Pregenerated sensors for CTHRC1 (Homo sapiens)
Ensembl gene IDs: ENSG00000164932Ensembl transcript IDs: ENST00000330295.10, ENST00000415886.2, ENST00000520337.1, ENST00000520880.1
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGTCCACCACCTCCCTCTGCCGGAGCTGCGCCTTTTGCTTCCCCTTaGGGATCTCAGAGGCGCTCGACGGCGCGGGCAGCTGCAGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: GPPPPSAGAAPFASP*GSQRRSTARAAAAA Trigger: TGCTGCTGCAGCTGCCCGCGCCGTCGAGCGCCTCTGAGATCCCCAAGGGGAAGCAAAAGGCGCAGCTCCGGCAGAGGGAGGTGGTGGACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330295.10 ENST00000415886.2 |
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| CDS TCA 90 bp | TTCTCCCGTAGCTTGACTGTGATGCTCCTACCTGGCGGCCACATATaGAGACCCAGGGTGTGTGTAATGACAGACTGCCCATTTGGTTTA | + |
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Preference number: 5 (lower is better) Translates to: FSRSLTVMLLPGGHI*RPRVCVMTDCPFGL Trigger: TAAACCAAATGGGCAGTCTGTCATTACACACACCCTGGGTCTTCATATGTGGCCGCCAGGTAGGAGCATCACAGTCAAGCTACGGGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520337.1 |
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| CDS TCA 90 bp | AGAGGTCCTGAACATTCAGCTCCATTGAATGTGAAATACCAACGCTaGCAGCATGCATTTCTGCATTTTAGCCGAAGTGAGCCACTGAAC | + |
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Preference number: 5 (lower is better) Translates to: RGPEHSAPLNVKYQR*QHAFLHFSRSEPLN Trigger: GTTCAGTGGCTCACTTCGGCTAAAATGCAGAAATGCATGCTGTCAGCGTTGGTATTTCACATTCAATGGAGCTGAATGTTCAGGACCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000330295.10 ENST00000520337.1 ENST00000520880.1 |
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| CDS CCA 72 bp | CCTCCCTCTGCCGGAGCTGCGCCTTTTGCTTCCCCTTaGGGATCTCAGAGGCGCTCGACGGCGCGGGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: PPSAGAAPFASP*GSQRRSTARAA Trigger: AGCTGCCCGCGCCGTCGAGCGCCTCTGAGATCCCCAAGGGGAAGCAAAAGGCGCAGCTCCGGCAGAGGGAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330295.10 ENST00000415886.2 |
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| CDS CCA 72 bp | CCCGACCTGGGATCCCAGGTGTACCCGGAATGCCATTaGCCCCAGGGCTCCCGTCTCGACCAGGCACTCCTG | + |
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Preference number: 6 (lower is better) Translates to: PDLGSQVYPECH*PQGSRLDQALL Trigger: CAGGAGTGCCTGGTCGAGACGGGAGCCCTGGGGCCAATGGCATTCCGGGTACACCTGGGATCCCAGGTCGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000330295.10 ENST00000415886.2 ENST00000520337.1 |
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| CDS CAA 72 bp | TCCCGACCTGGGATCCCAGGTGTACCCGGAATGCCATaGGCCCCAGGGCTCCCGTCTCGACCAGGCACTCCT | + |
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Preference number: 6 (lower is better) Translates to: SRPGIPGVPGMP*APGLPSRPGTP Trigger: AGGAGTGCCTGGTCGAGACGGGAGCCCTGGGGCCAATGGCATTCCGGGTACACCTGGGATCCCAGGTCGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000330295.10 ENST00000415886.2 ENST00000520337.1 |
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| CDS GCA 72 bp | ATCCATCCCGACCTGGGATCCCAGGTGTACCCGGAATaGCATTGGCCCCAGGGCTCCCGTCTCGACCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: IHPDLGSQVYPE*HWPQGSRLDQA Trigger: TGCCTGGTCGAGACGGGAGCCCTGGGGCCAATGGCATTCCGGGTACACCTGGGATCCCAGGTCGGGATGGAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000330295.10 ENST00000415886.2 ENST00000520337.1 |
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| CDS CAA 90 bp | TCCATTATACAGGTCCACCACCTCCCTCTGCCGGAGCTGCGCCTTTaGCTTCCCCTTGGGGATCTCAGAGGCGCTCGACGGCGCGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: SIIQVHHLPLPELRL*LPLGDLRGARRRGQ Trigger: CTGCCCGCGCCGTCGAGCGCCTCTGAGATCCCCAAGGGGAAGCAAAAGGCGCAGCTCCGGCAGAGGGAGGTGGTGGACCTGTATAATGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000330295.10 ENST00000415886.2 |
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| CDS CCA 72 bp | ACATTCCCCCTTTTCTCCTTTGAATCCATCCCGACCTaGGATCCCAGGTGTACCCGGAATGCCATTGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: TFPLFSFESIPT*DPRCTRNAIGP Trigger: GGGGCCAATGGCATTCCGGGTACACCTGGGATCCCAGGTCGGGATGGATTCAAAGGAGAAAAGGGGGAATGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000330295.10 ENST00000415886.2 ENST00000520337.1 |
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| CDS CAA 90 bp | CAGGACTCCTCAAAGCTTTCCCTCAGACATTCCCCCTTTTCTCCTTaGAATCCATCCCGACCTGGGATCCCAGGTGTACCCGGAATGCCA | + |
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Preference number: 6 (lower is better) Translates to: QDSSKLSLRHSPFSP*NPSRPGIPGVPGMP Trigger: TGGCATTCCGGGTACACCTGGGATCCCAGGTCGGGATGGATTCAAAGGAGAAAAGGGGGAATGTCTGAGGGAAAGCTTTGAGGAGTCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000330295.10 ENST00000415886.2 ENST00000520337.1 |
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| CDS TCA 72 bp | AGCTTGACTGTGATGCTCCTACCTGGCGGCCACATATaGAGACCCAGGGTGTGTGTAATGACAGACTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: SLTVMLLPGGHI*RPRVCVMTDCP Trigger: TGGGCAGTCTGTCATTACACACACCCTGGGTCTTCATATGTGGCCGCCAGGTAGGAGCATCACAGTCAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520337.1 |
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| CDS CCA 72 bp | AAGCACATTCCATTATACTTCCCACAGATGAGCCCCTaGAAAGCACTCGGGCCGTTCATTTCCAGTTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: KHIPLYFPQMSP*KALGPFISSFL Trigger: CAGGAAACTGGAAATGAACGGCCCGAGTGCTTTCCAGGGGCTCATCTGTGGGAAGTATAATGGAATGTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520337.1 |
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| CDS CCA 72 bp | CATAATTCAATGAACTCCATGAACACTGCTTGTAGTTaGGTGTCCAGGACTCCTCAAAGCTTTCCCTCAGAC | + |
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Preference number: 6 (lower is better) Translates to: HNSMNSMNTACS*VSRTPQSFPSD Trigger: GTCTGAGGGAAAGCTTTGAGGAGTCCTGGACACCCAACTACAAGCAGTGTTCATGGAGTTCATTGAATTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000330295.10 ENST00000415886.2 ENST00000520337.1 |
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| CDS CCA 72 bp | AAGACCCAGGGTGTGTGTAATGACAGACTGCCCATTTaGTTTAAACAGAAGCAAAACAGGTCCTTAGAGGGT | + |
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Preference number: 6 (lower is better) Translates to: KTQGVCNDRLPI*FKQKQNRSLEG Trigger: ACCCTCTAAGGACCTGTTTTGCTTCTGTTTAAACCAAATGGGCAGTCTGTCATTACACACACCCTGGGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520337.1 |
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| CDS TCA 72 bp | AGCATGCATTTCTGCATTTTAGCCGAAGTGAGCCACTaGACAAAACTCTTAGAGCACTATTTGAACGCATCT | + |
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Preference number: 6 (lower is better) Translates to: SMHFCILAEVSH*TKLLEHYLNAS Trigger: AGATGCGTTCAAATAGTGCTCTAAGAGTTTTGTTCAGTGGCTCACTTCGGCTAAAATGCAGAAATGCATGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000330295.10 ENST00000520337.1 ENST00000520880.1 |
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| CDS TCA 72 bp | CATTCTAGACTAGTTCTGTCCATTCGTATTGACTCTTaGCGTGTTTCTTTTCGAGCAACAGCAAACAGTATG | + |
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Preference number: 6 (lower is better) Translates to: HSRLVLSIRIDS*RVSFRATANSM Trigger: CATACTGTTTGCTGTTGCTCGAAAAGAAACACGTCAAGAGTCAATACGAATGGACAGAACTAGTCTAGAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520880.1 |
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| CDS TCA 72 bp | GTCCAAATAAATTATAGCTTCAATGGGAAGAGGTCCTaGACATTCAGCTCCATTGAATGTGAAATACCAACG | + |
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Preference number: 6 (lower is better) Translates to: VQINYSFNGKRS*TFSSIECEIPT Trigger: CGTTGGTATTTCACATTCAATGGAGCTGAATGTTCAGGACCTCTTCCCATTGAAGCTATAATTTATTTGGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000330295.10 ENST00000520337.1 ENST00000520880.1 |
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