Pregenerated sensors for CTLA4 (Homo sapiens)
Ensembl gene IDs: ENSG00000163599Ensembl transcript IDs: ENST00000295854.10, ENST00000427473.3, ENST00000472206.1, ENST00000648405.2, ENST00000650075.1
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGATACCACCAGCTGTGGCTTCCTTGCAAACCATTGAAAGGAACTaGTGTAAAAGCCCCAAAGCACATGTCAACACCAACTCAGCACAA | + |
|
Preference number: 1 (lower is better) Translates to: QIPPAVASLQTIERN*CKSPKAHVNTNSAQ Trigger: TTGTGCTGAGTTGGTGTTGACATGTGCTTTGGGGCTTTTACACCAGTTCCTTTCAATGGTTTGCAAGGAAGCCACAGCTGGTGGTATCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| 3UTR GCA 90 bp | AGTGTTCTGTCAAGTCAACTCAGATACCACCAGCTGTGGCTTCCTTaGAAACCATTGAAAGGAACTGGTGTAAAAGCCCCAAAGCACATG | + |
|
Preference number: 1 (lower is better) Translates to: SVLSSQLRYHQLWLP*KPLKGTGVKAPKHM Trigger: CATGTGCTTTGGGGCTTTTACACCAGTTCCTTTCAATGGTTTGCAAGGAAGCCACAGCTGGTGGTATCTGAGTTGACTTGACAGAACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| 3UTR CCA 90 bp | CTTCAAGACAGTGTTCTGTCAAGTCAACTCAGATACCACCAGCTGTaGCTTCCTTGCAAACCATTGAAAGGAACTGGTGTAAAAGCCCCA | + |
|
Preference number: 1 (lower is better) Translates to: LQDSVLSSQLRYHQL*LPCKPLKGTGVKAP Trigger: TGGGGCTTTTACACCAGTTCCTTTCAATGGTTTGCAAGGAAGCCACAGCTGGTGGTATCTGAGTTGACTTGACAGAACACTGTCTTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| 3UTR CAA 90 bp | GAGCTTCCTAGAAGGTCATACCTGTGGGTCTCCTGGAGTAAGCCATaGTCTTCAAGACAGTGTTCTGTCAAGTCAACTCAGATACCACCA | + |
|
Preference number: 2 (lower is better) Translates to: ELPRRSYLWVSWSKP*SSRQCSVKSTQIPP Trigger: TGGTGGTATCTGAGTTGACTTGACAGAACACTGTCTTGAAGACAATGGCTTACTCCAGGAGACCCACAGGTATGACCTTCTAGGAAGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| 3UTR-3UTR TCA 90 bp | TTCCTAGAAGGTCATACCTGTGGGTCTCCTGGAGTAAGCCATTGTCTTCAAGACGGTGTATTAGTGTCCTaGGCTCCTCCACAAAACTTC | + |
|
Preference number: 2 (lower is better) Translates to: FLEGHTCGSPGVSHCLQDGVLVS*APPQNF Trigger: GAAGTTTTGTGGAGGAGCTCAGGACACTAATACACC...GTCTTGAAGACAATGGCTTACTCCAGGAGACCCACAGGTATGACCTTCTAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| 3UTR-3UTR CCA 90 bp | GCCATTGTCTTCAAGACAGTGTTCTGTCAAGTCAACTCAGATACCACCAGCTGTTCCACAAAACTTCCCTaGGACCCAAGGTGGAAAGAC | + |
|
Preference number: 2 (lower is better) Translates to: AIVFKTVFCQVNSDTTSCSTKLP*DPRWKD Trigger: GTCTTTCCACCTTGGGTCCCAGGGAAGTTTTGTGGA...ACAGCTGGTGGTATCTGAGTTGACTTGACAGAACACTGTCTTGAAGACAATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| 3UTR CAA 90 bp | CAGTGTTCTGTCAAGTCAACTCAGATACCACCAGCTGTGGCTTCCTaGCAAACCATTGAAAGGAACTGGTGTAAAAGCCCCAAAGCACAT | + |
|
Preference number: 2 (lower is better) Translates to: QCSVKSTQIPPAVAS*QTIERNWCKSPKAH Trigger: ATGTGCTTTGGGGCTTTTACACCAGTTCCTTTCAATGGTTTGCAAGGAAGCCACAGCTGGTGGTATCTGAGTTGACTTGACAGAACACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGTCTTCAAGACAGTGTTCTGTCAAGTCAACTCAGATACCACCAGCTGTGGCTAAAGTGGAGCTGATGTaGCAGAAACATCCCAGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: LSSRQCSVKSTQIPPAVAKVELM*QKHPSS Trigger: AGAGCTGGGATGTTTCTGTCACATCAGCTCCACTTT...AGCCACAGCTGGTGGTATCTGAGTTGACTTGACAGAACACTGTCTTGAAGACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| 3UTR-3UTR TCA 90 bp | CCAACTCAGCACAATTCCACGCAATCAAGCACTGCTATGACCTCATCCAGTTTCAAGCTAGTTAGCAAATaGCCTTGTGTTCTACCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: PTQHNSTQSSTAMTSSSFKLVSK*PCVLPG Trigger: ACCAGGTAGAACACAAGGTCATTTGCTAACTAGCTT...GAAACTGGATGAGGTCATAGCAGTGCTTGATTGCGTGGAATTGTGCTGAGTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| 3UTR-3UTR TCA 90 bp | GCCATTGTCTTCAAGACAGTGTTCTGTCAAGTCAACTCAGATACCACCAGCTGTAATCAAGCACTGCTATaGCCTCATCCAGTTTCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: AIVFKTVFCQVNSDTTSCNQALL*PHPVSK Trigger: CTTGGAAACTGGATGAGGTCATAGCAGTGCTTGATT...ACAGCTGGTGGTATCTGAGTTGACTTGACAGAACACTGTCTTGAAGACAATGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGTCTTCAAGACAGTGTTCTGTCAAGTCAACTCAGATACCACCAGCTGTGGCTACCTTGTGTTCTACCTaGTGTATTAGTGTCCTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: LSSRQCSVKSTQIPPAVATLCST*CISVLS Trigger: GCTCAGGACACTAATACACCAGGTAGAACACAAGGT...AGCCACAGCTGGTGGTATCTGAGTTGACTTGACAGAACACTGTCTTGAAGACAA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTTCTGTCCATGGCATTAACCACATGTTTGTAAGAATTGGGCCCATCGAACTGAGATACCACCAGCTGTaGCTTCCTTGCAAACCATTG | + |
|
Preference number: 2 (lower is better) Translates to: SSVHGINHMFVRIGPIELRYHQL*LPCKPL Trigger: CAATGGTTTGCAAGGAAGCCACAGCTGGTGGTATCT...CAGTTCGATGGGCCCAATTCTTACAAACATGTGGTTAATGCCATGGACAGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| 3UTR-3UTR CCA 90 bp | GCCATTGTCTTCAAGACAGTGTTCTGTCAAGTCAACTCAGATACCACCAGCTGTACCATTGAAAGGAACTaGTGTAAAAGCCCCAAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: AIVFKTVFCQVNSDTTSCTIERN*CKSPKA Trigger: TGCTTTGGGGCTTTTACACCAGTTCCTTTCAATGGT...ACAGCTGGTGGTATCTGAGTTGACTTGACAGAACACTGTCTTGAAGACAATGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTTCTGTCCATGGCATTAACCACATGTTTGTAAGAATTGGGCCCATCGAACTGAATTGCCTCAGCTCTTaGAAATTGAAATATGGACTC | + |
|
Preference number: 2 (lower is better) Translates to: SSVHGINHMFVRIGPIELNCLSS*KLKYGL Trigger: GAGTCCATATTTCAATTTCCAAGAGCTGAGGCAATT...CAGTTCGATGGGCCCAATTCTTACAAACATGTGGTTAATGCCATGGACAGAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| 3UTR CAA 90 bp | GCTCTGTCTTTCTACTCCTTTGCTTTAAATTGTAGTACACGTAATTaGGGTTCCGCATCCAACTTTATATTAAAGAGAGATGAATTCCCC | + |
|
Preference number: 2 (lower is better) Translates to: ALSFYSFALNCSTRN*GSASNFILKRDEFP Trigger: GGGGAATTCATCTCTCTTTAATATAAAGTTGGATGCGGAACCCAAATTACGTGTACTACAATTTAAAGCAAAGGAGTAGAAAGACAGAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGTCTTTCTACTCCTTTGCTTTAAATTGTAGTACACGTAATTTGGGTTCCGCATCAGCTCTTGGAAATTaGAATATGGACTCTCTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: LSFYSFALNCSTRNLGSASALGN*NMDSLL Trigger: AAGAAGAGAGTCCATATTTCAATTTCCAAGAGCTGA...TGCGGAACCCAAATTACGTGTACTACAATTTAAAGCAAAGGAGTAGAAAGACAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| 3UTR CCA 72 bp | CCCATCGAACTGGAGCTTCCTAGAAGGTCATACCTGTaGGTCTCCTGGAGTAAGCCATTGTCTTCAAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: PIELELPRRSYL*VSWSKPLSSRQ Trigger: CTGTCTTGAAGACAATGGCTTACTCCAGGAGACCCACAGGTATGACCTTCTAGGAAGCTCCAGTTCGATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| 3UTR GCA 72 bp | TTCAGAAACCTTCATGCACCCCATTCTGCCACCTGCTaGCTTCTTCTGTCCATGGCATTAACCACATGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: FRNLHAPHSATC*LLLSMALTTCL Trigger: CAAACATGTGGTTAATGCCATGGACAGAAGAAGGCAGCAGGTGGCAGAATGGGGTGCATGAAGGTTTCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| 3UTR GCA 72 bp | TCAAGTCAACTCAGATACCACCAGCTGTGGCTTCCTTaGAAACCATTGAAAGGAACTGGTGTAAAAGCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SSQLRYHQLWLP*KPLKGTGVKAP Trigger: TGGGGCTTTTACACCAGTTCCTTTCAATGGTTTGCAAGGAAGCCACAGCTGGTGGTATCTGAGTTGACTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| 3UTR GCA 72 bp | ATTTTCAGAAACCTTCATGCACCCCATTCTGCCACCTaGTGCCTTCTTCTGTCCATGGCATTAACCACATGT | + |
|
Preference number: 3 (lower is better) Translates to: IFRNLHAPHSAT*CLLLSMALTTC Trigger: ACATGTGGTTAATGCCATGGACAGAAGAAGGCAGCAGGTGGCAGAATGGGGTGCATGAAGGTTTCTGAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| 3UTR CCA 72 bp | AGTGTTCTGTCAAGTCAACTCAGATACCACCAGCTGTaGCTTCCTTGCAAACCATTGAAAGGAACTGGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: SVLSSQLRYHQL*LPCKPLKGTGV Trigger: TACACCAGTTCCTTTCAATGGTTTGCAAGGAAGCCACAGCTGGTGGTATCTGAGTTGACTTGACAGAACACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCATTGTCTTCAAGACAGTGTTCTGTCAAGTCAACTCAGATACCACCAGCTGTCTTCCTTGCAAACCATaGAAAGGAACTGGTGTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: AIVFKTVFCQVNSDTTSCLPCKP*KGTGVK Trigger: TTTTACACCAGTTCCTTTCAATGGTTTGCAAGGAAG...ACAGCTGGTGGTATCTGAGTTGACTTGACAGAACACTGTCTTGAAGACAATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR GCA 90 bp | GCCATTGTCTTCAAGACAGTGTTCTGTCAAGTCAACTCAGATACCACCAGCTGTTGGCGATGCCTCGGCTaGTGGCCAGTACCACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AIVFKTVFCQVNSDTTSCWRCLG*WPVPQQ Trigger: CTGCTGTGGTACTGGCCAGCAGCCGAGGCATCGCCA...ACAGCTGGTGGTATCTGAGTTGACTTGACAGAACACTGTCTTGAAGACAATGGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR CCA 90 bp | GCTTCCTTGCAAACCATTGAAAGGAACTGGTGTAAAAGCCCCAAAGCACATGTCCGATGCCTCGGCTGCTaGCCAGTACCACAGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASLQTIERNWCKSPKAHVRCLGC*PVPQQA Trigger: AGCCTGCTGTGGTACTGGCCAGCAGCCGAGGCATCG...GACATGTGCTTTGGGGCTTTTACACCAGTTCCTTTCAATGGTTTGCAAGGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR GCA 90 bp | TTCCTAGAAGGTCATACCTGTGGGTCTCCTGGAGTAAGCCATTGTCTTCAAGACACACAAAGCTGGCGATaGCTCGGCTGCTGGCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: FLEGHTCGSPGVSHCLQDTQSWR*LGCWPV Trigger: TACTGGCCAGCAGCCGAGGCATCGCCAGCTTTGTGT...GTCTTGAAGACAATGGCTTACTCCAGGAGACCCACAGGTATGACCTTCTAGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR GCA 90 bp | TGCATCCCCATATTAATCCCAAGTGATGCTTTCACTGAAAGTGGAGCTGATGTGACCTGGCTGTCAGCCTaGCGAAGCACTGTCACCCGG | + |
|
Preference number: 4 (lower is better) Translates to: CIPILIPSDAFTESGADVTWLSA*RSTVTR Trigger: CCGGGTGACAGTGCTTCGGCAGGCTGACAGCCAGGT...CACATCAGCTCCACTTTCAGTGAAAGCATCACTTGGGATTAATATGGGGATGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR GCA 90 bp | TTCCTAGAAGGTCATACCTGTGGGTCTCCTGGAGTAAGCCATTGTCTTCAAGACGCAGGCTGGGCCACGTaGATTGCTTTGCAGAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: FLEGHTCGSPGVSHCLQDAGWAT*IALQKT Trigger: TGTCTTCTGCAAAGCAATGCACGTGGCCCAGCCTGC...GTCTTGAAGACAATGGCTTACTCCAGGAGACCCACAGGTATGACCTTCTAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR GCA 90 bp | TTGTCTTCAAGACAGTGTTCTGTCAAGTCAACTCAGATACCACCAGCTGTGGCTGGGTTCCGTTGCCTATaGCCAGGTAGTATGGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSSRQCSVKSTQIPPAVAGFRCL*PGSMAV Trigger: CACCGCCATACTACCTGGGCATAGGCAACGGAACCC...AGCCACAGCTGGTGGTATCTGAGTTGACTTGACAGAACACTGTCTTGAAGACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR CCA 90 bp | TTGTCTTCAAGACAGTGTTCTGTCAAGTCAACTCAGATACCACCAGCTGTGGCTACTCACACACAAAGCTaGCGATGCCTCGGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSSRQCSVKSTQIPPAVATHTQS*RCLGCW Trigger: CCAGCAGCCGAGGCATCGCCAGCTTTGTGTGTGAGT...AGCCACAGCTGGTGGTATCTGAGTTGACTTGACAGAACACTGTCTTGAAGACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR TCA 90 bp | TTGTCTTCAAGACAGTGTTCTGTCAAGTCAACTCAGATACCACCAGCTGTGGCTATGGCGGTGGGTACATaGGCTCCACCTTGCAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: LSSRQCSVKSTQIPPAVAMAVGT*APPCRC Trigger: ACATCTGCAAGGTGGAGCTCATGTACCCACCGCCAT...AGCCACAGCTGGTGGTATCTGAGTTGACTTGACAGAACACTGTCTTGAAGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR GCA 90 bp | CCAACTCAGCACAATTCCACGCAATCAAGCACTGCTATGACCTCATCCAGTTTCCATTCTGCCACCTGCTaGCTTCTTCTGTCCATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PTQHNSTQSSTAMTSSSFHSATC*LLLSMA Trigger: TGCCATGGACAGAAGAAGGCAGCAGGTGGCAGAATG...GAAACTGGATGAGGTCATAGCAGTGCTTGATTGCGTGGAATTGTGCTGAGTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR GCA 90 bp | GCCATTGTCTTCAAGACAGTGTTCTGTCAAGTCAACTCAGATACCACCAGCTGTCCCCATTCTGCCACCTaGTGCCTTCTTCTGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: AIVFKTVFCQVNSDTTSCPHSAT*CLLLSM Trigger: CATGGACAGAAGAAGGCAGCAGGTGGCAGAATGGGG...ACAGCTGGTGGTATCTGAGTTGACTTGACAGAACACTGTCTTGAAGACAATGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR CCA 90 bp | TTGTCTTCAAGACAGTGTTCTGTCAAGTCAACTCAGATACCACCAGCTGTGGCTAGTACCACAGCAGGCTaGGCCACGTGCATTGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSSRQCSVKSTQIPPAVASTTAG*ATCIAL Trigger: CAAAGCAATGCACGTGGCCCAGCCTGCTGTGGTACT...AGCCACAGCTGGTGGTATCTGAGTTGACTTGACAGAACACTGTCTTGAAGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR CCA 90 bp | GCCATTGTCTTCAAGACAGTGTTCTGTCAAGTCAACTCAGATACCACCAGCTGTTCACCCGGACCTCAGTaGCTTTGCCTGGAGATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AIVFKTVFCQVNSDTTSCSPGPQ*LCLEMH Trigger: ATGCATCTCCAGGCAAAGCCACTGAGGTCCGGGTGA...ACAGCTGGTGGTATCTGAGTTGACTTGACAGAACACTGTCTTGAAGACAATGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR GCA 90 bp | GCTTCCTTGCAAACCATTGAAAGGAACTGGTGTAAAAGCCCCAAAGCACATGTCCCCCATCATGTAGGTTaGCGCACAGACTTCAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ASLQTIERNWCKSPKAHVPHHVG*RTDFSH Trigger: GTGACTGAAGTCTGTGCGGCAACCTACATGATGGGG...GACATGTGCTTTGGGGCTTTTACACCAGTTCCTTTCAATGGTTTGCAAGGAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR GCA 90 bp | TTGTCTTCAAGACAGTGTTCTGTCAAGTCAACTCAGATACCACCAGCTGTGGCTTCATGCACCCCATTCTaGCACCTGCTGCCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSSRQCSVKSTQIPPAVASCTPF*HLLPSS Trigger: AGAAGAAGGCAGCAGGTGGCAGAATGGGGTGCATGA...AGCCACAGCTGGTGGTATCTGAGTTGACTTGACAGAACACTGTCTTGAAGACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR CCA 90 bp | CCAACTCAGCACAATTCCACGCAATCAAGCACTGCTATGACCTCATCCAGTTTCCTCAGTGGCTTTGCCTaGAGATGCATACTCACACAC | + |
|
Preference number: 4 (lower is better) Translates to: PTQHNSTQSSTAMTSSSFLSGFA*RCILTH Trigger: GTGTGTGAGTATGCATCTCCAGGCAAAGCCACTGAG...GAAACTGGATGAGGTCATAGCAGTGCTTGATTGCGTGGAATTGTGCTGAGTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTAGAAGGTCATACCTGTGGGTCTCCTGGAGTAAGCCATTGTCTTCAAGACAGGTGCCCGTGCAGATaGAATCATCTAGGAAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FLEGHTCGSPGVSHCLQDRCPCR*NHLGRS Trigger: TGACCTTCCTAGATGATTCCATCTGCACGGGCACCT...GTCTTGAAGACAATGGCTTACTCCAGGAGACCCACAGGTATGACCTTCTAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR CCA 90 bp | GCCATTGTCTTCAAGACAGTGTTCTGTCAAGTCAACTCAGATACCACCAGCTGTTCACTTGATTTCCACTaGAGGTGCCCGTGCAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: AIVFKTVFCQVNSDTTSCSLDFH*RCPCRW Trigger: CCATCTGCACGGGCACCTCCAGTGGAAATCAAGTGA...ACAGCTGGTGGTATCTGAGTTGACTTGACAGAACACTGTCTTGAAGACAATGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR CCA 90 bp | GCTTCCTTGCAAACCATTGAAAGGAACTGGTGTAAAAGCCCCAAAGCACATGTCCAGGTAGTATGGCGGTaGGTACATGAGCTCCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: ASLQTIERNWCKSPKAHVQVVWR*VHELHL Trigger: AAGGTGGAGCTCATGTACCCACCGCCATACTACCTG...GACATGTGCTTTGGGGCTTTTACACCAGTTCCTTTCAATGGTTTGCAAGGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTAGAAGGTCATACCTGTGGGTCTCCTGGAGTAAGCCATTGTCTTCAAGACTCCACAAAACTTCCCTaGGACCCAAGGTGGAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FLEGHTCGSPGVSHCLQDSTKLP*DPRWKD Trigger: GTCTTTCCACCTTGGGTCCCAGGGAAGTTTTGTGGA...GTCTTGAAGACAATGGCTTACTCCAGGAGACCCACAGGTATGACCTTCTAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR CCA 90 bp | CCAACTCAGCACAATTCCACGCAATCAAGCACTGCTATGACCTCATCCAGTTTCTTGGGCCCATCGAACTaGAGCTTCCTAGAAGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PTQHNSTQSSTAMTSSSFLGPSN*SFLEGH Trigger: ATGACCTTCTAGGAAGCTCCAGTTCGATGGGCCCAA...GAAACTGGATGAGGTCATAGCAGTGCTTGATTGCGTGGAATTGTGCTGAGTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| 3UTR CAA 72 bp | GTCAAGTCAACTCAGATACCACCAGCTGTGGCTTCCTaGCAAACCATTGAAAGGAACTGGTGTAAAAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: VKSTQIPPAVAS*QTIERNWCKSP Trigger: GGGGCTTTTACACCAGTTCCTTTCAATGGTTTGCAAGGAAGCCACAGCTGGTGGTATCTGAGTTGACTTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR TCA 90 bp | TTGTCTTCAAGACAGTGTTCTGTCAAGTCAACTCAGATACCACCAGCTGTGGCTATAGTGAGGTTCACTTaGTTTCCACTGGAGGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LSSRQCSVKSTQIPPAVAIVRFT*FPLEVP Trigger: GGGCACCTCCAGTGGAAATCAAGTGAACCTCACTAT...AGCCACAGCTGGTGGTATCTGAGTTGACTTGACAGAACACTGTCTTGAAGACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR GCA 90 bp | TGCATCCCCATATTAATCCCAAGTGATGCTTTCACTGAAAGTGGAGCTGATGTGCTGGGCCACGTGCATTaGTTTGCAGAAGACAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: CIPILIPSDAFTESGADVLGHVH*FAEDRD Trigger: ATCCCTGTCTTCTGCAAAGCAATGCACGTGGCCCAG...CACATCAGCTCCACTTTCAGTGAAAGCATCACTTGGGATTAATATGGGGATGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR GCA 90 bp | TCTTCTGTCCATGGCATTAACCACATGTTTGTAAGAATTGGGCCCATCGAACTGCACTGGAGGTGCCCGTaGAGATGGAATCATCTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSVHGINHMFVRIGPIELHWRCP*RWNHLG Trigger: TCCTAGATGATTCCATCTGCACGGGCACCTCCAGTG...CAGTTCGATGGGCCCAATTCTTACAAACATGTGGTTAATGCCATGGACAGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR GCA 90 bp | TTGTCTTCAAGACAGTGTTCTGTCAAGTCAACTCAGATACCACCAGCTGTGGCTGATTTCCACTGGAGGTaGCCGTGCAGATGGAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: LSSRQCSVKSTQIPPAVADFHWR*PCRWNH Trigger: ATGATTCCATCTGCACGGGCACCTCCAGTGGAAATC...AGCCACAGCTGGTGGTATCTGAGTTGACTTGACAGAACACTGTCTTGAAGACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR GCA 90 bp | TTCCTAGAAGGTCATACCTGTGGGTCTCCTGGAGTAAGCCATTGTCTTCAAGACAAATCTGGGTTCCGTTaGCTATGCCCAGGTAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: FLEGHTCGSPGVSHCLQDKSGFR*LCPGSM Trigger: CATACTACCTGGGCATAGGCAACGGAACCCAGATTT...GTCTTGAAGACAATGGCTTACTCCAGGAGACCCACAGGTATGACCTTCTAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR GCA 90 bp | CCAACTCAGCACAATTCCACGCAATCAAGCACTGCTATGACCTCATCCAGTTTCTTTCAGAAACCTTCATaGACCCCATTCTGCCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: PTQHNSTQSSTAMTSSSFFQKPS*TPFCHL Trigger: CAGGTGGCAGAATGGGGTGCATGAAGGTTTCTGAAA...GAAACTGGATGAGGTCATAGCAGTGCTTGATTGCGTGGAATTGTGCTGAGTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR CCA 90 bp | TCTTCTGTCCATGGCATTAACCACATGTTTGTAAGAATTGGGCCCATCGAACTGTATGCCCAGGTAGTATaGCGGTGGGTACATGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSVHGINHMFVRIGPIELYAQVV*RWVHEL Trigger: GAGCTCATGTACCCACCGCCATACTACCTGGGCATA...CAGTTCGATGGGCCCAATTCTTACAAACATGTGGTTAATGCCATGGACAGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR CCA 90 bp | GCTTCCTTGCAAACCATTGAAAGGAACTGGTGTAAAAGCCCCAAAGCACATGTCCAAGCCATGGCTTTATaGGAGCGGTGTTCAGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ASLQTIERNWCKSPKAHVQAMAL*ERCSGL Trigger: AAGACCTGAACACCGCTCCCATAAAGCCATGGCTTG...GACATGTGCTTTGGGGCTTTTACACCAGTTCCTTTCAATGGTTTGCAAGGAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR CCA 90 bp | TTGTCTTCAAGACAGTGTTCTGTCAAGTCAACTCAGATACCACCAGCTGTGGCTATCCAAGGCAAGCCATaGCTTTATGGGAGCGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSSRQCSVKSTQIPPAVAIQGKP*LYGSGV Trigger: AACACCGCTCCCATAAAGCCATGGCTTGCCTTGGAT...AGCCACAGCTGGTGGTATCTGAGTTGACTTGACAGAACACTGTCTTGAAGACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR CCA 90 bp | CCAACTCAGCACAATTCCACGCAATCAAGCACTGCTATGACCTCATCCAGTTTCGAGGAAGTCAGAATCTaGGCACGGTTCTGGATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: PTQHNSTQSSTAMTSSSFEEVRI*ARFWIN Trigger: ATTGATCCAGAACCGTGCCCAGATTCTGACTTCCTC...GAAACTGGATGAGGTCATAGCAGTGCTTGATTGCGTGGAATTGTGCTGAGTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTAGAAGGTCATACCTGTGGGTCTCCTGGAGTAAGCCATTGTCTTCAAGACTGCCTTTTCCTTCTTTaGGCTGTGCCATTCCCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: FLEGHTCGSPGVSHCLQDCLFLL*AVPFPN Trigger: GTTAGGGAATGGCACAGCCCAAAGAAGGAAAAGGCA...GTCTTGAAGACAATGGCTTACTCCAGGAGACCCACAGGTATGACCTTCTAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR CCA 90 bp | CCAACTCAGCACAATTCCACGCAATCAAGCACTGCTATGACCTCATCCAGTTTCTACCTGTGGGTCTCCTaGAGTAAGCCATTGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PTQHNSTQSSTAMTSSSFYLWVS*SKPLSS Trigger: TGAAGACAATGGCTTACTCCAGGAGACCCACAGGTA...GAAACTGGATGAGGTCATAGCAGTGCTTGATTGCGTGGAATTGTGCTGAGTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR CCA 90 bp | TTGTCTTCAAGACAGTGTTCTGTCAAGTCAACTCAGATACCACCAGCTGTGGCTAGAAGGTCATACCTGTaGGTCTCCTGGAGTAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSSRQCSVKSTQIPPAVARRSYL*VSWSKP Trigger: TGGCTTACTCCAGGAGACCCACAGGTATGACCTTCT...AGCCACAGCTGGTGGTATCTGAGTTGACTTGACAGAACACTGTCTTGAAGACAA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR TCA 90 bp | GCTTCCTTGCAAACCATTGAAAGGAACTGGTGTAAAAGCCCCAAAGCACATGTCGGTGTATTAGTGTCCTaGGCTCCTCCACAAAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: ASLQTIERNWCKSPKAHVGVLVS*APPQNF Trigger: GAAGTTTTGTGGAGGAGCTCAGGACACTAATACACC...GACATGTGCTTTGGGGCTTTTACACCAGTTCCTTTCAATGGTTTGCAAGGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR CCA 90 bp | GCCATTGTCTTCAAGACAGTGTTCTGTCAAGTCAACTCAGATACCACCAGCTGTAGATACCACCAGCTGTaGCTTCCTTGCAAACCATTG | + |
|
Preference number: 4 (lower is better) Translates to: AIVFKTVFCQVNSDTTSCRYHQL*LPCKPL Trigger: CAATGGTTTGCAAGGAAGCCACAGCTGGTGGTATCT...ACAGCTGGTGGTATCTGAGTTGACTTGACAGAACACTGTCTTGAAGACAATGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| 3UTR CAA 72 bp | AGAAGGTCATACCTGTGGGTCTCCTGGAGTAAGCCATaGTCTTCAAGACAGTGTTCTGTCAAGTCAACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RRSYLWVSWSKP*SSRQCSVKSTQ Trigger: CTGAGTTGACTTGACAGAACACTGTCTTGAAGACAATGGCTTACTCCAGGAGACCCACAGGTATGACCTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR TCA 90 bp | TCTTCTGTCCATGGCATTAACCACATGTTTGTAAGAATTGGGCCCATCGAACTGAAAGTGGAGCTGATGTaGCAGAAACATCCCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSVHGINHMFVRIGPIELKVELM*QKHPSS Trigger: AGAGCTGGGATGTTTCTGTCACATCAGCTCCACTTT...CAGTTCGATGGGCCCAATTCTTACAAACATGTGGTTAATGCCATGGACAGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR TCA 90 bp | CCAACTCAGCACAATTCCACGCAATCAAGCACTGCTATGACCTCATCCAGTTTCAGGATCCTGAAGCTTTaGAATGTGTTTGAACCCACA | + |
|
Preference number: 4 (lower is better) Translates to: PTQHNSTQSSTAMTSSSFRILKL*NVFEPT Trigger: TGTGGGTTCAAACACATTTCAAAGCTTCAGGATCCT...GAAACTGGATGAGGTCATAGCAGTGCTTGATTGCGTGGAATTGTGCTGAGTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR GCA 90 bp | GCCATTGTCTTCAAGACAGTGTTCTGTCAAGTCAACTCAGATACCACCAGCTGTCACGCAATCAAGCACTaGTATGACCTCATCCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: AIVFKTVFCQVNSDTTSCHAIKH*YDLIQF Trigger: AAACTGGATGAGGTCATAGCAGTGCTTGATTGCGTG...ACAGCTGGTGGTATCTGAGTTGACTTGACAGAACACTGTCTTGAAGACAATGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR CCA 90 bp | GCCATTGTCTTCAAGACAGTGTTCTGTCAAGTCAACTCAGATACCACCAGCTGTCATGTTTGTAAGAATTaGGCCCATCGAACTGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AIVFKTVFCQVNSDTTSCHVCKN*AHRTGA Trigger: AGCTCCAGTTCGATGGGCCCAATTCTTACAAACATG...ACAGCTGGTGGTATCTGAGTTGACTTGACAGAACACTGTCTTGAAGACAATGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR TCA 90 bp | TGCATCCCCATATTAATCCCAAGTGATGCTTTCACTGAAAGTGGAGCTGATGTGAATCAAGCACTGCTATaGCCTCATCCAGTTTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: CIPILIPSDAFTESGADVNQALL*PHPVSK Trigger: CTTGGAAACTGGATGAGGTCATAGCAGTGCTTGATT...CACATCAGCTCCACTTTCAGTGAAAGCATCACTTGGGATTAATATGGGGATGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR GCA 90 bp | CTGTCTTTCTACTCCTTTGCTTTAAATTGTAGTACACGTAATTTGGGTTCCGCAGGACCTCAGTGGCTTTaGCTGGAGATGCATACTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LSFYSFALNCSTRNLGSAGPQWL*LEMHTH Trigger: GTGAGTATGCATCTCCAGGCAAAGCCACTGAGGTCC...TGCGGAACCCAAATTACGTGTACTACAATTTAAAGCAAAGGAGTAGAAAGACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR CCA 90 bp | TCTTCTGTCCATGGCATTAACCACATGTTTGTAAGAATTGGGCCCATCGAACTGACCTTGTGTTCTACCTaGTGTATTAGTGTCCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSVHGINHMFVRIGPIELTLCST*CISVLS Trigger: GCTCAGGACACTAATACACCAGGTAGAACACAAGGT...CAGTTCGATGGGCCCAATTCTTACAAACATGTGGTTAATGCCATGGACAGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR TCA 90 bp | TTCCTAGAAGGTCATACCTGTGGGTCTCCTGGAGTAAGCCATTGTCTTCAAGACTCAGCTCTTGGAAATTaGAATATGGACTCTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FLEGHTCGSPGVSHCLQDSALGN*NMDSLL Trigger: AAGAAGAGAGTCCATATTTCAATTTCCAAGAGCTGA...GTCTTGAAGACAATGGCTTACTCCAGGAGACCCACAGGTATGACCTTCTAGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR TCA 90 bp | TCTTCTGTCCATGGCATTAACCACATGTTTGTAAGAATTGGGCCCATCGAACTGAAGCTAGTTAGCAAATaGCCTTGTGTTCTACCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSVHGINHMFVRIGPIELKLVSK*PCVLPG Trigger: ACCAGGTAGAACACAAGGTCATTTGCTAACTAGCTT...CAGTTCGATGGGCCCAATTCTTACAAACATGTGGTTAATGCCATGGACAGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR CCA 90 bp | GCTTCCTTGCAAACCATTGAAAGGAACTGGTGTAAAAGCCCCAAAGCACATGTCATCTGGGCACGGTTCTaGATCAATTACATAAATCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASLQTIERNWCKSPKAHVIWARF*INYINL Trigger: CAGATTTATGTAATTGATCCAGAACCGTGCCCAGAT...GACATGTGCTTTGGGGCTTTTACACCAGTTCCTTTCAATGGTTTGCAAGGAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR CCA 90 bp | TTGTCTTCAAGACAGTGTTCTGTCAAGTCAACTCAGATACCACCAGCTGTGGCTAATTGCCTCAGCTCTTaGAAATTGAAATATGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: LSSRQCSVKSTQIPPAVANCLSS*KLKYGL Trigger: GAGTCCATATTTCAATTTCCAAGAGCTGAGGCAATT...AGCCACAGCTGGTGGTATCTGAGTTGACTTGACAGAACACTGTCTTGAAGACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR CCA 90 bp | TCTTCTGTCCATGGCATTAACCACATGTTTGTAAGAATTGGGCCCATCGAACTGGTAGTACACGTAATTTaGGTTCCGCATCCAACTTTA | + |
|
Preference number: 4 (lower is better) Translates to: SSVHGINHMFVRIGPIELVVHVI*VPHPTL Trigger: TAAAGTTGGATGCGGAACCCAAATTACGTGTACTAC...CAGTTCGATGGGCCCAATTCTTACAAACATGTGGTTAATGCCATGGACAGAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR CCA 90 bp | TTCCTAGAAGGTCATACCTGTGGGTCTCCTGGAGTAAGCCATTGTCTTCAAGACACACAAAAACATACGTaGCTCTATGCACAATACTAT | + |
|
Preference number: 4 (lower is better) Translates to: FLEGHTCGSPGVSHCLQDTQKHT*LYAQYY Trigger: ATAGTATTGTGCATAGAGCCACGTATGTTTTTGTGT...GTCTTGAAGACAATGGCTTACTCCAGGAGACCCACAGGTATGACCTTCTAGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR GCA 90 bp | CTGTCTTTCTACTCCTTTGCTTTAAATTGTAGTACACGTAATTTGGGTTCCGCACAGCTGTGGCTTCCTTaGAAACCATTGAAAGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: LSFYSFALNCSTRNLGSAQLWLP*KPLKGT Trigger: AGTTCCTTTCAATGGTTTGCAAGGAAGCCACAGCTG...TGCGGAACCCAAATTACGTGTACTACAATTTAAAGCAAAGGAGTAGAAAGACAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR CCA 90 bp | CTGTCTTTCTACTCCTTTGCTTTAAATTGTAGTACACGTAATTTGGGTTCCGCAACATTCTGGCTCTGTTaGGGGCATTTTCACATAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LSFYSFALNCSTRNLGSATFWLC*GHFHID Trigger: GTCTATGTGAAAATGCCCCCAACAGAGCCAGAATGT...TGCGGAACCCAAATTACGTGTACTACAATTTAAAGCAAAGGAGTAGAAAGACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR TCA 90 bp | CTGTCTTTCTACTCCTTTGCTTTAAATTGTAGTACACGTAATTTGGGTTCCGCAGCTTTGAAATGTGTTTaGACCCACACAGAATCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSFYSFALNCSTRNLGSAALKCV*THTESR Trigger: CCTTGATTCTGTGTGGGTTCAAACACATTTCAAAGC...TGCGGAACCCAAATTACGTGTACTACAATTTAAAGCAAAGGAGTAGAAAGACAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS GCA 90 bp | GGCTGTCAGCCTGCCGAAGCACTGTCACCCGGACCTCAGTGGCTTTaGCTGGAGATGCATACTCACACACAAAGCTGGCGATGCCTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: GCQPAEALSPGPQWL*LEMHTHTQSWRCLG Trigger: GCCGAGGCATCGCCAGCTTTGTGTGTGAGTATGCATCTCCAGGCAAAGCCACTGAGGTCCGGGTGACAGTGCTTCGGCAGGCTGACAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000295854.10 ENST00000427473.3 ENST00000648405.2 ENST00000650075.1 |
||
| CDS CCA 90 bp | GGACCTCAGTGGCTTTGCCTGGAGATGCATACTCACACACAAAGCTaGCGATGCCTCGGCTGCTGGCCAGTACCACAGCAGGCTGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GPQWLCLEMHTHTQS*RCLGCWPVPQQAGP Trigger: TGGCCCAGCCTGCTGTGGTACTGGCCAGCAGCCGAGGCATCGCCAGCTTTGTGTGTGAGTATGCATCTCCAGGCAAAGCCACTGAGGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000295854.10 ENST00000427473.3 ENST00000648405.2 ENST00000650075.1 |
||
| CDS GCA 90 bp | TGCCTGGAGATGCATACTCACACACAAAGCTGGCGATGCCTCGGCTaGTGGCCAGTACCACAGCAGGCTGGGCCACGTGCATTGCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: CLEMHTHTQSWRCLG*WPVPQQAGPRALLC Trigger: GCAAAGCAATGCACGTGGCCCAGCCTGCTGTGGTACTGGCCAGCAGCCGAGGCATCGCCAGCTTTGTGTGTGAGTATGCATCTCCAGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295854.10 ENST00000648405.2 |
||
| CDS CCA 90 bp | GTCAGCCTGCCGAAGCACTGTCACCCGGACCTCAGTGGCTTTGCCTaGAGATGCATACTCACACACAAAGCTGGCGATGCCTCGGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: VSLPKHCHPDLSGFA*RCILTHKAGDASAA Trigger: AGCAGCCGAGGCATCGCCAGCTTTGTGTGTGAGTATGCATCTCCAGGCAAAGCCACTGAGGTCCGGGTGACAGTGCTTCGGCAGGCTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000295854.10 ENST00000427473.3 ENST00000648405.2 ENST00000650075.1 |
||
| CDS CCA 90 bp | CTGGAGATGCATACTCACACACAAAGCTGGCGATGCCTCGGCTGCTaGCCAGTACCACAGCAGGCTGGGCCACGTGCATTGCTTTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LEMHTHTQSWRCLGC*PVPQQAGPRALLCR Trigger: TCTGCAAAGCAATGCACGTGGCCCAGCCTGCTGTGGTACTGGCCAGCAGCCGAGGCATCGCCAGCTTTGTGTGTGAGTATGCATCTCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295854.10 ENST00000648405.2 |
||
| CDS CCA 90 bp | TCACCTGGCTGTCAGCCTGCCGAAGCACTGTCACCCGGACCTCAGTaGCTTTGCCTGGAGATGCATACTCACACACAAAGCTGGCGATGC | + |
|
Preference number: 5 (lower is better) Translates to: SPGCQPAEALSPGPQ*LCLEMHTHTQSWRC Trigger: GCATCGCCAGCTTTGTGTGTGAGTATGCATCTCCAGGCAAAGCCACTGAGGTCCGGGTGACAGTGCTTCGGCAGGCTGACAGCCAGGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000295854.10 ENST00000427473.3 ENST00000648405.2 ENST00000650075.1 |
||
| CDS TCA 90 bp | TCTGGGTTCCGTTGCCTATGCCCAGGTAGTATGGCGGTGGGTACATaGGCTCCACCTTGCAGATGTAGAGTCCCGTGTCCATGGCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SGFRCLCPGSMAVGT*APPCRCRVPCPWPS Trigger: TGAGGGCCATGGACACGGGACTCTACATCTGCAAGGTGGAGCTCATGTACCCACCGCCATACTACCTGGGCATAGGCAACGGAACCCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000295854.10 ENST00000427473.3 ENST00000648405.2 ENST00000650075.1 |
||
| CDS CCA 90 bp | ACAAAGCTGGCGATGCCTCGGCTGCTGGCCAGTACCACAGCAGGCTaGGCCACGTGCATTGTGAGAAATAGATTCTTCAAGATGGTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TKLAMPRLLASTTAG*ATCIVRNRFFKMVV Trigger: CACAACCATCTTGAAGAATCTATTTCTCACAATGCACGTGGCCCAGCCTGCTGTGGTACTGGCCAGCAGCCGAGGCATCGCCAGCTTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000427473.3 ENST00000650075.1 |
||
| CDS TCA 90 bp | AGTCCCGTGTCCATGGCCCTCAGTCCTTGGATAGTGAGGTTCACTTaGTTTCCACTGGAGGTGCCCGTGCAGATGGAATCATCTAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SPVSMALSPWIVRFT*FPLEVPVQMESSRK Trigger: CTTCCTAGATGATTCCATCTGCACGGGCACCTCCAGTGGAAATCAAGTGAACCTCACTATCCAAGGACTGAGGGCCATGGACACGGGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000295854.10 ENST00000427473.3 ENST00000648405.2 ENST00000650075.1 |
||
| CDS CCA 90 bp | TACATAAATCTGGGTTCCGTTGCCTATGCCCAGGTAGTATGGCGGTaGGTACATGAGCTCCACCTTGCAGATGTAGAGTCCCGTGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: YINLGSVAYAQVVWR*VHELHLADVESRVH Trigger: ATGGACACGGGACTCTACATCTGCAAGGTGGAGCTCATGTACCCACCGCCATACTACCTGGGCATAGGCAACGGAACCCAGATTTATGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000295854.10 ENST00000427473.3 ENST00000648405.2 ENST00000650075.1 |
||
| CDS CCA 90 bp | AGCAATTACATAAATCTGGGTTCCGTTGCCTATGCCCAGGTAGTATaGCGGTGGGTACATGAGCTCCACCTTGCAGATGTAGAGTCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: SNYINLGSVAYAQVV*RWVHELHLADVESR Trigger: ACGGGACTCTACATCTGCAAGGTGGAGCTCATGTACCCACCGCCATACTACCTGGGCATAGGCAACGGAACCCAGATTTATGTAATTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000295854.10 ENST00000427473.3 |
||
| CDS CCA 90 bp | ATCAATTACATAAATCTGGGTTCCGTTGCCTATGCCCAGGTAGTATaGCGGTGGGTACATGAGCTCCACCTTGCAGATGTAGAGTCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: INYINLGSVAYAQVV*RWVHELHLADVESR Trigger: ACGGGACTCTACATCTGCAAGGTGGAGCTCATGTACCCACCGCCATACTACCTGGGCATAGGCAACGGAACCCAGATTTATGTAATTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000648405.2 ENST00000650075.1 |
||
| CDS-3UTR CAA 90 bp | TTCCTAGAAGGTCATACCTGTGGGTCTCCTGGAGTAAGCCATTGTCTTCAAGACGCCACGTGCATTGCTTaGCAGAAGACAGGGATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FLEGHTCGSPGVSHCLQDATCIA*QKTGMK Trigger: CTTCATCCCTGTCTTCTGCAAAGCAATGCACGTGGC...GTCTTGAAGACAATGGCTTACTCCAGGAGACCCACAGGTATGACCTTCTAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR CAA 90 bp | TCTTCTGTCCATGGCATTAACCACATGTTTGTAAGAATTGGGCCCATCGAACTGGCTGGGCCACGTGCATaGCTTTGCAGAAGACAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SSVHGINHMFVRIGPIELAGPRA*LCRRQG Trigger: TCCCTGTCTTCTGCAAAGCAATGCACGTGGCCCAGC...CAGTTCGATGGGCCCAATTCTTACAAACATGTGGTTAATGCCATGGACAGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR CAA 90 bp | TTGTCTTCAAGACAGTGTTCTGTCAAGTCAACTCAGATACCACCAGCTGTGGCTCGGACCTCAGTGGCTTaGCCTGGAGATGCATACTCA | + |
|
Preference number: 5 (lower is better) Translates to: LSSRQCSVKSTQIPPAVARTSVA*PGDAYS Trigger: TGAGTATGCATCTCCAGGCAAAGCCACTGAGGTCCG...AGCCACAGCTGGTGGTATCTGAGTTGACTTGACAGAACACTGTCTTGAAGACAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR CAA 90 bp | CCAACTCAGCACAATTCCACGCAATCAAGCACTGCTATGACCTCATCCAGTTTCGATAGTGAGGTTCACTaGATTTCCACTGGAGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PTQHNSTQSSTAMTSSSFDSEVH*ISTGGA Trigger: GGCACCTCCAGTGGAAATCAAGTGAACCTCACTATC...GAAACTGGATGAGGTCATAGCAGTGCTTGATTGCGTGGAATTGTGCTGAGTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR CAA 90 bp | GCTTCCTTGCAAACCATTGAAAGGAACTGGTGTAAAAGCCCCAAAGCACATGTCCATGGCCCTCAGTCCTaGGATAGTGAGGTTCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: ASLQTIERNWCKSPKAHVHGPQS*DSEVHL Trigger: CAAGTGAACCTCACTATCCAAGGACTGAGGGCCATG...GACATGTGCTTTGGGGCTTTTACACCAGTTCCTTTCAATGGTTTGCAAGGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR CAA 90 bp | TGCATCCCCATATTAATCCCAAGTGATGCTTTCACTGAAAGTGGAGCTGATGTGTCCCCATCATGTAGGTaGCCGCACAGACTTCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: CIPILIPSDAFTESGADVSPSCR*PHRLQS Trigger: TGACTGAAGTCTGTGCGGCAACCTACATGATGGGGA...CACATCAGCTCCACTTTCAGTGAAAGCATCACTTGGGATTAATATGGGGATGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR CAA 90 bp | TTCCTAGAAGGTCATACCTGTGGGTCTCCTGGAGTAAGCCATTGTCTTCAAGACCACATTCTGGCTCTGTaGGGGGCATTTTCACATAGA | + |
|
Preference number: 5 (lower is better) Translates to: FLEGHTCGSPGVSHCLQDHILAL*GAFSHR Trigger: TCTATGTGAAAATGCCCCCAACAGAGCCAGAATGTG...GTCTTGAAGACAATGGCTTACTCCAGGAGACCCACAGGTATGACCTTCTAGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR CAA 90 bp | TGCATCCCCATATTAATCCCAAGTGATGCTTTCACTGAAAGTGGAGCTGATGTGCCAGCTGTGGCTTCCTaGCAAACCATTGAAAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: CIPILIPSDAFTESGADVPAVAS*QTIERN Trigger: GTTCCTTTCAATGGTTTGCAAGGAAGCCACAGCTGG...CACATCAGCTCCACTTTCAGTGAAAGCATCACTTGGGATTAATATGGGGATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS-3UTR CAA 90 bp | TTGTCTTCAAGACAGTGTTCTGTCAAGTCAACTCAGATACCACCAGCTGTGGCTTGTAGTACACGTAATTaGGGTTCCGCATCCAACTTT | + |
|
Preference number: 5 (lower is better) Translates to: LSSRQCSVKSTQIPPAVACSTRN*GSASNF Trigger: AAAGTTGGATGCGGAACCCAAATTACGTGTACTACA...AGCCACAGCTGGTGGTATCTGAGTTGACTTGACAGAACACTGTCTTGAAGACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS TCA 90 bp | CGGTGTTCAGGTCTTCAGGAAGTAGAGCAAAACCTTTCAGGATCCTaGAGCTTTGAAATGTGTTTGAACCCACACAGAATCAAGGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: RCSGLQEVEQNLSGS*SFEMCLNPHRIKDF Trigger: AAAGTCCTTGATTCTGTGTGGGTTCAAACACATTTCAAAGCTTCAGGATCCTGAAAGGTTTTGCTCTACTTCCTGAAGACCTGAACACCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS CCA 72 bp | GCGATGCCTCGGCTGCTGGCCAGTACCACAGCAGGCTaGGCCACGTGCATTGCTTTGCAGAAGACAGGGATG | + |
|
Preference number: 6 (lower is better) Translates to: AMPRLLASTTAG*ATCIALQKTGM Trigger: CATCCCTGTCTTCTGCAAAGCAATGCACGTGGCCCAGCCTGCTGTGGTACTGGCCAGCAGCCGAGGCATCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000295854.10 ENST00000472206.1 ENST00000648405.2 |
||
| CDS GCA 72 bp | ATGCATACTCACACACAAAGCTGGCGATGCCTCGGCTaGTGGCCAGTACCACAGCAGGCTGGGCCACGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: MHTHTQSWRCLG*WPVPQQAGPRA Trigger: TGCACGTGGCCCAGCCTGCTGTGGTACTGGCCAGCAGCCGAGGCATCGCCAGCTTTGTGTGTGAGTATGCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000295854.10 ENST00000427473.3 ENST00000648405.2 ENST00000650075.1 |
||
| CDS GCA 72 bp | GTTGCCGCACAGACTTCAGTCACCTGGCTGTCAGCCTaGCGAAGCACTGTCACCCGGACCTCAGTGGCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: VAAQTSVTWLSA*RSTVTRTSVAL Trigger: CAAAGCCACTGAGGTCCGGGTGACAGTGCTTCGGCAGGCTGACAGCCAGGTGACTGAAGTCTGTGCGGCAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000295854.10 ENST00000427473.3 ENST00000648405.2 ENST00000650075.1 |
||
| CDS CCA 72 bp | CATACTCACACACAAAGCTGGCGATGCCTCGGCTGCTaGCCAGTACCACAGCAGGCTGGGCCACGTGCATTG | + |
|
Preference number: 6 (lower is better) Translates to: HTHTQSWRCLGC*PVPQQAGPRAL Trigger: CAATGCACGTGGCCCAGCCTGCTGTGGTACTGGCCAGCAGCCGAGGCATCGCCAGCTTTGTGTGTGAGTATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000295854.10 ENST00000427473.3 ENST00000648405.2 ENST00000650075.1 |
||
| CDS CAA 90 bp | TGGCTGTCAGCCTGCCGAAGCACTGTCACCCGGACCTCAGTGGCTTaGCCTGGAGATGCATACTCACACACAAAGCTGGCGATGCCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: WLSACRSTVTRTSVA*PGDAYSHTKLAMPR Trigger: CCGAGGCATCGCCAGCTTTGTGTGTGAGTATGCATCTCCAGGCAAAGCCACTGAGGTCCGGGTGACAGTGCTTCGGCAGGCTGACAGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000295854.10 ENST00000427473.3 ENST00000648405.2 ENST00000650075.1 |
||
| CDS CAA 72 bp | GCCTGCCGAAGCACTGTCACCCGGACCTCAGTGGCTTaGCCTGGAGATGCATACTCACACACAAAGCTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: ACRSTVTRTSVA*PGDAYSHTKLA Trigger: CGCCAGCTTTGTGTGTGAGTATGCATCTCCAGGCAAAGCCACTGAGGTCCGGGTGACAGTGCTTCGGCAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000295854.10 ENST00000427473.3 ENST00000648405.2 ENST00000650075.1 |
||
| CDS GCA 72 bp | CCTGCCGAAGCACTGTCACCCGGACCTCAGTGGCTTTaGCTGGAGATGCATACTCACACACAAAGCTGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: PAEALSPGPQWL*LEMHTHTQSWR Trigger: TCGCCAGCTTTGTGTGTGAGTATGCATCTCCAGGCAAAGCCACTGAGGTCCGGGTGACAGTGCTTCGGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000295854.10 ENST00000427473.3 ENST00000648405.2 ENST00000650075.1 |
||
| CDS CCA 72 bp | CCGAAGCACTGTCACCCGGACCTCAGTGGCTTTGCCTaGAGATGCATACTCACACACAAAGCTGGCGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: PKHCHPDLSGFA*RCILTHKAGDA Trigger: GGCATCGCCAGCTTTGTGTGTGAGTATGCATCTCCAGGCAAAGCCACTGAGGTCCGGGTGACAGTGCTTCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000295854.10 ENST00000427473.3 ENST00000648405.2 ENST00000650075.1 |
||
| CDS TCA 72 bp | CGTTGCCTATGCCCAGGTAGTATGGCGGTGGGTACATaGGCTCCACCTTGCAGATGTAGAGTCCCGTGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RCLCPGSMAVGT*APPCRCRVPCP Trigger: TGGACACGGGACTCTACATCTGCAAGGTGGAGCTCATGTACCCACCGCCATACTACCTGGGCATAGGCAACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000295854.10 ENST00000427473.3 ENST00000648405.2 ENST00000650075.1 |
||
| CDS CCA 72 bp | CTGGGTTCCGTTGCCTATGCCCAGGTAGTATGGCGGTaGGTACATGAGCTCCACCTTGCAGATGTAGAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LGSVAYAQVVWR*VHELHLADVES Trigger: GGACTCTACATCTGCAAGGTGGAGCTCATGTACCCACCGCCATACTACCTGGGCATAGGCAACGGAACCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000295854.10 ENST00000427473.3 ENST00000648405.2 ENST00000650075.1 |
||
| CDS CCA 72 bp | GCGATGCCTCGGCTGCTGGCCAGTACCACAGCAGGCTaGGCCACGTGCATTGTGAGAAATAGATTCTTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: AMPRLLASTTAG*ATCIVRNRFFK Trigger: CTTGAAGAATCTATTTCTCACAATGCACGTGGCCCAGCCTGCTGTGGTACTGGCCAGCAGCCGAGGCATCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000427473.3 ENST00000650075.1 |
||
| CDS CAA 90 bp | CTCCACCTTGCAGATGTAGAGTCCCGTGTCCATGGCCCTCAGTCCTaGGATAGTGAGGTTCACTTGATTTCCACTGGAGGTGCCCGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: LHLADVESRVHGPQS*DSEVHLISTGGARA Trigger: TGCACGGGCACCTCCAGTGGAAATCAAGTGAACCTCACTATCCAAGGACTGAGGGCCATGGACACGGGACTCTACATCTGCAAGGTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000295854.10 ENST00000427473.3 ENST00000648405.2 ENST00000650075.1 |
||
| CDS CCA 72 bp | GCTGAGCCTTGTGCCGCTGAAATCCAAGGCAAGCCATaGCTTTATGGGAGCGGTGTTCAGGTCTTCAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: AEPCAAEIQGKP*LYGSGVQVFRK Trigger: CTTCCTGAAGACCTGAACACCGCTCCCATAAAGCCATGGCTTGCCTTGGATTTCAGCGGCACAAGGCTCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||
| CDS TCA 72 bp | TCCATGGCCCTCAGTCCTTGGATAGTGAGGTTCACTTaGTTTCCACTGGAGGTGCCCGTGCAGATGGAATCA | + |
|
Preference number: 6 (lower is better) Translates to: SMALSPWIVRFT*FPLEVPVQMES Trigger: TGATTCCATCTGCACGGGCACCTCCAGTGGAAATCAAGTGAACCTCACTATCCAAGGACTGAGGGCCATGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000295854.10 ENST00000427473.3 ENST00000648405.2 ENST00000650075.1 |
||
| CDS CAA 72 bp | CATCTAGGAAGGTCAACTCATTCCCCATCATGTAGGTaGCCGCACAGACTTCAGTCACCTGGCTGTCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: HLGRSTHSPSCR*PHRLQSPGCQP Trigger: AGGCTGACAGCCAGGTGACTGAAGTCTGTGCGGCAACCTACATGATGGGGAATGAGTTGACCTTCCTAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000295854.10 ENST00000427473.3 ENST00000648405.2 ENST00000650075.1 |
||
| CDS CAA 72 bp | GCAGATGTAGAGTCCCGTGTCCATGGCCCTCAGTCCTaGGATAGTGAGGTTCACTTGATTTCCACTGGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: ADVESRVHGPQS*DSEVHLISTGG Trigger: ACCTCCAGTGGAAATCAAGTGAACCTCACTATCCAAGGACTGAGGGCCATGGACACGGGACTCTACATCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000295854.10 ENST00000427473.3 ENST00000648405.2 ENST00000650075.1 |
||
| CDS CAA 90 bp | AGATGGAATCATCTAGGAAGGTCAACTCATTCCCCATCATGTAGGTaGCCGCACAGACTTCAGTCACCTGGCTGTCAGCCTGCCGAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RWNHLGRSTHSPSCR*PHRLQSPGCQPAEA Trigger: TGCTTCGGCAGGCTGACAGCCAGGTGACTGAAGTCTGTGCGGCAACCTACATGATGGGGAATGAGTTGACCTTCCTAGATGATTCCATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000295854.10 ENST00000427473.3 ENST00000648405.2 ENST00000650075.1 |
||
| CDS TCA 72 bp | TGGCCAGTACCACAGCAGGCTGGGCCACGTGCATTGTaGGAAATAGATTCTTCAAGATGGTTGTGGCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: WPVPQQAGPRAL*EIDSSRWLWQE Trigger: TTCCTGCCACAACCATCTTGAAGAATCTATTTCTCACAATGCACGTGGCCCAGCCTGCTGTGGTACTGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000427473.3 ENST00000650075.1 |
||
| CDS CCA 72 bp | ATAAATCTGGGTTCCGTTGCCTATGCCCAGGTAGTATaGCGGTGGGTACATGAGCTCCACCTTGCAGATGTA | + |
|
Preference number: 6 (lower is better) Translates to: INLGSVAYAQVV*RWVHELHLADV Trigger: TACATCTGCAAGGTGGAGCTCATGTACCCACCGCCATACTACCTGGGCATAGGCAACGGAACCCAGATTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000295854.10 ENST00000427473.3 ENST00000648405.2 ENST00000650075.1 |
||
| CDS CCA 72 bp | GGTTCACTTGATTTCCACTGGAGGTGCCCGTGCAGATaGAATCATCTAGGAAGGTCAACTCATTCCCCATCA | + |
|
Preference number: 6 (lower is better) Translates to: GSLDFHWRCPCR*NHLGRSTHSPS Trigger: TGATGGGGAATGAGTTGACCTTCCTAGATGATTCCATCTGCACGGGCACCTCCAGTGGAAATCAAGTGAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000295854.10 ENST00000427473.3 ENST00000648405.2 ENST00000650075.1 |
||
| CDS CCA 72 bp | AACAGAAGACCTGGCTCTACCATGAAATATGTGATTTaGGGCAAGTCACACTTCCCCCATGTCCTTCATTTT | + |
|
Preference number: 6 (lower is better) Translates to: NRRPGSTMKYVI*GKSHFPHVLHF Trigger: AAAATGAAGGACATGGGGGAAGTGTGACTTGCCCCAAATCACATATTTCATGGTAGAGCCAGGTCTTCTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000427473.3 ENST00000650075.1 |
||
| CDS CAA 72 bp | AAACAGAAGACCTGGCTCTACCATGAAATATGTGATTaGGGGCAAGTCACACTTCCCCCATGTCCTTCATTT | + |
|
Preference number: 6 (lower is better) Translates to: KQKTWLYHEICD*GQVTLPPCPSF Trigger: AAATGAAGGACATGGGGGAAGTGTGACTTGCCCCAAATCACATATTTCATGGTAGAGCCAGGTCTTCTGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000427473.3 ENST00000650075.1 |
||
| CDS TCA 72 bp | GGAAGTAGAGCAAAACCTTTCAGGATCCTGAAGCTTTaGAATGTGTTTGAACCCACACAGAATCAAGGACTT | + |
|
Preference number: 6 (lower is better) Translates to: GSRAKPFRILKL*NVFEPTQNQGL Trigger: AAGTCCTTGATTCTGTGTGGGTTCAAACACATTTCAAAGCTTCAGGATCCTGAAAGGTTTTGCTCTACTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648405.2 |
||