Pregenerated sensors for CTDSP2 (Homo sapiens)
Ensembl gene IDs: ENSG00000175215Ensembl transcript IDs: ENST00000398073.7, ENST00000547169.5, ENST00000552294.1
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGAATCCCTGAAAAGCAGACTTATGGAAATGATCCCGAGCTTAGCTaGTCCACAAGCCATGGGGACACACGTCCACGCTTTGAGGATTTG | + |
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Preference number: 1 (lower is better) Translates to: RIPEKQTYGNDPELS*STSHGDTRPRFEDL Trigger: CAAATCCTCAAAGCGTGGACGTGTGTCCCCATGGCTTGTGGATCAGCTAAGCTCGGGATCATTTCCATAAGTCTGCTTTTCAGGGATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398073.7 |
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| 3UTR-3UTR TCA 90 bp | ACACACGTCCACGCTTTGAGGATTTGTCTTTTCCCTGCAACCCCAGCGCCGCCGTTCCGGGCCGTGTGGTaGGGCACTCCAGCTTCTACT | + |
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Preference number: 2 (lower is better) Translates to: THVHALRICLFPATPAPPFRAVW*GTPAST Trigger: AGTAGAAGCTGGAGTGCCTCACCACACGGCCCGGAA...CGGCGGCGCTGGGGTTGCAGGGAAAAGACAAATCCTCAAAGCGTGGACGTGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398073.7 |
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| 3UTR-3UTR CCA 90 bp | ACACACGTCCACGCTTTGAGGATTTGTCTTTTCCCTGCAACCCCAGCGCCGCCGAGTCCCCTACTGGGATaGCCGTCGCTTGGAAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: THVHALRICLFPATPAPPSPLLG*PSLGSR Trigger: CCTGCTTCCAAGCGACGGCCATCCCAGTAGGGGACT...CGGCGGCGCTGGGGTTGCAGGGAAAAGACAAATCCTCAAAGCGTGGACGTGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000398073.7 |
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| 3UTR-3UTR CCA 90 bp | ACACACGTCCACGCTTTGAGGATTTGTCTTTTCCCTGCAACCCCAGCGCCGCCGGGGAAAGTCCCCTACTaGGATGGCCGTCGCTTGGAA | + |
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Preference number: 2 (lower is better) Translates to: THVHALRICLFPATPAPPGKVPY*DGRRLE Trigger: TTCCAAGCGACGGCCATCCCAGTAGGGGACTTTCCC...CGGCGGCGCTGGGGTTGCAGGGAAAAGACAAATCCTCAAAGCGTGGACGTGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000398073.7 |
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| 3UTR-3UTR CCA 90 bp | ACACACGTCCACGCTTTGAGGATTTGTCTTTTCCCTGCAACCCCAGCGCCGCCGTCAGCACCCCAGCCTTaGGGAGACATAGAAAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: THVHALRICLFPATPAPPSAPQP*GDIEKA Trigger: GGCCTTTTCTATGTCTCCCCAAGGCTGGGGTGCTGA...CGGCGGCGCTGGGGTTGCAGGGAAAAGACAAATCCTCAAAGCGTGGACGTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000398073.7 |
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| 3UTR-3UTR CCA 90 bp | ACACACGTCCACGCTTTGAGGATTTGTCTTTTCCCTGCAACCCCAGCGCCGCCGTGGGTATCATTGGTCTaGCATTCGCCCACTCGGCAT | + |
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Preference number: 2 (lower is better) Translates to: THVHALRICLFPATPAPPWVSLV*HSPTRH Trigger: ATGCCGAGTGGGCGAATGCCAGACCAATGATACCCA...CGGCGGCGCTGGGGTTGCAGGGAAAAGACAAATCCTCAAAGCGTGGACGTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398073.7 |
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| 3UTR-3UTR CCA 90 bp | ACACACGTCCACGCTTTGAGGATTTGTCTTTTCCCTGCAACCCCAGCGCCGCCGCACTGGATGCTGGTCTaGAAACAAGTTCTCATCTTC | + |
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Preference number: 2 (lower is better) Translates to: THVHALRICLFPATPAPPHWMLV*KQVLIF Trigger: GAAGATGAGAACTTGTTTCCAGACCAGCATCCAGTG...CGGCGGCGCTGGGGTTGCAGGGAAAAGACAAATCCTCAAAGCGTGGACGTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398073.7 |
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| 3UTR-3UTR CAA 90 bp | ACACACGTCCACGCTTTGAGGATTTGTCTTTTCCCTGCAACCCCAGCGCCGCCGACACATCTCAACAAGTaGGCGGCAGGTAGCTCTGGG | + |
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Preference number: 3 (lower is better) Translates to: THVHALRICLFPATPAPPTHLNK*AAGSSG Trigger: CCCAGAGCTACCTGCCGCCAACTTGTTGAGATGTGT...CGGCGGCGCTGGGGTTGCAGGGAAAAGACAAATCCTCAAAGCGTGGACGTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398073.7 |
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| 3UTR GCA 72 bp | GACACACGTCCACGCTTTGAGGATTTGTCTTTTCCCTaGAACCCCAGCGCCGCCGACATTCATTACAGGCCC | + |
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Preference number: 3 (lower is better) Translates to: DTRPRFEDLSFP*NPSAADIHYRP Trigger: GGGCCTGTAATGAATGTCGGCGGCGCTGGGGTTGCAGGGAAAAGACAAATCCTCAAAGCGTGGACGTGTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398073.7 |
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| 3UTR TCA 72 bp | GAAAAGCAGACTTATGGAAATGATCCCGAGCTTAGCTaGTCCACAAGCCATGGGGACACACGTCCACGCTTT | + |
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Preference number: 3 (lower is better) Translates to: EKQTYGNDPELS*STSHGDTRPRF Trigger: AAAGCGTGGACGTGTGTCCCCATGGCTTGTGGATCAGCTAAGCTCGGGATCATTTCCATAAGTCTGCTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398073.7 |
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| CDS-3UTR CCA 90 bp | ACACACGTCCACGCTTTGAGGATTTGTCTTTTCCCTGCAACCCCAGCGCCGCCGGGGATGGCCGTCGCTTaGAAGCAGGGCAGGCTAAGG | + |
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Preference number: 4 (lower is better) Translates to: THVHALRICLFPATPAPPGMAVA*KQGRLR Trigger: CCTTAGCCTGCCCTGCTTCCAAGCGACGGCCATCCC...CGGCGGCGCTGGGGTTGCAGGGAAAAGACAAATCCTCAAAGCGTGGACGTGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000398073.7 |
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| CDS-3UTR TCA 90 bp | ACACACGTCCACGCTTTGAGGATTTGTCTTTTCCCTGCAACCCCAGCGCCGCCGGATCCCGAGCTTAGCTaGTCCACAAGCCATGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: THVHALRICLFPATPAPPDPELS*STSHGD Trigger: GTCCCCATGGCTTGTGGATCAGCTAAGCTCGGGATC...CGGCGGCGCTGGGGTTGCAGGGAAAAGACAAATCCTCAAAGCGTGGACGTGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000398073.7 |
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| CDS-3UTR GCA 90 bp | ACACACGTCCACGCTTTGAGGATTTGTCTTTTCCCTGCAACCCCAGCGCCGCCGGATTTGTCTTTTCCCTaGAACCCCAGCGCCGCCGAC | + |
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Preference number: 4 (lower is better) Translates to: THVHALRICLFPATPAPPDLSFP*NPSAAD Trigger: GTCGGCGGCGCTGGGGTTGCAGGGAAAAGACAAATC...CGGCGGCGCTGGGGTTGCAGGGAAAAGACAAATCCTCAAAGCGTGGACGTGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000398073.7 |
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| CDS-3UTR GCA 90 bp | ACACACGTCCACGCTTTGAGGATTTGTCTTTTCCCTGCAACCCCAGCGCCGCCGCTTGACTGGCCAACATaGTGGGCGCGAAAACAGCAG | + |
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Preference number: 4 (lower is better) Translates to: THVHALRICLFPATPAPPLDWPT*WARKQQ Trigger: CTGCTGTTTTCGCGCCCAGCATGTTGGCCAGTCAAG...CGGCGGCGCTGGGGTTGCAGGGAAAAGACAAATCCTCAAAGCGTGGACGTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000398073.7 |
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| CDS-3UTR GCA 90 bp | ACACACGTCCACGCTTTGAGGATTTGTCTTTTCCCTGCAACCCCAGCGCCGCCGGGTGTAGACGTCCTCTaGTCCGCTCAGCTCCTCAAA | + |
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Preference number: 4 (lower is better) Translates to: THVHALRICLFPATPAPPGVDVL*SAQLLK Trigger: TTTGAGGAGCTGAGCGGAGCAGAGGACGTCTACACC...CGGCGGCGCTGGGGTTGCAGGGAAAAGACAAATCCTCAAAGCGTGGACGTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398073.7 |
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| CDS-3UTR TCA 90 bp | ACACACGTCCACGCTTTGAGGATTTGTCTTTTCCCTGCAACCCCAGCGCCGCCGAGCACATACACCTGGTaGGTGGTCCCCTCAATCTCT | + |
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Preference number: 4 (lower is better) Translates to: THVHALRICLFPATPAPPSTYTW*VVPSIS Trigger: AGAGATTGAGGGGACCACTCACCAGGTGTATGTGCT...CGGCGGCGCTGGGGTTGCAGGGAAAAGACAAATCCTCAAAGCGTGGACGTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000398073.7 |
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| CDS-3UTR TCA 90 bp | ACACACGTCCACGCTTTGAGGATTTGTCTTTTCCCTGCAACCCCAGCGCCGCCGCCACATAAGGCCTCTTaGGCACATACACCTGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: THVHALRICLFPATPAPPPHKAS*AHTPGE Trigger: CTCACCAGGTGTATGTGCTCAAGAGGCCTTATGTGG...CGGCGGCGCTGGGGTTGCAGGGAAAAGACAAATCCTCAAAGCGTGGACGTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398073.7 |
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| CDS-3UTR TCA 90 bp | ACACACGTCCACGCTTTGAGGATTTGTCTTTTCCCTGCAACCCCAGCGCCGCCGAGCAGAAAAGGGCCTTaGAGATGTTACGTCCACGAG | + |
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Preference number: 4 (lower is better) Translates to: THVHALRICLFPATPAPPSRKGP*RCYVHE Trigger: CTCGTGGACGTAACATCTTCAAGGCCCTTTTCTGCT...CGGCGGCGCTGGGGTTGCAGGGAAAAGACAAATCCTCAAAGCGTGGACGTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000398073.7 |
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| CDS-3UTR TCA 90 bp | ACACACGTCCACGCTTTGAGGATTTGTCTTTTCCCTGCAACCCCAGCGCCGCCGCACACGTCCACGCTTTaGGGATTTGTCTTTTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: THVHALRICLFPATPAPPHTSTL*GFVFSL Trigger: CAGGGAAAAGACAAATCCTCAAAGCGTGGACGTGTG...CGGCGGCGCTGGGGTTGCAGGGAAAAGACAAATCCTCAAAGCGTGGACGTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000398073.7 |
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| CDS-3UTR GCA 90 bp | ACACACGTCCACGCTTTGAGGATTTGTCTTTTCCCTGCAACCCCAGCGCCGCCGTGGAACAGAAGTCCTTaGACCAGCACCAGCAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: THVHALRICLFPATPAPPWNRSP*TSTSRE Trigger: TTCTCTGCTGGTGCTGGTGCAAGGACTTCTGTTCCA...CGGCGGCGCTGGGGTTGCAGGGAAAAGACAAATCCTCAAAGCGTGGACGTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398073.7 |
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| CDS-3UTR GCA 90 bp | ACACACGTCCACGCTTTGAGGATTTGTCTTTTCCCTGCAACCCCAGCGCCGCCGCTGAGAGCACGAAGCTaGTGCTCTACTACCTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: THVHALRICLFPATPAPPLRARS*CSTTCF Trigger: AAAGCAGGTAGTAGAGCAGCAGCTTCGTGCTCTCAG...CGGCGGCGCTGGGGTTGCAGGGAAAAGACAAATCCTCAAAGCGTGGACGTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398073.7 |
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| CDS-3UTR CCA 90 bp | ACACACGTCCACGCTTTGAGGATTTGTCTTTTCCCTGCAACCCCAGCGCCGCCGGACAAGAAGGGAAGGTaGCACCACAACGCTAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: THVHALRICLFPATPAPPDKKGR*HHNARE Trigger: TTCTCTAGCGTTGTGGTGCCACCTTCCCTTCTTGTC...CGGCGGCGCTGGGGTTGCAGGGAAAAGACAAATCCTCAAAGCGTGGACGTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398073.7 |
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| CDS-3UTR TCA 90 bp | ACACACGTCCACGCTTTGAGGATTTGTCTTTTCCCTGCAACCCCAGCGCCGCCGCCAGCAGAGAATCCCTaGAAAGCAGACTTATGGAAA | + |
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Preference number: 4 (lower is better) Translates to: THVHALRICLFPATPAPPPAENP*KADLWK Trigger: TTTCCATAAGTCTGCTTTTCAGGGATTCTCTGCTGG...CGGCGGCGCTGGGGTTGCAGGGAAAAGACAAATCCTCAAAGCGTGGACGTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398073.7 |
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| CDS GCA 90 bp | TGGGTACCTTCACCAGTTACACAGCAGCAAGGAGCTCTCAACCCCTaGAGCCCAGCCTCCTGGGCTACCTGGCTGGAAGCCTGCGGCCCC | + |
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Preference number: 5 (lower is better) Translates to: WVPSPVTQQQGALNP*SPASWATWLEACGP Trigger: GGGGCCGCAGGCTTCCAGCCAGGTAGCCCAGGAGGCTGGGCTGCAGGGGTTGAGAGCTCCTTGCTGCTGTGTAACTGGTGAAGGTACCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547169.5 |
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| CDS-3UTR CAA 90 bp | ACACACGTCCACGCTTTGAGGATTTGTCTTTTCCCTGCAACCCCAGCGCCGCCGTGGGATGGCCGTCGCTaGGAAGCAGGGCAGGCTAAG | + |
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Preference number: 5 (lower is better) Translates to: THVHALRICLFPATPAPPWDGRR*EAGQAK Trigger: CTTAGCCTGCCCTGCTTCCAAGCGACGGCCATCCCA...CGGCGGCGCTGGGGTTGCAGGGAAAAGACAAATCCTCAAAGCGTGGACGTGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398073.7 |
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| CDS-3UTR CAA 90 bp | ACACACGTCCACGCTTTGAGGATTTGTCTTTTCCCTGCAACCCCAGCGCCGCCGACAGGGTCGGCATACTaGGCCAGGCTGGCAGTGAAG | + |
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Preference number: 5 (lower is better) Translates to: THVHALRICLFPATPAPPTGSAY*ARLAVK Trigger: CTTCACTGCCAGCCTGGCCAAGTATGCCGACCCTGT...CGGCGGCGCTGGGGTTGCAGGGAAAAGACAAATCCTCAAAGCGTGGACGTGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398073.7 |
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| CDS-3UTR CAA 90 bp | ACACACGTCCACGCTTTGAGGATTTGTCTTTTCCCTGCAACCCCAGCGCCGCCGTCCGGGCTCCTCAGTTaGGGTCCAACATGGAGAATC | + |
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Preference number: 5 (lower is better) Translates to: THVHALRICLFPATPAPPSGLLS*GPTWRI Trigger: GATTCTCCATGTTGGACCCAAACTGAGGAGCCCGGA...CGGCGGCGCTGGGGTTGCAGGGAAAAGACAAATCCTCAAAGCGTGGACGTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398073.7 |
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| CDS-3UTR CAA 90 bp | ACACACGTCCACGCTTTGAGGATTTGTCTTTTCCCTGCAACCCCAGCGCCGCCGCCACGCTTTGAGGATTaGTCTTTTCCCTGCAACCCC | + |
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Preference number: 5 (lower is better) Translates to: THVHALRICLFPATPAPPPRFED*SFPCNP Trigger: GGGGTTGCAGGGAAAAGACAAATCCTCAAAGCGTGG...CGGCGGCGCTGGGGTTGCAGGGAAAAGACAAATCCTCAAAGCGTGGACGTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000398073.7 |
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| CDS-3UTR CAA 90 bp | ACACACGTCCACGCTTTGAGGATTTGTCTTTTCCCTGCAACCCCAGCGCCGCCGTTGGAACAGAAGTCCTaGCACCAGCACCAGCAGAGA | + |
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Preference number: 5 (lower is better) Translates to: THVHALRICLFPATPAPPLEQKS*HQHQQR Trigger: TCTCTGCTGGTGCTGGTGCAAGGACTTCTGTTCCAA...CGGCGGCGCTGGGGTTGCAGGGAAAAGACAAATCCTCAAAGCGTGGACGTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000398073.7 |
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| CDS-3UTR CAA 90 bp | ACACACGTCCACGCTTTGAGGATTTGTCTTTTCCCTGCAACCCCAGCGCCGCCGCAGCAGAAAAGGGCCTaGAAGATGTTACGTCCACGA | + |
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Preference number: 5 (lower is better) Translates to: THVHALRICLFPATPAPPQQKRA*KMLRPR Trigger: TCGTGGACGTAACATCTTCAAGGCCCTTTTCTGCTG...CGGCGGCGCTGGGGTTGCAGGGAAAAGACAAATCCTCAAAGCGTGGACGTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000398073.7 |
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| CDS GCA 90 bp | GGAAGAGCAGAGCAGCCTGTTGGAGGCATCCCTGTGATGAAGGTTTaGAGTACTGGGTACCTTCACCAGTTACACAGCAGCAAGGAGCTC | + |
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Preference number: 5 (lower is better) Translates to: GRAEQPVGGIPVMKV*STGYLHQLHSSKEL Trigger: GAGCTCCTTGCTGCTGTGTAACTGGTGAAGGTACCCAGTACTGCAAACCTTCATCACAGGGATGCCTCCAACAGGCTGCTCTGCTCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547169.5 |
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| CDS CCA 90 bp | AGAGCAGCCTGTTGGAGGCATCCCTGTGATGAAGGTTTGCAGTACTaGGTACCTTCACCAGTTACACAGCAGCAAGGAGCTCTCAACCCC | + |
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Preference number: 5 (lower is better) Translates to: RAACWRHPCDEGLQY*VPSPVTQQQGALNP Trigger: GGGGTTGAGAGCTCCTTGCTGCTGTGTAACTGGTGAAGGTACCCAGTACTGCAAACCTTCATCACAGGGATGCCTCCAACAGGCTGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547169.5 |
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| CDS-3UTR CAA 90 bp | ACACACGTCCACGCTTTGAGGATTTGTCTTTTCCCTGCAACCCCAGCGCCGCCGACACACGTCCACGCTTaGAGGATTTGTCTTTTCCCT | + |
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Preference number: 5 (lower is better) Translates to: THVHALRICLFPATPAPPTHVHA*RICLFP Trigger: AGGGAAAAGACAAATCCTCAAAGCGTGGACGTGTGT...CGGCGGCGCTGGGGTTGCAGGGAAAAGACAAATCCTCAAAGCGTGGACGTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000398073.7 |
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| CDS GCA 90 bp | CAGGCAGGTCCCTGGGATCTAAAACCAAGCCAGGTTGCTGAGATCTaGCTACCAAGAAAGCCCAATTGTACCCCTTGGCATAATTATGGG | + |
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Preference number: 5 (lower is better) Translates to: QAGPWDLKPSQVAEI*LPRKPNCTPWHNYG Trigger: CCCATAATTATGCCAAGGGGTACAATTGGGCTTTCTTGGTAGGCAGATCTCAGCAACCTGGCTTGGTTTTAGATCCCAGGGACCTGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000552294.1 |
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| CDS CCA 90 bp | CAGGTTGCTGAGATCTGCCTACCAAGAAAGCCCAATTGTACCCCTTaGCATAATTATGGGAAGAGCTGGGTTGTTTGTGGAGACACAATC | + |
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Preference number: 5 (lower is better) Translates to: QVAEICLPRKPNCTP*HNYGKSWVVCGDTI Trigger: GATTGTGTCTCCACAAACAACCCAGCTCTTCCCATAATTATGCCAAGGGGTACAATTGGGCTTTCTTGGTAGGCAGATCTCAGCAACCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552294.1 |
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| CDS TCA 72 bp | CCTCCTGGGCTACCTGGCTGGAAGCCTGCGGCCCCCTaGGACCCCACAGACCCGGAGAACTGGCTGTACCCC | + |
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Preference number: 6 (lower is better) Translates to: PPGLPGWKPAAP*DPTDPENWLYP Trigger: GGGGTACAGCCAGTTCTCCGGGTCTGTGGGGTCTCAGGGGGCCGCAGGCTTCCAGCCAGGTAGCCCAGGAGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000547169.5 |
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| CDS TCA 72 bp | TTTCCTTGGTTTCAGCCTCCCAGTGGGACTATTAAGTaGTCTGGACATTGGAGGTGGTGGCCAGGGCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: FPWFQPPSGTIK*SGHWRWWPGQV Trigger: CACCTGCCCTGGCCACCACCTCCAATGTCCAGATCACTTAATAGTCCCACTGGGAGGCTGAAACCAAGGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000552294.1 |
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| CDS TCA 72 bp | GGCAGGTCCCTGGGATCTAAAACCAAGCCAGGTTGCTaGGATCTGCCTACCAAGAAAGCCCAATTGTACCCC | + |
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Preference number: 6 (lower is better) Translates to: GRSLGSKTKPGC*DLPTKKAQLYP Trigger: GGGGTACAATTGGGCTTTCTTGGTAGGCAGATCTCAGCAACCTGGCTTGGTTTTAGATCCCAGGGACCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552294.1 |
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| CDS GCA 72 bp | GAGCAGCCTGTTGGAGGCATCCCTGTGATGAAGGTTTaGAGTACTGGGTACCTTCACCAGTTACACAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: EQPVGGIPVMKV*STGYLHQLHSS Trigger: GCTGCTGTGTAACTGGTGAAGGTACCCAGTACTGCAAACCTTCATCACAGGGATGCCTCCAACAGGCTGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547169.5 |
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| CDS CAA 90 bp | AGGAAGAGCAGAGCAGCCTGTTGGAGGCATCCCTGTGATGAAGGTTaGCAGTACTGGGTACCTTCACCAGTTACACAGCAGCAAGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: RKSRAACWRHPCDEG*QYWVPSPVTQQQGA Trigger: AGCTCCTTGCTGCTGTGTAACTGGTGAAGGTACCCAGTACTGCAAACCTTCATCACAGGGATGCCTCCAACAGGCTGCTCTGCTCTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547169.5 |
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| CDS CAA 72 bp | AGAGCAGCCTGTTGGAGGCATCCCTGTGATGAAGGTTaGCAGTACTGGGTACCTTCACCAGTTACACAGCAG | + |
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Preference number: 6 (lower is better) Translates to: RAACWRHPCDEG*QYWVPSPVTQQ Trigger: CTGCTGTGTAACTGGTGAAGGTACCCAGTACTGCAAACCTTCATCACAGGGATGCCTCCAACAGGCTGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547169.5 |
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| CDS CCA 72 bp | CCCAATTGTACCCCTTGGCATAATTATGGGAAGAGCTaGGTTGTTTGTGGAGACACAATCACCAACCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: PNCTPWHNYGKS*VVCGDTITNPG Trigger: TCCTGGGTTGGTGATTGTGTCTCCACAAACAACCCAGCTCTTCCCATAATTATGCCAAGGGGTACAATTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552294.1 |
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| CDS CAA 90 bp | GAAAGCCCAATTGTACCCCTTGGCATAATTATGGGAAGAGCTGGGTaGTTTGTGGAGACACAATCACCAACCCAGGATAGGCACCACTTA | + |
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Preference number: 6 (lower is better) Translates to: ESPIVPLGIIMGRAG*FVETQSPTQDRHHL Trigger: TAAGTGGTGCCTATCCTGGGTTGGTGATTGTGTCTCCACAAACAACCCAGCTCTTCCCATAATTATGCCAAGGGGTACAATTGGGCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552294.1 |
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| CDS CCA 72 bp | GAGATCTGCCTACCAAGAAAGCCCAATTGTACCCCTTaGCATAATTATGGGAAGAGCTGGGTTGTTTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: EICLPRKPNCTP*HNYGKSWVVCG Trigger: TCCACAAACAACCCAGCTCTTCCCATAATTATGCCAAGGGGTACAATTGGGCTTTCTTGGTAGGCAGATCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552294.1 |
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| CDS CAA 72 bp | ATTGTACCCCTTGGCATAATTATGGGAAGAGCTGGGTaGTTTGTGGAGACACAATCACCAACCCAGGATAGG | + |
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Preference number: 6 (lower is better) Translates to: IVPLGIIMGRAG*FVETQSPTQDR Trigger: CCTATCCTGGGTTGGTGATTGTGTCTCCACAAACAACCCAGCTCTTCCCATAATTATGCCAAGGGGTACAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000552294.1 |
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