RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CTDP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000060069

Ensembl transcript IDs: ENST00000075430.11, ENST00000299543.8, ENST00000299543.9, ENST00000585951.1, ENST00000587623.1, ENST00000590599.2, ENST00000590635.5, ENST00000591598.5, ENST00000613122.5, ENST00000632255.1, ENST00000632301.1, ENST00000632450.1, ENST00000632905.1, ENST00000632932.1

Found 642 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGCGTGGACCGAGACTGAGGGCTGGTCCGGGGACGTCCGAGTGCTaGTGGAGGTCGGTCAGGCTTCAGTCCCTGCCCGCTGCCCGCGCT +
Preference number: 1 (lower is better)
Translates to: QRGPRLRAGPGTSEC*WRSVRLQSLPAARA
Trigger: AGCGCGGGCAGCGGGCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACCAGCCCTCAGTCTCGGTCCACGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
3UTR CCA 90 bp CGTGGACCGAGACTGAGGGCTGGTCCGGGGACGTCCGAGTGCTGCTaGAGGTCGGTCAGGCTTCAGTCCCTGCCCGCTGCCCGCGCTCAC +
Preference number: 1 (lower is better)
Translates to: RGPRLRAGPGTSECC*RSVRLQSLPAARAH
Trigger: GTGAGCGCGGGCAGCGGGCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACCAGCCCTCAGTCTCGGTCCACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
3UTR GCA 90 bp AAGCAGCGTGGACCGAGACTGAGGGCTGGTCCGGGGACGTCCGAGTaGTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCCCGCTGCCCGC +
Preference number: 1 (lower is better)
Translates to: KQRGPRLRAGPGTSE*CWRSVRLQSLPAAR
Trigger: GCGGGCAGCGGGCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACCAGCCCTCAGTCTCGGTCCACGCTGCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR GCA 90 bp AGGATGGCAGCCCAGGCCACGTGGCGTGGACCCTGCGTAGGAGGCTaGAGGAAGCTCCAGGCTGCCCGACAGTCACGGCGTTCCCCGGAA +
Preference number: 1 (lower is better)
Translates to: RMAAQATWRGPCVGG*RKLQAARQSRRSPE
Trigger: TTCCGGGGAACGCCGTGACTGTCGGGCAGCCTGGAGCTTCCTGCAGCCTCCTACGCAGGGTCCACGCCACGTGGCCTGGGCTGCCATCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR CCA 90 bp ATGCCAGTGGGAGGACGGCAGGATGGCAGCCCAGGCCACGTGGCGTaGACCCTGCGTAGGAGGCTGCAGGAAGCTCCAGGCTGCCCGACA +
Preference number: 1 (lower is better)
Translates to: MPVGGRQDGSPGHVA*TLRRRLQEAPGCPT
Trigger: TGTCGGGCAGCCTGGAGCTTCCTGCAGCCTCCTACGCAGGGTCCACGCCACGTGGCCTGGGCTGCCATCCTGCCGTCCTCCCACTGGCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR GCA 90 bp GTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCCCGCTaGCCGCGCTCACATGAGGTCGTTGAGCTCCGCCTCCAGCGCCTT +
Preference number: 1 (lower is better)
Translates to: VRVLLEVGQASVPAR*PRSHEVVELRLQRL
Trigger: AAGGCGCTGGAGGCGGAGCTCAACGACCTCATGTGAGCGCGGGCAGCGGGCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
3UTR GCA 90 bp CACGTGGCGTGGACCCTGCGTAGGAGGCTGCAGGAAGCTCCAGGCTaGCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGG +
Preference number: 1 (lower is better)
Translates to: HVAWTLRRRLQEAPG*PTVTAFPGNGFPRR
Trigger: CCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTGGAGCTTCCTGCAGCCTCCTACGCAGGGTCCACGCCACGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR GCA 90 bp TCCCTAGGAGGGAGCAGCAGGCGGCGGGGGTTCCAGGCATGTCTGTaGTGGGCTCGGAGCTCGTGCACGCACACTGTCCTGCTTAAACTC +
Preference number: 1 (lower is better)
Translates to: SLGGSSRRRGFQACL*WARSSCTHTVLLKL
Trigger: GAGTTTAAGCAGGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCGCCTGCTGCTCCCTCCTAGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR CCA 90 bp CTAGGAGGGAGCAGCAGGCGGCGGGGGTTCCAGGCATGTCTGTGCTaGGCTCGGAGCTCGTGCACGCACACTGTCCTGCTTAAACTCCTA +
Preference number: 1 (lower is better)
Translates to: LGGSSRRRGFQACLC*ARSSCTHTVLLKLL
Trigger: TAGGAGTTTAAGCAGGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCGCCTGCTGCTCCCTCCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR GCA 90 bp AGGCGGCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTaGACGCACACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGTGG +
Preference number: 1 (lower is better)
Translates to: RRRGFQACLCWARSS*THTVLLKLLVHVSW
Trigger: CCACGAGACATGGACTAGGAGTTTAAGCAGGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR CCA 90 bp TACATGTCCTTTGGGAAGAAAGCAGCGTGGACCGAGACTGAGGGCTaGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCA +
Preference number: 1 (lower is better)
Translates to: YMSFGKKAAWTETEG*SGDVRVLLEVGQAS
Trigger: TGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACCAGCCCTCAGTCTCGGTCCACGCTGCTTTCTTCCCAAAGGACATGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR TCA 90 bp GCAAATATACATGTCCTTTGGGAAGAAAGCAGCGTGGACCGAGACTaGGGGCTGGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCA +
Preference number: 1 (lower is better)
Translates to: ANIHVLWEESSVDRD*GLVRGRPSAAGGRS
Trigger: TGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACCAGCCCTCAGTCTCGGTCCACGCTGCTTTCTTCCCAAAGGACATGTATATTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR CCA 90 bp TGTGGAGCTCTGCAAATATACATGTCCTTTGGGAAGAAAGCAGCGTaGACCGAGACTGAGGGCTGGTCCGGGGACGTCCGAGTGCTGCTG +
Preference number: 1 (lower is better)
Translates to: CGALQIYMSFGKKAA*TETEGWSGDVRVLL
Trigger: CAGCAGCACTCGGACGTCCCCGGACCAGCCCTCAGTCTCGGTCCACGCTGCTTTCTTCCCAAAGGACATGTATATTTGCAGAGCTCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR CCA 90 bp TCGTGCACGCACACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGTaGGACCCCCAAAGCCGTCCCCTAAGGAATGTGCTCTGGTACACA +
Preference number: 1 (lower is better)
Translates to: SCTHTVLLKLLVHVS*DPQSRPLRNVLWYT
Trigger: TGTGTACCAGAGCACATTCCTTAGGGGACGGCTTTGGGGGTCCCACGAGACATGGACTAGGAGTTTAAGCAGGACAGTGTGCGTGCACGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR-3UTR GCA 90 bp CACCAACCCGCCCCTTACCGAGACAGCGGGCGCACCAGCCTGGGCCACGTGAGCCCGGGGACGTCCGAGTaGTGCTGGAGGTCGGTCAGG +
Preference number: 2 (lower is better)
Translates to: HQPAPYRDSGRTSLGHVSPGTSE*CWRSVR
Trigger: CCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGG...GCTCACGTGGCCCAGGCTGGTGCGCCCGCTGTCTCGGTAAGGGGCGGGTTGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR-3UTR CCA 90 bp TGGGAGGACGGCAGGATGGCAGCCCAGGCCACGTGGCGTGGACCCTGCGTAGGACCGCCTCCAGCGCCTTaGCCATCTCGTCGGCCTCGG +
Preference number: 2 (lower is better)
Translates to: WEDGRMAAQATWRGPCVGPPPAP*PSRRPR
Trigger: CCGAGGCCGACGAGATGGCCAAGGCGCTGGAGGCGG...TCCTACGCAGGGTCCACGCCACGTGGCCTGGGCTGCCATCCTGCCGTCCTCCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
3UTR-3UTR TCA 90 bp TGGGAGGACGGCAGGATGGCAGCCCAGGCCACGTGGCGTGGACCCTGCGTAGGAAGCGTGGACCGAGACTaGGGGCTGGTCCGGGGACGT +
Preference number: 2 (lower is better)
Translates to: WEDGRMAAQATWRGPCVGSVDRD*GLVRGR
Trigger: ACGTCCCCGGACCAGCCCTCAGTCTCGGTCCACGCT...TCCTACGCAGGGTCCACGCCACGTGGCCTGGGCTGCCATCCTGCCGTCCTCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR CAA 90 bp GTCAGGCTTCAGTCCCTGCCCGCTGCCCGCGCTCACATGAGGTCGTaGAGCTCCGCCTCCAGCGCCTTGGCCATCTCGTCGGCCTCGGAG +
Preference number: 2 (lower is better)
Translates to: VRLQSLPAARAHMRS*SSASSALAISSASE
Trigger: CTCCGAGGCCGACGAGATGGCCAAGGCGCTGGAGGCGGAGCTCAACGACCTCATGTGAGCGCGGGCAGCGGGCAGGGACTGAAGCCTGAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
3UTR-3UTR GCA 90 bp GCCCAGGCCACGTGGCGTGGACCCTGCGTAGGAGGCTGCAGGAAGCTCCAGGCTCGTTGCTGGACTCCCTaGTGGACTCGCTGGCGGCGT +
Preference number: 2 (lower is better)
Translates to: AQATWRGPCVGGCRKLQARCWTP*WTRWRR
Trigger: ACGCCGCCAGCGAGTCCAGCAGGGAGTCCAGCAACG...AGCCTGGAGCTTCCTGCAGCCTCCTACGCAGGGTCCACGCCACGTGGCCTGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
3UTR-3UTR GCA 90 bp TCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGGCGGCGGGGGTCAGTCCCTGCCCGCTaGCCGCGCTCACATGAGGTC +
Preference number: 2 (lower is better)
Translates to: SRRSPEMGSLGGSSRRRGSVPAR*PRSHEV
Trigger: GACCTCATGTGAGCGCGGGCAGCGGGCAGGGACTGA...CCCCCGCCGCCTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
3UTR-3UTR GCA 90 bp GGCGGCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACATCAGGCTTCAGTCCCTaGCCGCTGCCCGCGCTCACA +
Preference number: 2 (lower is better)
Translates to: GGGGSRHVCAGLGARARTSGFSP*PLPALT
Trigger: TGTGAGCGCGGGCAGCGGGCAGGGACTGAAGCCTGA...TGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
3UTR-3UTR CCA 90 bp GCTCCAGGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGCCGCCTCCAGCGCCTTaGCCATCTCGTCGGCCTCGG +
Preference number: 2 (lower is better)
Translates to: APGCPTVTAFPGNGFPRRPPPAP*PSRRPR
Trigger: CCGAGGCCGACGAGATGGCCAAGGCGCTGGAGGCGG...CCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
3UTR-3UTR GCA 90 bp AGGATGGCAGCCCAGGCCACGTGGCGTGGACCCTGCGTAGGAGGCTGCAGGAAGCGGCCTCGGAGCTGCTaGCCTCATCCTCGTTGCTGG +
Preference number: 2 (lower is better)
Translates to: RMAAQATWRGPCVGGCRKRPRSC*PHPRCW
Trigger: CCAGCAACGAGGATGAGGGCAGCAGCTCCGAGGCCG...CTTCCTGCAGCCTCCTACGCAGGGTCCACGCCACGTGGCCTGGGCTGCCATCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
3UTR-3UTR TCA 90 bp GGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTCCTGAGCGTGGACCGAGACTaGGGGCTGGTCCGGGGACGT +
Preference number: 2 (lower is better)
Translates to: GFQACLCWARSSCTHTVLSVDRD*GLVRGR
Trigger: ACGTCCCCGGACCAGCCCTCAGTCTCGGTCCACGCT...CAGGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR-3UTR TCA 90 bp TGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGAGCGTGGACCGAGACTaGGGGCTGGTCCGGGGACGT +
Preference number: 2 (lower is better)
Translates to: CPTVTAFPGNGFPRREQQSVDRD*GLVRGR
Trigger: ACGTCCCCGGACCAGCCCTCAGTCTCGGTCCACGCT...CTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR-3UTR GCA 90 bp GGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTCCCGTTGCTGGACTCCCTaGTGGACTCGCTGGCGGCGT +
Preference number: 2 (lower is better)
Translates to: GGSRHVCAGLGARARTLSRCWTP*WTRWRR
Trigger: ACGCCGCCAGCGAGTCCAGCAGGGAGTCCAGCAACG...GGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
3UTR-3UTR GCA 90 bp GCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTTCAGTCCCTGCCCGCTaGCCGCGCTCACATGAGGTC +
Preference number: 2 (lower is better)
Translates to: AGVPGMSVLGSELVHAHCSVPAR*PRSHEV
Trigger: GACCTCATGTGAGCGCGGGCAGCGGGCAGGGACTGA...ACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
3UTR-3UTR GCA 90 bp GCCGCCCAGGAAAAGCAACGCCCCCTTGCCAGGATGCCAGTGGGAGGACGGCAGGGGACGTCCGAGTGCTaGTGGAGGTCGGTCAGGCTT +
Preference number: 2 (lower is better)
Translates to: AAQEKQRPLARMPVGGRQGTSEC*WRSVRL
Trigger: AAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCC...CTGCCGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGGGCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR-3UTR GCA 90 bp TCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGGCGGCGGGGGTGGGCTCGGAGCTCGTaGACGCACACTGTCCTGCTT +
Preference number: 2 (lower is better)
Translates to: SRRSPEMGSLGGSSRRRGWARSS*THTVLL
Trigger: AAGCAGGACAGTGTGCGTGCACGAGCTCCGAGCCCA...CCCCCGCCGCCTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR-3UTR GCA 90 bp ATGCCAGTGGGAGGACGGCAGGATGGCAGCCCAGGCCACGTGGCGTGGACCCTGTTCCAGGCATGTCTGTaGTGGGCTCGGAGCTCGTGC +
Preference number: 2 (lower is better)
Translates to: MPVGGRQDGSPGHVAWTLFQACL*WARSSC
Trigger: GCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAA...CAGGGTCCACGCCACGTGGCCTGGGCTGCCATCCTGCCGTCCTCCCACTGGCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR-3UTR CCA 90 bp CTCCAGGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGTGCTGGACTCCCTGCTaGACTCGCTGGCGGCGTCCT +
Preference number: 2 (lower is better)
Translates to: LQAARQSRRSPEMGSLGGCWTPC*TRWRRP
Trigger: AGGACGCCGCCAGCGAGTCCAGCAGGGAGTCCAGCA...CCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
3UTR-3UTR CCA 90 bp AAAACACACCAACCCGCCCCTTACCGAGACAGCGGGCGCACCAGCCTGGGCCACACCGAGACTGAGGGCTaGTCCGGGGACGTCCGAGTG +
Preference number: 2 (lower is better)
Translates to: KTHQPAPYRDSGRTSLGHTETEG*SGDVRV
Trigger: CACTCGGACGTCCCCGGACCAGCCCTCAGTCTCGGT...GTGGCCCAGGCTGGTGCGCCCGCTGTCTCGGTAAGGGGCGGGTTGGTGTGTTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR-3UTR CCA 90 bp ACACCAACCCGCCCCTTACCGAGACAGCGGGCGCACCAGCCTGGGCCACGTGAGGGGAAGAAAGCAGCGTaGACCGAGACTGAGGGCTGG +
Preference number: 2 (lower is better)
Translates to: TPTRPLPRQRAHQPGPREGKKAA*TETEGW
Trigger: CCAGCCCTCAGTCTCGGTCCACGCTGCTTTCTTCCC...CTCACGTGGCCCAGGCTGGTGCGCCCGCTGTCTCGGTAAGGGGCGGGTTGGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR-3UTR CCA 90 bp TCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGGCGGCGGGGGGGGAAGAAAGCAGCGTaGACCGAGACTGAGGGCTGG +
Preference number: 2 (lower is better)
Translates to: SRRSPEMGSLGGSSRRRGGKKAA*TETEGW
Trigger: CCAGCCCTCAGTCTCGGTCCACGCTGCTTTCTTCCC...CCCCCGCCGCCTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGA
67% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR-3UTR CCA 90 bp TGGGAGGACGGCAGGATGGCAGCCCAGGCCACGTGGCGTGGACCCTGCGTAGGACTAGTCCATGTCTCGTaGGACCCCCAAAGCCGTCCC +
Preference number: 2 (lower is better)
Translates to: WEDGRMAAQATWRGPCVGLVHVS*DPQSRP
Trigger: GGGACGGCTTTGGGGGTCCCACGAGACATGGACTAG...TCCTACGCAGGGTCCACGCCACGTGGCCTGGGCTGCCATCCTGCCGTCCTCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR-3UTR TCA 90 bp ACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGGCGGCGCCAGCCTGGGCCACGTaGGCCTCTGCTGAGCTCTTT +
Preference number: 2 (lower is better)
Translates to: TVTAFPGNGFPRREQQAAPAWAT*ASAELF
Trigger: AAAGAGCTCAGCAGAGGCTCACGTGGCCCAGGCTGG...CGCCGCCTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR-3UTR GCA 90 bp CCAGGAAAAGCAACGCCCCCTTGCCAGGATGCCAGTGGGAGGACGGCAGGATGGTCAGGCTTCAGTCCCTaGCCGCTGCCCGCGCTCACA +
Preference number: 2 (lower is better)
Translates to: PGKATPPCQDASGRTAGWSGFSP*PLPALT
Trigger: TGTGAGCGCGGGCAGCGGGCAGGGACTGAAGCCTGA...CCATCCTGCCGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
3UTR-3UTR GCA 90 bp GCCGCCCAGGAAAAGCAACGCCCCCTTGCCAGGATGCCAGTGGGAGGACGGCAGTGGGCTCGGAGCTCGTaGACGCACACTGTCCTGCTT +
Preference number: 2 (lower is better)
Translates to: AAQEKQRPLARMPVGGRQWARSS*THTVLL
Trigger: AAGCAGGACAGTGTGCGTGCACGAGCTCCGAGCCCA...CTGCCGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGGGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR-3UTR GCA 90 bp GCCGCCCAGGAAAAGCAACGCCCCCTTGCCAGGATGCCAGTGGGAGGACGGCAGTTCCAGGCATGTCTGTaGTGGGCTCGGAGCTCGTGC +
Preference number: 2 (lower is better)
Translates to: AAQEKQRPLARMPVGGRQFQACL*WARSSC
Trigger: GCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAA...CTGCCGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGGGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR-3UTR CCA 90 bp GCCGCCCAGGAAAAGCAACGCCCCCTTGCCAGGATGCCAGTGGGAGGACGGCAGACGTCCGAGTGCTGCTaGAGGTCGGTCAGGCTTCAG +
Preference number: 2 (lower is better)
Translates to: AAQEKQRPLARMPVGGRQTSECC*RSVRLQ
Trigger: CTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGT...CTGCCGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGGGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR-3UTR CCA 90 bp GGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGGCATGTCTGTGCTaGGCTCGGAGCTCGTGCACG +
Preference number: 2 (lower is better)
Translates to: GCPTVTAFPGNGFPRREQQACLC*ARSSCT
Trigger: CGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTG...CTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR-3UTR TCA 90 bp GGCCGCCCAGGAAAAGCAACGCCCCCTTGCCAGGATGCCAGTGGGAGGACGGCACACGTGAGCCTCTGCTaGGCTCTTTGGCACAGCACA +
Preference number: 2 (lower is better)
Translates to: GRPGKATPPCQDASGRTAHVSLC*ALWHST
Trigger: TGTGCTGTGCCAAAGAGCTCAGCAGAGGCTCACGTG...TGCCGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGGGCGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR-3UTR TCA 90 bp AAAGGCCGCCCAGGAAAAGCAACGCCCCCTTGCCAGGATGCCAGTGGGAGGACGCCAGCCTGGGCCACGTaGGCCTCTGCTGAGCTCTTT +
Preference number: 2 (lower is better)
Translates to: KGRPGKATPPCQDASGRTPAWAT*ASAELF
Trigger: AAAGAGCTCAGCAGAGGCTCACGTGGCCCAGGCTGG...CGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGGGCGGCCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR-3UTR GCA 90 bp CCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGGCGTGGGCTCGGAGCTCGTaGACGCACACTGTCCTGCTT +
Preference number: 2 (lower is better)
Translates to: PTVTAFPGNGFPRREQQAWARSS*THTVLL
Trigger: AAGCAGGACAGTGTGCGTGCACGAGCTCCGAGCCCA...CGCCTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR-3UTR CCA 90 bp GCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTACGTCCGAGTGCTGCTaGAGGTCGGTCAGGCTTCAG +
Preference number: 2 (lower is better)
Translates to: AGVPGMSVLGSELVHAHCTSECC*RSVRLQ
Trigger: CTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGT...ACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR-3UTR CCA 90 bp CGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGGCGGGGGAAGAAAGCAGCGTaGACCGAGACTGAGGGCTGG +
Preference number: 2 (lower is better)
Translates to: RQSRRSPEMGSLGGSSRRGKKAA*TETEGW
Trigger: CCAGCCCTCAGTCTCGGTCCACGCTGCTTTCTTCCC...CCGCCTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR-3UTR CCA 90 bp ACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGGCGGCGCTAGTCCATGTCTCGTaGGACCCCCAAAGCCGTCCC +
Preference number: 2 (lower is better)
Translates to: TVTAFPGNGFPRREQQAALVHVS*DPQSRP
Trigger: GGGACGGCTTTGGGGGTCCCACGAGACATGGACTAG...CGCCGCCTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR-3UTR TCA 90 bp GTCTCGTGGGACCCCCAAAGCCGTCCCCTAAGGAATGTGCTCTGGTACACAAGGAGCGTGGACCGAGACTaGGGGCTGGTCCGGGGACGT +
Preference number: 2 (lower is better)
Translates to: VSWDPQSRPLRNVLWYTRSVDRD*GLVRGR
Trigger: ACGTCCCCGGACCAGCCCTCAGTCTCGGTCCACGCT...CCTTGTGTACCAGAGCACATTCCTTAGGGGACGGCTTTGGGGGTCCCACGAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR-3UTR GCA 90 bp GGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTCCTGCCCTCATCCTCGTTaGTGGACTCCCTGCTGGACT +
Preference number: 2 (lower is better)
Translates to: GGSRHVCAGLGARARTLSCPHPR*WTPCWT
Trigger: AGTCCAGCAGGGAGTCCAGCAACGAGGATGAGGGCA...GGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
3UTR-3UTR CCA 90 bp CCAGGAAAAGCAACGCCCCCTTGCCAGGATGCCAGTGGGAGGACGGCAGGATGGGGGAAGAAAGCAGCGTaGACCGAGACTGAGGGCTGG +
Preference number: 2 (lower is better)
Translates to: PGKATPPCQDASGRTAGWGKKAA*TETEGW
Trigger: CCAGCCCTCAGTCTCGGTCCACGCTGCTTTCTTCCC...CCATCCTGCCGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR-3UTR GCA 90 bp GCTCGGAGCTCGTGCACGCACACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGCCGGGGACGTCCGAGTaGTGCTGGAGGTCGGTCAGG +
Preference number: 2 (lower is better)
Translates to: ARSSCTHTVLLKLLVHVSPGTSE*CWRSVR
Trigger: CCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGG...CGAGACATGGACTAGGAGTTTAAGCAGGACAGTGTGCGTGCACGAGCTCCGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR-3UTR GCA 90 bp CATGTCTCGTGGGACCCCCAAAGCCGTCCCCTAAGGAATGTGCTCTGGTACACACCGGGGACGTCCGAGTaGTGCTGGAGGTCGGTCAGG +
Preference number: 2 (lower is better)
Translates to: HVSWDPQSRPLRNVLWYTPGTSE*CWRSVR
Trigger: CCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGG...TGTGTACCAGAGCACATTCCTTAGGGGACGGCTTTGGGGGTCCCACGAGACATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR-3UTR CCA 90 bp AGGCCGCCCAGGAAAAGCAACGCCCCCTTGCCAGGATGCCAGTGGGAGGACGGCTTGGCACAGCACACCTaGGCCTTTAACACCTGTCAC +
Preference number: 2 (lower is better)
Translates to: RPPRKSNAPLPGCQWEDGLAQHT*AFNTCH
Trigger: GTGACAGGTGTTAAAGGCCCAGGTGTGCTGTGCCAA...GCCGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGGGCGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR-3UTR GCA 90 bp CACACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGTGGGACCCCCAAAGCCGTCCGGGGACGTCCGAGTaGTGCTGGAGGTCGGTCAGG +
Preference number: 2 (lower is better)
Translates to: HTVLLKLLVHVSWDPQSRPGTSE*CWRSVR
Trigger: CCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGG...ACGGCTTTGGGGGTCCCACGAGACATGGACTAGGAGTTTAAGCAGGACAGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR-3UTR CCA 90 bp GCTCGGAGCTCGTGCACGCACACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGACCGAGACTGAGGGCTaGTCCGGGGACGTCCGAGTG +
Preference number: 2 (lower is better)
Translates to: ARSSCTHTVLLKLLVHVSTETEG*SGDVRV
Trigger: CACTCGGACGTCCCCGGACCAGCCCTCAGTCTCGGT...CGAGACATGGACTAGGAGTTTAAGCAGGACAGTGTGCGTGCACGAGCTCCGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR CAA 90 bp CAGCGGGCGCACCAGCCTGGGCCACGTGAGCCTCTGCTGAGCTCTTaGGCACAGCACACCTGGGCCTTTAACACCTGTCACTTACAAAAG +
Preference number: 2 (lower is better)
Translates to: QRAHQPGPREPLLSS*AQHTWAFNTCHLQK
Trigger: CTTTTGTAAGTGACAGGTGTTAAAGGCCCAGGTGTGCTGTGCCAAAGAGCTCAGCAGAGGCTCACGTGGCCCAGGCTGGTGCGCCCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR-3UTR CCA 90 bp GCCGCCCAGGAAAAGCAACGCCCCCTTGCCAGGATGCCAGTGGGAGGACGGCAGCTAAGGAATGTGCTCTaGTACACAAGGGGAAAACAC +
Preference number: 2 (lower is better)
Translates to: AAQEKQRPLARMPVGGRQLRNVL*YTRGKH
Trigger: GTGTTTTCCCCTTGTGTACCAGAGCACATTCCTTAG...CTGCCGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGGGCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR-3UTR GCA 90 bp GTCCTGCTTAAACTCCTAGTCCATGTCTCGTGGGACCCCCAAAGCCGTCCCCTATGCCCTCATCCTCGTTaGTGGACTCCCTGCTGGACT +
Preference number: 2 (lower is better)
Translates to: VLLKLLVHVSWDPQSRPLCPHPR*WTPCWT
Trigger: AGTCCAGCAGGGAGTCCAGCAACGAGGATGAGGGCA...TAGGGGACGGCTTTGGGGGTCCCACGAGACATGGACTAGGAGTTTAAGCAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
3UTR-3UTR CCA 90 bp GGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCTAAGGAATGTGCTCTaGTACACAAGGGGAAAACAC +
Preference number: 2 (lower is better)
Translates to: GCPTVTAFPGNGFPRREQLRNVL*YTRGKH
Trigger: GTGTTTTCCCCTTGTGTACCAGAGCACATTCCTTAG...CTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR-3UTR CCA 90 bp GCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTCCTGCTTAAACTCTTGGCACAGCACACCTaGGCCTTTAACACCTGTCAC +
Preference number: 2 (lower is better)
Translates to: ACLCWARSSCTHTVLLKLLAQHT*AFNTCH
Trigger: GTGACAGGTGTTAAAGGCCCAGGTGTGCTGTGCCAA...GAGTTTAAGCAGGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR-3UTR CCA 90 bp AGGATGGCAGCCCAGGCCACGTGGCGTGGACCCTGCGTAGGAGGCTGCAGGAAGATGTGTTTCTGTATGTaGAGCTCTGCAAATATACAT +
Preference number: 2 (lower is better)
Translates to: RMAAQATWRGPCVGGCRKMCFCM*SSANIH
Trigger: ATGTATATTTGCAGAGCTCCACATACAGAAACACAT...CTTCCTGCAGCCTCCTACGCAGGGTCCACGCCACGTGGCCTGGGCTGCCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR-3UTR CCA 90 bp GGCCGCCCAGGAAAAGCAACGCCCCCTTGCCAGGATGCCAGTGGGAGGACGGCAATGTGTTTCTGTATGTaGAGCTCTGCAAATATACAT +
Preference number: 2 (lower is better)
Translates to: GRPGKATPPCQDASGRTAMCFCM*SSANIH
Trigger: ATGTATATTTGCAGAGCTCCACATACAGAAACACAT...TGCCGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGGGCGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR-3UTR CCA 90 bp CCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGGCGATGTGTTTCTGTATGTaGAGCTCTGCAAATATACAT +
Preference number: 2 (lower is better)
Translates to: PTVTAFPGNGFPRREQQAMCFCM*SSANIH
Trigger: ATGTATATTTGCAGAGCTCCACATACAGAAACACAT...CGCCTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR-3UTR CCA 90 bp ACGCACACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGTGGGACCCCCAAAGCCTAAGGAATGTGCTCTaGTACACAAGGGGAAAACAC +
Preference number: 2 (lower is better)
Translates to: THTVLLKLLVHVSWDPQSLRNVL*YTRGKH
Trigger: GTGTTTTCCCCTTGTGTACCAGAGCACATTCCTTAG...GCTTTGGGGGTCCCACGAGACATGGACTAGGAGTTTAAGCAGGACAGTGTGCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR CCA 72 bp GGAGGACGGCAGGATGGCAGCCCAGGCCACGTGGCGTaGACCCTGCGTAGGAGGCTGCAGGAAGCTCCAGGC +
Preference number: 3 (lower is better)
Translates to: GGRQDGSPGHVA*TLRRRLQEAPG
Trigger: GCCTGGAGCTTCCTGCAGCCTCCTACGCAGGGTCCACGCCACGTGGCCTGGGCTGCCATCCTGCCGTCCTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR-3UTR CAA 90 bp ACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCCCGCTGCCCGCGCTCACATGAGGTCGTaGAGCTCCGCCTCCAGCGCC +
Preference number: 3 (lower is better)
Translates to: TSECCWRSVRLQSLPAARAHMRS*SSASSA
Trigger: GGCGCTGGAGGCGGAGCTCAACGACCTCATGTGAGC...GCGGGCAGCGGGCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
3UTR GCA 72 bp CCGAGACTGAGGGCTGGTCCGGGGACGTCCGAGTGCTaGTGGAGGTCGGTCAGGCTTCAGTCCCTGCCCGCT +
Preference number: 3 (lower is better)
Translates to: PRLRAGPGTSEC*WRSVRLQSLPA
Trigger: AGCGGGCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACCAGCCCTCAGTCTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR GCA 72 bp GGACCGAGACTGAGGGCTGGTCCGGGGACGTCCGAGTaGTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCCC +
Preference number: 3 (lower is better)
Translates to: GPRLRAGPGTSE*CWRSVRLQSLP
Trigger: GGGCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACCAGCCCTCAGTCTCGGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR GCA 72 bp GGGAGCAGCAGGCGGCGGGGGTTCCAGGCATGTCTGTaGTGGGCTCGGAGCTCGTGCACGCACACTGTCCTG +
Preference number: 3 (lower is better)
Translates to: GSSRRRGFQACL*WARSSCTHTVL
Trigger: CAGGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCGCCTGCTGCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR GCA 72 bp AGGCCGCCCAGGAAAAGCAACGCCCCCTTGCCAGGATaGCAGTGGGAGGACGGCAGGATGGCAGCCCAGGCC +
Preference number: 3 (lower is better)
Translates to: RPPRKSNAPLPG*QWEDGRMAAQA
Trigger: GGCCTGGGCTGCCATCCTGCCGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGGGCGGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR CCA 72 bp AGACTGAGGGCTGGTCCGGGGACGTCCGAGTGCTGCTaGAGGTCGGTCAGGCTTCAGTCCCTGCCCGCTGCC +
Preference number: 3 (lower is better)
Translates to: RLRAGPGTSECC*RSVRLQSLPAA
Trigger: GGCAGCGGGCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACCAGCCCTCAGTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR CCA 72 bp CAGTGGGAGGACGGCAGGATGGCAGCCCAGGCCACGTaGCGTGGACCCTGCGTAGGAGGCTGCAGGAAGCTC +
Preference number: 3 (lower is better)
Translates to: QWEDGRMAAQAT*RGPCVGGCRKL
Trigger: GAGCTTCCTGCAGCCTCCTACGCAGGGTCCACGCCACGTGGCCTGGGCTGCCATCCTGCCGTCCTCCCACTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR GCA 72 bp CCTCCAGCGCCTTGGCCATCTCGTCGGCCTCGGAGCTaGTGCCCTCATCCTCGTTGCTGGACTCCCTGCTGG +
Preference number: 3 (lower is better)
Translates to: PPAPWPSRRPRS*CPHPRCWTPCW
Trigger: CCAGCAGGGAGTCCAGCAACGAGGATGAGGGCAGCAGCTCCGAGGCCGACGAGATGGCCAAGGCGCTGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
3UTR GCA 72 bp CTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCCCGCTaGCCGCGCTCACATGAGGTCGTTGAGCTCCGCCTC +
Preference number: 3 (lower is better)
Translates to: LLEVGQASVPAR*PRSHEVVELRL
Trigger: GAGGCGGAGCTCAACGACCTCATGTGAGCGCGGGCAGCGGGCAGGGACTGAAGCCTGACCGACCTCCAGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
3UTR CCA 72 bp CCCAGGAAAAGCAACGCCCCCTTGCCAGGATGCCAGTaGGAGGACGGCAGGATGGCAGCCCAGGCCACGTGG +
Preference number: 3 (lower is better)
Translates to: PRKSNAPLPGCQ*EDGRMAAQATW
Trigger: CCACGTGGCCTGGGCTGCCATCCTGCCGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR-3UTR CAA 90 bp CAGGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCGCTCACATGAGGTCGTaGAGCTCCGCCTCCAGCGCC +
Preference number: 3 (lower is better)
Translates to: QAARQSRRSPEMGSLGGSAHMRS*SSASSA
Trigger: GGCGCTGGAGGCGGAGCTCAACGACCTCATGTGAGC...GCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
3UTR CCA 72 bp AGCAGCAGGCGGCGGGGGTTCCAGGCATGTCTGTGCTaGGCTCGGAGCTCGTGCACGCACACTGTCCTGCTT +
Preference number: 3 (lower is better)
Translates to: SSRRRGFQACLC*ARSSCTHTVLL
Trigger: AAGCAGGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCGCCTGCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR TCA 72 bp CATGTCCTTTGGGAAGAAAGCAGCGTGGACCGAGACTaGGGGCTGGTCCGGGGACGTCCGAGTGCTGCTGGA +
Preference number: 3 (lower is better)
Translates to: HVLWEESSVDRD*GLVRGRPSAAG
Trigger: TCCAGCAGCACTCGGACGTCCCCGGACCAGCCCTCAGTCTCGGTCCACGCTGCTTTCTTCCCAAAGGACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR GCA 72 bp GGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTaGACGCACACTGTCCTGCTTAAACTCCTAGTCCAT +
Preference number: 3 (lower is better)
Translates to: GFQACLCWARSS*THTVLLKLLVH
Trigger: ATGGACTAGGAGTTTAAGCAGGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR CCA 72 bp CTGCAAATATACATGTCCTTTGGGAAGAAAGCAGCGTaGACCGAGACTGAGGGCTGGTCCGGGGACGTCCGA +
Preference number: 3 (lower is better)
Translates to: LQIYMSFGKKAA*TETEGWSGDVR
Trigger: TCGGACGTCCCCGGACCAGCCCTCAGTCTCGGTCCACGCTGCTTTCTTCCCAAAGGACATGTATATTTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
3UTR CCA 72 bp CACACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGTaGGACCCCCAAAGCCGTCCCCTAAGGAATGTGCTC +
Preference number: 3 (lower is better)
Translates to: HTVLLKLLVHVS*DPQSRPLRNVL
Trigger: GAGCACATTCCTTAGGGGACGGCTTTGGGGGTCCCACGAGACATGGACTAGGAGTTTAAGCAGGACAGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000299543.8
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCCCGCCACCCGGCCACCCTaGGCACAGGATCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GPGTSECCWRSVRLQSLPATRPP*AQDPWG
Trigger: GCCCCAGGGATCCTGTGCGCAGGGTGGCCGGGTGGC...GGGCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp TGGGAGGACGGCAGGATGGCAGCCCAGGCCACGTGGCGTGGACCCTGCGTAGGAGCCACCCGGCCACCCTaGGCACAGGATCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: WEDGRMAAQATWRGPCVGATRPP*AQDPWG
Trigger: GCCCCAGGGATCCTGTGCGCAGGGTGGCCGGGTGGC...TCCTACGCAGGGTCCACGCCACGTGGCCTGGGCTGCCATCCTGCCGTCCTCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp CAGGCGGCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACGCGCGGCGATCAGGTaGGTGGCCCTGTCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: QAAGVPGMSVLGSELVHARAAIR*VALSGA
Trigger: CGCCCCTGACAGGGCCACGCACCTGATCGCCGCGCG...TGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCGCCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCCCCGAGCGTCCGCTCCCTaGGGGTCCCTGGCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: GPGTSECCWRSVRLQSLPRASAP*GSLASG
Trigger: CCCGGAAGCCAGGGACCCGCAGGGAGCGGACGCTCG...GGGCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000613122.5
CDS-3UTR CCA 90 bp ACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCCCGCTGCCCGCGTGCCCGTGGCACCCTaGGCAGGCCGCTGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: TSECCWRSVRLQSLPAARVPVAP*AGRCPG
Trigger: ACCGGGACAGCGGCCTGCCCAGGGTGCCACGGGCAC...GCGGGCAGCGGGCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GGCGGCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACCGCGCTCCTCTCGCTaGACGCAGGTGCCCCGAGCG +
Preference number: 4 (lower is better)
Translates to: GGGGSRHVCAGLGARARTPRSSR*TQVPRA
Trigger: CGCTCGGGGCACCTGCGTCCAGCGAGAGGAGCGCGG...TGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000613122.5
CDS-3UTR CCA 90 bp GAGCAGCAGGCGGCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGTCCTCTTGTGGCCTCTaGGCCCCCGGCCCCCTGCCG +
Preference number: 4 (lower is better)
Translates to: EQQAAGVPGMSVLGSELVSSCGL*APGPLP
Trigger: CGGCAGGGGGCCGGGGGCCCAGAGGCCACAAGAGGA...CACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCGCCTGCTGCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000613122.5
CDS-3UTR GCA 90 bp GAGCAGCAGGCGGCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGGGTCGGTACGGGGCCTaGGCTGCGCTCAGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: EQQAAGVPGMSVLGSELVGRYGA*AALRAQ
Trigger: CTGCGCTCTGAGCGCAGCGCAGGCCCCGTACCGACC...CACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCGCCTGCTGCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000613122.5
CDS-3UTR GCA 90 bp GAGCAGCAGGCGGCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGGGACGCAGGCGCGTGTaGAGCATGGGCTCACCCCGG +
Preference number: 4 (lower is better)
Translates to: EQQAAGVPGMSVLGSELVGRRRV*SMGSPR
Trigger: CCGGGGTGAGCCCATGCTGCACACGCGCCTGCGTCC...CACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCGCCTGCTGCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GCCCAGGCCACGTGGCGTGGACCCTGCGTAGGAGGCTGCAGGAAGCTCCAGGCTGGACGCAGGCGCGTGTaGAGCATGGGCTCACCCCGG +
Preference number: 4 (lower is better)
Translates to: AQATWRGPCVGGCRKLQAGRRRV*SMGSPR
Trigger: CCGGGGTGAGCCCATGCTGCACACGCGCCTGCGTCC...AGCCTGGAGCTTCCTGCAGCCTCCTACGCAGGGTCCACGCCACGTGGCCTGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp CAGGCGGCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACAGGGAACTGCCCTGTaGCAGCGCCCCGGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: QAAGVPGMSVLGSELVHAQGTAL*QRPGSL
Trigger: GAGGGAGCCGGGGCGCTGGCACAGGGCAGTTCCCTG...TGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCGCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp TCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGGCGGCGGGGGCAGGGAACTGCCCTGTaGCAGCGCCCCGGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: SRRSPEMGSLGGSSRRRGQGTAL*QRPGSL
Trigger: GAGGGAGCCGGGGCGCTGGCACAGGGCAGTTCCCTG...CCCCCGCCGCCTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp TGGAGGTCGGTCAGGCTTCAGTCCCTGCCCGCTGCCCGCGCTCACATGAGGTCGCCGGCTCCAGGGAACTaGCCTGTGCCAGCGCCCCGG +
Preference number: 4 (lower is better)
Translates to: WRSVRLQSLPAARAHMRSPAPGN*PVPAPR
Trigger: CCGGGGCGCTGGCACAGGGCAGTTCCCTGGAGCCGG...CGACCTCATGTGAGCGCGGGCAGCGGGCAGGGACTGAAGCCTGACCGACCTCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
CDS-3UTR GCA 90 bp GGCCGCCCAGGAAAAGCAACGCCCCCTTGCCAGGATGCCAGTGGGAGGACGGCACCGGCTCCAGGGAACTaGCCTGTGCCAGCGCCCCGG +
Preference number: 4 (lower is better)
Translates to: GRPGKATPPCQDASGRTAPAPGN*PVPAPR
Trigger: CCGGGGCGCTGGCACAGGGCAGTTCCCTGGAGCCGG...TGCCGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGGGCGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GGCCGCCCAGGAAAAGCAACGCCCCCTTGCCAGGATGCCAGTGGGAGGACGGCACGCGCGGCGATCAGGTaGGTGGCCCTGTCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: GRPGKATPPCQDASGRTARAAIR*VALSGA
Trigger: CGCCCCTGACAGGGCCACGCACCTGATCGCCGCGCG...TGCCGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGGGCGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp TGGAGGTCGGTCAGGCTTCAGTCCCTGCCCGCTGCCCGCGCTCACATGAGGTCGCGAGCGTCCGCTCCCTaGGGGTCCCTGGCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: WRSVRLQSLPAARAHMRSRASAP*GSLASG
Trigger: CCCGGAAGCCAGGGACCCGCAGGGAGCGGACGCTCG...CGACCTCATGTGAGCGCGGGCAGCGGGCAGGGACTGAAGCCTGACCGACCTCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000075430.11
CDS-3UTR GCA 90 bp TGGGAGGACGGCAGGATGGCAGCCCAGGCCACGTGGCGTGGACCCTGCGTAGGACTCGCTGGACGCAGGTaGCCCGAGCGTCCGCTCCCT +
Preference number: 4 (lower is better)
Translates to: WEDGRMAAQATWRGPCVGLAGRR*PERPLP
Trigger: AGGGAGCGGACGCTCGGGGCACCTGCGTCCAGCGAG...TCCTACGCAGGGTCCACGCCACGTGGCCTGGGCTGCCATCCTGCCGTCCTCCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000613122.5
CDS-3UTR CCA 90 bp ACACCAACCCGCCCCTTACCGAGACAGCGGGCGCACCAGCCTGGGCCACGTGAGGGCGCGTGTGCAGCATaGGCTCACCCCGGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: TPTRPLPRQRAHQPGPREGACAA*AHPGPA
Trigger: AGCTGGGCCGGGGTGAGCCCATGCTGCACACGCGCC...CTCACGTGGCCCAGGCTGGTGCGCCCGCTGTCTCGGTAAGGGGCGGGTTGGTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCCCGCTGCGGCGCGTGTGCAGCATaGGCTCACCCCGGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GDVRVLLEVGQASVPARCGACAA*AHPGPA
Trigger: AGCTGGGCCGGGGTGAGCCCATGCTGCACACGCGCC...GCAGCGGGCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp ACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCCCGCTGCCCGCGTGAGTCCCGCGGGGTaGCGGCCTCGCTGCCGTTCA +
Preference number: 4 (lower is better)
Translates to: TSECCWRSVRLQSLPAARVSPAG*RPRCRS
Trigger: TGAACGGCAGCGAGGCCGCCACCCCGCGGGACTCAC...GCGGGCAGCGGGCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCCCGCGCCTGCCAGCTCTTaGCTGCTGGTGGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GPGTSECCWRSVRLQSLPAPASS*LLVGAW
Trigger: CCAGGCCCCCACCAGCAGCCAAGAGCTGGCAGGCGC...GGGCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp CAGGCGGCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCAGCGCCTGCCAGCTCTTaGCTGCTGGTGGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: QAAGVPGMSVLGSELVHAAPASS*LLVGAW
Trigger: CCAGGCCCCCACCAGCAGCCAAGAGCTGGCAGGCGC...TGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCGCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCCCCCAGGTCAGTGCCCGTaGCACCCTGGGCAGGCCGCT +
Preference number: 4 (lower is better)
Translates to: GPGTSECCWRSVRLQSLPPGQCP*HPGQAA
Trigger: AGCGGCCTGCCCAGGGTGCCACGGGCACTGACCTGG...GGGCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp CAGGCGGCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACGCCCCGGCTCCCTCTaGGGCAGCCTTCGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: QAAGVPGMSVLGSELVHARPGSL*GSLRLL
Trigger: CAGAAGCCGAAGGCTGCCCCAGAGGGAGCCGGGGCG...TGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCGCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp TCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGGCGGCGGGGGCGCCCCGGCTCCCTCTaGGGCAGCCTTCGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SRRSPEMGSLGGSSRRRGRPGSL*GSLRLL
Trigger: CAGAAGCCGAAGGCTGCCCCAGAGGGAGCCGGGGCG...CCCCCGCCGCCTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp TGGGAGGACGGCAGGATGGCAGCCCAGGCCACGTGGCGTGGACCCTGCGTAGGACGGCGATCAGGTGCGTaGCCCTGTCAGGGGCGTCGG +
Preference number: 4 (lower is better)
Translates to: WEDGRMAAQATWRGPCVGRRSGA*PCQGRR
Trigger: CCGACGCCCCTGACAGGGCCACGCACCTGATCGCCG...TCCTACGCAGGGTCCACGCCACGTGGCCTGGGCTGCCATCCTGCCGTCCTCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp CGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCCCGCTGCCCGCGACCTCGGGGCCAGGCTaGGCCTTGGGAAGAACCGGC +
Preference number: 4 (lower is better)
Translates to: RPSAAGGRSGFSPCPLPATSGPG*ALGRTG
Trigger: GCCGGTTCTTCCCAAGGCCCAGCCTGGCCCCGAGGT...CGCGGGCAGCGGGCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp ATGCCAGTGGGAGGACGGCAGGATGGCAGCCCAGGCCACGTGGCGTGGACCCTGGGATGGGTAGGGAGCTaGAGGGTGCTGGGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: MPVGGRQDGSPGHVAWTLGWVGS*RVLGAP
Trigger: GGGGGCCCCCAGCACCCTCCAGCTCCCTACCCATCC...CAGGGTCCACGCCACGTGGCCTGGGCTGCCATCCTGCCGTCCTCCCACTGGCAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GGCGGCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACAGGGAGGACGGCAGGATaGCAGCCCAGGCCACGTGGC +
Preference number: 4 (lower is better)
Translates to: GGGGSRHVCAGLGARARTGRTAG*QPRPRG
Trigger: GCCACGTGGCCTGGGCTGCCATCCTGCCGTCCTCCC...TGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp GGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCCCGAGGCTACACGGGACTaGGAGGCCCCGGAGGACTGC +
Preference number: 4 (lower is better)
Translates to: GPGTSECCWRSVRLQSLPEATRD*EAPEDC
Trigger: GCAGTCCTCCGGGGCCTCTCAGTCCCGTGTAGCCTC...GGGCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000613122.5
CDS-3UTR TCA 90 bp CAGGCGGCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCAGAGGCTACACGGGACTaGGAGGCCCCGGAGGACTGC +
Preference number: 4 (lower is better)
Translates to: QAAGVPGMSVLGSELVHAEATRD*EAPEDC
Trigger: GCAGTCCTCCGGGGCCTCTCAGTCCCGTGTAGCCTC...TGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCGCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000613122.5
CDS-3UTR TCA 90 bp CAGGCGGCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCAGGGACTCACCCGCAGTaGCCCCCGACAGCTCGCTGT +
Preference number: 4 (lower is better)
Translates to: QAAGVPGMSVLGSELVHAGTHPQ*PPTARC
Trigger: ACAGCGAGCTGTCGGGGGTCACTGCGGGTGAGTCCC...TGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCGCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp CACGTGGCGTGGACCCTGCGTAGGAGGCTGCAGGAAGCTCCAGGCTGCCCGACAGGGTGGCGGCCTCGCTaGCGTTCAGCTCCCGTGCAG +
Preference number: 4 (lower is better)
Translates to: HVAWTLRRRLQEAPGCPTGWRPR*RSAPVQ
Trigger: CTGCACGGGAGCTGAACGGCAGCGAGGCCGCCACCC...TGTCGGGCAGCCTGGAGCTTCCTGCAGCCTCCTACGCAGGGTCCACGCCACGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp AGAAAGCAGCGTGGACCGAGACTGAGGGCTGGTCCGGGGACGTCCGAGTGCTGCGCCACCCGGCCACCCTaGGCACAGGATCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: RKQRGPRLRAGPGTSECCATRPP*AQDPWG
Trigger: GCCCCAGGGATCCTGTGCGCAGGGTGGCCGGGTGGC...GCAGCACTCGGACGTCCCCGGACCAGCCCTCAGTCTCGGTCCACGCTGCTTTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp CAGGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCGGGGAGACTCGGTGCTaGAGGCCGCCCCGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: QAARQSRRSPEMGSLGGSGETRC*RPPRLQ
Trigger: CTGGAGCCGGGGCGGCCTGCAGCACCGAGTCTCCCC...GCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp AGAAAGCAGCGTGGACCGAGACTGAGGGCTGGTCCGGGGACGTCCGAGTGCTGCGGGGAGACTCGGTGCTaGAGGCCGCCCCGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: RKQRGPRLRAGPGTSECCGETRC*RPPRLQ
Trigger: CTGGAGCCGGGGCGGCCTGCAGCACCGAGTCTCCCC...GCAGCACTCGGACGTCCCCGGACCAGCCCTCAGTCTCGGTCCACGCTGCTTTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp AGGTCGGTCAGGCTTCAGTCCCTGCCCGCTGCCCGCGCTCACATGAGGTCGTTGTCCGGGGAGACTCGGTaGTGCAGGCCGCCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: RSVRLQSLPAARAHMRSLSGETR*CRPPRL
Trigger: GAGCCGGGGCGGCCTGCAGCACCGAGTCTCCCCGGA...CAACGACCTCATGTGAGCGCGGGCAGCGGGCAGGGACTGAAGCCTGACCGACCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
CDS-3UTR GCA 90 bp AGAAAGCAGCGTGGACCGAGACTGAGGGCTGGTCCGGGGACGTCCGAGTGCTGCTCCGGGGAGACTCGGTaGTGCAGGCCGCCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: RKQRGPRLRAGPGTSECCSGETR*CRPPRL
Trigger: GAGCCGGGGCGGCCTGCAGCACCGAGTCTCCCCGGA...GCAGCACTCGGACGTCCCCGGACCAGCCCTCAGTCTCGGTCCACGCTGCTTTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCCCTCCTTGTCCGGGGCATaGGCGCCAGGCTCGGCCTCT +
Preference number: 4 (lower is better)
Translates to: GPGTSECCWRSVRLQSLPSLSGA*APGSAS
Trigger: AGAGGCCGAGCCTGGCGCGCATGCCCCGGACAAGGA...GGGCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp CAGGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCCGCGCGGCGATCAGGTaGGTGGCCCTGTCAGGGGCG +
Preference number: 4 (lower is better)
Translates to: QAARQSRRSPEMGSLGGSRAAIR*VALSGA
Trigger: CGCCCCTGACAGGGCCACGCACCTGATCGCCGCGCG...GCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp CTTCAGTCCCTGCCCGCTGCCCGCGCTCACATGAGGTCGTTGAGCTCCGCCTCCCACCAGAACCGCTCCTaGGGCGACCACCTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: LQSLPAARAHMRSLSSASHQNRS*GDHLAR
Trigger: CCGGGCCAGGTGGTCGCCCCAGGAGCGGTTCTGGTG...GGAGGCGGAGCTCAACGACCTCATGTGAGCGCGGGCAGCGGGCAGGGACTGAAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
CDS-3UTR CCA 90 bp TGGAGGTCGGTCAGGCTTCAGTCCCTGCCCGCTGCCCGCGCTCACATGAGGTCGCACCAGAACCGCTCCTaGGGCGACCACCTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: WRSVRLQSLPAARAHMRSHQNRS*GDHLAR
Trigger: CCGGGCCAGGTGGTCGCCCCAGGAGCGGTTCTGGTG...CGACCTCATGTGAGCGCGGGCAGCGGGCAGGGACTGAAGCCTGACCGACCTCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
CDS-3UTR CCA 90 bp GGCCGCCCAGGAAAAGCAACGCCCCCTTGCCAGGATGCCAGTGGGAGGACGGCACACCAGAACCGCTCCTaGGGCGACCACCTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: GRPGKATPPCQDASGRTAHQNRS*GDHLAR
Trigger: CCGGGCCAGGTGGTCGCCCCAGGAGCGGTTCTGGTG...TGCCGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGGGCGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GCTCCAGGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGTGCCCGTGGCACCCTaGGCAGGCCGCTGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: APGCPTVTAFPGNGFPRRVPVAP*AGRCPG
Trigger: ACCGGGACAGCGGCCTGCCCAGGGTGCCACGGGCAC...CCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTGGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp ATGCCAGTGGGAGGACGGCAGGATGGCAGCCCAGGCCACGTGGCGTGGACCCTGTCGCTCCCAGCGCCGTaGCGTGGTAATGCTCCCGCG +
Preference number: 4 (lower is better)
Translates to: MPVGGRQDGSPGHVAWTLSLPAP*RGNAPA
Trigger: CGCGGGAGCATTACCACGCCACGGCGCTGGGAGCGA...CAGGGTCCACGCCACGTGGCCTGGGCTGCCATCCTGCCGTCCTCCCACTGGCAT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GGCCGCCCAGGAAAAGCAACGCCCCCTTGCCAGGATGCCAGTGGGAGGACGGCACGGCGATCAGGTGCGTaGCCCTGTCAGGGGCGTCGG +
Preference number: 4 (lower is better)
Translates to: GRPGKATPPCQDASGRTARRSGA*PCQGRR
Trigger: CCGACGCCCCTGACAGGGCCACGCACCTGATCGCCG...TGCCGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGGGCGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GCTGGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCCTGGCTTCCGGGGCTaGGGCTCCTCCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: AGPGTSECCWRSVRLQSLPGFRG*GSSSCS
Trigger: GGAGCAGGAGGAGGAGCCCCAGCCCCGGAAGCCAGG...CAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000613122.5
CDS-3UTR CCA 90 bp CTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCCCGCTGCCCGCGCTCACATGAGGGGAGGACGGCAGGATaGCAGCCCAGGCCACGTGGC +
Preference number: 4 (lower is better)
Translates to: LLEVGQASVPARCPRSHEGRTAG*QPRPRG
Trigger: GCCACGTGGCCTGGGCTGCCATCCTGCCGTCCTCCC...CTCATGTGAGCGCGGGCAGCGGGCAGGGACTGAAGCCTGACCGACCTCCAGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
CDS-3UTR TCA 90 bp CTTCAGTCCCTGCCCGCTGCCCGCGCTCACATGAGGTCGTTGAGCTCCGCCTCCAGCGTGGACCGAGACTaGGGGCTGGTCCGGGGACGT +
Preference number: 4 (lower is better)
Translates to: LQSLPAARAHMRSLSSASSVDRD*GLVRGR
Trigger: ACGTCCCCGGACCAGCCCTCAGTCTCGGTCCACGCT...GGAGGCGGAGCTCAACGACCTCATGTGAGCGCGGGCAGCGGGCAGGGACTGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
CDS-3UTR TCA 90 bp CACGTGGCGTGGACCCTGCGTAGGAGGCTGCAGGAAGCTCCAGGCTGCCCGACAAGCGTGGACCGAGACTaGGGGCTGGTCCGGGGACGT +
Preference number: 4 (lower is better)
Translates to: HVAWTLRRRLQEAPGCPTSVDRD*GLVRGR
Trigger: ACGTCCCCGGACCAGCCCTCAGTCTCGGTCCACGCT...TGTCGGGCAGCCTGGAGCTTCCTGCAGCCTCCTACGCAGGGTCCACGCCACGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp CACCAACCCGCCCCTTACCGAGACAGCGGGCGCACCAGCCTGGGCCACGTGAGCGGCTGCTCTCCGTCCTaGGCGTCAGGCAGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: HQPAPYRDSGRTSLGHVSGCSPS*ASGSSS
Trigger: TGAAGAGCTGCCTGACGCTCAGGACGGAGAGCAGCC...GCTCACGTGGCCCAGGCTGGTGCGCCCGCTGTCTCGGTAAGGGGCGGGTTGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTGTACGGGGCCTGCGCTaGGCTCAGAGCGCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: AGVPGMSVLGSELVHAHCVRGLR*AQSAAP
Trigger: AGGCGCTGCGCTCTGAGCGCAGCGCAGGCCCCGTAC...ACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000613122.5
CDS-3UTR GCA 90 bp CAGGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCGTACGGGGCCTGCGCTaGGCTCAGAGCGCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: QAARQSRRSPEMGSLGGSVRGLR*AQSAAP
Trigger: AGGCGCTGCGCTCTGAGCGCAGCGCAGGCCCCGTAC...GCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000613122.5
CDS-3UTR GCA 90 bp AGAAAGCAGCGTGGACCGAGACTGAGGGCTGGTCCGGGGACGTCCGAGTGCTGCGGACGCAGGCGCGTGTaGAGCATGGGCTCACCCCGG +
Preference number: 4 (lower is better)
Translates to: RKQRGPRLRAGPGTSECCGRRRV*SMGSPR
Trigger: CCGGGGTGAGCCCATGCTGCACACGCGCCTGCGTCC...GCAGCACTCGGACGTCCCCGGACCAGCCCTCAGTCTCGGTCCACGCTGCTTTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GCTCCAGGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGGGTGGCGGCCTCGCTaGCGTTCAGCTCCCGTGCAG +
Preference number: 4 (lower is better)
Translates to: APGCPTVTAFPGNGFPRRGWRPR*RSAPVQ
Trigger: CTGCACGGGAGCTGAACGGCAGCGAGGCCGCCACCC...CCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTGGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp AAAACACACCAACCCGCCCCTTACCGAGACAGCGGGCGCACCAGCCTGGGCCACGGGTGGCGGCCTCGCTaGCGTTCAGCTCCCGTGCAG +
Preference number: 4 (lower is better)
Translates to: KTHQPAPYRDSGRTSLGHGWRPR*RSAPVQ
Trigger: CTGCACGGGAGCTGAACGGCAGCGAGGCCGCCACCC...GTGGCCCAGGCTGGTGCGCCCGCTGTCTCGGTAAGGGGCGGGTTGGTGTGTTTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp AAAGGCCGCCCAGGAAAAGCAACGCCCCCTTGCCAGGATGCCAGTGGGAGGACGGGGGAGACTCGGTGCTaGAGGCCGCCCCGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: KGRPGKATPPCQDASGRTGETRC*RPPRLQ
Trigger: CTGGAGCCGGGGCGGCCTGCAGCACCGAGTCTCCCC...CGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGGGCGGCCTTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCGCTCGCCCTCCTCCTaGCCACCCAGCTCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: GCPTVTAFPGNGFPRREQRSPSS*PPSSGS
Trigger: GGAGCCTGAGCTGGGTGGGCAGGAGGAGGGCGAGCG...CTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTCGCTCGCCCTCCTCCTaGCCACCCAGCTCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: AGVPGMSVLGSELVHAHCRSPSS*PPSSGS
Trigger: GGAGCCTGAGCTGGGTGGGCAGGAGGAGGGCGAGCG...ACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTCCCTCGCTGGACGCAGGTaGCCCGAGCGTCCGCTCCCT +
Preference number: 4 (lower is better)
Translates to: GGSRHVCAGLGARARTLSLAGRR*PERPLP
Trigger: AGGGAGCGGACGCTCGGGGCACCTGCGTCCAGCGAG...GGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000613122.5
CDS-3UTR GCA 90 bp GGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCCCCGTCGGCCTCGGAGCTaGTGCCCTCATCCTCGTTGC +
Preference number: 4 (lower is better)
Translates to: GPGTSECCWRSVRLQSLPRRPRS*CPHPRC
Trigger: GCAACGAGGATGAGGGCAGCAGCTCCGAGGCCGACG...GGGCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp TGGGAGGACGGCAGGATGGCAGCCCAGGCCACGTGGCGTGGACCCTGCGTAGGATCAGTCCCTGCCCGCTaGCCGCGCTCACATGAGGTC +
Preference number: 4 (lower is better)
Translates to: WEDGRMAAQATWRGPCVGSVPAR*PRSHEV
Trigger: GACCTCATGTGAGCGCGGGCAGCGGGCAGGGACTGA...TCCTACGCAGGGTCCACGCCACGTGGCCTGGGCTGCCATCCTGCCGTCCTCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp ATGCCAGTGGGAGGACGGCAGGATGGCAGCCCAGGCCACGTGGCGTGGACCCTGTCAGTCCCTGCCCGCTaGCCGCGCTCACATGAGGTC +
Preference number: 4 (lower is better)
Translates to: MPVGGRQDGSPGHVAWTLSVPAR*PRSHEV
Trigger: GACCTCATGTGAGCGCGGGCAGCGGGCAGGGACTGA...CAGGGTCCACGCCACGTGGCCTGGGCTGCCATCCTGCCGTCCTCCCACTGGCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp ATGCCAGTGGGAGGACGGCAGGATGGCAGCCCAGGCCACGTGGCGTGGACCCTGTGGACACGGTCGCCGTaGACAGCGGCACCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: MPVGGRQDGSPGHVAWTLWTRSP*TAAPAA
Trigger: AGCAGCAGGTGCCGCTGTCCACGGCGACCGTGTCCA...CAGGGTCCACGCCACGTGGCCTGGGCTGCCATCCTGCCGTCCTCCCACTGGCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp CAGGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCGTGAGTCCCGCGGGGTaGCGGCCTCGCTGCCGTTCA +
Preference number: 4 (lower is better)
Translates to: QAARQSRRSPEMGSLGGSVSPAG*RPRCRS
Trigger: TGAACGGCAGCGAGGCCGCCACCCCGCGGGACTCAC...GCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTCCTGGTGCCCGTGGCACCCTaGGCAGGCCGCTGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: GFQACLCWARSSCTHTVLVPVAP*AGRCPG
Trigger: ACCGGGACAGCGGCCTGCCCAGGGTGCCACGGGCAC...CAGGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp CCGCGCTCACATGAGGTCGTTGAGCTCCGCCTCCAGCGCCTTGGCCATCTCGTCCCAGGTCAGTGCCCGTaGCACCCTGGGCAGGCCGCT +
Preference number: 4 (lower is better)
Translates to: PRSHEVVELRLQRLGHLVPGQCP*HPGQAA
Trigger: AGCGGCCTGCCCAGGGTGCCACGGGCACTGACCTGG...GACGAGATGGCCAAGGCGCTGGAGGCGGAGCTCAACGACCTCATGTGAGCGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
CDS-3UTR CCA 90 bp CTCCAGGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGCCAGGTCAGTGCCCGTaGCACCCTGGGCAGGCCGCT +
Preference number: 4 (lower is better)
Translates to: LQAARQSRRSPEMGSLGGPGQCP*HPGQAA
Trigger: AGCGGCCTGCCCAGGGTGCCACGGGCACTGACCTGG...CCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp CAGGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCCGCCCCGGCTCCCTCTaGGGCAGCCTTCGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: QAARQSRRSPEMGSLGGSRPGSL*GSLRLL
Trigger: CAGAAGCCGAAGGCTGCCCCAGAGGGAGCCGGGGCG...GCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp CTGGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCTCGCTCCCAGCGCCGTaGCGTGGTAATGCTCCCGCG +
Preference number: 4 (lower is better)
Translates to: LVRGRPSAAGGRSGFSPCSLPAP*RGNAPA
Trigger: CGCGGGAGCATTACCACGCCACGGCGCTGGGAGCGA...GCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp AGGATGGCAGCCCAGGCCACGTGGCGTGGACCCTGCGTAGGAGGCTGCAGGAAGACCTCGGGGCCAGGCTaGGCCTTGGGAAGAACCGGC +
Preference number: 4 (lower is better)
Translates to: RMAAQATWRGPCVGGCRKTSGPG*ALGRTG
Trigger: GCCGGTTCTTCCCAAGGCCCAGCCTGGCCCCGAGGT...CTTCCTGCAGCCTCCTACGCAGGGTCCACGCCACGTGGCCTGGGCTGCCATCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp CAGGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCGGATGGGTAGGGAGCTaGAGGGTGCTGGGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: QAARQSRRSPEMGSLGGSGWVGS*RVLGAP
Trigger: GGGGGCCCCCAGCACCCTCCAGCTCCCTACCCATCC...GCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp AGAAAGCAGCGTGGACCGAGACTGAGGGCTGGTCCGGGGACGTCCGAGTGCTGCGGATGGGTAGGGAGCTaGAGGGTGCTGGGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: RKQRGPRLRAGPGTSECCGWVGS*RVLGAP
Trigger: GGGGGCCCCCAGCACCCTCCAGCTCCCTACCCATCC...GCAGCACTCGGACGTCCCCGGACCAGCCCTCAGTCTCGGTCCACGCTGCTTTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTCCTGCCGCGCTCCTCTCGCTaGACGCAGGTGCCCCGAGCG +
Preference number: 4 (lower is better)
Translates to: GFQACLCWARSSCTHTVLPRSSR*TQVPRA
Trigger: CGCTCGGGGCACCTGCGTCCAGCGAGAGGAGCGCGG...CAGGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000613122.5
CDS-3UTR CCA 90 bp CAGGCGGCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCATGCTGGACTCCCTGCTaGACTCGCTGGCGGCGTCCT +
Preference number: 4 (lower is better)
Translates to: QAAGVPGMSVLGSELVHACWTPC*TRWRRP
Trigger: AGGACGCCGCCAGCGAGTCCAGCAGGGAGTCCAGCA...TGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTCCCCGCCTCCAGCGCCTTaGCCATCTCGTCGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: GGSRHVCAGLGARARTLSPPPAP*PSRRPR
Trigger: CCGAGGCCGACGAGATGGCCAAGGCGCTGGAGGCGG...GGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp CGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCCCGCTGCCCGCGCAGGCATGTCTGTGCTaGGCTCGGAGCTCGTGCACG +
Preference number: 4 (lower is better)
Translates to: RPSAAGGRSGFSPCPLPAQACLC*ARSSCT
Trigger: CGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTG...CGCGGGCAGCGGGCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp CGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCCCGCTGCCCGCGCCAAACATCTGCGGCTaGGGTGGCGGAACCGCTCTG +
Preference number: 4 (lower is better)
Translates to: RPSAAGGRSGFSPCPLPAPNICG*GGGTAL
Trigger: CAGAGCGGTTCCGCCACCCCAGCCGCAGATGTTTGG...CGCGGGCAGCGGGCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591598.5
ENST00000613122.5
3UTR CAA 72 bp CAGTCCCTGCCCGCTGCCCGCGCTCACATGAGGTCGTaGAGCTCCGCCTCCAGCGCCTTGGCCATCTCGTCG +
Preference number: 4 (lower is better)
Translates to: QSLPAARAHMRS*SSASSALAISS
Trigger: CGACGAGATGGCCAAGGCGCTGGAGGCGGAGCTCAACGACCTCATGTGAGCGCGGGCAGCGGGCAGGGACTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
CDS-3UTR TCA 90 bp CAGGCGGCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCAGCCGGCTGCCGAAGGTaGAGACGTGCAGCTCGTACA +
Preference number: 4 (lower is better)
Translates to: QAAGVPGMSVLGSELVHAAGCRR*RRAART
Trigger: TGTACGAGCTGCACGTCTTCACCTTCGGCAGCCGGC...TGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp GGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCCCGCCGGCTGCCGAAGGTaGAGACGTGCAGCTCGTACA +
Preference number: 4 (lower is better)
Translates to: GPGTSECCWRSVRLQSLPAGCRR*RRAART
Trigger: TGTACGAGCTGCACGTCTTCACCTTCGGCAGCCGGC...GGGCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp GAGCAGCAGGCGGCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGGCCGGCTGCCGAAGGTaGAGACGTGCAGCTCGTACA +
Preference number: 4 (lower is better)
Translates to: EQQAAGVPGMSVLGSELVAGCRR*RRAART
Trigger: TGTACGAGCTGCACGTCTTCACCTTCGGCAGCCGGC...CACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCGCCTGCTGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp CTCCAGGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGGGGACTCACCCGCAGTaGCCCCCGACAGCTCGCTGT +
Preference number: 4 (lower is better)
Translates to: LQAARQSRRSPEMGSLGGGTHPQ*PPTARC
Trigger: ACAGCGAGCTGTCGGGGGTCACTGCGGGTGAGTCCC...CCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTGGAG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp CACCAACCCGCCCCTTACCGAGACAGCGGGCGCACCAGCCTGGGCCACGTGAGCTGGTGTGATCGTCCCTaGGCGGGAAGAGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: HQPAPYRDSGRTSLGHVSWCDRP*AGRAAP
Trigger: AGGAGCAGCTCTTCCCGCTCAGGGACGATCACACCA...GCTCACGTGGCCCAGGCTGGTGCGCCCGCTGTCTCGGTAAGGGGCGGGTTGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp TCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGGCGGCGGGGGAACTCCGGCACGCTGTaGACCATGGACACGGTCGCC +
Preference number: 4 (lower is better)
Translates to: SRRSPEMGSLGGSSRRRGNSGTL*TMDTVA
Trigger: GGCGACCGTGTCCATGGTGCACAGCGTGCCGGAGTT...CCCCCGCCGCCTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCCCAACTCCGGCACGCTGTaGACCATGGACACGGTCGCC +
Preference number: 4 (lower is better)
Translates to: GPGTSECCWRSVRLQSLPNSGTL*TMDTVA
Trigger: GGCGACCGTGTCCATGGTGCACAGCGTGCCGGAGTT...GGGCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp TGGGAGGACGGCAGGATGGCAGCCCAGGCCACGTGGCGTGGACCCTGCGTAGGACAAAGTCCAGGTCAGTaGCCGTGGCACCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: WEDGRMAAQATWRGPCVGQSPGQ*PWHPGQ
Trigger: CTGCCCAGGGTGCCACGGGCACTGACCTGGACTTTG...TCCTACGCAGGGTCCACGCCACGTGGCCTGGGCTGCCATCCTGCCGTCCTCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCCCTGCCCTCGGACTCACTaGTGCTCTCGCTGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: GPGTSECCWRSVRLQSLPCPRTH*CSRCRW
Trigger: CCAGCGACAGCGAGAGCAGCAGTGAGTCCGAGGGCA...GGGCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GGCTGGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTCGTTGCTGGACTCCCTaGTGGACTCGCTGGCGGCGT +
Preference number: 4 (lower is better)
Translates to: GWSGDVRVLLEVGQASVPRCWTP*WTRWRR
Trigger: ACGCCGCCAGCGAGTCCAGCAGGGAGTCCAGCAACG...AGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp CAGGCTTCAGTCCCTGCCCGCTGCCCGCGCTCACATGAGGTCGTTGAGCTCCGCCGTCGGCCTCGGAGCTaGTGCCCTCATCCTCGTTGC +
Preference number: 4 (lower is better)
Translates to: QASVPARCPRSHEVVELRRRPRS*CPHPRC
Trigger: GCAACGAGGATGAGGGCAGCAGCTCCGAGGCCGACG...GCGGAGCTCAACGACCTCATGTGAGCGCGGGCAGCGGGCAGGGACTGAAGCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
CDS-3UTR GCA 90 bp TGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCCCGCTGCCCGCGCTCACATGAGGTCAGGCTTCAGTCCCTaGCCGCTGCCCGCGCTCACA +
Preference number: 4 (lower is better)
Translates to: CWRSVRLQSLPAARAHMRSGFSP*PLPALT
Trigger: TGTGAGCGCGGGCAGCGGGCAGGGACTGAAGCCTGA...CCTCATGTGAGCGCGGGCAGCGGGCAGGGACTGAAGCCTGACCGACCTCCAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
CDS-3UTR GCA 90 bp CCGCGCTCACATGAGGTCGTTGAGCTCCGCCTCCAGCGCCTTGGCCATCTCGTCCCGGGGACGTCCGAGTaGTGCTGGAGGTCGGTCAGG +
Preference number: 4 (lower is better)
Translates to: PRSHEVVELRLQRLGHLVPGTSE*CWRSVR
Trigger: CCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGG...GACGAGATGGCCAAGGCGCTGGAGGCGGAGCTCAACGACCTCATGTGAGCGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
CDS-3UTR GCA 90 bp CGGCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTCCCTGCGTAGGAGGCTaGAGGAAGCTCCAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: RRGFQACLCWARSSCTHTPCVGG*RKLQAA
Trigger: GGCAGCCTGGAGCTTCCTGCAGCCTCCTACGCAGGG...AGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp CAGGCGGCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCAACGTGGCGTGGACCCTaGGTAGGAGGCTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: QAAGVPGMSVLGSELVHATWRGP*VGGCRK
Trigger: CTTCCTGCAGCCTCCTACGCAGGGTCCACGCCACGT...TGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTCCGCCCCCTTGCCAGGATaGCAGTGGGAGGACGGCAGG +
Preference number: 4 (lower is better)
Translates to: GGSRHVCAGLGARARTLSAPLPG*QWEDGR
Trigger: CCTGCCGTCCTCCCACTGGCATCCTGGCAAGGGGGC...GGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp ACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGGCGGCGGCCCCCTTGCCAGGATaGCAGTGGGAGGACGGCAGG +
Preference number: 4 (lower is better)
Translates to: TVTAFPGNGFPRREQQAAAPLPG*QWEDGR
Trigger: CCTGCCGTCCTCCCACTGGCATCCTGGCAAGGGGGC...CGCCGCCTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GCTCCAGGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGCCCCCTTGCCAGGATaGCAGTGGGAGGACGGCAGG +
Preference number: 4 (lower is better)
Translates to: APGCPTVTAFPGNGFPRRAPLPG*QWEDGR
Trigger: CCTGCCGTCCTCCCACTGGCATCCTGGCAAGGGGGC...CCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTGGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp CTGGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCTGGACACGGTCGCCGTaGACAGCGGCACCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LVRGRPSAAGGRSGFSPCWTRSP*TAAPAA
Trigger: AGCAGCAGGTGCCGCTGTCCACGGCGACCGTGTCCA...GCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCCCGCTGCGCACGCTGTGCACCATaGACACGGTCGCCGTGGACA +
Preference number: 4 (lower is better)
Translates to: GDVRVLLEVGQASVPARCARCAP*TRSPWT
Trigger: TGTCCACGGCGACCGTGTCCATGGTGCACAGCGTGC...GCAGCGGGCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp ACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCCCGCTGCCCGCTCTCCAGGCCATTGCTaGGCTCCACTCCAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: TSECCWRSVRLQSLPAARSPGHC*APLQGP
Trigger: AGGCCCCTGGAGTGGAGCCCAGCAATGGCCTGGAGA...GCGGGCAGCGGGCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp CCAGGAAAAGCAACGCCCCCTTGCCAGGATGCCAGTGGGAGGACGGCAGGATGGGCGCCTGCCAGCTCTTaGCTGCTGGTGGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PGKATPPCQDASGRTAGWAPASS*LLVGAW
Trigger: CCAGGCCCCCACCAGCAGCCAAGAGCTGGCAGGCGC...CCATCCTGCCGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp AAAACACACCAACCCGCCCCTTACCGAGACAGCGGGCGCACCAGCCTGGGCCACTCGCTCCCAGCGCCGTaGCGTGGTAATGCTCCCGCG +
Preference number: 4 (lower is better)
Translates to: KTHQPAPYRDSGRTSLGHSLPAP*RGNAPA
Trigger: CGCGGGAGCATTACCACGCCACGGCGCTGGGAGCGA...GTGGCCCAGGCTGGTGCGCCCGCTGTCTCGGTAAGGGGCGGGTTGGTGTGTTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp AAAACACACCAACCCGCCCCTTACCGAGACAGCGGGCGCACCAGCCTGGGCCACGGTGGAACAAGGCGGTaGGGGGCACACCCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: KTHQPAPYRDSGRTSLGHGGTRR*GAHPPG
Trigger: ACCGGGAGGGTGTGCCCCCCACCGCCTTGTTCCACC...GTGGCCCAGGCTGGTGCGCCCGCTGTCTCGGTAAGGGGCGGGTTGGTGTGTTTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp CATGAGGTCGTTGAGCTCCGCCTCCAGCGCCTTGGCCATCTCGTCGGCCTCGGAACCTCGGGGCCAGGCTaGGCCTTGGGAAGAACCGGC +
Preference number: 4 (lower is better)
Translates to: HEVVELRLQRLGHLVGLGTSGPG*ALGRTG
Trigger: GCCGGTTCTTCCCAAGGCCCAGCCTGGCCCCGAGGT...TCCGAGGCCGACGAGATGGCCAAGGCGCTGGAGGCGGAGCTCAACGACCTCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
CDS-3UTR CCA 90 bp AGGATGGCAGCCCAGGCCACGTGGCGTGGACCCTGCGTAGGAGGCTGCAGGAAGTTCAGCTTCCTCTTGTaGCCTCTGGGCCCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: RMAAQATWRGPCVGGCRKFSFLL*PLGPRP
Trigger: GGGCCGGGGGCCCAGAGGCCACAAGAGGAAGCTGAA...CTTCCTGCAGCCTCCTACGCAGGGTCCACGCCACGTGGCCTGGGCTGCCATCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000613122.5
CDS-3UTR CCA 90 bp GGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTCCTGCCGCCTCCAGCGCCTTaGCCATCTCGTCGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: GFQACLCWARSSCTHTVLPPPAP*PSRRPR
Trigger: CCGAGGCCGACGAGATGGCCAAGGCGCTGGAGGCGG...CAGGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp AGGATGGCAGCCCAGGCCACGTGGCGTGGACCCTGCGTAGGAGGCTGCAGGAAGACCGAGACTGAGGGCTaGTCCGGGGACGTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: RMAAQATWRGPCVGGCRKTETEG*SGDVRV
Trigger: CACTCGGACGTCCCCGGACCAGCCCTCAGTCTCGGT...CTTCCTGCAGCCTCCTACGCAGGGTCCACGCCACGTGGCCTGGGCTGCCATCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp ATGCCAGTGGGAGGACGGCAGGATGGCAGCCCAGGCCACGTGGCGTGGACCCTGCAGGCATGTCTGTGCTaGGCTCGGAGCTCGTGCACG +
Preference number: 4 (lower is better)
Translates to: MPVGGRQDGSPGHVAWTLQACLC*ARSSCT
Trigger: CGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTG...CAGGGTCCACGCCACGTGGCCTGGGCTGCCATCCTGCCGTCCTCCCACTGGCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp CCGCGCTCACATGAGGTCGTTGAGCTCCGCCTCCAGCGCCTTGGCCATCTCGTCCCAGGCCACGTGGCGTaGACCCTGCGTAGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PRSHEVVELRLQRLGHLVPGHVA*TLRRRL
Trigger: CAGCCTCCTACGCAGGGTCCACGCCACGTGGCCTGG...GACGAGATGGCCAAGGCGCTGGAGGCGGAGCTCAACGACCTCATGTGAGCGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
CDS-3UTR CCA 90 bp GCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTCCAGGCCACGTGGCGTaGACCCTGCGTAGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: AGVPGMSVLGSELVHAHCPGHVA*TLRRRL
Trigger: CAGCCTCCTACGCAGGGTCCACGCCACGTGGCCTGG...ACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GCTCCAGGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGCAGCCCAGGCCACGTaGCGTGGACCCTGCGTAGGA +
Preference number: 4 (lower is better)
Translates to: APGCPTVTAFPGNGFPRRAAQAT*RGPCVG
Trigger: TCCTACGCAGGGTCCACGCCACGTGGCCTGGGCTGC...CCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp GAGCAGCAGGCGGCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCAGCTCGCTGTTCTGTaGCTCGGTCTCCGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: EQQAAGVPGMSVLGSELVQLAVL*LGLRLL
Trigger: AAGGAGGCGGAGACCGAGTCACAGAACAGCGAGCTG...CACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCGCCTGCTGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp CAGGCGGCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACAGCTCGCTGTTCTGTaGCTCGGTCTCCGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: QAAGVPGMSVLGSELVHAQLAVL*LGLRLL
Trigger: AAGGAGGCGGAGACCGAGTCACAGAACAGCGAGCTG...TGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp CAGGAAGCTCCAGGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTGGGACTCACCCGCAGTaGCCCCCGACAGCTCGCTGT +
Preference number: 4 (lower is better)
Translates to: QEAPGCPTVTAFPGNGFPGTHPQ*PPTARC
Trigger: ACAGCGAGCTGTCGGGGGTCACTGCGGGTGAGTCCC...AGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTGGAGCTTCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp CAGGCGGCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCAAGGATGTCGTCCACCTaGAGGAAGAGGGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: QAAGVPGMSVLGSELVHARMSST*RKRAPG
Trigger: GCCAGGAGCCCTCTTCCTTCAGGTGGACGACATCCT...TGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000075430.11
CDS-3UTR TCA 90 bp GGCCGCCCAGGAAAAGCAACGCCCCCTTGCCAGGATGCCAGTGGGAGGACGGCAGGCTGCTCTCCGTCCTaGGCGTCAGGCAGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: GRPGKATPPCQDASGRTAGCSPS*ASGSSS
Trigger: TGAAGAGCTGCCTGACGCTCAGGACGGAGAGCAGCC...TGCCGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGGGCGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp CGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCCCGCTGCCCGCGGTGGACAGCGGCACCTaGTGCTTCCCGTTCTTACTC +
Preference number: 4 (lower is better)
Translates to: RPSAAGGRSGFSPCPLPAVDSGT*CFPFLL
Trigger: GAGTAAGAACGGGAAGCAGCAGGTGCCGCTGTCCAC...CGCGGGCAGCGGGCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCCCTCTCCAGGAAGTCCTTaGAGTGTGGACGCAGGCGCG +
Preference number: 4 (lower is better)
Translates to: GPGTSECCWRSVRLQSLPSPGSP*SVDAGA
Trigger: CGCGCCTGCGTCCACACTGCAAGGACTTCCTGGAGA...GGGCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp AGGCCGCCCAGGAAAAGCAACGCCCCCTTGCCAGGATGCCAGTGGGAGGACGGCGCTTCTCCAGGCCATTaGTGGGCTCCACTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: RPPRKSNAPLPGCQWEDGASPGH*WAPLQG
Trigger: CCCCTGGAGTGGAGCCCAGCAATGGCCTGGAGAAGC...GCCGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGGGCGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GCCCAGGCCACGTGGCGTGGACCCTGCGTAGGAGGCTGCAGGAAGCTCCAGGCTGCCGTTCAGCTCCCGTaGAGGCTTCTCCAGGCCATT +
Preference number: 4 (lower is better)
Translates to: AQATWRGPCVGGCRKLQAAVQLP*RLLQAI
Trigger: AATGGCCTGGAGAAGCCTGCACGGGAGCTGAACGGC...AGCCTGGAGCTTCCTGCAGCCTCCTACGCAGGGTCCACGCCACGTGGCCTGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GCTGGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGTGCCCTCGGACTCACTaGTGCTCTCGCTGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: AGPGTSECCWRSVRLQSLCPRTH*CSRCRW
Trigger: CCAGCGACAGCGAGAGCAGCAGTGAGTCCGAGGGCA...CAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp CATGAGGTCGTTGAGCTCCGCCTCCAGCGCCTTGGCCATCTCGTCGGCCTCGGATGTCGGCACAGCCGTTaGCCAGGCCGCAGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: HEVVELRLQRLGHLVGLGCRHSR*PGRRGH
Trigger: ATGGCCTCTGCGGCCTGGGCAACGGCTGTGCCGACA...TCCGAGGCCGACGAGATGGCCAAGGCGCTGGAGGCGGAGCTCAACGACCTCATG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
CDS-3UTR GCA 90 bp GCTCCAGGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGTGTCGGCACAGCCGTTaGCCAGGCCGCAGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: APGCPTVTAFPGNGFPRRCRHSR*PGRRGH
Trigger: ATGGCCTCTGCGGCCTGGGCAACGGCTGTGCCGACA...CCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGGTGTCGGCACAGCCGTTaGCCAGGCCGCAGAGGCCAT +
Preference number: 4 (lower is better)
Translates to: ARQSRRSPEMGSLGGSSRCRHSR*PGRRGH
Trigger: ATGGCCTCTGCGGCCTGGGCAACGGCTGTGCCGACA...CCTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GCCCAGGCCACGTGGCGTGGACCCTGCGTAGGAGGCTGCAGGAAGCTCCAGGCTCCGCACTCCTGTGCCTaGAGCACCTTCTCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: AQATWRGPCVGGCRKLQAPHSCA*STFSVP
Trigger: TGGCACAGAGAAGGTGCTGCAGGCACAGGAGTGCGG...AGCCTGGAGCTTCCTGCAGCCTCCTACGCAGGGTCCACGCCACGTGGCCTGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GAGCAGCAGGCGGCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCCGCACTCCTGTGCCTaGAGCACCTTCTCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: EQQAAGVPGMSVLGSELVPHSCA*STFSVP
Trigger: TGGCACAGAGAAGGTGCTGCAGGCACAGGAGTGCGG...CACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCGCCTGCTGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp CACCAACCCGCCCCTTACCGAGACAGCGGGCGCACCAGCCTGGGCCACGTGAGCGTGTCCGCACTCCTGTaGCTGCAGCACCTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: HQPAPYRDSGRTSLGHVSVSALL*LQHLLC
Trigger: ACAGAGAAGGTGCTGCAGGCACAGGAGTGCGGACAC...GCTCACGTGGCCCAGGCTGGTGCGCCCGCTGTCTCGGTAAGGGGCGGGTTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTCGTTGCTGGACTCCCTaGTGGACTCGCTGGCGGCGT +
Preference number: 4 (lower is better)
Translates to: AGVPGMSVLGSELVHAHCRCWTP*WTRWRR
Trigger: ACGCCGCCAGCGAGTCCAGCAGGGAGTCCAGCAACG...ACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp CTCCAGGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGCGGCCTCGGAGCTGCTaGCCTCATCCTCGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: LQAARQSRRSPEMGSLGGRPRSC*PHPRCW
Trigger: CCAGCAACGAGGATGAGGGCAGCAGCTCCGAGGCCG...CCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GCTGGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGGGGACGTCCGAGTGCTaGTGGAGGTCGGTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: AGPGTSECCWRSVRLQSLGTSEC*WRSVRL
Trigger: AAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCC...CAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp TCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGGCGGCGGGGGTTCCAGGCATGTCTGTaGTGGGCTCGGAGCTCGTGC +
Preference number: 4 (lower is better)
Translates to: SRRSPEMGSLGGSSRRRGFQACL*WARSSC
Trigger: GCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAA...CCCCCGCCGCCTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp ACACCAACCCGCCCCTTACCGAGACAGCGGGCGCACCAGCCTGGGCCACGTGAGTTCCAGGCATGTCTGTaGTGGGCTCGGAGCTCGTGC +
Preference number: 4 (lower is better)
Translates to: TPTRPLPRQRAHQPGPREFQACL*WARSSC
Trigger: GCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAA...CTCACGTGGCCCAGGCTGGTGCGCCCGCTGTCTCGGTAAGGGGCGGGTTGGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GGCTGGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTCAGGAAGCTCCAGGCTaGCCGACAGTCACGGCGTTC +
Preference number: 4 (lower is better)
Translates to: GWSGDVRVLLEVGQASVPQEAPG*PTVTAF
Trigger: GAACGCCGTGACTGTCGGGCAGCCTGGAGCTTCCTG...AGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp CCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGGCGCCCTGCGTAGGAGGCTaGAGGAAGCTCCAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: PTVTAFPGNGFPRREQQAPCVGG*RKLQAA
Trigger: GGCAGCCTGGAGCTTCCTGCAGCCTCCTACGCAGGG...CGCCTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GAAGCTCCAGGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGGGTGGAACAAGGCGGTaGGGGGCACACCCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: EAPGCPTVTAFPGNGFPRGGTRR*GAHPPG
Trigger: ACCGGGAGGGTGTGCCCCCCACCGCCTTGTTCCACC...CCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTGGAGCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp CGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGGCGGGGCCAGGCTGGGCCTTaGGAAGAACCGGCATCGGGT +
Preference number: 4 (lower is better)
Translates to: RQSRRSPEMGSLGGSSRRGQAGP*EEPASG
Trigger: ACCCGATGCCGGTTCTTCCCAAGGCCCAGCCTGGCC...CCGCCTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp CAGGCGGCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCAAAGGAAGAGGGCTCCTaGCGGATGGGTAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: QAAGVPGMSVLGSELVHAKEEGS*RMGREL
Trigger: CAGCTCCCTACCCATCCGCCAGGAGCCCTCTTCCTT...TGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp ACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGGCGGCGTTCAGCTTCCTCTTGTaGCCTCTGGGCCCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: TVTAFPGNGFPRREQQAAFSFLL*PLGPRP
Trigger: GGGCCGGGGGCCCAGAGGCCACAAGAGGAAGCTGAA...CGCCGCCTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000613122.5
CDS-3UTR CCA 90 bp CAGGCGGCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCAACGTCCGAGTGCTGCTaGAGGTCGGTCAGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: QAAGVPGMSVLGSELVHATSECC*RSVRLQ
Trigger: CTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGT...TGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GAGCAGCAGGCGGCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGGGGAAGAAAGCAGCGTaGACCGAGACTGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: EQQAAGVPGMSVLGSELVGKKAA*TETEGW
Trigger: CCAGCCCTCAGTCTCGGTCCACGCTGCTTTCTTCCC...CACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCGCCTGCTGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp ATGCCAGTGGGAGGACGGCAGGATGGCAGCCCAGGCCACGTGGCGTGGACCCTGGGGAAGAAAGCAGCGTaGACCGAGACTGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: MPVGGRQDGSPGHVAWTLGKKAA*TETEGW
Trigger: CCAGCCCTCAGTCTCGGTCCACGCTGCTTTCTTCCC...CAGGGTCCACGCCACGTGGCCTGGGCTGCCATCCTGCCGTCCTCCCACTGGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp TCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGGCGGCGGGGGCTAGTCCATGTCTCGTaGGACCCCCAAAGCCGTCCC +
Preference number: 4 (lower is better)
Translates to: SRRSPEMGSLGGSSRRRGLVHVS*DPQSRP
Trigger: GGGACGGCTTTGGGGGTCCCACGAGACATGGACTAG...CCCCCGCCGCCTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GGCGGCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACATTGCCAGGATGCCAGTaGGAGGACGGCAGGATGGCA +
Preference number: 4 (lower is better)
Translates to: GGGGSRHVCAGLGARARTLPGCQ*EDGRMA
Trigger: TGCCATCCTGCCGTCCTCCCACTGGCATCCTGGCAA...TGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp AGGATGGCAGCCCAGGCCACGTGGCGTGGACCCTGCGTAGGAGGCTGCAGGAAGCATCTGCGGCTGGGGTaGCGGAACCGCTCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: RMAAQATWRGPCVGGCRKHLRLG*RNRSEG
Trigger: TCCTTCAGAGCGGTTCCGCCACCCCAGCCGCAGATG...CTTCCTGCAGCCTCCTACGCAGGGTCCACGCCACGTGGCCTGGGCTGCCATCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GCCGCCCAGGAAAAGCAACGCCCCCTTGCCAGGATGCCAGTGGGAGGACGGCAGCCAAACATCTGCGGCTaGGGTGGCGGAACCGCTCTG +
Preference number: 4 (lower is better)
Translates to: AAQEKQRPLARMPVGGRQPNICG*GGGTAL
Trigger: CAGAGCGGTTCCGCCACCCCAGCCGCAGATGTTTGG...CTGCCGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGGGCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000591598.5
ENST00000613122.5
3UTR CAA 72 bp GCTCACATGAGGTCGTTGAGCTCCGCCTCCAGCGCCTaGGCCATCTCGTCGGCCTCGGAGCTGCTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: AHMRSLSSASSA*AISSASELLPS
Trigger: TGAGGGCAGCAGCTCCGAGGCCGACGAGATGGCCAAGGCGCTGGAGGCGGAGCTCAACGACCTCATGTGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
CDS-3UTR TCA 90 bp TGGGAGGACGGCAGGATGGCAGCCCAGGCCACGTGGCGTGGACCCTGCGTAGGAGGTCCAAGTCCACCATaGGCACCAGCTTCCGGTTTC +
Preference number: 4 (lower is better)
Translates to: WEDGRMAAQATWRGPCVGGPSPP*APASGF
Trigger: GAAACCGGAAGCTGGTGCTCATGGTGGACTTGGACC...TCCTACGCAGGGTCCACGCCACGTGGCCTGGGCTGCCATCCTGCCGTCCTCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp ATGCCAGTGGGAGGACGGCAGGATGGCAGCCCAGGCCACGTGGCGTGGACCCTGGGTCCAAGTCCACCATaGGCACCAGCTTCCGGTTTC +
Preference number: 4 (lower is better)
Translates to: MPVGGRQDGSPGHVAWTLGPSPP*APASGF
Trigger: GAAACCGGAAGCTGGTGCTCATGGTGGACTTGGACC...CAGGGTCCACGCCACGTGGCCTGGGCTGCCATCCTGCCGTCCTCCCACTGGCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp GAGCAGCAGGCGGCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGGGTCCAAGTCCACCATaGGCACCAGCTTCCGGTTTC +
Preference number: 4 (lower is better)
Translates to: EQQAAGVPGMSVLGSELVGPSPP*APASGF
Trigger: GAAACCGGAAGCTGGTGCTCATGGTGGACTTGGACC...CACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCGCCTGCTGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp GGCCGCCCAGGAAAAGCAACGCCCCCTTGCCAGGATGCCAGTGGGAGGACGGCACCAGCACCTTGCTCTTaGGCTCCGGCACGATCTTGC +
Preference number: 4 (lower is better)
Translates to: GRPGKATPPCQDASGRTAPAPCS*APARSC
Trigger: GCAAGATCGTGCCGGAGCTCAAGAGCAAGGTGCTGG...TGCCGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGGGCGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp AAAACACACCAACCCGCCCCTTACCGAGACAGCGGGCGCACCAGCCTGGGCCACTCAGCACCAGCCGAGTaGGGATCTTCGCTCCCAGCG +
Preference number: 4 (lower is better)
Translates to: KTHQPAPYRDSGRTSLGHSAPAE*GSSLPA
Trigger: CGCTGGGAGCGAAGATCCTCACTCGGCTGGTGCTGA...GTGGCCCAGGCTGGTGCGCCCGCTGTCTCGGTAAGGGGCGGGTTGGTGTGTTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp CTGAGGGCTGGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGCTCTGTGCCTTGGTGTaGTCGTCCCTGAGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: LRAGPGTSECCWRSVRLQLCALV*SSLSGK
Trigger: CTTCCCGCTCAGGGACGATCACACCAAGGCACAGAG...CTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACCAGCCCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp TCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGGCGGCGGGGGCACGTGAGCCTCTGCTaGGCTCTTTGGCACAGCACA +
Preference number: 4 (lower is better)
Translates to: SRRSPEMGSLGGSSRRRGHVSLC*ALWHST
Trigger: TGTGCTGTGCCAAAGAGCTCAGCAGAGGCTCACGTG...CCCCCGCCGCCTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp GCTCCAGGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGCCAGCCTGGGCCACGTaGGCCTCTGCTGAGCTCTTT +
Preference number: 4 (lower is better)
Translates to: APGCPTVTAFPGNGFPRRPAWAT*ASAELF
Trigger: AAAGAGCTCAGCAGAGGCTCACGTGGCCCAGGCTGG...CCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp AGAAAGCAGCGTGGACCGAGACTGAGGGCTGGTCCGGGGACGTCCGAGTGCTGCAACTCCGGCACGCTGTaGACCATGGACACGGTCGCC +
Preference number: 4 (lower is better)
Translates to: RKQRGPRLRAGPGTSECCNSGTL*TMDTVA
Trigger: GGCGACCGTGTCCATGGTGCACAGCGTGCCGGAGTT...GCAGCACTCGGACGTCCCCGGACCAGCCCTCAGTCTCGGTCCACGCTGCTTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp CTTCAGTCCCTGCCCGCTGCCCGCGCTCACATGAGGTCGTTGAGCTCCGCCTCCTCTCCAGGAAGTCCTTaGAGTGTGGACGCAGGCGCG +
Preference number: 4 (lower is better)
Translates to: LQSLPAARAHMRSLSSASSPGSP*SVDAGA
Trigger: CGCGCCTGCGTCCACACTGCAAGGACTTCCTGGAGA...GGAGGCGGAGCTCAACGACCTCATGTGAGCGCGGGCAGCGGGCAGGGACTGAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
CDS-3UTR GCA 90 bp GCCCAGGCCACGTGGCGTGGACCCTGCGTAGGAGGCTGCAGGAAGCTCCAGGCTCCGAAGGTGAAGACGTaGAGCTCGTACAGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: AQATWRGPCVGGCRKLQAPKVKT*SSYSLA
Trigger: CGCCAAGCTGTACGAGCTGCACGTCTTCACCTTCGG...AGCCTGGAGCTTCCTGCAGCCTCCTACGCAGGGTCCACGCCACGTGGCCTGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp CAGGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCGCCTGCGATGGTGTGTaGGTACAGCCGGCTGCCGAA +
Preference number: 4 (lower is better)
Translates to: QAARQSRRSPEMGSLGGSACDGV*VQPAAE
Trigger: TTCGGCAGCCGGCTGTACGCACACACCATCGCAGGC...GCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp ACTGAGGGCTGGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGCTTCTCCAGGCCATTaGTGGGCTCCACTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: TEGWSGDVRVLLEVGQASASPGH*WAPLQG
Trigger: CCCCTGGAGTGGAGCCCAGCAATGGCCTGGAGAAGC...TGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACCAGCCCTCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGGGCTTCTCCAGGCCATTaGTGGGCTCCACTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: ARQSRRSPEMGSLGGSSRASPGH*WAPLQG
Trigger: CCCCTGGAGTGGAGCCCAGCAATGGCCTGGAGAAGC...CCTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp AGGCCGCCCAGGAAAAGCAACGCCCCCTTGCCAGGATGCCAGTGGGAGGACGGCGCCGTTCAGCTCCCGTaGAGGCTTCTCCAGGCCATT +
Preference number: 4 (lower is better)
Translates to: RPPRKSNAPLPGCQWEDGAVQLP*RLLQAI
Trigger: AATGGCCTGGAGAAGCCTGCACGGGAGCTGAACGGC...GCCGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGGGCGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTCCTGCCCTCGGACTCACTaGTGCTCTCGCTGTCGCTGG +
Preference number: 4 (lower is better)
Translates to: GGSRHVCAGLGARARTLSCPRTH*CSRCRW
Trigger: CCAGCGACAGCGAGAGCAGCAGTGAGTCCGAGGGCA...GGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GCTGCCCTCATCCTCGTTGCTGGACTCCCTGCTGGACTCGCTGGCGGCGTCCTCAGGAGGAGGACTTCGTaGCCTCGGACTCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: AALILVAGLPAGLAGGVLRRRTS*PRTHCC
Trigger: GCAGCAGTGAGTCCGAGGGCACGAAGTCCTCCTCCT...GAGGACGCCGCCAGCGAGTCCAGCAGGGAGTCCAGCAACGAGGATGAGGGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
CDS-3UTR GCA 90 bp GTCTCGTGGGACCCCCAAAGCCGTCCCCTAAGGAATGTGCTCTGGTACACAAGGTCCGGGGAGACTCGGTaGTGCAGGCCGCCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: VSWDPQSRPLRNVLWYTRSGETR*CRPPRL
Trigger: GAGCCGGGGCGGCCTGCAGCACCGAGTCTCCCCGGA...CCTTGTGTACCAGAGCACATTCCTTAGGGGACGGCTTTGGGGGTCCCACGAGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp ACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCCCGCTGCCCGCGTGTCCGCACTCCTGTaGCTGCAGCACCTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: TSECCWRSVRLQSLPAARVSALL*LQHLLC
Trigger: ACAGAGAAGGTGCTGCAGGCACAGGAGTGCGGACAC...GCGGGCAGCGGGCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GCCGCCCAGGAAAAGCAACGCCCCCTTGCCAGGATGCCAGTGGGAGGACGGCAGCTGAGCGGGAAGAGCTaGTCCTCCACCTTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: AAQEKQRPLARMPVGGRQLSGKS*SSTLSQ
Trigger: CTGGGACAAGGTGGAGGAGCAGCTCTTCCCGCTCAG...CTGCCGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGGGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp AAGAAAGCAGCGTGGACCGAGACTGAGGGCTGGTCCGGGGACGTCCGAGTGCTGCGTTGCTGGACTCCCTaGTGGACTCGCTGGCGGCGT +
Preference number: 4 (lower is better)
Translates to: KKAAWTETEGWSGDVRVLRCWTP*WTRWRR
Trigger: ACGCCGCCAGCGAGTCCAGCAGGGAGTCCAGCAACG...CAGCACTCGGACGTCCCCGGACCAGCCCTCAGTCTCGGTCCACGCTGCTTTCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp TGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGTCAGGCTTCAGTCCCTaGCCGCTGCCCGCGCTCACA +
Preference number: 4 (lower is better)
Translates to: CPTVTAFPGNGFPRREQQSGFSP*PLPALT
Trigger: TGTGAGCGCGGGCAGCGGGCAGGGACTGAAGCCTGA...CTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp AGGTCGTTGAGCTCCGCCTCCAGCGCCTTGGCCATCTCGTCGGCCTCGGAGCTGTGGGCTCGGAGCTCGTaGACGCACACTGTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: RSLSSASSALAISSASELWARSS*THTVLL
Trigger: AAGCAGGACAGTGTGCGTGCACGAGCTCCGAGCCCA...CAGCTCCGAGGCCGACGAGATGGCCAAGGCGCTGGAGGCGGAGCTCAACGACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
CDS-3UTR GCA 90 bp CTGGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCTTCCAGGCATGTCTGTaGTGGGCTCGGAGCTCGTGC +
Preference number: 4 (lower is better)
Translates to: LVRGRPSAAGGRSGFSPCFQACL*WARSSC
Trigger: GCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAA...GCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp CTGGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCAAAGCAACGCCCCCTTaGCAGGATGCCAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LVRGRPSAAGGRSGFSPCKATPP*QDASGR
Trigger: CCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTT...GCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GCTCCAGGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGCACGCTGTGCACCATaGACACGGTCGCCGTGGACA +
Preference number: 4 (lower is better)
Translates to: APGCPTVTAFPGNGFPRRARCAP*TRSPWT
Trigger: TGTCCACGGCGACCGTGTCCATGGTGCACAGCGTGC...CCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp TGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCCCGCTGCCCGCGCTCACATGAGGAAGGAAGAGGGCTCCTaGCGGATGGGTAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: CWRSVRLQSLPAARAHMRKEEGS*RMGREL
Trigger: CAGCTCCCTACCCATCCGCCAGGAGCCCTCTTCCTT...CCTCATGTGAGCGCGGGCAGCGGGCAGGGACTGAAGCCTGACCGACCTCCAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
CDS-3UTR CCA 90 bp GTCTCGTGGGACCCCCAAAGCCGTCCCCTAAGGAATGTGCTCTGGTACACAAGGTCCTCTTGTGGCCTCTaGGCCCCCGGCCCCCTGCCG +
Preference number: 4 (lower is better)
Translates to: VSWDPQSRPLRNVLWYTRSSCGL*APGPLP
Trigger: CGGCAGGGGGCCGGGGGCCCAGAGGCCACAAGAGGA...CCTTGTGTACCAGAGCACATTCCTTAGGGGACGGCTTTGGGGGTCCCACGAGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000613122.5
CDS-3UTR CCA 90 bp CTGAGGGCTGGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGCCCTGCTGGACTCGCTaGCGGCGTCCTCTTCATTCA +
Preference number: 4 (lower is better)
Translates to: LRAGPGTSECCWRSVRLQPCWTR*RRPLHS
Trigger: TGAATGAAGAGGACGCCGCCAGCGAGTCCAGCAGGG...CTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACCAGCCCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GGCCGCCCAGGAAAAGCAACGCCCCCTTGCCAGGATGCCAGTGGGAGGACGGCACCCTGCTGGACTCGCTaGCGGCGTCCTCTTCATTCA +
Preference number: 4 (lower is better)
Translates to: GRPGKATPPCQDASGRTAPCWTR*RRPLHS
Trigger: TGAATGAAGAGGACGCCGCCAGCGAGTCCAGCAGGG...TGCCGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGGGCGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTCAGGCATGTCTGTGCTaGGCTCGGAGCTCGTGCACG +
Preference number: 4 (lower is better)
Translates to: AGVPGMSVLGSELVHAHCQACLC*ARSSCT
Trigger: CGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTG...ACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp AAAACACACCAACCCGCCCCTTACCGAGACAGCGGGCGCACCAGCCTGGGCCACCATCTGCGGCTGGGGTaGCGGAACCGCTCTGAAGGA +
Preference number: 4 (lower is better)
Translates to: KTHQPAPYRDSGRTSLGHHLRLG*RNRSEG
Trigger: TCCTTCAGAGCGGTTCCGCCACCCCAGCCGCAGATG...GTGGCCCAGGCTGGTGCGCCCGCTGTCTCGGTAAGGGGCGGGTTGGTGTGTTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp CTTCAGTCCCTGCCCGCTGCCCGCGCTCACATGAGGTCGTTGAGCTCCGCCTCCCACACAGGCCTTTCATaGCAACCGGGTGGCTGCATC +
Preference number: 4 (lower is better)
Translates to: LQSLPAARAHMRSLSSASHTGLS*QPGGCI
Trigger: GATGCAGCCACCCGGTTGTCATGAAAGGCCTGTGTG...GGAGGCGGAGCTCAACGACCTCATGTGAGCGCGGGCAGCGGGCAGGGACTGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
CDS-3UTR TCA 90 bp CCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGGCGCTCTGTGCCTTGGTGTaGTCGTCCCTGAGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: PTVTAFPGNGFPRREQQALCALV*SSLSGK
Trigger: CTTCCCGCTCAGGGACGATCACACCAAGGCACAGAG...CGCCTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp AGGCCGCCCAGGAAAAGCAACGCCCCCTTGCCAGGATGCCAGTGGGAGGACGGCCACGTGAGCCTCTGCTaGGCTCTTTGGCACAGCACA +
Preference number: 4 (lower is better)
Translates to: RPPRKSNAPLPGCQWEDGHVSLC*ALWHST
Trigger: TGTGCTGTGCCAAAGAGCTCAGCAGAGGCTCACGTG...GCCGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGGGCGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp CAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTCCTGCTTAAAGGTCGGTACGGGGCCTaGGCTGCGCTCAGAGCGCAG +
Preference number: 4 (lower is better)
Translates to: QACLCWARSSCTHTVLLKGRYGA*AALRAQ
Trigger: CTGCGCTCTGAGCGCAGCGCAGGCCCCGTACCGACC...TTTAAGCAGGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000613122.5
CDS-3UTR GCA 90 bp ACACCAACCCGCCCCTTACCGAGACAGCGGGCGCACCAGCCTGGGCCACGTGAGAGCTTCCGGTTTCGGTaGAGTCGCTGCTGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: TPTRPLPRQRAHQPGPRESFRFR*SRCWSS
Trigger: AGAAGACCAGCAGCGACTGCACCGAAACCGGAAGCT...CTCACGTGGCCCAGGCTGGTGCGCCCGCTGTCTCGGTAAGGGGCGGGTTGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp AAAGGCCGCCCAGGAAAAGCAACGCCCCCTTGCCAGGATGCCAGTGGGAGGACGGCCTGCGATGGTGTGTaGGTACAGCCGGCTGCCGAA +
Preference number: 4 (lower is better)
Translates to: KGRPGKATPPCQDASGRTACDGV*VQPAAE
Trigger: TTCGGCAGCCGGCTGTACGCACACACCATCGCAGGC...CGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGGGCGGCCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp CACGTGGCGTGGACCCTGCGTAGGAGGCTGCAGGAAGCTCCAGGCTGCCCGACACCTCGGACTCACTGCTaGTCTCGCTGTCGCTGGATA +
Preference number: 4 (lower is better)
Translates to: HVAWTLRRRLQEAPGCPTPRTHC*SRCRWI
Trigger: TATCCAGCGACAGCGAGAGCAGCAGTGAGTCCGAGG...TGTCGGGCAGCCTGGAGCTTCCTGCAGCCTCCTACGCAGGGTCCACGCCACGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTAGGAGGAGGACTTCGTaGCCTCGGACTCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: AGVPGMSVLGSELVHAHCRRRTS*PRTHCC
Trigger: GCAGCAGTGAGTCCGAGGGCACGAAGTCCTCCTCCT...ACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTCCTGCTTAAACTCCAGGGAACTGCCCTGTaGCAGCGCCCCGGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: ACLCWARSSCTHTVLLKLQGTAL*QRPGSL
Trigger: GAGGGAGCCGGGGCGCTGGCACAGGGCAGTTCCCTG...GAGTTTAAGCAGGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GTCCTGCTTAAACTCCTAGTCCATGTCTCGTGGGACCCCCAAAGCCGTCCCCTACCGGCTCCAGGGAACTaGCCTGTGCCAGCGCCCCGG +
Preference number: 4 (lower is better)
Translates to: VLLKLLVHVSWDPQSRPLPAPGN*PVPAPR
Trigger: CCGGGGCGCTGGCACAGGGCAGTTCCCTGGAGCCGG...TAGGGGACGGCTTTGGGGGTCCCACGAGACATGGACTAGGAGTTTAAGCAGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GAAGCTCCAGGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGGCAGCACCTTCTCTGTaGCAGCTCGCGCGGCGATCA +
Preference number: 4 (lower is better)
Translates to: EAPGCPTVTAFPGNGFPRAAPSL*QLARRS
Trigger: TGATCGCCGCGCGAGCTGGCACAGAGAAGGTGCTGC...CCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTGGAGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp CCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGGCGCTGAGCGGGAAGAGCTaGTCCTCCACCTTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: PTVTAFPGNGFPRREQQALSGKS*SSTLSQ
Trigger: CTGGGACAAGGTGGAGGAGCAGCTCTTCCCGCTCAG...CGCCTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GCTGGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGTGCCCTCATCCTCGTTaGTGGACTCCCTGCTGGACT +
Preference number: 4 (lower is better)
Translates to: AGPGTSECCWRSVRLQSLCPHPR*WTPCWT
Trigger: AGTCCAGCAGGGAGTCCAGCAACGAGGATGAGGGCA...CAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTCCTGGGGACGTCCGAGTGCTaGTGGAGGTCGGTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: GFQACLCWARSSCTHTVLGTSEC*WRSVRL
Trigger: AAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCC...CAGGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp AAAGGCCGCCCAGGAAAAGCAACGCCCCCTTGCCAGGATGCCAGTGGGAGGACGCAGGAAGCTCCAGGCTaGCCGACAGTCACGGCGTTC +
Preference number: 4 (lower is better)
Translates to: KGRPGKATPPCQDASGRTQEAPG*PTVTAF
Trigger: GAACGCCGTGACTGTCGGGCAGCCTGGAGCTTCCTG...CGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGGGCGGCCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp AAAGGCCGCCCAGGAAAAGCAACGCCCCCTTGCCAGGATGCCAGTGGGAGGACGACGTGGCGTGGACCCTaGGTAGGAGGCTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: KGRPGKATPPCQDASGRTTWRGP*VGGCRK
Trigger: CTTCCTGCAGCCTCCTACGCAGGGTCCACGCCACGT...CGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGGGCGGCCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GAAGCTCCAGGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGACGTGGCGTGGACCCTaGGTAGGAGGCTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: EAPGCPTVTAFPGNGFPRTWRGP*VGGCRK
Trigger: CTTCCTGCAGCCTCCTACGCAGGGTCCACGCCACGT...CCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTGGAGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp ACTGAGGGCTGGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAAAAGCAACGCCCCCTTaGCAGGATGCCAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: TEGWSGDVRVLLEVGQASKATPP*QDASGR
Trigger: CCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTT...TGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACCAGCCCTCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp CTGGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCTCTTCACCAAACATCTaGGGCTGGGGTGGCGGAACC +
Preference number: 4 (lower is better)
Translates to: LVRGRPSAAGGRSGFSPCSSPNI*GWGGGT
Trigger: GGTTCCGCCACCCCAGCCGCAGATGTTTGGTGAAGA...GCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GCCGCCCAGGAAAAGCAACGCCCCCTTGCCAGGATGCCAGTGGGAGGACGGCAGTCTTCACCAAACATCTaGGGCTGGGGTGGCGGAACC +
Preference number: 4 (lower is better)
Translates to: AAQEKQRPLARMPVGGRQSSPNI*GWGGGT
Trigger: GGTTCCGCCACCCCAGCCGCAGATGTTTGGTGAAGA...CTGCCGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGGGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp CGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCCCGCTGCCCGCGTTCATGACAACCGGGTaGCTGCATCCTTCCAACCTC +
Preference number: 4 (lower is better)
Translates to: RPSAAGGRSGFSPCPLPAFMTTG*LHPSNL
Trigger: GAGGTTGGAAGGATGCAGCCACCCGGTTGTCATGAA...CGCGGGCAGCGGGCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp CTGAGGGCTGGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGCGGTGCAGTCGCTGCTaGTCTTCTCTTCCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: LRAGPGTSECCWRSVRLQRCSRC*SSLPSC
Trigger: ACAGCTGGGAAGAGAAGACCAGCAGCGACTGCACCG...CTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACCAGCCCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp ACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGGCGGCGGAAGTCCTTGCAGTGTaGACGCAGGCGCGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: TVTAFPGNGFPRREQQAAEVLAV*TQARVQ
Trigger: CTGCACACGCGCCTGCGTCCACACTGCAAGGACTTC...CGCCGCCTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp CAGGCGGCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACTAAAAAGCCTGCGATaGTGTGTGCGTACAGCCGGC +
Preference number: 4 (lower is better)
Translates to: QAAGVPGMSVLGSELVHALKSLR*CVRTAG
Trigger: GCCGGCTGTACGCACACACCATCGCAGGCTTTTTAG...TGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GGCGGCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTAAAAAGCCTGCGATaGTGTGTGCGTACAGCCGGC +
Preference number: 4 (lower is better)
Translates to: GGGGSRHVCAGLGARARTLKSLR*CVRTAG
Trigger: GCCGGCTGTACGCACACACCATCGCAGGCTTTTTAG...TGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTCCTGTCTCCAGGCCATTGCTaGGCTCCACTCCAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: GFQACLCWARSSCTHTVLSPGHC*APLQGP
Trigger: AGGCCCCTGGAGTGGAGCCCAGCAATGGCCTGGAGA...CAGGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp ACTGAGGGCTGGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGGGAAGAAAGCAGCGTaGACCGAGACTGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TEGWSGDVRVLLEVGQASGKKAA*TETEGW
Trigger: CCAGCCCTCAGTCTCGGTCCACGCTGCTTTCTTCCC...TGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACCAGCCCTCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTCCTGCTTAAACTCGGGAGGACGGCAGGATaGCAGCCCAGGCCACGTGGC +
Preference number: 4 (lower is better)
Translates to: ACLCWARSSCTHTVLLKLGRTAG*QPRPRG
Trigger: GCCACGTGGCCTGGGCTGCCATCCTGCCGTCCTCCC...GAGTTTAAGCAGGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp CATGAGGTCGTTGAGCTCCGCCTCCAGCGCCTTGGCCATCTCGTCGGCCTCGGATTGCCAGGATGCCAGTaGGAGGACGGCAGGATGGCA +
Preference number: 4 (lower is better)
Translates to: HEVVELRLQRLGHLVGLGLPGCQ*EDGRMA
Trigger: TGCCATCCTGCCGTCCTCCCACTGGCATCCTGGCAA...TCCGAGGCCGACGAGATGGCCAAGGCGCTGGAGGCGGAGCTCAACGACCTCATG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
CDS-3UTR CCA 90 bp ACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGGCGGCGTTGCCAGGATGCCAGTaGGAGGACGGCAGGATGGCA +
Preference number: 4 (lower is better)
Translates to: TVTAFPGNGFPRREQQAALPGCQ*EDGRMA
Trigger: TGCCATCCTGCCGTCCTCCCACTGGCATCCTGGCAA...CGCCGCCTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp CATGAGGTCGTTGAGCTCCGCCTCCAGCGCCTTGGCCATCTCGTCGGCCTCGGACACACAGGCCTTTCATaGCAACCGGGTGGCTGCATC +
Preference number: 4 (lower is better)
Translates to: HEVVELRLQRLGHLVGLGHTGLS*QPGGCI
Trigger: GATGCAGCCACCCGGTTGTCATGAAAGGCCTGTGTG...TCCGAGGCCGACGAGATGGCCAAGGCGCTGGAGGCGGAGCTCAACGACCTCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
CDS-3UTR TCA 90 bp ACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGGCGGCGCACACAGGCCTTTCATaGCAACCGGGTGGCTGCATC +
Preference number: 4 (lower is better)
Translates to: TVTAFPGNGFPRREQQAAHTGLS*QPGGCI
Trigger: GATGCAGCCACCCGGTTGTCATGAAAGGCCTGTGTG...CGCCGCCTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp GGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCCCGCTGCTACTCTGCAACTGGGTaGGGTCTTGGCCACATTCAG +
Preference number: 4 (lower is better)
Translates to: GDVRVLLEVGQASVPARCYSATG*GLGHIQ
Trigger: CTGAATGTGGCCAAGACCTCACCCAGTTGCAGAGTA...GCAGCGGGCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp GCCCAGGCCACGTGGCGTGGACCCTGCGTAGGAGGCTGCAGGAAGCTCCAGGCTTACTCTGCAACTGGGTaGGGTCTTGGCCACATTCAG +
Preference number: 4 (lower is better)
Translates to: AQATWRGPCVGGCRKLQAYSATG*GLGHIQ
Trigger: CTGAATGTGGCCAAGACCTCACCCAGTTGCAGAGTA...AGCCTGGAGCTTCCTGCAGCCTCCTACGCAGGGTCCACGCCACGTGGCCTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp GGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCCCGCTGCACTTTCTTTCTCGTCTaGGATTCTCGGGACCCAGGG +
Preference number: 4 (lower is better)
Translates to: GDVRVLLEVGQASVPARCTFFLV*DSRDPG
Trigger: CCCTGGGTCCCGAGAATCTCAGACGAGAAAGAAAGT...GCAGCGGGCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp AAAACACACCAACCCGCCCCTTACCGAGACAGCGGGCGCACCAGCCTGGGCCACGTGGACAGCGGCACCTaGTGCTTCCCGTTCTTACTC +
Preference number: 4 (lower is better)
Translates to: KTHQPAPYRDSGRTSLGHVDSGT*CFPFLL
Trigger: GAGTAAGAACGGGAAGCAGCAGGTGCCGCTGTCCAC...GTGGCCCAGGCTGGTGCGCCCGCTGTCTCGGTAAGGGGCGGGTTGGTGTGTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp CAGGCTTCAGTCCCTGCCCGCTGCCCGCGCTCACATGAGGTCGTTGAGCTCCGCTTTCGGTGCAGTCGCTaGTGGTCTTCTCTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: QASVPARCPRSHEVVELRFRCSR*WSSLPS
Trigger: GCTGGGAAGAGAAGACCAGCAGCGACTGCACCGAAA...GCGGAGCTCAACGACCTCATGTGAGCGCGGGCAGCGGGCAGGGACTGAAGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
CDS-3UTR GCA 90 bp GCTGGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGTTTCGGTGCAGTCGCTaGTGGTCTTCTCTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: AGPGTSECCWRSVRLQSLFRCSR*WSSLPS
Trigger: GCTGGGAAGAGAAGACCAGCAGCGACTGCACCGAAA...CAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp TGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGTCTCCAGGAAGTCCTTaGAGTGTGGACGCAGGCGCG +
Preference number: 4 (lower is better)
Translates to: CPTVTAFPGNGFPRREQQSPGSP*SVDAGA
Trigger: CGCGCCTGCGTCCACACTGCAAGGACTTCCTGGAGA...CTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCCGAAGGTGAAGACGTaGAGCTCGTACAGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: GCPTVTAFPGNGFPRREQPKVKT*SSYSLA
Trigger: CGCCAAGCTGTACGAGCTGCACGTCTTCACCTTCGG...CTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GCTCCAGGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGCCTCGGACTCACTGCTaGTCTCGCTGTCGCTGGATA +
Preference number: 4 (lower is better)
Translates to: APGCPTVTAFPGNGFPRRPRTHC*SRCRWI
Trigger: TATCCAGCGACAGCGAGAGCAGCAGTGAGTCCGAGG...CCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp AAGAAAGCAGCGTGGACCGAGACTGAGGGCTGGTCCGGGGACGTCCGAGTGCTGAGGAGGAGGACTTCGTaGCCTCGGACTCACTGCTGC +
Preference number: 4 (lower is better)
Translates to: KKAAWTETEGWSGDVRVLRRRTS*PRTHCC
Trigger: GCAGCAGTGAGTCCGAGGGCACGAAGTCCTCCTCCT...CAGCACTCGGACGTCCCCGGACCAGCCCTCAGTCTCGGTCCACGCTGCTTTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp CACCAACCCGCCCCTTACCGAGACAGCGGGCGCACCAGCCTGGGCCACGTGAGCAATTATGGCCACGTCTaGCAGCACCTTGCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: HQPAPYRDSGRTSLGHVSNYGHV*QHLALE
Trigger: CTCAAGAGCAAGGTGCTGGCAGACGTGGCCATAATT...GCTCACGTGGCCCAGGCTGGTGCGCCCGCTGTCTCGGTAAGGGGCGGGTTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp AAGAAAGCAGCGTGGACCGAGACTGAGGGCTGGTCCGGGGACGTCCGAGTGCTGCCGCACTCCTGTGCCTaGAGCACCTTCTCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: KKAAWTETEGWSGDVRVLPHSCA*STFSVP
Trigger: TGGCACAGAGAAGGTGCTGCAGGCACAGGAGTGCGG...CAGCACTCGGACGTCCCCGGACCAGCCCTCAGTCTCGGTCCACGCTGCTTTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp CTCCAGGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGTCAGGGTTGACCACGTaGAGGTGTCCGCACTCCTGT +
Preference number: 4 (lower is better)
Translates to: LQAARQSRRSPEMGSLGGSGLTT*RCPHSC
Trigger: ACAGGAGTGCGGACACCTGCACGTGGTCAACCCTGA...CCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GCTGCCCTCATCCTCGTTGCTGGACTCCCTGCTGGACTCGCTGGCGGCGTCCTCGCTGTTCTCCCTCTGTaGCTTGGTGTGATCGTCCCT +
Preference number: 4 (lower is better)
Translates to: AALILVAGLPAGLAGGVLAVLPL*LGVIVP
Trigger: AGGGACGATCACACCAAGGCACAGAGGGAGAACAGC...GAGGACGCCGCCAGCGAGTCCAGCAGGGAGTCCAGCAACGAGGATGAGGGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
CDS-3UTR GCA 90 bp GCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTCCTGCTTAAACTCCCGGGGACGTCCGAGTaGTGCTGGAGGTCGGTCAGG +
Preference number: 4 (lower is better)
Translates to: ACLCWARSSCTHTVLLKLPGTSE*CWRSVR
Trigger: CCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGG...GAGTTTAAGCAGGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp AAGAAAGCAGCGTGGACCGAGACTGAGGGCTGGTCCGGGGACGTCCGAGTGCTGTGGGCTCGGAGCTCGTaGACGCACACTGTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: KKAAWTETEGWSGDVRVLWARSS*THTVLL
Trigger: AAGCAGGACAGTGTGCGTGCACGAGCTCCGAGCCCA...CAGCACTCGGACGTCCCCGGACCAGCCCTCAGTCTCGGTCCACGCTGCTTTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp AAGAAAGCAGCGTGGACCGAGACTGAGGGCTGGTCCGGGGACGTCCGAGTGCTGAAAGCAACGCCCCCTTaGCAGGATGCCAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: KKAAWTETEGWSGDVRVLKATPP*QDASGR
Trigger: CCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTT...CAGCACTCGGACGTCCCCGGACCAGCCCTCAGTCTCGGTCCACGCTGCTTTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp ATGCCAGTGGGAGGACGGCAGGATGGCAGCCCAGGCCACGTGGCGTGGACCCTGAACTGGGTGAGGTCTTaGCCACATTCAGCACACAGG +
Preference number: 4 (lower is better)
Translates to: MPVGGRQDGSPGHVAWTLNWVRS*PHSAHR
Trigger: CCTGTGTGCTGAATGTGGCCAAGACCTCACCCAGTT...CAGGGTCCACGCCACGTGGCCTGGGCTGCCATCCTGCCGTCCTCCCACTGGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp ACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGTGGGACCCCCAAAGCCGTCCCCGGCGATCAGGTGCGTaGCCCTGTCAGGGGCGTCGG +
Preference number: 4 (lower is better)
Translates to: TVLLKLLVHVSWDPQSRPRRSGA*PCQGRR
Trigger: CCGACGCCCCTGACAGGGCCACGCACCTGATCGCCG...GGGACGGCTTTGGGGGTCCCACGAGACATGGACTAGGAGTTTAAGCAGGACAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp CAGGAAGCTCCAGGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTACGTCCGAGTGCTGCTaGAGGTCGGTCAGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: QEAPGCPTVTAFPGNGFPTSECC*RSVRLQ
Trigger: CTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGT...AGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTGGAGCTTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GCCCAGGCCACGTGGCGTGGACCCTGCGTAGGAGGCTGCAGGAAGCTCCAGGCTTTGGCACAGCACACCTaGGCCTTTAACACCTGTCAC +
Preference number: 4 (lower is better)
Translates to: AQATWRGPCVGGCRKLQALAQHT*AFNTCH
Trigger: GTGACAGGTGTTAAAGGCCCAGGTGTGCTGTGCCAA...AGCCTGGAGCTTCCTGCAGCCTCCTACGCAGGGTCCACGCCACGTGGCCTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp CAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTCCTGCTTAAAGCAGCCCAGGCCACGTaGCGTGGACCCTGCGTAGGA +
Preference number: 4 (lower is better)
Translates to: QACLCWARSSCTHTVLLKAAQAT*RGPCVG
Trigger: TCCTACGCAGGGTCCACGCCACGTGGCCTGGGCTGC...TTTAAGCAGGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp CAGGCTTCAGTCCCTGCCCGCTGCCCGCGCTCACATGAGGTCGTTGAGCTCCGCCGGCCCAGCTGGAAGTaGAAGATGCCTTTATTCGAC +
Preference number: 4 (lower is better)
Translates to: QASVPARCPRSHEVVELRRPSWK*KMPLFD
Trigger: GTCGAATAAAGGCATCTTTCACTTCCAGCTGGGCCG...GCGGAGCTCAACGACCTCATGTGAGCGCGGGCAGCGGGCAGGGACTGAAGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
CDS-3UTR TCA 90 bp CACGTGGCGTGGACCCTGCGTAGGAGGCTGCAGGAAGCTCCAGGCTGCCCGACACGGCCCAGCTGGAAGTaGAAGATGCCTTTATTCGAC +
Preference number: 4 (lower is better)
Translates to: HVAWTLRRRLQEAPGCPTRPSWK*KMPLFD
Trigger: GTCGAATAAAGGCATCTTTCACTTCCAGCTGGGCCG...TGTCGGGCAGCCTGGAGCTTCCTGCAGCCTCCTACGCAGGGTCCACGCCACGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp GCTGGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGACTTTCTTTCTCGTCTaGGATTCTCGGGACCCAGGG +
Preference number: 4 (lower is better)
Translates to: AGPGTSECCWRSVRLQSLTFFLV*DSRDPG
Trigger: CCCTGGGTCCCGAGAATCTCAGACGAGAAAGAAAGT...CAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp CGGCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTTCGGGTGTAGCCCACTaGAAATTATGGCCACGTCTG +
Preference number: 4 (lower is better)
Translates to: RRGFQACLCWARSSCTHTSGVAH*KLWPRL
Trigger: CAGACGTGGCCATAATTTTCAGTGGGCTACACCCGA...AGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp GCTCGGAGCTCGTGCACGCACACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGAGCGTGGACCGAGACTaGGGGCTGGTCCGGGGACGT +
Preference number: 4 (lower is better)
Translates to: ARSSCTHTVLLKLLVHVSSVDRD*GLVRGR
Trigger: ACGTCCCCGGACCAGCCCTCAGTCTCGGTCCACGCT...CGAGACATGGACTAGGAGTTTAAGCAGGACAGTGTGCGTGCACGAGCTCCGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp AAAGGCCGCCCAGGAAAAGCAACGCCCCCTTGCCAGGATGCCAGTGGGAGGACGGACAGCGGCACCTGCTaGTTCCCGTTCTTACTCTGC +
Preference number: 4 (lower is better)
Translates to: KGRPGKATPPCQDASGRTDSGTC*FPFLLC
Trigger: GCAGAGTAAGAACGGGAAGCAGCAGGTGCCGCTGTC...CGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGGGCGGCCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp CCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGGCGTTTCGGTGCAGTCGCTaGTGGTCTTCTCTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: PTVTAFPGNGFPRREQQAFRCSR*WSSLPS
Trigger: GCTGGGAAGAGAAGACCAGCAGCGACTGCACCGAAA...CGCCTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp AGCTCGTGCACGCACACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGTGGGACCGCTCGCCCTCCTCCTaGCCACCCAGCTCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: SSCTHTVLLKLLVHVSWDRSPSS*PPSSGS
Trigger: GGAGCCTGAGCTGGGTGGGCAGGAGGAGGGCGAGCG...GTCCCACGAGACATGGACTAGGAGTTTAAGCAGGACAGTGTGCGTGCACGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp AAGAAAGCAGCGTGGACCGAGACTGAGGGCTGGTCCGGGGACGTCCGAGTGCTGGTGTCCGCACTCCTGTaGCTGCAGCACCTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: KKAAWTETEGWSGDVRVLVSALL*LQHLLC
Trigger: ACAGAGAAGGTGCTGCAGGCACAGGAGTGCGGACAC...CAGCACTCGGACGTCCCCGGACCAGCCCTCAGTCTCGGTCCACGCTGCTTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp AAGAAAGCAGCGTGGACCGAGACTGAGGGCTGGTCCGGGGACGTCCGAGTGCTGTCAGGGTTGACCACGTaGAGGTGTCCGCACTCCTGT +
Preference number: 4 (lower is better)
Translates to: KKAAWTETEGWSGDVRVLSGLTT*RCPHSC
Trigger: ACAGGAGTGCGGACACCTGCACGTGGTCAACCCTGA...CAGCACTCGGACGTCCCCGGACCAGCCCTCAGTCTCGGTCCACGCTGCTTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGGGCTGTTCTCCCTCTGTaGCTTGGTGTGATCGTCCCT +
Preference number: 4 (lower is better)
Translates to: ARQSRRSPEMGSLGGSSRAVLPL*LGVIVP
Trigger: AGGGACGATCACACCAAGGCACAGAGGGAGAACAGC...CCTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp CATGAGGTCGTTGAGCTCCGCCTCCAGCGCCTTGGCCATCTCGTCGGCCTCGGATGTCGCTGTCGTCGCTaGCTTCTCCAAGGATGTCGT +
Preference number: 4 (lower is better)
Translates to: HEVVELRLQRLGHLVGLGCRCRR*LLQGCR
Trigger: ACGACATCCTTGGAGAAGGCAGCGACGACAGCGACA...TCCGAGGCCGACGAGATGGCCAAGGCGCTGGAGGCGGAGCTCAACGACCTCATG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000075430.11
CDS-3UTR GCA 90 bp AGAAAGCAGCGTGGACCGAGACTGAGGGCTGGTCCGGGGACGTCCGAGTGCTGCTGTCGCTGTCGTCGCTaGCTTCTCCAAGGATGTCGT +
Preference number: 4 (lower is better)
Translates to: RKQRGPRLRAGPGTSECCCRCRR*LLQGCR
Trigger: ACGACATCCTTGGAGAAGGCAGCGACGACAGCGACA...GCAGCACTCGGACGTCCCCGGACCAGCCCTCAGTCTCGGTCCACGCTGCTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000613122.5
CDS-3UTR GCA 90 bp AAAGGCCGCCCAGGAAAAGCAACGCCCCCTTGCCAGGATGCCAGTGGGAGGACGTGCCCTCATCCTCGTTaGTGGACTCCCTGCTGGACT +
Preference number: 4 (lower is better)
Translates to: KGRPGKATPPCQDASGRTCPHPR*WTPCWT
Trigger: AGTCCAGCAGGGAGTCCAGCAACGAGGATGAGGGCA...CGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGGGCGGCCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp CAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTCCTGCTTAAACGTCGGCCTCGGAGCTaGTGCCCTCATCCTCGTTGC +
Preference number: 4 (lower is better)
Translates to: QACLCWARSSCTHTVLLKRRPRS*CPHPRC
Trigger: GCAACGAGGATGAGGGCAGCAGCTCCGAGGCCGACG...TTTAAGCAGGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp ACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGTGGGACCCCCAAAGCCGTCCCCCGGGGACGTCCGAGTaGTGCTGGAGGTCGGTCAGG +
Preference number: 4 (lower is better)
Translates to: TVLLKLLVHVSWDPQSRPPGTSE*CWRSVR
Trigger: CCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGG...GGGACGGCTTTGGGGGTCCCACGAGACATGGACTAGGAGTTTAAGCAGGACAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp CGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCCCGCTGCCCGCGTTCTTACTCTGCAACTaGGTGAGGTCTTGGCCACAT +
Preference number: 4 (lower is better)
Translates to: RPSAAGGRSGFSPCPLPAFLLCN*VRSWPH
Trigger: ATGTGGCCAAGACCTCACCCAGTTGCAGAGTAAGAA...CGCGGGCAGCGGGCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp CAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTCCTGCTTAAATGGACACGGTCGCCGTaGACAGCGGCACCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: QACLCWARSSCTHTVLLKWTRSP*TAAPAA
Trigger: AGCAGCAGGTGCCGCTGTCCACGGCGACCGTGTCCA...TTTAAGCAGGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp CCCTCATCCTCGTTGCTGGACTCCCTGCTGGACTCGCTGGCGGCGTCCTCTTCACGGTGCAGTCGCTGCTaGTCTTCTCTTCCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: PSSSLLDSLLDSLAASSSRCSRC*SSLPSC
Trigger: ACAGCTGGGAAGAGAAGACCAGCAGCGACTGCACCG...TGAAGAGGACGCCGCCAGCGAGTCCAGCAGGGAGTCCAGCAACGAGGATGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000075430.11
CDS-3UTR CCA 90 bp GAAGCTCCAGGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGCGGTGCAGTCGCTGCTaGTCTTCTCTTCCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: EAPGCPTVTAFPGNGFPRRCSRC*SSLPSC
Trigger: ACAGCTGGGAAGAGAAGACCAGCAGCGACTGCACCG...CCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTGGAGCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp AGCTCGTGCACGCACACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGTGGGACGGCGCGTGTGCAGCATaGGCTCACCCCGGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SSCTHTVLLKLLVHVSWDGACAA*AHPGPA
Trigger: AGCTGGGCCGGGGTGAGCCCATGCTGCACACGCGCC...GTCCCACGAGACATGGACTAGGAGTTTAAGCAGGACAGTGTGCGTGCACGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GAGCAGCAGGCGGCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGTGCTCTCGCTGTCGCTaGATAAGTCAAAGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: EQQAAGVPGMSVLGSELVCSRCR*ISQSPG
Trigger: ACCTGGACTTTGACTTATCCAGCGACAGCGAGAGCA...CACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCGCCTGCTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GTCCTGCTTAAACTCCTAGTCCATGTCTCGTGGGACCCCCAAAGCCGTCCCCTAGGTGGAACAAGGCGGTaGGGGGCACACCCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: VLLKLLVHVSWDPQSRPLGGTRR*GAHPPG
Trigger: ACCGGGAGGGTGTGCCCCCCACCGCCTTGTTCCACC...TAGGGGACGGCTTTGGGGGTCCCACGAGACATGGACTAGGAGTTTAAGCAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTCCTGCTTAAACTCGGCCAGGCTGGGCCTTaGGAAGAACCGGCATCGGGT +
Preference number: 4 (lower is better)
Translates to: ACLCWARSSCTHTVLLKLGQAGP*EEPASG
Trigger: ACCCGATGCCGGTTCTTCCCAAGGCCCAGCCTGGCC...GAGTTTAAGCAGGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GTCTCGTGGGACCCCCAAAGCCGTCCCCTAAGGAATGTGCTCTGGTACACAAGGGGCCAGGCTGGGCCTTaGGAAGAACCGGCATCGGGT +
Preference number: 4 (lower is better)
Translates to: VSWDPQSRPLRNVLWYTRGQAGP*EEPASG
Trigger: ACCCGATGCCGGTTCTTCCCAAGGCCCAGCCTGGCC...CCTTGTGTACCAGAGCACATTCCTTAGGGGACGGCTTTGGGGGTCCCACGAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp ACGCACACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGTGGGACCCCCAAAGCCCTGGCTTCCGGGGCTaGGGCTCCTCCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: THTVLLKLLVHVSWDPQSPGFRG*GSSSCS
Trigger: GGAGCAGGAGGAGGAGCCCCAGCCCCGGAAGCCAGG...GCTTTGGGGGTCCCACGAGACATGGACTAGGAGTTTAAGCAGGACAGTGTGCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000613122.5
CDS-3UTR CCA 90 bp CACGTGGCGTGGACCCTGCGTAGGAGGCTGCAGGAAGCTCCAGGCTGCCCGACATTGGCACAGCACACCTaGGCCTTTAACACCTGTCAC +
Preference number: 4 (lower is better)
Translates to: HVAWTLRRRLQEAPGCPTLAQHT*AFNTCH
Trigger: GTGACAGGTGTTAAAGGCCCAGGTGTGCTGTGCCAA...TGTCGGGCAGCCTGGAGCTTCCTGCAGCCTCCTACGCAGGGTCCACGCCACGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp ACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGTGGGACCCCCAAAGCCGTCCCGCAGCCCAGGCCACGTaGCGTGGACCCTGCGTAGGA +
Preference number: 4 (lower is better)
Translates to: TVLLKLLVHVSWDPQSRPAAQAT*RGPCVG
Trigger: TCCTACGCAGGGTCCACGCCACGTGGCCTGGGCTGC...GGGACGGCTTTGGGGGTCCCACGAGACATGGACTAGGAGTTTAAGCAGGACAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp AGAAAGCAGCGTGGACCGAGACTGAGGGCTGGTCCGGGGACGTCCGAGTGCTGCTGCTGCTCGGTTGTGTaGATCAACGTCTGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: RKQRGPRLRAGPGTSECCCCSVV*INVWSK
Trigger: CTTGGACCAGACGTTGATTCACACAACCGAGCAGCA...GCAGCACTCGGACGTCCCCGGACCAGCCCTCAGTCTCGGTCCACGCTGCTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp ACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGGCGGCGTGCTGCTCGGTTGTGTaGATCAACGTCTGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: TVTAFPGNGFPRREQQAACCSVV*INVWSK
Trigger: CTTGGACCAGACGTTGATTCACACAACCGAGCAGCA...CGCCGCCTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp GCTCCAGGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGCGGCCCAGCTGGAAGTaGAAGATGCCTTTATTCGAC +
Preference number: 4 (lower is better)
Translates to: APGCPTVTAFPGNGFPRRRPSWK*KMPLFD
Trigger: GTCGAATAAAGGCATCTTTCACTTCCAGCTGGGCCG...CCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp CCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGGCGCCTCGATCTCCTTGTTaGGGTAGCGGTCATACTTGG +
Preference number: 4 (lower is better)
Translates to: PTVTAFPGNGFPRREQQAPRSPC*GSGHTW
Trigger: CCAAGTATGACCGCTACCTCAACAAGGAGATCGAGG...CGCCTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp AGCTCGTGCACGCACACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGTGGGACTCCTTGTCCGGGGCATaGGCGCCAGGCTCGGCCTCT +
Preference number: 4 (lower is better)
Translates to: SSCTHTVLLKLLVHVSWDSLSGA*APGSAS
Trigger: AGAGGCCGAGCCTGGCGCGCATGCCCCGGACAAGGA...GTCCCACGAGACATGGACTAGGAGTTTAAGCAGGACAGTGTGCGTGCACGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp ACGCACACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGTGGGACCCCCAAAGCTCCTTGTCCGGGGCATaGGCGCCAGGCTCGGCCTCT +
Preference number: 4 (lower is better)
Translates to: THTVLLKLLVHVSWDPQSSLSGA*APGSAS
Trigger: AGAGGCCGAGCCTGGCGCGCATGCCCCGGACAAGGA...GCTTTGGGGGTCCCACGAGACATGGACTAGGAGTTTAAGCAGGACAGTGTGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GCTCGGAGCTCGTGCACGCACACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGGCTCCGGCACGATCTTaGGGATGTCCGGCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: ARSSCTHTVLLKLLVHVSAPARS*GCPAPP
Trigger: AGGAGGCGCCGGACATCCGCAAGATCGTGCCGGAGC...CGAGACATGGACTAGGAGTTTAAGCAGGACAGTGTGCGTGCACGAGCTCCGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp AGGATGGCAGCCCAGGCCACGTGGCGTGGACCCTGCGTAGGAGGCTGCAGGAAGAATTATGGCCACGTCTaGCAGCACCTTGCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: RMAAQATWRGPCVGGCRKNYGHV*QHLALE
Trigger: CTCAAGAGCAAGGTGCTGGCAGACGTGGCCATAATT...CTTCCTGCAGCCTCCTACGCAGGGTCCACGCCACGTGGCCTGGGCTGCCATCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGGTTCATGACAACCGGGTaGCTGCATCCTTCCAACCTC +
Preference number: 4 (lower is better)
Translates to: ARQSRRSPEMGSLGGSSRFMTTG*LHPSNL
Trigger: GAGGTTGGAAGGATGCAGCCACCCGGTTGTCATGAA...CCTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp CCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGGCGAACTGGGTGAGGTCTTaGCCACATTCAGCACACAGG +
Preference number: 4 (lower is better)
Translates to: PTVTAFPGNGFPRREQQANWVRS*PHSAHR
Trigger: CCTGTGTGCTGAATGTGGCCAAGACCTCACCCAGTT...CGCCTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GTCTCGTGGGACCCCCAAAGCCGTCCCCTAAGGAATGTGCTCTGGTACACAAGGGCACGCTGTGCACCATaGACACGGTCGCCGTGGACA +
Preference number: 4 (lower is better)
Translates to: VSWDPQSRPLRNVLWYTRARCAP*TRSPWT
Trigger: TGTCCACGGCGACCGTGTCCATGGTGCACAGCGTGC...CCTTGTGTACCAGAGCACATTCCTTAGGGGACGGCTTTGGGGGTCCCACGAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp CATGTCTCGTGGGACCCCCAAAGCCGTCCCCTAAGGAATGTGCTCTGGTACACAACCGAGACTGAGGGCTaGTCCGGGGACGTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: HVSWDPQSRPLRNVLWYTTETEG*SGDVRV
Trigger: CACTCGGACGTCCCCGGACCAGCCCTCAGTCTCGGT...TGTGTACCAGAGCACATTCCTTAGGGGACGGCTTTGGGGGTCCCACGAGACATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp CCGCGCTCACATGAGGTCGTTGAGCTCCGCCTCCAGCGCCTTGGCCATCTCGTCTTGGCACAGCACACCTaGGCCTTTAACACCTGTCAC +
Preference number: 4 (lower is better)
Translates to: PRSHEVVELRLQRLGHLVLAQHT*AFNTCH
Trigger: GTGACAGGTGTTAAAGGCCCAGGTGTGCTGTGCCAA...GACGAGATGGCCAAGGCGCTGGAGGCGGAGCTCAACGACCTCATGTGAGCGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
CDS-3UTR CCA 90 bp CACACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGTGGGACCCCCAAAGCCGTCCAGGCCACGTGGCGTaGACCCTGCGTAGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: HTVLLKLLVHVSWDPQSRPGHVA*TLRRRL
Trigger: CAGCCTCCTACGCAGGGTCCACGCCACGTGGCCTGG...ACGGCTTTGGGGGTCCCACGAGACATGGACTAGGAGTTTAAGCAGGACAGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp CAGGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCTTATTCGACATCTGCTaGCAGTGCTGCTCGGTTGTG +
Preference number: 4 (lower is better)
Translates to: QAARQSRRSPEMGSLGGSLFDIC*QCCSVV
Trigger: CACAACCGAGCAGCACTGTCAGCAGATGTCGAATAA...GCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp CCAGGAAAAGCAACGCCCCCTTGCCAGGATGCCAGTGGGAGGACGGCAGGATGGACTTTCTTTCTCGTCTaGGATTCTCGGGACCCAGGG +
Preference number: 4 (lower is better)
Translates to: PGKATPPCQDASGRTAGWTFFLV*DSRDPG
Trigger: CCCTGGGTCCCGAGAATCTCAGACGAGAAAGAAAGT...CCATCCTGCCGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp CGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCCCGCTGCCCGCGTCAGTGCCTCGAGAATaGTTTACTTTCTTTCTCGTC +
Preference number: 4 (lower is better)
Translates to: RPSAAGGRSGFSPCPLPASVPRE*FTFFLV
Trigger: GACGAGAAAGAAAGTAAATCATTCTCGAGGCACTGA...CGCGGGCAGCGGGCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp GGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTCCTGCCTCGATCTCCTTGTTaGGGTAGCGGTCATACTTGG +
Preference number: 4 (lower is better)
Translates to: GFQACLCWARSSCTHTVLPRSPC*GSGHTW
Trigger: CCAAGTATGACCGCTACCTCAACAAGGAGATCGAGG...CAGGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp CATGTCTCGTGGGACCCCCAAAGCCGTCCCCTAAGGAATGTGCTCTGGTACACATCAGCACCAGCCGAGTaGGGATCTTCGCTCCCAGCG +
Preference number: 4 (lower is better)
Translates to: HVSWDPQSRPLRNVLWYTSAPAE*GSSLPA
Trigger: CGCTGGGAGCGAAGATCCTCACTCGGCTGGTGCTGA...TGTGTACCAGAGCACATTCCTTAGGGGACGGCTTTGGGGGTCCCACGAGACATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp ACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGTGGGACCCCCAAAGCCGTCCCCCAGCCTGGGCCACGTaGGCCTCTGCTGAGCTCTTT +
Preference number: 4 (lower is better)
Translates to: TVLLKLLVHVSWDPQSRPPAWAT*ASAELF
Trigger: AAAGAGCTCAGCAGAGGCTCACGTGGCCCAGGCTGG...GGGACGGCTTTGGGGGTCCCACGAGACATGGACTAGGAGTTTAAGCAGGACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCCCGCTCTGAGACCTCAGTaGCTCGAGAATGATTTACTT +
Preference number: 4 (lower is better)
Translates to: GPGTSECCWRSVRLQSLPALRPQ*LENDLL
Trigger: AAGTAAATCATTCTCGAGGCACTGAGGTCTCAGAGC...GGGCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp AGTCCATGTCTCGTGGGACCCCCAAAGCCGTCCCCTAAGGAATGTGCTCTGGTACAAAGTCCAGGTCAGTaGCCGTGGCACCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: SPCLVGPPKPSPKECALVQSPGQ*PWHPGQ
Trigger: CTGCCCAGGGTGCCACGGGCACTGACCTGGACTTTG...TACCAGAGCACATTCCTTAGGGGACGGCTTTGGGGGTCCCACGAGACATGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp CATGTCTCGTGGGACCCCCAAAGCCGTCCCCTAAGGAATGTGCTCTGGTACACACAAAGTCCAGGTCAGTaGCCGTGGCACCCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: HVSWDPQSRPLRNVLWYTQSPGQ*PWHPGQ
Trigger: CTGCCCAGGGTGCCACGGGCACTGACCTGGACTTTG...TGTGTACCAGAGCACATTCCTTAGGGGACGGCTTTGGGGGTCCCACGAGACATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp CACACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGTGGGACCCCCAAAGCCGTGCTCCGGCACGATCTTaGGGATGTCCGGCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: HTVLLKLLVHVSWDPQSRAPARS*GCPAPP
Trigger: AGGAGGCGCCGGACATCCGCAAGATCGTGCCGGAGC...ACGGCTTTGGGGGTCCCACGAGACATGGACTAGGAGTTTAAGCAGGACAGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp ACGCACACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGTGGGACCCCCAAAGCGCTCCGGCACGATCTTaGGGATGTCCGGCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: THTVLLKLLVHVSWDPQSAPARS*GCPAPP
Trigger: AGGAGGCGCCGGACATCCGCAAGATCGTGCCGGAGC...GCTTTGGGGGTCCCACGAGACATGGACTAGGAGTTTAAGCAGGACAGTGTGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp ACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGTGGGACCCCCAAAGCCGTCCCGCAGCACCTTCTCTGTaGCAGCTCGCGCGGCGATCA +
Preference number: 4 (lower is better)
Translates to: TVLLKLLVHVSWDPQSRPAAPSL*QLARRS
Trigger: TGATCGCCGCGCGAGCTGGCACAGAGAAGGTGCTGC...GGGACGGCTTTGGGGGTCCCACGAGACATGGACTAGGAGTTTAAGCAGGACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp CATGTCTCGTGGGACCCCCAAAGCCGTCCCCTAAGGAATGTGCTCTGGTACACAGCAGCACCTTCTCTGTaGCAGCTCGCGCGGCGATCA +
Preference number: 4 (lower is better)
Translates to: HVSWDPQSRPLRNVLWYTAAPSL*QLARRS
Trigger: TGATCGCCGCGCGAGCTGGCACAGAGAAGGTGCTGC...TGTGTACCAGAGCACATTCCTTAGGGGACGGCTTTGGGGGTCCCACGAGACATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp ACGCACACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGTGGGACCCCCAAAGCCGGCCTCGGAGCTGCTaGCCTCATCCTCGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: THTVLLKLLVHVSWDPQSRPRSC*PHPRCW
Trigger: CCAGCAACGAGGATGAGGGCAGCAGCTCCGAGGCCG...GCTTTGGGGGTCCCACGAGACATGGACTAGGAGTTTAAGCAGGACAGTGTGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp AGCTCGTGCACGCACACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGTGGGACTCAGTCCCTGCCCGCTaGCCGCGCTCACATGAGGTC +
Preference number: 4 (lower is better)
Translates to: SSCTHTVLLKLLVHVSWDSVPAR*PRSHEV
Trigger: GACCTCATGTGAGCGCGGGCAGCGGGCAGGGACTGA...GTCCCACGAGACATGGACTAGGAGTTTAAGCAGGACAGTGTGCGTGCACGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp ACGCACACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGTGGGACCCCCAAAGCTCAGGCTTCAGTCCCTaGCCGCTGCCCGCGCTCACA +
Preference number: 4 (lower is better)
Translates to: THTVLLKLLVHVSWDPQSSGFSP*PLPALT
Trigger: TGTGAGCGCGGGCAGCGGGCAGGGACTGAAGCCTGA...GCTTTGGGGGTCCCACGAGACATGGACTAGGAGTTTAAGCAGGACAGTGTGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp CATGTCTCGTGGGACCCCCAAAGCCGTCCCCTAAGGAATGTGCTCTGGTACACAGGGACGTCCGAGTGCTaGTGGAGGTCGGTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: HVSWDPQSRPLRNVLWYTGTSEC*WRSVRL
Trigger: AAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCC...TGTGTACCAGAGCACATTCCTTAGGGGACGGCTTTGGGGGTCCCACGAGACATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp AGTCCATGTCTCGTGGGACCCCCAAAGCCGTCCCCTAAGGAATGTGCTCTGGTACAGGAAGCTCCAGGCTaGCCGACAGTCACGGCGTTC +
Preference number: 4 (lower is better)
Translates to: SPCLVGPPKPSPKECALVQEAPG*PTVTAF
Trigger: GAACGCCGTGACTGTCGGGCAGCCTGGAGCTTCCTG...TACCAGAGCACATTCCTTAGGGGACGGCTTTGGGGGTCCCACGAGACATGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GTCTCGTGGGACCCCCAAAGCCGTCCCCTAAGGAATGTGCTCTGGTACACAAGGGAAGTCCTTGCAGTGTaGACGCAGGCGCGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: VSWDPQSRPLRNVLWYTREVLAV*TQARVQ
Trigger: CTGCACACGCGCCTGCGTCCACACTGCAAGGACTTC...CCTTGTGTACCAGAGCACATTCCTTAGGGGACGGCTTTGGGGGTCCCACGAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp ACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGTGGGACCCCCAAAGCCGTCCCTCTCCAGGCCATTGCTaGGCTCCACTCCAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: TVLLKLLVHVSWDPQSRPSPGHC*APLQGP
Trigger: AGGCCCCTGGAGTGGAGCCCAGCAATGGCCTGGAGA...GGGACGGCTTTGGGGGTCCCACGAGACATGGACTAGGAGTTTAAGCAGGACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp ACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGGCGGCGTGCTCTCGCTGTCGCTaGATAAGTCAAAGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: TVTAFPGNGFPRREQQAACSRCR*ISQSPG
Trigger: ACCTGGACTTTGACTTATCCAGCGACAGCGAGAGCA...CGCCGCCTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCCCGGTAGCGGTCATACTTaGCATAGTAGTCAGTGTGTA +
Preference number: 4 (lower is better)
Translates to: GPGTSECCWRSVRLQSLPGSGHT*HSSQCV
Trigger: TACACACTGACTACTATGCCAAGTATGACCGCTACC...GGGCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GTCTCGTGGGACCCCCAAAGCCGTCCCCTAAGGAATGTGCTCTGGTACACAAGGCCCTGCTGGACTCGCTaGCGGCGTCCTCTTCATTCA +
Preference number: 4 (lower is better)
Translates to: VSWDPQSRPLRNVLWYTRPCWTR*RRPLHS
Trigger: TGAATGAAGAGGACGCCGCCAGCGAGTCCAGCAGGG...CCTTGTGTACCAGAGCACATTCCTTAGGGGACGGCTTTGGGGGTCCCACGAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp AGCTCGTGCACGCACACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGTGGGACTGCTGGACTCCCTGCTaGACTCGCTGGCGGCGTCCT +
Preference number: 4 (lower is better)
Translates to: SSCTHTVLLKLLVHVSWDCWTPC*TRWRRP
Trigger: AGGACGCCGCCAGCGAGTCCAGCAGGGAGTCCAGCA...GTCCCACGAGACATGGACTAGGAGTTTAAGCAGGACAGTGTGCGTGCACGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp AGCTCGTGCACGCACACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGTGGGACACCGAGACTGAGGGCTaGTCCGGGGACGTCCGAGTG +
Preference number: 4 (lower is better)
Translates to: SSCTHTVLLKLLVHVSWDTETEG*SGDVRV
Trigger: CACTCGGACGTCCCCGGACCAGCCCTCAGTCTCGGT...GTCCCACGAGACATGGACTAGGAGTTTAAGCAGGACAGTGTGCGTGCACGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCCCGCTGCCTAAGGAATGTGCTCTaGTACACAAGGGGAAAACAC +
Preference number: 4 (lower is better)
Translates to: GDVRVLLEVGQASVPARCLRNVL*YTRGKH
Trigger: GTGTTTTCCCCTTGTGTACCAGAGCACATTCCTTAG...GCAGCGGGCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGTaGGACCCCCAAAGCCGTCCC +
Preference number: 4 (lower is better)
Translates to: ACLCWARSSCTHTVLLKLLVHVS*DPQSRP
Trigger: GGGACGGCTTTGGGGGTCCCACGAGACATGGACTAG...GAGTTTAAGCAGGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp GCTCGGAGCTCGTGCACGCACACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGCAGCTCGCTGTTCTGTaGCTCGGTCTCCGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: ARSSCTHTVLLKLLVHVSQLAVL*LGLRLL
Trigger: AAGGAGGCGGAGACCGAGTCACAGAACAGCGAGCTG...CGAGACATGGACTAGGAGTTTAAGCAGGACAGTGTGCGTGCACGAGCTCCGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp GTCCTGCTTAAACTCCTAGTCCATGTCTCGTGGGACCCCCAAAGCCGTCCCCTACCAGCACCTTGCTCTTaGGCTCCGGCACGATCTTGC +
Preference number: 4 (lower is better)
Translates to: VLLKLLVHVSWDPQSRPLPAPCS*APARSC
Trigger: GCAAGATCGTGCCGGAGCTCAAGAGCAAGGTGCTGG...TAGGGGACGGCTTTGGGGGTCCCACGAGACATGGACTAGGAGTTTAAGCAGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp ACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGTGGGACCCCCAAAGCCGTCCCCCAGCACCTTGCTCTTaGGCTCCGGCACGATCTTGC +
Preference number: 4 (lower is better)
Translates to: TVLLKLLVHVSWDPQSRPPAPCS*APARSC
Trigger: GCAAGATCGTGCCGGAGCTCAAGAGCAAGGTGCTGG...GGGACGGCTTTGGGGGTCCCACGAGACATGGACTAGGAGTTTAAGCAGGACAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp ACGCACACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGTGGGACCCCCAAAGCTCAGCACCAGCCGAGTaGGGATCTTCGCTCCCAGCG +
Preference number: 4 (lower is better)
Translates to: THTVLLKLLVHVSWDPQSSAPAE*GSSLPA
Trigger: CGCTGGGAGCGAAGATCCTCACTCGGCTGGTGCTGA...GCTTTGGGGGTCCCACGAGACATGGACTAGGAGTTTAAGCAGGACAGTGTGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp AGTCCATGTCTCGTGGGACCCCCAAAGCCGTCCCCTAAGGAATGTGCTCTGGTATGGTGTGATCGTCCCTaGGCGGGAAGAGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SPCLVGPPKPSPKECALVWCDRP*AGRAAP
Trigger: AGGAGCAGCTCTTCCCGCTCAGGGACGATCACACCA...TACCAGAGCACATTCCTTAGGGGACGGCTTTGGGGGTCCCACGAGACATGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp CATGTCTCGTGGGACCCCCAAAGCCGTCCCCTAAGGAATGTGCTCTGGTACACACTCTGTGCCTTGGTGTaGTCGTCCCTGAGCGGGAAG +
Preference number: 4 (lower is better)
Translates to: HVSWDPQSRPLRNVLWYTLCALV*SSLSGK
Trigger: CTTCCCGCTCAGGGACGATCACACCAAGGCACAGAG...TGTGTACCAGAGCACATTCCTTAGGGGACGGCTTTGGGGGTCCCACGAGACATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp GCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTCCTGCTTAAACTCCACGTGAGCCTCTGCTaGGCTCTTTGGCACAGCACA +
Preference number: 4 (lower is better)
Translates to: ACLCWARSSCTHTVLLKLHVSLC*ALWHST
Trigger: TGTGCTGTGCCAAAGAGCTCAGCAGAGGCTCACGTG...GAGTTTAAGCAGGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp ACGCACACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGTGGGACCCCCAAAGCGCCTGCGATGGTGTGTaGGTACAGCCGGCTGCCGAA +
Preference number: 4 (lower is better)
Translates to: THTVLLKLLVHVSWDPQSACDGV*VQPAAE
Trigger: TTCGGCAGCCGGCTGTACGCACACACCATCGCAGGC...GCTTTGGGGGTCCCACGAGACATGGACTAGGAGTTTAAGCAGGACAGTGTGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp CGGCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGCTCTGAGACCTCAGTaGCTCGAGAATGATTTACTT +
Preference number: 4 (lower is better)
Translates to: RRGFQACLCWARSSCTHTALRPQ*LENDLL
Trigger: AAGTAAATCATTCTCGAGGCACTGAGGTCTCAGAGC...AGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp ACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGTGGGACCCCCAAAGCCGTCCCGCCGTTCAGCTCCCGTaGAGGCTTCTCCAGGCCATT +
Preference number: 4 (lower is better)
Translates to: TVLLKLLVHVSWDPQSRPAVQLP*RLLQAI
Trigger: AATGGCCTGGAGAAGCCTGCACGGGAGCTGAACGGC...GGGACGGCTTTGGGGGTCCCACGAGACATGGACTAGGAGTTTAAGCAGGACAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp GTCTCGTGGGACCCCCAAAGCCGTCCCCTAAGGAATGTGCTCTGGTACACAAGGCCTCGGACTCACTGCTaGTCTCGCTGTCGCTGGATA +
Preference number: 4 (lower is better)
Translates to: VSWDPQSRPLRNVLWYTRPRTHC*SRCRWI
Trigger: TATCCAGCGACAGCGAGAGCAGCAGTGAGTCCGAGG...CCTTGTGTACCAGAGCACATTCCTTAGGGGACGGCTTTGGGGGTCCCACGAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp CAGGAAGCTCCAGGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAATTATGGCCACGTCTaGCAGCACCTTGCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: QEAPGCPTVTAFPGNGFPNYGHV*QHLALE
Trigger: CTCAAGAGCAAGGTGCTGGCAGACGTGGCCATAATT...AGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTGGAGCTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp CAGGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCTTCTTACTCTGCAACTaGGTGAGGTCTTGGCCACAT +
Preference number: 4 (lower is better)
Translates to: QAARQSRRSPEMGSLGGSFLLCN*VRSWPH
Trigger: ATGTGGCCAAGACCTCACCCAGTTGCAGAGTAAGAA...GCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GGCTGGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGGTAGCGGTCATACTTaGCATAGTAGTCAGTGTGTA +
Preference number: 4 (lower is better)
Translates to: GWSGDVRVLLEVGQASVPGSGHT*HSSQCV
Trigger: TACACACTGACTACTATGCCAAGTATGACCGCTACC...AGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp AGTCCATGTCTCGTGGGACCCCCAAAGCCGTCCCCTAAGGAATGTGCTCTGGTAACGTCCGAGTGCTGCTaGAGGTCGGTCAGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: SPCLVGPPKPSPKECALVTSECC*RSVRLQ
Trigger: CTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGT...TACCAGAGCACATTCCTTAGGGGACGGCTTTGGGGGTCCCACGAGACATGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp CACGTGGCGTGGACCCTGCGTAGGAGGCTGCAGGAAGCTCCAGGCTGCCCGACACTAAGGAATGTGCTCTaGTACACAAGGGGAAAACAC +
Preference number: 4 (lower is better)
Translates to: HVAWTLRRRLQEAPGCPTLRNVL*YTRGKH
Trigger: GTGTTTTCCCCTTGTGTACCAGAGCACATTCCTTAG...TGTCGGGCAGCCTGGAGCTTCCTGCAGCCTCCTACGCAGGGTCCACGCCACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp ACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGTGGGACCCCCAAAGCCGTCCCCTAGTCCATGTCTCGTaGGACCCCCAAAGCCGTCCC +
Preference number: 4 (lower is better)
Translates to: TVLLKLLVHVSWDPQSRPLVHVS*DPQSRP
Trigger: GGGACGGCTTTGGGGGTCCCACGAGACATGGACTAG...GGGACGGCTTTGGGGGTCCCACGAGACATGGACTAGGAGTTTAAGCAGGACAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp ACGCACACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGTGGGACCCCCAAAGCTGGTGTGATCGTCCCTaGGCGGGAAGAGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: THTVLLKLLVHVSWDPQSWCDRP*AGRAAP
Trigger: AGGAGCAGCTCTTCCCGCTCAGGGACGATCACACCA...GCTTTGGGGGTCCCACGAGACATGGACTAGGAGTTTAAGCAGGACAGTGTGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp CATGTCTCGTGGGACCCCCAAAGCCGTCCCCTAAGGAATGTGCTCTGGTACACAGTGGACAGCGGCACCTaGTGCTTCCCGTTCTTACTC +
Preference number: 4 (lower is better)
Translates to: HVSWDPQSRPLRNVLWYTVDSGT*CFPFLL
Trigger: GAGTAAGAACGGGAAGCAGCAGGTGCCGCTGTCCAC...TGTGTACCAGAGCACATTCCTTAGGGGACGGCTTTGGGGGTCCCACGAGACATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp ACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGTGGGACCCCCAAAGCCGTCCCCCGAAGGTGAAGACGTaGAGCTCGTACAGCTTGGCG +
Preference number: 4 (lower is better)
Translates to: TVLLKLLVHVSWDPQSRPPKVKT*SSYSLA
Trigger: CGCCAAGCTGTACGAGCTGCACGTCTTCACCTTCGG...GGGACGGCTTTGGGGGTCCCACGAGACATGGACTAGGAGTTTAAGCAGGACAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp TGGGAGGACGGCAGGATGGCAGCCCAGGCCACGTGGCGTGGACCCTGCGTAGGACATTCATATCACCCGTaGCCTGGAAGTATACATATT +
Preference number: 4 (lower is better)
Translates to: WEDGRMAAQATWRGPCVGHSYHP*PGSIHI
Trigger: AATATGTATACTTCCAGGGCACGGGTGATATGAATG...TCCTACGCAGGGTCCACGCCACGTGGCCTGGGCTGCCATCCTGCCGTCCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp CATGTCTCGTGGGACCCCCAAAGCCGTCCCCTAAGGAATGTGCTCTGGTACACATGCCCTCATCCTCGTTaGTGGACTCCCTGCTGGACT +
Preference number: 4 (lower is better)
Translates to: HVSWDPQSRPLRNVLWYTCPHPR*WTPCWT
Trigger: AGTCCAGCAGGGAGTCCAGCAACGAGGATGAGGGCA...TGTGTACCAGAGCACATTCCTTAGGGGACGGCTTTGGGGGTCCCACGAGACATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp CAGGCTTCAGTCCCTGCCCGCTGCCCGCGCTCACATGAGGTCGTTGAGCTCCGCTCACAGTTATCAGATTaGGGGCAAACTTCCAGACAT +
Preference number: 4 (lower is better)
Translates to: QASVPARCPRSHEVVELRSQLSD*GQTSRH
Trigger: ATGTCTGGAAGTTTGCCCCCAATCTGATAACTGTGA...GCGGAGCTCAACGACCTCATGTGAGCGCGGGCAGCGGGCAGGGACTGAAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
CDS-3UTR CCA 90 bp ACGCACACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGTGGGACCCCCAAAGCAAGGAAGAGGGCTCCTaGCGGATGGGTAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: THTVLLKLLVHVSWDPQSKEEGS*RMGREL
Trigger: CAGCTCCCTACCCATCCGCCAGGAGCCCTCTTCCTT...GCTTTGGGGGTCCCACGAGACATGGACTAGGAGTTTAAGCAGGACAGTGTGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp GCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTCCTGCTTAAACTCTACTCTGCAACTGGGTaGGGTCTTGGCCACATTCAG +
Preference number: 4 (lower is better)
Translates to: ACLCWARSSCTHTVLLKLYSATG*GLGHIQ
Trigger: CTGAATGTGGCCAAGACCTCACCCAGTTGCAGAGTA...GAGTTTAAGCAGGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp GCTCCAGGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGTCAGTGCCTCGAGAATaGTTTACTTTCTTTCTCGTC +
Preference number: 4 (lower is better)
Translates to: APGCPTVTAFPGNGFPRRSVPRE*FTFFLV
Trigger: GACGAGAAAGAAAGTAAATCATTCTCGAGGCACTGA...CCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp ACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGTGGGACCCCCAAAGCCGTCCCAGCTTCCGGTTTCGGTaGAGTCGCTGCTGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: TVLLKLLVHVSWDPQSRPSFRFR*SRCWSS
Trigger: AGAAGACCAGCAGCGACTGCACCGAAACCGGAAGCT...GGGACGGCTTTGGGGGTCCCACGAGACATGGACTAGGAGTTTAAGCAGGACAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp TGGAGGTCGGTCAGGCTTCAGTCCCTGCCCGCTGCCCGCGCTCACATGAGGTCGCATTCATATCACCCGTaGCCTGGAAGTATACATATT +
Preference number: 4 (lower is better)
Translates to: WRSVRLQSLPAARAHMRSHSYHP*PGSIHI
Trigger: AATATGTATACTTCCAGGGCACGGGTGATATGAATG...CGACCTCATGTGAGCGCGGGCAGCGGGCAGGGACTGAAGCCTGACCGACCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
CDS-3UTR GCA 90 bp CTTCAGTCCCTGCCCGCTGCCCGCGCTCACATGAGGTCGTTGAGCTCCGCCTCCCATTCATATCACCCGTaGCCTGGAAGTATACATATT +
Preference number: 4 (lower is better)
Translates to: LQSLPAARAHMRSLSSASHSYHP*PGSIHI
Trigger: AATATGTATACTTCCAGGGCACGGGTGATATGAATG...GGAGGCGGAGCTCAACGACCTCATGTGAGCGCGGGCAGCGGGCAGGGACTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
CDS-3UTR GCA 90 bp CCAGGAAAAGCAACGCCCCCTTGCCAGGATGCCAGTGGGAGGACGGCAGGATGGGCTCTGAGACCTCAGTaGCTCGAGAATGATTTACTT +
Preference number: 4 (lower is better)
Translates to: PGKATPPCQDASGRTAGWALRPQ*LENDLL
Trigger: AAGTAAATCATTCTCGAGGCACTGAGGTCTCAGAGC...CCATCCTGCCGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp CAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTCCTGCTTAAAAACTGGGTGAGGTCTTaGCCACATTCAGCACACAGG +
Preference number: 4 (lower is better)
Translates to: QACLCWARSSCTHTVLLKNWVRS*PHSAHR
Trigger: CCTGTGTGCTGAATGTGGCCAAGACCTCACCCAGTT...TTTAAGCAGGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp ACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGTGGGACCCCCAAAGCCGTCCCCTAAAAAGCCTGCGATaGTGTGTGCGTACAGCCGGC +
Preference number: 4 (lower is better)
Translates to: TVLLKLLVHVSWDPQSRPLKSLR*CVRTAG
Trigger: GCCGGCTGTACGCACACACCATCGCAGGCTTTTTAG...GGGACGGCTTTGGGGGTCCCACGAGACATGGACTAGGAGTTTAAGCAGGACAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GGCGGCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACATCCCGTTTTAGAAAATaGGTCAATACATTCATCCCT +
Preference number: 4 (lower is better)
Translates to: GGGGSRHVCAGLGARARTSRFRK*VNTFIP
Trigger: AGGGATGAATGTATTGACCCATTTTCTAAAACGGGA...TGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp GTCTCGTGGGACCCCCAAAGCCGTCCCCTAAGGAATGTGCTCTGGTACACAAGGTTATTCGACATCTGCTaGCAGTGCTGCTCGGTTGTG +
Preference number: 4 (lower is better)
Translates to: VSWDPQSRPLRNVLWYTRLFDIC*QCCSVV
Trigger: CACAACCGAGCAGCACTGTCAGCAGATGTCGAATAA...CCTTGTGTACCAGAGCACATTCCTTAGGGGACGGCTTTGGGGGTCCCACGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp AGTCCATGTCTCGTGGGACCCCCAAAGCCGTCCCCTAAGGAATGTGCTCTGGTATCGGGTGTAGCCCACTaGAAATTATGGCCACGTCTG +
Preference number: 4 (lower is better)
Translates to: SPCLVGPPKPSPKECALVSGVAH*KLWPRL
Trigger: CAGACGTGGCCATAATTTTCAGTGGGCTACACCCGA...TACCAGAGCACATTCCTTAGGGGACGGCTTTGGGGGTCCCACGAGACATGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp ACGCACACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGTGGGACCCCCAAAGCAGCTTCCGGTTTCGGTaGAGTCGCTGCTGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: THTVLLKLLVHVSWDPQSSFRFR*SRCWSS
Trigger: AGAAGACCAGCAGCGACTGCACCGAAACCGGAAGCT...GCTTTGGGGGTCCCACGAGACATGGACTAGGAGTTTAAGCAGGACAGTGTGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR GCA 90 bp AGCTCGTGCACGCACACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGTGGGACGCTGTTCTCCCTCTGTaGCTTGGTGTGATCGTCCCT +
Preference number: 4 (lower is better)
Translates to: SSCTHTVLLKLLVHVSWDAVLPL*LGVIVP
Trigger: AGGGACGATCACACCAAGGCACAGAGGGAGAACAGC...GTCCCACGAGACATGGACTAGGAGTTTAAGCAGGACAGTGTGCGTGCACGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GCCGCCCAGGAAAAGCAACGCCCCCTTGCCAGGATGCCAGTGGGAGGACGGCAGTCCCGTTTTAGAAAATaGGTCAATACATTCATCCCT +
Preference number: 4 (lower is better)
Translates to: AAQEKQRPLARMPVGGRQSRFRK*VNTFIP
Trigger: AGGGATGAATGTATTGACCCATTTTCTAAAACGGGA...CTGCCGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGGGCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp AAAGGCCGCCCAGGAAAAGCAACGCCCCCTTGCCAGGATGCCAGTGGGAGGACGTCACAGTTATCAGATTaGGGGCAAACTTCCAGACAT +
Preference number: 4 (lower is better)
Translates to: KGRPGKATPPCQDASGRTSQLSD*GQTSRH
Trigger: ATGTCTGGAAGTTTGCCCCCAATCTGATAACTGTGA...CGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGGGCGGCCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp CAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTCCTGCTTAAATGCTCTCGCTGTCGCTaGATAAGTCAAAGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: QACLCWARSSCTHTVLLKCSRCR*ISQSPG
Trigger: ACCTGGACTTTGACTTATCCAGCGACAGCGAGAGCA...TTTAAGCAGGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GCCCAGGCCACGTGGCGTGGACCCTGCGTAGGAGGCTGCAGGAAGCTCCAGGCTATGTGTTTCTGTATGTaGAGCTCTGCAAATATACAT +
Preference number: 4 (lower is better)
Translates to: AQATWRGPCVGGCRKLQAMCFCM*SSANIH
Trigger: ATGTATATTTGCAGAGCTCCACATACAGAAACACAT...AGCCTGGAGCTTCCTGCAGCCTCCTACGCAGGGTCCACGCCACGTGGCCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp ACACCAACCCGCCCCTTACCGAGACAGCGGGCGCACCAGCCTGGGCCACGTGAGGAGAAATCTGTTTGGTaGGTCAGATATGAAATAGAT +
Preference number: 4 (lower is better)
Translates to: TPTRPLPRQRAHQPGPREEKSVW*VRYEID
Trigger: ATCTATTTCATATCTGACCCACCAAACAGATTTCTC...CTCACGTGGCCCAGGCTGGTGCGCCCGCTGTCTCGGTAAGGGGCGGGTTGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp GTCCTGCTTAAACTCCTAGTCCATGTCTCGTGGGACCCCCAAAGCCGTCCCCTATTATTCGACATCTGCTaGCAGTGCTGCTCGGTTGTG +
Preference number: 4 (lower is better)
Translates to: VLLKLLVHVSWDPQSRPLLFDIC*QCCSVV
Trigger: CACAACCGAGCAGCACTGTCAGCAGATGTCGAATAA...TAGGGGACGGCTTTGGGGGTCCCACGAGACATGGACTAGGAGTTTAAGCAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR TCA 90 bp ACGCACACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGTGGGACCCCCAAAGCTCGGGTGTAGCCCACTaGAAATTATGGCCACGTCTG +
Preference number: 4 (lower is better)
Translates to: THTVLLKLLVHVSWDPQSSGVAH*KLWPRL
Trigger: CAGACGTGGCCATAATTTTCAGTGGGCTACACCCGA...GCTTTGGGGGTCCCACGAGACATGGACTAGGAGTTTAAGCAGGACAGTGTGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GTCTCGTGGGACCCCCAAAGCCGTCCCCTAAGGAATGTGCTCTGGTACACAAGGTTCTTACTCTGCAACTaGGTGAGGTCTTGGCCACAT +
Preference number: 4 (lower is better)
Translates to: VSWDPQSRPLRNVLWYTRFLLCN*VRSWPH
Trigger: ATGTGGCCAAGACCTCACCCAGTTGCAGAGTAAGAA...CCTTGTGTACCAGAGCACATTCCTTAGGGGACGGCTTTGGGGGTCCCACGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTCCATGTGTTTCTGTATGTaGAGCTCTGCAAATATACAT +
Preference number: 4 (lower is better)
Translates to: GGSRHVCAGLGARARTLSMCFCM*SSANIH
Trigger: ATGTATATTTGCAGAGCTCCACATACAGAAACACAT...GGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GTCTCGTGGGACCCCCAAAGCCGTCCCCTAAGGAATGTGCTCTGGTACACAAGGCTAAGGAATGTGCTCTaGTACACAAGGGGAAAACAC +
Preference number: 4 (lower is better)
Translates to: VSWDPQSRPLRNVLWYTRLRNVL*YTRGKH
Trigger: GTGTTTTCCCCTTGTGTACCAGAGCACATTCCTTAG...CCTTGTGTACCAGAGCACATTCCTTAGGGGACGGCTTTGGGGGTCCCACGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGGGAGAAATCTGTTTGGTaGGTCAGATATGAAATAGAT +
Preference number: 4 (lower is better)
Translates to: ARQSRRSPEMGSLGGSSREKSVW*VRYEID
Trigger: ATCTATTTCATATCTGACCCACCAAACAGATTTCTC...CCTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTCCTGCTTAAACTCTTCAGCTTCCTCTTGTaGCCTCTCTTTGTCCATACT +
Preference number: 4 (lower is better)
Translates to: ACLCWARSSCTHTVLLKLFSFLL*PLFVHT
Trigger: AGTATGGACAAAGAGAGGCCACAAGAGGAAGCTGAA...GAGTTTAAGCAGGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591598.5
CDS-3UTR TCA 90 bp CAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTCCTGCTTAAATCAGTGCCTCGAGAATaGTTTACTTTCTTTCTCGTC +
Preference number: 4 (lower is better)
Translates to: QACLCWARSSCTHTVLLKSVPRE*FTFFLV
Trigger: GACGAGAAAGAAAGTAAATCATTCTCGAGGCACTGA...TTTAAGCAGGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp GTCCTGCTTAAACTCCTAGTCCATGTCTCGTGGGACCCCCAAAGCCGTCCCCTAGGTAGCGGTCATACTTaGCATAGTAGTCAGTGTGTA +
Preference number: 4 (lower is better)
Translates to: VLLKLLVHVSWDPQSRPLGSGHT*HSSQCV
Trigger: TACACACTGACTACTATGCCAAGTATGACCGCTACC...TAGGGGACGGCTTTGGGGGTCCCACGAGACATGGACTAGGAGTTTAAGCAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp CAGGAAGCTCCAGGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTATGTGTTTCTGTATGTaGAGCTCTGCAAATATACAT +
Preference number: 4 (lower is better)
Translates to: QEAPGCPTVTAFPGNGFPMCFCM*SSANIH
Trigger: ATGTATATTTGCAGAGCTCCACATACAGAAACACAT...AGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTGGAGCTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp CAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTCCTGCTTAAATCCCGTTTTAGAAAATaGGTCAATACATTCATCCCT +
Preference number: 4 (lower is better)
Translates to: QACLCWARSSCTHTVLLKSRFRK*VNTFIP
Trigger: AGGGATGAATGTATTGACCCATTTTCTAAAACGGGA...TTTAAGCAGGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CCA 90 bp CAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTCCTGCTTAAAGAGAAATCTGTTTGGTaGGTCAGATATGAAATAGAT +
Preference number: 4 (lower is better)
Translates to: QACLCWARSSCTHTVLLKEKSVW*VRYEID
Trigger: ATCTATTTCATATCTGACCCACCAAACAGATTTCTC...TTTAAGCAGGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS GCA 90 bp GCGCGCACAGCTCCCGCACCACGCCCGCGCGCTCCGACCTCAGCCTaGGTTCCGGCCGCGCGGGGCGCACGCAGCCCCCGGAGGCTACAC +
Preference number: 5 (lower is better)
Translates to: ARTAPAPRPRAPTSA*VPAARGARSPRRLH
Trigger: GTGTAGCCTCCGGGGGCTGCGTGCGCCCCGCGCGGCCGGAACGCAGGCTGAGGTCGGAGCGCGCGGGCGTGGTGCGGGAGCTGTGCGCGC
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000613122.5
ENST00000632301.1
ENST00000632932.1
CDS GCA 90 bp CATCGCGGACAGAGGGCGGGCGGGCGGTCGGTACGGGGCCTGCGCTaGGCTCAGAGCGCAGCGCCTACCGCGGCGACACAACCCAGGCGG +
Preference number: 5 (lower is better)
Translates to: HRGQRAGGRSVRGLR*AQSAAPTAATQPRR
Trigger: CCGCCTGGGTTGTGTCGCCGCGGTAGGCGCTGCGCTCTGAGCGCAGCGCAGGCCCCGTACCGACCGCCCGCCCGCCCTCTGTCCGCGATG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000613122.5
ENST00000632301.1
ENST00000632932.1
CDS CCA 90 bp GGCCGCTGTCCCGGTGCCACCCGGCCACCCTGCGCACAGGATCCCTaGGGCTCAGGAGCGCCTGCCAGCTCTTGGCTGCTGGTGGGGGCC +
Preference number: 5 (lower is better)
Translates to: GRCPGATRPPCAQDP*GSGAPASSWLLVGA
Trigger: GGCCCCCACCAGCAGCCAAGAGCTGGCAGGCGCTCCTGAGCCCCAGGGATCCTGTGCGCAGGGTGGCCGGGTGGCACCGGGACAGCGGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS GCA 90 bp ACCTCCATCGCGGACAGAGGGCGGGCGGGCGGTCGGTACGGGGCCTaGGCTGCGCTCAGAGCGCAGCGCCTACCGCGGCGACACAACCCA +
Preference number: 5 (lower is better)
Translates to: TSIADRGRAGGRYGA*AALRAQRLPRRHNP
Trigger: TGGGTTGTGTCGCCGCGGTAGGCGCTGCGCTCTGAGCGCAGCGCAGGCCCCGTACCGACCGCCCGCCCGCCCTCTGTCCGCGATGGAGGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000613122.5
ENST00000632301.1
ENST00000632932.1
CDS GCA 90 bp TCCAACCTCACCAGAACCGCTCCTGGGGCGACCACCTGGCCCGGCTaGGCGCACAGCTCCCGCACCACGCCCGCGCGCTCCGACCTCAGC +
Preference number: 5 (lower is better)
Translates to: SNLTRTAPGATTWPG*AHSSRTTPARSDLS
Trigger: GCTGAGGTCGGAGCGCGCGGGCGTGGTGCGGGAGCTGTGCGCGCAGCCGGGCCAGGTGGTCGCCCCAGGAGCGGTTCTGGTGAGGTTGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS GCA 90 bp GTGGCACCCTGGGCAGGCCGCTGTCCCGGTGCCACCCGGCCACCCTaGGCACAGGATCCCTGGGGCTCAGGAGCGCCTGCCAGCTCTTGG +
Preference number: 5 (lower is better)
Translates to: VAPWAGRCPGATRPP*AQDPWGSGAPASSW
Trigger: CCAAGAGCTGGCAGGCGCTCCTGAGCCCCAGGGATCCTGTGCGCAGGGTGGCCGGGTGGCACCGGGACAGCGGCCTGCCCAGGGTGCCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS TCA 90 bp GGTGCGTGGCCCTGTCAGGGGCGTCGGGGCTCAGCACCAGCCGAGTaGGGATCTTCGCTCCCAGCGCCGTGGCGTGGTAATGCTCCCGCG +
Preference number: 5 (lower is better)
Translates to: GAWPCQGRRGSAPAE*GSSLPAPWRGNAPA
Trigger: CGCGGGAGCATTACCACGCCACGGCGCTGGGAGCGAAGATCCTCACTCGGCTGGTGCTGAGCCCCGACGCCCCTGACAGGGCCACGCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000075430.11
ENST00000299543.9
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS GCA 90 bp CTCAGCCTCCCCGAACCTCAGCAGGCGGGAGGTGGGTACCGTCAGTaGCTCGATGTGGCGGCGGGAGAGGCTGAGCCCAGTGCCGGGAGG +
Preference number: 5 (lower is better)
Translates to: LSLPEPQQAGGGYRQ*LDVAAGEAEPSAGR
Trigger: CCTCCCGGCACTGGGCTCAGCCTCTCCCGCCGCCACATCGAGGCACTGACGGTACCCACCTCCCGCCTGCTGAGGTTCGGGGAGGCTGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS-3UTR CAA 90 bp GAGCAGCAGGCGGCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGAGCGCCTGCCAGCTCTaGGCTGCTGGTGGGGGCCTG +
Preference number: 5 (lower is better)
Translates to: EQQAAGVPGMSVLGSELVSACQL*AAGGGL
Trigger: CAGGCCCCCACCAGCAGCCAAGAGCTGGCAGGCGCT...CACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCGCCTGCTGCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS GCA 90 bp GAGCACGGCCCCGCTCACAGCTCTCCGACGTTGAGGGCGTCTGTGTaGGACGGCACAGCCCCGTGGTCCCTGAGACAGGCAGGTGAGGCG +
Preference number: 5 (lower is better)
Translates to: EHGPAHSSPTLRASV*DGTAPWSLRQAGEA
Trigger: CGCCTCACCTGCCTGTCTCAGGGACCACGGGGCTGTGCCGTCGCACACAGACGCCCTCAACGTCGGAGAGCTGTGAGCGGGGCCGTGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS-3UTR CAA 90 bp CTGGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCAGCGCCTGCCAGCTCTaGGCTGCTGGTGGGGGCCTG +
Preference number: 5 (lower is better)
Translates to: LVRGRPSAAGGRSGFSPCSACQL*AAGGGL
Trigger: CAGGCCCCCACCAGCAGCCAAGAGCTGGCAGGCGCT...GCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CAA 90 bp CGGCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTCCCAGCTCAGGCTCCTaGTCCGGGGCATGCGCGCCA +
Preference number: 5 (lower is better)
Translates to: RRGFQACLCWARSSCTHTPSSGS*SGACAP
Trigger: TGGCGCGCATGCCCCGGACAAGGAGCCTGAGCTGGG...AGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CAA 90 bp CTGAGGGCTGGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGCCCAGCTCAGGCTCCTaGTCCGGGGCATGCGCGCCA +
Preference number: 5 (lower is better)
Translates to: LRAGPGTSECCWRSVRLQPSSGS*SGACAP
Trigger: TGGCGCGCATGCCCCGGACAAGGAGCCTGAGCTGGG...CTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACCAGCCCTCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CAA 90 bp TCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGGCGGCGGGGGAGCTCCGGCACGATCTaGCGGATGTCCGGCGCCTCC +
Preference number: 5 (lower is better)
Translates to: SRRSPEMGSLGGSSRRRGSSGTI*RMSGAS
Trigger: GGAGGCGCCGGACATCCGCAAGATCGTGCCGGAGCT...CCCCCGCCGCCTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CAA 90 bp CACCAACCCGCCCCTTACCGAGACAGCGGGCGCACCAGCCTGGGCCACGTGAGCAGCTGCTCCTCCACCTaGTCCCAGCGCTCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: HQPAPYRDSGRTSLGHVSSCSST*SQRSRQ
Trigger: CTGCCTGGAGCGCTGGGACAAGGTGGAGGAGCAGCT...GCTCACGTGGCCCAGGCTGGTGCGCCCGCTGTCTCGGTAAGGGGCGGGTTGGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS GCA 90 bp CGGCCTCGCTGCCGTTCAGCTCCCGTGCAGGCTTCTCCAGGCCATTaGTGGGCTCCACTCCAGGGGCCTGCGTTACCCCCTCAGGGTCTC +
Preference number: 5 (lower is better)
Translates to: RPRCRSAPVQASPGH*WAPLQGPALPPQGL
Trigger: GAGACCCTGAGGGGGTAACGCAGGCCCCTGGAGTGGAGCCCAGCAATGGCCTGGAGAAGCCTGCACGGGAGCTGAACGGCAGCGAGGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS CCA 90 bp CTGTCGCTGGATAAGTCAAAGTCCAGGTCAGTGCCCGTGGCACCCTaGGCAGGCCGCTGTCCCGGTGCCACCCGGCCACCCTGCGCACAG +
Preference number: 5 (lower is better)
Translates to: LSLDKSKSRSVPVAP*AGRCPGATRPPCAQ
Trigger: CTGTGCGCAGGGTGGCCGGGTGGCACCGGGACAGCGGCCTGCCCAGGGTGCCACGGGCACTGACCTGGACTTTGACTTATCCAGCGACAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS CCA 90 bp CAGGCTGGGCCTTGGGAAGAACCGGCATCGGGTGGAACAAGGCGGTaGGGGGCACACCCTCCCGGTCGGGAAAGGCCGCAGGGCTGTTCT +
Preference number: 5 (lower is better)
Translates to: QAGPWEEPASGGTRR*GAHPPGRERPQGCS
Trigger: AGAACAGCCCTGCGGCCTTTCCCGACCGGGAGGGTGTGCCCCCCACCGCCTTGTTCCACCCGATGCCGGTTCTTCCCAAGGCCCAGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000075430.11
ENST00000299543.9
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS CCA 90 bp AGCTCTCCGACGTTGAGGGCGTCTGTGTGCGACGGCACAGCCCCGTaGTCCCTGAGACAGGCAGGTGAGGCGGGGCGGCCTGACCACAGT +
Preference number: 5 (lower is better)
Translates to: SSPTLRASVCDGTAP*SLRQAGEAGRPDHS
Trigger: ACTGTGGTCAGGCCGCCCCGCCTCACCTGCCTGTCTCAGGGACCACGGGGCTGTGCCGTCGCACACAGACGCCCTCAACGTCGGAGAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS-3UTR CAA 90 bp GGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTCCAGCGCCTGCCAGCTCTaGGCTGCTGGTGGGGGCCTG +
Preference number: 5 (lower is better)
Translates to: GGSRHVCAGLGARARTLSSACQL*AAGGGL
Trigger: CAGGCCCCCACCAGCAGCCAAGAGCTGGCAGGCGCT...GGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CAA 90 bp GCTCCAGGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGCCCAGCTCAGGCTCCTaGTCCGGGGCATGCGCGCCA +
Preference number: 5 (lower is better)
Translates to: APGCPTVTAFPGNGFPRRPSSGS*SGACAP
Trigger: TGGCGCGCATGCCCCGGACAAGGAGCCTGAGCTGGG...CCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CAA 90 bp GGCTGGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTAGCTCCGGCACGATCTaGCGGATGTCCGGCGCCTCC +
Preference number: 5 (lower is better)
Translates to: GWSGDVRVLLEVGQASVPSSGTI*RMSGAS
Trigger: GGAGGCGCCGGACATCCGCAAGATCGTGCCGGAGCT...AGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CAA 90 bp ACACCAACCCGCCCCTTACCGAGACAGCGGGCGCACCAGCCTGGGCCACGTGAGGCTCACATGAGGTCGTaGAGCTCCGCCTCCAGCGCC +
Preference number: 5 (lower is better)
Translates to: TPTRPLPRQRAHQPGPREAHMRS*SSASSA
Trigger: GGCGCTGGAGGCGGAGCTCAACGACCTCATGTGAGC...CTCACGTGGCCCAGGCTGGTGCGCCCGCTGTCTCGGTAAGGGGCGGGTTGGTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS GCA 90 bp CACTGCTGCTCTCGCTGTCGCTGGATAAGTCAAAGTCCAGGTCAGTaGCCGTGGCACCCTGGGCAGGCCGCTGTCCCGGTGCCACCCGGC +
Preference number: 5 (lower is better)
Translates to: HCCSRCRWISQSPGQ*PWHPGQAAVPVPPG
Trigger: GCCGGGTGGCACCGGGACAGCGGCCTGCCCAGGGTGCCACGGGCACTGACCTGGACTTTGACTTATCCAGCGACAGCGAGAGCAGCAGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS CCA 90 bp TGCTCTCGCTGTCGCTGGATAAGTCAAAGTCCAGGTCAGTGCCCGTaGCACCCTGGGCAGGCCGCTGTCCCGGTGCCACCCGGCCACCCT +
Preference number: 5 (lower is better)
Translates to: CSRCRWISQSPGQCP*HPGQAAVPVPPGHP
Trigger: AGGGTGGCCGGGTGGCACCGGGACAGCGGCCTGCCCAGGGTGCCACGGGCACTGACCTGGACTTTGACTTATCCAGCGACAGCGAGAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS CCA 90 bp CCGAACCTCAGCAGGCGGGAGGTGGGTACCGTCAGTGCCTCGATGTaGCGGCGGGAGAGGCTGAGCCCAGTGCCGGGAGGTGAACTCAAG +
Preference number: 5 (lower is better)
Translates to: PNLSRREVGTVSASM*RRERLSPVPGGELK
Trigger: CTTGAGTTCACCTCCCGGCACTGGGCTCAGCCTCTCCCGCCGCCACATCGAGGCACTGACGGTACCCACCTCCCGCCTGCTGAGGTTCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS-3UTR CAA 90 bp CTCCAGGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCTCCGGCACGATCTaGCGGATGTCCGGCGCCTCC +
Preference number: 5 (lower is better)
Translates to: LQAARQSRRSPEMGSLGGSSGTI*RMSGAS
Trigger: GGAGGCGCCGGACATCCGCAAGATCGTGCCGGAGCT...CCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CAA 90 bp TCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGGCGGCGGGGGACGTCTGCCAGCACCTaGCTCTTGAGCTCCGGCACG +
Preference number: 5 (lower is better)
Translates to: SRRSPEMGSLGGSSRRRGTSAST*LLSSGT
Trigger: CGTGCCGGAGCTCAAGAGCAAGGTGCTGGCAGACGT...CCCCCGCCGCCTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CAA 90 bp GGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCCCACGTCTGCCAGCACCTaGCTCTTGAGCTCCGGCACG +
Preference number: 5 (lower is better)
Translates to: GPGTSECCWRSVRLQSLPTSAST*LLSSGT
Trigger: CGTGCCGGAGCTCAAGAGCAAGGTGCTGGCAGACGT...GGGCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CAA 90 bp CAGGCTTCAGTCCCTGCCCGCTGCCCGCGCTCACATGAGGTCGTTGAGCTCCGCAGCTGCTCCTCCACCTaGTCCCAGCGCTCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: QASVPARCPRSHEVVELRSCSST*SQRSRQ
Trigger: CTGCCTGGAGCGCTGGGACAAGGTGGAGGAGCAGCT...GCGGAGCTCAACGACCTCATGTGAGCGCGGGCAGCGGGCAGGGACTGAAGCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
CDS-3UTR CAA 90 bp AGGATGGCAGCCCAGGCCACGTGGCGTGGACCCTGCGTAGGAGGCTGCAGGAAGGCTCACATGAGGTCGTaGAGCTCCGCCTCCAGCGCC +
Preference number: 5 (lower is better)
Translates to: RMAAQATWRGPCVGGCRKAHMRS*SSASSA
Trigger: GGCGCTGGAGGCGGAGCTCAACGACCTCATGTGAGC...CTTCCTGCAGCCTCCTACGCAGGGTCCACGCCACGTGGCCTGGGCTGCCATCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CAA 90 bp GGCCGCCCAGGAAAAGCAACGCCCCCTTGCCAGGATGCCAGTGGGAGGACGGCAGCTCACATGAGGTCGTaGAGCTCCGCCTCCAGCGCC +
Preference number: 5 (lower is better)
Translates to: GRPGKATPPCQDASGRTAAHMRS*SSASSA
Trigger: GGCGCTGGAGGCGGAGCTCAACGACCTCATGTGAGC...TGCCGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGGGCGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS TCA 90 bp GTCCAGGGACTCACCCGCAGTGACCCCCGACAGCTCGCTGTTCTGTaGCTCGGTCTCCGCCTCCTTCCTGTCGGCACAGCCGTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: VQGLTRSDPRQLAVL*LGLRLLPVGTAVAQ
Trigger: CTGGGCAACGGCTGTGCCGACAGGAAGGAGGCGGAGACCGAGTCACAGAACAGCGAGCTGTCGGGGGTCACTGCGGGTGAGTCCCTGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000075430.11
ENST00000299543.9
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS TCA 90 bp GGGAGGTGGGTACCGTCAGTGCCTCGATGTGGCGGCGGGAGAGGCTaGGCCCAGTGCCGGGAGGTGAACTCAAGTTCTCCCCTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: GRWVPSVPRCGGGRG*AQCREVNSSSPLLS
Trigger: GGAGAGGAGGGGAGAACTTGAGTTCACCTCCCGGCACTGGGCTCAGCCTCTCCCGCCGCCACATCGAGGCACTGACGGTACCCACCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS CCA 90 bp CCTCGCTGCCGTTCAGCTCCCGTGCAGGCTTCTCCAGGCCATTGCTaGGCTCCACTCCAGGGGCCTGCGTTACCCCCTCAGGGTCTCTCA +
Preference number: 5 (lower is better)
Translates to: PRCRSAPVQASPGHC*APLQGPALPPQGLS
Trigger: TGAGAGACCCTGAGGGGGTAACGCAGGCCCCTGGAGTGGAGCCCAGCAATGGCCTGGAGAAGCCTGCACGGGAGCTGAACGGCAGCGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS-3UTR CAA 90 bp CAGGCGGCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCATTCTCCAGGAAGTCCTaGCAGTGTGGACGCAGGCGC +
Preference number: 5 (lower is better)
Translates to: QAAGVPGMSVLGSELVHAFSRKS*QCGRRR
Trigger: GCGCCTGCGTCCACACTGCAAGGACTTCCTGGAGAA...TGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCGCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CAA 90 bp ACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGGCGGCGAGCTGCTCCTCCACCTaGTCCCAGCGCTCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: TVTAFPGNGFPRREQQAASCSST*SQRSRQ
Trigger: CTGCCTGGAGCGCTGGGACAAGGTGGAGGAGCAGCT...CGCCGCCTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CAA 90 bp GCCCAGGCCACGTGGCGTGGACCCTGCGTAGGAGGCTGCAGGAAGCTCCAGGCTAAAAGCAACGCCCCCTaGCCAGGATGCCAGTGGGAG +
Preference number: 5 (lower is better)
Translates to: AQATWRGPCVGGCRKLQAKSNAP*PGCQWE
Trigger: CTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTT...AGCCTGGAGCTTCCTGCAGCCTCCTACGCAGGGTCCACGCCACGTGGCCTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS TCA 90 bp AGGCCGCAGGGCTGTTCTCCCTCTGTGCCTTGGTGTGATCGTCCCTaGGCGGGAAGAGCTGCTCCTCCACCTTGTCCCAGCGCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: RPQGCSPSVPWCDRP*AGRAAPPPCPSAPG
Trigger: GCCTGGAGCGCTGGGACAAGGTGGAGGAGCAGCTCTTCCCGCTCAGGGACGATCACACCAAGGCACAGAGGGAGAACAGCCCTGCGGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000075430.11
ENST00000299543.9
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS GCA 90 bp CCACAGCCAGTCAGGGTTGACCACGTGCAGGTGTCCGCACTCCTGTaGCTGCAGCACCTTCTCTGTGCCAGCTCGCGCGGCGATCAGGTG +
Preference number: 5 (lower is better)
Translates to: PQPVRVDHVQVSALL*LQHLLCASSRGDQV
Trigger: CACCTGATCGCCGCGCGAGCTGGCACAGAGAAGGTGCTGCAGGCACAGGAGTGCGGACACCTGCACGTGGTCAACCCTGACTGGCTGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000075430.11
ENST00000299543.9
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS-3UTR CAA 90 bp CAGGCTTCAGTCCCTGCCCGCTGCCCGCGCTCACATGAGGTCGTTGAGCTCCGCGCCAGCACCTTGCTCTaGAGCTCCGGCACGATCTTG +
Preference number: 5 (lower is better)
Translates to: QASVPARCPRSHEVVELRASTLL*SSGTIL
Trigger: CAAGATCGTGCCGGAGCTCAAGAGCAAGGTGCTGGC...GCGGAGCTCAACGACCTCATGTGAGCGCGGGCAGCGGGCAGGGACTGAAGCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
CDS-3UTR CAA 90 bp CTGGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGCGCCAGCACCTTGCTCTaGAGCTCCGGCACGATCTTG +
Preference number: 5 (lower is better)
Translates to: LVRGRPSAAGGRSGFSPCASTLL*SSGTIL
Trigger: CAAGATCGTGCCGGAGCTCAAGAGCAAGGTGCTGGC...GCAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CAA 90 bp CATGAGGTCGTTGAGCTCCGCCTCCAGCGCCTTGGCCATCTCGTCGGCCTCGGAACGTCTGCCAGCACCTaGCTCTTGAGCTCCGGCACG +
Preference number: 5 (lower is better)
Translates to: HEVVELRLQRLGHLVGLGTSAST*LLSSGT
Trigger: CGTGCCGGAGCTCAAGAGCAAGGTGCTGGCAGACGT...TCCGAGGCCGACGAGATGGCCAAGGCGCTGGAGGCGGAGCTCAACGACCTCATG
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000075430.11
ENST00000591598.5
CDS-3UTR CAA 90 bp AAAACACACCAACCCGCCCCTTACCGAGACAGCGGGCGCACCAGCCTGGGCCACCACAGCCAGTCAGGGTaGACCACGTGCAGGTGTCCG +
Preference number: 5 (lower is better)
Translates to: KTHQPAPYRDSGRTSLGHHSQSG*TTCRCP
Trigger: CGGACACCTGCACGTGGTCAACCCTGACTGGCTGTG...GTGGCCCAGGCTGGTGCGCCCGCTGTCTCGGTAAGGGGCGGGTTGGTGTGTTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CAA 90 bp GCTGGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCAGTCCCTGAAAAGCAACGCCCCCTaGCCAGGATGCCAGTGGGAG +
Preference number: 5 (lower is better)
Translates to: AGPGTSECCWRSVRLQSLKSNAP*PGCQWE
Trigger: CTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTT...CAGGGACTGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS TCA 90 bp CCACCTTGTCCCAGCGCTCCAGGCAGCTCCACAGCCAGTCAGGGTTaGCCACGTGCAGGTGTCCGCACTCCTGTGCCTGCAGCACCTTCT +
Preference number: 5 (lower is better)
Translates to: PPCPSAPGSSTASQG*PRAGVRTPVPAAPS
Trigger: AGAAGGTGCTGCAGGCACAGGAGTGCGGACACCTGCACGTGGTCAACCCTGACTGGCTGTGGAGCTGCCTGGAGCGCTGGGACAAGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000075430.11
ENST00000299543.9
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS TCA 90 bp GACGCGGACGGGAGTGGCAACAGAGGCGGCAGGCAAGTGAGCAGGTaGTGGGAGTACCGCATCCAAACCTCAGCCTCCCCGAACCTCAGC +
Preference number: 5 (lower is better)
Translates to: DADGSGNRGGRQVSR*WEYRIQTSASPNLS
Trigger: GCTGAGGTTCGGGGAGGCTGAGGTTTGGATGCGGTACTCCCATCACCTGCTCACTTGCCTGCCGCCTCTGTTGCCACTCCCGTCCGCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS GCA 90 bp CCTTGGCCATCTCGTCGGCCTCGGAGCTGCTGCCCTCATCCTCGTTaGTGGACTCCCTGCTGGACTCGCTGGCGGCGTCCTCTTCATTCA +
Preference number: 5 (lower is better)
Translates to: PWPSRRPRSCCPHPR*WTPCWTRWRRPLHS
Trigger: TGAATGAAGAGGACGCCGCCAGCGAGTCCAGCAGGGAGTCCAGCAACGAGGATGAGGGCAGCAGCTCCGAGGCCGACGAGATGGCCAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000075430.11
ENST00000299543.9
ENST00000590599.2
ENST00000591598.5
ENST00000613122.5
CDS CCA 90 bp CAGCTTGCTCGGAGCTCACCATCAACTCCGGCACGCTGTGCACCATaGACACGGTCGCCGTGGACAGCGGCACCTGCTGCTTCCCGTTCT +
Preference number: 5 (lower is better)
Translates to: QLARSSPSTPARCAP*TRSPWTAAPAASRS
Trigger: AGAACGGGAAGCAGCAGGTGCCGCTGTCCACGGCGACCGTGTCCATGGTGCACAGCGTGCCGGAGTTGATGGTGAGCTCCGAGCAAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000075430.11
ENST00000590635.5
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632905.1
ENST00000632932.1
CDS CCA 90 bp CAGCTCGTACAGCTTGGCGATCTTCTCCAGGAAGTCCTTGCAGTGTaGACGCAGGCGCGTGTGCAGCATGGGCTCACCCCGGCCCAGCTG +
Preference number: 5 (lower is better)
Translates to: QLVQLGDLLQEVLAV*TQARVQHGLTPAQL
Trigger: CAGCTGGGCCGGGGTGAGCCCATGCTGCACACGCGCCTGCGTCCACACTGCAAGGACTTCCTGGAGAAGATCGCCAAGCTGTACGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS CCA 90 bp CGGCCTCGGAGCTGCTGCCCTCATCCTCGTTGCTGGACTCCCTGCTaGACTCGCTGGCGGCGTCCTCTTCATTCAGCTTCCTCTTGTGGC +
Preference number: 5 (lower is better)
Translates to: RPRSCCPHPRCWTPC*TRWRRPLHSASSCG
Trigger: GCCACAAGAGGAAGCTGAATGAAGAGGACGCCGCCAGCGAGTCCAGCAGGGAGTCCAGCAACGAGGATGAGGGCAGCAGCTCCGAGGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000075430.11
ENST00000299543.9
ENST00000590599.2
ENST00000591598.5
ENST00000613122.5
CDS CCA 90 bp TGGCCATCTCGTCGGCCTCGGAGCTGCTGCCCTCATCCTCGTTGCTaGACTCCCTGCTGGACTCGCTGGCGGCGTCCTCTTCATTCAGCT +
Preference number: 5 (lower is better)
Translates to: WPSRRPRSCCPHPRC*TPCWTRWRRPLHSA
Trigger: AGCTGAATGAAGAGGACGCCGCCAGCGAGTCCAGCAGGGAGTCCAGCAACGAGGATGAGGGCAGCAGCTCCGAGGCCGACGAGATGGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000075430.11
ENST00000299543.9
ENST00000590599.2
ENST00000591598.5
ENST00000613122.5
CDS CCA 90 bp GGGAAGAGCACTTTATGTCCAGCATGGATCACGTCGGAGTGGTGTTaGCGGGCAGCTCTCCCGGGGGCTCCCATCCCAAGAGCACGGCCC +
Preference number: 5 (lower is better)
Translates to: GKSTLCPAWITSEWC*RAALPGAPIPRARP
Trigger: GGGCCGTGCTCTTGGGATGGGAGCCCCCGGGAGAGCTGCCCGCCAACACCACTCCGACGTGATCCATGCTGGACATAAAGTGCTCTTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS-3UTR CAA 90 bp CAGGCGGCGGGGGTTCCAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACAACTGGGTGAGGTCTaGGCCACATTCAGCACACAG +
Preference number: 5 (lower is better)
Translates to: QAAGVPGMSVLGSELVHAQLGEV*ATFSTQ
Trigger: CTGTGTGCTGAATGTGGCCAAGACCTCACCCAGTTG...TGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTGGAACCCCCGCCGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CAA 90 bp ACTGAGGGCTGGTCCGGGGACGTCCGAGTGCTGCTGGAGGTCGGTCAGGCTTCATTCTCCAGGAAGTCCTaGCAGTGTGGACGCAGGCGC +
Preference number: 5 (lower is better)
Translates to: TEGWSGDVRVLLEVGQASFSRKS*QCGRRR
Trigger: GCGCCTGCGTCCACACTGCAAGGACTTCCTGGAGAA...TGAAGCCTGACCGACCTCCAGCAGCACTCGGACGTCCCCGGACCAGCCCTCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CAA 90 bp ACACCAACCCGCCCCTTACCGAGACAGCGGGCGCACCAGCCTGGGCCACGTGAGTGCAGCTCGTACAGCTaGGCGATCTTCTCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: TPTRPLPRQRAHQPGPRECSSYS*AIFSRK
Trigger: CTTCCTGGAGAAGATCGCCAAGCTGTACGAGCTGCA...CTCACGTGGCCCAGGCTGGTGCGCCCGCTGTCTCGGTAAGGGGCGGGTTGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CAA 90 bp GCCCAGGCCACGTGGCGTGGACCCTGCGTAGGAGGCTGCAGGAAGCTCCAGGCTTGCAGCTCGTACAGCTaGGCGATCTTCTCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: AQATWRGPCVGGCRKLQACSSYS*AIFSRK
Trigger: CTTCCTGGAGAAGATCGCCAAGCTGTACGAGCTGCA...AGCCTGGAGCTTCCTGCAGCCTCCTACGCAGGGTCCACGCCACGTGGCCTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CAA 90 bp AAGAAAGCAGCGTGGACCGAGACTGAGGGCTGGTCCGGGGACGTCCGAGTGCTGCACAGCCAGTCAGGGTaGACCACGTGCAGGTGTCCG +
Preference number: 5 (lower is better)
Translates to: KKAAWTETEGWSGDVRVLHSQSG*TTCRCP
Trigger: CGGACACCTGCACGTGGTCAACCCTGACTGGCTGTG...CAGCACTCGGACGTCCCCGGACCAGCCCTCAGTCTCGGTCCACGCTGCTTTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CAA 90 bp CAGGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAAAAGCAACGCCCCCTaGCCAGGATGCCAGTGGGAG +
Preference number: 5 (lower is better)
Translates to: QAARQSRRSPEMGSLGGSKSNAP*PGCQWE
Trigger: CTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTT...GCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CAA 90 bp CACCAACCCGCCCCTTACCGAGACAGCGGGCGCACCAGCCTGGGCCACGTGAGCGAGTGTACAGCGGCATaGTCTCAGACATACTGGGCT +
Preference number: 5 (lower is better)
Translates to: HQPAPYRDSGRTSLGHVSECTAA*SQTYWA
Trigger: AGCCCAGTATGTCTGAGACAATGCCGCTGTACACTC...GCTCACGTGGCCCAGGCTGGTGCGCCCGCTGTCTCGGTAAGGGGCGGGTTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591598.5
ENST00000613122.5
CDS TCA 90 bp ACACGTGTGACGCGGACGGGAGTGGCAACAGAGGCGGCAGGCAAGTaGGCAGGTGATGGGAGTACCGCATCCAAACCTCAGCCTCCCCGA +
Preference number: 5 (lower is better)
Translates to: TRVTRTGVATEAAGK*AGDGSTASKPQPPR
Trigger: TCGGGGAGGCTGAGGTTTGGATGCGGTACTCCCATCACCTGCTCACTTGCCTGCCGCCTCTGTTGCCACTCCCGTCCGCGTCACACGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS TCA 90 bp CAATTTGGGAAACATGCAGAGAGGGCGACTCCTGAACACCTGGGGTaGGCTCAGCCGGCCCCACGCCTGACACGTGTGACGCGGACGGGA +
Preference number: 5 (lower is better)
Translates to: QFGKHAERATPEHLG*AQPAPRLTRVTRTG
Trigger: TCCCGTCCGCGTCACACGTGTCAGGCGTGGGGCCGGCTGAGCTCACCCCAGGTGTTCAGGAGTCGCCCTCTCTGCATGTTTCCCAAATTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS TCA 90 bp CTGGGCACGCCTCCAATTTGGGAAACATGCAGAGAGGGCGACTCCTaGACACCTGGGGTGAGCTCAGCCGGCCCCACGCCTGACACGTGT +
Preference number: 5 (lower is better)
Translates to: LGTPPIWETCREGDS*TPGVSSAGPTPDTC
Trigger: ACACGTGTCAGGCGTGGGGCCGGCTGAGCTCACCCCAGGTGTTCAGGAGTCGCCCTCTCTGCATGTTTCCCAAATTGGAGGCGTGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS GCA 90 bp GGCACGCTGTGCACCATGGACACGGTCGCCGTGGACAGCGGCACCTaGTGCTTCCCGTTCTTACTCTGCAACTGGGTGAGGTCTTGGCCA +
Preference number: 5 (lower is better)
Translates to: GTLCTMDTVAVDSGT*CFPFLLCNWVRSWP
Trigger: TGGCCAAGACCTCACCCAGTTGCAGAGTAAGAACGGGAAGCAGCAGGTGCCGCTGTCCACGGCGACCGTGTCCATGGTGCACAGCGTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000075430.11
ENST00000590635.5
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632905.1
ENST00000632932.1
CDS GCA 90 bp AGACGTGCAGCTCGTACAGCTTGGCGATCTTCTCCAGGAAGTCCTTaGAGTGTGGACGCAGGCGCGTGTGCAGCATGGGCTCACCCCGGC +
Preference number: 5 (lower is better)
Translates to: RRAARTAWRSSPGSP*SVDAGACAAWAHPG
Trigger: GCCGGGGTGAGCCCATGCTGCACACGCGCCTGCGTCCACACTGCAAGGACTTCCTGGAGAAGATCGCCAAGCTGTACGAGCTGCACGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS GCA 90 bp CGTCGGCCTCGGAGCTGCTGCCCTCATCCTCGTTGCTGGACTCCCTaGTGGACTCGCTGGCGGCGTCCTCTTCATTCAGCTTCCTCTTGT +
Preference number: 5 (lower is better)
Translates to: RRPRSCCPHPRCWTP*WTRWRRPLHSASSC
Trigger: ACAAGAGGAAGCTGAATGAAGAGGACGCCGCCAGCGAGTCCAGCAGGGAGTCCAGCAACGAGGATGAGGGCAGCAGCTCCGAGGCCGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000075430.11
ENST00000299543.9
ENST00000590599.2
ENST00000591598.5
ENST00000613122.5
CDS CCA 90 bp GCTCGGCCGATGACTAGCGGAGGGAAGAGCACTTTATGTCCAGCATaGATCACGTCGGAGTGGTGTTGGCGGGCAGCTCTCCCGGGGGCT +
Preference number: 5 (lower is better)
Translates to: ARPMTSGGKSTLCPA*ITSEWCWRAALPGA
Trigger: AGCCCCCGGGAGAGCTGCCCGCCAACACCACTCCGACGTGATCCATGCTGGACATAAAGTGCTCTTCCCTCCGCTAGTCATCGGCCGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS CCA 90 bp GGCCGTGCCACAGGGACGCTCGCTAAGATGTCCACCCGCTCGCTCTaGGCACGCCTCCAATTTGGGAAACATGCAGAGAGGGCGACTCCT +
Preference number: 5 (lower is better)
Translates to: GRATGTLAKMSTRSL*ARLQFGKHAERATP
Trigger: AGGAGTCGCCCTCTCTGCATGTTTCCCAAATTGGAGGCGTGCCCAGAGCGAGCGGGTGGACATCTTAGCGAGCGTCCCTGTGGCACGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS-3UTR CAA 90 bp AAAGGCCGCCCAGGAAAAGCAACGCCCCCTTGCCAGGATGCCAGTGGGAGGACGTTCTCCAGGAAGTCCTaGCAGTGTGGACGCAGGCGC +
Preference number: 5 (lower is better)
Translates to: KGRPGKATPPCQDASGRTFSRKS*QCGRRR
Trigger: GCGCCTGCGTCCACACTGCAAGGACTTCCTGGAGAA...CGTCCTCCCACTGGCATCCTGGCAAGGGGGCGTTGCTTTTCCTGGGCGGCCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS TCA 90 bp TCGCTGTCGCTGTCGTCGCTGCCTTCTCCAAGGATGTCGTCCACCTaGCAAACAGCCAAGAGTCAGCGACAGACCTCCTTCCCGGGCCCC +
Preference number: 5 (lower is better)
Translates to: SLSLSSLPSPRMSST*QTAKSQRQTSFPGP
Trigger: GGGGCCCGGGAAGGAGGTCTGTCGCTGACTCTTGGCTGTTTGTCAGGTGGACGACATCCTTGGAGAAGGCAGCGACGACAGCGACAGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS CCA 90 bp TCACCATCAACTCCGGCACGCTGTGCACCATGGACACGGTCGCCGTaGACAGCGGCACCTGCTGCTTCCCGTTCTTACTCTGCAACTGGG +
Preference number: 5 (lower is better)
Translates to: SPSTPARCAPWTRSP*TAAPAASRSYSATG
Trigger: CCCAGTTGCAGAGTAAGAACGGGAAGCAGCAGGTGCCGCTGTCCACGGCGACCGTGTCCATGGTGCACAGCGTGCCGGAGTTGATGGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000075430.11
ENST00000590635.5
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632905.1
ENST00000632932.1
CDS CCA 90 bp AGGAGGACTTCGTGCCCTCGGACTCACTGCTGCTCTCGCTGTCGCTaGATAAGTCAAAGTCCAGGTCAGTGCCCGTGGCACCCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: RRTSCPRTHCCSRCR*ISQSPGQCPWHPGQ
Trigger: CTGCCCAGGGTGCCACGGGCACTGACCTGGACTTTGACTTATCCAGCGACAGCGAGAGCAGCAGTGAGTCCGAGGGCACGAAGTCCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS CCA 90 bp AGCGGAGGGAAGAGCACTTTATGTCCAGCATGGATCACGTCGGAGTaGTGTTGGCGGGCAGCTCTCCCGGGGGCTCCCATCCCAAGAGCA +
Preference number: 5 (lower is better)
Translates to: SGGKSTLCPAWITSE*CWRAALPGAPIPRA
Trigger: TGCTCTTGGGATGGGAGCCCCCGGGAGAGCTGCCCGCCAACACCACTCCGACGTGATCCATGCTGGACATAAAGTGCTCTTCCCTCCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS-3UTR CAA 90 bp AAAACACACCAACCCGCCCCTTACCGAGACAGCGGGCGCACCAGCCTGGGCCACTGCAGCTCGTACAGCTaGGCGATCTTCTCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: KTHQPAPYRDSGRTSLGHCSSYS*AIFSRK
Trigger: CTTCCTGGAGAAGATCGCCAAGCTGTACGAGCTGCA...GTGGCCCAGGCTGGTGCGCCCGCTGTCTCGGTAAGGGGCGGGTTGGTGTGTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS TCA 90 bp GTTCGGAGCAGTCGAGGCCGAGTCCAGAGTCACAGAGACTCGGTGTaGAGCCGCTTCGATCAGAAATCACAGCTCAGCCCCCGAGCCCAC +
Preference number: 5 (lower is better)
Translates to: VRSSRGRVQSHRDSV*SRFDQKSQLSPRAH
Trigger: GTGGGCTCGGGGGCTGAGCTGTGATTTCTGATCGAAGCGGCTTCACACCGAGTCTCTGTGACTCTGGACTCGGCCTCGACTGCTCCGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS GCA 90 bp CATCAGAGGCGGAGGAGGAGGACTTCGTGCCCTCGGACTCACTGCTaGTCTCGCTGTCGCTGGATAAGTCAAAGTCCAGGTCAGTGCCCG +
Preference number: 5 (lower is better)
Translates to: HQRRRRRTSCPRTHC*SRCRWISQSPGQCP
Trigger: CGGGCACTGACCTGGACTTTGACTTATCCAGCGACAGCGAGAGCAGCAGTGAGTCCGAGGGCACGAAGTCCTCCTCCTCCGCCTCTGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS GCA 90 bp GCCCCCGAGCCCACATGGAGGCCGACGCATCCACCCCGTCCACTCTaGAATTTCAAACTCATCGCCACGTGTCCAGCTAGTCACAGCACA +
Preference number: 5 (lower is better)
Translates to: APEPTWRPTHPPRPL*NFKLIATCPASHST
Trigger: TGTGCTGTGACTAGCTGGACACGTGGCGATGAGTTTGAAATTGCAGAGTGGACGGGGTGGATGCGTCGGCCTCCATGTGGGCTCGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS-3UTR CAA 90 bp GAAGCTCCAGGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGCAACTGGGTGAGGTCTaGGCCACATTCAGCACACAG +
Preference number: 5 (lower is better)
Translates to: EAPGCPTVTAFPGNGFPRQLGEV*ATFSTQ
Trigger: CTGTGTGCTGAATGTGGCCAAGACCTCACCCAGTTG...CCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTGGAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CAA 90 bp CAGGCTGCCCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCGACAGTGCTGCTCGGTaGTGTGAATCAACGTCTGGT +
Preference number: 5 (lower is better)
Translates to: QAARQSRRSPEMGSLGGSDSAAR*CESTSG
Trigger: ACCAGACGTTGATTCACACAACCGAGCAGCACTGTC...GCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGGGCAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CAA 90 bp CATGAGGTCGTTGAGCTCCGCCTCCAGCGCCTTGGCCATCTCGTCGGCCTCGGAGAGTGTACAGCGGCATaGTCTCAGACATACTGGGCT +
Preference number: 5 (lower is better)
Translates to: HEVVELRLQRLGHLVGLGECTAA*SQTYWA
Trigger: AGCCCAGTATGTCTGAGACAATGCCGCTGTACACTC...TCCGAGGCCGACGAGATGGCCAAGGCGCTGGAGGCGGAGCTCAACGACCTCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591598.5
CDS GCA 90 bp CCTGCGATGGTGTGTGCGTACAGCCGGCTGCCGAAGGTGAAGACGTaGAGCTCGTACAGCTTGGCGATCTTCTCCAGGAAGTCCTTGCAG +
Preference number: 5 (lower is better)
Translates to: PAMVCAYSRLPKVKT*SSYSLAIFSRKSLQ
Trigger: CTGCAAGGACTTCCTGGAGAAGATCGCCAAGCTGTACGAGCTGCACGTCTTCACCTTCGGCAGCCGGCTGTACGCACACACCATCGCAGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS CCA 90 bp AGGTCTTGGCCACATTCAGCACACAGGCCTTTCATGACAACCGGGTaGCTGCATCCTTCCAACCTCACCAGAACCGCTCCTGGGGCGACC +
Preference number: 5 (lower is better)
Translates to: RSWPHSAHRPFMTTG*LHPSNLTRTAPGAT
Trigger: GGTCGCCCCAGGAGCGGTTCTGGTGAGGTTGGAAGGATGCAGCCACCCGGTTGTCATGAAAGGCCTGTGTGCTGAATGTGGCCAAGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS CCA 90 bp TCTCCAGGAAGTCCTTGCAGTGTGGACGCAGGCGCGTGTGCAGCATaGGCTCACCCCGGCCCAGCTGGAAGTGAAAGATGCCTTTATTCG +
Preference number: 5 (lower is better)
Translates to: SPGSPCSVDAGACAA*AHPGPAGSERCLYS
Trigger: CGAATAAAGGCATCTTTCACTTCCAGCTGGGCCGGGGTGAGCCCATGCTGCACACGCGCCTGCGTCCACACTGCAAGGACTTCCTGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS-3UTR CAA 90 bp CATGTCTCGTGGGACCCCCAAAGCCGTCCCCTAAGGAATGTGCTCTGGTACACACACAGCCAGTCAGGGTaGACCACGTGCAGGTGTCCG +
Preference number: 5 (lower is better)
Translates to: HVSWDPQSRPLRNVLWYTHSQSG*TTCRCP
Trigger: CGGACACCTGCACGTGGTCAACCCTGACTGGCTGTG...TGTGTACCAGAGCACATTCCTTAGGGGACGGCTTTGGGGGTCCCACGAGACATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS GCA 90 bp TCCAAGTCCACCATGAGCACCAGCTTCCGGTTTCGGTGCAGTCGCTaGTGGTCTTCTCTTCCCAGCTGTTCAGCTTGCTCGGAGCTCACC +
Preference number: 5 (lower is better)
Translates to: SKSTMSTSFRFRCSR*WSSLPSCSACSELT
Trigger: GGTGAGCTCCGAGCAAGCTGAACAGCTGGGAAGAGAAGACCAGCAGCGACTGCACCGAAACCGGAAGCTGGTGCTCATGGTGGACTTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000075430.11
ENST00000590635.5
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632905.1
ENST00000632932.1
CDS GCA 90 bp TTTTCCCCTCGCTTTCGCCATCAGAGGCGGAGGAGGAGGACTTCGTaGCCTCGGACTCACTGCTGCTCTCGCTGTCGCTGGATAAGTCAA +
Preference number: 5 (lower is better)
Translates to: FSPRFRHQRRRRRTS*PRTHCCSRCRWISQ
Trigger: TTGACTTATCCAGCGACAGCGAGAGCAGCAGTGAGTCCGAGGGCACGAAGTCCTCCTCCTCCGCCTCTGATGGCGAAAGCGAGGGGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS CCA 90 bp GAAGCCGCTTCGATCAGAAATCACAGCTCAGCCCCCGAGCCCACATaGAGGCCGACGCATCCACCCCGTCCACTCTGCAATTTCAAACTC +
Preference number: 5 (lower is better)
Translates to: EAASIRNHSSAPEPT*RPTHPPRPLCNFKL
Trigger: GAGTTTGAAATTGCAGAGTGGACGGGGTGGATGCGTCGGCCTCCATGTGGGCTCGGGGGCTGAGCTGTGATTTCTGATCGAAGCGGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS-3UTR CAA 90 bp CACGTGGCGTGGACCCTGCGTAGGAGGCTGCAGGAAGCTCCAGGCTGCCCGACATTCACAGTTATCAGATaGGGGGCAAACTTCCAGACA +
Preference number: 5 (lower is better)
Translates to: HVAWTLRRRLQEAPGCPTFTVIR*GANFQT
Trigger: TGTCTGGAAGTTTGCCCCCAATCTGATAACTGTGAA...TGTCGGGCAGCCTGGAGCTTCCTGCAGCCTCCTACGCAGGGTCCACGCCACGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CAA 90 bp GCTCGGAGCTCGTGCACGCACACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGGCCAGCACCTTGCTCTaGAGCTCCGGCACGATCTTG +
Preference number: 5 (lower is better)
Translates to: ARSSCTHTVLLKLLVHVSASTLL*SSGTIL
Trigger: CAAGATCGTGCCGGAGCTCAAGAGCAAGGTGCTGGC...CGAGACATGGACTAGGAGTTTAAGCAGGACAGTGTGCGTGCACGAGCTCCGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS TCA 90 bp CACAGAAAGAACTTACACCCAGGAGCGAGGGGCCCGCTCGGCCGATaGCTAGCGGAGGGAAGAGCACTTTATGTCCAGCATGGATCACGT +
Preference number: 5 (lower is better)
Translates to: HRKNLHPGARGPLGR*LAEGRALYVQHGSR
Trigger: ACGTGATCCATGCTGGACATAAAGTGCTCTTCCCTCCGCTAGTCATCGGCCGAGCGGGCCCCTCGCTCCTGGGTGTAAGTTCTTTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS GCA 90 bp TTCCATCCTGGGGTTTTCAGAGCCAGGCGCACACGCGTGTCCACTTaGCCGCCCATCCCAGAACACAAGGGTAGATTCAAACATGGCTGG +
Preference number: 5 (lower is better)
Translates to: FHPGVFRARRTRVST*PPIPEHKGRFKHGW
Trigger: CCAGCCATGTTTGAATCTACCCTTGTGTTCTGGGATGGGCGGGCAAGTGGACACGCGTGTGCGCCTGGCTCTGAAAACCCCAGGATGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590635.5
ENST00000632905.1
CDS-3UTR CAA 90 bp CGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGGCGGTTCACAGTTATCAGATaGGGGGCAAACTTCCAGACA +
Preference number: 5 (lower is better)
Translates to: RQSRRSPEMGSLGGSSRRFTVIR*GANFQT
Trigger: TGTCTGGAAGTTTGCCCCCAATCTGATAACTGTGAA...CCGCCTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CAA 90 bp CCGACAGTCACGGCGTTCCCCGGAAATGGGTTCCCTAGGAGGGAGCAGCAGGCGATGTCGTCCACCTCTTaGTCCATACTCTCTAAATCC +
Preference number: 5 (lower is better)
Translates to: PTVTAFPGNGFPRREQQAMSSTS*SILSKS
Trigger: GGATTTAGAGAGTATGGACAAAGAGGTGGACGACAT...CGCCTGCTGCTCCCTCCTAGGGAACCCATTTCCGGGGAACGCCGTGACTGTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613122.5
CDS TCA 90 bp AGTGCTGCTCGGTTGTGTGAATCAACGTCTGGTCCAAGTCCACCATaGGCACCAGCTTCCGGTTTCGGTGCAGTCGCTGCTGGTCTTCTC +
Preference number: 5 (lower is better)
Translates to: SAARLCESTSGPSPP*APASGFGAVAAGLL
Trigger: GAGAAGACCAGCAGCGACTGCACCGAAACCGGAAGCTGGTGCTCATGGTGGACTTGGACCAGACGTTGATTCACACAACCGAGCAGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS TCA 90 bp CTAAAAAGCCTGCGATGGTGTGTGCGTACAGCCGGCTGCCGAAGGTaGAGACGTGCAGCTCGTACAGCTTGGCGATCTTCTCCAGGAAGT +
Preference number: 5 (lower is better)
Translates to: LKSLRWCVRTAGCRR*RRAARTAWRSSPGS
Trigger: ACTTCCTGGAGAAGATCGCCAAGCTGTACGAGCTGCACGTCTTCACCTTCGGCAGCCGGCTGTACGCACACACCATCGCAGGCTTTTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS TCA 90 bp GGCCTGCGTTACCCCCTCAGGGTCTCTCACGGGCGGAGATGGCTCTaGGACCTCAGTGCCTCGAGAATGATTTACTTTCTTTCTCGTCTG +
Preference number: 5 (lower is better)
Translates to: GLRYPLRVSHGRRWL*DLSASRMIYFLSRL
Trigger: CAGACGAGAAAGAAAGTAAATCATTCTCGAGGCACTGAGGTCTCAGAGCCATCTCCGCCCGTGAGAGACCCTGAGGGGGTAACGCAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS TCA 90 bp CCGGCACGATCTTGCGGATGTCCGGCGCCTCCTCGATCTCCTTGTTaGGGTAGCGGTCATACTTGGCATAGTAGTCAGTGTGTACACGGA +
Preference number: 5 (lower is better)
Translates to: PARSCGCPAPPRSPC*GSGHTWHSSQCVHG
Trigger: TCCGTGTACACACTGACTACTATGCCAAGTATGACCGCTACCTCAACAAGGAGATCGAGGAGGCGCCGGACATCCGCAAGATCGTGCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000075430.11
ENST00000299543.9
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS GCA 90 bp TCAACCCTCGCACACGGCCTCCGCCTGTTAGTTCTCACCAGTCACTaGAGGCTCCCAGATCATTTTAGGTACCTTCCCCTTTCTGTGGCG +
Preference number: 5 (lower is better)
Translates to: STLAHGLRLLVLTSH*RLPDHFRYLPLSVA
Trigger: CGCCACAGAAAGGGGAAGGTACCTAAAATGATCTGGGAGCCTGCAGTGACTGGTGAGAACTAACAGGCGGAGGCCGTGTGCGAGGGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587623.1
ENST00000632255.1
CDS GCA 90 bp CTGCTTCTCTGTGGCACTCTCACACCCTGCGCTGGTGAATGCAGATaGCCTTCCTGTGGACACGCTAAAGGCACAGGTACAGTCTGTCAG +
Preference number: 5 (lower is better)
Translates to: LLLCGTLTPCAGECR*PSCGHAKGTGTVCQ
Trigger: CTGACAGACTGTACCTGTGCCTTTAGCGTGTCCACAGGAAGGGCATCTGCATTCACCAGCGCAGGGTGTGAGAGTGCCACAGAGAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587623.1
ENST00000632255.1
CDS GCA 90 bp CCAGTGCCGGGAGGTGAACTCAAGTTCTCCCCTCCTCTCCTGAACTaGACGGAGATGGGAGAAGGACGCACAGAAAGAACTTACACCCAG +
Preference number: 5 (lower is better)
Translates to: PVPGGELKFSPPLLN*TEMGEGRTERTYTQ
Trigger: CTGGGTGTAAGTTCTTTCTGTGCGTCCTTCTCCCATCTCCGTGCAGTTCAGGAGAGGAGGGGAGAACTTGAGTTCACCTCCCGGCACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS CCA 90 bp AGGTCTTGGCCACATTCAGCACACAGGCCTTTCATGACAACCGGGTaGCTGCATCCTTCCAACCTCACCAGAACCGCTCTGTCTAGGCCA +
Preference number: 5 (lower is better)
Translates to: RSWPHSAHRPFMTTG*LHPSNLTRTALSRP
Trigger: TGGCCTAGACAGAGCGGTTCTGGTGAGGTTGGAAGGATGCAGCCACCCGGTTGTCATGAAAGGCCTGTGTGCTGAATGTGGCCAAGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590635.5
ENST00000632905.1
CDS-3UTR CAA 90 bp CATGTCTCGTGGGACCCCCAAAGCCGTCCCCTAAGGAATGTGCTCTGGTACACACAACTGGGTGAGGTCTaGGCCACATTCAGCACACAG +
Preference number: 5 (lower is better)
Translates to: HVSWDPQSRPLRNVLWYTQLGEV*ATFSTQ
Trigger: CTGTGTGCTGAATGTGGCCAAGACCTCACCCAGTTG...TGTGTACCAGAGCACATTCCTTAGGGGACGGCTTTGGGGGTCCCACGAGACATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CAA 90 bp GCTCGGAGCTCGTGCACGCACACTGTCCTGCTTAAACTCCTAGTCCATGTCTCGGACAGTGCTGCTCGGTaGTGTGAATCAACGTCTGGT +
Preference number: 5 (lower is better)
Translates to: ARSSCTHTVLLKLLVHVSDSAAR*CESTSG
Trigger: ACCAGACGTTGATTCACACAACCGAGCAGCACTGTC...CGAGACATGGACTAGGAGTTTAAGCAGGACAGTGTGCGTGCACGAGCTCCGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS GCA 90 bp GTTTTTCTGCTTCTCTGTGGCACTCTCACACCCTGCGCTGGTGAATaGAGATGCCCTTCCTGTGGACACGCTAAAGGCACAGGTACAGTC +
Preference number: 5 (lower is better)
Translates to: VFLLLCGTLTPCAGE*RCPSCGHAKGTGTV
Trigger: GACTGTACCTGTGCCTTTAGCGTGTCCACAGGAAGGGCATCTGCATTCACCAGCGCAGGGTGTGAGAGTGCCACAGAGAAGCAGAAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587623.1
ENST00000632255.1
CDS CCA 90 bp ACTTGCCCGCCCATCCCAGAACACAAGGGTAGATTCAAACATGGCTaGACACTTCGGTGCTACGGAAACATATCCCCTTCTGGGGTCAGA +
Preference number: 5 (lower is better)
Translates to: TCPPIPEHKGRFKHG*TLRCYGNISPSGVR
Trigger: TCTGACCCCAGAAGGGGATATGTTTCCGTAGCACCGAAGTGTCCAGCCATGTTTGAATCTACCCTTGTGTTCTGGGATGGGCGGGCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590635.5
ENST00000632905.1
CDS-3UTR CAA 90 bp CAGGCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTCCTGCTTAAATTCACAGTTATCAGATaGGGGGCAAACTTCCAGACA +
Preference number: 5 (lower is better)
Translates to: QACLCWARSSCTHTVLLKFTVIR*GANFQT
Trigger: TGTCTGGAAGTTTGCCCCCAATCTGATAACTGTGAA...TTTAAGCAGGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
CDS-3UTR CAA 90 bp GCATGTCTGTGCTGGGCTCGGAGCTCGTGCACGCACACTGTCCTGCTTAAACTCTCTTGTGGCCTCTCTTaGTCCATACTCTCTAAATCC +
Preference number: 5 (lower is better)
Translates to: ACLCWARSSCTHTVLLKLSCGLS*SILSKS
Trigger: GGATTTAGAGAGTATGGACAAAGAGAGGCCACAAGA...GAGTTTAAGCAGGACAGTGTGCGTGCACGAGCTCCGAGCCCAGCACAGACATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591598.5
CDS TCA 90 bp GCCAAAGCAAAGAAATCTGGGCTGGTGAGCAGAGTCAATGACGGTTaGAGGCAGTTCCTCTTCCCTGATGTCTTCACCTTCCAGCCTCCA +
Preference number: 5 (lower is better)
Translates to: AKAKKSGLVSRVNDG*RQFLFPDVFTFQPP
Trigger: TGGAGGCTGGAAGGTGAAGACATCAGGGAAGAGGAACTGCCTTCAACCGTCATTGACTCTGCTCACCAGCCCAGATTTCTTTGCTTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587623.1
ENST00000632255.1
CDS GCA 90 bp TTATTCAGCAATGTTTTTCTGCTTCTCTGTGGCACTCTCACACCCTaGGCTGGTGAATGCAGATGCCCTTCCTGTGGACACGCTAAAGGC +
Preference number: 5 (lower is better)
Translates to: LFSNVFLLLCGTLTP*AGECRCPSCGHAKG
Trigger: GCCTTTAGCGTGTCCACAGGAAGGGCATCTGCATTCACCAGCGCAGGGTGTGAGAGTGCCACAGAGAAGCAGAAAAACATTGCTGAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587623.1
ENST00000632255.1
CDS GCA 90 bp ATCCCAGAACACAAGGGTAGATTCAAACATGGCTGGACACTTCGGTaGTACGGAAACATATCCCCTTCTGGGGTCAGAGCACAGCTACTG +
Preference number: 5 (lower is better)
Translates to: IPEHKGRFKHGWTLR*YGNISPSGVRAQLL
Trigger: CAGTAGCTGTGCTCTGACCCCAGAAGGGGATATGTTTCCGTAGCACCGAAGTGTCCAGCCATGTTTGAATCTACCCTTGTGTTCTGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590635.5
ENST00000632905.1
CDS GCA 90 bp GCTGACACTAACGACGCTGTCAGGGCCACGAGTCTGGCCTCCGGTTaGTACAGCAACAAGCTTTTGGCAATTAACAAATTCATCAGTCAT +
Preference number: 5 (lower is better)
Translates to: ADTNDAVRATSLASG*YSNKLLAINKFISH
Trigger: ATGACTGATGAATTTGTTAATTGCCAAAAGCTTGTTGCTGTAGCAACCGGAGGCCAGACTCGTGGCCCTGACAGCGTCGTTAGTGTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585951.1
CDS CCA 90 bp CTTGAAATTTTCAAGATCAATGAGATTCACAGCAAGACTCCTGAGTaGCAGGGCTTTCAGGGAGGCGTCCCAGTCCTTCCCATCCTGGAA +
Preference number: 5 (lower is better)
Translates to: LEIFKINEIHSKTPE*QGFQGGVPVLPILE
Trigger: TTCCAGGATGGGAAGGACTGGGACGCCTCCCTGAAAGCCCTGCCACTCAGGAGTCTTGCTGTGAATCTCATTGATCTTGAAAATTTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS TCA 90 bp TGTCTAGGCCAAAGCAGCCCTTTCTGTACAATCAGAGGAACAGAATaGAACCTCAGTAGGGATCTTCCATCCTGGGGTTTTCAGAGCCAG +
Preference number: 5 (lower is better)
Translates to: CLGQSSPFCTIRGTE*NLSRDLPSWGFQSQ
Trigger: CTGGCTCTGAAAACCCCAGGATGGAAGATCCCTACTGAGGTTTCATTCTGTTCCTCTGATTGTACAGAAAGGGCTGCTTTGGCCTAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590635.5
ENST00000632905.1
CDS CCA 90 bp TTGAAACTCAACCAATCCTTAACAAAGCCCCGGGCAAAAGACGCTTaGAAATCCACAGAGCAAACCCAGTCGGTTCGCAGGCAAAGATTG +
Preference number: 5 (lower is better)
Translates to: LKLNQSLTKPRAKDA*KSTEQTQSVRRQRL
Trigger: CAATCTTTGCCTGCGAACCGACTGGGTTTGCTCTGTGGATTTCCAAGCGTCTTTTGCCCGGGGCTTTGTTAAGGATTGGTTGAGTTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS TCA 90 bp CTCATCGCCACGTGTCCAGCTAGTCACAGCACATGTGCCCTGGCCTaGATCATTAAAAGGCAGAAACATTTTAACCAATGGTTAATTAGC +
Preference number: 5 (lower is better)
Translates to: LIATCPASHSTCALA*IIKRQKHFNQWLIS
Trigger: GCTAATTAACCATTGGTTAAAATGTTTCTGCCTTTTAATGATTCAGGCCAGGGCACATGTGCTGTGACTAGCTGGACACGTGGCGATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS CCA 90 bp TGTTCCCAGGGACGCTGGCATGGAATGGTATTTAATAAGAGCATCTaGTTACTCGACAAGGTTACTAATATTCACACTTCACCAGAATGC +
Preference number: 5 (lower is better)
Translates to: CSQGRWHGMVFNKSI*LLDKVTNIHTSPEC
Trigger: GCATTCTGGTGAAGTGTGAATATTAGTAACCTTGTCGAGTAACCAGATGCTCTTATTAAATACCATTCCATGCCAGCGTCCCTGGGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS TCA 90 bp GACAAGGTTACTAATATTCACACTTCACCAGAATGCTTACATCACTaGATTTACTGTTTCGATGGCAAATCTCCTACGGGAATAATTCTA +
Preference number: 5 (lower is better)
Translates to: DKVTNIHTSPECLHH*IYCFDGKSPTGIIL
Trigger: TAGAATTATTCCCGTAGGAGATTTGCCATCGAAACAGTAAATTCAGTGATGTAAGCATTCTGGTGAAGTGTGAATATTAGTAACCTTGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS GCA 72 bp GCGGACAGAGGGCGGGCGGGCGGTCGGTACGGGGCCTaGGCTGCGCTCAGAGCGCAGCGCCTACCGCGGCGA +
Preference number: 6 (lower is better)
Translates to: ADRGRAGGRYGA*AALRAQRLPRR
Trigger: TCGCCGCGGTAGGCGCTGCGCTCTGAGCGCAGCGCAGGCCCCGTACCGACCGCCCGCCCGCCCTCTGTCCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000613122.5
ENST00000632301.1
ENST00000632932.1
CDS GCA 72 bp ACCAGAACCGCTCCTGGGGCGACCACCTGGCCCGGCTaGGCGCACAGCTCCCGCACCACGCCCGCGCGCTCC +
Preference number: 6 (lower is better)
Translates to: TRTAPGATTWPG*AHSSRTTPARS
Trigger: GGAGCGCGCGGGCGTGGTGCGGGAGCTGTGCGCGCAGCCGGGCCAGGTGGTCGCCCCAGGAGCGGTTCTGGT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS GCA 72 bp CCGGCCCCCTGCCGCGCTCCTCTCGCTGGACGCAGGTaGCCCGAGCGTCCGCTCCCTGCGGGTCCCTGGCTT +
Preference number: 6 (lower is better)
Translates to: PAPCRAPLAGRR*PERPLPAGPWL
Trigger: AAGCCAGGGACCCGCAGGGAGCGGACGCTCGGGGCACCTGCGTCCAGCGAGAGGAGCGCGGCAGGGGGCCGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000585951.1
ENST00000590599.2
ENST00000613122.5
CDS GCA 72 bp CAGAGGGCGGGCGGGCGGTCGGTACGGGGCCTGCGCTaGGCTCAGAGCGCAGCGCCTACCGCGGCGACACAA +
Preference number: 6 (lower is better)
Translates to: QRAGGRSVRGLR*AQSAAPTAATQ
Trigger: TTGTGTCGCCGCGGTAGGCGCTGCGCTCTGAGCGCAGCGCAGGCCCCGTACCGACCGCCCGCCCGCCCTCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000075430.11
ENST00000613122.5
ENST00000632301.1
ENST00000632932.1
CDS GCA 72 bp TGGGCAGGCCGCTGTCCCGGTGCCACCCGGCCACCCTaGGCACAGGATCCCTGGGGCTCAGGAGCGCCTGCC +
Preference number: 6 (lower is better)
Translates to: WAGRCPGATRPP*AQDPWGSGAPA
Trigger: GGCAGGCGCTCCTGAGCCCCAGGGATCCTGTGCGCAGGGTGGCCGGGTGGCACCGGGACAGCGGCCTGCCCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS GCA 72 bp CGCGCCAGGCTCGGCCTCTCCGGGGAGACTCGGTGCTaGAGGCCGCCCCGGCTCCAGGGAACTGCCCTGTGC +
Preference number: 6 (lower is better)
Translates to: RARLGLSGETRC*RPPRLQGTALC
Trigger: GCACAGGGCAGTTCCCTGGAGCCGGGGCGGCCTGCAGCACCGAGTCTCCCCGGAGAGGCCGAGCCTGGCGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000075430.11
ENST00000299543.9
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS GCA 72 bp TCCTGCCCACCCAGCTCAGGCTCCTTGTCCGGGGCATaGGCGCCAGGCTCGGCCTCTCCGGGGAGACTCGGT +
Preference number: 6 (lower is better)
Translates to: SCPPSSGSLSGA*APGSASPGRLG
Trigger: ACCGAGTCTCCCCGGAGAGGCCGAGCCTGGCGCGCATGCCCCGGACAAGGAGCCTGAGCTGGGTGGGCAGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000075430.11
ENST00000299543.9
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS CCA 72 bp CCTTCTCTGTGCCAGCTCGCGCGGCGATCAGGTGCGTaGCCCTGTCAGGGGCGTCGGGGCTCAGCACCAGCC +
Preference number: 6 (lower is better)
Translates to: PSLCQLARRSGA*PCQGRRGSAPA
Trigger: GGCTGGTGCTGAGCCCCGACGCCCCTGACAGGGCCACGCACCTGATCGCCGCGCGAGCTGGCACAGAGAAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000075430.11
ENST00000299543.9
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS GCA 72 bp AGCACCTTCTCTGTGCCAGCTCGCGCGGCGATCAGGTaGGTGGCCCTGTCAGGGGCGTCGGGGCTCAGCACC +
Preference number: 6 (lower is better)
Translates to: STFSVPARAAIR*VALSGASGLST
Trigger: GGTGCTGAGCCCCGACGCCCCTGACAGGGCCACGCACCTGATCGCCGCGCGAGCTGGCACAGAGAAGGTGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000075430.11
ENST00000299543.9
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS CCA 72 bp ACGTTGAGGGCGTCTGTGTGCGACGGCACAGCCCCGTaGTCCCTGAGACAGGCAGGTGAGGCGGGGCGGCCT +
Preference number: 6 (lower is better)
Translates to: TLRASVCDGTAP*SLRQAGEAGRP
Trigger: AGGCCGCCCCGCCTCACCTGCCTGTCTCAGGGACCACGGGGCTGTGCCGTCGCACACAGACGCCCTCAACGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS CCA 72 bp AGCAGGCGGGAGGTGGGTACCGTCAGTGCCTCGATGTaGCGGCGGGAGAGGCTGAGCCCAGTGCCGGGAGGT +
Preference number: 6 (lower is better)
Translates to: SRREVGTVSASM*RRERLSPVPGG
Trigger: ACCTCCCGGCACTGGGCTCAGCCTCTCCCGCCGCCACATCGAGGCACTGACGGTACCCACCTCCCGCCTGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS CAA 90 bp GGGCTCCCATCCCAAGAGCACGGCCCCGCTCACAGCTCTCCGACGTaGAGGGCGTCTGTGTGCGACGGCACAGCCCCGTGGTCCCTGAGA +
Preference number: 6 (lower is better)
Translates to: GLPSQEHGPAHSSPT*RASVCDGTAPWSLR
Trigger: TCTCAGGGACCACGGGGCTGTGCCGTCGCACACAGACGCCCTCAACGTCGGAGAGCTGTGAGCGGGGCCGTGCTCTTGGGATGGGAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS GCA 72 bp CCCGAACCTCAGCAGGCGGGAGGTGGGTACCGTCAGTaGCTCGATGTGGCGGCGGGAGAGGCTGAGCCCAGT +
Preference number: 6 (lower is better)
Translates to: PEPQQAGGGYRQ*LDVAAGEAEPS
Trigger: ACTGGGCTCAGCCTCTCCCGCCGCCACATCGAGGCACTGACGGTACCCACCTCCCGCCTGCTGAGGTTCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS CCA 72 bp GATAAGTCAAAGTCCAGGTCAGTGCCCGTGGCACCCTaGGCAGGCCGCTGTCCCGGTGCCACCCGGCCACCC +
Preference number: 6 (lower is better)
Translates to: DKSKSRSVPVAP*AGRCPGATRPP
Trigger: GGGTGGCCGGGTGGCACCGGGACAGCGGCCTGCCCAGGGTGCCACGGGCACTGACCTGGACTTTGACTTATC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS CCA 72 bp CCTTGGGAAGAACCGGCATCGGGTGGAACAAGGCGGTaGGGGGCACACCCTCCCGGTCGGGAAAGGCCGCAG +
Preference number: 6 (lower is better)
Translates to: PWEEPASGGTRR*GAHPPGRERPQ
Trigger: CTGCGGCCTTTCCCGACCGGGAGGGTGTGCCCCCCACCGCCTTGTTCCACCCGATGCCGGTTCTTCCCAAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000075430.11
ENST00000299543.9
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS CAA 72 bp TCCCAAGAGCACGGCCCCGCTCACAGCTCTCCGACGTaGAGGGCGTCTGTGTGCGACGGCACAGCCCCGTGG +
Preference number: 6 (lower is better)
Translates to: SQEHGPAHSSPT*RASVCDGTAPW
Trigger: CCACGGGGCTGTGCCGTCGCACACAGACGCCCTCAACGTCGGAGAGCTGTGAGCGGGGCCGTGCTCTTGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS GCA 72 bp CCCGCTCACAGCTCTCCGACGTTGAGGGCGTCTGTGTaGGACGGCACAGCCCCGTGGTCCCTGAGACAGGCA +
Preference number: 6 (lower is better)
Translates to: PAHSSPTLRASV*DGTAPWSLRQA
Trigger: TGCCTGTCTCAGGGACCACGGGGCTGTGCCGTCGCACACAGACGCCCTCAACGTCGGAGAGCTGTGAGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS TCA 72 bp CTCACCCGCAGTGACCCCCGACAGCTCGCTGTTCTGTaGCTCGGTCTCCGCCTCCTTCCTGTCGGCACAGCC +
Preference number: 6 (lower is better)
Translates to: LTRSDPRQLAVL*LGLRLLPVGTA
Trigger: GGCTGTGCCGACAGGAAGGAGGCGGAGACCGAGTCACAGAACAGCGAGCTGTCGGGGGTCACTGCGGGTGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000075430.11
ENST00000299543.9
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS TCA 72 bp CCCAGCGCTCCAGGCAGCTCCACAGCCAGTCAGGGTTaGCCACGTGCAGGTGTCCGCACTCCTGTGCCTGCA +
Preference number: 6 (lower is better)
Translates to: PSAPGSSTASQG*PRAGVRTPVPA
Trigger: TGCAGGCACAGGAGTGCGGACACCTGCACGTGGTCAACCCTGACTGGCTGTGGAGCTGCCTGGAGCGCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000075430.11
ENST00000299543.9
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS GCA 72 bp GCTTGCTCGGAGCTCACCATCAACTCCGGCACGCTGTaGACCATGGACACGGTCGCCGTGGACAGCGGCACC +
Preference number: 6 (lower is better)
Translates to: ACSELTINSGTL*TMDTVAVDSGT
Trigger: GGTGCCGCTGTCCACGGCGACCGTGTCCATGGTGCACAGCGTGCCGGAGTTGATGGTGAGCTCCGAGCAAGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000075430.11
ENST00000590635.5
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632905.1
ENST00000632932.1
CDS GCA 72 bp TGCCGTTCAGCTCCCGTGCAGGCTTCTCCAGGCCATTaGTGGGCTCCACTCCAGGGGCCTGCGTTACCCCCT +
Preference number: 6 (lower is better)
Translates to: CRSAPVQASPGH*WAPLQGPALPP
Trigger: AGGGGGTAACGCAGGCCCCTGGAGTGGAGCCCAGCAATGGCCTGGAGAAGCCTGCACGGGAGCTGAACGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS GCA 72 bp GGGTTGACCACGTGCAGGTGTCCGCACTCCTGTGCCTaGAGCACCTTCTCTGTGCCAGCTCGCGCGGCGATC +
Preference number: 6 (lower is better)
Translates to: GLTTCRCPHSCA*STFSVPARAAI
Trigger: GATCGCCGCGCGAGCTGGCACAGAGAAGGTGCTGCAGGCACAGGAGTGCGGACACCTGCACGTGGTCAACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000075430.11
ENST00000299543.9
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS GCA 72 bp GTCAGGGTTGACCACGTGCAGGTGTCCGCACTCCTGTaGCTGCAGCACCTTCTCTGTGCCAGCTCGCGCGGC +
Preference number: 6 (lower is better)
Translates to: VRVDHVQVSALL*LQHLLCASSRG
Trigger: GCCGCGCGAGCTGGCACAGAGAAGGTGCTGCAGGCACAGGAGTGCGGACACCTGCACGTGGTCAACCCTGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000075430.11
ENST00000299543.9
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS CCA 72 bp CGGAGCTCACCATCAACTCCGGCACGCTGTGCACCATaGACACGGTCGCCGTGGACAGCGGCACCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: RSSPSTPARCAP*TRSPWTAAPAA
Trigger: AGCAGCAGGTGCCGCTGTCCACGGCGACCGTGTCCATGGTGCACAGCGTGCCGGAGTTGATGGTGAGCTCCG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000075430.11
ENST00000590635.5
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632905.1
ENST00000632932.1
CDS CCA 72 bp TGTCGCTGGATAAGTCAAAGTCCAGGTCAGTGCCCGTaGCACCCTGGGCAGGCCGCTGTCCCGGTGCCACCC +
Preference number: 6 (lower is better)
Translates to: CRWISQSPGQCP*HPGQAAVPVPP
Trigger: GGGTGGCACCGGGACAGCGGCCTGCCCAGGGTGCCACGGGCACTGACCTGGACTTTGACTTATCCAGCGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS CCA 72 bp AAACCTCAGCCTCCCCGAACCTCAGCAGGCGGGAGGTaGGTACCGTCAGTGCCTCGATGTGGCGGCGGGAGA +
Preference number: 6 (lower is better)
Translates to: KPQPPRTSAGGR*VPSVPRCGGGR
Trigger: TCTCCCGCCGCCACATCGAGGCACTGACGGTACCCACCTCCCGCCTGCTGAGGTTCGGGGAGGCTGAGGTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS CAA 72 bp TCCCAGCGCTCCAGGCAGCTCCACAGCCAGTCAGGGTaGACCACGTGCAGGTGTCCGCACTCCTGTGCCTGC +
Preference number: 6 (lower is better)
Translates to: SQRSRQLHSQSG*TTCRCPHSCAC
Trigger: GCAGGCACAGGAGTGCGGACACCTGCACGTGGTCAACCCTGACTGGCTGTGGAGCTGCCTGGAGCGCTGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000075430.11
ENST00000299543.9
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS GCA 72 bp TCTCGCTGTCGCTGGATAAGTCAAAGTCCAGGTCAGTaGCCGTGGCACCCTGGGCAGGCCGCTGTCCCGGTG +
Preference number: 6 (lower is better)
Translates to: SRCRWISQSPGQ*PWHPGQAAVPV
Trigger: CACCGGGACAGCGGCCTGCCCAGGGTGCCACGGGCACTGACCTGGACTTTGACTTATCCAGCGACAGCGAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS GCA 72 bp CGCTTTCGCCATCAGAGGCGGAGGAGGAGGACTTCGTaGCCTCGGACTCACTGCTGCTCTCGCTGTCGCTGG +
Preference number: 6 (lower is better)
Translates to: RFRHQRRRRRTS*PRTHCCSRCRW
Trigger: CCAGCGACAGCGAGAGCAGCAGTGAGTCCGAGGGCACGAAGTCCTCCTCCTCCGCCTCTGATGGCGAAAGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS CCA 72 bp TCATCCGTGTCCTCCTCCTCCTCCTCCTCCATGCTCTaGTCCAGGGACTCACCCGCAGTGACCCCCGACAGC +
Preference number: 6 (lower is better)
Translates to: SSVSSSSSSSML*SRDSPAVTPDS
Trigger: GCTGTCGGGGGTCACTGCGGGTGAGTCCCTGGACCAGAGCATGGAGGAGGAGGAGGAGGAGGACACGGATGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000075430.11
ENST00000299543.9
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS CCA 72 bp AGTCGTAGATCCGAACCTCGGGGCCAGGCTGGGCCTTaGGAAGAACCGGCATCGGGTGGAACAAGGCGGTGG +
Preference number: 6 (lower is better)
Translates to: SRRSEPRGQAGP*EEPASGGTRRW
Trigger: CCACCGCCTTGTTCCACCCGATGCCGGTTCTTCCCAAGGCCCAGCCTGGCCCCGAGGTTCGGATCTACGACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000075430.11
ENST00000299543.9
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS CAA 90 bp TCCACCTTGTCCCAGCGCTCCAGGCAGCTCCACAGCCAGTCAGGGTaGACCACGTGCAGGTGTCCGCACTCCTGTGCCTGCAGCACCTTC +
Preference number: 6 (lower is better)
Translates to: STLSQRSRQLHSQSG*TTCRCPHSCACSTF
Trigger: GAAGGTGCTGCAGGCACAGGAGTGCGGACACCTGCACGTGGTCAACCCTGACTGGCTGTGGAGCTGCCTGGAGCGCTGGGACAAGGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000075430.11
ENST00000299543.9
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS TCA 72 bp AAGGCCGCAGGGCTGTTCTCCCTCTGTGCCTTGGTGTaGTCGTCCCTGAGCGGGAAGAGCTGCTCCTCCACC +
Preference number: 6 (lower is better)
Translates to: KAAGLFSLCALV*SSLSGKSCSST
Trigger: GGTGGAGGAGCAGCTCTTCCCGCTCAGGGACGATCACACCAAGGCACAGAGGGAGAACAGCCCTGCGGCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000075430.11
ENST00000299543.9
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS GCA 72 bp CGGAGCTGCTGCCCTCATCCTCGTTGCTGGACTCCCTaGTGGACTCGCTGGCGGCGTCCTCTTCATTCAGCT +
Preference number: 6 (lower is better)
Translates to: RSCCPHPRCWTP*WTRWRRPLHSA
Trigger: AGCTGAATGAAGAGGACGCCGCCAGCGAGTCCAGCAGGGAGTCCAGCAACGAGGATGAGGGCAGCAGCTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000075430.11
ENST00000299543.9
ENST00000590599.2
ENST00000591598.5
ENST00000613122.5
CDS CCA 72 bp ACTCCGGCACGCTGTGCACCATGGACACGGTCGCCGTaGACAGCGGCACCTGCTGCTTCCCGTTCTTACTCT +
Preference number: 6 (lower is better)
Translates to: TPARCAPWTRSP*TAAPAASRSYS
Trigger: AGAGTAAGAACGGGAAGCAGCAGGTGCCGCTGTCCACGGCGACCGTGTCCATGGTGCACAGCGTGCCGGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000075430.11
ENST00000590635.5
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632905.1
ENST00000632932.1
CDS CCA 72 bp CAGCTTGGCGATCTTCTCCAGGAAGTCCTTGCAGTGTaGACGCAGGCGCGTGTGCAGCATGGGCTCACCCCG +
Preference number: 6 (lower is better)
Translates to: QLGDLLQEVLAV*TQARVQHGLTP
Trigger: CGGGGTGAGCCCATGCTGCACACGCGCCTGCGTCCACACTGCAAGGACTTCCTGGAGAAGATCGCCAAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS CCA 72 bp GTCAGGCAGCTCTTCACCAAACATCTGCGGCTGGGGTaGCGGAACCGCTCTGAAGGAAGAGGGCTCCTGGCG +
Preference number: 6 (lower is better)
Translates to: VRQLFTKHLRLG*RNRSEGRGLLA
Trigger: CGCCAGGAGCCCTCTTCCTTCAGAGCGGTTCCGCCACCCCAGCCGCAGATGTTTGGTGAAGAGCTGCCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591598.5
ENST00000613122.5
CDS CAA 90 bp AGGGAAGAGCACTTTATGTCCAGCATGGATCACGTCGGAGTGGTGTaGGCGGGCAGCTCTCCCGGGGGCTCCCATCCCAAGAGCACGGCC +
Preference number: 6 (lower is better)
Translates to: REEHFMSSMDHVGVV*AGSSPGGSHPKSTA
Trigger: GGCCGTGCTCTTGGGATGGGAGCCCCCGGGAGAGCTGCCCGCCAACACCACTCCGACGTGATCCATGCTGGACATAAAGTGCTCTTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS CAA 90 bp AAGACGTGCAGCTCGTACAGCTTGGCGATCTTCTCCAGGAAGTCCTaGCAGTGTGGACGCAGGCGCGTGTGCAGCATGGGCTCACCCCGG +
Preference number: 6 (lower is better)
Translates to: KTCSSYSLAIFSRKS*QCGRRRVCSMGSPR
Trigger: CCGGGGTGAGCCCATGCTGCACACGCGCCTGCGTCCACACTGCAAGGACTTCCTGGAGAAGATCGCCAAGCTGTACGAGCTGCACGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS CAA 90 bp GCGTACAGCCGGCTGCCGAAGGTGAAGACGTGCAGCTCGTACAGCTaGGCGATCTTCTCCAGGAAGTCCTTGCAGTGTGGACGCAGGCGC +
Preference number: 6 (lower is better)
Translates to: AYSRLPKVKTCSSYS*AIFSRKSLQCGRRR
Trigger: GCGCCTGCGTCCACACTGCAAGGACTTCCTGGAGAAGATCGCCAAGCTGTACGAGCTGCACGTCTTCACCTTCGGCAGCCGGCTGTACGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS TCA 72 bp ACGCGGACGGGAGTGGCAACAGAGGCGGCAGGCAAGTaGGCAGGTGATGGGAGTACCGCATCCAAACCTCAG +
Preference number: 6 (lower is better)
Translates to: TRTGVATEAAGK*AGDGSTASKPQ
Trigger: CTGAGGTTTGGATGCGGTACTCCCATCACCTGCTCACTTGCCTGCCGCCTCTGTTGCCACTCCCGTCCGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS GCA 72 bp TGCACCATGGACACGGTCGCCGTGGACAGCGGCACCTaGTGCTTCCCGTTCTTACTCTGCAACTGGGTGAGG +
Preference number: 6 (lower is better)
Translates to: CTMDTVAVDSGT*CFPFLLCNWVR
Trigger: CCTCACCCAGTTGCAGAGTAAGAACGGGAAGCAGCAGGTGCCGCTGTCCACGGCGACCGTGTCCATGGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000075430.11
ENST00000590635.5
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632905.1
ENST00000632932.1
CDS CAA 90 bp GTCGGGTGTAGCCCACTGAAAATTATGGCCACGTCTGCCAGCACCTaGCTCTTGAGCTCCGGCACGATCTTGCGGATGTCCGGCGCCTCC +
Preference number: 6 (lower is better)
Translates to: VGCSPLKIMATSAST*LLSSGTILRMSGAS
Trigger: GGAGGCGCCGGACATCCGCAAGATCGTGCCGGAGCTCAAGAGCAAGGTGCTGGCAGACGTGGCCATAATTTTCAGTGGGCTACACCCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000075430.11
ENST00000299543.9
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS CAA 90 bp CGCTCGCTAAGATGTCCACCCGCTCGCTCTGGGCACGCCTCCAATTaGGGAAACATGCAGAGAGGGCGACTCCTGAACACCTGGGGTGAG +
Preference number: 6 (lower is better)
Translates to: RSLRCPPARSGHASN*GNMQRGRLLNTWGE
Trigger: CTCACCCCAGGTGTTCAGGAGTCGCCCTCTCTGCATGTTTCCCAAATTGGAGGCGTGCCCAGAGCGAGCGGGTGGACATCTTAGCGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS GCA 72 bp GCTCGTACAGCTTGGCGATCTTCTCCAGGAAGTCCTTaGAGTGTGGACGCAGGCGCGTGTGCAGCATGGGCT +
Preference number: 6 (lower is better)
Translates to: ARTAWRSSPGSP*SVDAGACAAWA
Trigger: AGCCCATGCTGCACACGCGCCTGCGTCCACACTGCAAGGACTTCCTGGAGAAGATCGCCAAGCTGTACGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS CCA 72 bp TCGATCAGAAATCACAGCTCAGCCCCCGAGCCCACATaGAGGCCGACGCATCCACCCCGTCCACTCTGCAAT +
Preference number: 6 (lower is better)
Translates to: SIRNHSSAPEPT*RPTHPPRPLCN
Trigger: ATTGCAGAGTGGACGGGGTGGATGCGTCGGCCTCCATGTGGGCTCGGGGGCTGAGCTGTGATTTCTGATCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS CCA 72 bp AAGAGCACTTTATGTCCAGCATGGATCACGTCGGAGTaGTGTTGGCGGGCAGCTCTCCCGGGGGCTCCCATC +
Preference number: 6 (lower is better)
Translates to: KSTLCPAWITSE*CWRAALPGAPI
Trigger: GATGGGAGCCCCCGGGAGAGCTGCCCGCCAACACCACTCCGACGTGATCCATGCTGGACATAAAGTGCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS CAA 72 bp TCTGCCAGCACCTTGCTCTTGAGCTCCGGCACGATCTaGCGGATGTCCGGCGCCTCCTCGATCTCCTTGTTG +
Preference number: 6 (lower is better)
Translates to: SASTLLLSSGTI*RMSGASSISLL
Trigger: CAACAAGGAGATCGAGGAGGCGCCGGACATCCGCAAGATCGTGCCGGAGCTCAAGAGCAAGGTGCTGGCAGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000075430.11
ENST00000299543.9
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS TCA 72 bp CTGCGATGGTGTGTGCGTACAGCCGGCTGCCGAAGGTaGAGACGTGCAGCTCGTACAGCTTGGCGATCTTCT +
Preference number: 6 (lower is better)
Translates to: LRWCVRTAGCRR*RRAARTAWRSS
Trigger: AGAAGATCGCCAAGCTGTACGAGCTGCACGTCTTCACCTTCGGCAGCCGGCTGTACGCACACACCATCGCAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS TCA 72 bp AACTTACACCCAGGAGCGAGGGGCCCGCTCGGCCGATaGCTAGCGGAGGGAAGAGCACTTTATGTCCAGCAT +
Preference number: 6 (lower is better)
Translates to: NLHPGARGPLGR*LAEGRALYVQH
Trigger: ATGCTGGACATAAAGTGCTCTTCCCTCCGCTAGTCATCGGCCGAGCGGGCCCCTCGCTCCTGGGTGTAAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS GCA 72 bp CGGAGGAGGAGGACTTCGTGCCCTCGGACTCACTGCTaGTCTCGCTGTCGCTGGATAAGTCAAAGTCCAGGT +
Preference number: 6 (lower is better)
Translates to: RRRRTSCPRTHC*SRCRWISQSPG
Trigger: ACCTGGACTTTGACTTATCCAGCGACAGCGAGAGCAGCAGTGAGTCCGAGGGCACGAAGTCCTCCTCCTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS GCA 72 bp AGGCGGAGGAGGAGGACTTCGTGCCCTCGGACTCACTaGTGCTCTCGCTGTCGCTGGATAAGTCAAAGTCCA +
Preference number: 6 (lower is better)
Translates to: RRRRRTSCPRTH*CSRCRWISQSP
Trigger: TGGACTTTGACTTATCCAGCGACAGCGAGAGCAGCAGTGAGTCCGAGGGCACGAAGTCCTCCTCCTCCGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS CCA 72 bp ACAGGGACGCTCGCTAAGATGTCCACCCGCTCGCTCTaGGCACGCCTCCAATTTGGGAAACATGCAGAGAGG +
Preference number: 6 (lower is better)
Translates to: TGTLAKMSTRSL*ARLQFGKHAER
Trigger: CCTCTCTGCATGTTTCCCAAATTGGAGGCGTGCCCAGAGCGAGCGGGTGGACATCTTAGCGAGCGTCCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS CAA 72 bp CTGAAAATTATGGCCACGTCTGCCAGCACCTTGCTCTaGAGCTCCGGCACGATCTTGCGGATGTCCGGCGCC +
Preference number: 6 (lower is better)
Translates to: LKIMATSASTLL*SSGTILRMSGA
Trigger: GGCGCCGGACATCCGCAAGATCGTGCCGGAGCTCAAGAGCAAGGTGCTGGCAGACGTGGCCATAATTTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000075430.11
ENST00000299543.9
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS CAA 72 bp AGATGTCCACCCGCTCGCTCTGGGCACGCCTCCAATTaGGGAAACATGCAGAGAGGGCGACTCCTGAACACC +
Preference number: 6 (lower is better)
Translates to: RCPPARSGHASN*GNMQRGRLLNT
Trigger: GGTGTTCAGGAGTCGCCCTCTCTGCATGTTTCCCAAATTGGAGGCGTGCCCAGAGCGAGCGGGTGGACATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS CAA 90 bp TGTAGCCCACTGAAAATTATGGCCACGTCTGCCAGCACCTTGCTCTaGAGCTCCGGCACGATCTTGCGGATGTCCGGCGCCTCCTCGATC +
Preference number: 6 (lower is better)
Translates to: CSPLKIMATSASTLL*SSGTILRMSGASSI
Trigger: GATCGAGGAGGCGCCGGACATCCGCAAGATCGTGCCGGAGCTCAAGAGCAAGGTGCTGGCAGACGTGGCCATAATTTTCAGTGGGCTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000075430.11
ENST00000299543.9
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS TCA 72 bp AGTCGAGGCCGAGTCCAGAGTCACAGAGACTCGGTGTaGAGCCGCTTCGATCAGAAATCACAGCTCAGCCCC +
Preference number: 6 (lower is better)
Translates to: SRGRVQSHRDSV*SRFDQKSQLSP
Trigger: GGGGCTGAGCTGTGATTTCTGATCGAAGCGGCTTCACACCGAGTCTCTGTGACTCTGGACTCGGCCTCGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS GCA 72 bp CCCACATGGAGGCCGACGCATCCACCCCGTCCACTCTaGAATTTCAAACTCATCGCCACGTGTCCAGCTAGT +
Preference number: 6 (lower is better)
Translates to: PTWRPTHPPRPL*NFKLIATCPAS
Trigger: ACTAGCTGGACACGTGGCGATGAGTTTGAAATTGCAGAGTGGACGGGGTGGATGCGTCGGCCTCCATGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS GCA 72 bp GGGGTTTTCAGAGCCAGGCGCACACGCGTGTCCACTTaGCCGCCCATCCCAGAACACAAGGGTAGATTCAAA +
Preference number: 6 (lower is better)
Translates to: GVFRARRTRVST*PPIPEHKGRFK
Trigger: TTTGAATCTACCCTTGTGTTCTGGGATGGGCGGGCAAGTGGACACGCGTGTGCGCCTGGCTCTGAAAACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000590635.5
ENST00000632905.1
CDS CAA 72 bp CGGCTGCCGAAGGTGAAGACGTGCAGCTCGTACAGCTaGGCGATCTTCTCCAGGAAGTCCTTGCAGTGTGGA +
Preference number: 6 (lower is better)
Translates to: RLPKVKTCSSYS*AIFSRKSLQCG
Trigger: TCCACACTGCAAGGACTTCCTGGAGAAGATCGCCAAGCTGTACGAGCTGCACGTCTTCACCTTCGGCAGCCG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS TCA 72 bp CTGTCGTCGCTGCCTTCTCCAAGGATGTCGTCCACCTaGCAAACAGCCAAGAGTCAGCGACAGACCTCCTTC +
Preference number: 6 (lower is better)
Translates to: LSSLPSPRMSST*QTAKSQRQTSF
Trigger: GAAGGAGGTCTGTCGCTGACTCTTGGCTGTTTGTCAGGTGGACGACATCCTTGGAGAAGGCAGCGACGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS GCA 72 bp CTTCTCTGTGGCACTCTCACACCCTGCGCTGGTGAATaGAGATGCCCTTCCTGTGGACACGCTAAAGGCACA +
Preference number: 6 (lower is better)
Translates to: LLCGTLTPCAGE*RCPSCGHAKGT
Trigger: TGTGCCTTTAGCGTGTCCACAGGAAGGGCATCTGCATTCACCAGCGCAGGGTGTGAGAGTGCCACAGAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587623.1
ENST00000632255.1
CDS CCA 72 bp CCACATTCAGCACACAGGCCTTTCATGACAACCGGGTaGCTGCATCCTTCCAACCTCACCAGAACCGCTCCT +
Preference number: 6 (lower is better)
Translates to: PHSAHRPFMTTG*LHPSNLTRTAP
Trigger: AGGAGCGGTTCTGGTGAGGTTGGAAGGATGCAGCCACCCGGTTGTCATGAAAGGCCTGTGTGCTGAATGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS CCA 72 bp ATGACTAGCGGAGGGAAGAGCACTTTATGTCCAGCATaGATCACGTCGGAGTGGTGTTGGCGGGCAGCTCTC +
Preference number: 6 (lower is better)
Translates to: MTSGGKSTLCPA*ITSEWCWRAAL
Trigger: GAGAGCTGCCCGCCAACACCACTCCGACGTGATCCATGCTGGACATAAAGTGCTCTTCCCTCCGCTAGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS CCA 72 bp CCACATTCAGCACACAGGCCTTTCATGACAACCGGGTaGCTGCATCCTTCCAACCTCACCAGAACCGCTCTG +
Preference number: 6 (lower is better)
Translates to: PHSAHRPFMTTG*LHPSNLTRTAL
Trigger: CAGAGCGGTTCTGGTGAGGTTGGAAGGATGCAGCCACCCGGTTGTCATGAAAGGCCTGTGTGCTGAATGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590635.5
ENST00000632905.1
CDS CAA 72 bp AGCCCACTGAAAATTATGGCCACGTCTGCCAGCACCTaGCTCTTGAGCTCCGGCACGATCTTGCGGATGTCC +
Preference number: 6 (lower is better)
Translates to: SPLKIMATSAST*LLSSGTILRMS
Trigger: GGACATCCGCAAGATCGTGCCGGAGCTCAAGAGCAAGGTGCTGGCAGACGTGGCCATAATTTTCAGTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000075430.11
ENST00000299543.9
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS GCA 72 bp GCACACGGCCTCCGCCTGTTAGTTCTCACCAGTCACTaGAGGCTCCCAGATCATTTTAGGTACCTTCCCCTT +
Preference number: 6 (lower is better)
Translates to: AHGLRLLVLTSH*RLPDHFRYLPL
Trigger: AAGGGGAAGGTACCTAAAATGATCTGGGAGCCTGCAGTGACTGGTGAGAACTAACAGGCGGAGGCCGTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587623.1
ENST00000632255.1
CDS TCA 72 bp TCTTGCGGATGTCCGGCGCCTCCTCGATCTCCTTGTTaGGGTAGCGGTCATACTTGGCATAGTAGTCAGTGT +
Preference number: 6 (lower is better)
Translates to: SCGCPAPPRSPC*GSGHTWHSSQC
Trigger: ACACTGACTACTATGCCAAGTATGACCGCTACCTCAACAAGGAGATCGAGGAGGCGCCGGACATCCGCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000075430.11
ENST00000299543.9
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS TCA 72 bp AATTCATCAGTCATCTCTTTTCCTCCGCATACACGCTaGCGGCTGTTCCGGGAAAACCCGGCTCCCATCCTC +
Preference number: 6 (lower is better)
Translates to: NSSVISFPPHTR*RLFRENPAPIL
Trigger: GAGGATGGGAGCCGGGTTTTCCCGGAACAGCCGTCAGCGTGTATGCGGAGGAAAAGAGATGACTGATGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585951.1
CDS GCA 72 bp GGAGGTGAACTCAAGTTCTCCCCTCCTCTCCTGAACTaGACGGAGATGGGAGAAGGACGCACAGAAAGAACT +
Preference number: 6 (lower is better)
Translates to: GGELKFSPPLLN*TEMGEGRTERT
Trigger: AGTTCTTTCTGTGCGTCCTTCTCCCATCTCCGTGCAGTTCAGGAGAGGAGGGGAGAACTTGAGTTCACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS CCA 72 bp GGGCTGGAGGTAGCACTCTGCTTTCTACCTGAGCCCTaGGGCTTGAAACTCAACCAATCCTTAACAAAGCCC +
Preference number: 6 (lower is better)
Translates to: GLEVALCFLPEP*GLKLNQSLTKP
Trigger: GGGCTTTGTTAAGGATTGGTTGAGTTTCAAGCCCCAGGGCTCAGGTAGAAAGCAGAGTGCTACCTCCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS GCA 72 bp GGTCTCTCACGGGCGGAGATGGCTCTGAGACCTCAGTaGCTCGAGAATGATTTACTTTCTTTCTCGTCTGAG +
Preference number: 6 (lower is better)
Translates to: GLSRAEMALRPQ*LENDLLSFSSE
Trigger: CTCAGACGAGAAAGAAAGTAAATCATTCTCGAGGCACTGAGGTCTCAGAGCCATCTCCGCCCGTGAGAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS GCA 72 bp AATGTTTTTCTGCTTCTCTGTGGCACTCTCACACCCTaGGCTGGTGAATGCAGATGCCCTTCCTGTGGACAC +
Preference number: 6 (lower is better)
Translates to: NVFLLLCGTLTP*AGECRCPSCGH
Trigger: GTGTCCACAGGAAGGGCATCTGCATTCACCAGCGCAGGGTGTGAGAGTGCCACAGAGAAGCAGAAAAACATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587623.1
ENST00000632255.1
CDS CCA 72 bp TGCTTCCCGTTCTTACTCTGCAACTGGGTGAGGTCTTaGCCACATTCAGCACACAGGCCTTTCATGACAACC +
Preference number: 6 (lower is better)
Translates to: CFPFLLCNWVRS*PHSAHRPFMTT
Trigger: GGTTGTCATGAAAGGCCTGTGTGCTGAATGTGGCCAAGACCTCACCCAGTTGCAGAGTAAGAACGGGAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000075430.11
ENST00000590635.5
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632905.1
ENST00000632932.1
CDS CCA 72 bp AACCAATCCTTAACAAAGCCCCGGGCAAAAGACGCTTaGAAATCCACAGAGCAAACCCAGTCGGTTCGCAGG +
Preference number: 6 (lower is better)
Translates to: NQSLTKPRAKDA*KSTEQTQSVRR
Trigger: CCTGCGAACCGACTGGGTTTGCTCTGTGGATTTCCAAGCGTCTTTTGCCCGGGGCTTTGTTAAGGATTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS TCA 72 bp TCTTCTCTATCGGGAAGTTTGTCGGGTGTAGCCCACTaGAAATTATGGCCACGTCTGCCAGCACCTTGCTCT +
Preference number: 6 (lower is better)
Translates to: SSLSGSLSGVAH*KLWPRLPAPCS
Trigger: AGAGCAAGGTGCTGGCAGACGTGGCCATAATTTTCAGTGGGCTACACCCGACAAACTTCCCGATAGAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000075430.11
ENST00000299543.9
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS GCA 72 bp AACGACGCTGTCAGGGCCACGAGTCTGGCCTCCGGTTaGTACAGCAACAAGCTTTTGGCAATTAACAAATTC +
Preference number: 6 (lower is better)
Translates to: NDAVRATSLASG*YSNKLLAINKF
Trigger: GAATTTGTTAATTGCCAAAAGCTTGTTGCTGTAGCAACCGGAGGCCAGACTCGTGGCCCTGACAGCGTCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585951.1
CDS TCA 72 bp AAGAAATCTGGGCTGGTGAGCAGAGTCAATGACGGTTaGAGGCAGTTCCTCTTCCCTGATGTCTTCACCTTC +
Preference number: 6 (lower is better)
Translates to: KKSGLVSRVNDG*RQFLFPDVFTF
Trigger: GAAGGTGAAGACATCAGGGAAGAGGAACTGCCTTCAACCGTCATTGACTCTGCTCACCAGCCCAGATTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587623.1
ENST00000632255.1
CDS CCA 72 bp CCCATCCCAGAACACAAGGGTAGATTCAAACATGGCTaGACACTTCGGTGCTACGGAAACATATCCCCTTCT +
Preference number: 6 (lower is better)
Translates to: PIPEHKGRFKHG*TLRCYGNISPS
Trigger: AGAAGGGGATATGTTTCCGTAGCACCGAAGTGTCCAGCCATGTTTGAATCTACCCTTGTGTTCTGGGATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590635.5
ENST00000632905.1
CDS CAA 90 bp CTTGAAACTCAACCAATCCTTAACAAAGCCCCGGGCAAAAGACGCTaGGAAATCCACAGAGCAAACCCAGTCGGTTCGCAGGCAAAGATT +
Preference number: 6 (lower is better)
Translates to: LETQPILNKAPGKRR*EIHRANPVGSQAKI
Trigger: AATCTTTGCCTGCGAACCGACTGGGTTTGCTCTGTGGATTTCCAAGCGTCTTTTGCCCGGGGCTTTGTTAAGGATTGGTTGAGTTTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS CAA 90 bp GTCAGGGCCACGAGTCTGGCCTCCGGTTGCTACAGCAACAAGCTTTaGGCAATTAACAAATTCATCAGTCATCTCTTTTCCTCCGCATAC +
Preference number: 6 (lower is better)
Translates to: VRATSLASGCYSNKL*AINKFISHLFSSAY
Trigger: GTATGCGGAGGAAAAGAGATGACTGATGAATTTGTTAATTGCCAAAAGCTTGTTGCTGTAGCAACCGGAGGCCAGACTCGTGGCCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585951.1
CDS CCA 72 bp GGCTCCCAGATCATTTTAGGTACCTTCCCCTTTCTGTaGCGATTTAAATACCTCCCTGTGAGTGACTGGGAA +
Preference number: 6 (lower is better)
Translates to: GSQIILGTFPFL*RFKYLPVSDWE
Trigger: TTCCCAGTCACTCACAGGGAGGTATTTAAATCGCCACAGAAAGGGGAAGGTACCTAAAATGATCTGGGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587623.1
ENST00000632255.1
CDS CAA 90 bp GCTTGGAAATCCACAGAGCAAACCCAGTCGGTTCGCAGGCAAAGATaGGGTTTAAATTCCTTCTGTCCCTTATGTGAACAGGGACTTTAT +
Preference number: 6 (lower is better)
Translates to: AWKSTEQTQSVRRQR*GLNSFCPLCEQGLY
Trigger: ATAAAGTCCCTGTTCACATAAGGGACAGAAGGAATTTAAACCCAATCTTTGCCTGCGAACCGACTGGGTTTGCTCTGTGGATTTCCAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS TCA 72 bp CCTTCCCCTTTCTGTGGCGATTTAAATACCTCCCTGTaGGTGACTGGGAAAAAGCCAAAGCAAAGAAATCTG +
Preference number: 6 (lower is better)
Translates to: PSPFCGDLNTSL*VTGKKPKQRNL
Trigger: CAGATTTCTTTGCTTTGGCTTTTTCCCAGTCACTCACAGGGAGGTATTTAAATCGCCACAGAAAGGGGAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587623.1
ENST00000632255.1
CDS TCA 72 bp CAAAGCAGCCCTTTCTGTACAATCAGAGGAACAGAATaGAACCTCAGTAGGGATCTTCCATCCTGGGGTTTT +
Preference number: 6 (lower is better)
Translates to: QSSPFCTIRGTE*NLSRDLPSWGF
Trigger: AAAACCCCAGGATGGAAGATCCCTACTGAGGTTTCATTCTGTTCCTCTGATTGTACAGAAAGGGCTGCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590635.5
ENST00000632905.1
CDS CAA 90 bp TCACCCGTGCCCTGGAAGTATACATATTTCTTCACAGTTATCAGATaGGGGGCAAACTTCCAGACATCTTCTCGATCATCAATAATGCAA +
Preference number: 6 (lower is better)
Translates to: SPVPWKYTYFFTVIR*GANFQTSSRSSIMQ
Trigger: TTGCATTATTGATGATCGAGAAGATGTCTGGAAGTTTGCCCCCAATCTGATAACTGTGAAGAAATATGTATACTTCCAGGGCACGGGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000075430.11
ENST00000591598.5
ENST00000613122.5
ENST00000632301.1
ENST00000632450.1
ENST00000632932.1
CDS CCA 72 bp GGACGCTGGCATGGAATGGTATTTAATAAGAGCATCTaGTTACTCGACAAGGTTACTAATATTCACACTTCA +
Preference number: 6 (lower is better)
Translates to: GRWHGMVFNKSI*LLDKVTNIHTS
Trigger: TGAAGTGTGAATATTAGTAACCTTGTCGAGTAACCAGATGCTCTTATTAAATACCATTCCATGCCAGCGTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS TCA 72 bp ACTAATATTCACACTTCACCAGAATGCTTACATCACTaGATTTACTGTTTCGATGGCAAATCTCCTACGGGA +
Preference number: 6 (lower is better)
Translates to: TNIHTSPECLHH*IYCFDGKSPTG
Trigger: TCCCGTAGGAGATTTGCCATCGAAACAGTAAATTCAGTGATGTAAGCATTCTGGTGAAGTGTGAATATTAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590599.2
CDS CAA 90 bp CCTTCTGTCCCTTATGTGAACAGGGACTTTATTCCTGGTGCACTGTaGGATTTTATGGTGAATAATCAGAATATTTGCTTGAAATTTTCA +
Preference number: 6 (lower is better)
Translates to: PSVPYVNRDFIPGAL*DFMVNNQNICLKFS
Trigger: TGAAAATTTCAAGCAAATATTCTGATTATTCACCATAAAATCCAACAGTGCACCAGGAATAAAGTCCCTGTTCACATAAGGGACAGAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590599.2