RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CTDSPL (Homo sapiens)

Ensembl gene IDs: ENSG00000144677

Ensembl transcript IDs: ENST00000273179.10, ENST00000310189.3, ENST00000416688.5, ENST00000435525.1, ENST00000436654.1, ENST00000443503.6, ENST00000447745.5, ENST00000486978.5

Found 506 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGACCCTGCAGCATGCCACAGGTTGTCAGAGCAGTCACACCTGTTaGGGGACAGGCTCCTGTGACTCACTCCCCTCCCTCAGCACCCCC +
Preference number: 1 (lower is better)
Translates to: LTLQHATGCQSSHTC*GTGSCDSLPSLSTP
Trigger: GGGGGTGCTGAGGGAGGGGAGTGAGTCACAGGAGCCTGTCCCCCAACAGGTGTGACTGCTCTGACAACCTGTGGCATGCTGCAGGGTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR CCA 90 bp TGGTCAAATAAGGTGCACAGATTCCAGAACCCTCAGAGGGCCTGCTaGCCCTCTCCAGACATTCTGTGTCCGTGGTGCAGGAGCTGGGCC +
Preference number: 1 (lower is better)
Translates to: WSNKVHRFQNPQRAC*PSPDILCPWCRSWA
Trigger: GGCCCAGCTCCTGCACCACGGACACAGAATGTCTGGAGAGGGCCAGCAGGCCCTCTGAGGGTTCTGGAATCTGTGCACCTTATTTGACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR TCA 90 bp TGGGCTCTCCCTGTGGGAGCTCTTCCTCTCCCTGGTTTGGGGCAATaGGTCCCACATCTAGACAGGCTTCCCCAACCCTTGGCTCAGAAA +
Preference number: 1 (lower is better)
Translates to: WALPVGALPLPGLGQ*VPHLDRLPQPLAQK
Trigger: TTTCTGAGCCAAGGGTTGGGGAAGCCTGTCTAGATGTGGGACTCATTGCCCCAAACCAGGGAGAGGAAGAGCTCCCACAGGGAGAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
3UTR CCA 90 bp CAGTGGCCAATGCCAGGAAGGGGTTACAGGTGGTGGAGGCTGCAATaGGATGGGACACCTCTGTTTCTGACCCTGTCCGAGTTTGTAGCT +
Preference number: 1 (lower is better)
Translates to: QWPMPGRGYRWWRLQ*DGTPLFLTLSEFVA
Trigger: AGCTACAAACTCGGACAGGGTCAGAAACAGAGGTGTCCCATCCCATTGCAGCCTCCACCACCTGTAACCCCTTCCTGGCATTGGCCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
3UTR CCA 90 bp TGGCACTGCTTAAACACCAAACTGGGAAAGGCTGCAAAGAGAGCCTaGGCTCTCCCTGTGGGAGCTCTTCCTCTCCCTGGTTTGGGGCAA +
Preference number: 1 (lower is better)
Translates to: WHCLNTKLGKAAKRA*ALPVGALPLPGLGQ
Trigger: TTGCCCCAAACCAGGGAGAGGAAGAGCTCCCACAGGGAGAGCCCAGGCTCTCTTTGCAGCCTTTCCCAGTTTGGTGTTTAAGCAGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
3UTR GCA 90 bp GACATAGTCATGAAATCCTCCTATCAGGAGCCTGACCCTGCAGCATaGCACAGGTTGTCAGAGCAGTCACACCTGTTGGGGGACAGGCTC +
Preference number: 1 (lower is better)
Translates to: DIVMKSSYQEPDPAA*HRLSEQSHLLGDRL
Trigger: GAGCCTGTCCCCCAACAGGTGTGACTGCTCTGACAACCTGTGGCATGCTGCAGGGTCAGGCTCCTGATAGGAGGATTTCATGACTATGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR GCA 90 bp AAGTGGTGCTGTGGTCCTTTTGCCTTTGTACCCTTCAGTGGCCAATaGCAGGAAGGGGTTACAGGTGGTGGAGGCTGCAATGGGATGGGA +
Preference number: 1 (lower is better)
Translates to: KWCCGPFAFVPFSGQ*QEGVTGGGGCNGMG
Trigger: TCCCATCCCATTGCAGCCTCCACCACCTGTAACCCCTTCCTGGCATTGGCCACTGAAGGGTACAAAGGCAAAAGGACCACAGCACCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
3UTR GCA 90 bp TCACGGAAGCAGCAGAAGAAGGAGCTAAGGATGCTGCGGCTCCTCTaGTTCTTTAAGCTGACGTTGCACTGGGAGGCTTGGCCTCCCAAA +
Preference number: 1 (lower is better)
Translates to: SRKQQKKELRMLRLL*FFKLTLHWEAWPPK
Trigger: TTTGGGAGGCCAAGCCTCCCAGTGCAACGTCAGCTTAAAGAAGCAGAGGAGCCGCAGCATCCTTAGCTCCTTCTTCTGCTGCTTCCGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435525.1
3UTR GCA 90 bp GTTGGGTCAGCTGCTCTGAGCTGGGATAGAAGGGGACAGGTGGTCTaGTTGGAGGGGAGGACAGTTGAAAGGAAGTCTGATAGAGATCAA +
Preference number: 1 (lower is better)
Translates to: VGSAALSWDRRGQVV*LEGRTVERKSDRDQ
Trigger: TTGATCTCTATCAGACTTCCTTTCAACTGTCCTCCCCTCCAAGCAGACCACCTGTCCCCTTCTATCCCAGCTCAGAGCAGCTGACCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR CCA 90 bp ACTACCCGGGGTGGGGGAGGGTGTGTCAGTCTGCAGAGAAGCTCCTaGGAGAATGGAACAGGAACAGACATGATCAAAGTTACAGTACAG +
Preference number: 1 (lower is better)
Translates to: TTRGGGGCVSLQRSS*ENGTGTDMIKVTVQ
Trigger: CTGTACTGTAACTTTGATCATGTCTGTTCCTGTTCCATTCTCCCAGGAGCTTCTCTGCAGACTGACACACCCTCCCCCACCCCGGGTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR GCA 90 bp TTCCACTGGAGGCCTGGCCAGAGAAGTAATAACATCATAGTGGGCTaGAGTCCACAAACCCAAGGTGTCCTGTCCCAGAGCTCAATGTCA +
Preference number: 1 (lower is better)
Translates to: FHWRPGQRSNNIIVG*SPQTQGVLSQSSMS
Trigger: TGACATTGAGCTCTGGGACAGGACACCTTGGGTTTGTGGACTGCAGCCCACTATGATGTTATTACTTCTCTGGCCAGGCCTCCAGTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR TCA 90 bp CACTGGCTTAGTGCAGTGGTGCTCACAGTTTCAGGAACTACTAGGTaGAGTGTCTGGCTCAAGTCTGCCAAGTGTCTTCACTCCATCGTC +
Preference number: 1 (lower is better)
Translates to: HWLSAVVLTVSGTTR*SVWLKSAKCLHSIV
Trigger: GACGATGGAGTGAAGACACTTGGCAGACTTGAGCCAGACACTTCACCTAGTAGTTCCTGAAACTGTGAGCACCACTGCACTAAGCCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR CCA 90 bp TCAGAAATAGGCTGTGCTTCAAAGGAGAAGACCAAGAGATGGACTTaGGCCACATCAGCTTGGTGGCTGGTTGAGGCCACAGGTTCTCAA +
Preference number: 1 (lower is better)
Translates to: SEIGCASKEKTKRWT*ATSAWWLVEATGSQ
Trigger: TTGAGAACCTGTGGCCTCAACCAGCCACCAAGCTGATGTGGCCCAAGTCCATCTCTTGGTCTTCTCCTTTGAAGCACAGCCTATTTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
3UTR CCA 90 bp AGGAGAAGACCAAGAGATGGACTTGGGCCACATCAGCTTGGTGGCTaGTTGAGGCCACAGGTTCTCAAGAGAGAACAGTCAGCTTATTTA +
Preference number: 1 (lower is better)
Translates to: RRRPRDGLGPHQLGG*LRPQVLKREQSAYL
Trigger: TAAATAAGCTGACTGTTCTCTCTTGAGAACCTGTGGCCTCAACCAGCCACCAAGCTGATGTGGCCCAAGTCCATCTCTTGGTCTTCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
3UTR TCA 90 bp GAAGACCAAGAGATGGACTTGGGCCACATCAGCTTGGTGGCTGGTTaGGGCCACAGGTTCTCAAGAGAGAACAGTCAGCTTATTTATCAA +
Preference number: 1 (lower is better)
Translates to: EDQEMDLGHISLVAG*GHRFSRENSQLIYQ
Trigger: TTGATAAATAAGCTGACTGTTCTCTCTTGAGAACCTGTGGCCTCAACCAGCCACCAAGCTGATGTGGCCCAAGTCCATCTCTTGGTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
3UTR TCA 90 bp GAATGCTGGGAGACCTGTTTACCCCCTGAATACTTACTTCCCTTCTaGATATTCACACAGCAGTCCACAGACCAAAGTGCTGTTGGGAGG +
Preference number: 1 (lower is better)
Translates to: ECWETCLPPEYLLPF*IFTQQSTDQSAVGR
Trigger: CCTCCCAACAGCACTTTGGTCTGTGGACTGCTGTGTGAATATTCAGAAGGGAAGTAAGTATTCAGGGGGTAAACAGGTCTCCCAGCATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR CCA 90 bp TATTCTGAGCATAGGCACAGTGGCAAAGAACAGTGTAACAGCCGCTaGTCAATTCCATTTGGTGGCAGCGCGGTAGCAGCAAGGAAAATT +
Preference number: 1 (lower is better)
Translates to: YSEHRHSGKEQCNSR*SIPFGGSAVAARKI
Trigger: AATTTTCCTTGCTGCTACCGCGCTGCCACCAAATGGAATTGACCAGCGGCTGTTACACTGTTCTTTGCCACTGTGCCTATGCTCAGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR TCA 90 bp TACTGGTTTGGAACACTCAGAATGCTGGGAGACCTGTTTACCCCCTaGATACTTACTTCCCTTCTGAATATTCACACAGCAGTCCACAGA +
Preference number: 1 (lower is better)
Translates to: YWFGTLRMLGDLFTP*ILTSLLNIHTAVHR
Trigger: TCTGTGGACTGCTGTGTGAATATTCAGAAGGGAAGTAAGTATTCAGGGGGTAAACAGGTCTCCCAGCATTCTGAGTGTTCCAAACCAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR GCA 90 bp CTTACTTCCCTTCTGAATATTCACACAGCAGTCCACAGACCAAAGTaGTGTTGGGAGGATGTAATTGGCAGCTGGCTTCATTACTTTGTG +
Preference number: 1 (lower is better)
Translates to: LTSLLNIHTAVHRPK*CWEDVIGSWLHYFV
Trigger: CACAAAGTAATGAAGCCAGCTGCCAATTACATCCTCCCAACAGCACTTTGGTCTGTGGACTGCTGTGTGAATATTCAGAAGGGAAGTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR CCA 90 bp GGCATGGTTGAGGGTCTAAGGCTCTCATTAGGGCCTAATTCTGTGTaGATATCAACACATGACAGACACTTGACTGCAACATTCAAGACA +
Preference number: 1 (lower is better)
Translates to: GMVEGLRLSLGPNSV*ISTHDRHLTATFKT
Trigger: TGTCTTGAATGTTGCAGTCAAGTGTCTGTCATGTGTTGATATCCACACAGAATTAGGCCCTAATGAGAGCCTTAGACCCTCAACCATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR GCA 90 bp GATCAAAGTTACAGTACAGTAGGAACAGAGGCAGCCAGCCAATTTTaGACAGTTAACTGCAAGTACGTCAAGCCATTCACTCTTCTCGAA +
Preference number: 1 (lower is better)
Translates to: DQSYSTVGTEAASQF*TVNCKYVKPFTLLE
Trigger: TTCGAGAAGAGTGAATGGCTTGACGTACTTGCAGTTAACTGTGCAAAATTGGCTGGCTGCCTCTGTTCCTACTGTACTGTAACTTTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR CCA 90 bp TGTCTGGCTCAAGTCTGCCAAGTGTCTTCACTCCATCGTCAGAAGTaGAGCACTATCCCTAGGTTCGATTCCCATGAAATATTTTATGAT +
Preference number: 1 (lower is better)
Translates to: CLAQVCQVSSLHRQK*STIPRFDSHEIFYD
Trigger: ATCATAAAATATTTCATGGGAATCGAACCTAGGGATAGTGCTCCACTTCTGACGATGGAGTGAAGACACTTGGCAGACTTGAGCCAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR CCA 90 bp CATCAAAATTGCACCACGTCAAAGGAGCTTCCTCACCATCAACTGTaGCAGGTGGCATTCCTTTTTCAGTATGCAAATGCATTATTTACA +
Preference number: 1 (lower is better)
Translates to: HQNCTTSKELPHHQL*QVAFLFQYANALFT
Trigger: TGTAAATAATGCATTTGCATACTGAAAAAGGAATGCCACCTGCCACAGTTGATGGTGAGGAAGCTCCTTTGACGTGGTGCAATTTTGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR GCA 90 bp AGAGAGAACAGTCAGCTTATTTATCAAACAGGATCTGATACTGACTaGAGTTTAAAATCCATGCTACACCTAAGTGGTGCTGTGGTCCTT +
Preference number: 1 (lower is better)
Translates to: RENSQLIYQTGSDTD*SLKSMLHLSGAVVL
Trigger: AAGGACCACAGCACCACTTAGGTGTAGCATGGATTTTAAACTGCAGTCAGTATCAGATCCTGTTTGATAAATAAGCTGACTGTTCTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
3UTR-3UTR TCA 90 bp CTCTCCAGACATTCTGTGTCCGTGGTGCAGGAGCTGGGCCCGTCCCTAACAGCTGGGGACAGGCTCCTGTaGCTCACTCCCCTCCCTCAG +
Preference number: 2 (lower is better)
Translates to: LSRHSVSVVQELGPSLTAGDRLL*LTPLPQ
Trigger: CTGAGGGAGGGGAGTGAGTCACAGGAGCCTGTCCCC...AGCTGTTAGGGACGGGCCCAGCTCCTGCACCACGGACACAGAATGTCTGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR GCA 90 bp CAGCATCTCCACTACCCGGGGTGGGGGAGGGTGTGTCAGTCTGCAGAGAAGCTCCCAGAGGTTCCAGAGTaGACAGGCGGGAGGCAGGCA +
Preference number: 2 (lower is better)
Translates to: QHLHYPGWGRVCQSAEKLPEVPE*TGGRQA
Trigger: TGCCTGCCTCCCGCCTGTGCACTCTGGAACCTCTGG...GAGCTTCTCTGCAGACTGACACACCCTCCCCCACCCCGGGTAGTGGAGATGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR CCA 90 bp GACACCAGCATCTCCACTACCCGGGGTGGGGGAGGGTGTGTCAGTCTGCAGAGAGCCACATCAGCTTGGTaGCTGGTTGAGGCCACAGGT +
Preference number: 2 (lower is better)
Translates to: DTSISTTRGGGGCVSLQRATSAW*LVEATG
Trigger: ACCTGTGGCCTCAACCAGCCACCAAGCTGATGTGGC...TCTCTGCAGACTGACACACCCTCCCCCACCCCGGGTAGTGGAGATGCTGGTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR GCA 90 bp AGACCAAGAGATGGACTTGGGCCACATCAGCTTGGTGGCTGGTTGAGGCCACAGCCAGAGGTTCCAGAGTaGACAGGCGGGAGGCAGGCA +
Preference number: 2 (lower is better)
Translates to: RPRDGLGPHQLGGWLRPQPEVPE*TGGRQA
Trigger: TGCCTGCCTCCCGCCTGTGCACTCTGGAACCTCTGG...CTGTGGCCTCAACCAGCCACCAAGCTGATGTGGCCCAAGTCCATCTCTTGGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR GCA 90 bp CTCTCCAGACATTCTGTGTCCGTGGTGCAGGAGCTGGGCCCGTCCCTAACAGCTAGGGGACAGGTGGTCTaGTTGGAGGGGAGGACAGTT +
Preference number: 2 (lower is better)
Translates to: LSRHSVSVVQELGPSLTARGQVV*LEGRTV
Trigger: AACTGTCCTCCCCTCCAAGCAGACCACCTGTCCCCT...AGCTGTTAGGGACGGGCCCAGCTCCTGCACCACGGACACAGAATGTCTGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR CCA 90 bp CAGCATCTCCACTACCCGGGGTGGGGGAGGGTGTGTCAGTCTGCAGAGAAGCTCGAACACTCAGAATGCTaGGAGACCTGTTTACCCCCT +
Preference number: 2 (lower is better)
Translates to: QHLHYPGWGRVCQSAEKLEHSEC*ETCLPP
Trigger: AGGGGGTAAACAGGTCTCCCAGCATTCTGAGTGTTC...GAGCTTCTCTGCAGACTGACACACCCTCCCCCACCCCGGGTAGTGGAGATGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR TCA 90 bp GACACCAGCATCTCCACTACCCGGGGTGGGGGAGGGTGTGTCAGTCTGCAGAGAGACCTGTTTACCCCCTaGATACTTACTTCCCTTCTG +
Preference number: 2 (lower is better)
Translates to: DTSISTTRGGGGCVSLQRDLFTP*ILTSLL
Trigger: CAGAAGGGAAGTAAGTATTCAGGGGGTAAACAGGTC...TCTCTGCAGACTGACACACCCTCCCCCACCCCGGGTAGTGGAGATGCTGGTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR TCA 90 bp CTCAAGTCTGCCAAGTGTCTTCACTCCATCGTCAGAAGTGGAGCACTATCCCTACTCCTATCAGGAGCCTaGCCCTGCAGCATGCCACAG +
Preference number: 2 (lower is better)
Translates to: LKSAKCLHSIVRSGALSLLLSGA*PCSMPQ
Trigger: CTGTGGCATGCTGCAGGGTCAGGCTCCTGATAGGAG...TAGGGATAGTGCTCCACTTCTGACGATGGAGTGAAGACACTTGGCAGACTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR TCA 90 bp CTCTCCAGACATTCTGTGTCCGTGGTGCAGGAGCTGGGCCCGTCCCTAACAGCTGTGGATATCAACACATaGCAGACACTTGACTGCAAC +
Preference number: 2 (lower is better)
Translates to: LSRHSVSVVQELGPSLTAVDINT*QTLDCN
Trigger: GTTGCAGTCAAGTGTCTGTCATGTGTTGATATCCAC...AGCTGTTAGGGACGGGCCCAGCTCCTGCACCACGGACACAGAATGTCTGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR CCA 90 bp GCTTCCCCAACCCTTGGCTCAGAAATAGGCTGTGCTTCAAAGGAGAAGACCAAGGCCACATTCACCCTGTaGCCTGGAGCACGGAGTATC +
Preference number: 2 (lower is better)
Translates to: ASPTLGSEIGCASKEKTKATFTL*PGARSI
Trigger: GATACTCCGTGCTCCAGGCCACAGGGTGAATGTGGC...CTTGGTCTTCTCCTTTGAAGCACAGCCTATTTCTGAGCCAAGGGTTGGGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR CCA 90 bp TTTGGGGCAATGAGTCCCACATCTAGACAGGCTTCCCCAACCCTTGGCTCAGAAGGAAGGGGTTACAGGTaGTGGAGGCTGCAATGGGAT +
Preference number: 2 (lower is better)
Translates to: FGAMSPTSRQASPTLGSEGRGYR*WRLQWD
Trigger: ATCCCATTGCAGCCTCCACCACCTGTAACCCCTTCC...TTCTGAGCCAAGGGTTGGGGAAGCCTGTCTAGATGTGGGACTCATTGCCCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
3UTR-3UTR CCA 90 bp GACACCAGCATCTCCACTACCCGGGGTGGGGGAGGGTGTGTCAGTCTGCAGAGAATCAACTGTGGCAGGTaGCATTCCTTTTTCAGTATG +
Preference number: 2 (lower is better)
Translates to: DTSISTTRGGGGCVSLQRINCGR*HSFFSM
Trigger: CATACTGAAAAAGGAATGCCACCTGCCACAGTTGAT...TCTCTGCAGACTGACACACCCTCCCCCACCCCGGGTAGTGGAGATGCTGGTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR TCA 90 bp CAGCATCTCCACTACCCGGGGTGGGGGAGGGTGTGTCAGTCTGCAGAGAAGCTCTTCAAGGAGAAAATGTaGCCTCAAGACAAACTTGTC +
Preference number: 2 (lower is better)
Translates to: QHLHYPGWGRVCQSAEKLFKEKM*PQDKLV
Trigger: GACAAGTTTGTCTTGAGGTCACATTTTCTCCTTGAA...GAGCTTCTCTGCAGACTGACACACCCTCCCCCACCCCGGGTAGTGGAGATGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR GCA 90 bp CTCTCCAGACATTCTGTGTCCGTGGTGCAGGAGCTGGGCCCGTCCCTAACAGCTCTCAGAAATAGGCTGTaGTTCAAAGGAGAAGACCAA +
Preference number: 2 (lower is better)
Translates to: LSRHSVSVVQELGPSLTALRNRL*FKGEDQ
Trigger: TTGGTCTTCTCCTTTGAAGCACAGCCTATTTCTGAG...AGCTGTTAGGGACGGGCCCAGCTCCTGCACCACGGACACAGAATGTCTGGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR CCA 90 bp CAGCATCTCCACTACCCGGGGTGGGGGAGGGTGTGTCAGTCTGCAGAGAAGCTCGTCAAACAAGGAACATaGCACTGCTTAAACACCAAA +
Preference number: 2 (lower is better)
Translates to: QHLHYPGWGRVCQSAEKLVKQGT*HCLNTK
Trigger: TTTGGTGTTTAAGCAGTGCCATGTTCCTTGTTTGAC...GAGCTTCTCTGCAGACTGACACACCCTCCCCCACCCCGGGTAGTGGAGATGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR CCA 90 bp ATGCCAACTGTCCAGCACAGCACCTTTAAAAGCAGAGGCACAAACGTAGGATTGCCTCAGAGGGCCTGCTaGCCCTCTCCAGACATTCTG +
Preference number: 2 (lower is better)
Translates to: MPTVQHSTFKSRGTNVGLPQRAC*PSPDIL
Trigger: CAGAATGTCTGGAGAGGGCCAGCAGGCCCTCTGAGG...CAATCCTACGTTTGTGCCTCTGCTTTTAAAGGTGCTGTGCTGGACAGTTGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR TCA 90 bp GACTGCAGTTTAAAATCCATGCTACACCTAAGTGGTGCTGTGGTCCTTTTGCCTCTCCTATCAGGAGCCTaGCCCTGCAGCATGCCACAG +
Preference number: 2 (lower is better)
Translates to: DCSLKSMLHLSGAVVLLPLLSGA*PCSMPQ
Trigger: CTGTGGCATGCTGCAGGGTCAGGCTCCTGATAGGAG...AGGCAAAAGGACCACAGCACCACTTAGGTGTAGCATGGATTTTAAACTGCAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR CCA 90 bp CTCAAGTCTGCCAAGTGTCTTCACTCCATCGTCAGAAGTGGAGCACTATCCCTAATTCACCCTGTGGCCTaGAGCACGGAGTATCCTCAC +
Preference number: 2 (lower is better)
Translates to: LKSAKCLHSIVRSGALSLIHPVA*STEYPH
Trigger: GTGAGGATACTCCGTGCTCCAGGCCACAGGGTGAAT...TAGGGATAGTGCTCCACTTCTGACGATGGAGTGAAGACACTTGGCAGACTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR CCA 90 bp GCAAACCTTTTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTAGCAGTCACACCTGTTaGGGGACAGGCTCCTGTGAC +
Preference number: 2 (lower is better)
Translates to: ANLLIDNTRPWKRAHSACSSHTC*GTGSCD
Trigger: GTCACAGGAGCCTGTCCCCCAACAGGTGTGACTGCT...ACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR CCA 90 bp CTCAAGTCTGCCAAGTGTCTTCACTCCATCGTCAGAAGTGGAGCACTATCCCTACTGGTCAATTCCATTTaGTGGCAGCGCGGTAGCAGC +
Preference number: 2 (lower is better)
Translates to: LKSAKCLHSIVRSGALSLLVNSI*WQRGSS
Trigger: GCTGCTACCGCGCTGCCACCAAATGGAATTGACCAG...TAGGGATAGTGCTCCACTTCTGACGATGGAGTGAAGACACTTGGCAGACTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR CAA 90 bp GCATCATTAGGGCATCCTCGTGTCCCCAGAGACATCTCATCAAAATaGCACCACGTCAAAGGAGCTTCCTCACCATCAACTGTGGCAGGT +
Preference number: 2 (lower is better)
Translates to: ASLGHPRVPRDISSK*HHVKGASSPSTVAG
Trigger: ACCTGCCACAGTTGATGGTGAGGAAGCTCCTTTGACGTGGTGCAATTTTGATGAGATGTCTCTGGGGACACGAGGATGCCCTAATGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR TCA 90 bp GCAAACCTTTTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTCACCAGAATGCTGGCTaGAGACCAACCCACAGAGGA +
Preference number: 2 (lower is better)
Translates to: ANLLIDNTRPWKRAHSACHQNAG*RPTHRG
Trigger: TCCTCTGTGGGTTGGTCTTCAGCCAGCATTCTGGTG...ACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR TCA 90 bp ATGCCAACTGTCCAGCACAGCACCTTTAAAAGCAGAGGCACAAACGTAGGATTGCGAAGGGGGCATGGTTaGGGGTCTAAGGCTCTCATT +
Preference number: 2 (lower is better)
Translates to: MPTVQHSTFKSRGTNVGLRRGHG*GSKALI
Trigger: AATGAGAGCCTTAGACCCTCAACCATGCCCCCTTCG...CAATCCTACGTTTGTGCCTCTGCTTTTAAAGGTGCTGTGCTGGACAGTTGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR CCA 90 bp CTCTCCAGACATTCTGTGTCCGTGGTGCAGGAGCTGGGCCCGTCCCTAACAGCTAGATACATTCCAAACTaGGTCAAAAATGAGTGGAGA +
Preference number: 2 (lower is better)
Translates to: LSRHSVSVVQELGPSLTARYIPN*VKNEWR
Trigger: TCTCCACTCATTTTTGACCCAGTTTGGAATGTATCT...AGCTGTTAGGGACGGGCCCAGCTCCTGCACCACGGACACAGAATGTCTGGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR CCA 90 bp AAGGAGCTTCCTCACCATCAACTGTGGCAGGTGGCATTCCTTTTTCAGTATGCAAGCTCTTCCTCTCCCTaGTTTGGGGCAATGAGTCCC +
Preference number: 2 (lower is better)
Translates to: KELPHHQLWQVAFLFQYASSSSP*FGAMSP
Trigger: GGGACTCATTGCCCCAAACCAGGGAGAGGAAGAGCT...TGCATACTGAAAAAGGAATGCCACCTGCCACAGTTGATGGTGAGGAAGCTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR TCA 90 bp CTCAAGTCTGCCAAGTGTCTTCACTCCATCGTCAGAAGTGGAGCACTATCCCTAGTAGGAAAGAGATTCTaGGTTGGGTCAGCTGCTCTG +
Preference number: 2 (lower is better)
Translates to: LKSAKCLHSIVRSGALSLVGKRF*VGSAAL
Trigger: CAGAGCAGCTGACCCAACTCAGAATCTCTTTCCTAC...TAGGGATAGTGCTCCACTTCTGACGATGGAGTGAAGACACTTGGCAGACTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR TCA 90 bp CACAGGTTCTCAAGAGAGAACAGTCAGCTTATTTATCAAACAGGATCTGATACTGGGGACAGGCTCCTGTaGCTCACTCCCCTCCCTCAG +
Preference number: 2 (lower is better)
Translates to: HRFSRENSQLIYQTGSDTGDRLL*LTPLPQ
Trigger: CTGAGGGAGGGGAGTGAGTCACAGGAGCCTGTCCCC...AGTATCAGATCCTGTTTGATAAATAAGCTGACTGTTCTCTCTTGAGAACCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR GCA 90 bp GACTGCAGTTTAAAATCCATGCTACACCTAAGTGGTGCTGTGGTCCTTTTGCCTCCCTTCAGTGGCCAATaGCAGGAAGGGGTTACAGGT +
Preference number: 2 (lower is better)
Translates to: DCSLKSMLHLSGAVVLLPPFSGQ*QEGVTG
Trigger: ACCTGTAACCCCTTCCTGGCATTGGCCACTGAAGGG...AGGCAAAAGGACCACAGCACCACTTAGGTGTAGCATGGATTTTAAACTGCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
3UTR-3UTR CCA 90 bp ATGCCAACTGTCCAGCACAGCACCTTTAAAAGCAGAGGCACAAACGTAGGATTGTGGTGGAGGCTGCAATaGGATGGGACACCTCTGTTT +
Preference number: 2 (lower is better)
Translates to: MPTVQHSTFKSRGTNVGLWWRLQ*DGTPLF
Trigger: AAACAGAGGTGTCCCATCCCATTGCAGCCTCCACCA...CAATCCTACGTTTGTGCCTCTGCTTTTAAAGGTGCTGTGCTGGACAGTTGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR CCA 90 bp CTCTCCAGACATTCTGTGTCCGTGGTGCAGGAGCTGGGCCCGTCCCTAACAGCTAGACATTTAAGGCAGTaGGTTCATTTAATGACTACT +
Preference number: 2 (lower is better)
Translates to: LSRHSVSVVQELGPSLTARHLRQ*VHLMTT
Trigger: AGTAGTCATTAAATGAACCCACTGCCTTAAATGTCT...AGCTGTTAGGGACGGGCCCAGCTCCTGCACCACGGACACAGAATGTCTGGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR CAA 90 bp TGCAGTTTAAAATCCATGCTACACCTAAGTGGTGCTGTGGTCCTTTaGCCTTTGTACCCTTCAGTGGCCAATGCCAGGAAGGGGTTACAG +
Preference number: 2 (lower is better)
Translates to: CSLKSMLHLSGAVVL*PLYPSVANARKGLQ
Trigger: CTGTAACCCCTTCCTGGCATTGGCCACTGAAGGGTACAAAGGCAAAAGGACCACAGCACCACTTAGGTGTAGCATGGATTTTAAACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
3UTR CAA 90 bp AGAAGACCAAGAGATGGACTTGGGCCACATCAGCTTGGTGGCTGGTaGAGGCCACAGGTTCTCAAGAGAGAACAGTCAGCTTATTTATCA +
Preference number: 2 (lower is better)
Translates to: RRPRDGLGPHQLGGW*RPQVLKREQSAYLS
Trigger: TGATAAATAAGCTGACTGTTCTCTCTTGAGAACCTGTGGCCTCAACCAGCCACCAAGCTGATGTGGCCCAAGTCCATCTCTTGGTCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
3UTR-3UTR CCA 90 bp TGTCAAACAAGGAACATGGCACTGCTTAAACACCAAACTGGGAAAGGCTGCAAAATTCACCCTGTGGCCTaGAGCACGGAGTATCCTCAC +
Preference number: 2 (lower is better)
Translates to: CQTRNMALLKHQTGKGCKIHPVA*STEYPH
Trigger: GTGAGGATACTCCGTGCTCCAGGCCACAGGGTGAAT...TTTGCAGCCTTTCCCAGTTTGGTGTTTAAGCAGTGCCATGTTCCTTGTTTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR CCA 90 bp GCAAACCTTTTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTCAGTGTAACAGCCGCTaGTCAATTCCATTTGGTGGC +
Preference number: 2 (lower is better)
Translates to: ANLLIDNTRPWKRAHSACQCNSR*SIPFGG
Trigger: GCCACCAAATGGAATTGACCAGCGGCTGTTACACTG...ACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR CCA 90 bp AGAATTTTGGAGTGTGGTCAAATAAGGTGCACAGATTCCAGAACCCTCAGAGGGCTTTGTACCCTTCAGTaGCCAATGCCAGGAAGGGGT +
Preference number: 2 (lower is better)
Translates to: RILECGQIRCTDSRTLRGLCTLQ*PMPGRG
Trigger: ACCCCTTCCTGGCATTGGCCACTGAAGGGTACAAAG...CCCTCTGAGGGTTCTGGAATCTGTGCACCTTATTTGACCACACTCCAAAATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR GCA 90 bp GCAAACCTTTTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTTGTCTGGCTCAAGTCTaGCAAGTGTCTTCACTCCAT +
Preference number: 2 (lower is better)
Translates to: ANLLIDNTRPWKRAHSACCLAQV*QVSSLH
Trigger: ATGGAGTGAAGACACTTGGCAGACTTGAGCCAGACA...ACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR CCA 90 bp CTCTCATTAGGGCCTAATTCTGTGTGGATATCAACACATGACAGACACTTGACTTCAGCTGCTCTGAGCTaGGATAGAAGGGGACAGGTG +
Preference number: 2 (lower is better)
Translates to: LSLGPNSVWISTHDRHLTSAALS*DRRGQV
Trigger: CACCTGTCCCCTTCTATCCCAGCTCAGAGCAGCTGA...AGTCAAGTGTCTGTCATGTGTTGATATCCACACAGAATTAGGCCCTAATGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR CCA 90 bp AGAATTTTGGAGTGTGGTCAAATAAGGTGCACAGATTCCAGAACCCTCAGAGGGCATGCTACACCTAAGTaGTGCTGTGGTCCTTTTGCC +
Preference number: 2 (lower is better)
Translates to: RILECGQIRCTDSRTLRGHATPK*CCGPFA
Trigger: GGCAAAAGGACCACAGCACCACTTAGGTGTAGCATG...CCCTCTGAGGGTTCTGGAATCTGTGCACCTTATTTGACCACACTCCAAAATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR CCA 90 bp GCAAACCTTTTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTACTGGCTTAGTGCAGTaGTGCTCACAGTTTCAGGAA +
Preference number: 2 (lower is better)
Translates to: ANLLIDNTRPWKRAHSACTGLVQ*CSQFQE
Trigger: TTCCTGAAACTGTGAGCACCACTGCACTAAGCCAGT...ACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR TCA 90 bp ATGCCAACTGTCCAGCACAGCACCTTTAAAAGCAGAGGCACAAACGTAGGATTGGTGGATATCAACACATaGCAGACACTTGACTGCAAC +
Preference number: 2 (lower is better)
Translates to: MPTVQHSTFKSRGTNVGLVDINT*QTLDCN
Trigger: GTTGCAGTCAAGTGTCTGTCATGTGTTGATATCCAC...CAATCCTACGTTTGTGCCTCTGCTTTTAAAGGTGCTGTGCTGGACAGTTGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR GCA 90 bp GCATATTCTGAGCATAGGCACAGTGGCAAAGAACAGTGTAACAGCCGCTGGTCAGTTGAGCCACACAATTaGAGATACATTCCAAACTGG +
Preference number: 2 (lower is better)
Translates to: AYSEHRHSGKEQCNSRWSVEPHN*RYIPNW
Trigger: CCAGTTTGGAATGTATCTGCAATTGTGTGGCTCAAC...TGACCAGCGGCTGTTACACTGTTCTTTGCCACTGTGCCTATGCTCAGAATATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR GCA 90 bp AGTGGGCTGCAGTCCACAAACCCAAGGTGTCCTGTCCCAGAGCTCAATGTCAAAGGATCTGATACTGACTaGAGTTTAAAATCCATGCTA +
Preference number: 2 (lower is better)
Translates to: SGLQSTNPRCPVPELNVKGSDTD*SLKSML
Trigger: TAGCATGGATTTTAAACTGCAGTCAGTATCAGATCC...TTTGACATTGAGCTCTGGGACAGGACACCTTGGGTTTGTGGACTGCAGCCCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR GCA 90 bp GCAAACCTTTTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTCAAGGAACATGGCACTaGTTAAACACCAAACTGGGA +
Preference number: 2 (lower is better)
Translates to: ANLLIDNTRPWKRAHSACQGTWH*LNTKLG
Trigger: TCCCAGTTTGGTGTTTAAGCAGTGCCATGTTCCTTG...ACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR GCA 90 bp GCAAACCTTTTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTGTCCACAGACCAAAGTaGTGTTGGGAGGATGTAATT +
Preference number: 2 (lower is better)
Translates to: ANLLIDNTRPWKRAHSACVHRPK*CWEDVI
Trigger: AATTACATCCTCCCAACAGCACTTTGGTCTGTGGAC...ACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR GCA 90 bp CACAGGTTCTCAAGAGAGAACAGTCAGCTTATTTATCAAACAGGATCTGATACTCCCTTCAGTGGCCAATaGCAGGAAGGGGTTACAGGT +
Preference number: 2 (lower is better)
Translates to: HRFSRENSQLIYQTGSDTPFSGQ*QEGVTG
Trigger: ACCTGTAACCCCTTCCTGGCATTGGCCACTGAAGGG...AGTATCAGATCCTGTTTGATAAATAAGCTGACTGTTCTCTCTTGAGAACCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
3UTR-3UTR CCA 90 bp GCAAACCTTTTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTGGGCCTAATTCTGTGTaGATATCAACACATGACAGA +
Preference number: 2 (lower is better)
Translates to: ANLLIDNTRPWKRAHSACGPNSV*ISTHDR
Trigger: TCTGTCATGTGTTGATATCCACACAGAATTAGGCCC...ACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR TCA 90 bp AGAATTTTGGAGTGTGGTCAAATAAGGTGCACAGATTCCAGAACCCTCAGAGGGCACATGACAGACACTTaGCTGCAACATTCAAGACAT +
Preference number: 2 (lower is better)
Translates to: RILECGQIRCTDSRTLRGHMTDT*LQHSRH
Trigger: ATGTCTTGAATGTTGCAGTCAAGTGTCTGTCATGTG...CCCTCTGAGGGTTCTGGAATCTGTGCACCTTATTTGACCACACTCCAAAATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR CCA 90 bp AAGGAGCTTCCTCACCATCAACTGTGGCAGGTGGCATTCCTTTTTCAGTATGCAGTCAAACAAGGAACATaGCACTGCTTAAACACCAAA +
Preference number: 2 (lower is better)
Translates to: KELPHHQLWQVAFLFQYAVKQGT*HCLNTK
Trigger: TTTGGTGTTTAAGCAGTGCCATGTTCCTTGTTTGAC...TGCATACTGAAAAAGGAATGCCACCTGCCACAGTTGATGGTGAGGAAGCTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR CCA 90 bp AGAATTTTGGAGTGTGGTCAAATAAGGTGCACAGATTCCAGAACCCTCAGAGGGAGAGGACTAAGGCAATaGTGCCAATATGAAAGGGTT +
Preference number: 2 (lower is better)
Translates to: RILECGQIRCTDSRTLRGRGLRQ*CQYERV
Trigger: AACCCTTTCATATTGGCACCATTGCCTTAGTCCTCT...CCCTCTGAGGGTTCTGGAATCTGTGCACCTTATTTGACCACACTCCAAAATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR TCA 90 bp GCAAACCTTTTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTAAAGATATTTTACTTTaGCCCCCGATTTCCAGTCTT +
Preference number: 2 (lower is better)
Translates to: ANLLIDNTRPWKRAHSACKDILL*PPISSL
Trigger: AAGACTGGAAATCGGGGGTCAAAGTAAAATATCTTT...ACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR GCA 90 bp CACAGGTTCTCAAGAGAGAACAGTCAGCTTATTTATCAAACAGGATCTGATACTGCAAACCCAGTAAAATaGATGTCCCTTTATGAAATT +
Preference number: 2 (lower is better)
Translates to: HRFSRENSQLIYQTGSDTANPVK*MSLYEI
Trigger: AATTTCATAAAGGGACATGCATTTTACTGGGTTTGC...AGTATCAGATCCTGTTTGATAAATAAGCTGACTGTTCTCTCTTGAGAACCTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR CAA 90 bp CAGCATCTCCACTACCCGGGGTGGGGGAGGGTGTGTCAGTCTGCAGAGAAGCTCGGACAGGTGGTCTGCTaGGAGGGGAGGACAGTTGAA +
Preference number: 3 (lower is better)
Translates to: QHLHYPGWGRVCQSAEKLGQVVC*EGRTVE
Trigger: TTCAACTGTCCTCCCCTCCAAGCAGACCACCTGTCC...GAGCTTCTCTGCAGACTGACACACCCTCCCCCACCCCGGGTAGTGGAGATGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR CAA 90 bp GACACCAGCATCTCCACTACCCGGGGTGGGGGAGGGTGTGTCAGTCTGCAGAGACAGCTTGGTGGCTGGTaGAGGCCACAGGTTCTCAAG +
Preference number: 3 (lower is better)
Translates to: DTSISTTRGGGGCVSLQRQLGGW*RPQVLK
Trigger: CTTGAGAACCTGTGGCCTCAACCAGCCACCAAGCTG...TCTCTGCAGACTGACACACCCTCCCCCACCCCGGGTAGTGGAGATGCTGGTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR CCA 72 bp CAGCATGCCACAGGTTGTCAGAGCAGTCACACCTGTTaGGGGACAGGCTCCTGTGACTCACTCCCCTCCCTC +
Preference number: 3 (lower is better)
Translates to: QHATGCQSSHTC*GTGSCDSLPSL
Trigger: GAGGGAGGGGAGTGAGTCACAGGAGCCTGTCCCCCAACAGGTGTGACTGCTCTGACAACCTGTGGCATGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR CCA 72 bp GTGCAGGAGCTGGGCCCGTCCCTAACAGCTCCGCACTaGCTTAGTGCAGTGGTGCTCACAGTTTCAGGAACT +
Preference number: 3 (lower is better)
Translates to: VQELGPSLTAPH*LSAVVLTVSGT
Trigger: AGTTCCTGAAACTGTGAGCACCACTGCACTAAGCCAGTGCGGAGCTGTTAGGGACGGGCCCAGCTCCTGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR TCA 72 bp CCTGTGGGAGCTCTTCCTCTCCCTGGTTTGGGGCAATaGGTCCCACATCTAGACAGGCTTCCCCAACCCTTG +
Preference number: 3 (lower is better)
Translates to: PVGALPLPGLGQ*VPHLDRLPQPL
Trigger: CAAGGGTTGGGGAAGCCTGTCTAGATGTGGGACTCATTGCCCCAAACCAGGGAGAGGAAGAGCTCCCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
3UTR CCA 72 bp AAAACAGGTAGGCATGGCCACATTCACCCTGTGGCCTaGAGCACGGAGTATCCTCACTTTCAGCTCCCAGGG +
Preference number: 3 (lower is better)
Translates to: KTGRHGHIHPVA*STEYPHFQLPG
Trigger: CCCTGGGAGCTGAAAGTGAGGATACTCCGTGCTCCAGGCCACAGGGTGAATGTGGCCATGCCTACCTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR GCA 72 bp ATGAAATCCTCCTATCAGGAGCCTGACCCTGCAGCATaGCACAGGTTGTCAGAGCAGTCACACCTGTTGGGG +
Preference number: 3 (lower is better)
Translates to: MKSSYQEPDPAA*HRLSEQSHLLG
Trigger: CCCCAACAGGTGTGACTGCTCTGACAACCTGTGGCATGCTGCAGGGTCAGGCTCCTGATAGGAGGATTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR CCA 72 bp GGCTGTGCTTCAAAGGAGAAGACCAAGAGATGGACTTaGGCCACATCAGCTTGGTGGCTGGTTGAGGCCACA +
Preference number: 3 (lower is better)
Translates to: GCASKEKTKRWT*ATSAWWLVEAT
Trigger: TGTGGCCTCAACCAGCCACCAAGCTGATGTGGCCCAAGTCCATCTCTTGGTCTTCTCCTTTGAAGCACAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
3UTR TCA 72 bp GAGATGGACTTGGGCCACATCAGCTTGGTGGCTGGTTaGGGCCACAGGTTCTCAAGAGAGAACAGTCAGCTT +
Preference number: 3 (lower is better)
Translates to: EMDLGHISLVAG*GHRFSRENSQL
Trigger: AAGCTGACTGTTCTCTCTTGAGAACCTGTGGCCTCAACCAGCCACCAAGCTGATGTGGCCCAAGTCCATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
3UTR GCA 72 bp AGGCCTGGCCAGAGAAGTAATAACATCATAGTGGGCTaGAGTCCACAAACCCAAGGTGTCCTGTCCCAGAGC +
Preference number: 3 (lower is better)
Translates to: RPGQRSNNIIVG*SPQTQGVLSQS
Trigger: GCTCTGGGACAGGACACCTTGGGTTTGTGGACTGCAGCCCACTATGATGTTATTACTTCTCTGGCCAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR CCA 72 bp CATAGGCACAGTGGCAAAGAACAGTGTAACAGCCGCTaGTCAATTCCATTTGGTGGCAGCGCGGTAGCAGCA +
Preference number: 3 (lower is better)
Translates to: HRHSGKEQCNSR*SIPFGGSAVAA
Trigger: TGCTGCTACCGCGCTGCCACCAAATGGAATTGACCAGCGGCTGTTACACTGTTCTTTGCCACTGTGCCTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR CCA 72 bp GAGAAGACCAAGAGATGGACTTGGGCCACATCAGCTTaGTGGCTGGTTGAGGCCACAGGTTCTCAAGAGAGA +
Preference number: 3 (lower is better)
Translates to: EKTKRWTWATSA*WLVEATGSQER
Trigger: TCTCTCTTGAGAACCTGTGGCCTCAACCAGCCACCAAGCTGATGTGGCCCAAGTCCATCTCTTGGTCTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
3UTR TCA 72 bp CTTGTTAATGCCAGTCACTCCCACCAGAATGCTGGCTaGAGACCAACCCACAGAGGACTAAGGCAATGGTGC +
Preference number: 3 (lower is better)
Translates to: LVNASHSHQNAG*RPTHRGLRQWC
Trigger: GCACCATTGCCTTAGTCCTCTGTGGGTTGGTCTTCAGCCAGCATTCTGGTGGGAGTGACTGGCATTAACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR CCA 72 bp AAAACAAAACAGGTAGGCATGGCCACATTCACCCTGTaGCCTGGAGCACGGAGTATCCTCACTTTCAGCTCC +
Preference number: 3 (lower is better)
Translates to: KTKQVGMATFTL*PGARSILTFSS
Trigger: GGAGCTGAAAGTGAGGATACTCCGTGCTCCAGGCCACAGGGTGAATGTGGCCATGCCTACCTGTTTTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR CCA 72 bp GGTGGGGGAGGGTGTGTCAGTCTGCAGAGAAGCTCCTaGGAGAATGGAACAGGAACAGACATGATCAAAGTT +
Preference number: 3 (lower is better)
Translates to: GGGGCVSLQRSS*ENGTGTDMIKV
Trigger: AACTTTGATCATGTCTGTTCCTGTTCCATTCTCCCAGGAGCTTCTCTGCAGACTGACACACCCTCCCCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR CAA 90 bp TTTGGGGCAATGAGTCCCACATCTAGACAGGCTTCCCCAACCCTTGGCTCAGAATGGAGGGGAGGACAGTaGAAAGGAAGTCTGATAGAG +
Preference number: 3 (lower is better)
Translates to: FGAMSPTSRQASPTLGSEWRGGQ*KGSLIE
Trigger: CTCTATCAGACTTCCTTTCAACTGTCCTCCCCTCCA...TTCTGAGCCAAGGGTTGGGGAAGCCTGTCTAGATGTGGGACTCATTGCCCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR CAA 90 bp AAGGAGCTTCCTCACCATCAACTGTGGCAGGTGGCATTCCTTTTTCAGTATGCAGCAGCATGCCACAGGTaGTCAGAGCAGTCACACCTG +
Preference number: 3 (lower is better)
Translates to: KELPHHQLWQVAFLFQYAAACHR*SEQSHL
Trigger: CAGGTGTGACTGCTCTGACAACCTGTGGCATGCTGC...TGCATACTGAAAAAGGAATGCCACCTGCCACAGTTGATGGTGAGGAAGCTCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR CAA 90 bp CTCTCCAGACATTCTGTGTCCGTGGTGCAGGAGCTGGGCCCGTCCCTAACAGCTGACCTCAAGACAAACTaGTCACCATCAGAAATAATA +
Preference number: 3 (lower is better)
Translates to: LSRHSVSVVQELGPSLTADLKTN*SPSEII
Trigger: TATTATTTCTGATGGTGACAAGTTTGTCTTGAGGTC...AGCTGTTAGGGACGGGCCCAGCTCCTGCACCACGGACACAGAATGTCTGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR CAA 90 bp GCAAACCTTTTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTGACCAAGAGATGGACTaGGGCCACATCAGCTTGGTG +
Preference number: 3 (lower is better)
Translates to: ANLLIDNTRPWKRAHSACDQEMD*GHISLV
Trigger: CACCAAGCTGATGTGGCCCAAGTCCATCTCTTGGTC...ACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR CAA 90 bp CTCTCCAGACATTCTGTGTCCGTGGTGCAGGAGCTGGGCCCGTCCCTAACAGCTACTTTACAGACTGTCTaGTTGTCAAACAAGGAACAT +
Preference number: 3 (lower is better)
Translates to: LSRHSVSVVQELGPSLTATLQTV*LSNKEH
Trigger: ATGTTCCTTGTTTGACAACAAGACAGTCTGTAAAGT...AGCTGTTAGGGACGGGCCCAGCTCCTGCACCACGGACACAGAATGTCTGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR GCA 72 bp GGCATCCTCGTGTCCCCAGAGACATCTCATCAAAATTaGACCACGTCAAAGGAGCTTCCTCACCATCAACTG +
Preference number: 3 (lower is better)
Translates to: GILVSPETSHQN*TTSKELPHHQL
Trigger: CAGTTGATGGTGAGGAAGCTCCTTTGACGTGGTGCAATTTTGATGAGATGTCTCTGGGGACACGAGGATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR GCA 72 bp GTACGTCAAGCCATTCACTCTTCTCGAACCCTGGCATaGCAACTGTCCAGCACAGCACCTTTAAAAGCAGAG +
Preference number: 3 (lower is better)
Translates to: VRQAIHSSRTLA*QLSSTAPLKAE
Trigger: CTCTGCTTTTAAAGGTGCTGTGCTGGACAGTTGGCATGCCAGGGTTCGAGAAGAGTGAATGGCTTGACGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR TCA 72 bp AGTGCAGTGGTGCTCACAGTTTCAGGAACTACTAGGTaGAGTGTCTGGCTCAAGTCTGCCAAGTGTCTTCAC +
Preference number: 3 (lower is better)
Translates to: SAVVLTVSGTTR*SVWLKSAKCLH
Trigger: GTGAAGACACTTGGCAGACTTGAGCCAGACACTTCACCTAGTAGTTCCTGAAACTGTGAGCACCACTGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR CCA 72 bp GGCATGTGGATTACTGGTTTGGAACACTCAGAATGCTaGGAGACCTGTTTACCCCCTGAATACTTACTTCCC +
Preference number: 3 (lower is better)
Translates to: GMWITGLEHSEC*ETCLPPEYLLP
Trigger: GGGAAGTAAGTATTCAGGGGGTAAACAGGTCTCCCAGCATTCTGAGTGTTCCAAACCAGTAATCCACATGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR CCA 72 bp TGCACCACGTCAAAGGAGCTTCCTCACCATCAACTGTaGCAGGTGGCATTCCTTTTTCAGTATGCAAATGCA +
Preference number: 3 (lower is better)
Translates to: CTTSKELPHHQL*QVAFLFQYANA
Trigger: TGCATTTGCATACTGAAAAAGGAATGCCACCTGCCACAGTTGATGGTGAGGAAGCTCCTTTGACGTGGTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR TCA 72 bp ATTCAAAAGGCACTTCATCCTGTAGGAAAGAGATTCTaGGTTGGGTCAGCTGCTCTGAGCTGGGATAGAAGG +
Preference number: 3 (lower is better)
Translates to: IQKALHPVGKRF*VGSAALSWDRR
Trigger: CCTTCTATCCCAGCTCAGAGCAGCTGACCCAACTCAGAATCTCTTTCCTACAGGATGAAGTGCCTTTTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR GCA 72 bp CTTCTGAATATTCACACAGCAGTCCACAGACCAAAGTaGTGTTGGGAGGATGTAATTGGCAGCTGGCTTCAT +
Preference number: 3 (lower is better)
Translates to: LLNIHTAVHRPK*CWEDVIGSWLH
Trigger: ATGAAGCCAGCTGCCAATTACATCCTCCCAACAGCACTTTGGTCTGTGGACTGCTGTGTGAATATTCAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR CCA 72 bp CAAGTCTGCCAAGTGTCTTCACTCCATCGTCAGAAGTaGAGCACTATCCCTAGGTTCGATTCCCATGAAATA +
Preference number: 3 (lower is better)
Translates to: QVCQVSSLHRQK*STIPRFDSHEI
Trigger: TATTTCATGGGAATCGAACCTAGGGATAGTGCTCCACTTCTGACGATGGAGTGAAGACACTTGGCAGACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR TCA 72 bp GAGACCTGTTTACCCCCTGAATACTTACTTCCCTTCTaGATATTCACACAGCAGTCCACAGACCAAAGTGCT +
Preference number: 3 (lower is better)
Translates to: ETCLPPEYLLPF*IFTQQSTDQSA
Trigger: AGCACTTTGGTCTGTGGACTGCTGTGTGAATATTCAGAAGGGAAGTAAGTATTCAGGGGGTAAACAGGTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR TCA 72 bp GGAACACTCAGAATGCTGGGAGACCTGTTTACCCCCTaGATACTTACTTCCCTTCTGAATATTCACACAGCA +
Preference number: 3 (lower is better)
Translates to: GTLRMLGDLFTP*ILTSLLNIHTA
Trigger: TGCTGTGTGAATATTCAGAAGGGAAGTAAGTATTCAGGGGGTAAACAGGTCTCCCAGCATTCTGAGTGTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR CCA 72 bp GAGGGTCTAAGGCTCTCATTAGGGCCTAATTCTGTGTaGATATCAACACATGACAGACACTTGACTGCAACA +
Preference number: 3 (lower is better)
Translates to: EGLRLSLGPNSV*ISTHDRHLTAT
Trigger: TGTTGCAGTCAAGTGTCTGTCATGTGTTGATATCCACACAGAATTAGGCCCTAATGAGAGCCTTAGACCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR GCA 72 bp ACAGACTGTCTTGTTGTCAAACAAGGAACATGGCACTaGTTAAACACCAAACTGGGAAAGGCTGCAAAGAGA +
Preference number: 3 (lower is better)
Translates to: TDCLVVKQGTWH*LNTKLGKAAKR
Trigger: TCTCTTTGCAGCCTTTCCCAGTTTGGTGTTTAAGCAGTGCCATGTTCCTTGTTTGACAACAAGACAGTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR GCA 72 bp ATTGGCATGTGGATTACTGGTTTGGAACACTCAGAATaGTGGGAGACCTGTTTACCCCCTGAATACTTACTT +
Preference number: 3 (lower is better)
Translates to: IGMWITGLEHSE*WETCLPPEYLL
Trigger: AAGTAAGTATTCAGGGGGTAAACAGGTCTCCCAGCATTCTGAGTGTTCCAAACCAGTAATCCACATGCCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR CAA 90 bp CTCTCATTAGGGCCTAATTCTGTGTGGATATCAACACATGACAGACACTTGACTTTACAGACTGTCTTGTaGTCAAACAAGGAACATGGC +
Preference number: 3 (lower is better)
Translates to: LSLGPNSVWISTHDRHLTLQTVL*SNKEHG
Trigger: GCCATGTTCCTTGTTTGACAACAAGACAGTCTGTAA...AGTCAAGTGTCTGTCATGTGTTGATATCCACACAGAATTAGGCCCTAATGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR-3UTR CAA 90 bp CTCTCATTAGGGCCTAATTCTGTGTGGATATCAACACATGACAGACACTTGACTTTGTTTCCTAAAGTGTaGAGCCACACAATTGCAGAT +
Preference number: 3 (lower is better)
Translates to: LSLGPNSVWISTHDRHLTLFPKV*SHTIAD
Trigger: ATCTGCAATTGTGTGGCTCAACACTTTAGGAAACAA...AGTCAAGTGTCTGTCATGTGTTGATATCCACACAGAATTAGGCCCTAATGAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR TCA 72 bp CTAATTCTGTGTGGATATCAACACATGACAGACACTTaGCTGCAACATTCAAGACATTTAAGGCAGTGGGTT +
Preference number: 3 (lower is better)
Translates to: LILCGYQHMTDT*LQHSRHLRQWV
Trigger: AACCCACTGCCTTAAATGTCTTGAATGTTGCAGTCAAGTGTCTGTCATGTGTTGATATCCACACAGAATTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR GCA 72 bp AGTCAGCTTATTTATCAAACAGGATCTGATACTGACTaGAGTTTAAAATCCATGCTACACCTAAGTGGTGCT +
Preference number: 3 (lower is better)
Translates to: SQLIYQTGSDTD*SLKSMLHLSGA
Trigger: AGCACCACTTAGGTGTAGCATGGATTTTAAACTGCAGTCAGTATCAGATCCTGTTTGATAAATAAGCTGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
3UTR CCA 72 bp AGTATGCAAATGCATTATTTACAAACAGCTAATGCATaGAACCACAGACCAACACGTAGGATTCCAGAACAA +
Preference number: 3 (lower is better)
Translates to: SMQMHYLQTANA*NHRPTRRIPEQ
Trigger: TTGTTCTGGAATCCTACGTGTTGGTCTGTGGTTCCATGCATTAGCTGTTTGTAAATAATGCATTTGCATACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR TCA 72 bp AGAAGTGACAGGATGTCACTTTTCAAGGAGAAAATGTaGCCTCAAGACAAACTTGTCACCATCAGAAATAAT +
Preference number: 3 (lower is better)
Translates to: RSDRMSLFKEKM*PQDKLVTIRNN
Trigger: ATTATTTCTGATGGTGACAAGTTTGTCTTGAGGTCACATTTTCTCCTTGAAAAGTGACATCCTGTCACTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp CCCTGGTTTGGGGCAATGAGTCCCACATCTAGACAGGCTTCCCCAACCCTTGGCGCCGCCTCGTCACCATaGACCCCGGAGCCGCGCCCG +
Preference number: 4 (lower is better)
Translates to: PWFGAMSPTSRQASPTLGAASSP*TPEPRP
Trigger: CGGGCGCGGCTCCGGGGTTCATGGTGACGAGGCGGC...GCCAAGGGTTGGGGAAGCCTGTCTAGATGTGGGACTCATTGCCCCAAACCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273179.10
CDS-3UTR GCA 90 bp TGGACTTGGGCCACATCAGCTTGGTGGCTGGTTGAGGCCACAGGTTCTCAAGAGGAAGCACACTGGGGCTaGTGGGTGGAGGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: WTWATSAWWLVEATGSQEEAHWG*WVEGPP
Trigger: TGGAGGCCCCTCCACCCAGCAGCCCCAGTGTGCTTC...CTCTTGAGAACCTGTGGCCTCAACCAGCCACCAAGCTGATGTGGCCCAAGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp GACACCAGCATCTCCACTACCCGGGGTGGGGGAGGGTGTGTCAGTCTGCAGAGATTAGCTGGTGGCTTCTaGAGCCCACCATTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: DTSISTTRGGGGCVSLQRLAGGF*SPPFSS
Trigger: GGAGGAGAATGGTGGGCTTCAGAAGCCACCAGCTAA...TCTCTGCAGACTGACACACCCTCCCCCACCCCGGGTAGTGGAGATGCTGGTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000443503.6
CDS-3UTR GCA 90 bp CCCTGGTTTGGGGCAATGAGTCCCACATCTAGACAGGCTTCCCCAACCCTTGGCAGGGGACAGGTGGTCTaGTTGGAGGGGAGGACAGTT +
Preference number: 4 (lower is better)
Translates to: PWFGAMSPTSRQASPTLGRGQVV*LEGRTV
Trigger: AACTGTCCTCCCCTCCAAGCAGACCACCTGTCCCCT...GCCAAGGGTTGGGGAAGCCTGTCTAGATGTGGGACTCATTGCCCCAAACCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp TCTCCCTGGTTTGGGGCAATGAGTCCCACATCTAGACAGGCTTCCCCAACCCTTATTCTGTGTCCGTGGTaGAGGAGCTGGGCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: SPWFGAMSPTSRQASPTLILCPW*RSWARP
Trigger: GGGACGGGCCCAGCTCCTGCACCACGGACACAGAAT...AAGGGTTGGGGAAGCCTGTCTAGATGTGGGACTCATTGCCCCAAACCAGGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp CTCTCCAGACATTCTGTGTCCGTGGTGCAGGAGCTGGGCCCGTCCCTAACAGCTCTAACAGCTCCGCACTaGCTTAGTGCAGTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: LSRHSVSVVQELGPSLTALTAPH*LSAVVL
Trigger: GAGCACCACTGCACTAAGCCAGTGCGGAGCTGTTAG...AGCTGTTAGGGACGGGCCCAGCTCCTGCACCACGGACACAGAATGTCTGGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp AGAGATGGACTTGGGCCACATCAGCTTGGTGGCTGGTTGAGGCCACAGGTTCTCGACATTCTGTGTCCGTaGTGCAGGAGCTGGGCCCGT +
Preference number: 4 (lower is better)
Translates to: RDGLGPHQLGGWLRPQVLDILCP*CRSWAR
Trigger: ACGGGCCCAGCTCCTGCACCACGGACACAGAATGTC...GAGAACCTGTGGCCTCAACCAGCCACCAAGCTGATGTGGCCCAAGTCCATCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp CAGCATCTCCACTACCCGGGGTGGGGGAGGGTGTGTCAGTCTGCAGAGAAGCTCTCTGCTTCTTTAAGCTaGCGTTGCACTGGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: QHLHYPGWGRVCQSAEKLSASLS*RCTGRL
Trigger: AAGCCTCCCAGTGCAACGTCAGCTTAAAGAAGCAGA...GAGCTTCTCTGCAGACTGACACACCCTCCCCCACCCCGGGTAGTGGAGATGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp AGAGATGGACTTGGGCCACATCAGCTTGGTGGCTGGTTGAGGCCACAGGTTCTCCTCTGGTCACCCTTCTaGAGCCCACCATTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RDGLGPHQLGGWLRPQVLLWSPF*SPPFSS
Trigger: GGAGGAGAATGGTGGGCTTCAGAAGGGTGACCAGAG...GAGAACCTGTGGCCTCAACCAGCCACCAAGCTGATGTGGCCCAAGTCCATCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273179.10
CDS-3UTR TCA 90 bp AGAGATGGACTTGGGCCACATCAGCTTGGTGGCTGGTTGAGGCCACAGGTTCTCCCTCAAAGAAGGGGATaGGGTCCAGCAGCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: RDGLGPHQLGGWLRPQVLPQRRG*GPAAPC
Trigger: ACACGGAGCTGCTGGACCTCATCCCCTTCTTTGAGG...GAGAACCTGTGGCCTCAACCAGCCACCAAGCTGATGTGGCCCAAGTCCATCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR TCA 90 bp CCCTGGTTTGGGGCAATGAGTCCCACATCTAGACAGGCTTCCCCAACCCTTGGCCCTGGTTTGGGGCAATaGGTCCCACATCTAGACAGG +
Preference number: 4 (lower is better)
Translates to: PWFGAMSPTSRQASPTLGPGLGQ*VPHLDR
Trigger: CCTGTCTAGATGTGGGACTCATTGCCCCAAACCAGG...GCCAAGGGTTGGGGAAGCCTGTCTAGATGTGGGACTCATTGCCCCAAACCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR GCA 90 bp CCCTGGTTTGGGGCAATGAGTCCCACATCTAGACAGGCTTCCCCAACCCTTGGCTCTCGAACCCTGGCATaGCAACTGTCCAGCACAGCA +
Preference number: 4 (lower is better)
Translates to: PWFGAMSPTSRQASPTLGSRTLA*QLSSTA
Trigger: TGCTGTGCTGGACAGTTGGCATGCCAGGGTTCGAGA...GCCAAGGGTTGGGGAAGCCTGTCTAGATGTGGGACTCATTGCCCCAAACCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp CTAAGGATGCTGCGGCTCCTCTGCTTCTTTAAGCTGACGTTGCACTGGGAGGCTACTGGGGCTGCTGGGTaGAGGGGCCTCCACATTGTA +
Preference number: 4 (lower is better)
Translates to: LRMLRLLCFFKLTLHWEATGAAG*RGLHIV
Trigger: TACAATGTGGAGGCCCCTCCACCCAGCAGCCCCAGT...AGCCTCCCAGTGCAACGTCAGCTTAAAGAAGCAGAGGAGCCGCAGCATCCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435525.1
CDS-3UTR CCA 90 bp TGGACTTGGGCCACATCAGCTTGGTGGCTGGTTGAGGCCACAGGTTCTCAAGAGAGCAGTCACACCTGTTaGGGGACAGGCTCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: WTWATSAWWLVEATGSQESSHTC*GTGSCD
Trigger: GTCACAGGAGCCTGTCCCCCAACAGGTGTGACTGCT...CTCTTGAGAACCTGTGGCCTCAACCAGCCACCAAGCTGATGTGGCCCAAGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp AGACCAAGAGATGGACTTGGGCCACATCAGCTTGGTGGCTGGTTGAGGCCACAGGCCACATCAGCTTGGTaGCTGGTTGAGGCCACAGGT +
Preference number: 4 (lower is better)
Translates to: RPRDGLGPHQLGGWLRPQATSAW*LVEATG
Trigger: ACCTGTGGCCTCAACCAGCCACCAAGCTGATGTGGC...CTGTGGCCTCAACCAGCCACCAAGCTGATGTGGCCCAAGTCCATCTCTTGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CCA 90 bp TCTCCCTGGTTTGGGGCAATGAGTCCCACATCTAGACAGGCTTCCCCAACCCTTCCTCAGAGGGCCTGCTaGCCCTCTCCAGACATTCTG +
Preference number: 4 (lower is better)
Translates to: SPWFGAMSPTSRQASPTLPQRAC*PSPDIL
Trigger: CAGAATGTCTGGAGAGGGCCAGCAGGCCCTCTGAGG...AAGGGTTGGGGAAGCCTGTCTAGATGTGGGACTCATTGCCCCAAACCAGGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp TGTGGGAGCTCTTCCTCTCCCTGGTTTGGGGCAATGAGTCCCACATCTAGACAGCCTCAAAGAAGGGGATaGGGTCCAGCAGCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: CGSSSSPWFGAMSPTSRQPQRRG*GPAAPC
Trigger: ACACGGAGCTGCTGGACCTCATCCCCTTCTTTGAGG...CTGTCTAGATGTGGGACTCATTGCCCCAAACCAGGGAGAGGAAGAGCTCCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR TCA 90 bp GTGGTCCTTTTGCCTTTGTACCCTTCAGTGGCCAATGCCAGGAAGGGGTTACAGCTCCTATCAGGAGCCTaGCCCTGCAGCATGCCACAG +
Preference number: 4 (lower is better)
Translates to: VVLLPLYPSVANARKGLQLLSGA*PCSMPQ
Trigger: CTGTGGCATGCTGCAGGGTCAGGCTCCTGATAGGAG...CTGTAACCCCTTCCTGGCATTGGCCACTGAAGGGTACAAAGGCAAAAGGACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp CTCTCCAGACATTCTGTGTCCGTGGTGCAGGAGCTGGGCCCGTCCCTAACAGCTTCCAGCAGAAATCCATaGCTACCCAGACACCAGCAT +
Preference number: 4 (lower is better)
Translates to: LSRHSVSVVQELGPSLTASSRNP*LPRHQH
Trigger: ATGCTGGTGTCTGGGTAGTCATGGATTTCTGCTGGA...AGCTGTTAGGGACGGGCCCAGCTCCTGCACCACGGACACAGAATGTCTGGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp AGAGATGGACTTGGGCCACATCAGCTTGGTGGCTGGTTGAGGCCACAGGTTCTCAGAGTCTGTGCAGCATaGTGTACACGTCGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: RDGLGPHQLGGWLRPQVLRVCAA*CTRRPP
Trigger: GGGAGGACGACGTGTACAGCATGCTGCACAGACTCT...GAGAACCTGTGGCCTCAACCAGCCACCAAGCTGATGTGGCCCAAGTCCATCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR GCA 90 bp AGAGATGGACTTGGGCCACATCAGCTTGGTGGCTGGTTGAGGCCACAGGTTCTCGCCAGGGCTACCTATTaGAGAGTCTGTGCAGCATGC +
Preference number: 4 (lower is better)
Translates to: RDGLGPHQLGGWLRPQVLARATY*RVCAAC
Trigger: GCATGCTGCACAGACTCTGCAATAGGTAGCCCTGGC...GAGAACCTGTGGCCTCAACCAGCCACCAAGCTGATGTGGCCCAAGTCCATCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp AGAGATGGACTTGGGCCACATCAGCTTGGTGGCTGGTTGAGGCCACAGGTTCTCGAGGGTGTGTCAGTCTaGAGAGAAGCTCCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: RDGLGPHQLGGWLRPQVLEGVSV*REAPGR
Trigger: TCTCCCAGGAGCTTCTCTGCAGACTGACACACCCTC...GAGAACCTGTGGCCTCAACCAGCCACCAAGCTGATGTGGCCCAAGTCCATCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp CCTAAGTGGTGCTGTGGTCCTTTTGCCTTTGTACCCTTCAGTGGCCAATGCCAGACTGGGGCTGCTGGGTaGAGGGGCCTCCACATTGTA +
Preference number: 4 (lower is better)
Translates to: PKWCCGPFAFVPFSGQCQTGAAG*RGLHIV
Trigger: TACAATGTGGAGGCCCCTCCACCCAGCAGCCCCAGT...CTGGCATTGGCCACTGAAGGGTACAAAGGCAAAAGGACCACAGCACCACTTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp ACAGGTTGTCAGAGCAGTCACACCTGTTGGGGGACAGGCTCCTGTGACTCACTCCTGGTCAATTCCATTTaGTGGCAGCGCGGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: TGCQSSHTCWGTGSCDSLLVNSI*WQRGSS
Trigger: GCTGCTACCGCGCTGCCACCAAATGGAATTGACCAG...GAGTGAGTCACAGGAGCCTGTCCCCCAACAGGTGTGACTGCTCTGACAACCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp AAGACCAAGAGATGGACTTGGGCCACATCAGCTTGGTGGCTGGTTGAGGCCACAGCCACATCAGCTTGGTaGCTGGTTGAGGCCACAGGT +
Preference number: 4 (lower is better)
Translates to: KTKRWTWATSAWWLVEATATSAW*LVEATG
Trigger: ACCTGTGGCCTCAACCAGCCACCAAGCTGATGTGGC...TGTGGCCTCAACCAGCCACCAAGCTGATGTGGCCCAAGTCCATCTCTTGGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CCA 90 bp AGACCAAGAGATGGACTTGGGCCACATCAGCTTGGTGGCTGGTTGAGGCCACAGAGCTCTTCCTCTCCCTaGTTTGGGGCAATGAGTCCC +
Preference number: 4 (lower is better)
Translates to: RPRDGLGPHQLGGWLRPQSSSSP*FGAMSP
Trigger: GGGACTCATTGCCCCAAACCAGGGAGAGGAAGAGCT...CTGTGGCCTCAACCAGCCACCAAGCTGATGTGGCCCAAGTCCATCTCTTGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CCA 90 bp AGACAGGCTTCCCCAACCCTTGGCTCAGAAATAGGCTGTGCTTCAAAGGAGAAGCCTGGGCTCTCCCTGTaGGAGCTCTTCCTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: RQASPTLGSEIGCASKEKPGLSL*ELFLSL
Trigger: CAGGGAGAGGAAGAGCTCCCACAGGGAGAGCCCAGG...CTTCTCCTTTGAAGCACAGCCTATTTCTGAGCCAAGGGTTGGGGAAGCCTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CCA 90 bp ATGAGTCCCACATCTAGACAGGCTTCCCCAACCCTTGGCTCAGAAATAGGCTGTCCTGGGCTCTCCCTGTaGGAGCTCTTCCTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: MSPTSRQASPTLGSEIGCPGLSL*ELFLSL
Trigger: CAGGGAGAGGAAGAGCTCCCACAGGGAGAGCCCAGG...ACAGCCTATTTCTGAGCCAAGGGTTGGGGAAGCCTGTCTAGATGTGGGACTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CCA 90 bp GACACCAGCATCTCCACTACCCGGGGTGGGGGAGGGTGTGTCAGTCTGCAGAGAACTGGCTTAGTGCAGTaGTGCTCACAGTTTCAGGAA +
Preference number: 4 (lower is better)
Translates to: DTSISTTRGGGGCVSLQRTGLVQ*CSQFQE
Trigger: TTCCTGAAACTGTGAGCACCACTGCACTAAGCCAGT...TCTCTGCAGACTGACACACCCTCCCCCACCCCGGGTAGTGGAGATGCTGGTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp CTAAGGATGCTGCGGCTCCTCTGCTTCTTTAAGCTGACGTTGCACTGGGAGGCTGTGAACCACCGCGCCTaGCTGTCCTCCTTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: LRMLRLLCFFKLTLHWEAVNHRA*LSSFSL
Trigger: AAGAGAGAAGGAGGACAGCCAGGCGCGGTGGTTCAC...AGCCTCCCAGTGCAACGTCAGCTTAAAGAAGCAGAGGAGCCGCAGCATCCTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435525.1
CDS-3UTR TCA 90 bp GACACCAGCATCTCCACTACCCGGGGTGGGGGAGGGTGTGTCAGTCTGCAGAGATGCAAACCTTTTGATTaGCAATACTCGCCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: DTSISTTRGGGGCVSLQRCKPFD*QYSPLE
Trigger: TTCCAGGGGCGAGTATTGTCAATCAAAAGGTTTGCA...TCTCTGCAGACTGACACACCCTCCCCCACCCCGGGTAGTGGAGATGCTGGTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp TCTCCCTGGTTTGGGGCAATGAGTCCCACATCTAGACAGGCTTCCCCAACCCTTCCCTTCAGTGGCCAATaGCAGGAAGGGGTTACAGGT +
Preference number: 4 (lower is better)
Translates to: SPWFGAMSPTSRQASPTLPFSGQ*QEGVTG
Trigger: ACCTGTAACCCCTTCCTGGCATTGGCCACTGAAGGG...AAGGGTTGGGGAAGCCTGTCTAGATGTGGGACTCATTGCCCCAAACCAGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR GCA 90 bp TCTCCCTGGTTTGGGGCAATGAGTCCCACATCTAGACAGGCTTCCCCAACCCTTGAGGGTGTGTCAGTCTaGAGAGAAGCTCCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: SPWFGAMSPTSRQASPTLEGVSV*REAPGR
Trigger: TCTCCCAGGAGCTTCTCTGCAGACTGACACACCCTC...AAGGGTTGGGGAAGCCTGTCTAGATGTGGGACTCATTGCCCCAAACCAGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp TCTCCCTGGTTTGGGGCAATGAGTCCCACATCTAGACAGGCTTCCCCAACCCTTAGCTGCCCCATCCTCTaGAGGAACTCGTCCACATGT +
Preference number: 4 (lower is better)
Translates to: SPWFGAMSPTSRQASPTLSCPIL*RNSSTC
Trigger: ACATGTGGACGAGTTCCTCCAGAGGATGGGGCAGCT...AAGGGTTGGGGAAGCCTGTCTAGATGTGGGACTCATTGCCCCAAACCAGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp AAGACCAAGAGATGGACTTGGGCCACATCAGCTTGGTGGCTGGTTGAGGCCACAATTCACCCTGTGGCCTaGAGCACGGAGTATCCTCAC +
Preference number: 4 (lower is better)
Translates to: KTKRWTWATSAWWLVEATIHPVA*STEYPH
Trigger: GTGAGGATACTCCGTGCTCCAGGCCACAGGGTGAAT...TGTGGCCTCAACCAGCCACCAAGCTGATGTGGCCCAAGTCCATCTCTTGGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp CCTAAGTGGTGCTGTGGTCCTTTTGCCTTTGTACCCTTCAGTGGCCAATGCCAGGCCACATTCACCCTGTaGCCTGGAGCACGGAGTATC +
Preference number: 4 (lower is better)
Translates to: PKWCCGPFAFVPFSGQCQATFTL*PGARSI
Trigger: GATACTCCGTGCTCCAGGCCACAGGGTGAATGTGGC...CTGGCATTGGCCACTGAAGGGTACAAAGGCAAAAGGACCACAGCACCACTTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp AGAGATGGACTTGGGCCACATCAGCTTGGTGGCTGGTTGAGGCCACAGGTTCTCTGGTGGAGGCTGCAATaGGATGGGACACCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: RDGLGPHQLGGWLRPQVLWWRLQ*DGTPLF
Trigger: AAACAGAGGTGTCCCATCCCATTGCAGCCTCCACCA...GAGAACCTGTGGCCTCAACCAGCCACCAAGCTGATGTGGCCCAAGTCCATCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CCA 90 bp AAGACCAAGAGATGGACTTGGGCCACATCAGCTTGGTGGCTGGTTGAGGCCACAGGAAGGGGTTACAGGTaGTGGAGGCTGCAATGGGAT +
Preference number: 4 (lower is better)
Translates to: KTKRWTWATSAWWLVEATGRGYR*WRLQWD
Trigger: ATCCCATTGCAGCCTCCACCACCTGTAACCCCTTCC...TGTGGCCTCAACCAGCCACCAAGCTGATGTGGCCCAAGTCCATCTCTTGGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CCA 90 bp TCTCCCTGGTTTGGGGCAATGAGTCCCACATCTAGACAGGCTTCCCCAACCCTTGGAAGGGGTTACAGGTaGTGGAGGCTGCAATGGGAT +
Preference number: 4 (lower is better)
Translates to: SPWFGAMSPTSRQASPTLGRGYR*WRLQWD
Trigger: ATCCCATTGCAGCCTCCACCACCTGTAACCCCTTCC...AAGGGTTGGGGAAGCCTGTCTAGATGTGGGACTCATTGCCCCAAACCAGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CCA 90 bp CCTAAGTGGTGCTGTGGTCCTTTTGCCTTTGTACCCTTCAGTGGCCAATGCCAGGCCACATCAGCTTGGTaGCTGGTTGAGGCCACAGGT +
Preference number: 4 (lower is better)
Translates to: PKWCCGPFAFVPFSGQCQATSAW*LVEATG
Trigger: ACCTGTGGCCTCAACCAGCCACCAAGCTGATGTGGC...CTGGCATTGGCCACTGAAGGGTACAAAGGCAAAAGGACCACAGCACCACTTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CCA 90 bp AGAGATGGACTTGGGCCACATCAGCTTGGTGGCTGGTTGAGGCCACAGGTTCTCTTCCTCTCCCTGGTTTaGGGCAATGAGTCCCACATC +
Preference number: 4 (lower is better)
Translates to: RDGLGPHQLGGWLRPQVLFLSLV*GNESHI
Trigger: GATGTGGGACTCATTGCCCCAAACCAGGGAGAGGAA...GAGAACCTGTGGCCTCAACCAGCCACCAAGCTGATGTGGCCCAAGTCCATCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CCA 90 bp CAGCATCTCCACTACCCGGGGTGGGGGAGGGTGTGTCAGTCTGCAGAGAAGCTCCAAACAGCTAATGCATaGAACCACAGACCAACACGT +
Preference number: 4 (lower is better)
Translates to: QHLHYPGWGRVCQSAEKLQTANA*NHRPTR
Trigger: ACGTGTTGGTCTGTGGTTCCATGCATTAGCTGTTTG...GAGCTTCTCTGCAGACTGACACACCCTCCCCCACCCCGGGTAGTGGAGATGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp TGGACTTGGGCCACATCAGCTTGGTGGCTGGTTGAGGCCACAGGTTCTCAAGAGGACAATACTCGCCCCTaGAAACGTGCACATTCCGCA +
Preference number: 4 (lower is better)
Translates to: WTWATSAWWLVEATGSQEDNTRP*KRAHSA
Trigger: TGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTC...CTCTTGAGAACCTGTGGCCTCAACCAGCCACCAAGCTGATGTGGCCCAAGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp AGACCAAGAGATGGACTTGGGCCACATCAGCTTGGTGGCTGGTTGAGGCCACAGGACAATACTCGCCCCTaGAAACGTGCACATTCCGCA +
Preference number: 4 (lower is better)
Translates to: RPRDGLGPHQLGGWLRPQDNTRP*KRAHSA
Trigger: TGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTC...CTGTGGCCTCAACCAGCCACCAAGCTGATGTGGCCCAAGTCCATCTCTTGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp CTAAGGATGCTGCGGCTCCTCTGCTTCTTTAAGCTGACGTTGCACTGGGAGGCTAAGCTGACGTTGCACTaGGAGGCTTGGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: LRMLRLLCFFKLTLHWEAKLTLH*EAWPPK
Trigger: TTTGGGAGGCCAAGCCTCCCAGTGCAACGTCAGCTT...AGCCTCCCAGTGCAACGTCAGCTTAAAGAAGCAGAGGAGCCGCAGCATCCTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435525.1
CDS-3UTR TCA 90 bp GACTGCAGTTTAAAATCCATGCTACACCTAAGTGGTGCTGTGGTCCTTTTGCCTGGGGACAGGCTCCTGTaGCTCACTCCCCTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: DCSLKSMLHLSGAVVLLPGDRLL*LTPLPQ
Trigger: CTGAGGGAGGGGAGTGAGTCACAGGAGCCTGTCCCC...AGGCAAAAGGACCACAGCACCACTTAGGTGTAGCATGGATTTTAAACTGCAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp GCATATTCTGAGCATAGGCACAGTGGCAAAGAACAGTGTAACAGCCGCTGGTCACTCCTATCAGGAGCCTaGCCCTGCAGCATGCCACAG +
Preference number: 4 (lower is better)
Translates to: AYSEHRHSGKEQCNSRWSLLSGA*PCSMPQ
Trigger: CTGTGGCATGCTGCAGGGTCAGGCTCCTGATAGGAG...TGACCAGCGGCTGTTACACTGTTCTTTGCCACTGTGCCTATGCTCAGAATATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp GGATGGGACACCTCTGTTTCTGACCCTGTCCGAGTTTGTAGCTTAGCAGTGAGCAGCTTGGTGGCTGGTTaGGGCCACAGGTTCTCAAGA +
Preference number: 4 (lower is better)
Translates to: GWDTSVSDPVRVCSLAVSSLVAG*GHRFSR
Trigger: TCTTGAGAACCTGTGGCCTCAACCAGCCACCAAGCT...GCTCACTGCTAAGCTACAAACTCGGACAGGGTCAGAAACAGAGGTGTCCCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR TCA 90 bp GTGGTCCTTTTGCCTTTGTACCCTTCAGTGGCCAATGCCAGGAAGGGGTTACAGCCTGGTTTGGGGCAATaGGTCCCACATCTAGACAGG +
Preference number: 4 (lower is better)
Translates to: VVLLPLYPSVANARKGLQPGLGQ*VPHLDR
Trigger: CCTGTCTAGATGTGGGACTCATTGCCCCAAACCAGG...CTGTAACCCCTTCCTGGCATTGGCCACTGAAGGGTACAAAGGCAAAAGGACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR TCA 90 bp AGTGGGCTGCAGTCCACAAACCCAAGGTGTCCTGTCCCAGAGCTCAATGTCAAACACCAGAATGCTGGCTaGAGACCAACCCACAGAGGA +
Preference number: 4 (lower is better)
Translates to: SGLQSTNPRCPVPELNVKHQNAG*RPTHRG
Trigger: TCCTCTGTGGGTTGGTCTTCAGCCAGCATTCTGGTG...TTTGACATTGAGCTCTGGGACAGGACACCTTGGGTTTGTGGACTGCAGCCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp TGGACTTGGGCCACATCAGCTTGGTGGCTGGTTGAGGCCACAGGTTCTCAAGAGCTATTGCAGAGTCTGTaGAGCATGCTGTACACGTCG +
Preference number: 4 (lower is better)
Translates to: WTWATSAWWLVEATGSQELLQSL*SMLYTS
Trigger: CGACGTGTACAGCATGCTGCACAGACTCTGCAATAG...CTCTTGAGAACCTGTGGCCTCAACCAGCCACCAAGCTGATGTGGCCCAAGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR GCA 90 bp GACACCTCTGTTTCTGACCCTGTCCGAGTTTGTAGCTTAGCAGTGAGCATATTCCCAGAGGTTCCAGAGTaGACAGGCGGGAGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: DTSVSDPVRVCSLAVSIFPEVPE*TGGRQA
Trigger: TGCCTGCCTCCCGCCTGTGCACTCTGGAACCTCTGG...GAATATGCTCACTGCTAAGCTACAAACTCGGACAGGGTCAGAAACAGAGGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp AAGGAGCTTCCTCACCATCAACTGTGGCAGGTGGCATTCCTTTTTCAGTATGCACCAGAGGTTCCAGAGTaGACAGGCGGGAGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: KELPHHQLWQVAFLFQYAPEVPE*TGGRQA
Trigger: TGCCTGCCTCCCGCCTGTGCACTCTGGAACCTCTGG...TGCATACTGAAAAAGGAATGCCACCTGCCACAGTTGATGGTGAGGAAGCTCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp AGACAGGCTTCCCCAACCCTTGGCTCAGAAATAGGCTGTGCTTCAAAGGAGAAGCCTGACCCTGCAGCATaGCACAGGTTGTCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: RQASPTLGSEIGCASKEKPDPAA*HRLSEQ
Trigger: CTGCTCTGACAACCTGTGGCATGCTGCAGGGTCAGG...CTTCTCCTTTGAAGCACAGCCTATTTCTGAGCCAAGGGTTGGGGAAGCCTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp CCTAAGTGGTGCTGTGGTCCTTTTGCCTTTGTACCCTTCAGTGGCCAATGCCAGCCCTTCAGTGGCCAATaGCAGGAAGGGGTTACAGGT +
Preference number: 4 (lower is better)
Translates to: PKWCCGPFAFVPFSGQCQPFSGQ*QEGVTG
Trigger: ACCTGTAACCCCTTCCTGGCATTGGCCACTGAAGGG...CTGGCATTGGCCACTGAAGGGTACAAAGGCAAAAGGACCACAGCACCACTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR GCA 90 bp GCAAACCTTTTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTATTCTGTGTCCGTGGTaGAGGAGCTGGGCCCGTCCC +
Preference number: 4 (lower is better)
Translates to: ANLLIDNTRPWKRAHSACILCPW*RSWARP
Trigger: GGGACGGGCCCAGCTCCTGCACCACGGACACAGAAT...ACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp CTCAAGTCTGCCAAGTGTCTTCACTCCATCGTCAGAAGTGGAGCACTATCCCTAAAGCTGACGTTGCACTaGGAGGCTTTCTCGCCCGCG +
Preference number: 4 (lower is better)
Translates to: LKSAKCLHSIVRSGALSLKLTLH*EAFSPA
Trigger: CGCGGGCGAGAAAGCCTCCCAGTGCAACGTCAGCTT...TAGGGATAGTGCTCCACTTCTGACGATGGAGTGAAGACACTTGGCAGACTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp GGATGGGACACCTCTGTTTCTGACCCTGTCCGAGTTTGTAGCTTAGCAGTGAGCAGCTGCCCCATCCTCTaGAGGAACTCGTCCACATGT +
Preference number: 4 (lower is better)
Translates to: GWDTSVSDPVRVCSLAVSSCPIL*RNSSTC
Trigger: ACATGTGGACGAGTTCCTCCAGAGGATGGGGCAGCT...GCTCACTGCTAAGCTACAAACTCGGACAGGGTCAGAAACAGAGGTGTCCCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp GTGGTCCTTTTGCCTTTGTACCCTTCAGTGGCCAATGCCAGGAAGGGGTTACAGCTGGTCAATTCCATTTaGTGGCAGCGCGGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: VVLLPLYPSVANARKGLQLVNSI*WQRGSS
Trigger: GCTGCTACCGCGCTGCCACCAAATGGAATTGACCAG...CTGTAACCCCTTCCTGGCATTGGCCACTGAAGGGTACAAAGGCAAAAGGACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CCA 90 bp TGTGGGAGCTCTTCCTCTCCCTGGTTTGGGGCAATGAGTCCCACATCTAGACAGCTTTGTACCCTTCAGTaGCCAATGCCAGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: CGSSSSPWFGAMSPTSRQLCTLQ*PMPGRG
Trigger: ACCCCTTCCTGGCATTGGCCACTGAAGGGTACAAAG...CTGTCTAGATGTGGGACTCATTGCCCCAAACCAGGGAGAGGAAGAGCTCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CCA 90 bp ATGGGATGGGACACCTCTGTTTCTGACCCTGTCCGAGTTTGTAGCTTAGCAGTGCCTGTGCACTTCCACTaGAGGCCTGGCCAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: MGWDTSVSDPVRVCSLAVPVHFH*RPGQRS
Trigger: ACTTCTCTGGCCAGGCCTCCAGTGGAAGTGCACAGG...CACTGCTAAGCTACAAACTCGGACAGGGTCAGAAACAGAGGTGTCCCATCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp ATGCCAACTGTCCAGCACAGCACCTTTAAAAGCAGAGGCACAAACGTAGGATTGCTCCACTACCCGGGGTaGGGGAGGGTGTGTCAGTCT +
Preference number: 4 (lower is better)
Translates to: MPTVQHSTFKSRGTNVGLLHYPG*GRVCQS
Trigger: AGACTGACACACCCTCCCCCACCCCGGGTAGTGGAG...CAATCCTACGTTTGTGCCTCTGCTTTTAAAGGTGCTGTGCTGGACAGTTGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp CTAAGGATGCTGCGGCTCCTCTGCTTCTTTAAGCTGACGTTGCACTGGGAGGCTTCTGCTTCTTTAAGCTaGCGTTGCACTGGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: LRMLRLLCFFKLTLHWEASASLS*RCTGRL
Trigger: AAGCCTCCCAGTGCAACGTCAGCTTAAAGAAGCAGA...AGCCTCCCAGTGCAACGTCAGCTTAAAGAAGCAGAGGAGCCGCAGCATCCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435525.1
CDS-3UTR TCA 90 bp GTGGTCCTTTTGCCTTTGTACCCTTCAGTGGCCAATGCCAGGAAGGGGTTACAGAAACACATGATTCTCTaGAGAGCCGGGCCCGGAACA +
Preference number: 4 (lower is better)
Translates to: VVLLPLYPSVANARKGLQKHMIL*RAGPGT
Trigger: TGTTCCGGGCCCGGCTCTTCAGAGAATCATGTGTTT...CTGTAACCCCTTCCTGGCATTGGCCACTGAAGGGTACAAAGGCAAAAGGACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp TGGACTTGGGCCACATCAGCTTGGTGGCTGGTTGAGGCCACAGGTTCTCAAGAGGGGAATTGTCAACAATaGTCACTTTGCTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: WTWATSAWWLVEATGSQEGNCQQ*SLCSAP
Trigger: GGGAGCTGAGCAAAGTGATCATTGTTGACAATTCCC...CTCTTGAGAACCTGTGGCCTCAACCAGCCACCAAGCTGATGTGGCCCAAGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR TCA 90 bp GCTTCCCCAACCCTTGGCTCAGAAATAGGCTGTGCTTCAAAGGAGAAGACCAAGCCTGGTTTGGGGCAATaGGTCCCACATCTAGACAGG +
Preference number: 4 (lower is better)
Translates to: ASPTLGSEIGCASKEKTKPGLGQ*VPHLDR
Trigger: CCTGTCTAGATGTGGGACTCATTGCCCCAAACCAGG...CTTGGTCTTCTCCTTTGAAGCACAGCCTATTTCTGAGCCAAGGGTTGGGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR TCA 90 bp ATGGGATGGGACACCTCTGTTTCTGACCCTGTCCGAGTTTGTAGCTTAGCAGTGCGAAGGGGGCATGGTTaGGGGTCTAAGGCTCTCATT +
Preference number: 4 (lower is better)
Translates to: MGWDTSVSDPVRVCSLAVRRGHG*GSKALI
Trigger: AATGAGAGCCTTAGACCCTCAACCATGCCCCCTTCG...CACTGCTAAGCTACAAACTCGGACAGGGTCAGAAACAGAGGTGTCCCATCCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp CTCTCCAGACATTCTGTGTCCGTGGTGCAGGAGCTGGGCCCGTCCCTAACAGCTTCATTGCAAACCTTTTaGTTGACAATACTCGCCCCT +
Preference number: 4 (lower is better)
Translates to: LSRHSVSVVQELGPSLTASLQTF*LTILAP
Trigger: AGGGGCGAGTATTGTCAATCAAAAGGTTTGCAATGA...AGCTGTTAGGGACGGGCCCAGCTCCTGCACCACGGACACAGAATGTCTGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp CTAAGGATGCTGCGGCTCCTCTGCTTCTTTAAGCTGACGTTGCACTGGGAGGCTATGCTGCGGCTCCTCTaGTTCTTTAAGCTGACGTTG +
Preference number: 4 (lower is better)
Translates to: LRMLRLLCFFKLTLHWEAMLRLL*FFKLTL
Trigger: CAACGTCAGCTTAAAGAAGCAGAGGAGCCGCAGCAT...AGCCTCCCAGTGCAACGTCAGCTTAAAGAAGCAGAGGAGCCGCAGCATCCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435525.1
CDS-3UTR GCA 90 bp TCCCCAACCCTTGGCTCAGAAATAGGCTGTGCTTCAAAGGAGAAGACCAAGAGAAGGGGACAGGTGGTCTaGTTGGAGGGGAGGACAGTT +
Preference number: 4 (lower is better)
Translates to: SPTLGSEIGCASKEKTKRRGQVV*LEGRTV
Trigger: AACTGTCCTCCCCTCCAAGCAGACCACCTGTCCCCT...TCTCTTGGTCTTCTCCTTTGAAGCACAGCCTATTTCTGAGCCAAGGGTTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp ATGGGATGGGACACCTCTGTTTCTGACCCTGTCCGAGTTTGTAGCTTAGCAGTGCCCTTCAGTGGCCAATaGCAGGAAGGGGTTACAGGT +
Preference number: 4 (lower is better)
Translates to: MGWDTSVSDPVRVCSLAVPFSGQ*QEGVTG
Trigger: ACCTGTAACCCCTTCCTGGCATTGGCCACTGAAGGG...CACTGCTAAGCTACAAACTCGGACAGGGTCAGAAACAGAGGTGTCCCATCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR GCA 90 bp AGACAGGCTTCCCCAACCCTTGGCTCAGAAATAGGCTGTGCTTCAAAGGAGAAGTCTCGAACCCTGGCATaGCAACTGTCCAGCACAGCA +
Preference number: 4 (lower is better)
Translates to: RQASPTLGSEIGCASKEKSRTLA*QLSSTA
Trigger: TGCTGTGCTGGACAGTTGGCATGCCAGGGTTCGAGA...CTTCTCCTTTGAAGCACAGCCTATTTCTGAGCCAAGGGTTGGGGAAGCCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp CTCAAGTCTGCCAAGTGTCTTCACTCCATCGTCAGAAGTGGAGCACTATCCCTAGCCACATTCACCCTGTaGCCTGGAGCACGGAGTATC +
Preference number: 4 (lower is better)
Translates to: LKSAKCLHSIVRSGALSLATFTL*PGARSI
Trigger: GATACTCCGTGCTCCAGGCCACAGGGTGAATGTGGC...TAGGGATAGTGCTCCACTTCTGACGATGGAGTGAAGACACTTGGCAGACTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp AGTGGTGCTGTGGTCCTTTTGCCTTTGTACCCTTCAGTGGCCAATGCCAGGAAGTGGTGGAGGCTGCAATaGGATGGGACACCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: SGAVVLLPLYPSVANARKWWRLQ*DGTPLF
Trigger: AAACAGAGGTGTCCCATCCCATTGCAGCCTCCACCA...CTTCCTGGCATTGGCCACTGAAGGGTACAAAGGCAAAAGGACCACAGCACCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CCA 90 bp TTTGGGGCAATGAGTCCCACATCTAGACAGGCTTCCCCAACCCTTGGCTCAGAAACCAAGAGATGGACTTaGGCCACATCAGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: FGAMSPTSRQASPTLGSETKRWT*ATSAWW
Trigger: CCACCAAGCTGATGTGGCCCAAGTCCATCTCTTGGT...TTCTGAGCCAAGGGTTGGGGAAGCCTGTCTAGATGTGGGACTCATTGCCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CCA 90 bp ATGGGATGGGACACCTCTGTTTCTGACCCTGTCCGAGTTTGTAGCTTAGCAGTGCTCCCACCAGAATGCTaGCTGAAGACCAACCCACAG +
Preference number: 4 (lower is better)
Translates to: MGWDTSVSDPVRVCSLAVLPPEC*LKTNPQ
Trigger: CTGTGGGTTGGTCTTCAGCCAGCATTCTGGTGGGAG...CACTGCTAAGCTACAAACTCGGACAGGGTCAGAAACAGAGGTGTCCCATCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp GACACCTCTGTTTCTGACCCTGTCCGAGTTTGTAGCTTAGCAGTGAGCATATTCGACATTCTGTGTCCGTaGTGCAGGAGCTGGGCCCGT +
Preference number: 4 (lower is better)
Translates to: DTSVSDPVRVCSLAVSIFDILCP*CRSWAR
Trigger: ACGGGCCCAGCTCCTGCACCACGGACACAGAATGTC...GAATATGCTCACTGCTAAGCTACAAACTCGGACAGGGTCAGAAACAGAGGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp CAGCATCTCCACTACCCGGGGTGGGGGAGGGTGTGTCAGTCTGCAGAGAAGCTCGGTATTTTGGTAACATaGGAAGTATATGGCACAGAG +
Preference number: 4 (lower is better)
Translates to: QHLHYPGWGRVCQSAEKLGILVT*EVYGTE
Trigger: CTCTGTGCCATATACTTCCCATGTTACCAAAATACC...GAGCTTCTCTGCAGACTGACACACCCTCCCCCACCCCGGGTAGTGGAGATGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp AGAATTTTGGAGTGTGGTCAAATAAGGTGCACAGATTCCAGAACCCTCAGAGGGCTCCACTACCCGGGGTaGGGGAGGGTGTGTCAGTCT +
Preference number: 4 (lower is better)
Translates to: RILECGQIRCTDSRTLRGLHYPG*GRVCQS
Trigger: AGACTGACACACCCTCCCCCACCCCGGGTAGTGGAG...CCCTCTGAGGGTTCTGGAATCTGTGCACCTTATTTGACCACACTCCAAAATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp CTTTTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTAGCATTCTCCACTACCCGGGGTaGGGGAGGGTGTGTCAGTCT +
Preference number: 4 (lower is better)
Translates to: LLIDNTRPWKRAHSACSILHYPG*GRVCQS
Trigger: AGACTGACACACCCTCCCCCACCCCGGGTAGTGGAG...AATGCTACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000443503.6
ENST00000447745.5
CDS-3UTR TCA 90 bp TGTGGGAGCTCTTCCTCTCCCTGGTTTGGGGCAATGAGTCCCACATCTAGACAGAGGATGGAAGATGTATaGGGCAGGGGAATTGTCAAC +
Preference number: 4 (lower is better)
Translates to: CGSSSSPWFGAMSPTSRQRMEDV*GRGIVN
Trigger: GTTGACAATTCCCCTGCCTCATACATCTTCCATCCT...CTGTCTAGATGTGGGACTCATTGCCCCAAACCAGGGAGAGGAAGAGCTCCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR TCA 90 bp AACCTTTTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTAGCCCTCAAAGAAGGGGATaGGGTCCAGCAGCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: NLLIDNTRPWKRAHSACSPQRRG*GPAAPC
Trigger: ACACGGAGCTGCTGGACCTCATCCCCTTCTTTGAGG...GCTACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000443503.6
ENST00000447745.5
CDS-3UTR TCA 90 bp AGTGGGCTGCAGTCCACAAACCCAAGGTGTCCTGTCCCAGAGCTCAATGTCAAAGTAGGAAAGAGATTCTaGGTTGGGTCAGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: SGLQSTNPRCPVPELNVKVGKRF*VGSAAL
Trigger: CAGAGCAGCTGACCCAACTCAGAATCTCTTTCCTAC...TTTGACATTGAGCTCTGGGACAGGACACCTTGGGTTTGTGGACTGCAGCCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp AGGAAGGAAATCATTGCAAACCTTTTGATTGACAATACTCGCCCCTGGAAACGTGGGGACAGGCTCCTGTaGCTCACTCCCCTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: RKEIIANLLIDNTRPWKRGDRLL*LTPLPQ
Trigger: CTGAGGGAGGGGAGTGAGTCACAGGAGCCTGTCCCC...ACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTTTGCAATGATTTCCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp CTCAAGTCTGCCAAGTGTCTTCACTCCATCGTCAGAAGTGGAGCACTATCCCTACGAAGGGGGCATGGTTaGGGGTCTAAGGCTCTCATT +
Preference number: 4 (lower is better)
Translates to: LKSAKCLHSIVRSGALSLRRGHG*GSKALI
Trigger: AATGAGAGCCTTAGACCCTCAACCATGCCCCCTTCG...TAGGGATAGTGCTCCACTTCTGACGATGGAGTGAAGACACTTGGCAGACTTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp AGTGGGCTGCAGTCCACAAACCCAAGGTGTCCTGTCCCAGAGCTCAATGTCAAATCCAGCAGAAATCCATaGCTACCCAGACACCAGCAT +
Preference number: 4 (lower is better)
Translates to: SGLQSTNPRCPVPELNVKSSRNP*LPRHQH
Trigger: ATGCTGGTGTCTGGGTAGTCATGGATTTCTGCTGGA...TTTGACATTGAGCTCTGGGACAGGACACCTTGGGTTTGTGGACTGCAGCCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp AGGAAGGAAATCATTGCAAACCTTTTGATTGACAATACTCGCCCCTGGAAACGTGAAGCACACTGGGGCTaGTGGGTGGAGGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RKEIIANLLIDNTRPWKREAHWG*WVEGPP
Trigger: TGGAGGCCCCTCCACCCAGCAGCCCCAGTGTGCTTC...ACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTTTGCAATGATTTCCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp GGATGGGACACCTCTGTTTCTGACCCTGTCCGAGTTTGTAGCTTAGCAGTGAGCCTATTGCAGAGTCTGTaGAGCATGCTGTACACGTCG +
Preference number: 4 (lower is better)
Translates to: GWDTSVSDPVRVCSLAVSLLQSL*SMLYTS
Trigger: CGACGTGTACAGCATGCTGCACAGACTCTGCAATAG...GCTCACTGCTAAGCTACAAACTCGGACAGGGTCAGAAACAGAGGTGTCCCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR GCA 90 bp GACACCTCTGTTTCTGACCCTGTCCGAGTTTGTAGCTTAGCAGTGAGCATATTCCCTGACCCTGCAGCATaGCACAGGTTGTCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: DTSVSDPVRVCSLAVSIFPDPAA*HRLSEQ
Trigger: CTGCTCTGACAACCTGTGGCATGCTGCAGGGTCAGG...GAATATGCTCACTGCTAAGCTACAAACTCGGACAGGGTCAGAAACAGAGGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp ATGGGATGGGACACCTCTGTTTCTGACCCTGTCCGAGTTTGTAGCTTAGCAGTGTCACTCCCACCAGAATaGTGGCTGAAGACCAACCCA +
Preference number: 4 (lower is better)
Translates to: MGWDTSVSDPVRVCSLAVSLPPE*WLKTNP
Trigger: TGGGTTGGTCTTCAGCCAGCATTCTGGTGGGAGTGA...CACTGCTAAGCTACAAACTCGGACAGGGTCAGAAACAGAGGTGTCCCATCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp TCCCCAACCCTTGGCTCAGAAATAGGCTGTGCTTCAAAGGAGAAGACCAAGAGACTGGTCAATTCCATTTaGTGGCAGCGCGGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: SPTLGSEIGCASKEKTKRLVNSI*WQRGSS
Trigger: GCTGCTACCGCGCTGCCACCAAATGGAATTGACCAG...TCTCTTGGTCTTCTCCTTTGAAGCACAGCCTATTTCTGAGCCAAGGGTTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CCA 90 bp GGATGGGACACCTCTGTTTCTGACCCTGTCCGAGTTTGTAGCTTAGCAGTGAGCCAGTGTAACAGCCGCTaGTCAATTCCATTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: GWDTSVSDPVRVCSLAVSQCNSR*SIPFGG
Trigger: GCCACCAAATGGAATTGACCAGCGGCTGTTACACTG...GCTCACTGCTAAGCTACAAACTCGGACAGGGTCAGAAACAGAGGTGTCCCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CCA 90 bp ACAGGCTTCCCCAACCCTTGGCTCAGAAATAGGCTGTGCTTCAAAGGAGAAGACCTTTGTACCCTTCAGTaGCCAATGCCAGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: TGFPNPWLRNRLCFKGEDLCTLQ*PMPGRG
Trigger: ACCCCTTCCTGGCATTGGCCACTGAAGGGTACAAAG...GTCTTCTCCTTTGAAGCACAGCCTATTTCTGAGCCAAGGGTTGGGGAAGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CCA 90 bp GTGGTCCTTTTGCCTTTGTACCCTTCAGTGGCCAATGCCAGGAAGGGGTTACAGCATGCTACACCTAAGTaGTGCTGTGGTCCTTTTGCC +
Preference number: 4 (lower is better)
Translates to: VVLLPLYPSVANARKGLQHATPK*CCGPFA
Trigger: GGCAAAAGGACCACAGCACCACTTAGGTGTAGCATG...CTGTAACCCCTTCCTGGCATTGGCCACTGAAGGGTACAAAGGCAAAAGGACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CCA 90 bp GACACCTCTGTTTCTGACCCTGTCCGAGTTTGTAGCTTAGCAGTGAGCATATTCTGGGCCACATCAGCTTaGTGGCTGGTTGAGGCCACA +
Preference number: 4 (lower is better)
Translates to: DTSVSDPVRVCSLAVSIFWATSA*WLVEAT
Trigger: TGTGGCCTCAACCAGCCACCAAGCTGATGTGGCCCA...GAATATGCTCACTGCTAAGCTACAAACTCGGACAGGGTCAGAAACAGAGGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CCA 90 bp AGACAGGCTTCCCCAACCCTTGGCTCAGAAATAGGCTGTGCTTCAAAGGAGAAGACCAAGAGATGGACTTaGGCCACATCAGCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: RQASPTLGSEIGCASKEKTKRWT*ATSAWW
Trigger: CCACCAAGCTGATGTGGCCCAAGTCCATCTCTTGGT...CTTCTCCTTTGAAGCACAGCCTATTTCTGAGCCAAGGGTTGGGGAAGCCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CCA 90 bp CCCTGGTTTGGGGCAATGAGTCCCACATCTAGACAGGCTTCCCCAACCCTTGGCTGGCATGTGGATTACTaGTTTGGAACACTCAGAATG +
Preference number: 4 (lower is better)
Translates to: PWFGAMSPTSRQASPTLGWHVDY*FGTLRM
Trigger: CATTCTGAGTGTTCCAAACCAGTAATCCACATGCCA...GCCAAGGGTTGGGGAAGCCTGTCTAGATGTGGGACTCATTGCCCCAAACCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp GTGGTCCTTTTGCCTTTGTACCCTTCAGTGGCCAATGCCAGGAAGGGGTTACAGCTCCATCGTCAGAAGTaGAGCACTATCCCTAGGTTC +
Preference number: 4 (lower is better)
Translates to: VVLLPLYPSVANARKGLQLHRQK*STIPRF
Trigger: GAACCTAGGGATAGTGCTCCACTTCTGACGATGGAG...CTGTAACCCCTTCCTGGCATTGGCCACTGAAGGGTACAAAGGCAAAAGGACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp GTGGTCCTTTTGCCTTTGTACCCTTCAGTGGCCAATGCCAGGAAGGGGTTACAGACGATGAAAAACACATaGTTCTCTGAAGAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: VVLLPLYPSVANARKGLQTMKNT*FSEEPG
Trigger: GCCCGGCTCTTCAGAGAATCATGTGTTTTTCATCGT...CTGTAACCCCTTCCTGGCATTGGCCACTGAAGGGTACAAAGGCAAAAGGACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp TTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTAGCATTTCCAGCTTGGTGGCTGGTTaGGGCCACAGGTTCTCAAGA +
Preference number: 4 (lower is better)
Translates to: LIDNTRPWKRAHSACSISSLVAG*GHRFSR
Trigger: TCTTGAGAACCTGTGGCCTCAACCAGCCACCAAGCT...GGAAATGCTACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp AAGGAGCTTCCTCACCATCAACTGTGGCAGGTGGCATTCCTTTTTCAGTATGCACACCAGAATGCTGGCTaGAGACCAACCCACAGAGGA +
Preference number: 4 (lower is better)
Translates to: KELPHHQLWQVAFLFQYAHQNAG*RPTHRG
Trigger: TCCTCTGTGGGTTGGTCTTCAGCCAGCATTCTGGTG...TGCATACTGAAAAAGGAATGCCACCTGCCACAGTTGATGGTGAGGAAGCTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp TTTGGGGCAATGAGTCCCACATCTAGACAGGCTTCCCCAACCCTTGGCTCAGAAGACCTGTTTACCCCCTaGATACTTACTTCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: FGAMSPTSRQASPTLGSEDLFTP*ILTSLL
Trigger: CAGAAGGGAAGTAAGTATTCAGGGGGTAAACAGGTC...TTCTGAGCCAAGGGTTGGGGAAGCCTGTCTAGATGTGGGACTCATTGCCCCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp ACAGGTTGTCAGAGCAGTCACACCTGTTGGGGGACAGGCTCCTGTGACTCACTCCACATGACAGACACTTaGCTGCAACATTCAAGACAT +
Preference number: 4 (lower is better)
Translates to: TGCQSSHTCWGTGSCDSLHMTDT*LQHSRH
Trigger: ATGTCTTGAATGTTGCAGTCAAGTGTCTGTCATGTG...GAGTGAGTCACAGGAGCCTGTCCCCCAACAGGTGTGACTGCTCTGACAACCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp AACCTTTTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTAGCCCAAATAAGGCCCTGTaGTGCCAACGAAGGGGGCAT +
Preference number: 4 (lower is better)
Translates to: NLLIDNTRPWKRAHSACSPNKAL*CQRRGH
Trigger: ATGCCCCCTTCGTTGGCATCACAGGGCCTTATTTGG...GCTACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp AGTGGTGCTGTGGTCCTTTTGCCTTTGTACCCTTCAGTGGCCAATGCCAGGAAGTCAGGAACTACTAGGTaGAGTGTCTGGCTCAAGTCT +
Preference number: 4 (lower is better)
Translates to: SGAVVLLPLYPSVANARKSGTTR*SVWLKS
Trigger: AGACTTGAGCCAGACACTTCACCTAGTAGTTCCTGA...CTTCCTGGCATTGGCCACTGAAGGGTACAAAGGCAAAAGGACCACAGCACCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp ACGGCATCTTTATTCATAGCAGCCTGCGGATCCGAAAACTCACACCCTTCCCCCTCCACCATAAGTGGGTaGCTTGTGGCATTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: TASLFIAACGSENSHPSPSTISG*LVAFSC
Trigger: ACAGGAAAATGCCACAAGTCACCCACTTATGGTGGA...GGGGGAAGGGTGTGAGTTTTCGGATCCGCAGGCTGCTATGAATAAAGATGCCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000416688.5
CDS-3UTR GCA 90 bp AGACAGGCTTCCCCAACCCTTGGCTCAGAAATAGGCTGTGCTTCAAAGGAGAAGCTATTGCAGAGTCTGTaGAGCATGCTGTACACGTCG +
Preference number: 4 (lower is better)
Translates to: RQASPTLGSEIGCASKEKLLQSL*SMLYTS
Trigger: CGACGTGTACAGCATGCTGCACAGACTCTGCAATAG...CTTCTCCTTTGAAGCACAGCCTATTTCTGAGCCAAGGGTTGGGGAAGCCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR GCA 90 bp AAGGAGCTTCCTCACCATCAACTGTGGCAGGTGGCATTCCTTTTTCAGTATGCAGCCAGGGCTACCTATTaGAGAGTCTGTGCAGCATGC +
Preference number: 4 (lower is better)
Translates to: KELPHHQLWQVAFLFQYAARATY*RVCAAC
Trigger: GCATGCTGCACAGACTCTGCAATAGGTAGCCCTGGC...TGCATACTGAAAAAGGAATGCCACCTGCCACAGTTGATGGTGAGGAAGCTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp AGAGATGGACTTGGGCCACATCAGCTTGGTGGCTGGTTGAGGCCACAGGTTCTCGGACTAAGGCAATGGTaGCAATATGAAAGGGTTCTT +
Preference number: 4 (lower is better)
Translates to: RDGLGPHQLGGWLRPQVLGLRQW*QYERVL
Trigger: AAGAACCCTTTCATATTGGCACCATTGCCTTAGTCC...GAGAACCTGTGGCCTCAACCAGCCACCAAGCTGATGTGGCCCAAGTCCATCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp TGTGGGAGCTCTTCCTCTCCCTGGTTTGGGGCAATGAGTCCCACATCTAGACAGGATTTCCATCCTCTTTaGCCGCTCTTCCAAATAAGG +
Preference number: 4 (lower is better)
Translates to: CGSSSSPWFGAMSPTSRQDFHPL*PLFQIR
Trigger: CCTTATTTGGAAGAGCGGGCAAAGAGGATGGAAATC...CTGTCTAGATGTGGGACTCATTGCCCCAAACCAGGGAGAGGAAGAGCTCCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp AGTGGTGCTGTGGTCCTTTTGCCTTTGTACCCTTCAGTGGCCAATGCCAGGAAGTGTCTGGCTCAAGTCTaGCAAGTGTCTTCACTCCAT +
Preference number: 4 (lower is better)
Translates to: SGAVVLLPLYPSVANARKCLAQV*QVSSLH
Trigger: ATGGAGTGAAGACACTTGGCAGACTTGAGCCAGACA...CTTCCTGGCATTGGCCACTGAAGGGTACAAAGGCAAAAGGACCACAGCACCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp CCTAAGTGGTGCTGTGGTCCTTTTGCCTTTGTACCCTTCAGTGGCCAATGCCAGGGCTTAGTGCAGTGGTaGTCACAGTTTCAGGAACTA +
Preference number: 4 (lower is better)
Translates to: PKWCCGPFAFVPFSGQCQGLVQW*SQFQEL
Trigger: TAGTTCCTGAAACTGTGAGCACCACTGCACTAAGCC...CTGGCATTGGCCACTGAAGGGTACAAAGGCAAAAGGACCACAGCACCACTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp AGTGGTGCTGTGGTCCTTTTGCCTTTGTACCCTTCAGTGGCCAATGCCAGGAAGAACATCATAGTGGGCTaGAGTCCACAAACCCAAGGT +
Preference number: 4 (lower is better)
Translates to: SGAVVLLPLYPSVANARKNIIVG*SPQTQG
Trigger: ACCTTGGGTTTGTGGACTGCAGCCCACTATGATGTT...CTTCCTGGCATTGGCCACTGAAGGGTACAAAGGCAAAAGGACCACAGCACCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp AAGACCAAGAGATGGACTTGGGCCACATCAGCTTGGTGGCTGGTTGAGGCCACAGCAGCCAGCCAATTTTaGACAGTTAACTGCAAGTAC +
Preference number: 4 (lower is better)
Translates to: KTKRWTWATSAWWLVEATAASQF*TVNCKY
Trigger: GTACTTGCAGTTAACTGTGCAAAATTGGCTGGCTGC...TGTGGCCTCAACCAGCCACCAAGCTGATGTGGCCCAAGTCCATCTCTTGGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp CTAAGGATGCTGCGGCTCCTCTGCTTCTTTAAGCTGACGTTGCACTGGGAGGCTTGCCACTCGTCTTCTTaGCCTTCTCAGAAAGAGAAT +
Preference number: 4 (lower is better)
Translates to: LRMLRLLCFFKLTLHWEACHSSS*PSQKEN
Trigger: ATTCTCTTTCTGAGAAGGGCAAGAAGACGAGTGGCA...AGCCTCCCAGTGCAACGTCAGCTTAAAGAAGCAGAGGAGCCGCAGCATCCTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435525.1
CDS-3UTR CCA 90 bp TGTCAAACAAGGAACATGGCACTGCTTAAACACCAAACTGGGAAAGGCTGCAAAAAGCTGACGTTGCACTaGGAGGCTTTCTCGCCCGCG +
Preference number: 4 (lower is better)
Translates to: CQTRNMALLKHQTGKGCKKLTLH*EAFSPA
Trigger: CGCGGGCGAGAAAGCCTCCCAGTGCAACGTCAGCTT...TTTGCAGCCTTTCCCAGTTTGGTGTTTAAGCAGTGCCATGTTCCTTGTTTGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp TTTGGCAGGAAGGAAATCATTGCAAACCTTTTGATTGACAATACTCGCCCCTGGACTGGGGCTGCTGGGTaGAGGGGCCTCCACATTGTA +
Preference number: 4 (lower is better)
Translates to: FGRKEIIANLLIDNTRPWTGAAG*RGLHIV
Trigger: TACAATGTGGAGGCCCCTCCACCCAGCAGCCCCAGT...CCAGGGGCGAGTATTGTCAATCAAAAGGTTTGCAATGATTTCCTTCCTGCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp AGACAGGCTTCCCCAACCCTTGGCTCAGAAATAGGCTGTGCTTCAAAGGAGAAGAAGCACCGTCACCTCTaGAAGAAGGTACTTAGCTGG +
Preference number: 4 (lower is better)
Translates to: RQASPTLGSEIGCASKEKKHRHL*KKVLSW
Trigger: CCAGCTAAGTACCTTCTTCCAGAGGTGACGGTGCTT...CTTCTCCTTTGAAGCACAGCCTATTTCTGAGCCAAGGGTTGGGGAAGCCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp TTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTAGCATTTCCAGCTGCCCCATCCTCTaGAGGAACTCGTCCACATGT +
Preference number: 4 (lower is better)
Translates to: LIDNTRPWKRAHSACSISSCPIL*RNSSTC
Trigger: ACATGTGGACGAGTTCCTCCAGAGGATGGGGCAGCT...GGAAATGCTACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000443503.6
ENST00000447745.5
CDS-3UTR CCA 90 bp GCAAACCTTTTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTATTCACCCTGTGGCCTaGAGCACGGAGTATCCTCAC +
Preference number: 4 (lower is better)
Translates to: ANLLIDNTRPWKRAHSACIHPVA*STEYPH
Trigger: GTGAGGATACTCCGTGCTCCAGGCCACAGGGTGAAT...ACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp GCAAACCTTTTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTTCAGCTGCTCTGAGCTaGGATAGAAGGGGACAGGTG +
Preference number: 4 (lower is better)
Translates to: ANLLIDNTRPWKRAHSACSAALS*DRRGQV
Trigger: CACCTGTCCCCTTCTATCCCAGCTCAGAGCAGCTGA...ACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp AGGAAGGAAATCATTGCAAACCTTTTGATTGACAATACTCGCCCCTGGAAACGTCCTGGGCTCTCCCTGTaGGAGCTCTTCCTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: RKEIIANLLIDNTRPWKRPGLSL*ELFLSL
Trigger: CAGGGAGAGGAAGAGCTCCCACAGGGAGAGCCCAGG...ACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTTTGCAATGATTTCCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp ACAGGTTGTCAGAGCAGTCACACCTGTTGGGGGACAGGCTCCTGTGACTCACTCAGAGGACTAAGGCAATaGTGCCAATATGAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: TGCQSSHTCWGTGSCDSLRGLRQ*CQYERV
Trigger: AACCCTTTCATATTGGCACCATTGCCTTAGTCCTCT...GAGTGAGTCACAGGAGCCTGTCCCCCAACAGGTGTGACTGCTCTGACAACCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp CAGCATCTCCACTACCCGGGGTGGGGGAGGGTGTGTCAGTCTGCAGAGAAGCTCAGACATTTAAGGCAGTaGGTTCATTTAATGACTACT +
Preference number: 4 (lower is better)
Translates to: QHLHYPGWGRVCQSAEKLRHLRQ*VHLMTT
Trigger: AGTAGTCATTAAATGAACCCACTGCCTTAAATGTCT...GAGCTTCTCTGCAGACTGACACACCCTCCCCCACCCCGGGTAGTGGAGATGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR CAA 72 bp ATGCTACACCTAAGTGGTGCTGTGGTCCTTTTGCCTTaGTACCCTTCAGTGGCCAATGCCAGGAAGGGGTTA +
Preference number: 4 (lower is better)
Translates to: MLHLSGAVVLLP*YPSVANARKGL
Trigger: TAACCCCTTCCTGGCATTGGCCACTGAAGGGTACAAAGGCAAAAGGACCACAGCACCACTTAGGTGTAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
3UTR CAA 72 bp GGGCATCCTCGTGTCCCCAGAGACATCTCATCAAAATaGCACCACGTCAAAGGAGCTTCCTCACCATCAACT +
Preference number: 4 (lower is better)
Translates to: GHPRVPRDISSK*HHVKGASSPST
Trigger: AGTTGATGGTGAGGAAGCTCCTTTGACGTGGTGCAATTTTGATGAGATGTCTCTGGGGACACGAGGATGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp ACAGGTTGTCAGAGCAGTCACACCTGTTGGGGGACAGGCTCCTGTGACTCACTCTTCAGCACATACACCTaGTGTATAGTTCCATCGATT +
Preference number: 4 (lower is better)
Translates to: TGCQSSHTCWGTGSCDSLFSTYT*CIVPSI
Trigger: AATCGATGGAACTATACATCAGGTGTATGTGCTGAA...GAGTGAGTCACAGGAGCCTGTCCCCCAACAGGTGTGACTGCTCTGACAACCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp AACCTTTTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTAGCAAACACATGATTCTCTaGAGAGCCGGGCCCGGAACA +
Preference number: 4 (lower is better)
Translates to: NLLIDNTRPWKRAHSACSKHMIL*RAGPGT
Trigger: TGTTCCGGGCCCGGCTCTTCAGAGAATCATGTGTTT...GCTACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000443503.6
ENST00000447745.5
CDS-3UTR TCA 90 bp AGACAGGCTTCCCCAACCCTTGGCTCAGAAATAGGCTGTGCTTCAAAGGAGAAGGGGAATTGTCAACAATaGTCACTTTGCTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: RQASPTLGSEIGCASKEKGNCQQ*SLCSAP
Trigger: GGGAGCTGAGCAAAGTGATCATTGTTGACAATTCCC...CTTCTCCTTTGAAGCACAGCCTATTTCTGAGCCAAGGGTTGGGGAAGCCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR TCA 90 bp TGTCAAACAAGGAACATGGCACTGCTTAAACACCAAACTGGGAAAGGCTGCAAACCTCAAAGAAGGGGATaGGGTCCAGCAGCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: CQTRNMALLKHQTGKGCKPQRRG*GPAAPC
Trigger: ACACGGAGCTGCTGGACCTCATCCCCTTCTTTGAGG...TTTGCAGCCTTTCCCAGTTTGGTGTTTAAGCAGTGCCATGTTCCTTGTTTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR TCA 90 bp GATACTGACTGCAGTTTAAAATCCATGCTACACCTAAGTGGTGCTGTGGTCCTTTTGGGTCAGCTGCTCTaGGCTGGGATAGAAGGGGAC +
Preference number: 4 (lower is better)
Translates to: DTDCSLKSMLHLSGAVVLLGQLL*AGIEGD
Trigger: GTCCCCTTCTATCCCAGCTCAGAGCAGCTGACCCAA...AAGGACCACAGCACCACTTAGGTGTAGCATGGATTTTAAACTGCAGTCAGTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp AAAATCCATGCTACACCTAAGTGGTGCTGTGGTCCTTTTGCCTTTGTACCCTTCAGCTTGGTGGCTGGTTaGGGCCACAGGTTCTCAAGA +
Preference number: 4 (lower is better)
Translates to: KIHATPKWCCGPFAFVPFSLVAG*GHRFSR
Trigger: TCTTGAGAACCTGTGGCCTCAACCAGCCACCAAGCT...GAAGGGTACAAAGGCAAAAGGACCACAGCACCACTTAGGTGTAGCATGGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR TCA 90 bp GTGGTCCTTTTGCCTTTGTACCCTTCAGTGGCCAATGCCAGGAAGGGGTTACAGGTGGATATCAACACATaGCAGACACTTGACTGCAAC +
Preference number: 4 (lower is better)
Translates to: VVLLPLYPSVANARKGLQVDINT*QTLDCN
Trigger: GTTGCAGTCAAGTGTCTGTCATGTGTTGATATCCAC...CTGTAACCCCTTCCTGGCATTGGCCACTGAAGGGTACAAAGGCAAAAGGACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp TGTGGGAGCTCTTCCTCTCCCTGGTTTGGGGCAATGAGTCCCACATCTAGACAGGTTGAGCCACACAATTaGAGATACATTCCAAACTGG +
Preference number: 4 (lower is better)
Translates to: CGSSSSPWFGAMSPTSRQVEPHN*RYIPNW
Trigger: CCAGTTTGGAATGTATCTGCAATTGTGTGGCTCAAC...CTGTCTAGATGTGGGACTCATTGCCCCAAACCAGGGAGAGGAAGAGCTCCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp AGACAGGCTTCCCCAACCCTTGGCTCAGAAATAGGCTGTGCTTCAAAGGAGAAGGCTACACCTAAGTGGTaGTGTGGTCCTTTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: RQASPTLGSEIGCASKEKATPKW*CGPFAF
Trigger: AAAGGCAAAAGGACCACAGCACCACTTAGGTGTAGC...CTTCTCCTTTGAAGCACAGCCTATTTCTGAGCCAAGGGTTGGGGAAGCCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR GCA 90 bp AGTGGTGCTGTGGTCCTTTTGCCTTTGTACCCTTCAGTGGCCAATGCCAGGAAGCAAGGAACATGGCACTaGTTAAACACCAAACTGGGA +
Preference number: 4 (lower is better)
Translates to: SGAVVLLPLYPSVANARKQGTWH*LNTKLG
Trigger: TCCCAGTTTGGTGTTTAAGCAGTGCCATGTTCCTTG...CTTCCTGGCATTGGCCACTGAAGGGTACAAAGGCAAAAGGACCACAGCACCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR GCA 90 bp TTTGGGGCAATGAGTCCCACATCTAGACAGGCTTCCCCAACCCTTGGCTCAGAAGTCCACAGACCAAAGTaGTGTTGGGAGGATGTAATT +
Preference number: 4 (lower is better)
Translates to: FGAMSPTSRQASPTLGSEVHRPK*CWEDVI
Trigger: AATTACATCCTCCCAACAGCACTTTGGTCTGTGGAC...TTCTGAGCCAAGGGTTGGGGAAGCCTGTCTAGATGTGGGACTCATTGCCCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp GCTTCCCCAACCCTTGGCTCAGAAATAGGCTGTGCTTCAAAGGAGAAGACCAAGTTGGAACACTCAGAATaGTGGGAGACCTGTTTACCC +
Preference number: 4 (lower is better)
Translates to: ASPTLGSEIGCASKEKTKLEHSE*WETCLP
Trigger: GGGTAAACAGGTCTCCCAGCATTCTGAGTGTTCCAA...CTTGGTCTTCTCCTTTGAAGCACAGCCTATTTCTGAGCCAAGGGTTGGGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp AGTGGGCTGCAGTCCACAAACCCAAGGTGTCCTGTCCCAGAGCTCAATGTCAAAGATTTCCATCCTCTTTaGCCGCTCTTCCAAATAAGG +
Preference number: 4 (lower is better)
Translates to: SGLQSTNPRCPVPELNVKDFHPL*PLFQIR
Trigger: CCTTATTTGGAAGAGCGGGCAAAGAGGATGGAAATC...TTTGACATTGAGCTCTGGGACAGGACACCTTGGGTTTGTGGACTGCAGCCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp TTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTAGCATTTCCGAGGGTGTGTCAGTCTaGAGAGAAGCTCTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: LIDNTRPWKRAHSACSISEGVSV*REALPF
Trigger: GAAGGGAAGAGCTTCTCTGCAGACTGACACACCCTC...GGAAATGCTACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447745.5
CDS-3UTR CCA 90 bp TTAAAATCCATGCTACACCTAAGTGGTGCTGTGGTCCTTTTGCCTTTGTACCCTAGCAGTCACACCTGTTaGGGGACAGGCTCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: LKSMLHLSGAVVLLPLYPSSHTC*GTGSCD
Trigger: GTCACAGGAGCCTGTCCCCCAACAGGTGTGACTGCT...AGGGTACAAAGGCAAAAGGACCACAGCACCACTTAGGTGTAGCATGGATTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp GACACCTCTGTTTCTGACCCTGTCCGAGTTTGTAGCTTAGCAGTGAGCATATTCGTCAATTCCATTTGGTaGCAGCGCGGTAGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: DTSVSDPVRVCSLAVSIFVNSIW*QRGSSK
Trigger: CTTGCTGCTACCGCGCTGCCACCAAATGGAATTGAC...GAATATGCTCACTGCTAAGCTACAAACTCGGACAGGGTCAGAAACAGAGGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CCA 90 bp AAGGAGCTTCCTCACCATCAACTGTGGCAGGTGGCATTCCTTTTTCAGTATGCAGTCAATTCCATTTGGTaGCAGCGCGGTAGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: KELPHHQLWQVAFLFQYAVNSIW*QRGSSK
Trigger: CTTGCTGCTACCGCGCTGCCACCAAATGGAATTGAC...TGCATACTGAAAAAGGAATGCCACCTGCCACAGTTGATGGTGAGGAAGCTCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp TGTCAAACAAGGAACATGGCACTGCTTAAACACCAAACTGGGAAAGGCTGCAAATGGGCCACATCAGCTTaGTGGCTGGTTGAGGCCACA +
Preference number: 4 (lower is better)
Translates to: CQTRNMALLKHQTGKGCKWATSA*WLVEAT
Trigger: TGTGGCCTCAACCAGCCACCAAGCTGATGTGGCCCA...TTTGCAGCCTTTCCCAGTTTGGTGTTTAAGCAGTGCCATGTTCCTTGTTTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CCA 90 bp TCTGATACTGACTGCAGTTTAAAATCCATGCTACACCTAAGTGGTGCTGTGGTCTGGGCCACATCAGCTTaGTGGCTGGTTGAGGCCACA +
Preference number: 4 (lower is better)
Translates to: SDTDCSLKSMLHLSGAVVWATSA*WLVEAT
Trigger: TGTGGCCTCAACCAGCCACCAAGCTGATGTGGCCCA...GACCACAGCACCACTTAGGTGTAGCATGGATTTTAAACTGCAGTCAGTATCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CCA 90 bp TCCCCAACCCTTGGCTCAGAAATAGGCTGTGCTTCAAAGGAGAAGACCAAGAGAGAGAAGACCAAGAGATaGACTTGGGCCACATCAGCT +
Preference number: 4 (lower is better)
Translates to: SPTLGSEIGCASKEKTKREKTKR*TWATSA
Trigger: AGCTGATGTGGCCCAAGTCCATCTCTTGGTCTTCTC...TCTCTTGGTCTTCTCCTTTGAAGCACAGCCTATTTCTGAGCCAAGGGTTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CCA 90 bp GACTGCAGTTTAAAATCCATGCTACACCTAAGTGGTGCTGTGGTCCTTTTGCCTAGCTCTTCCTCTCCCTaGTTTGGGGCAATGAGTCCC +
Preference number: 4 (lower is better)
Translates to: DCSLKSMLHLSGAVVLLPSSSSP*FGAMSP
Trigger: GGGACTCATTGCCCCAAACCAGGGAGAGGAAGAGCT...AGGCAAAAGGACCACAGCACCACTTAGGTGTAGCATGGATTTTAAACTGCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CCA 90 bp CTTTTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTAGCATTCTAACAGCTCCGCACTaGCTTAGTGCAGTGGTGCTC +
Preference number: 4 (lower is better)
Translates to: LLIDNTRPWKRAHSACSILTAPH*LSAVVL
Trigger: GAGCACCACTGCACTAAGCCAGTGCGGAGCTGTTAG...AATGCTACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp GGCCACAGGTTCTCAAGAGAGAACAGTCAGCTTATTTATCAAACAGGATCTGATCCTCAGAGGGCCTGCTaGCCCTCTCCAGACATTCTG +
Preference number: 4 (lower is better)
Translates to: GHRFSRENSQLIYQTGSDPQRAC*PSPDIL
Trigger: CAGAATGTCTGGAGAGGGCCAGCAGGCCCTCTGAGG...ATCAGATCCTGTTTGATAAATAAGCTGACTGTTCTCTCTTGAGAACCTGTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp TTTGGCAGGAAGGAAATCATTGCAAACCTTTTGATTGACAATACTCGCCCCTGGCCTGTGCACTTCCACTaGAGGCCTGGCCAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: FGRKEIIANLLIDNTRPWPVHFH*RPGQRS
Trigger: ACTTCTCTGGCCAGGCCTCCAGTGGAAGTGCACAGG...CCAGGGGCGAGTATTGTCAATCAAAAGGTTTGCAATGATTTCCTTCCTGCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp GTGGTCCTTTTGCCTTTGTACCCTTCAGTGGCCAATGCCAGGAAGGGGTTACAGCAAACAGCTAATGCATaGAACCACAGACCAACACGT +
Preference number: 4 (lower is better)
Translates to: VVLLPLYPSVANARKGLQQTANA*NHRPTR
Trigger: ACGTGTTGGTCTGTGGTTCCATGCATTAGCTGTTTG...CTGTAACCCCTTCCTGGCATTGGCCACTGAAGGGTACAAAGGCAAAAGGACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp GCTTCCCCAACCCTTGGCTCAGAAATAGGCTGTGCTTCAAAGGAGAAGACCAAGCCTCACCATCAACTGTaGCAGGTGGCATTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: ASPTLGSEIGCASKEKTKPHHQL*QVAFLF
Trigger: AAAAAGGAATGCCACCTGCCACAGTTGATGGTGAGG...CTTGGTCTTCTCCTTTGAAGCACAGCCTATTTCTGAGCCAAGGGTTGGGGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp GACACCTCTGTTTCTGACCCTGTCCGAGTTTGTAGCTTAGCAGTGAGCATATTCACTCTTCTCGAACCCTaGCATGCCAACTGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: DTSVSDPVRVCSLAVSIFTLLEP*HANCPA
Trigger: TGCTGGACAGTTGGCATGCCAGGGTTCGAGAAGAGT...GAATATGCTCACTGCTAAGCTACAAACTCGGACAGGGTCAGAAACAGAGGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR CAA 72 bp AAATCCATGCTACACCTAAGTGGTGCTGTGGTCCTTTaGCCTTTGTACCCTTCAGTGGCCAATGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: KSMLHLSGAVVL*PLYPSVANARK
Trigger: CTTCCTGGCATTGGCCACTGAAGGGTACAAAGGCAAAAGGACCACAGCACCACTTAGGTGTAGCATGGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR TCA 90 bp TCTGATACTGACTGCAGTTTAAAATCCATGCTACACCTAAGTGGTGCTGTGGTCGACTTGGTATGGGAATaGCCTGCCTCTGGTCACCCT +
Preference number: 4 (lower is better)
Translates to: SDTDCSLKSMLHLSGAVVDLVWE*PASGHP
Trigger: AGGGTGACCAGAGGCAGGTCATTCCCATACCAAGTC...GACCACAGCACCACTTAGGTGTAGCATGGATTTTAAACTGCAGTCAGTATCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273179.10
CDS-3UTR TCA 90 bp CTCTCATTAGGGCCTAATTCTGTGTGGATATCAACACATGACAGACACTTGACTTTGGGTCAGCTGCTCTaGGCTGGGATAGAAGGGGAC +
Preference number: 4 (lower is better)
Translates to: LSLGPNSVWISTHDRHLTLGQLL*AGIEGD
Trigger: GTCCCCTTCTATCCCAGCTCAGAGCAGCTGACCCAA...AGTCAAGTGTCTGTCATGTGTTGATATCCACACAGAATTAGGCCCTAATGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp TGTGGGAGCTCTTCCTCTCCCTGGTTTGGGGCAATGAGTCCCACATCTAGACAGTTCAAGGAGAAAATGTaGCCTCAAGACAAACTTGTC +
Preference number: 4 (lower is better)
Translates to: CGSSSSPWFGAMSPTSRQFKEKM*PQDKLV
Trigger: GACAAGTTTGTCTTGAGGTCACATTTTCTCCTTGAA...CTGTCTAGATGTGGGACTCATTGCCCCAAACCAGGGAGAGGAAGAGCTCCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp AGTGGGCTGCAGTCCACAAACCCAAGGTGTCCTGTCCCAGAGCTCAATGTCAAATACTTACTTCCCTTCTaGATATTCACACAGCAGTCC +
Preference number: 4 (lower is better)
Translates to: SGLQSTNPRCPVPELNVKYLLPF*IFTQQS
Trigger: GGACTGCTGTGTGAATATTCAGAAGGGAAGTAAGTA...TTTGACATTGAGCTCTGGGACAGGACACCTTGGGTTTGTGGACTGCAGCCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp TCTGATACTGACTGCAGTTTAAAATCCATGCTACACCTAAGTGGTGCTGTGGTCCCAAATAAGGCCCTGTaGTGCCAACGAAGGGGGCAT +
Preference number: 4 (lower is better)
Translates to: SDTDCSLKSMLHLSGAVVPNKAL*CQRRGH
Trigger: ATGCCCCCTTCGTTGGCATCACAGGGCCTTATTTGG...GACCACAGCACCACTTAGGTGTAGCATGGATTTTAAACTGCAGTCAGTATCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp TTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTAGCATTTCCTCCAGCAGAAATCCATaGCTACCCAGACACCAGCAT +
Preference number: 4 (lower is better)
Translates to: LIDNTRPWKRAHSACSISSSRNP*LPRHQH
Trigger: ATGCTGGTGTCTGGGTAGTCATGGATTTCTGCTGGA...GGAAATGCTACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000443503.6
ENST00000447745.5
CDS-3UTR TCA 90 bp ACTACGGCATCTTTATTCATAGCAGCCTGCGGATCCGAAAACTCACACCCTTCCTGGAGCAGCTGGCATTaGAAATGGACACTTTTTCCC +
Preference number: 4 (lower is better)
Translates to: TTASLFIAACGSENSHPSWSSWH*KWTLFP
Trigger: GGGAAAAAGTGTCCATTTTCAATGCCAGCTGCTCCA...GGAAGGGTGTGAGTTTTCGGATCCGCAGGCTGCTATGAATAAAGATGCCGTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416688.5
CDS-3UTR GCA 90 bp GCAAACCTTTTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTATGCTGCGGCTCCTCTaGTTCTTTAAGCTGACGTTG +
Preference number: 4 (lower is better)
Translates to: ANLLIDNTRPWKRAHSACMLRLL*FFKLTL
Trigger: CAACGTCAGCTTAAAGAAGCAGAGGAGCCGCAGCAT...ACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp GCATATTCTGAGCATAGGCACAGTGGCAAAGAACAGTGTAACAGCCGCTGGTCATTGGAACACTCAGAATaGTGGGAGACCTGTTTACCC +
Preference number: 4 (lower is better)
Translates to: AYSEHRHSGKEQCNSRWSLEHSE*WETCLP
Trigger: GGGTAAACAGGTCTCCCAGCATTCTGAGTGTTCCAA...TGACCAGCGGCTGTTACACTGTTCTTTGCCACTGTGCCTATGCTCAGAATATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp TCCCCAACCCTTGGCTCAGAAATAGGCTGTGCTTCAAAGGAGAAGACCAAGAGAGGCTTAGTGCAGTGGTaGTCACAGTTTCAGGAACTA +
Preference number: 4 (lower is better)
Translates to: SPTLGSEIGCASKEKTKRGLVQW*SQFQEL
Trigger: TAGTTCCTGAAACTGTGAGCACCACTGCACTAAGCC...TCTCTTGGTCTTCTCCTTTGAAGCACAGCCTATTTCTGAGCCAAGGGTTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp GCATATTCTGAGCATAGGCACAGTGGCAAAGAACAGTGTAACAGCCGCTGGTCAAACATCATAGTGGGCTaGAGTCCACAAACCCAAGGT +
Preference number: 4 (lower is better)
Translates to: AYSEHRHSGKEQCNSRWSNIIVG*SPQTQG
Trigger: ACCTTGGGTTTGTGGACTGCAGCCCACTATGATGTT...TGACCAGCGGCTGTTACACTGTTCTTTGCCACTGTGCCTATGCTCAGAATATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp TGTGGGAGCTCTTCCTCTCCCTGGTTTGGGGCAATGAGTCCCACATCTAGACAGCAAAAGTTCAAATGCTaGAACCATGACAAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: CGSSSSPWFGAMSPTSRQQKFKC*NHDKSA
Trigger: TGCTGACTTGTCATGGTTGCAGCATTTGAACTTTTG...CTGTCTAGATGTGGGACTCATTGCCCCAAACCAGGGAGAGGAAGAGCTCCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp GGCATCTTTATTCATAGCAGCCTGCGGATCCGAAAACTCACACCCTTCCCCCTTGTGGCATTTTCCTGTTaGCTGCTGATGTATAGTTCC +
Preference number: 4 (lower is better)
Translates to: GIFIHSSLRIRKLTPFPLVAFSC*LLMYSS
Trigger: GGAACTATACATCAGCAGGCAACAGGAAAATGCCAC...AAGGGGGAAGGGTGTGAGTTTTCGGATCCGCAGGCTGCTATGAATAAAGATGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000416688.5
CDS-3UTR CCA 90 bp GATACTGACTGCAGTTTAAAATCCATGCTACACCTAAGTGGTGCTGTGGTCCTTTCAGCTGCTCTGAGCTaGGATAGAAGGGGACAGGTG +
Preference number: 4 (lower is better)
Translates to: DTDCSLKSMLHLSGAVVLSAALS*DRRGQV
Trigger: CACCTGTCCCCTTCTATCCCAGCTCAGAGCAGCTGA...AAGGACCACAGCACCACTTAGGTGTAGCATGGATTTTAAACTGCAGTCAGTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp ATGCCAACTGTCCAGCACAGCACCTTTAAAAGCAGAGGCACAAACGTAGGATTGCAGTGTAACAGCCGCTaGTCAATTCCATTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: MPTVQHSTFKSRGTNVGLQCNSR*SIPFGG
Trigger: GCCACCAAATGGAATTGACCAGCGGCTGTTACACTG...CAATCCTACGTTTGTGCCTCTGCTTTTAAAGGTGCTGTGCTGGACAGTTGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp TTAAAATCCATGCTACACCTAAGTGGTGCTGTGGTCCTTTTGCCTTTGTACCCTGGAAGGGGTTACAGGTaGTGGAGGCTGCAATGGGAT +
Preference number: 4 (lower is better)
Translates to: LKSMLHLSGAVVLLPLYPGRGYR*WRLQWD
Trigger: ATCCCATTGCAGCCTCCACCACCTGTAACCCCTTCC...AGGGTACAAAGGCAAAAGGACCACAGCACCACTTAGGTGTAGCATGGATTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CCA 90 bp GACTGCAGTTTAAAATCCATGCTACACCTAAGTGGTGCTGTGGTCCTTTTGCCTCTTTGTACCCTTCAGTaGCCAATGCCAGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: DCSLKSMLHLSGAVVLLPLCTLQ*PMPGRG
Trigger: ACCCCTTCCTGGCATTGGCCACTGAAGGGTACAAAG...AGGCAAAAGGACCACAGCACCACTTAGGTGTAGCATGGATTTTAAACTGCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CCA 90 bp AACCTTTTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTAGCCATGCTACACCTAAGTaGTGCTGTGGTCCTTTTGCC +
Preference number: 4 (lower is better)
Translates to: NLLIDNTRPWKRAHSACSHATPK*CCGPFA
Trigger: GGCAAAAGGACCACAGCACCACTTAGGTGTAGCATG...GCTACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp AGAATTTTGGAGTGTGGTCAAATAAGGTGCACAGATTCCAGAACCCTCAGAGGGTTCCTCTCCCTGGTTTaGGGCAATGAGTCCCACATC +
Preference number: 4 (lower is better)
Translates to: RILECGQIRCTDSRTLRGFLSLV*GNESHI
Trigger: GATGTGGGACTCATTGCCCCAAACCAGGGAGAGGAA...CCCTCTGAGGGTTCTGGAATCTGTGCACCTTATTTGACCACACTCCAAAATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp CTTTTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTAGCATTTTCCTCTCCCTGGTTTaGGGCAATGAGTCCCACATC +
Preference number: 4 (lower is better)
Translates to: LLIDNTRPWKRAHSACSIFLSLV*GNESHI
Trigger: GATGTGGGACTCATTGCCCCAAACCAGGGAGAGGAA...AATGCTACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp GGATGGGACACCTCTGTTTCTGACCCTGTCCGAGTTTGTAGCTTAGCAGTGAGCGGGCCTAATTCTGTGTaGATATCAACACATGACAGA +
Preference number: 4 (lower is better)
Translates to: GWDTSVSDPVRVCSLAVSGPNSV*ISTHDR
Trigger: TCTGTCATGTGTTGATATCCACACAGAATTAGGCCC...GCTCACTGCTAAGCTACAAACTCGGACAGGGTCAGAAACAGAGGTGTCCCATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp GCATATTCTGAGCATAGGCACAGTGGCAAAGAACAGTGTAACAGCCGCTGGTCACCTCACCATCAACTGTaGCAGGTGGCATTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: AYSEHRHSGKEQCNSRWSPHHQL*QVAFLF
Trigger: AAAAAGGAATGCCACCTGCCACAGTTGATGGTGAGG...TGACCAGCGGCTGTTACACTGTTCTTTGCCACTGTGCCTATGCTCAGAATATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp GACTGCAGTTTAAAATCCATGCTACACCTAAGTGGTGCTGTGGTCCTTTTGCCTACTCTTCTCGAACCCTaGCATGCCAACTGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: DCSLKSMLHLSGAVVLLPTLLEP*HANCPA
Trigger: TGCTGGACAGTTGGCATGCCAGGGTTCGAGAAGAGT...AGGCAAAAGGACCACAGCACCACTTAGGTGTAGCATGGATTTTAAACTGCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp GATACTGACTGCAGTTTAAAATCCATGCTACACCTAAGTGGTGCTGTGGTCCTTAAACACATGATTCTCTaGAGAGCCGGGCCCGGAACA +
Preference number: 4 (lower is better)
Translates to: DTDCSLKSMLHLSGAVVLKHMIL*RAGPGT
Trigger: TGTTCCGGGCCCGGCTCTTCAGAGAATCATGTGTTT...AAGGACCACAGCACCACTTAGGTGTAGCATGGATTTTAAACTGCAGTCAGTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp GACACCTCTGTTTCTGACCCTGTCCGAGTTTGTAGCTTAGCAGTGAGCATATTCACGATGAAAAACACATaGTTCTCTGAAGAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: DTSVSDPVRVCSLAVSIFTMKNT*FSEEPG
Trigger: GCCCGGCTCTTCAGAGAATCATGTGTTTTTCATCGT...GAATATGCTCACTGCTAAGCTACAAACTCGGACAGGGTCAGAAACAGAGGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp GCAAACCTTTTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTACGATGAAAAACACATaGTTCTCTGAAGAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: ANLLIDNTRPWKRAHSACTMKNT*FSEEPG
Trigger: GCCCGGCTCTTCAGAGAATCATGTGTTTTTCATCGT...ACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000443503.6
ENST00000447745.5
CDS-3UTR TCA 90 bp AACCTTTTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTAGCGGGAATTGTCAACAATaGTCACTTTGCTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: NLLIDNTRPWKRAHSACSGNCQQ*SLCSAP
Trigger: GGGAGCTGAGCAAAGTGATCATTGTTGACAATTCCC...GCTACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000443503.6
ENST00000447745.5
CDS-3UTR TCA 90 bp GCAAACCTTTTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTAGGATGGAAGATGTATaGGGCAGGGGAATTGTCAAC +
Preference number: 4 (lower is better)
Translates to: ANLLIDNTRPWKRAHSACRMEDV*GRGIVN
Trigger: GTTGACAATTCCCCTGCCTCATACATCTTCCATCCT...ACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000443503.6
ENST00000447745.5
CDS-3UTR TCA 90 bp TTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTAGCATTTCCAGGATGGAAGATGTATaGGGCAGGGGAATTGTCAAC +
Preference number: 4 (lower is better)
Translates to: LIDNTRPWKRAHSACSISRMEDV*GRGIVN
Trigger: GTTGACAATTCCCCTGCCTCATACATCTTCCATCCT...GGAAATGCTACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000443503.6
ENST00000447745.5
CDS-3UTR TCA 90 bp AGTGGGCTGCAGTCCACAAACCCAAGGTGTCCTGTCCCAGAGCTCAATGTCAAATGTTTCCTAAAGTGTTaGGCCACACAATTGCAGATA +
Preference number: 4 (lower is better)
Translates to: SGLQSTNPRCPVPELNVKCFLKC*ATQLQI
Trigger: TATCTGCAATTGTGTGGCTCAACACTTTAGGAAACA...TTTGACATTGAGCTCTGGGACAGGACACCTTGGGTTTGTGGACTGCAGCCCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp AGTGGGCTGCAGTCCACAAACCCAAGGTGTCCTGTCCCAGAGCTCAATGTCAAATTCAAGGAGAAAATGTaGCCTCAAGACAAACTTGTC +
Preference number: 4 (lower is better)
Translates to: SGLQSTNPRCPVPELNVKFKEKM*PQDKLV
Trigger: GACAAGTTTGTCTTGAGGTCACATTTTCTCCTTGAA...TTTGACATTGAGCTCTGGGACAGGACACCTTGGGTTTGTGGACTGCAGCCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp ATGCCAACTGTCCAGCACAGCACCTTTAAAAGCAGAGGCACAAACGTAGGATTGGACCTGTTTACCCCCTaGATACTTACTTCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: MPTVQHSTFKSRGTNVGLDLFTP*ILTSLL
Trigger: CAGAAGGGAAGTAAGTATTCAGGGGGTAAACAGGTC...CAATCCTACGTTTGTGCCTCTGCTTTTAAAGGTGCTGTGCTGGACAGTTGGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp TCCCCAACCCTTGGCTCAGAAATAGGCTGTGCTTCAAAGGAGAAGACCAAGAGACAAATGCTGCAACCATaGCAAGTCAGCATCATTAGG +
Preference number: 4 (lower is better)
Translates to: SPTLGSEIGCASKEKTKRQMLQP*QVSIIR
Trigger: CCTAATGATGCTGACTTGTCATGGTTGCAGCATTTG...TCTCTTGGTCTTCTCCTTTGAAGCACAGCCTATTTCTGAGCCAAGGGTTGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp AACCTTTTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTAGCGAAGCTCTTCCCTTCTaGATATTCACACAGCAGTCC +
Preference number: 4 (lower is better)
Translates to: NLLIDNTRPWKRAHSACSEALPF*IFTQQS
Trigger: GGACTGCTGTGTGAATATTCAGAAGGGAAGAGCTTC...GCTACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447745.5
CDS-3UTR GCA 90 bp CTCTCATTAGGGCCTAATTCTGTGTGGATATCAACACATGACAGACACTTGACTAGAGTCTGTGCAGCATaGTGTACACGTCGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: LSLGPNSVWISTHDRHLTRVCAA*CTRRPP
Trigger: GGGAGGACGACGTGTACAGCATGCTGCACAGACTCT...AGTCAAGTGTCTGTCATGTGTTGATATCCACACAGAATTAGGCCCTAATGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp AGGAAGGAAATCATTGCAAACCTTTTGATTGACAATACTCGCCCCTGGAAACGTAGAGTCTGTGCAGCATaGTGTACACGTCGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: RKEIIANLLIDNTRPWKRRVCAA*CTRRPP
Trigger: GGGAGGACGACGTGTACAGCATGCTGCACAGACTCT...ACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTTTGCAATGATTTCCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000443503.6
ENST00000447745.5
CDS-3UTR GCA 90 bp GCTTCCCCAACCCTTGGCTCAGAAATAGGCTGTGCTTCAAAGGAGAAGACCAAGCTCAGAAATAGGCTGTaGTTCAAAGGAGAAGACCAA +
Preference number: 4 (lower is better)
Translates to: ASPTLGSEIGCASKEKTKLRNRL*FKGEDQ
Trigger: TTGGTCTTCTCCTTTGAAGCACAGCCTATTTCTGAG...CTTGGTCTTCTCCTTTGAAGCACAGCCTATTTCTGAGCCAAGGGTTGGGGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR GCA 90 bp ACAGGCTTCCCCAACCCTTGGCTCAGAAATAGGCTGTGCTTCAAAGGAGAAGACCTCAGAAATAGGCTGTaGTTCAAAGGAGAAGACCAA +
Preference number: 4 (lower is better)
Translates to: TGFPNPWLRNRLCFKGEDLRNRL*FKGEDQ
Trigger: TTGGTCTTCTCCTTTGAAGCACAGCCTATTTCTGAG...GTCTTCTCCTTTGAAGCACAGCCTATTTCTGAGCCAAGGGTTGGGGAAGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR GCA 90 bp GACACCTCTGTTTCTGACCCTGTCCGAGTTTGTAGCTTAGCAGTGAGCATATTCTGTCTGGCTCAAGTCTaGCAAGTGTCTTCACTCCAT +
Preference number: 4 (lower is better)
Translates to: DTSVSDPVRVCSLAVSIFCLAQV*QVSSLH
Trigger: ATGGAGTGAAGACACTTGGCAGACTTGAGCCAGACA...GAATATGCTCACTGCTAAGCTACAAACTCGGACAGGGTCAGAAACAGAGGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp AGTGGTGCTGTGGTCCTTTTGCCTTTGTACCCTTCAGTGGCCAATGCCAGGAAGCAAAAGTTCAAATGCTaGAACCATGACAAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: SGAVVLLPLYPSVANARKQKFKC*NHDKSA
Trigger: TGCTGACTTGTCATGGTTGCAGCATTTGAACTTTTG...CTTCCTGGCATTGGCCACTGAAGGGTACAAAGGCAAAAGGACCACAGCACCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp CCTAAGTGGTGCTGTGGTCCTTTTGCCTTTGTACCCTTCAGTGGCCAATGCCAGCACCAAAAGTTCAAATaGTGCAACCATGACAAGTCA +
Preference number: 4 (lower is better)
Translates to: PKWCCGPFAFVPFSGQCQHQKFK*CNHDKS
Trigger: TGACTTGTCATGGTTGCAGCATTTGAACTTTTGGTG...CTGGCATTGGCCACTGAAGGGTACAAAGGCAAAAGGACCACAGCACCACTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp GCATCTTTATTCATAGCAGCCTGCGGATCCGAAAACTCACACCCTTCCCCCTTTTTATTCATAGCAGCCTaGGGATCCGAAAACTCACAC +
Preference number: 4 (lower is better)
Translates to: ASLFIAACGSENSHPSPFLFIAA*GSENSH
Trigger: GTGTGAGTTTTCGGATCCGCAGGCTGCTATGAATAA...AAAGGGGGAAGGGTGTGAGTTTTCGGATCCGCAGGCTGCTATGAATAAAGATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000416688.5
CDS-3UTR CCA 90 bp TTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTAGCATTTCCAAAGAGATTCTGAGTTaGGTCAGCTGCTCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: LIDNTRPWKRAHSACSISKEILS*VSCSEL
Trigger: CAGCTCAGAGCAGCTGACCCAACTCAGAATCTCTTT...GGAAATGCTACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp GACTGCAGTTTAAAATCCATGCTACACCTAAGTGGTGCTGTGGTCCTTTTGCCTGAGAAGACCAAGAGATaGACTTGGGCCACATCAGCT +
Preference number: 4 (lower is better)
Translates to: DCSLKSMLHLSGAVVLLPEKTKR*TWATSA
Trigger: AGCTGATGTGGCCCAAGTCCATCTCTTGGTCTTCTC...AGGCAAAAGGACCACAGCACCACTTAGGTGTAGCATGGATTTTAAACTGCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CCA 90 bp AAAATCCATGCTACACCTAAGTGGTGCTGTGGTCCTTTTGCCTTTGTACCCTTCGAGAAGACCAAGAGATaGACTTGGGCCACATCAGCT +
Preference number: 4 (lower is better)
Translates to: KIHATPKWCCGPFAFVPFEKTKR*TWATSA
Trigger: AGCTGATGTGGCCCAAGTCCATCTCTTGGTCTTCTC...GAAGGGTACAAAGGCAAAAGGACCACAGCACCACTTAGGTGTAGCATGGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CCA 90 bp AGGAAGGAAATCATTGCAAACCTTTTGATTGACAATACTCGCCCCTGGAAACGTCTCCCACCAGAATGCTaGCTGAAGACCAACCCACAG +
Preference number: 4 (lower is better)
Translates to: RKEIIANLLIDNTRPWKRLPPEC*LKTNPQ
Trigger: CTGTGGGTTGGTCTTCAGCCAGCATTCTGGTGGGAG...ACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTTTGCAATGATTTCCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp AAGACCAAGAGATGGACTTGGGCCACATCAGCTTGGTGGCTGGTTGAGGCCACAGATGTAATTGGCAGCTaGCTTCATTACTTTGTGAAT +
Preference number: 4 (lower is better)
Translates to: KTKRWTWATSAWWLVEATDVIGS*LHYFVN
Trigger: ATTCACAAAGTAATGAAGCCAGCTGCCAATTACATC...TGTGGCCTCAACCAGCCACCAAGCTGATGTGGCCCAAGTCCATCTCTTGGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp GACTGCAGTTTAAAATCCATGCTACACCTAAGTGGTGCTGTGGTCCTTTTGCCTGAACACTCAGAATGCTaGGAGACCTGTTTACCCCCT +
Preference number: 4 (lower is better)
Translates to: DCSLKSMLHLSGAVVLLPEHSEC*ETCLPP
Trigger: AGGGGGTAAACAGGTCTCCCAGCATTCTGAGTGTTC...AGGCAAAAGGACCACAGCACCACTTAGGTGTAGCATGGATTTTAAACTGCAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp ACAGGCTTCCCCAACCCTTGGCTCAGAAATAGGCTGTGCTTCAAAGGAGAAGACGGGCCTAATTCTGTGTaGATATCAACACATGACAGA +
Preference number: 4 (lower is better)
Translates to: TGFPNPWLRNRLCFKGEDGPNSV*ISTHDR
Trigger: TCTGTCATGTGTTGATATCCACACAGAATTAGGCCC...GTCTTCTCCTTTGAAGCACAGCCTATTTCTGAGCCAAGGGTTGGGGAAGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp TTTGGCAGGAAGGAAATCATTGCAAACCTTTTGATTGACAATACTCGCCCCTGGGACAATACTCGCCCCTaGAAACGTGCACATTCCGCA +
Preference number: 4 (lower is better)
Translates to: FGRKEIIANLLIDNTRPWDNTRP*KRAHSA
Trigger: TGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTC...CCAGGGGCGAGTATTGTCAATCAAAAGGTTTGCAATGATTTCCTTCCTGCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000443503.6
ENST00000447745.5
CDS-3UTR TCA 90 bp ATGGGATGGGACACCTCTGTTTCTGACCCTGTCCGAGTTTGTAGCTTAGCAGTGTTCAGCACATACACCTaGTGTATAGTTCCATCGATT +
Preference number: 4 (lower is better)
Translates to: MGWDTSVSDPVRVCSLAVFSTYT*CIVPSI
Trigger: AATCGATGGAACTATACATCAGGTGTATGTGCTGAA...CACTGCTAAGCTACAAACTCGGACAGGGTCAGAAACAGAGGTGTCCCATCCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp TGTCAAACAAGGAACATGGCACTGCTTAAACACCAAACTGGGAAAGGCTGCAAAGTAGGAAAGAGATTCTaGGTTGGGTCAGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: CQTRNMALLKHQTGKGCKVGKRF*VGSAAL
Trigger: CAGAGCAGCTGACCCAACTCAGAATCTCTTTCCTAC...TTTGCAGCCTTTCCCAGTTTGGTGTTTAAGCAGTGCCATGTTCCTTGTTTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp GACACCTCTGTTTCTGACCCTGTCCGAGTTTGTAGCTTAGCAGTGAGCATATTCCAAATGCTGCAACCATaGCAAGTCAGCATCATTAGG +
Preference number: 4 (lower is better)
Translates to: DTSVSDPVRVCSLAVSIFQMLQP*QVSIIR
Trigger: CCTAATGATGCTGACTTGTCATGGTTGCAGCATTTG...GAATATGCTCACTGCTAAGCTACAAACTCGGACAGGGTCAGAAACAGAGGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp ATGAGTCCCACATCTAGACAGGCTTCCCCAACCCTTGGCTCAGAAATAGGCTGTGAACAGGAACAGACATaGTCAAAGTTACAGTACAGT +
Preference number: 4 (lower is better)
Translates to: MSPTSRQASPTLGSEIGCEQEQT*SKLQYS
Trigger: ACTGTACTGTAACTTTGATCATGTCTGTTCCTGTTC...ACAGCCTATTTCTGAGCCAAGGGTTGGGGAAGCCTGTCTAGATGTGGGACTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp GCAAACCTTTTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTTGCAAACCTTTTGATTaGCAATACTCGCCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: ANLLIDNTRPWKRAHSACCKPFD*QYSPLE
Trigger: TTCCAGGGGCGAGTATTGTCAATCAAAAGGTTTGCA...ACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000443503.6
ENST00000447745.5
CDS-3UTR TCA 90 bp GCATATTCTGAGCATAGGCACAGTGGCAAAGAACAGTGTAACAGCCGCTGGTCATCATTGCAAACCTTTTaGTTGACAATACTCGCCCCT +
Preference number: 4 (lower is better)
Translates to: AYSEHRHSGKEQCNSRWSSLQTF*LTILAP
Trigger: AGGGGCGAGTATTGTCAATCAAAAGGTTTGCAATGA...TGACCAGCGGCTGTTACACTGTTCTTTGCCACTGTGCCTATGCTCAGAATATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp TTTGGCAGGAAGGAAATCATTGCAAACCTTTTGATTGACAATACTCGCCCCTGGATGCTGCGGCTCCTCTaGTTCTTTAAGCTGACGTTG +
Preference number: 4 (lower is better)
Translates to: FGRKEIIANLLIDNTRPWMLRLL*FFKLTL
Trigger: CAACGTCAGCTTAAAGAAGCAGAGGAGCCGCAGCAT...CCAGGGGCGAGTATTGTCAATCAAAAGGTTTGCAATGATTTCCTTCCTGCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp TTTGGCAGGAAGGAAATCATTGCAAACCTTTTGATTGACAATACTCGCCCCTGGCTATTGCAGAGTCTGTaGAGCATGCTGTACACGTCG +
Preference number: 4 (lower is better)
Translates to: FGRKEIIANLLIDNTRPWLLQSL*SMLYTS
Trigger: CGACGTGTACAGCATGCTGCACAGACTCTGCAATAG...CCAGGGGCGAGTATTGTCAATCAAAAGGTTTGCAATGATTTCCTTCCTGCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000443503.6
ENST00000447745.5
CDS-3UTR GCA 90 bp GTGGTCCTTTTGCCTTTGTACCCTTCAGTGGCCAATGCCAGGAAGGGGTTACAGGGATCTGATACTGACTaGAGTTTAAAATCCATGCTA +
Preference number: 4 (lower is better)
Translates to: VVLLPLYPSVANARKGLQGSDTD*SLKSML
Trigger: TAGCATGGATTTTAAACTGCAGTCAGTATCAGATCC...CTGTAACCCCTTCCTGGCATTGGCCACTGAAGGGTACAAAGGCAAAAGGACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR GCA 90 bp AGGAAGGAAATCATTGCAAACCTTTTGATTGACAATACTCGCCCCTGGAAACGTTCACTCCCACCAGAATaGTGGCTGAAGACCAACCCA +
Preference number: 4 (lower is better)
Translates to: RKEIIANLLIDNTRPWKRSLPPE*WLKTNP
Trigger: TGGGTTGGTCTTCAGCCAGCATTCTGGTGGGAGTGA...ACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTTTGCAATGATTTCCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp GACACCTCTGTTTCTGACCCTGTCCGAGTTTGTAGCTTAGCAGTGAGCATATTCGTCCACAGACCAAAGTaGTGTTGGGAGGATGTAATT +
Preference number: 4 (lower is better)
Translates to: DTSVSDPVRVCSLAVSIFVHRPK*CWEDVI
Trigger: AATTACATCCTCCCAACAGCACTTTGGTCTGTGGAC...GAATATGCTCACTGCTAAGCTACAAACTCGGACAGGGTCAGAAACAGAGGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp AACCTTTTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTAGCTGGCTTCATTACTATTaGAGAGTCTGTGCAGCATGC +
Preference number: 4 (lower is better)
Translates to: NLLIDNTRPWKRAHSACSWLHYY*RVCAAC
Trigger: GCATGCTGCACAGACTCTGCAATAGTAATGAAGCCA...GCTACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447745.5
CDS-3UTR CCA 90 bp TCTGATACTGACTGCAGTTTAAAATCCATGCTACACCTAAGTGGTGCTGTGGTCCTTAGCTGGTGGACTTaGTATGGGAATGACCTGCCT +
Preference number: 4 (lower is better)
Translates to: SDTDCSLKSMLHLSGAVVLSWWT*YGNDLP
Trigger: AGGCAGGTCATTCCCATACCAAGTCCACCAGCTAAG...GACCACAGCACCACTTAGGTGTAGCATGGATTTTAAACTGCAGTCAGTATCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273179.10
CDS-3UTR CCA 90 bp TTAAAATCCATGCTACACCTAAGTGGTGCTGTGGTCCTTTTGCCTTTGTACCCTAAGCACCGTCACCTCTaGAAGAAGGTACTTAGCTGG +
Preference number: 4 (lower is better)
Translates to: LKSMLHLSGAVVLLPLYPKHRHL*KKVLSW
Trigger: CCAGCTAAGTACCTTCTTCCAGAGGTGACGGTGCTT...AGGGTACAAAGGCAAAAGGACCACAGCACCACTTAGGTGTAGCATGGATTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp AAAATCCATGCTACACCTAAGTGGTGCTGTGGTCCTTTTGCCTTTGTACCCTTCAAAGAGATTCTGAGTTaGGTCAGCTGCTCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: KIHATPKWCCGPFAFVPFKEILS*VSCSEL
Trigger: CAGCTCAGAGCAGCTGACCCAACTCAGAATCTCTTT...GAAGGGTACAAAGGCAAAAGGACCACAGCACCACTTAGGTGTAGCATGGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp TTAAAATCCATGCTACACCTAAGTGGTGCTGTGGTCCTTTTGCCTTTGTACCCTCAGTGTAACAGCCGCTaGTCAATTCCATTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: LKSMLHLSGAVVLLPLYPQCNSR*SIPFGG
Trigger: GCCACCAAATGGAATTGACCAGCGGCTGTTACACTG...AGGGTACAAAGGCAAAAGGACCACAGCACCACTTAGGTGTAGCATGGATTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CCA 90 bp GGCCACAGGTTCTCAAGAGAGAACAGTCAGCTTATTTATCAAACAGGATCTGATTGGTGGAGGCTGCAATaGGATGGGACACCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: GHRFSRENSQLIYQTGSDWWRLQ*DGTPLF
Trigger: AAACAGAGGTGTCCCATCCCATTGCAGCCTCCACCA...ATCAGATCCTGTTTGATAAATAAGCTGACTGTTCTCTCTTGAGAACCTGTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CCA 90 bp TTTGGCAGGAAGGAAATCATTGCAAACCTTTTGATTGACAATACTCGCCCCTGGGAACACTCAGAATGCTaGGAGACCTGTTTACCCCCT +
Preference number: 4 (lower is better)
Translates to: FGRKEIIANLLIDNTRPWEHSEC*ETCLPP
Trigger: AGGGGGTAAACAGGTCTCCCAGCATTCTGAGTGTTC...CCAGGGGCGAGTATTGTCAATCAAAAGGTTTGCAATGATTTCCTTCCTGCCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp TGTCAAACAAGGAACATGGCACTGCTTAAACACCAAACTGGGAAAGGCTGCAAACTCCATCGTCAGAAGTaGAGCACTATCCCTAGGTTC +
Preference number: 4 (lower is better)
Translates to: CQTRNMALLKHQTGKGCKLHRQK*STIPRF
Trigger: GAACCTAGGGATAGTGCTCCACTTCTGACGATGGAG...TTTGCAGCCTTTCCCAGTTTGGTGTTTAAGCAGTGCCATGTTCCTTGTTTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp CTTTTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTAGCATTACTGGCTTAGTGCAGTaGTGCTCACAGTTTCAGGAA +
Preference number: 4 (lower is better)
Translates to: LLIDNTRPWKRAHSACSITGLVQ*CSQFQE
Trigger: TTCCTGAAACTGTGAGCACCACTGCACTAAGCCAGT...AATGCTACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp GCAAACCTTTTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTGTCAGGGTTCTCTTTTaGCTAAAGAGTTGGGGGTAT +
Preference number: 4 (lower is better)
Translates to: ANLLIDNTRPWKRAHSACVRVLF*LKSWGY
Trigger: ATACCCCCAACTCTTTAGCCAAAAGAGAACCCTGAC...ACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp ATGCCAACTGTCCAGCACAGCACCTTTAAAAGCAGAGGCACAAACGTAGGATTGGTCAGGGTTCTCTTTTaGCTAAAGAGTTGGGGGTAT +
Preference number: 4 (lower is better)
Translates to: MPTVQHSTFKSRGTNVGLVRVLF*LKSWGY
Trigger: ATACCCCCAACTCTTTAGCCAAAAGAGAACCCTGAC...CAATCCTACGTTTGTGCCTCTGCTTTTAAAGGTGCTGTGCTGGACAGTTGGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp GCATATTCTGAGCATAGGCACAGTGGCAAAGAACAGTGTAACAGCCGCTGGTCAATCAACTGTGGCAGGTaGCATTCCTTTTTCAGTATG +
Preference number: 4 (lower is better)
Translates to: AYSEHRHSGKEQCNSRWSINCGR*HSFFSM
Trigger: CATACTGAAAAAGGAATGCCACCTGCCACAGTTGAT...TGACCAGCGGCTGTTACACTGTTCTTTGCCACTGTGCCTATGCTCAGAATATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp TTTGGCAGGAAGGAAATCATTGCAAACCTTTTGATTGACAATACTCGCCCCTGGCTGCAGAGAAGCTCCTaGGAGAATGGAACAGGAACA +
Preference number: 4 (lower is better)
Translates to: FGRKEIIANLLIDNTRPWLQRSS*ENGTGT
Trigger: TGTTCCTGTTCCATTCTCCCAGGAGCTTCTCTGCAG...CCAGGGGCGAGTATTGTCAATCAAAAGGTTTGCAATGATTTCCTTCCTGCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp GACTGCAGTTTAAAATCCATGCTACACCTAAGTGGTGCTGTGGTCCTTTTGCCTAAGGTACTTAGCTGGTaGCTTCTGAAGCCCACCATT +
Preference number: 4 (lower is better)
Translates to: DCSLKSMLHLSGAVVLLPKVLSW*LLKPTI
Trigger: AATGGTGGGCTTCAGAAGCCACCAGCTAAGTACCTT...AGGCAAAAGGACCACAGCACCACTTAGGTGTAGCATGGATTTTAAACTGCAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443503.6
CDS-3UTR CCA 90 bp GATACTGACTGCAGTTTAAAATCCATGCTACACCTAAGTGGTGCTGTGGTCCTTAAGAAGGTACTTAGCTaGTGGCTTCTGAAGCCCACC +
Preference number: 4 (lower is better)
Translates to: DTDCSLKSMLHLSGAVVLKKVLS*WLLKPT
Trigger: GGTGGGCTTCAGAAGCCACCAGCTAAGTACCTTCTT...AAGGACCACAGCACCACTTAGGTGTAGCATGGATTTTAAACTGCAGTCAGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443503.6
CDS-3UTR TCA 90 bp GGCCACAGGTTCTCAAGAGAGAACAGTCAGCTTATTTATCAAACAGGATCTGATTCTGCTTCTTTAAGCTaGCGTTGCACTGGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: GHRFSRENSQLIYQTGSDSASLS*RCTGRL
Trigger: AAGCCTCCCAGTGCAACGTCAGCTTAAAGAAGCAGA...ATCAGATCCTGTTTGATAAATAAGCTGACTGTTCTCTCTTGAGAACCTGTGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp CTCAAGTCTGCCAAGTGTCTTCACTCCATCGTCAGAAGTGGAGCACTATCCCTAAATGAGTGGAGACAATaGCATAGTCATGAAATCCTC +
Preference number: 4 (lower is better)
Translates to: LKSAKCLHSIVRSGALSLNEWRQ*HSHEIL
Trigger: GAGGATTTCATGACTATGTCATTGTCTCCACTCATT...TAGGGATAGTGCTCCACTTCTGACGATGGAGTGAAGACACTTGGCAGACTTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp GCATATTCTGAGCATAGGCACAGTGGCAAAGAACAGTGTAACAGCCGCTGGTCATGTTTCCTAAAGTGTTaGGCCACACAATTGCAGATA +
Preference number: 4 (lower is better)
Translates to: AYSEHRHSGKEQCNSRWSCFLKC*ATQLQI
Trigger: TATCTGCAATTGTGTGGCTCAACACTTTAGGAAACA...TGACCAGCGGCTGTTACACTGTTCTTTGCCACTGTGCCTATGCTCAGAATATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp AGAATTTTGGAGTGTGGTCAAATAAGGTGCACAGATTCCAGAACCCTCAGAGGGGTGGATATCAACACATaGCAGACACTTGACTGCAAC +
Preference number: 4 (lower is better)
Translates to: RILECGQIRCTDSRTLRGVDINT*QTLDCN
Trigger: GTTGCAGTCAAGTGTCTGTCATGTGTTGATATCCAC...CCCTCTGAGGGTTCTGGAATCTGTGCACCTTATTTGACCACACTCCAAAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp TTAAAATCCATGCTACACCTAAGTGGTGCTGTGGTCCTTTTGCCTTTGTACCCTTCAGGAACTACTAGGTaGAGTGTCTGGCTCAAGTCT +
Preference number: 4 (lower is better)
Translates to: LKSMLHLSGAVVLLPLYPSGTTR*SVWLKS
Trigger: AGACTTGAGCCAGACACTTCACCTAGTAGTTCCTGA...AGGGTACAAAGGCAAAAGGACCACAGCACCACTTAGGTGTAGCATGGATTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp CTTTTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTAGCATTTGCAAACCTTTTGATTaGCAATACTCGCCCCTGGAA +
Preference number: 4 (lower is better)
Translates to: LLIDNTRPWKRAHSACSICKPFD*QYSPLE
Trigger: TTCCAGGGGCGAGTATTGTCAATCAAAAGGTTTGCA...AATGCTACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000443503.6
ENST00000447745.5
CDS-3UTR GCA 90 bp GGCATCTTTATTCATAGCAGCCTGCGGATCCGAAAACTCACACCCTTCCCCCTTGGCTTAAACGAACTGTaGACCAATGTTTCATCTAAA +
Preference number: 4 (lower is better)
Translates to: GIFIHSSLRIRKLTPFPLGLNEL*TNVSSK
Trigger: TTTAGATGAAACATTGGTGCACAGTTCGTTTAAGCC...AAGGGGGAAGGGTGTGAGTTTTCGGATCCGCAGGCTGCTATGAATAAAGATGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416688.5
CDS-3UTR GCA 90 bp AGACAGGCTTCCCCAACCCTTGGCTCAGAAATAGGCTGTGCTTCAAAGGAGAAGGGCTTAAACGAACTGTaGACCAATGTTTCATCTAAA +
Preference number: 4 (lower is better)
Translates to: RQASPTLGSEIGCASKEKGLNEL*TNVSSK
Trigger: TTTAGATGAAACATTGGTGCACAGTTCGTTTAAGCC...CTTCTCCTTTGAAGCACAGCCTATTTCTGAGCCAAGGGTTGGGGAAGCCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp TCTGATACTGACTGCAGTTTAAAATCCATGCTACACCTAAGTGGTGCTGTGGTCGCTACACCTAAGTGGTaGTGTGGTCCTTTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: SDTDCSLKSMLHLSGAVVATPKW*CGPFAF
Trigger: AAAGGCAAAAGGACCACAGCACCACTTAGGTGTAGC...GACCACAGCACCACTTAGGTGTAGCATGGATTTTAAACTGCAGTCAGTATCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR GCA 90 bp AAAATCCATGCTACACCTAAGTGGTGCTGTGGTCCTTTTGCCTTTGTACCCTTCGCAGCCAGCCAATTTTaGACAGTTAACTGCAAGTAC +
Preference number: 4 (lower is better)
Translates to: KIHATPKWCCGPFAFVPFAASQF*TVNCKY
Trigger: GTACTTGCAGTTAACTGTGCAAAATTGGCTGGCTGC...GAAGGGTACAAAGGCAAAAGGACCACAGCACCACTTAGGTGTAGCATGGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp GACTACGGCATCTTTATTCATAGCAGCCTGCGGATCCGAAAACTCACACCCTTCCTCTGGAGAAAACGATaGAGGAATGATAAGATCAGT +
Preference number: 4 (lower is better)
Translates to: DYGIFIHSSLRIRKLTPFLWRKR*RNDKIS
Trigger: ACTGATCTTATCATTCCTGCATCGTTTTCTCCAGAG...GAAGGGTGTGAGTTTTCGGATCCGCAGGCTGCTATGAATAAAGATGCCGTAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416688.5
CDS-3UTR GCA 90 bp TTAAAATCCATGCTACACCTAAGTGGTGCTGTGGTCCTTTTGCCTTTGTACCCTTGTGTATCCAGCTATTaGAGAGTCTGTGCAGCATGC +
Preference number: 4 (lower is better)
Translates to: LKSMLHLSGAVVLLPLYPCVSSY*RVCAAC
Trigger: GCATGCTGCACAGACTCTGCAATAGCTGGATACACA...AGGGTACAAAGGCAAAAGGACCACAGCACCACTTAGGTGTAGCATGGATTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436654.1
CDS-3UTR CCA 90 bp GCAAACCTTTTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTAAGAAGGTACTTAGCTaGTGGACTTGGTATGGGAAT +
Preference number: 4 (lower is better)
Translates to: ANLLIDNTRPWKRAHSACKKVLS*WTWYGN
Trigger: ATTCCCATACCAAGTCCACCAGCTAAGTACCTTCTT...ACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273179.10
CDS-3UTR CCA 90 bp GACACCTCTGTTTCTGACCCTGTCCGAGTTTGTAGCTTAGCAGTGAGCATATTCTTGGGAGGATGTAATTaGCAGCTGGCTTCATTACTT +
Preference number: 4 (lower is better)
Translates to: DTSVSDPVRVCSLAVSIFLGGCN*QLASLL
Trigger: AAGTAATGAAGCCAGCTGCCAATTACATCCTCCCAA...GAATATGCTCACTGCTAAGCTACAAACTCGGACAGGGTCAGAAACAGAGGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp TTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTAGCATTTCCTTGGGAGGATGTAATTaGCAGCTGGCTTCATTACTT +
Preference number: 4 (lower is better)
Translates to: LIDNTRPWKRAHSACSISLGGCN*QLASLL
Trigger: AAGTAATGAAGCCAGCTGCCAATTACATCCTCCCAA...GGAAATGCTACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp TTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTAGCATTTCCTGGCATGTGGATTACTaGTTTGGAACACTCAGAATG +
Preference number: 4 (lower is better)
Translates to: LIDNTRPWKRAHSACSISWHVDY*FGTLRM
Trigger: CATTCTGAGTGTTCCAAACCAGTAATCCACATGCCA...GGAAATGCTACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp ATCTTTATTCATAGCAGCCTGCGGATCCGAAAACTCACACCCTTCCCCCTTTTTAGAGTCCACCATAAGTaGGTGACTTGTGGCATTTTC +
Preference number: 4 (lower is better)
Translates to: IFIHSSLRIRKLTPFPLFRVHHK*VTCGIF
Trigger: GAAAATGCCACAAGTCACCCACTTATGGTGGACTCT...AAAAAGGGGGAAGGGTGTGAGTTTTCGGATCCGCAGGCTGCTATGAATAAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000416688.5
CDS-3UTR CCA 90 bp AACCTTTTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTAGCTTGGGAGGATGTAATTaGCAGCTGGCTTCATTACTA +
Preference number: 4 (lower is better)
Translates to: NLLIDNTRPWKRAHSACSLGGCN*QLASLL
Trigger: TAGTAATGAAGCCAGCTGCCAATTACATCCTCCCAA...GCTACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447745.5
3UTR CAA 72 bp GAATATTCACACAGCAGTCCACAGACCAAAGTGCTGTaGGGAGGATGTAATTGGCAGCTGGCTTCATTACTT +
Preference number: 4 (lower is better)
Translates to: EYSHSSPQTKVL*GGCNWQLASLL
Trigger: AAGTAATGAAGCCAGCTGCCAATTACATCCTCCCAACAGCACTTTGGTCTGTGGACTGCTGTGTGAATATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp AGGAAGGAAATCATTGCAAACCTTTTGATTGACAATACTCGCCCCTGGAAACGTGGGAATTGTCAACAATaGTCACTTTGCTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: RKEIIANLLIDNTRPWKRGNCQQ*SLCSAP
Trigger: GGGAGCTGAGCAAAGTGATCATTGTTGACAATTCCC...ACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTTTGCAATGATTTCCTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000443503.6
ENST00000447745.5
CDS-3UTR TCA 90 bp CTCAAGTCTGCCAAGTGTCTTCACTCCATCGTCAGAAGTGGAGCACTATCCCTAAAAGATATTTTACTTTaGCCCCCGATTTCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: LKSAKCLHSIVRSGALSLKDILL*PPISSL
Trigger: AAGACTGGAAATCGGGGGTCAAAGTAAAATATCTTT...TAGGGATAGTGCTCCACTTCTGACGATGGAGTGAAGACACTTGGCAGACTTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp ATGGGATGGGACACCTCTGTTTCTGACCCTGTCCGAGTTTGTAGCTTAGCAGTGGCAAACCCAGTAAAATaGATGTCCCTTTATGAAATT +
Preference number: 4 (lower is better)
Translates to: MGWDTSVSDPVRVCSLAVANPVK*MSLYEI
Trigger: AATTTCATAAAGGGACATGCATTTTACTGGGTTTGC...CACTGCTAAGCTACAAACTCGGACAGGGTCAGAAACAGAGGTGTCCCATCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp GACTGCAGTTTAAAATCCATGCTACACCTAAGTGGTGCTGTGGTCCTTTTGCCTGTTGAGCCACACAATTaGAGATACATTCCAAACTGG +
Preference number: 4 (lower is better)
Translates to: DCSLKSMLHLSGAVVLLPVEPHN*RYIPNW
Trigger: CCAGTTTGGAATGTATCTGCAATTGTGTGGCTCAAC...AGGCAAAAGGACCACAGCACCACTTAGGTGTAGCATGGATTTTAAACTGCAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp AGGAAGGAAATCATTGCAAACCTTTTGATTGACAATACTCGCCCCTGGAAACGTGCTACACCTAAGTGGTaGTGTGGTCCTTTTGCCTTT +
Preference number: 4 (lower is better)
Translates to: RKEIIANLLIDNTRPWKRATPKW*CGPFAF
Trigger: AAAGGCAAAAGGACCACAGCACCACTTAGGTGTAGC...ACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTTTGCAATGATTTCCTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp AAAATCCATGCTACACCTAAGTGGTGCTGTGGTCCTTTTGCCTTTGTACCCTTCCTCAGAAATAGGCTGTaGTTCAAAGGAGAAGACCAA +
Preference number: 4 (lower is better)
Translates to: KIHATPKWCCGPFAFVPFLRNRL*FKGEDQ
Trigger: TTGGTCTTCTCCTTTGAAGCACAGCCTATTTCTGAG...GAAGGGTACAAAGGCAAAAGGACCACAGCACCACTTAGGTGTAGCATGGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR GCA 90 bp TGTCAAACAAGGAACATGGCACTGCTTAAACACCAAACTGGGAAAGGCTGCAAACAAGGAACATGGCACTaGTTAAACACCAAACTGGGA +
Preference number: 4 (lower is better)
Translates to: CQTRNMALLKHQTGKGCKQGTWH*LNTKLG
Trigger: TCCCAGTTTGGTGTTTAAGCAGTGCCATGTTCCTTG...TTTGCAGCCTTTCCCAGTTTGGTGTTTAAGCAGTGCCATGTTCCTTGTTTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR GCA 90 bp TTTGGCAGGAAGGAAATCATTGCAAACCTTTTGATTGACAATACTCGCCCCTGGGTCCACAGACCAAAGTaGTGTTGGGAGGATGTAATT +
Preference number: 4 (lower is better)
Translates to: FGRKEIIANLLIDNTRPWVHRPK*CWEDVI
Trigger: AATTACATCCTCCCAACAGCACTTTGGTCTGTGGAC...CCAGGGGCGAGTATTGTCAATCAAAAGGTTTGCAATGATTTCCTTCCTGCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000443503.6
ENST00000447745.5
CDS-3UTR GCA 90 bp GACACCTCTGTTTCTGACCCTGTCCGAGTTTGTAGCTTAGCAGTGAGCATATTCTTTTGCACAGTTAACTaGAAGTACGTCAAGCCATTC +
Preference number: 4 (lower is better)
Translates to: DTSVSDPVRVCSLAVSIFFCTVN*KYVKPF
Trigger: GAATGGCTTGACGTACTTGCAGTTAACTGTGCAAAA...GAATATGCTCACTGCTAAGCTACAAACTCGGACAGGGTCAGAAACAGAGGTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp TCCCCAACCCTTGGCTCAGAAATAGGCTGTGCTTCAAAGGAGAAGACCAAGAGAAGATACATTCCAAACTaGGTCAAAAATGAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: SPTLGSEIGCASKEKTKRRYIPN*VKNEWR
Trigger: TCTCCACTCATTTTTGACCCAGTTTGGAATGTATCT...TCTCTTGGTCTTCTCCTTTGAAGCACAGCCTATTTCTGAGCCAAGGGTTGGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp CACAGGTTCTCAAGAGAGAACAGTCAGCTTATTTATCAAACAGGATCTGATACTGTCAATTCCATTTGGTaGCAGCGCGGTAGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: HRFSRENSQLIYQTGSDTVNSIW*QRGSSK
Trigger: CTTGCTGCTACCGCGCTGCCACCAAATGGAATTGAC...AGTATCAGATCCTGTTTGATAAATAAGCTGACTGTTCTCTCTTGAGAACCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CCA 90 bp AGAATTTTGGAGTGTGGTCAAATAAGGTGCACAGATTCCAGAACCCTCAGAGGGATCAACTGTGGCAGGTaGCATTCCTTTTTCAGTATG +
Preference number: 4 (lower is better)
Translates to: RILECGQIRCTDSRTLRGINCGR*HSFFSM
Trigger: CATACTGAAAAAGGAATGCCACCTGCCACAGTTGAT...CCCTCTGAGGGTTCTGGAATCTGTGCACCTTATTTGACCACACTCCAAAATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp GACTACGGCATCTTTATTCATAGCAGCCTGCGGATCCGAAAACTCACACCCTTCTTGCTAAAGATTCTCTaGAGAAAACGATGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: DYGIFIHSSLRIRKLTPFLLKIL*RKRCRN
Trigger: ATTCCTGCATCGTTTTCTCCAGAGAATCTTTAGCAA...GAAGGGTGTGAGTTTTCGGATCCGCAGGCTGCTATGAATAAAGATGCCGTAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416688.5
3UTR CAA 72 bp ACAAAGATATTTTACTTTGACCCCCGATTTCCAGTCTaGTTAATGCCAGTCACTCCCACCAGAATGCTGGCT +
Preference number: 4 (lower is better)
Translates to: TKIFYFDPRFPV*LMPVTPTRMLA
Trigger: AGCCAGCATTCTGGTGGGAGTGACTGGCATTAACAAGACTGGAAATCGGGGGTCAAAGTAAAATATCTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR CAA 72 bp CACAGCACCTTTAAAAGCAGAGGCACAAACGTAGGATaGTTTGACCATAGGGCTGTGTGGTTCTGGATTTTT +
Preference number: 4 (lower is better)
Translates to: HSTFKSRGTNVG*FDHRAVWFWIF
Trigger: AAAAATCCAGAACCACACAGCCCTATGGTCAAACAATCCTACGTTTGTGCCTCTGCTTTTAAAGGTGCTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp AAAATCCATGCTACACCTAAGTGGTGCTGTGGTCCTTTTGCCTTTGTACCCTTCAATGAGTGGAGACAATaGCATAGTCATGAAATCCTC +
Preference number: 4 (lower is better)
Translates to: KIHATPKWCCGPFAFVPFNEWRQ*HSHEIL
Trigger: GAGGATTTCATGACTATGTCATTGTCTCCACTCATT...GAAGGGTACAAAGGCAAAAGGACCACAGCACCACTTAGGTGTAGCATGGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp TGTCAAACAAGGAACATGGCACTGCTTAAACACCAAACTGGGAAAGGCTGCAAATACTTACTTCCCTTCTaGATATTCACACAGCAGTCC +
Preference number: 4 (lower is better)
Translates to: CQTRNMALLKHQTGKGCKYLLPF*IFTQQS
Trigger: GGACTGCTGTGTGAATATTCAGAAGGGAAGTAAGTA...TTTGCAGCCTTTCCCAGTTTGGTGTTTAAGCAGTGCCATGTTCCTTGTTTGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp GCAAACCTTTTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTGGCTTAAACGAACTGTaGACCAATGTTTCATCTAAA +
Preference number: 4 (lower is better)
Translates to: ANLLIDNTRPWKRAHSACGLNEL*TNVSSK
Trigger: TTTAGATGAAACATTGGTGCACAGTTCGTTTAAGCC...ACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000443503.6
ENST00000447745.5
CDS-3UTR GCA 90 bp AACCTTTTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTAGCAGGGTTTCTTGTAACTaGTCTACCCAAACAATAACA +
Preference number: 4 (lower is better)
Translates to: NLLIDNTRPWKRAHSACSRVSCN*STQTIT
Trigger: TGTTATTGTTTGGGTAGAGCAGTTACAAGAAACCCT...GCTACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp GACTGCAGTTTAAAATCCATGCTACACCTAAGTGGTGCTGTGGTCCTTTTGCCTCACCAAAAGTTCAAATaGTGCAACCATGACAAGTCA +
Preference number: 4 (lower is better)
Translates to: DCSLKSMLHLSGAVVLLPHQKFK*CNHDKS
Trigger: TGACTTGTCATGGTTGCAGCATTTGAACTTTTGGTG...AGGCAAAAGGACCACAGCACCACTTAGGTGTAGCATGGATTTTAAACTGCAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp CTTTTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTAGCATTGTCAAACAAGGAACATaGCACTGCTTAAACACCAAA +
Preference number: 4 (lower is better)
Translates to: LLIDNTRPWKRAHSACSIVKQGT*HCLNTK
Trigger: TTTGGTGTTTAAGCAGTGCCATGTTCCTTGTTTGAC...AATGCTACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp TTTGGCAGGAAGGAAATCATTGCAAACCTTTTGATTGACAATACTCGCCCCTGGAGAGGACTAAGGCAATaGTGCCAATATGAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: FGRKEIIANLLIDNTRPWRGLRQ*CQYERV
Trigger: AACCCTTTCATATTGGCACCATTGCCTTAGTCCTCT...CCAGGGGCGAGTATTGTCAATCAAAAGGTTTGCAATGATTTCCTTCCTGCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp TCTGATACTGACTGCAGTTTAAAATCCATGCTACACCTAAGTGGTGCTGTGGTCAACATGGGAAGTATATaGCACAGAGAAGTGGCTAAC +
Preference number: 4 (lower is better)
Translates to: SDTDCSLKSMLHLSGAVVNMGSI*HREVAN
Trigger: GTTAGCCACTTCTCTGTGCCATATACTTCCCATGTT...GACCACAGCACCACTTAGGTGTAGCATGGATTTTAAACTGCAGTCAGTATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp CACAGGTTCTCAAGAGAGAACAGTCAGCTTATTTATCAAACAGGATCTGATACTCTGCAGAGAAGCTCCTaGGAGAATGGAACAGGAACA +
Preference number: 4 (lower is better)
Translates to: HRFSRENSQLIYQTGSDTLQRSS*ENGTGT
Trigger: TGTTCCTGTTCCATTCTCCCAGGAGCTTCTCTGCAG...AGTATCAGATCCTGTTTGATAAATAAGCTGACTGTTCTCTCTTGAGAACCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp CACAGGTTCTCAAGAGAGAACAGTCAGCTTATTTATCAAACAGGATCTGATACTAGGATGGAAGATGTATaGGGCAGGGGAATTGTCAAC +
Preference number: 4 (lower is better)
Translates to: HRFSRENSQLIYQTGSDTRMEDV*GRGIVN
Trigger: GTTGACAATTCCCCTGCCTCATACATCTTCCATCCT...AGTATCAGATCCTGTTTGATAAATAAGCTGACTGTTCTCTCTTGAGAACCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR TCA 90 bp TCTGATACTGACTGCAGTTTAAAATCCATGCTACACCTAAGTGGTGCTGTGGTCGAACAGGAACAGACATaGTCAAAGTTACAGTACAGT +
Preference number: 4 (lower is better)
Translates to: SDTDCSLKSMLHLSGAVVEQEQT*SKLQYS
Trigger: ACTGTACTGTAACTTTGATCATGTCTGTTCCTGTTC...GACCACAGCACCACTTAGGTGTAGCATGGATTTTAAACTGCAGTCAGTATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp AGGAAGGAAATCATTGCAAACCTTTTGATTGACAATACTCGCCCCTGGAAACGTTCATTGCAAACCTTTTaGTTGACAATACTCGCCCCT +
Preference number: 4 (lower is better)
Translates to: RKEIIANLLIDNTRPWKRSLQTF*LTILAP
Trigger: AGGGGCGAGTATTGTCAATCAAAAGGTTTGCAATGA...ACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTTTGCAATGATTTCCTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000443503.6
ENST00000447745.5
CDS-3UTR GCA 90 bp AGAATTTTGGAGTGTGGTCAAATAAGGTGCACAGATTCCAGAACCCTCAGAGGGGGATCTGATACTGACTaGAGTTTAAAATCCATGCTA +
Preference number: 4 (lower is better)
Translates to: RILECGQIRCTDSRTLRGGSDTD*SLKSML
Trigger: TAGCATGGATTTTAAACTGCAGTCAGTATCAGATCC...CCCTCTGAGGGTTCTGGAATCTGTGCACCTTATTTGACCACACTCCAAAATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp GACTGCAGTTTAAAATCCATGCTACACCTAAGTGGTGCTGTGGTCCTTTTGCCTGGATCTGATACTGACTaGAGTTTAAAATCCATGCTA +
Preference number: 4 (lower is better)
Translates to: DCSLKSMLHLSGAVVLLPGSDTD*SLKSML
Trigger: TAGCATGGATTTTAAACTGCAGTCAGTATCAGATCC...AGGCAAAAGGACCACAGCACCACTTAGGTGTAGCATGGATTTTAAACTGCAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR GCA 90 bp TTTGGCAGGAAGGAAATCATTGCAAACCTTTTGATTGACAATACTCGCCCCTGGACATCTCATCAAAATTaGACCACGTCAAAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: FGRKEIIANLLIDNTRPWTSHQN*TTSKEL
Trigger: AAGCTCCTTTGACGTGGTGCAATTTTGATGAGATGT...CCAGGGGCGAGTATTGTCAATCAAAAGGTTTGCAATGATTTCCTTCCTGCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp GATACTGACTGCAGTTTAAAATCCATGCTACACCTAAGTGGTGCTGTGGTCCTTTTTTGCACAGTTAACTaGAAGTACGTCAAGCCATTC +
Preference number: 4 (lower is better)
Translates to: DTDCSLKSMLHLSGAVVLFCTVN*KYVKPF
Trigger: GAATGGCTTGACGTACTTGCAGTTAACTGTGCAAAA...AAGGACCACAGCACCACTTAGGTGTAGCATGGATTTTAAACTGCAGTCAGTATC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp TCTGATACTGACTGCAGTTTAAAATCCATGCTACACCTAAGTGGTGCTGTGGTCGTCAAACAAGGAACATaGCACTGCTTAAACACCAAA +
Preference number: 4 (lower is better)
Translates to: SDTDCSLKSMLHLSGAVVVKQGT*HCLNTK
Trigger: TTTGGTGTTTAAGCAGTGCCATGTTCCTTGTTTGAC...GACCACAGCACCACTTAGGTGTAGCATGGATTTTAAACTGCAGTCAGTATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CCA 90 bp CTCTCATTAGGGCCTAATTCTGTGTGGATATCAACACATGACAGACACTTGACTAACATGGGAAGTATATaGCACAGAGAAGTGGCTAAC +
Preference number: 4 (lower is better)
Translates to: LSLGPNSVWISTHDRHLTNMGSI*HREVAN
Trigger: GTTAGCCACTTCTCTGTGCCATATACTTCCCATGTT...AGTCAAGTGTCTGTCATGTGTTGATATCCACACAGAATTAGGCCCTAATGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp AGGAAGGAAATCATTGCAAACCTTTTGATTGACAATACTCGCCCCTGGAAACGTTTCAGCACATACACCTaGTGTATAGTTCCATCGATT +
Preference number: 4 (lower is better)
Translates to: RKEIIANLLIDNTRPWKRFSTYT*CIVPSI
Trigger: AATCGATGGAACTATACATCAGGTGTATGTGCTGAA...ACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTTTGCAATGATTTCCTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000443503.6
ENST00000447745.5
CDS-3UTR GCA 90 bp AGGAAGGAAATCATTGCAAACCTTTTGATTGACAATACTCGCCCCTGGAAACGTACATCTCATCAAAATTaGACCACGTCAAAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: RKEIIANLLIDNTRPWKRTSHQN*TTSKEL
Trigger: AAGCTCCTTTGACGTGGTGCAATTTTGATGAGATGT...ACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTTTGCAATGATTTCCTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp TTTGGCAGGAAGGAAATCATTGCAAACCTTTTGATTGACAATACTCGCCCCTGGAGATACATTCCAAACTaGGTCAAAAATGAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: FGRKEIIANLLIDNTRPWRYIPN*VKNEWR
Trigger: TCTCCACTCATTTTTGACCCAGTTTGGAATGTATCT...CCAGGGGCGAGTATTGTCAATCAAAAGGTTTGCAATGATTTCCTTCCTGCCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp TGTCAAACAAGGAACATGGCACTGCTTAAACACCAAACTGGGAAAGGCTGCAAAGATGTAATTGGCAGCTaGCTTCATTACTTTGTGAAT +
Preference number: 4 (lower is better)
Translates to: CQTRNMALLKHQTGKGCKDVIGS*LHYFVN
Trigger: ATTCACAAAGTAATGAAGCCAGCTGCCAATTACATC...TTTGCAGCCTTTCCCAGTTTGGTGTTTAAGCAGTGCCATGTTCCTTGTTTGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp CTCTCATTAGGGCCTAATTCTGTGTGGATATCAACACATGACAGACACTTGACTGGTATTTTGGTAACATaGGAAGTATATGGCACAGAG +
Preference number: 4 (lower is better)
Translates to: LSLGPNSVWISTHDRHLTGILVT*EVYGTE
Trigger: CTCTGTGCCATATACTTCCCATGTTACCAAAATACC...AGTCAAGTGTCTGTCATGTGTTGATATCCACACAGAATTAGGCCCTAATGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR TCA 90 bp CTCTCATTAGGGCCTAATTCTGTGTGGATATCAACACATGACAGACACTTGACTAAAGATATTTTACTTTaGCCCCCGATTTCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: LSLGPNSVWISTHDRHLTKDILL*PPISSL
Trigger: AAGACTGGAAATCGGGGGTCAAAGTAAAATATCTTT...AGTCAAGTGTCTGTCATGTGTTGATATCCACACAGAATTAGGCCCTAATGAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp CTCTCATTAGGGCCTAATTCTGTGTGGATATCAACACATGACAGACACTTGACTGGCTTAAACGAACTGTaGACCAATGTTTCATCTAAA +
Preference number: 4 (lower is better)
Translates to: LSLGPNSVWISTHDRHLTGLNEL*TNVSSK
Trigger: TTTAGATGAAACATTGGTGCACAGTTCGTTTAAGCC...AGTCAAGTGTCTGTCATGTGTTGATATCCACACAGAATTAGGCCCTAATGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR GCA 90 bp CACAGGTTCTCAAGAGAGAACAGTCAGCTTATTTATCAAACAGGATCTGATACTGGACTAAGGCAATGGTaGCAATATGAAAGGGTTCTT +
Preference number: 4 (lower is better)
Translates to: HRFSRENSQLIYQTGSDTGLRQW*QYERVL
Trigger: AAGAACCCTTTCATATTGGCACCATTGCCTTAGTCC...AGTATCAGATCCTGTTTGATAAATAAGCTGACTGTTCTCTCTTGAGAACCTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
3UTR CAA 72 bp TTTATTTTTGGCAGGAAGGAAATCATTGCAAACCTTTaGATTGACAATACTCGCCCCTGGAAACGTGCACAT +
Preference number: 4 (lower is better)
Translates to: FIFGRKEIIANL*IDNTRPWKRAH
Trigger: ATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTTTGCAATGATTTCCTTCCTGCCAAAAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000443503.6
ENST00000447745.5
CDS-3UTR GCA 90 bp CTCTCATTAGGGCCTAATTCTGTGTGGATATCAACACATGACAGACACTTGACTGCAAACCCAGTAAAATaGATGTCCCTTTATGAAATT +
Preference number: 4 (lower is better)
Translates to: LSLGPNSVWISTHDRHLTANPVK*MSLYEI
Trigger: AATTTCATAAAGGGACATGCATTTTACTGGGTTTGC...AGTCAAGTGTCTGTCATGTGTTGATATCCACACAGAATTAGGCCCTAATGAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CCA 90 bp CACAGGTTCTCAAGAGAGAACAGTCAGCTTATTTATCAAACAGGATCTGATACTGTCAAACAAGGAACATaGCACTGCTTAAACACCAAA +
Preference number: 4 (lower is better)
Translates to: HRFSRENSQLIYQTGSDTVKQGT*HCLNTK
Trigger: TTTGGTGTTTAAGCAGTGCCATGTTCCTTGTTTGAC...AGTATCAGATCCTGTTTGATAAATAAGCTGACTGTTCTCTCTTGAGAACCTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR GCA 90 bp CACAGGTTCTCAAGAGAGAACAGTCAGCTTATTTATCAAACAGGATCTGATACTAGGGTTTCTTGTAACTaGTCTACCCAAACAATAACA +
Preference number: 4 (lower is better)
Translates to: HRFSRENSQLIYQTGSDTRVSCN*STQTIT
Trigger: TGTTATTGTTTGGGTAGAGCAGTTACAAGAAACCCT...AGTATCAGATCCTGTTTGATAAATAAGCTGACTGTTCTCTCTTGAGAACCTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS GCA 90 bp AGGCGGGAGGCAGGCAGAGGCCAGGGCTACCTATTGCAGAGTCTGTaGAGCATGCTGTACACGTCGTCCTCCCGGCTCAGGCCCTCAAAG +
Preference number: 5 (lower is better)
Translates to: RREAGRGQGYLLQSL*SMLYTSSSRLRPSK
Trigger: CTTTGAGGGCCTGAGCCGGGAGGACGACGTGTACAGCATGCTGCACAGACTCTGCAATAGGTAGCCCTGGCCTCTGCCTGCCTCCCGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000310189.3
ENST00000443503.6
CDS TCA 90 bp CCCAGCCCCTGGAGGCTTCTGGTCTGTAGGTCCAGGTTGTGGCTGTaGTGGTGGCAATGGCTGCTAACCCAAGCCGCTGCTGCAGAAGCA +
Preference number: 5 (lower is better)
Translates to: PSPWRLLVCRSRLWL*WWQWLLTQAAAAEA
Trigger: TGCTTCTGCAGCAGCGGCTTGGGTTAGCAGCCATTGCCACCATCACAGCCACAACCTGGACCTACAGACCAGAAGCCTCCAGGGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310189.3
CDS-3UTR CAA 90 bp CAGCATCTCCACTACCCGGGGTGGGGGAGGGTGTGTCAGTCTGCAGAGAAGCTCTGGAGGGGAGGACAGTaGAAAGGAAGTCTGATAGAG +
Preference number: 5 (lower is better)
Translates to: QHLHYPGWGRVCQSAEKLWRGGQ*KGSLIE
Trigger: CTCTATCAGACTTCCTTTCAACTGTCCTCCCCTCCA...GAGCTTCTCTGCAGACTGACACACCCTCCCCCACCCCGGGTAGTGGAGATGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CAA 90 bp TGGACTTGGGCCACATCAGCTTGGTGGCTGGTTGAGGCCACAGGTTCTCAAGAGCAGCTTGGTGGCTGGTaGAGGCCACAGGTTCTCAAG +
Preference number: 5 (lower is better)
Translates to: WTWATSAWWLVEATGSQEQLGGW*RPQVLK
Trigger: CTTGAGAACCTGTGGCCTCAACCAGCCACCAAGCTG...CTCTTGAGAACCTGTGGCCTCAACCAGCCACCAAGCTGATGTGGCCCAAGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS GCA 90 bp CAGCAGACACTCTCTCCCCGTCTAGTGACAATCAGTCTTCAGCTCTaGTCTAGTAGGAGAGTGCAGACAGCCCCTGCACACAGGTGCACC +
Preference number: 5 (lower is better)
Translates to: QQTLSPRLVTISLQL*SSRRVQTAPAHRCT
Trigger: GGTGCACCTGTGTGCAGGGGCTGTCTGCACTCTCCTACTAGAGCAGAGCTGAAGACTGATTGTCACTAGACGGGGAGAGAGTGTCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310189.3
CDS-3UTR CAA 90 bp CTCTCCAGACATTCTGTGTCCGTGGTGCAGGAGCTGGGCCCGTCCCTAACAGCTGGCACAAACGTAGGATaGTTTGACCATAGGGCTGTG +
Preference number: 5 (lower is better)
Translates to: LSRHSVSVVQELGPSLTAGTNVG*FDHRAV
Trigger: CACAGCCCTATGGTCAAACAATCCTACGTTTGTGCC...AGCTGTTAGGGACGGGCCCAGCTCCTGCACCACGGACACAGAATGTCTGGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CAA 90 bp TTTGGGGCAATGAGTCCCACATCTAGACAGGCTTCCCCAACCCTTGGCTCAGAAGGCCAGGGCTACCTATaGCAGAGTCTGTGCAGCATG +
Preference number: 5 (lower is better)
Translates to: FGAMSPTSRQASPTLGSEGQGYL*QSLCSM
Trigger: CATGCTGCACAGACTCTGCAATAGGTAGCCCTGGCC...TTCTGAGCCAAGGGTTGGGGAAGCCTGTCTAGATGTGGGACTCATTGCCCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CAA 90 bp GTGGTCCTTTTGCCTTTGTACCCTTCAGTGGCCAATGCCAGGAAGGGGTTACAGGGACAGGTGGTCTGCTaGGAGGGGAGGACAGTTGAA +
Preference number: 5 (lower is better)
Translates to: VVLLPLYPSVANARKGLQGQVVC*EGRTVE
Trigger: TTCAACTGTCCTCCCCTCCAAGCAGACCACCTGTCC...CTGTAACCCCTTCCTGGCATTGGCCACTGAAGGGTACAAAGGCAAAAGGACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CAA 90 bp GGATGGGACACCTCTGTTTCTGACCCTGTCCGAGTTTGTAGCTTAGCAGTGAGCGCAGCATGCCACAGGTaGTCAGAGCAGTCACACCTG +
Preference number: 5 (lower is better)
Translates to: GWDTSVSDPVRVCSLAVSAACHR*SEQSHL
Trigger: CAGGTGTGACTGCTCTGACAACCTGTGGCATGCTGC...GCTCACTGCTAAGCTACAAACTCGGACAGGGTCAGAAACAGAGGTGTCCCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CAA 90 bp GTGGTCCTTTTGCCTTTGTACCCTTCAGTGGCCAATGCCAGGAAGGGGTTACAGCAGCTTGGTGGCTGGTaGAGGCCACAGGTTCTCAAG +
Preference number: 5 (lower is better)
Translates to: VVLLPLYPSVANARKGLQQLGGW*RPQVLK
Trigger: CTTGAGAACCTGTGGCCTCAACCAGCCACCAAGCTG...CTGTAACCCCTTCCTGGCATTGGCCACTGAAGGGTACAAAGGCAAAAGGACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS GCA 90 bp TCACGGAAGCAGCAGAAGAAGGAGCTAAGGATGCTGCGGCTCCTCTaGTTCTTTAAGCTGACGTTGCACTGGGAGGCCAGGTCTTTCCTT +
Preference number: 5 (lower is better)
Translates to: SRKQQKKELRMLRLL*FFKLTLHWEARSFL
Trigger: AAGGAAAGACCTGGCCTCCCAGTGCAACGTCAGCTTAAAGAAGCAGAGGAGCCGCAGCATCCTTAGCTCCTTCTTCTGCTGCTTCCGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486978.5
CDS-3UTR CAA 90 bp AGACCAAGAGATGGACTTGGGCCACATCAGCTTGGTGGCTGGTTGAGGCCACAGTGGAGGGGAGGACAGTaGAAAGGAAGTCTGATAGAG +
Preference number: 5 (lower is better)
Translates to: RPRDGLGPHQLGGWLRPQWRGGQ*KGSLIE
Trigger: CTCTATCAGACTTCCTTTCAACTGTCCTCCCCTCCA...CTGTGGCCTCAACCAGCCACCAAGCTGATGTGGCCCAAGTCCATCTCTTGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CAA 90 bp GTGGTCCTTTTGCCTTTGTACCCTTCAGTGGCCAATGCCAGGAAGGGGTTACAGGACCAAGAGATGGACTaGGGCCACATCAGCTTGGTG +
Preference number: 5 (lower is better)
Translates to: VVLLPLYPSVANARKGLQDQEMD*GHISLV
Trigger: CACCAAGCTGATGTGGCCCAAGTCCATCTCTTGGTC...CTGTAACCCCTTCCTGGCATTGGCCACTGAAGGGTACAAAGGCAAAAGGACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CAA 90 bp TTTGGGGCAATGAGTCCCACATCTAGACAGGCTTCCCCAACCCTTGGCTCAGAAGACCAAGAGATGGACTaGGGCCACATCAGCTTGGTG +
Preference number: 5 (lower is better)
Translates to: FGAMSPTSRQASPTLGSEDQEMD*GHISLV
Trigger: CACCAAGCTGATGTGGCCCAAGTCCATCTCTTGGTC...TTCTGAGCCAAGGGTTGGGGAAGCCTGTCTAGATGTGGGACTCATTGCCCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS GCA 90 bp GTTGTGGCTGTGATGGTGGCAATGGCTGCTAACCCAAGCCGCTGCTaGAGAAGCAGCTGGAAACTCAAAGGCTCCAAATCCTCATTTCTC +
Preference number: 5 (lower is better)
Translates to: VVAVMVAMAANPSRC*RSSWKLKGSKSSFL
Trigger: GAGAAATGAGGATTTGGAGCCTTTGAGTTTCCAGCTGCTTCTGCAGCAGCGGCTTGGGTTAGCAGCCATTGCCACCATCACAGCCACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310189.3
CDS GCA 90 bp CAGGTTGTGGCTGTGATGGTGGCAATGGCTGCTAACCCAAGCCGCTaGTGCAGAAGCAGCTGGAAACTCAAAGGCTCCAAATCCTCATTT +
Preference number: 5 (lower is better)
Translates to: QVVAVMVAMAANPSR*CRSSWKLKGSKSSF
Trigger: AAATGAGGATTTGGAGCCTTTGAGTTTCCAGCTGCTTCTGCAGCAGCGGCTTGGGTTAGCAGCCATTGCCACCATCACAGCCACAACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310189.3
CDS GCA 90 bp TCAAGCACCGTCACCTCTGGAAGAAGGTACTTAGCTGGTGGCAGATaGCAGCAGACACTCTCTCCCCGTCTAGTGACAATCAGTCTTCAG +
Preference number: 5 (lower is better)
Translates to: SSTVTSGRRYLAGGR*QQTLSPRLVTISLQ
Trigger: CTGAAGACTGATTGTCACTAGACGGGGAGAGAGTGTCTGCTGGCATCTGCCACCAGCTAAGTACCTTCTTCCAGAGGTGACGGTGCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310189.3
CDS-3UTR CAA 90 bp CCTAAGTGGTGCTGTGGTCCTTTTGCCTTTGTACCCTTCAGTGGCCAATGCCAGGGTGCTGTGGTCCTTTaGCCTTTGTACCCTTCAGTG +
Preference number: 5 (lower is better)
Translates to: PKWCCGPFAFVPFSGQCQGAVVL*PLYPSV
Trigger: CACTGAAGGGTACAAAGGCAAAAGGACCACAGCACC...CTGGCATTGGCCACTGAAGGGTACAAAGGCAAAAGGACCACAGCACCACTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CAA 90 bp TTTGGGGCAATGAGTCCCACATCTAGACAGGCTTCCCCAACCCTTGGCTCAGAAGGTGCTGTGGTCCTTTaGCCTTTGTACCCTTCAGTG +
Preference number: 5 (lower is better)
Translates to: FGAMSPTSRQASPTLGSEGAVVL*PLYPSV
Trigger: CACTGAAGGGTACAAAGGCAAAAGGACCACAGCACC...TTCTGAGCCAAGGGTTGGGGAAGCCTGTCTAGATGTGGGACTCATTGCCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CAA 90 bp GGATGGGACACCTCTGTTTCTGACCCTGTCCGAGTTTGTAGCTTAGCAGTGAGCCCCCGATTTCCAGTCTaGTTAATGCCAGTCACTCCC +
Preference number: 5 (lower is better)
Translates to: GWDTSVSDPVRVCSLAVSPRFPV*LMPVTP
Trigger: GGGAGTGACTGGCATTAACAAGACTGGAAATCGGGG...GCTCACTGCTAAGCTACAAACTCGGACAGGGTCAGAAACAGAGGTGTCCCATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CAA 90 bp CTAAGGATGCTGCGGCTCCTCTGCTTCTTTAAGCTGACGTTGCACTGGGAGGCTCTGCCACTCGTCTTCTaGCCCTTCTCAGAAAGAGAA +
Preference number: 5 (lower is better)
Translates to: LRMLRLLCFFKLTLHWEALPLVF*PFSERE
Trigger: TTCTCTTTCTGAGAAGGGCAAGAAGACGAGTGGCAG...AGCCTCCCAGTGCAACGTCAGCTTAAAGAAGCAGAGGAGCCGCAGCATCCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435525.1
CDS-3UTR CAA 90 bp AGACCAAGAGATGGACTTGGGCCACATCAGCTTGGTGGCTGGTTGAGGCCACAGATGTGTATCCAGCTATaGCAGAGTCTGTGCAGCATG +
Preference number: 5 (lower is better)
Translates to: RPRDGLGPHQLGGWLRPQMCIQL*QSLCSM
Trigger: CATGCTGCACAGACTCTGCAATAGCTGGATACACAT...CTGTGGCCTCAACCAGCCACCAAGCTGATGTGGCCCAAGTCCATCTCTTGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436654.1
CDS TCA 90 bp CAGACAGCCCCTGCACACAGGTGCACCTTCAGAACACACTTTCGATaGGATGAGCATGTCAACGACGCGCAAGATCACAACAATGCAGCT +
Preference number: 5 (lower is better)
Translates to: QTAPAHRCTFRTHFR*DEHVNDAQDHNNAA
Trigger: AGCTGCATTGTTGTGATCTTGCGCGTCGTTGACATGCTCATCTCATCGAAAGTGTGTTCTGAAGGTGCACCTGTGTGCAGGGGCTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310189.3
CDS CCA 90 bp CTTTCCATAGTCAAGCACCGTCACCTCTGGAAGAAGGTACTTAGCTaGTGGCAGATGCCAGCAGACACTCTCTCCCCGTCTAGTGACAAT +
Preference number: 5 (lower is better)
Translates to: LSIVKHRHLWKKVLS*WQMPADTLSPSSDN
Trigger: ATTGTCACTAGACGGGGAGAGAGTGTCTGCTGGCATCTGCCACCAGCTAAGTACCTTCTTCCAGAGGTGACGGTGCTTGACTATGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310189.3
CDS-3UTR CAA 90 bp CCTAAGTGGTGCTGTGGTCCTTTTGCCTTTGTACCCTTCAGTGGCCAATGCCAGGTGGTCCTTTTGCCTTaGTACCCTTCAGTGGCCAAT +
Preference number: 5 (lower is better)
Translates to: PKWCCGPFAFVPFSGQCQVVLLP*YPSVAN
Trigger: ATTGGCCACTGAAGGGTACAAAGGCAAAAGGACCAC...CTGGCATTGGCCACTGAAGGGTACAAAGGCAAAAGGACCACAGCACCACTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CAA 90 bp TTTGGGGCAATGAGTCCCACATCTAGACAGGCTTCCCCAACCCTTGGCTCAGAAGTGGTCCTTTTGCCTTaGTACCCTTCAGTGGCCAAT +
Preference number: 5 (lower is better)
Translates to: FGAMSPTSRQASPTLGSEVVLLP*YPSVAN
Trigger: ATTGGCCACTGAAGGGTACAAAGGCAAAAGGACCAC...TTCTGAGCCAAGGGTTGGGGAAGCCTGTCTAGATGTGGGACTCATTGCCCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CAA 90 bp TGGACTTGGGCCACATCAGCTTGGTGGCTGGTTGAGGCCACAGGTTCTCAAGAGATGTGGATTACTGGTTaGGAACACTCAGAATGCTGG +
Preference number: 5 (lower is better)
Translates to: WTWATSAWWLVEATGSQEMWITG*EHSECW
Trigger: CCAGCATTCTGAGTGTTCCAAACCAGTAATCCACAT...CTCTTGAGAACCTGTGGCCTCAACCAGCCACCAAGCTGATGTGGCCCAAGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CAA 90 bp AGTGGTGCTGTGGTCCTTTTGCCTTTGTACCCTTCAGTGGCCAATGCCAGGAAGGGTCAGGGTTCTCTTTaGGCTAAAGAGTTGGGGGTA +
Preference number: 5 (lower is better)
Translates to: SGAVVLLPLYPSVANARKGQGSL*AKELGV
Trigger: TACCCCCAACTCTTTAGCCAAAAGAGAACCCTGACC...CTTCCTGGCATTGGCCACTGAAGGGTACAAAGGCAAAAGGACCACAGCACCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS CCA 90 bp ATGGTGGCAATGGCTGCTAACCCAAGCCGCTGCTGCAGAAGCAGCTaGAAACTCAAAGGCTCCAAATCCTCATTTCTCCAGGTCAAAAGT +
Preference number: 5 (lower is better)
Translates to: MVAMAANPSRCCRSS*KLKGSKSSFLQVKS
Trigger: ACTTTTGACCTGGAGAAATGAGGATTTGGAGCCTTTGAGTTTCCAGCTGCTTCTGCAGCAGCGGCTTGGGTTAGCAGCCATTGCCACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310189.3
CDS-3UTR CAA 90 bp TGGACTTGGGCCACATCAGCTTGGTGGCTGGTTGAGGCCACAGGTTCTCAAGAGTATGAGGCAGGGGAATaGTCAACAATGATCACTTTG +
Preference number: 5 (lower is better)
Translates to: WTWATSAWWLVEATGSQEYEAGE*STMITL
Trigger: CAAAGTGATCATTGTTGACAATTCCCCTGCCTCATA...CTCTTGAGAACCTGTGGCCTCAACCAGCCACCAAGCTGATGTGGCCCAAGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CAA 90 bp AGAATTTTGGAGTGTGGTCAAATAAGGTGCACAGATTCCAGAACCCTCAGAGGGGGACAGGTGGTCTGCTaGGAGGGGAGGACAGTTGAA +
Preference number: 5 (lower is better)
Translates to: RILECGQIRCTDSRTLRGGQVVC*EGRTVE
Trigger: TTCAACTGTCCTCCCCTCCAAGCAGACCACCTGTCC...CCCTCTGAGGGTTCTGGAATCTGTGCACCTTATTTGACCACACTCCAAAATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CAA 90 bp AAAATCCATGCTACACCTAAGTGGTGCTGTGGTCCTTTTGCCTTTGTACCCTTCGCAGCATGCCACAGGTaGTCAGAGCAGTCACACCTG +
Preference number: 5 (lower is better)
Translates to: KIHATPKWCCGPFAFVPFAACHR*SEQSHL
Trigger: CAGGTGTGACTGCTCTGACAACCTGTGGCATGCTGC...GAAGGGTACAAAGGCAAAAGGACCACAGCACCACTTAGGTGTAGCATGGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CAA 90 bp AGACAGGCTTCCCCAACCCTTGGCTCAGAAATAGGCTGTGCTTCAAAGGAGAAGGTGGTCCTTTTGCCTTaGTACCCTTCAGTGGCCAAT +
Preference number: 5 (lower is better)
Translates to: RQASPTLGSEIGCASKEKVVLLP*YPSVAN
Trigger: ATTGGCCACTGAAGGGTACAAAGGCAAAAGGACCAC...CTTCTCCTTTGAAGCACAGCCTATTTCTGAGCCAAGGGTTGGGGAAGCCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CAA 90 bp ATGCCAACTGTCCAGCACAGCACCTTTAAAAGCAGAGGCACAAACGTAGGATTGGACCAAGAGATGGACTaGGGCCACATCAGCTTGGTG +
Preference number: 5 (lower is better)
Translates to: MPTVQHSTFKSRGTNVGLDQEMD*GHISLV
Trigger: CACCAAGCTGATGTGGCCCAAGTCCATCTCTTGGTC...CAATCCTACGTTTGTGCCTCTGCTTTTAAAGGTGCTGTGCTGGACAGTTGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CAA 90 bp ACAGGTTGTCAGAGCAGTCACACCTGTTGGGGGACAGGCTCCTGTGACTCACTCTTACAGACTGTCTTGTaGTCAAACAAGGAACATGGC +
Preference number: 5 (lower is better)
Translates to: TGCQSSHTCWGTGSCDSLLQTVL*SNKEHG
Trigger: GCCATGTTCCTTGTTTGACAACAAGACAGTCTGTAA...GAGTGAGTCACAGGAGCCTGTCCCCCAACAGGTGTGACTGCTCTGACAACCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CAA 90 bp CCCTGGTTTGGGGCAATGAGTCCCACATCTAGACAGGCTTCCCCAACCCTTGGCGCTGTTCTATTTGAATaGGCATGTGGATTACTGGTT +
Preference number: 5 (lower is better)
Translates to: PWFGAMSPTSRQASPTLGAVLFE*ACGLLV
Trigger: AACCAGTAATCCACATGCCAATTCAAATAGAACAGC...GCCAAGGGTTGGGGAAGCCTGTCTAGATGTGGGACTCATTGCCCCAAACCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CAA 90 bp CCCTGGTTTGGGGCAATGAGTCCCACATCTAGACAGGCTTCCCCAACCCTTGGCAGAGTTGGGGGTATTTaGGTAACATGGGAAGTATAT +
Preference number: 5 (lower is better)
Translates to: PWFGAMSPTSRQASPTLGRVGGI*VTWEVY
Trigger: ATATACTTCCCATGTTACCAAAATACCCCCAACTCT...GCCAAGGGTTGGGGAAGCCTGTCTAGATGTGGGACTCATTGCCCCAAACCAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CAA 90 bp ATGAGTCCCACATCTAGACAGGCTTCCCCAACCCTTGGCTCAGAAATAGGCTGTGGCACAAACGTAGGATaGTTTGACCATAGGGCTGTG +
Preference number: 5 (lower is better)
Translates to: MSPTSRQASPTLGSEIGCGTNVG*FDHRAV
Trigger: CACAGCCCTATGGTCAAACAATCCTACGTTTGTGCC...ACAGCCTATTTCTGAGCCAAGGGTTGGGGAAGCCTGTCTAGATGTGGGACTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CAA 90 bp AACCTTTTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTAGCACAGGGTCTGCATACTaGGCCAAGCTGGCAGTAAAG +
Preference number: 5 (lower is better)
Translates to: NLLIDNTRPWKRAHSACSTGSAY*AKLAVK
Trigger: CTTTACTGCCAGCTTGGCCAAGTATGCAGACCCTGT...GCTACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000443503.6
ENST00000447745.5
CDS-3UTR CAA 90 bp CCCTGGTTTGGGGCAATGAGTCCCACATCTAGACAGGCTTCCCCAACCCTTGGCGACCTCAAGACAAACTaGTCACCATCAGAAATAATA +
Preference number: 5 (lower is better)
Translates to: PWFGAMSPTSRQASPTLGDLKTN*SPSEII
Trigger: TATTATTTCTGATGGTGACAAGTTTGTCTTGAGGTC...GCCAAGGGTTGGGGAAGCCTGTCTAGATGTGGGACTCATTGCCCCAAACCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CAA 90 bp ATGAGTCCCACATCTAGACAGGCTTCCCCAACCCTTGGCTCAGAAATAGGCTGTAGAGCATTAACAACATaGGGAGTGCCTGTGCACTTC +
Preference number: 5 (lower is better)
Translates to: MSPTSRQASPTLGSEIGCRALTT*GVPVHF
Trigger: GAAGTGCACAGGCACTCCCAATGTTGTTAATGCTCT...ACAGCCTATTTCTGAGCCAAGGGTTGGGGAAGCCTGTCTAGATGTGGGACTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CAA 90 bp CCTAAGTGGTGCTGTGGTCCTTTTGCCTTTGTACCCTTCAGTGGCCAATGCCAGGACATCTCATCAAAATaGCACCACGTCAAAGGAGCT +
Preference number: 5 (lower is better)
Translates to: PKWCCGPFAFVPFSGQCQDISSK*HHVKGA
Trigger: AGCTCCTTTGACGTGGTGCAATTTTGATGAGATGTC...CTGGCATTGGCCACTGAAGGGTACAAAGGCAAAAGGACCACAGCACCACTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CAA 90 bp CCTAAGTGGTGCTGTGGTCCTTTTGCCTTTGTACCCTTCAGTGGCCAATGCCAGTTACAGACTGTCTTGTaGTCAAACAAGGAACATGGC +
Preference number: 5 (lower is better)
Translates to: PKWCCGPFAFVPFSGQCQLQTVL*SNKEHG
Trigger: GCCATGTTCCTTGTTTGACAACAAGACAGTCTGTAA...CTGGCATTGGCCACTGAAGGGTACAAAGGCAAAAGGACCACAGCACCACTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CAA 90 bp TTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTAGCATTTCCCAGACCAAAGTGCTGTaGGGAGGATGTAATTGGCAG +
Preference number: 5 (lower is better)
Translates to: LIDNTRPWKRAHSACSISQTKVL*GGCNWQ
Trigger: CTGCCAATTACATCCTCCCAACAGCACTTTGGTCTG...GGAAATGCTACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000443503.6
ENST00000447745.5
CDS-3UTR CAA 90 bp AACCTTTTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTAGCCAGACCAAAGTGCTGTaGGGAGGATGTAATTGGCAG +
Preference number: 5 (lower is better)
Translates to: NLLIDNTRPWKRAHSACSQTKVL*GGCNWQ
Trigger: CTGCCAATTACATCCTCCCAACAGCACTTTGGTCTG...GCTACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000443503.6
ENST00000447745.5
CDS-3UTR CAA 90 bp AGTGGTGCTGTGGTCCTTTTGCCTTTGTACCCTTCAGTGGCCAATGCCAGGAAGATCATTGCAAACCTTTaGATTGACAATACTCGCCCC +
Preference number: 5 (lower is better)
Translates to: SGAVVLLPLYPSVANARKIIANL*IDNTRP
Trigger: GGGGCGAGTATTGTCAATCAAAAGGTTTGCAATGAT...CTTCCTGGCATTGGCCACTGAAGGGTACAAAGGCAAAAGGACCACAGCACCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS CCA 90 bp CCAAATCCTCATTTCTCCAGGTCAAAAGTAAATATGCAGGGTGGATaGAACCCTAGAGGTCATCTGTCCCATTCTGTCCATGGCCTTCCT +
Preference number: 5 (lower is better)
Translates to: PNPHFSRSKVNMQGG*NPRGHLSHSVHGLP
Trigger: AGGAAGGCCATGGACAGAATGGGACAGATGACCTCTAGGGTTCCATCCACCCTGCATATTTACTTTTGACCTGGAGAAATGAGGATTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310189.3
CDS-3UTR CAA 90 bp TTTGGCAGGAAGGAAATCATTGCAAACCTTTTGATTGACAATACTCGCCCCTGGACAGGGTCTGCATACTaGGCCAAGCTGGCAGTAAAG +
Preference number: 5 (lower is better)
Translates to: FGRKEIIANLLIDNTRPWTGSAY*AKLAVK
Trigger: CTTTACTGCCAGCTTGGCCAAGTATGCAGACCCTGT...CCAGGGGCGAGTATTGTCAATCAAAAGGTTTGCAATGATTTCCTTCCTGCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000443503.6
ENST00000447745.5
CDS-3UTR CAA 90 bp GATACTGACTGCAGTTTAAAATCCATGCTACACCTAAGTGGTGCTGTGGTCCTTGGTGCTGTGGTCCTTTaGCCTTTGTACCCTTCAGTG +
Preference number: 5 (lower is better)
Translates to: DTDCSLKSMLHLSGAVVLGAVVL*PLYPSV
Trigger: CACTGAAGGGTACAAAGGCAAAAGGACCACAGCACC...AAGGACCACAGCACCACTTAGGTGTAGCATGGATTTTAAACTGCAGTCAGTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CAA 90 bp TGTCAAACAAGGAACATGGCACTGCTTAAACACCAAACTGGGAAAGGCTGCAAACCCCGATTTCCAGTCTaGTTAATGCCAGTCACTCCC +
Preference number: 5 (lower is better)
Translates to: CQTRNMALLKHQTGKGCKPRFPV*LMPVTP
Trigger: GGGAGTGACTGGCATTAACAAGACTGGAAATCGGGG...TTTGCAGCCTTTCCCAGTTTGGTGTTTAAGCAGTGCCATGTTCCTTGTTTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CAA 90 bp GACACCTCTGTTTCTGACCCTGTCCGAGTTTGTAGCTTAGCAGTGAGCATATTCAGAGCATTAACAACATaGGGAGTGCCTGTGCACTTC +
Preference number: 5 (lower is better)
Translates to: DTSVSDPVRVCSLAVSIFRALTT*GVPVHF
Trigger: GAAGTGCACAGGCACTCCCAATGTTGTTAATGCTCT...GAATATGCTCACTGCTAAGCTACAAACTCGGACAGGGTCAGAAACAGAGGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS GCA 90 bp AGCTCTTCCCTTCTGAATATTCACACAGCAGTCCACAGACCAAAGTaGTGTTGGGAGGATGTAATTGGCAGCTGGCTTCATTACTATTGC +
Preference number: 5 (lower is better)
Translates to: SSSLLNIHTAVHRPK*CWEDVIGSWLHYYC
Trigger: GCAATAGTAATGAAGCCAGCTGCCAATTACATCCTCCCAACAGCACTTTGGTCTGTGGACTGCTGTGTGAATATTCAGAAGGGAAGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447745.5
CDS CCA 90 bp ATCAATGACCACACATTTCTTTCCATAGTCAAGCACCGTCACCTCTaGAAGAAGGTACTTAGCTGGTGGACTTGGTATGGGAATGACCTG +
Preference number: 5 (lower is better)
Translates to: INDHTFLSIVKHRHL*KKVLSWWTWYGNDL
Trigger: CAGGTCATTCCCATACCAAGTCCACCAGCTAAGTACCTTCTTCCAGAGGTGACGGTGCTTGACTATGGAAAGAAATGTGTGGTCATTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000486978.5
CDS-3UTR CAA 90 bp AGGAAGGAAATCATTGCAAACCTTTTGATTGACAATACTCGCCCCTGGAAACGTACAGGGTCTGCATACTaGGCCAAGCTGGCAGTAAAG +
Preference number: 5 (lower is better)
Translates to: RKEIIANLLIDNTRPWKRTGSAY*AKLAVK
Trigger: CTTTACTGCCAGCTTGGCCAAGTATGCAGACCCTGT...ACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTTTGCAATGATTTCCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000443503.6
ENST00000447745.5
CDS-3UTR CAA 90 bp CACAGGTTCTCAAGAGAGAACAGTCAGCTTATTTATCAAACAGGATCTGATACTGGCCAGGGCTACCTATaGCAGAGTCTGTGCAGCATG +
Preference number: 5 (lower is better)
Translates to: HRFSRENSQLIYQTGSDTGQGYL*QSLCSM
Trigger: CATGCTGCACAGACTCTGCAATAGGTAGCCCTGGCC...AGTATCAGATCCTGTTTGATAAATAAGCTGACTGTTCTCTCTTGAGAACCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CAA 90 bp AGTGGTGCTGTGGTCCTTTTGCCTTTGTACCCTTCAGTGGCCAATGCCAGGAAGACTTTACAGACTGTCTaGTTGTCAAACAAGGAACAT +
Preference number: 5 (lower is better)
Translates to: SGAVVLLPLYPSVANARKTLQTV*LSNKEH
Trigger: ATGTTCCTTGTTTGACAACAAGACAGTCTGTAAAGT...CTTCCTGGCATTGGCCACTGAAGGGTACAAAGGCAAAAGGACCACAGCACCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CAA 90 bp CCTAAGTGGTGCTGTGGTCCTTTTGCCTTTGTACCCTTCAGTGGCCAATGCCAGACTTTACAGACTGTCTaGTTGTCAAACAAGGAACAT +
Preference number: 5 (lower is better)
Translates to: PKWCCGPFAFVPFSGQCQTLQTV*LSNKEH
Trigger: ATGTTCCTTGTTTGACAACAAGACAGTCTGTAAAGT...CTGGCATTGGCCACTGAAGGGTACAAAGGCAAAAGGACCACAGCACCACTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CAA 90 bp ACTACGGCATCTTTATTCATAGCAGCCTGCGGATCCGAAAACTCACACCCTTCCTTTTGGGGTGGGTATTaGCTAAAGATTCTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: TTASLFIAACGSENSHPSFWGGY*LKILWR
Trigger: TCTCCAGAGAATCTTTAGCAAATACCCACCCCAAAA...GGAAGGGTGTGAGTTTTCGGATCCGCAGGCTGCTATGAATAAAGATGCCGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000416688.5
CDS-3UTR CAA 90 bp GACACCTCTGTTTCTGACCCTGTCCGAGTTTGTAGCTTAGCAGTGAGCATATTCTATGAGGCAGGGGAATaGTCAACAATGATCACTTTG +
Preference number: 5 (lower is better)
Translates to: DTSVSDPVRVCSLAVSIFYEAGE*STMITL
Trigger: CAAAGTGATCATTGTTGACAATTCCCCTGCCTCATA...GAATATGCTCACTGCTAAGCTACAAACTCGGACAGGGTCAGAAACAGAGGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000436654.1
ENST00000443503.6
CDS-3UTR CAA 90 bp GGCCACAGGTTCTCAAGAGAGAACAGTCAGCTTATTTATCAAACAGGATCTGATGGTCAGGGTTCTCTTTaGGCTAAAGAGTTGGGGGTA +
Preference number: 5 (lower is better)
Translates to: GHRFSRENSQLIYQTGSDGQGSL*AKELGV
Trigger: TACCCCCAACTCTTTAGCCAAAAGAGAACCCTGACC...ATCAGATCCTGTTTGATAAATAAGCTGACTGTTCTCTCTTGAGAACCTGTGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CAA 90 bp GACTGCAGTTTAAAATCCATGCTACACCTAAGTGGTGCTGTGGTCCTTTTGCCTGACATCTCATCAAAATaGCACCACGTCAAAGGAGCT +
Preference number: 5 (lower is better)
Translates to: DCSLKSMLHLSGAVVLLPDISSK*HHVKGA
Trigger: AGCTCCTTTGACGTGGTGCAATTTTGATGAGATGTC...AGGCAAAAGGACCACAGCACCACTTAGGTGTAGCATGGATTTTAAACTGCAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CAA 90 bp AACCTTTTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTAGCCAGGGTTGTAAAATGTaGCCAGGTTACAGACTTACA +
Preference number: 5 (lower is better)
Translates to: NLLIDNTRPWKRAHSACSQGCKM*PGYRLT
Trigger: TGTAAGTCTGTAACCTGGCAACATTTTACAACCCTG...GCTACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CAA 90 bp CTTTTGATTGACAATACTCGCCCCTGGAAACGTGCACATTCCGCATGTAGCATTATCATTGCAAACCTTTaGATTGACAATACTCGCCCC +
Preference number: 5 (lower is better)
Translates to: LLIDNTRPWKRAHSACSIIIANL*IDNTRP
Trigger: GGGGCGAGTATTGTCAATCAAAAGGTTTGCAATGAT...AATGCTACATGCGGAATGTGCACGTTTCCAGGGGCGAGTATTGTCAATCAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000443503.6
ENST00000447745.5
CDS-3UTR CAA 90 bp AGGAAGGAAATCATTGCAAACCTTTTGATTGACAATACTCGCCCCTGGAAACGTCTGGCTTCATTACTATaGCAGAGTCTGTGCAGCATG +
Preference number: 5 (lower is better)
Translates to: RKEIIANLLIDNTRPWKRLASLL*QSLCSM
Trigger: CATGCTGCACAGACTCTGCAATAGTAATGAAGCCAG...ACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTTTGCAATGATTTCCTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447745.5
CDS-3UTR CAA 90 bp AAAATCCATGCTACACCTAAGTGGTGCTGTGGTCCTTTTGCCTTTGTACCCTTCTTGTTTCCTAAAGTGTaGAGCCACACAATTGCAGAT +
Preference number: 5 (lower is better)
Translates to: KIHATPKWCCGPFAFVPFLFPKV*SHTIAD
Trigger: ATCTGCAATTGTGTGGCTCAACACTTTAGGAAACAA...GAAGGGTACAAAGGCAAAAGGACCACAGCACCACTTAGGTGTAGCATGGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CAA 90 bp CACAGGTTCTCAAGAGAGAACAGTCAGCTTATTTATCAAACAGGATCTGATACTCAGACCAAAGTGCTGTaGGGAGGATGTAATTGGCAG +
Preference number: 5 (lower is better)
Translates to: HRFSRENSQLIYQTGSDTQTKVL*GGCNWQ
Trigger: CTGCCAATTACATCCTCCCAACAGCACTTTGGTCTG...AGTATCAGATCCTGTTTGATAAATAAGCTGACTGTTCTCTCTTGAGAACCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CAA 90 bp GGCCACAGGTTCTCAAGAGAGAACAGTCAGCTTATTTATCAAACAGGATCTGATATGTGGATTACTGGTTaGGAACACTCAGAATGCTGG +
Preference number: 5 (lower is better)
Translates to: GHRFSRENSQLIYQTGSDMWITG*EHSECW
Trigger: CCAGCATTCTGAGTGTTCCAAACCAGTAATCCACAT...ATCAGATCCTGTTTGATAAATAAGCTGACTGTTCTCTCTTGAGAACCTGTGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CAA 90 bp GATACTGACTGCAGTTTAAAATCCATGCTACACCTAAGTGGTGCTGTGGTCCTTCAGGGTTGTAAAATGTaGCCAGGTTACAGACTTACA +
Preference number: 5 (lower is better)
Translates to: DTDCSLKSMLHLSGAVVLQGCKM*PGYRLT
Trigger: TGTAAGTCTGTAACCTGGCAACATTTTACAACCCTG...AAGGACCACAGCACCACTTAGGTGTAGCATGGATTTTAAACTGCAGTCAGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CAA 90 bp TTTGGCAGGAAGGAAATCATTGCAAACCTTTTGATTGACAATACTCGCCCCTGGTTGTTTCCTAAAGTGTaGAGCCACACAATTGCAGAT +
Preference number: 5 (lower is better)
Translates to: FGRKEIIANLLIDNTRPWLFPKV*SHTIAD
Trigger: ATCTGCAATTGTGTGGCTCAACACTTTAGGAAACAA...CCAGGGGCGAGTATTGTCAATCAAAAGGTTTGCAATGATTTCCTTCCTGCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CAA 90 bp TTAAAATCCATGCTACACCTAAGTGGTGCTGTGGTCCTTTTGCCTTTGTACCCTAGAGTTGGGGGTATTTaGGTAACATGGGAAGTATAT +
Preference number: 5 (lower is better)
Translates to: LKSMLHLSGAVVLLPLYPRVGGI*VTWEVY
Trigger: ATATACTTCCCATGTTACCAAAATACCCCCAACTCT...AGGGTACAAAGGCAAAAGGACCACAGCACCACTTAGGTGTAGCATGGATTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CAA 90 bp AGGAAGGAAATCATTGCAAACCTTTTGATTGACAATACTCGCCCCTGGAAACGTATCATTGCAAACCTTTaGATTGACAATACTCGCCCC +
Preference number: 5 (lower is better)
Translates to: RKEIIANLLIDNTRPWKRIIANL*IDNTRP
Trigger: GGGGCGAGTATTGTCAATCAAAAGGTTTGCAATGAT...ACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTTTGCAATGATTTCCTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000443503.6
ENST00000447745.5
CDS-3UTR CAA 90 bp AGGAAGGAAATCATTGCAAACCTTTTGATTGACAATACTCGCCCCTGGAAACGTCAAAGATATTTTACTTaGACCCCCGATTTCCAGTCT +
Preference number: 5 (lower is better)
Translates to: RKEIIANLLIDNTRPWKRQRYFT*TPDFQS
Trigger: AGACTGGAAATCGGGGGTCAAAGTAAAATATCTTTG...ACGTTTCCAGGGGCGAGTATTGTCAATCAAAAGGTTTGCAATGATTTCCTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CAA 90 bp CTCTCATTAGGGCCTAATTCTGTGTGGATATCAACACATGACAGACACTTGACTCAAAGATATTTTACTTaGACCCCCGATTTCCAGTCT +
Preference number: 5 (lower is better)
Translates to: LSLGPNSVWISTHDRHLTQRYFT*TPDFQS
Trigger: AGACTGGAAATCGGGGGTCAAAGTAAAATATCTTTG...AGTCAAGTGTCTGTCATGTGTTGATATCCACACAGAATTAGGCCCTAATGAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS-3UTR CAA 90 bp CACAGGTTCTCAAGAGAGAACAGTCAGCTTATTTATCAAACAGGATCTGATACTGACCTCAAGACAAACTaGTCACCATCAGAAATAATA +
Preference number: 5 (lower is better)
Translates to: HRFSRENSQLIYQTGSDTDLKTN*SPSEII
Trigger: TATTATTTCTGATGGTGACAAGTTTGTCTTGAGGTC...AGTATCAGATCCTGTTTGATAAATAAGCTGACTGTTCTCTCTTGAGAACCTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273179.10
ENST00000443503.6
CDS TCA 72 bp CGTCGTCCTCCCGGCTCAGGCCCTCAAAGAAGGGGATaGGGTCCAGCAGCTCCGTGTCCGTCATGTCATCGA +
Preference number: 6 (lower is better)
Translates to: RRPPGSGPQRRG*GPAAPCPSCHR
Trigger: TCGATGACATGACGGACACGGAGCTGCTGGACCTCATCCCCTTCTTTGAGGGCCTGAGCCGGGAGGACGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273179.10
ENST00000310189.3
ENST00000436654.1
ENST00000443503.6
ENST00000447745.5
CDS GCA 72 bp GCAGGCAGAGGCCAGGGCTACCTATTGCAGAGTCTGTaGAGCATGCTGTACACGTCGTCCTCCCGGCTCAGG +
Preference number: 6 (lower is better)
Translates to: AGRGQGYLLQSL*SMLYTSSSRLR
Trigger: CCTGAGCCGGGAGGACGACGTGTACAGCATGCTGCACAGACTCTGCAATAGGTAGCCCTGGCCTCTGCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000310189.3
ENST00000443503.6
CDS GCA 72 bp CATTCTCCTCCACCAGTGGCGGAAGCACACTGGGGCTaGTGGGTGGAGGGGCCTCCACATTGTAATCACGGA +
Preference number: 6 (lower is better)
Translates to: HSPPPVAEAHWG*WVEGPPHCNHG
Trigger: TCCGTGATTACAATGTGGAGGCCCCTCCACCCAGCAGCCCCAGTGTGCTTCCGCCACTGGTGGAGGAGAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000443503.6
ENST00000486978.5
CDS GCA 72 bp GAGGCCAGGGCTACCTATTGCAGAGTCTGTGCAGCATaGTGTACACGTCGTCCTCCCGGCTCAGGCCCTCAA +
Preference number: 6 (lower is better)
Translates to: EARATYCRVCAA*CTRRPPGSGPQ
Trigger: TTGAGGGCCTGAGCCGGGAGGACGACGTGTACAGCATGCTGCACAGACTCTGCAATAGGTAGCCCTGGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273179.10
ENST00000310189.3
ENST00000443503.6
CDS TCA 72 bp TGGAGGCTTCTGGTCTGTAGGTCCAGGTTGTGGCTGTaGTGGTGGCAATGGCTGCTAACCCAAGCCGCTGCT +
Preference number: 6 (lower is better)
Translates to: WRLLVCRSRLWL*WWQWLLTQAAA
Trigger: AGCAGCGGCTTGGGTTAGCAGCCATTGCCACCATCACAGCCACAACCTGGACCTACAGACCAGAAGCCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310189.3
CDS CCA 72 bp TCCTTGCCCTTAAAGGTCCTCCATGGTCTTTGCCATTaGGGTGCTGACTCCTCCCAGCCCCTGGAGGCTTCT +
Preference number: 6 (lower is better)
Translates to: SLPLKVLHGLCH*GADSSQPLEAS
Trigger: AGAAGCCTCCAGGGGCTGGGAGGAGTCAGCACCCCAATGGCAAAGACCATGGAGGACCTTTAAGGGCAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310189.3
CDS GCA 72 bp CCATGTGTATCCAGCTATTGCAGAGTCTGTGCAGCATaGTGTACACGTCGTCCTCCCGGCTCAGGCCCTCAA +
Preference number: 6 (lower is better)
Translates to: PCVSSYCRVCAA*CTRRPPGSGPQ
Trigger: TTGAGGGCCTGAGCCGGGAGGACGACGTGTACAGCATGCTGCACAGACTCTGCAATAGCTGGATACACATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436654.1
CDS GCA 72 bp CAGCAGAAGAAGGAGCTAAGGATGCTGCGGCTCCTCTaGTTCTTTAAGCTGACGTTGCACTGGGAGGCCAGG +
Preference number: 6 (lower is better)
Translates to: QQKKELRMLRLL*FFKLTLHWEAR
Trigger: CCTGGCCTCCCAGTGCAACGTCAGCTTAAAGAAGCAGAGGAGCCGCAGCATCCTTAGCTCCTTCTTCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486978.5
CDS GCA 72 bp GTGATGGTGGCAATGGCTGCTAACCCAAGCCGCTGCTaGAGAAGCAGCTGGAAACTCAAAGGCTCCAAATCC +
Preference number: 6 (lower is better)
Translates to: VMVAMAANPSRC*RSSWKLKGSKS
Trigger: GGATTTGGAGCCTTTGAGTTTCCAGCTGCTTCTGCAGCAGCGGCTTGGGTTAGCAGCCATTGCCACCATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310189.3
CDS GCA 72 bp GCTGTGATGGTGGCAATGGCTGCTAACCCAAGCCGCTaGTGCAGAAGCAGCTGGAAACTCAAAGGCTCCAAA +
Preference number: 6 (lower is better)
Translates to: AVMVAMAANPSR*CRSSWKLKGSK
Trigger: TTTGGAGCCTTTGAGTTTCCAGCTGCTTCTGCAGCAGCGGCTTGGGTTAGCAGCCATTGCCACCATCACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310189.3
CDS GCA 72 bp CTCTCTCCCCGTCTAGTGACAATCAGTCTTCAGCTCTaGTCTAGTAGGAGAGTGCAGACAGCCCCTGCACAC +
Preference number: 6 (lower is better)
Translates to: LSPRLVTISLQL*SSRRVQTAPAH
Trigger: GTGTGCAGGGGCTGTCTGCACTCTCCTACTAGAGCAGAGCTGAAGACTGATTGTCACTAGACGGGGAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310189.3
CDS GCA 72 bp AGCTGGCTTCATTACTATTGCAGAGTCTGTGCAGCATaGTGTACACGTCGTCCTCCCGGCTCAGGCCCTCAA +
Preference number: 6 (lower is better)
Translates to: SWLHYYCRVCAA*CTRRPPGSGPQ
Trigger: TTGAGGGCCTGAGCCGGGAGGACGACGTGTACAGCATGCTGCACAGACTCTGCAATAGTAATGAAGCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447745.5
CDS GCA 72 bp GTCACCTCTGGAAGAAGGTACTTAGCTGGTGGCAGATaGCAGCAGACACTCTCTCCCCGTCTAGTGACAATC +
Preference number: 6 (lower is better)
Translates to: VTSGRRYLAGGR*QQTLSPRLVTI
Trigger: GATTGTCACTAGACGGGGAGAGAGTGTCTGCTGGCATCTGCCACCAGCTAAGTACCTTCTTCCAGAGGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310189.3
CDS GCA 72 bp AATTGGCAGCTGGCTTCATTACTATTGCAGAGTCTGTaGAGCATGCTGTACACGTCGTCCTCCCGGCTCAGG +
Preference number: 6 (lower is better)
Translates to: NWQLASLLLQSL*SMLYTSSSRLR
Trigger: CCTGAGCCGGGAGGACGACGTGTACAGCATGCTGCACAGACTCTGCAATAGTAATGAAGCCAGCTGCCAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447745.5
CDS CAA 90 bp CCCAGGTGTGTAGACAACTTTCTGATTCTTCTGCCACTCGTCTTCTaGCCCTTCTCAGAAAGAGAATCTTTCTCGCCCGCGCCCGGCAAC +
Preference number: 6 (lower is better)
Translates to: PRCVDNFLILLPLVF*PFSERESFSPAPGN
Trigger: GTTGCCGGGCGCGGGCGAGAAAGATTCTCTTTCTGAGAAGGGCAAGAAGACGAGTGGCAGAAGAATCAGAAAGTTGTCTACACACCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435525.1
CDS CCA 72 bp ATGGCTGCTAACCCAAGCCGCTGCTGCAGAAGCAGCTaGAAACTCAAAGGCTCCAAATCCTCATTTCTCCAG +
Preference number: 6 (lower is better)
Translates to: MAANPSRCCRSS*KLKGSKSSFLQ
Trigger: CTGGAGAAATGAGGATTTGGAGCCTTTGAGTTTCCAGCTGCTTCTGCAGCAGCGGCTTGGGTTAGCAGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310189.3
CDS TCA 72 bp CCTGCACACAGGTGCACCTTCAGAACACACTTTCGATaGGATGAGCATGTCAACGACGCGCAAGATCACAAC +
Preference number: 6 (lower is better)
Translates to: PAHRCTFRTHFR*DEHVNDAQDHN
Trigger: GTTGTGATCTTGCGCGTCGTTGACATGCTCATCTCATCGAAAGTGTGTTCTGAAGGTGCACCTGTGTGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310189.3
CDS TCA 72 bp ACACAGGTGCACCTTCAGAACACACTTTCGATGAGATaGGCATGTCAACGACGCGCAAGATCACAACAATGC +
Preference number: 6 (lower is better)
Translates to: TQVHLQNTLSMR*ACQRRARSQQC
Trigger: GCATTGTTGTGATCTTGCGCGTCGTTGACATGCTCATCTCATCGAAAGTGTGTTCTGAAGGTGCACCTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310189.3
CDS TCA 72 bp ATGGACACTTTTTCCCGAGAGTCCACCATAAGTGGGTaGCTTGTGGCATTTTCCTGTTGCCTGCTGATGTAT +
Preference number: 6 (lower is better)
Translates to: MDTFSRESTISG*LVAFSCCLLMY
Trigger: ATACATCAGCAGGCAACAGGAAAATGCCACAAGTCACCCACTTATGGTGGACTCTCGGGAAAAAGTGTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416688.5
CDS CAA 72 bp ATTTGTGAGTGTCCAGCAATCTGTTTTACGCTGTCCTaGCCCTTAAAGGTCCTCCATGGTCTTTGCCATTGG +
Preference number: 6 (lower is better)
Translates to: ICECPAICFTLS*PLKVLHGLCHW
Trigger: CCAATGGCAAAGACCATGGAGGACCTTTAAGGGCAAGGACAGCGTAAAACAGATTGCTGGACACTCACAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310189.3
CDS CAA 90 bp TTCCCTTCTGAATATTCACACAGCAGTCCACAGACCAAAGTGCTGTaGGGAGGATGTAATTGGCAGCTGGCTTCATTACTATTGCAGAGT +
Preference number: 6 (lower is better)
Translates to: FPSEYSHSSPQTKVL*GGCNWQLASLLLQS
Trigger: ACTCTGCAATAGTAATGAAGCCAGCTGCCAATTACATCCTCCCAACAGCACTTTGGTCTGTGGACTGCTGTGTGAATATTCAGAAGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447745.5
CDS CCA 72 bp CATTTCTCCAGGTCAAAAGTAAATATGCAGGGTGGATaGAACCCTAGAGGTCATCTGTCCCATTCTGTCCAT +
Preference number: 6 (lower is better)
Translates to: HFSRSKVNMQGG*NPRGHLSHSVH
Trigger: ATGGACAGAATGGGACAGATGACCTCTAGGGTTCCATCCACCCTGCATATTTACTTTTGACCTGGAGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310189.3
CDS CAA 72 bp GAATATTCACACAGCAGTCCACAGACCAAAGTGCTGTaGGGAGGATGTAATTGGCAGCTGGCTTCATTACTA +
Preference number: 6 (lower is better)
Translates to: EYSHSSPQTKVL*GGCNWQLASLL
Trigger: TAGTAATGAAGCCAGCTGCCAATTACATCCTCCCAACAGCACTTTGGTCTGTGGACTGCTGTGTGAATATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447745.5
CDS TCA 72 bp TGTGTGTGTATACAGCATGAGGTATGCATATATTTGTaGGTGTCCAGCAATCTGTTTTACGCTGTCCTTGCC +
Preference number: 6 (lower is better)
Translates to: CVCIQHEVCIYL*VSSNLFYAVLA
Trigger: GGCAAGGACAGCGTAAAACAGATTGCTGGACACTCACAAATATATGCATACCTCATGCTGTATACACACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310189.3