (lower is better)
Translates to: PANLMILACIRVCFCRVKRLVTV*CFQCPQ
Trigger: CTGGGGGCACTGGAAGCACAATACGGTGACCAATCT...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp GAGTTAGTTAGTGAATACAATGGTATATTAGATACCAGCACTCCAAGCTACACCAGATTGGTCACCGTATaGTGCTTCCAGTGCCCCCAG +
Preference number: 5 (lower is better)
Translates to: ELVSEYNGILDTSTPSYTRLVTV*CFQCPQ
Trigger: CTGGGGGCACTGGAAGCACAATACGGTGACCAATCT...GGTGTAGCTTGGAGTGCTGGTATCTAATATACCATTGTATTCACTAACTAACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTTCTAACTTTCACACGTaGTCAGTTTCCTTCCCTCTA +
Preference number: 5 (lower is better)
Translates to: HPSHSHKYCANANSVPNFSNFHT*SVSFPL
Trigger: TAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGA...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTGCTACACCTATGTATTaGCCTCTAACTTTCACACGT +
Preference number: 5 (lower is better)
Translates to: HPSHSHKYCANANSVPNFATPMY*PLTFTR
Trigger: ACGTGTGAAAGTTAGAGGCAAATACATAGGTGTAGC...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTCGGATTTCCAAACTTTaGGGGTCCCATTTCAGAATG +
Preference number: 5 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCRISKL*GSHFRM
Trigger: CATTCTGAAATGGGACCCCAAAAGTTTGGAAATCCG...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CAA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCAGATGGGCCTTTGTaGCTTGTGTTGACAAGTGTA +
Preference number: 5 (lower is better)
Translates to: QCELCAQFYENVAKDSSVPDGPL*LVLTSV
Trigger: TACACTTGTCAACACAAGCAACAAAGGCCCATCTGG...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACACCAGATGGGCCTTTGTaGCTTGTGTTGACAAGTGTA +
Preference number: 5 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTPDGPL*LVLTSV
Trigger: TACACTTGTCAACACAAGCAACAAAGGCCCATCTGG...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CAA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTTTACCAGATGGGCCTTaGTTGCTTGTGTTGACAAGT +
Preference number: 5 (lower is better)
Translates to: FPHARGIRAGRYAYKNGILPDGP*LLVLTS
Trigger: ACTTGTCAACACAAGCAACAAAGGCCCATCTGGTAA...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CAA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACAGGCCGTGTACAGCATaGTGGCATTCTTCTTCAGAG +
Preference number: 5 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHRPCTA*WHSSSE
Trigger: CTCTGAAGAAGAATGCCACAATGCTGTACACGGCCT...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
CDS-3UTR CAA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTAGTGGGCGAGGTAGCTaGAGCAGCATTGGAGATGCC +
Preference number: 5 (lower is better)
Translates to: VKLFNSWATHLSVLASTFSGRGS*SSIGDA
Trigger: GGCATCTCCAATGCTGCTCAAGCTACCTCGCCCACT...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS GCA 90 bp TTGAGATGGACTAGCACAAAGTACATCTCACAAGCCTTTCAAAGCTaGTGTTACATAACCCTCAAGATTTCCCGAGGTGGAAAGAAGACC +
Preference number: 5 (lower is better)
Translates to: LRWTSTKYISQAFQS*CYITLKISRGGKKT
Trigger: GGTCTTCTTTCCACCTCGGGAAATCTTGAGGGTTATGTAACAGCAGCTTTGAAAGGCTTGTGAGATGTACTTTGTGCTAGTCCATCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466387.5
CDS-3UTR CAA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTGTCCACATCGCCCTCTaGGAGGGCTATCACACACTT +
Preference number: 5 (lower is better)
Translates to: VKLFNSWATHLSVLASTFVHIAL*EGYHTL
Trigger: AAGTGTGTGATAGCCCTCCAAGAGGGCGATGTGGAC...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTTTCTCCATCTCAGCATaGATGATGTGTATGACTCGA +
Preference number: 5 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCFSISA*MMCMTR
Trigger: TCGAGTCATACACATCATCAATGCTGAGATGGAGAA...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GAGTTAGTTAGTGAATACAATGGTATATTAGATACCAGCACTCCAAGCTACACCCCTGCTCAGCTATTTTaGCCTTCTCCTCCTGCGGTA +
Preference number: 5 (lower is better)
Translates to: ELVSEYNGILDTSTPSYTPAQLF*PSPPAV
Trigger: TACCGCAGGAGGAGAAGGCAAAAATAGCTGAGCAGG...GGTGTAGCTTGGAGTGCTGGTATCTAATATACCATTGTATTCACTAACTAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACACAGCTTGCTTTTCTCTaGATGGAATATCTCCACCTG +
Preference number: 5 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTQLAFL*MEYLHL
Trigger: CAGGTGGAGATATTCCATCAAGAGAAAAGCAAGCTG...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATCAGCTTGCTTTTCTCTaGATGGAATATCTCCACCTG +
Preference number: 5 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNQLAFL*MEYLHL
Trigger: CAGGTGGAGATATTCCATCAAGAGAAAAGCAAGCTG...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCAGCTTGCTTTTCTCTaGATGGAATATCTCCACCTG +
Preference number: 5 (lower is better)
Translates to: QCELCAQFYENVAKDSSVQLAFL*MEYLHL
Trigger: CAGGTGGAGATATTCCATCAAGAGAAAAGCAAGCTG...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGTTTTTCAATGGGCCTTaGCCTCTTGTGAAGTCTGTC +
Preference number: 5 (lower is better)
Translates to: QCELCAQFYENVAKDSSVFFNGP*PLVKSV
Trigger: GACAGACTTCACAAGAGGCAAAGGCCCATTGAAAAA...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTGCTTCGGCAATTTTCTaGGCAGCATTAATGACATCA +
Preference number: 5 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCASAIF*AALMTS
Trigger: TGATGTCATTAATGCTGCCAAGAAAATTGCCGAAGC...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTGACTTCAAGGTTAAATaGTTCAATTCATGGGCCACA +
Preference number: 5 (lower is better)
Translates to: HPSHSHKYCANANSVPNFDFKVK*FNSWAT
Trigger: TGTGGCCCATGAATTGAACAATTTAACCTTGAAGTC...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTTCTAACTTTCACACGTaGTCAGTTTCCTTCCCTCTA +
Preference number: 5 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCSNFHT*SVSFPL
Trigger: TAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGA...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTTCTAACTTTCACACGTaGTCAGTTTCCTTCCCTCTA +
Preference number: 5 (lower is better)
Translates to: FPHARGIRAGRYAYKNGISNFHT*SVSFPL
Trigger: TAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGA...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATCGGATTTCCAAACTTTaGGGGTCCCATTTCAGAATG +
Preference number: 5 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNRISKL*GSHFRM
Trigger: CATTCTGAAATGGGACCCCAAAAGTTTGGAAATCCG...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
CDS-3UTR CAA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCGGATTTCCAAACTTTaGGGGTCCCATTTCAGAATG +
Preference number: 5 (lower is better)
Translates to: QCELCAQFYENVAKDSSVRISKL*GSHFRM
Trigger: CATTCTGAAATGGGACCCCAAAAGTTTGGAAATCCG...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTCCGCATCGTCTCACCTaGTTTGCGCACATCCTCTAC +
Preference number: 5 (lower is better)
Translates to: VKLFNSWATHLSVLASTFPHRLT*FAHILY
Trigger: GTAGAGGATGTGCGCAAACAAGGTGAGACGATGCGG...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CAA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTACGGTTTGCAAGGTCTaGCTCATTTGTAGCATTTTT +
Preference number: 5 (lower is better)
Translates to: HPSHSHKYCANANSVPNFTVCKV*LICSIF
Trigger: AAAAATGCTACAAATGAGCAAGACCTTGCAAACCGT...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CAA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATATCCTTCAGCTCCTGTaGTCTTCTTGCTGCTACATA +
Preference number: 5 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNILQLL*SSCCYI
Trigger: TATGTAGCAGCAAGAAGACAACAGGAGCTGAAGGAT...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
CDS-3UTR CAA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTGTGGCGGAGAAATGCTaGAGAGGCCGTGTACAGCAT +
Preference number: 5 (lower is better)
Translates to: VKLFNSWATHLSVLASTFVAEKC*RGRVQH
Trigger: ATGCTGTACACGGCCTCTCAAGCATTTCTCCGCCAC...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS TCA 90 bp GCTTTGAATTCACTTAAAGCCTGTACAGGCGAAATGTGTTTCTTCTaGGAACCTCGTCGAACTCGTGTCTGGAATTCTTCAGGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: ALNSLKACTGEMCFF*EPRRTRVWNSSGFS
Trigger: AGAAAAGCCTGAAGAATTCCAGACACGAGTTCGACGAGGTTCTCAGAAGAAACACATTTCGCCTGTACAGGCTTTAAGTGAATTCAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS GCA 90 bp TTCACCATCTCTTTCCCAAACTCTTTAAAACGGTTTGCAAGGTCTTaGTCATTTGTAGCATTTTTGACAGCTTCCAGGGCCTCTTCCACA +
Preference number: 5 (lower is better)
Translates to: FTISFPNSLKRFARS*SFVAFLTASRASST
Trigger: TGTGGAAGAGGCCCTGGAAGCTGTCAAAAATGCTACAAATGAGCAAGACCTTGCAAACCGTTTTAAAGAGTTTGGGAAAGAGATGGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CAA 90 bp CATCCCTCCCACTCCCATAAATATTGCGCCAATGCGAACTCTGTGCCCAATTTTTTATCAATCGCAATGTaGAGAGGATCTCCTTTTTCT +
Preference number: 5 (lower is better)
Translates to: HPSHSHKYCANANSVPNFLSIAM*RGSPFS
Trigger: AGAAAAAGGAGATCCTCTCAACATTGCGATTGATAA...AAAATTGGGCACAGAGTTCGCATTGGCGCAATATTTATGGGAGTGGGAGGGATG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGGCAACCTCTACCAGTTaGTTGGCATGCTCACGGAAA +
Preference number: 5 (lower is better)
Translates to: PANLMILACIRVCFCRVKATSTS*LACSRK
Trigger: TTTCCGTGAGCATGCCAACAAACTGGTAGAGGTTGC...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATTTCTCCATCTCAGCATaGATGATGTGTATGACTCGA +
Preference number: 5 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNFSISA*MMCMTR
Trigger: TCGAGTCATACACATCATCAATGCTGAGATGGAGAA...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGTTCTCCATCTCAGCATaGATGATGTGTATGACTCGA +
Preference number: 5 (lower is better)
Translates to: QCELCAQFYENVAKDSSVFSISA*MMCMTR
Trigger: TCGAGTCATACACATCATCAATGCTGAGATGGAGAA...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GAGTTAGTTAGTGAATACAATGGTATATTAGATACCAGCACTCCAAGCTACACCAATGGCAACCTCTACTaGTTCAGCGAAGCGTGGCAT +
Preference number: 5 (lower is better)
Translates to: ELVSEYNGILDTSTPSYTNGNLY*FSEAWH
Trigger: ATGCCACGCTTCGCTGAACAAGTAGAGGTTGCCATT...GGTGTAGCTTGGAGTGCTGGTATCTAATATACCATTGTATTCACTAACTAACTC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp GAGTTAGTTAGTGAATACAATGGTATATTAGATACCAGCACTCCAAGCTACACCCCTCAGTCTGAACACTaGTCCTGCTACGCACATCAT +
Preference number: 5 (lower is better)
Translates to: ELVSEYNGILDTSTPSYTPQSEH*SCYAHH
Trigger: ATGATGTGCGTAGCAGGACAAGTGTTCAGACTGAGG...GGTGTAGCTTGGAGTGCTGGTATCTAATATACCATTGTATTCACTAACTAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTCCTGCTCAGCTATTTTaGCCTTCTCCTCCTGCGGTA +
Preference number: 5 (lower is better)
Translates to: VKLFNSWATHLSVLASTFPAQLF*PSPPAV
Trigger: TACCGCAGGAGGAGAAGGCAAAAATAGCTGAGCAGG...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTAGATTGGTCACCGTATaGTGCTTCCAGTGCCCCCAG +
Preference number: 5 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCRLVTV*CFQCPQ
Trigger: CTGGGGGCACTGGAAGCACAATACGGTGACCAATCT...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTAAAATGAAAGCAAGATaGGTCACCGTATTGTGCTTC +
Preference number: 5 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCKMKAR*VTVLCF
Trigger: GAAGCACAATACGGTGACCAATCTTGCTTTCATTTT...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGTCTAACTTTCACACGTaGTCAGTTTCCTTCCCTCTA +
Preference number: 5 (lower is better)
Translates to: QCELCAQFYENVAKDSSVSNFHT*SVSFPL
Trigger: TAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGA...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGGCTACACCTATGTATTaGCCTCTAACTTTCACACGT +
Preference number: 5 (lower is better)
Translates to: QCELCAQFYENVAKDSSVATPMY*PLTFTR
Trigger: ACGTGTGAAAGTTAGAGGCAAATACATAGGTGTAGC...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACCTCTTCTTTGAGATCTaGACTCTCCTTAGCGATCTG +
Preference number: 5 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHLFFEI*TLLSDL
Trigger: CAGATCGCTAAGGAGAGTCAAGATCTCAAAGAAGAG...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
CDS-3UTR CAA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTCCGCATCGTCTCACCTaGTTTGCGCACATCCTCTAC +
Preference number: 5 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCPHRLT*FAHILY
Trigger: GTAGAGGATGTGCGCAAACAAGGTGAGACGATGCGG...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CAA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACATCCTTCAGCTCCTGTaGTCTTCTTGCTGCTACATA +
Preference number: 5 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHILQLL*SSCCYI
Trigger: TATGTAGCAGCAAGAAGACAACAGGAGCTGAAGGAT...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
CDS-3UTR CAA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTTTATCAATCGCAATGTaGAGAGGATCTCCTTTTTCT +
Preference number: 5 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCLSIAM*RGSPFS
Trigger: AGAAAAAGGAGATCCTCTCAACATTGCGATTGATAA...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACTTCTCCATCTCAGCATaGATGATGTGTATGACTCGA +
Preference number: 5 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHFSISA*MMCMTR
Trigger: TCGAGTCATACACATCATCAATGCTGAGATGGAGAA...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp AATATCACGGATATAGACTTCAAGGTTAAATTGTTCAATTCATGGGCCACACACATTCTCCTCAAACGGTaGAGGAACGTTGGCACTCAG +
Preference number: 5 (lower is better)
Translates to: NITDIDFKVKLFNSWATHILLKR*RNVGTQ
Trigger: CTGAGTGCCAACGTTCCTCAACCGTTTGAGGAGAAT...GTGTGTGGCCCATGAATTGAACAATTTAACCTTGAAGTCTATATCCGTGATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTCCTGCTCAGCTATTTTaGCCTTCTCCTCCTGCGGTA +
Preference number: 5 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCPAQLF*PSPPAV
Trigger: TACCGCAGGAGGAGAAGGCAAAAATAGCTGAGCAGG...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACGCTTCGGCAATTTTCTaGGCAGCATTAATGACATCA +
Preference number: 5 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHASAIF*AALMTS
Trigger: TGATGTCATTAATGCTGCCAAGAAAATTGCCGAAGC...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGACAGCACGAGCTAATTaGTCCATTCGAGAACCTGCT +
Preference number: 5 (lower is better)
Translates to: PANLMILACIRVCFCRVKTARAN*SIREPA
Trigger: AGCAGGTTCTCGAATGGACAAATTAGCTCGTGCTGT...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp ATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAGGAATGTCCTGTAAGGAATCCATTGCTTaGAATTCACTTAAAGCCTGT +
Preference number: 5 (lower is better)
Translates to: MRMLQRTALCHLSTGMSCKESIA*NSLKAC
Trigger: ACAGGCTTTAAGTGAATTCAAAGCAATGGATTCCTT...ACAGGACATTCCTGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTAAGGAATCCATTGCTTaGAATTCACTTAAAGCCTGT +
Preference number: 5 (lower is better)
Translates to: RQCELCAQFYENVAKDSSKESIA*NSLKAC
Trigger: ACAGGCTTTAAGTGAATTCAAAGCAATGGATTCCTT...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp TTTCCCCATGCCAGAGGCATACGAGCTGGCAGGTATGCATACAAAAATGGAATTAAGGAATCCATTGCTTaGAATTCACTTAAAGCCTGT +
Preference number: 5 (lower is better)
Translates to: FPHARGIRAGRYAYKNGIKESIA*NSLKAC
Trigger: ACAGGCTTTAAGTGAATTCAAAGCAATGGATTCCTT...AATTCCATTTTTGTATGCATACCTGCCAGCTCGTATGCCTCTGGCATGGGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGGACTTCAAGGTTAAATaGTTCAATTCATGGGCCACA +
Preference number: 5 (lower is better)
Translates to: QCELCAQFYENVAKDSSVDFKVK*FNSWAT
Trigger: TGTGGCCCATGAATTGAACAATTTAACCTTGAAGTC...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp AAAGCAAGATTGGTCACCGTATTGTGCTTCCAGTGCCCCCAGAAGGATTTTAATGACTTCAAGGTTAAATaGTTCAATTCATGGGCCACA +
Preference number: 5 (lower is better)
Translates to: KARLVTVLCFQCPQKDFNDFKVK*FNSWAT
Trigger: TGTGGCCCATGAATTGAACAATTTAACCTTGAAGTC...ATTAAAATCCTTCTGGGGGCACTGGAAGCACAATACGGTGACCAATCTTGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGACGGTTTGCAAGGTCTaGCTCATTTGTAGCATTTTT +
Preference number: 5 (lower is better)
Translates to: QCELCAQFYENVAKDSSVTVCKV*LICSIF
Trigger: AAAAATGCTACAAATGAGCAAGACCTTGCAAACCGT...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CAA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGGATGGCCTCCTGGACTaGTTTGAACACATAATCTCG +
Preference number: 5 (lower is better)
Translates to: PANLMILACIRVCFCRVKDGLLD*FEHIIS
Trigger: CGAGATTATGTGTTCAAACAAGTCCAGGAGGCCATC...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CAA 90 bp CGCCAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTTCCAGGATAATCTTATaGTCAAACTCATTAAGAGCC +
Preference number: 5 (lower is better)
Translates to: RQCELCAQFYENVAKDSSSRIIL*SNSLRA
Trigger: GGCTCTTAATGAGTTTGACAATAAGATTATCCTGGA...AGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTGGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CAA 90 bp TACCCAATTCAACAGGTATCCTTTTTCAAGATGACAGTCAGCAATACAGATTTACTCAGGCATCACTTCTaGACCTGTTCAGTGTCACCC +
Preference number: 5 (lower is better)
Translates to: YPIQQVSFFKMTVSNTDLLRHHF*TCSVSP
Trigger: GGGTGACACTGAACAGGTCAAGAAGTGATGCCTGAG...TAAATCTGTATTGCTGACTGTCATCTTGAAAAAGGATACCTGTTGAATTGGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409266.5
CDS-3UTR CAA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGTTATCAATCGCAATGTaGAGAGGATCTCCTTTTTCT +
Preference number: 5 (lower is better)
Translates to: QCELCAQFYENVAKDSSVLSIAM*RGSPFS
Trigger: AGAAAAAGGAGATCCTCTCAACATTGCGATTGATAA...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTGCAACCTCTACCAGTTaGTTGGCATGCTCACGGAAA +
Preference number: 5 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCATSTS*LACSRK
Trigger: TTTCCGTGAGCATGCCAACAAACTGGTAGAGGTTGC...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTTTCTCCCACTGGTCTTaGAAGACGTCCATGTTATCC +
Preference number: 5 (lower is better)
Translates to: VKLFNSWATHLSVLASTFFSHWS*KTSMLS
Trigger: GGATAACATGGACGTCTTCAAAGACCAGTGGGAGAA...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTAGGGCTATCACACACTaGTTCACATCCTCCAAGATG +
Preference number: 5 (lower is better)
Translates to: VKLFNSWATHLSVLASTFRAITH*FTSSKM
Trigger: CATCTTGGAGGATGTGAACAAGTGTGTGATAGCCCT...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTATTCTCCTCAAACGGTaGAGGAACGTTGGCACTCAG +
Preference number: 5 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCILLKR*RNVGTQ
Trigger: CTGAGTGCCAACGTTCCTCAACCGTTTGAGGAGAAT...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GAGTTAGTTAGTGAATACAATGGTATATTAGATACCAGCACTCCAAGCTACACCCAGCTTGCTTTTCTCTaGATGGAATATCTCCACCTG +
Preference number: 5 (lower is better)
Translates to: ELVSEYNGILDTSTPSYTQLAFL*MEYLHL
Trigger: CAGGTGGAGATATTCCATCAAGAGAAAAGCAAGCTG...GGTGTAGCTTGGAGTGCTGGTATCTAATATACCATTGTATTCACTAACTAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp AATATCACGGATATAGACTTCAAGGTTAAATTGTTCAATTCATGGGCCACACACACAGCACGAGCTAATTaGTCCATTCGAGAACCTGCT +
Preference number: 5 (lower is better)
Translates to: NITDIDFKVKLFNSWATHTARAN*SIREPA
Trigger: AGCAGGTTCTCGAATGGACAAATTAGCTCGTGCTGT...GTGTGTGGCCCATGAATTGAACAATTTAACCTTGAAGTCTATATCCGTGATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACAAAGGAATCCATTGCTTaGAATTCACTTAAAGCCTGT +
Preference number: 5 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTKESIA*NSLKAC
Trigger: ACAGGCTTTAAGTGAATTCAAAGCAATGGATTCCTT...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp TTTGCCTCTAACTTTCACACGTTGTCAGTTTCCTTCCCTCTAATATTCCACCACAAAATGAAAGCAAGATaGGTCACCGTATTGTGCTTC +
Preference number: 5 (lower is better)
Translates to: FASNFHTLSVSFPLIFHHKMKAR*VTVLCF
Trigger: GAAGCACAATACGGTGACCAATCTTGCTTTCATTTT...GTGGTGGAATATTAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGAGGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTCCAGATGGGCCTTTGTaGCTTGTGTTGACAAGTGTA +
Preference number: 5 (lower is better)
Translates to: VKLFNSWATHLSVLASTFPDGPL*LVLTSV
Trigger: TACACTTGTCAACACAAGCAACAAAGGCCCATCTGG...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CAA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGATCCTTCAGCTCCTGTaGTCTTCTTGCTGCTACATA +
Preference number: 5 (lower is better)
Translates to: PANLMILACIRVCFCRVKILQLL*SSCCYI
Trigger: TATGTAGCAGCAAGAAGACAACAGGAGCTGAAGGAT...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTAGGCCGTGTACAGCATaGTGGCATTCTTCTTCAGAG +
Preference number: 5 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCRPCTA*WHSSSE
Trigger: CTCTGAAGAAGAATGCCACAATGCTGTACACGGCCT...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CAA 90 bp CAATGCGAACTCTGTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGTCCAGGATAATCTTATaGTCAAACTCATTAAGAGCC +
Preference number: 5 (lower is better)
Translates to: QCELCAQFYENVAKDSSVSRIIL*SNSLRA
Trigger: GGCTCTTAATGAGTTTGACAATAAGATTATCCTGGA...CACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCACAGAGTTCGCATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GTGCCCAATTTTATGAGAATGTTGCAAAGGACAGCTCTGTGCCACCTTAGTACATCCAGGATAATCTTATaGTCAAACTCATTAAGAGCC +
Preference number: 5 (lower is better)
Translates to: VPNFMRMLQRTALCHLSTSRIIL*SNSLRA
Trigger: GGCTCTTAATGAGTTTGACAATAAGATTATCCTGGA...TGTACTAAGGTGGCACAGAGCTGTCCTTTGCAACATTCTCATAAAATTGGGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS GCA 90 bp ATAGTTAAGTTTCACCATCTCTTTCCCAAACTCTTTAAAACGGTTTaGAAGGTCTTGCTCATTTGTAGCATTTTTGACAGCTTCCAGGGC +
Preference number: 5 (lower is better)
Translates to: IVKFHHLFPKLFKTV*KVLLICSIFDSFQG
Trigger: GCCCTGGAAGCTGTCAAAAATGCTACAAATGAGCAAGACCTTGCAAACCGTTTTAAAGAGTTTGGGAAAGAGATGGTGAAACTTAACTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS CCA 90 bp TTTTTCTTTTCAAAGATTTCACTTCACGTTGTAAATCAGGCAGCGTaGGGCAGCACTCTTTCTCTTCCTCAACTGAAGTTAGAATCAAGA +
Preference number: 5 (lower is better)
Translates to: FFFSKISLHVVNQAA*GSTLSLPQLKLESR
Trigger: TCTTGATTCTAACTTCAGTTGAGGAAGAGAAAGAGTGCTGCCCCACGCTGCCTGATTTACAACGTGAAGTGAAATCTTTGAAAAGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000496251.5
ENST00000497804.1
CDS-3UTR CAA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTCAGCTTGCTTTTCTCTaGATGGAATATCTCCACCTG +
Preference number: 5 (lower is better)
Translates to: VKLFNSWATHLSVLASTFQLAFL*MEYLHL
Trigger: CAGGTGGAGATATTCCATCAAGAGAAAAGCAAGCTG...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp AATATCACGGATATAGACTTCAAGGTTAAATTGTTCAATTCATGGGCCACACACTTTTTCAATGGGCCTTaGCCTCTTGTGAAGTCTGTC +
Preference number: 5 (lower is better)
Translates to: NITDIDFKVKLFNSWATHFFNGP*PLVKSV
Trigger: GACAGACTTCACAAGAGGCAAAGGCCCATTGAAAAA...GTGTGTGGCCCATGAATTGAACAATTTAACCTTGAAGTCTATATCCGTGATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTTTTTTCAATGGGCCTTaGCCTCTTGTGAAGTCTGTC +
Preference number: 5 (lower is better)
Translates to: VKLFNSWATHLSVLASTFFFNGP*PLVKSV
Trigger: GACAGACTTCACAAGAGGCAAAGGCCCATTGAAAAA...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
40% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGGCTTCGGCAATTTTCTaGGCAGCATTAATGACATCA +
Preference number: 5 (lower is better)
Translates to: PANLMILACIRVCFCRVKASAIF*AALMTS
Trigger: TGATGTCATTAATGCTGCCAAGAAAATTGCCGAAGC...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGGCTACACCTATGTATTaGCCTCTAACTTTCACACGT +
Preference number: 5 (lower is better)
Translates to: PANLMILACIRVCFCRVKATPMY*PLTFTR
Trigger: ACGTGTGAAAGTTAGAGGCAAATACATAGGTGTAGC...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp AAGAGTTACCCAATTCAACAGGTATCCTTTTTCAAGATGACAGTCAGCAATACACGGATTTCCAAACTTTaGGGGTCCCATTTCAGAATG +
Preference number: 5 (lower is better)
Translates to: KSYPIQQVSFFKMTVSNTRISKL*GSHFRM
Trigger: CATTCTGAAATGGGACCCCAAAAGTTTGGAAATCCG...TGTATTGCTGACTGTCATCTTGAAAAAGGATACCTGTTGAATTGGGTAACTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409266.5
CDS-3UTR CAA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTCTCTTCTTTGAGATCTaGACTCTCCTTAGCGATCTG +
Preference number: 5 (lower is better)
Translates to: VKLFNSWATHLSVLASTFLFFEI*TLLSDL
Trigger: CAGATCGCTAAGGAGAGTCAAGATCTCAAAGAAGAG...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTATCCTTCAGCTCCTGTaGTCTTCTTGCTGCTACATA +
Preference number: 5 (lower is better)
Translates to: VKLFNSWATHLSVLASTFILQLL*SSCCYI
Trigger: TATGTAGCAGCAAGAAGACAACAGGAGCTGAAGGAT...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS TCA 90 bp AGCTTTCTTGTTAAAACCTATCGTCCTAGAAGGAATCCATTGCTTTaGATTCACTTAAAGCCTGTACAGGCGAAATGTGTTTCTTCTGAG +
Preference number: 5 (lower is better)
Translates to: SFLVKTYRPRRNPLL*IHLKPVQAKCVSSE
Trigger: CTCAGAAGAAACACATTTCGCCTGTACAGGCTTTAAGTGAATTCAAAGCAATGGATTCCTTCTAGGACGATAGGTTTTAACAAGAAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTTTTTTCAATGGGCCTTaGCCTCTTGTGAAGTCTGTC +
Preference number: 5 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCFFNGP*PLVKSV
Trigger: GACAGACTTCACAAGAGGCAAAGGCCCATTGAAAAA...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTGCTTCGGCAATTTTCTaGGCAGCATTAATGACATCA +
Preference number: 5 (lower is better)
Translates to: VKLFNSWATHLSVLASTFASAIF*AALMTS
Trigger: TGATGTCATTAATGCTGCCAAGAAAATTGCCGAAGC...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGGACTTCAAGGTTAAATaGTTCAATTCATGGGCCACA +
Preference number: 5 (lower is better)
Translates to: PANLMILACIRVCFCRVKDFKVK*FNSWAT
Trigger: TGTGGCCCATGAATTGAACAATTTAACCTTGAAGTC...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GAGTTAGTTAGTGAATACAATGGTATATTAGATACCAGCACTCCAAGCTACACCAAAATGAAAGCAAGATaGGTCACCGTATTGTGCTTC +
Preference number: 5 (lower is better)
Translates to: ELVSEYNGILDTSTPSYTKMKAR*VTVLCF
Trigger: GAAGCACAATACGGTGACCAATCTTGCTTTCATTTT...GGTGTAGCTTGGAGTGCTGGTATCTAATATACCATTGTATTCACTAACTAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTGCTACACCTATGTATTaGCCTCTAACTTTCACACGT +
Preference number: 5 (lower is better)
Translates to: VKLFNSWATHLSVLASTFATPMY*PLTFTR
Trigger: ACGTGTGAAAGTTAGAGGCAAATACATAGGTGTAGC...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGACGGTTTGCAAGGTCTaGCTCATTTGTAGCATTTTT +
Preference number: 5 (lower is better)
Translates to: PANLMILACIRVCFCRVKTVCKV*LICSIF
Trigger: AAAAATGCTACAAATGAGCAAGACCTTGCAAACCGT...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS-3UTR CAA 90 bp AAGAGTTACCCAATTCAACAGGTATCCTTTTTCAAGATGACAGTCAGCAATACATCCTTTGGTTATGTTTaGAGACTCAACTCAGGCATC +
Preference number: 5 (lower is better)
Translates to: KSYPIQQVSFFKMTVSNTSFGYV*RLNSGI
Trigger: GATGCCTGAGTTGAGTCTCAAAACATAACCAAAGGA...TGTATTGCTGACTGTCATCTTGAAAAAGGATACCTGTTGAATTGGGTAACTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409266.5
CDS-3UTR CAA 90 bp CCTGCCAACCTAATGATTCTTGCATGCATTAGAGTTTGCTTTTGTAGAGTTAAGTTATCAATCGCAATGTaGAGAGGATCTCCTTTTTCT +
Preference number: 5 (lower is better)
Translates to: PANLMILACIRVCFCRVKLSIAM*RGSPFS
Trigger: AGAAAAAGGAGATCCTCTCAACATTGCGATTGATAA...CTTAACTCTACAAAAGCAAACTCTAATGCATGCAAGAATCATTAGGTTGGCAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTTTCTCCATCTCAGCATaGATGATGTGTATGACTCGA +
Preference number: 5 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCFSISA*MMCMTR
Trigger: TCGAGTCATACACATCATCAATGCTGAGATGGAGAA...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTGCTTCGGCAATTTTCTaGGCAGCATTAATGACATCA +
Preference number: 5 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCASAIF*AALMTS
Trigger: TGATGTCATTAATGCTGCCAAGAAAATTGCCGAAGC...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTGACTTCAAGGTTAAATaGTTCAATTCATGGGCCACA +
Preference number: 5 (lower is better)
Translates to: VKLFNSWATHLSVLASTFDFKVK*FNSWAT
Trigger: TGTGGCCCATGAATTGAACAATTTAACCTTGAAGTC...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTAAAATGAAAGCAAGATaGGTCACCGTATTGTGCTTC +
Preference number: 5 (lower is better)
Translates to: VKLFNSWATHLSVLASTFKMKAR*VTVLCF
Trigger: GAAGCACAATACGGTGACCAATCTTGCTTTCATTTT...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTTCTAACTTTCACACGTaGTCAGTTTCCTTCCCTCTA +
Preference number: 5 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCSNFHT*SVSFPL
Trigger: TAGAGGGAAGGAAACTGACAACGTGTGAAAGTTAGA...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp GTTAAATTGTTCAATTCATGGGCCACACACTTAAGCGTATTGGCTAGTACATTTTTATCAATCGCAATGTaGAGAGGATCTCCTTTTTCT +
Preference number: 5 (lower is better)
Translates to: VKLFNSWATHLSVLASTFLSIAM*RGSPFS
Trigger: AGAAAAAGGAGATCCTCTCAACATTGCGATTGATAA...AAATGTACTAGCCAATACGCTTAAGTGTGTGGCCCATGAATTGAACAATTTAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTGACTTCAAGGTTAAATaGTTCAATTCATGGGCCACA +
Preference number: 5 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCDFKVK*FNSWAT
Trigger: TGTGGCCCATGAATTGAACAATTTAACCTTGAAGTC...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS-3UTR CAA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTAAAATGAAAGCAAGATaGGTCACCGTATTGTGCTTC +
Preference number: 5 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCKMKAR*VTVLCF
Trigger: GAAGCACAATACGGTGACCAATCTTGCTTTCATTTT...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
CDS-3UTR CAA 90 bp GCGTATTGGCTAGTACATTTTTGCACTGAAACAGAAGCAATACAAGTTTTATGTAAGGAATCCATTGCTTaGAATTCACTTAAAGCCTGT +
Preference number: 5 (lower is better)
Translates to: AYWLVHFCTETEAIQVLCKESIA*NSLKAC
Trigger: ACAGGCTTTAAGTGAATTCAAAGCAATGGATTCCTT...ACATAAAACTTGTATTGCTTCTGTTTCAGTGCAAAAATGTACTAGCCAATACGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS GCA 72 bp CAGCAGCTGCTGCAGCCGCCTCTGGCCGAGGTGCGGTaGCGCCTGCTCTGCCCGCCCGCCTGGGTCTCCGCC +
Preference number: 6 (lower is better)
Translates to: QQLLQPPLAEVR*RLLCPPAWVSA
Trigger: GGCGGAGACCCAGGCGGGCGGGCAGAGCAGGCGGCACCGCACCTCGGCCAGAGGCGGCTGCAGCAGCTGCTG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496558.5
CDS CCA 72 bp GCCGAGGTGCGGTGCCGCCTGCTCTGCCCGCCCGCCTaGGTCTCCGCCTCACTCGGGGCTGGAAGCGAAGCC +
Preference number: 6 (lower is better)
Translates to: AEVRCRLLCPPA*VSASLGAGSEA
Trigger: GGCTTCGCTTCCAGCCCCGAGTGAGGCGGAGACCCAGGCGGGCGGGCAGAGCAGGCGGCACCGCACCTCGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496558.5
CDS TCA 72 bp GTGTGGCCCTTGGCTTCGTCAGTGGGCGAGGTAGCTTaGGCAGCATTGGAGATGCCGGCGATGGCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: VWPLASSVGEVA*AALEMPAMASW
Trigger: CCAGGAGGCCATCGCCGGCATCTCCAATGCTGCTCAAGCTACCTCGCCCACTGACGAAGCCAAGGGCCACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS CAA 72 bp CGTGTGGCCCTTGGCTTCGTCAGTGGGCGAGGTAGCTaGAGCAGCATTGGAGATGCCGGCGATGGCCTCCTG +
Preference number: 6 (lower is better)
Translates to: RVALGFVSGRGS*SSIGDAGDGLL
Trigger: CAGGAGGCCATCGCCGGCATCTCCAATGCTGCTCAAGCTACCTCGCCCACTGACGAAGCCAAGGGCCACACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS CAA 90 bp GCCGATGCCCGTGTGGCCCTTGGCTTCGTCAGTGGGCGAGGTAGCTaGAGCAGCATTGGAGATGCCGGCGATGGCCTCCTGGACTTGTTT +
Preference number: 6 (lower is better)
Translates to: ADARVALGFVSGRGS*SSIGDAGDGLLDLF
Trigger: AAACAAGTCCAGGAGGCCATCGCCGGCATCTCCAATGCTGCTCAAGCTACCTCGCCCACTGACGAAGCCAAGGGCCACACGGGCATCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS CCA 72 bp GCTTCCACTCCCGATCGGAGCTCCCTCAGCACAGGTTaGGAGGTGGGTAGAAAGTTGACTAGCCCTGCCCCC +
Preference number: 6 (lower is better)
Translates to: ASTPDRSSLSTG*EVGRKLTSPAP
Trigger: GGGGGCAGGGCTAGTCAACTTTCTACCCACCTCCCAACCTGTGCTGAGGGAGCTCCGATCGGGAGTGGAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361291.8
ENST00000402739.9
CDS GCA 72 bp CATGGTGCCGCGCTTTACCGACGAGCAAGGGTCATCTaGAAACTCGGAGGAGGCGATCCGCATCGTCTCACC +
Preference number: 6 (lower is better)
Translates to: HGAALYRRARVI*KLGGGDPHRLT
Trigger: GGTGAGACGATGCGGATCGCCTCCTCCGAGTTTGCAGATGACCCTTGCTCGTCGGTAAAGCGCGGCACCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS CCA 72 bp GGCGGAGAAATGCTTGAGAGGCCGTGTACAGCATTGTaGCATTCTTCTTCAGAGCCCCTCGGGCGGCTGCCA +
Preference number: 6 (lower is better)
Translates to: GGEMLERPCTAL*HSSSEPLGRLP
Trigger: TGGCAGCCGCCCGAGGGGCTCTGAAGAAGAATGCCACAATGCTGTACACGGCCTCTCAAGCATTTCTCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS CAA 72 bp GGTGGCGGAGAAATGCTTGAGAGGCCGTGTACAGCATaGTGGCATTCTTCTTCAGAGCCCCTCGGGCGGCTG +
Preference number: 6 (lower is better)
Translates to: GGGEMLERPCTA*WHSSSEPLGRL
Trigger: CAGCCGCCCGAGGGGCTCTGAAGAAGAATGCCACAATGCTGTACACGGCCTCTCAAGCATTTCTCCGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS CAA 90 bp CGACATCTGGGTGGCGGAGAAATGCTTGAGAGGCCGTGTACAGCATaGTGGCATTCTTCTTCAGAGCCCCTCGGGCGGCTGCCATCTCAT +
Preference number: 6 (lower is better)
Translates to: RHLGGGEMLERPCTA*WHSSSEPLGRLPSH
Trigger: ATGAGATGGCAGCCGCCCGAGGGGCTCTGAAGAAGAATGCCACAATGCTGTACACGGCCTCTCAAGCATTTCTCCGCCACCCAGATGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS CAA 90 bp TCGGTTGGCTCTCGTAGCGGCGACATCTGGGTGGCGGAGAAATGCTaGAGAGGCCGTGTACAGCATTGTGGCATTCTTCTTCAGAGCCCC +
Preference number: 6 (lower is better)
Translates to: SVGSRSGDIWVAEKC*RGRVQHCGILLQSP
Trigger: GGGGCTCTGAAGAAGAATGCCACAATGCTGTACACGGCCTCTCAAGCATTTCTCCGCCACCCAGATGTCGCCGCTACGAGAGCCAACCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS TCA 72 bp CTGTGCTGCTGGGAGTGCCATCAAGGAGGGCCCATCTaGGTCAGAGCTGGAACAATGGAGAGGGGGTACTGT +
Preference number: 6 (lower is better)
Translates to: LCCWECHQGGPI*VRAGTMERGYC
Trigger: ACAGTACCCCCTCTCCATTGTTCCAGCTCTGACTCAGATGGGCCCTCCTTGATGGCACTCCCAGCAGCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466387.5
CDS GCA 72 bp CATTGTGGCATTCTTCTTCAGAGCCCCTCGGGCGGCTaGCATCTCATCCCGACAGTGAGGATCCTTCAGCTC +
Preference number: 6 (lower is better)
Translates to: HCGILLQSPSGG*HLIPTVRILQL
Trigger: GAGCTGAAGGATCCTCACTGTCGGGATGAGATGGCAGCCGCCCGAGGGGCTCTGAAGAAGAATGCCACAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS CCA 72 bp CAGGCTACTGGTCCCACAGACATGTTTAACCGCAGCTaGAGCCCAAGCAGGTCTCACATACACGAGTCGGCC +
Preference number: 6 (lower is better)
Translates to: QATGPTDMFNRS*SPSRSHIHESA
Trigger: GGCCGACTCGTGTATGTGAGACCTGCTTGGGCTCCAGCTGCGGTTAAACATGTCTGTGGGACCAGTAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508970.1
CDS CCA 72 bp CACATAATCTCGGTTGGCTCTCGTAGCGGCGACATCTaGGTGGCGGAGAAATGCTTGAGAGGCCGTGTACAG +
Preference number: 6 (lower is better)
Translates to: HIISVGSRSGDI*VAEKCLRGRVQ
Trigger: CTGTACACGGCCTCTCAAGCATTTCTCCGCCACCCAGATGTCGCCGCTACGAGAGCCAACCGAGATTATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS CCA 72 bp GGAGTGCCATCAAGGAGGGCCCATCTGAGTCAGAGCTaGAACAATGGAGAGGGGGTACTGTTGCAGAACCCA +
Preference number: 6 (lower is better)
Translates to: GVPSRRAHLSQS*NNGEGVLLQNP
Trigger: TGGGTTCTGCAACAGTACCCCCTCTCCATTGTTCCAGCTCTGACTCAGATGGGCCCTCCTTGATGGCACTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466387.5
CDS CAA 90 bp GGTAGCTTGAGCAGCATTGGAGATGCCGGCGATGGCCTCCTGGACTaGTTTGAACACATAATCTCGGTTGGCTCTCGTAGCGGCGACATC +
Preference number: 6 (lower is better)
Translates to: GSLSSIGDAGDGLLD*FEHIISVGSRSGDI
Trigger: GATGTCGCCGCTACGAGAGCCAACCGAGATTATGTGTTCAAACAAGTCCAGGAGGCCATCGCCGGCATCTCCAATGCTGCTCAAGCTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS TCA 72 bp CTCGTAGCGGCGACATCTGGGTGGCGGAGAAATGCTTaGGAGGCCGTGTACAGCATTGTGGCATTCTTCTTC +
Preference number: 6 (lower is better)
Translates to: LVAATSGWRRNA*EAVYSIVAFFF
Trigger: GAAGAAGAATGCCACAATGCTGTACACGGCCTCTCAAGCATTTCTCCGCCACCCAGATGTCGCCGCTACGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS CCA 72 bp GCGGCATTGATGACCTGGGGACACAGGCTGTCAATCTaGGTGGCTGCCATCCGAACTAATTTCACCCCTTCT +
Preference number: 6 (lower is better)
Translates to: AALMTWGHRLSI*VAAIRTNFTPS
Trigger: AGAAGGGGTGAAATTAGTTCGGATGGCAGCCACCCAGATTGACAGCCTGTGTCCCCAGGTCATCAATGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000409550.2
ENST00000465616.1
ENST00000466387.5
ENST00000493024.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS CCA 72 bp GAAGACGTCCATGTTATCCTGAGCAACTTTGCTCTGTaGCCGGGCAGCCAGTGTCAGAGCGGCATTGATGAC +
Preference number: 6 (lower is better)
Translates to: EDVHVILSNFAL*PGSQCQSGIDD
Trigger: GTCATCAATGCCGCTCTGACACTGGCTGCCCGGCCACAGAGCAAAGTTGCTCAGGATAACATGGACGTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000409550.2
ENST00000465616.1
ENST00000466387.5
ENST00000493024.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS TCA 72 bp TTCTCCCACTGGTCTTTGAAGACGTCCATGTTATCCTaGGCAACTTTGCTCTGTGGCCGGGCAGCCAGTGTC +
Preference number: 6 (lower is better)
Translates to: FSHWSLKTSMLS*ATLLCGRAASV
Trigger: GACACTGGCTGCCCGGCCACAGAGCAAAGTTGCTCAGGATAACATGGACGTCTTCAAAGACCAGTGGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000409550.2
ENST00000465616.1
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS TCA 72 bp CCCGAACGCCATCATACACCAGGCGAGAGGCATCGATaGACTCATTCTCCTCAAACGGTTGAGGAACGTTGG +
Preference number: 6 (lower is better)
Translates to: PERHHTPGERHR*THSPQTVEERW
Trigger: CCAACGTTCCTCAACCGTTTGAGGAGAATGAGTTCATCGATGCCTCTCGCCTGGTGTATGATGGCGTTCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS TCA 72 bp GCTCCCTCAGCACAGGTTGGGAGGTGGGTAGAAAGTTaGCTAGCCCTGCCCCCATCTATGACATCACAATCT +
Preference number: 6 (lower is better)
Translates to: APSAQVGRWVES*LALPPSMTSQS
Trigger: AGATTGTGATGTCATAGATGGGGGCAGGGCTAGTCAACTTTCTACCCACCTCCCAACCTGTGCTGAGGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361291.8
ENST00000402739.9
CDS CCA 72 bp ATCAAGGAGGGCCCATCTGAGTCAGAGCTGGAACAATaGAGAGGGGGTACTGTTGCAGAACCCATGGTCCTT +
Preference number: 6 (lower is better)
Translates to: IKEGPSESELEQ*RGGTVAEPMVL
Trigger: AAGGACCATGGGTTCTGCAACAGTACCCCCTCTCCATTGTTCCAGCTCTGACTCAGATGGGCCCTCCTTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466387.5
CDS CAA 72 bp TCTCGTAGCGGCGACATCTGGGTGGCGGAGAAATGCTaGAGAGGCCGTGTACAGCATTGTGGCATTCTTCTT +
Preference number: 6 (lower is better)
Translates to: SRSGDIWVAEKC*RGRVQHCGILL
Trigger: AAGAAGAATGCCACAATGCTGTACACGGCCTCTCAAGCATTTCTCCGCCACCCAGATGTCGCCGCTACGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS CAA 72 bp AGCAGCATTGGAGATGCCGGCGATGGCCTCCTGGACTaGTTTGAACACATAATCTCGGTTGGCTCTCGTAGC +
Preference number: 6 (lower is better)
Translates to: SSIGDAGDGLLD*FEHIISVGSRS
Trigger: GCTACGAGAGCCAACCGAGATTATGTGTTCAAACAAGTCCAGGAGGCCATCGCCGGCATCTCCAATGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS GCA 72 bp GTGATGTCATCCACGGCCTCTGTCAACACTCGGACCTaGTTCTCCCACTGGTCTTTGAAGACGTCCATGTTA +
Preference number: 6 (lower is better)
Translates to: VMSSTASVNTRT*FSHWSLKTSML
Trigger: TAACATGGACGTCTTCAAAGACCAGTGGGAGAAGCAGGTCCGAGTGTTGACAGAGGCCGTGGATGACATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000409550.2
ENST00000465616.1
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS CCA 72 bp CAAACGGTTGAGGAACGTTGGCACTCAGGGCTTCAATaGCAACCTCTACTTGTTCAGCGAAGCGTGGCATCA +
Preference number: 6 (lower is better)
Translates to: QTVEERWHSGLQ*QPLLVQRSVAS
Trigger: TGATGCCACGCTTCGCTGAACAAGTAGAGGTTGCCATTGAAGCCCTGAGTGCCAACGTTCCTCAACCGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS CCA 72 bp CACACCACCGGGACTTGGATGGCTTCCCAAACTAGGTaGGTTTGGAAAGCATTTCCCCTCTCCACCTCAAAA +
Preference number: 6 (lower is better)
Translates to: HTTGTWMASQTR*VWKAFPLSTSK
Trigger: TTTTGAGGTGGAGAGGGGAAATGCTTTCCAAACCCACCTAGTTTGGGAAGCCATCCAAGTCCCGGTGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493024.5
ENST00000541047.5
CDS CAA 72 bp GATGACATTCATGGACAGTCTCCTGCTGTGGCTGGGTaGCTTCTGACGTTCATTCTGGACTCCAAGGACAGG +
Preference number: 6 (lower is better)
Translates to: DDIHGQSPAVAG*LLTFILDSKDR
Trigger: CCTGTCCTTGGAGTCCAGAATGAACGTCAGAAGCAACCCAGCCACAGCAGGAGACTGTCCATGAATGTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466387.5
CDS CAA 90 bp GTTCAGCCAGATGACATTCATGGACAGTCTCCTGCTGTGGCTGGGTaGCTTCTGACGTTCATTCTGGACTCCAAGGACAGGCTTCCATTG +
Preference number: 6 (lower is better)
Translates to: VQPDDIHGQSPAVAG*LLTFILDSKDRLPL
Trigger: CAATGGAAGCCTGTCCTTGGAGTCCAGAATGAACGTCAGAAGCAACCCAGCCACAGCAGGAGACTGTCCATGAATGTCATCTGGCTGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466387.5
CDS TCA 72 bp GATTTTCTGAGACAGAGAGGAAGTCATCCACTGAGGTaGTGTCATCCACGGCCTCTGTCAACACTCGGACCT +
Preference number: 6 (lower is better)
Translates to: DFLRQRGSHPLR*CHPRPLSTLGP
Trigger: AGGTCCGAGTGTTGACAGAGGCCGTGGATGACATCACCTCAGTGGATGACTTCCTCTCTGTCTCAGAAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000409550.2
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS CAA 72 bp GCTCTGAGAGCTCACTCAAGAAAGACCCACCAGATTTaGACTAGTGAGGGAATACTGCCAAGTGGCCTAGGG +
Preference number: 6 (lower is better)
Translates to: ALRAHSRKTHQI*TSEGILPSGLG
Trigger: CCCTAGGCCACTTGGCAGTATTCCCTCACTAGTCAAAATCTGGTGGGTCTTTCTTGAGTGAGCTCTCAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467488.1
CDS CAA 90 bp AGGAGGTCAGCTCTGAGAGCTCACTCAAGAAAGACCCACCAGATTTaGACTAGTGAGGGAATACTGCCAAGTGGCCTAGGGGAAAGCTTT +
Preference number: 6 (lower is better)
Translates to: RRSALRAHSRKTHQI*TSEGILPSGLGESF
Trigger: AAAGCTTTCCCCTAGGCCACTTGGCAGTATTCCCTCACTAGTCAAAATCTGGTGGGTCTTTCTTGAGTGAGCTCTCAGAGCTGACCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467488.1
CDS TCA 72 bp CTGTCAACACTCGGACCTGCTTCTCCCACTGGTCTTTaGAGACGTCCATGTTATCCTGAGCAACTTTGCTCT +
Preference number: 6 (lower is better)
Translates to: LSTLGPASPTGL*RRPCYPEQLCS
Trigger: AGAGCAAAGTTGCTCAGGATAACATGGACGTCTTCAAAGACCAGTGGGAGAAGCAGGTCCGAGTGTTGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000409550.2
ENST00000465616.1
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS TCA 72 bp TTCCAAACTTTTGGGGTCCCATTTCAGAATGATAGGTaGAGTTGCCGAAGTCATGCTCCCTCTGTGGGTCGG +
Preference number: 6 (lower is better)
Translates to: FQTFGVPFQNDR*SCRSHAPSVGR
Trigger: CCGACCCACAGAGGGAGCATGACTTCGGCAACTTCACCTATCATTCTGAAATGGGACCCCAAAAGTTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402739.9
ENST00000496558.5
ENST00000629316.2
CDS TCA 72 bp GCATCTAAATCCAGAGGTGCTTTAGGTTCAGCCAGATaGCATTCATGGACAGTCTCCTGCTGTGGCTGGGTT +
Preference number: 6 (lower is better)
Translates to: ASKSRGALGSAR*HSWTVSCCGWV
Trigger: AACCCAGCCACAGCAGGAGACTGTCCATGAATGTCATCTGGCTGAACCTAAAGCACCTCTGGATTTAGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466387.5
CDS CCA 72 bp GTCTACACTCCTCCCTCTCCTCTGACCAAAGATAGGTaGAATGAAACGCTTCCTTTGACTAGCTCTGTGGGT +
Preference number: 6 (lower is better)
Translates to: VYTPPSPLTKDR*NETLPLTSSVG
Trigger: ACCCACAGAGCTAGTCAAAGGAAGCGTTTCATTCCACCTATCTTTGGTCAGAGGAGAGGGAGGAGTGTAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451966.5
CDS CAA 72 bp AACGTTGGCACTCAGGGCTTCAATGGCAACCTCTACTaGTTCAGCGAAGCGTGGCATCACTGTTTCAGAAAG +
Preference number: 6 (lower is better)
Translates to: NVGTQGFNGNLY*FSEAWHHCFRK
Trigger: CTTTCTGAAACAGTGATGCCACGCTTCGCTGAACAAGTAGAGGTTGCCATTGAAGCCCTGAGTGCCAACGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS CAA 90 bp CGGTTGAGGAACGTTGGCACTCAGGGCTTCAATGGCAACCTCTACTaGTTCAGCGAAGCGTGGCATCACTGTTTCAGAAAGCAATTTTGT +
Preference number: 6 (lower is better)
Translates to: RLRNVGTQGFNGNLY*FSEAWHHCFRKQFC
Trigger: ACAAAATTGCTTTCTGAAACAGTGATGCCACGCTTCGCTGAACAAGTAGAGGTTGCCATTGAAGCCCTGAGTGCCAACGTTCCTCAACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS TCA 72 bp TTCCAAACTTTTGGGGTCCCATTTCAGAATGATAGGTaGAGTTGCCGAAGTCATGCTCCCTCGCAGAAGGTG +
Preference number: 6 (lower is better)
Translates to: FQTFGVPFQNDR*SCRSHAPSQKV
Trigger: CACCTTCTGCGAGGGAGCATGACTTCGGCAACTTCACCTATCATTCTGAAATGGGACCCCAAAAGTTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451966.5
CDS CAA 90 bp TCTGAGTGGCTTGCTCTACAGAGGCAGCTAGTACATGGGCTTTCTTaGACCTCCCTTTCTTTTTACCAGATGGGCCTTTGTTGCTTGTGT +
Preference number: 6 (lower is better)
Translates to: SEWLALQRQLVHGLS*TSLSFYQMGLCCLC
Trigger: ACACAAGCAACAAAGGCCCATCTGGTAAAAAGAAAGGGAGGTCAAAGAAAGCCCATGTACTAGCTGCCTCTGTAGAGCAAGCCACTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000402739.9
ENST00000409971.6
ENST00000466387.5
ENST00000496558.5
ENST00000508970.1
ENST00000629316.2
CDS CAA 90 bp ACGGAGCAGCATAAAGCAAGCCTATCTGCAGACTCAGATGACCCCTaGTATGAGTTTGAGCTCTGTCTTCAAACCCAGGAAATCCTCAGA +
Preference number: 6 (lower is better)
Translates to: TEQHKASLSADSDDP*YEFELCLQTQEILR
Trigger: TCTGAGGATTTCCTGGGTTTGAAGACAGAGCTCAAACTCATACAAGGGGTCATCTGAGTCTGCAGATAGGCTTGCTTTATGCTGCTCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496251.5
ENST00000497804.1
CDS TCA 72 bp TTCCAAACTTTTGGGGTCCCATTTCAGAATGATAGGTaGAGTTGCCGAAGTCATGCTCCCAGTGCTAAGGCT +
Preference number: 6 (lower is better)
Translates to: FQTFGVPFQNDR*SCRSHAPSAKA
Trigger: AGCCTTAGCACTGGGAGCATGACTTCGGCAACTTCACCTATCATTCTGAAATGGGACCCCAAAAGTTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466387.5
CDS GCA 72 bp AAGTCATGCTCCCTCGCAGAAGGTGAGCATAGGCTCTaGAATGGTTCTTCAATAATAGAGACAGATGACCTG +
Preference number: 6 (lower is better)
Translates to: KSCSLAEGEHRL*NGSSIIETDDL
Trigger: CAGGTCATCTGTCTCTATTATTGAAGAACCATTGCAGAGCCTATGCTCACCTTCTGCGAGGGAGCATGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451966.5
CDS CAA 72 bp AGCCTTTCCACTGTTAGCGTCCGGATTTCCAAACTTTaGGGGTCCCATTTCAGAATGATAGGTGAAGTTGCC +
Preference number: 6 (lower is better)
Translates to: SLSTVSVRISKL*GSHFRMIGEVA
Trigger: GGCAACTTCACCTATCATTCTGAAATGGGACCCCAAAAGTTTGGAAATCCGGACGCTAACAGTGGAAAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402739.9
ENST00000409266.5
ENST00000409971.6
ENST00000451966.5
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS CAA 72 bp CTTGCTCTACAGAGGCAGCTAGTACATGGGCTTTCTTaGACCTCCCTTTCTTTTTACCAGATGGGCCTTTGT +
Preference number: 6 (lower is better)
Translates to: LALQRQLVHGLS*TSLSFYQMGLC
Trigger: ACAAAGGCCCATCTGGTAAAAAGAAAGGGAGGTCAAAGAAAGCCCATGTACTAGCTGCCTCTGTAGAGCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000402739.9
ENST00000409971.6
ENST00000451966.5
ENST00000466387.5
ENST00000496558.5
ENST00000508970.1
ENST00000629316.2
CDS CAA 72 bp GCCTATCTGCAGACTCAGATGACCCCTTGTATGAGTTaGAGCTCTGTCTTCAAACCCAGGAAATCCTCAGAT +
Preference number: 6 (lower is better)
Translates to: AYLQTQMTPCMS*SSVFKPRKSSD
Trigger: ATCTGAGGATTTCCTGGGTTTGAAGACAGAGCTCAAACTCATACAAGGGGTCATCTGAGTCTGCAGATAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496251.5
ENST00000497804.1
CDS CAA 72 bp CATAAAGCAAGCCTATCTGCAGACTCAGATGACCCCTaGTATGAGTTTGAGCTCTGTCTTCAAACCCAGGAA +
Preference number: 6 (lower is better)
Translates to: HKASLSADSDDP*YEFELCLQTQE
Trigger: TTCCTGGGTTTGAAGACAGAGCTCAAACTCATACAAGGGGTCATCTGAGTCTGCAGATAGGCTTGCTTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496251.5
ENST00000497804.1
CDS CAA 90 bp AGTGGGTGGGGCTCTCTTCTTCTTTGCCTCTTATCTTCCTGCTTCTaGCTTTTTCCAGGATTCTCTTCTCCTATGCCTCATAAGATAAAG +
Preference number: 6 (lower is better)
Translates to: SGWGSLLLCLLSSCF*LFPGFSSPMPHKIK
Trigger: CTTTATCTTATGAGGCATAGGAGAAGAGAATCCTGGAAAAAGCAAGAAGCAGGAAGATAAGAGGCAAAGAAGAAGAGAGCCCCACCCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467488.1
CDS CAA 90 bp ATAAAGCAAGCCTATCTGCAGACTCAGATGACCCCTTGTATGAGTTaGAGCTCTGTCTTCAAACCCAGGAAATCCTCAGATAAGAGCTTG +
Preference number: 6 (lower is better)
Translates to: IKQAYLQTQMTPCMS*SSVFKPRKSSDKSL
Trigger: CAAGCTCTTATCTGAGGATTTCCTGGGTTTGAAGACAGAGCTCAAACTCATACAAGGGGTCATCTGAGTCTGCAGATAGGCTTGCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496251.5
ENST00000497804.1
CDS TCA 72 bp TCACTTAAAGCCTGTACAGGCGAAATGTGTTTCTTCTaGGAACCTCGTCGAACTCGTGTCTGGAATTCTTCA +
Preference number: 6 (lower is better)
Translates to: SLKACTGEMCFF*EPRRTRVWNSS
Trigger: TGAAGAATTCCAGACACGAGTTCGACGAGGTTCTCAGAAGAAACACATTTCGCCTGTACAGGCTTTAAGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS GCA 72 bp ACTAGCACAAAGTACATCTCACAAGCCTTTCAAAGCTaGTGTTACATAACCCTCAAGATTTCCCGAGGTGGA +
Preference number: 6 (lower is better)
Translates to: TSTKYISQAFQS*CYITLKISRGG
Trigger: TCCACCTCGGGAAATCTTGAGGGTTATGTAACAGCAGCTTTGAAAGGCTTGTGAGATGTACTTTGTGCTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466387.5
CDS CCA 72 bp TCAAAGATTTCACTTCACGTTGTAAATCAGGCAGCGTaGGGCAGCACTCTTTCTCTTCCTCAACTGAAGTTA +
Preference number: 6 (lower is better)
Translates to: SKISLHVVNQAA*GSTLSLPQLKL
Trigger: TAACTTCAGTTGAGGAAGAGAAAGAGTGCTGCCCCACGCTGCCTGATTTACAACGTGAAGTGAAATCTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000496251.5
ENST00000497804.1
CDS CAA 72 bp TGGTTATGTTTTGAGACTCAACTCAGGCATCACTTCTaGACCTGTTCAGTGTCACCCTCGATCTTAAGAGGA +
Preference number: 6 (lower is better)
Translates to: WLCFETQLRHHF*TCSVSPSILRG
Trigger: TCCTCTTAAGATCGAGGGTGACACTGAACAGGTCAAGAAGTGATGCCTGAGTTGAGTCTCAAAACATAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409266.5
CDS CAA 72 bp GGCTCTCTTCTTCTTTGCCTCTTATCTTCCTGCTTCTaGCTTTTTCCAGGATTCTCTTCTCCTATGCCTCAT +
Preference number: 6 (lower is better)
Translates to: GSLLLCLLSSCF*LFPGFSSPMPH
Trigger: ATGAGGCATAGGAGAAGAGAATCCTGGAAAAAGCAAGAAGCAGGAAGATAAGAGGCAAAGAAGAAGAGAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467488.1
CDS CAA 90 bp TTTCACCATCTCTTTCCCAAACTCTTTAAAACGGTTTGCAAGGTCTaGCTCATTTGTAGCATTTTTGACAGCTTCCAGGGCCTCTTCCAC +
Preference number: 6 (lower is better)
Translates to: FHHLFPKLFKTVCKV*LICSIFDSFQGLFH
Trigger: GTGGAAGAGGCCCTGGAAGCTGTCAAAAATGCTACAAATGAGCAAGACCTTGCAAACCGTTTTAAAGAGTTTGGGAAAGAGATGGTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS CAA 90 bp ATGCTCCTTTGGTTATGTTTTGAGACTCAACTCAGGCATCACTTCTaGACCTGTTCAGTGTCACCCTCGATCTTAAGAGGACATAATGCT +
Preference number: 6 (lower is better)
Translates to: MLLWLCFETQLRHHF*TCSVSPSILRGHNA
Trigger: AGCATTATGTCCTCTTAAGATCGAGGGTGACACTGAACAGGTCAAGAAGTGATGCCTGAGTTGAGTCTCAAAACATAACCAAAGGAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409266.5
CDS CAA 90 bp TGGGCTTTCTTTGACCTCCCTTTCTTTTTACCAGATGGGCCTTTGTaGCTTGTGTTGACAAGTGTAGTCACCTTCTTATTGGTTGTTCCT +
Preference number: 6 (lower is better)
Translates to: WAFFDLPFFLPDGPL*LVLTSVVTFLLVVP
Trigger: AGGAACAACCAATAAGAAGGTGACTACACTTGTCAACACAAGCAACAAAGGCCCATCTGGTAAAAAGAAAGGGAGGTCAAAGAAAGCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508970.1
CDS TCA 72 bp TTCCAAACTTTTGGGGTCCCATTTCAGAATGATAGGTaGAGTTGCCGAAGTCATGCTCCGTTACTATGGAAA +
Preference number: 6 (lower is better)
Translates to: FQTFGVPFQNDR*SCRSHAPLLWK
Trigger: TTTCCATAGTAACGGAGCATGACTTCGGCAACTTCACCTATCATTCTGAAATGGGACCCCAAAAGTTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409971.6
CDS GCA 72 bp TCTTTCCCAAACTCTTTAAAACGGTTTGCAAGGTCTTaGTCATTTGTAGCATTTTTGACAGCTTCCAGGGCC +
Preference number: 6 (lower is better)
Translates to: SFPNSLKRFARS*SFVAFLTASRA
Trigger: GGCCCTGGAAGCTGTCAAAAATGCTACAAATGAGCAAGACCTTGCAAACCGTTTTAAAGAGTTTGGGAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS GCA 72 bp GCTCTCTTCTTCTTTGCCTCTTATCTTCCTGCTTCTTaGTTTTTCCAGGATTCTCTTCTCCTATGCCTCATA +
Preference number: 6 (lower is better)
Translates to: ALFFFASYLPAS*FFQDSLLLCLI
Trigger: TATGAGGCATAGGAGAAGAGAATCCTGGAAAAAGCAAGAAGCAGGAAGATAAGAGGCAAAGAAGAAGAGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467488.1
CDS CCA 72 bp ATAACAATATGGACCTCTCAGTCTTTTCTCTATAAATaGCACCCTCCCTATTCCTGTCGGTGTCCTTTGCTT +
Preference number: 6 (lower is better)
Translates to: ITIWTSQSFLYK*HPPYSCRCPLL
Trigger: AAGCAAAGGACACCGACAGGAATAGGGAGGGTGCCATTTATAGAGAAAAGACTGAGAGGTCCATATTGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496251.5
ENST00000497804.1
CDS CAA 72 bp AAACGGTTTGCAAGGTCTTGCTCATTTGTAGCATTTTaGACAGCTTCCAGGGCCTCTTCCACAATTTTCAGA +
Preference number: 6 (lower is better)
Translates to: KRFARSCSFVAF*TASRASSTIFR
Trigger: TCTGAAAATTGTGGAAGAGGCCCTGGAAGCTGTCAAAAATGCTACAAATGAGCAAGACCTTGCAAACCGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS CAA 72 bp CTCTTTCCCAAACTCTTTAAAACGGTTTGCAAGGTCTaGCTCATTTGTAGCATTTTTGACAGCTTCCAGGGC +
Preference number: 6 (lower is better)
Translates to: LFPKLFKTVCKV*LICSIFDSFQG
Trigger: GCCCTGGAAGCTGTCAAAAATGCTACAAATGAGCAAGACCTTGCAAACCGTTTTAAAGAGTTTGGGAAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000629316.2
CDS CAA 72 bp GTGTTTTTAGCAGTACTGTTGCCAAGAATGTTTGCCTaGGAAGTGCAACGGTGGGAACTTTACATTGTGAAG +
Preference number: 6 (lower is better)
Translates to: VFLAVLLPRMFA*EVQRWELYIVK
Trigger: CTTCACAATGTAAAGTTCCCACCGTTGCACTTCCAAGGCAAACATTCTTGGCAACAGTACTGCTAAAAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467892.1
CDS TCA 72 bp TTCCAAACTTTTGGGGTCCCATTTCAGAATGATAGGTaGAGTTGCCGAAGTCATGCTCCTTTGGTTATGTTT +
Preference number: 6 (lower is better)
Translates to: FQTFGVPFQNDR*SCRSHAPLVMF
Trigger: AAACATAACCAAAGGAGCATGACTTCGGCAACTTCACCTATCATTCTGAAATGGGACCCCAAAAGTTTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409266.5
CDS TCA 72 bp CCAGGATTCTCTTCTCCTATGCCTCATAAGATAAAGTaGACAATTCTCAAATGCCTCTTACTTTCGTGGGCA +
Preference number: 6 (lower is better)
Translates to: PGFSSPMPHKIK*TILKCLLLSWA
Trigger: TGCCCACGAAAGTAAGAGGCATTTGAGAATTGTTCACTTTATCTTATGAGGCATAGGAGAAGAGAATCCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467488.1
CDS CCA 72 bp TTTTCTGTTCTTGGTACAGCCGGTGAAGATTTGAGATaGACTAGCACAAAGTACATCTCACAAGCCTTTCAA +
Preference number: 6 (lower is better)
Translates to: FSVLGTAGEDLR*TSTKYISQAFQ
Trigger: TTGAAAGGCTTGTGAGATGTACTTTGTGCTAGTCCATCTCAAATCTTCACCGGCTGTACCAAGAACAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466387.5
CDS CAA 72 bp TCTCCTATGCCTTCCAGAAATTCCTTTTTGATGAGATaGCTGTGTGATTCATGCATCTCATCTTTGCAGGGA +
Preference number: 6 (lower is better)
Translates to: SPMPSRNSFLMR*LCDSCISSLQG
Trigger: TCCCTGCAAAGATGAGATGCATGAATCACACAGCAATCTCATCAAAAAGGAATTTCTGGAAGGCATAGGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496251.5
CDS CAA 72 bp TTTGACCTCCCTTTCTTTTTACCAGATGGGCCTTTGTaGCTTGTGTTGACAAGTGTAGTCACCTTCTTATTG +
Preference number: 6 (lower is better)
Translates to: FDLPFFLPDGPL*LVLTSVVTFLL
Trigger: CAATAAGAAGGTGACTACACTTGTCAACACAAGCAACAAAGGCCCATCTGGTAAAAAGAAAGGGAGGTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508970.1
CDS CAA 90 bp CAGGCTGGCTGCTTAAATGCTCTGAGTCTCAATTTTCTTATCTTTTaGATGAGATTGCTGTGTGATTCATGCATCTCATCTTTGCAGGGA +
Preference number: 6 (lower is better)
Translates to: QAGCLNALSLNFLIF*MRLLCDSCISSLQG
Trigger: TCCCTGCAAAGATGAGATGCATGAATCACACAGCAATCTCATCAAAAAGATAAGAAAATTGAGACTCAGAGCATTTAAGCAGCCAGCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466387.5
CDS TCA 72 bp GCCTTCCAGAAATTCCTTTTTGATGAGATTGCTGTGTaGTTCATGCATCTCATCTTTGCAGGGACATTAGAA +
Preference number: 6 (lower is better)
Translates to: AFQKFLFDEIAV*FMHLIFAGTLE
Trigger: TTCTAATGTCCCTGCAAAGATGAGATGCATGAATCACACAGCAATCTCATCAAAAAGGAATTTCTGGAAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496251.5
CDS CCA 72 bp AAGCTGCTGTTACATAACCCTCAAGATTTCCCGAGGTaGAAAGAAGACCTTCATTCACTTAAATCAGAACAT +
Preference number: 6 (lower is better)
Translates to: KLLLHNPQDFPR*KEDLHSLKSEH
Trigger: ATGTTCTGATTTAAGTGAATGAAGGTCTTCTTTCCACCTCGGGAAATCTTGAGGGTTATGTAACAGCAGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466387.5
CDS TCA 72 bp GTTAAAACCTATCGTCCTAGAAGGAATCCATTGCTTTaGATTCACTTAAAGCCTGTACAGGCGAAATGTGTT +
Preference number: 6 (lower is better)
Translates to: VKTYRPRRNPLL*IHLKPVQAKCV
Trigger: AACACATTTCGCCTGTACAGGCTTTAAGTGAATTCAAAGCAATGGATTCCTTCTAGGACGATAGGTTTTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343114.7
ENST00000361291.8
ENST00000402739.9
ENST00000466387.5
ENST00000496558.5
ENST00000540488.5
ENST00000541047.5
ENST00000629316.2
CDS TCA 72 bp ACCTTCCAGAAATTCCTTTTTGATGAGATTGCTGTGTaGTTCATGCATCTCATCTTTGCAGGGACATTAGAA +
Preference number: 6 (lower is better)
Translates to: TFQKFLFDEIAV*FMHLIFAGTLE
Trigger: TTCTAATGTCCCTGCAAAGATGAGATGCATGAATCACACAGCAATCTCATCAAAAAGGAATTTCTGGAAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467488.1
CDS GCA 72 bp GAATCCATGTTACCATTAAAATGTAATGTCCAGAATTaGGCACTAATCTTTAGAAGAGATCTGACGGAGCAG +
Preference number: 6 (lower is better)
Translates to: ESMLPLKCNVQN*ALIFRRDLTEQ
Trigger: CTGCTCCGTCAGATCTCTTCTAAAGATTAGTGCGCAATTCTGGACATTACATTTTAATGGTAACATGGATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000496251.5
ENST00000497804.1