RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CTBP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000159692

Ensembl transcript IDs: ENST00000290921.10, ENST00000382950.8, ENST00000382952.8, ENST00000503594.5, ENST00000504092.5, ENST00000504784.1, ENST00000505826.5, ENST00000506180.5, ENST00000510568.1, ENST00000510739.1, ENST00000511907.1, ENST00000513420.1, ENST00000514210.5, ENST00000514495.1, ENST00000514596.1, ENST00000514669.5, ENST00000515399.5

Found 578 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGCGTGCCCGTGATCCCACCTCGGCACAGCTGGGGAAGGCCCTCTaGTCTAGGAAGCGGGACCCGGGTCCTCGCAGGGTCGTCGCGGGG +
Preference number: 1 (lower is better)
Translates to: LRARDPTSAQLGKAL*SRKRDPGPRRVVAG
Trigger: CCCCGCGACGACCCTGCGAGGACCCGGGTCCCGCTTCCTAGAGCAGAGGGCCTTCCCCAGCTGTGCCGAGGTGGGATCACGGGCACGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504784.1
3UTR TCA 90 bp CCGCAGCGGGCGGCAAACTCCCCCACTGCTGGCCAGCGAGAGGCCTaGGTACAGGCAAGTGTCCGGCCTGGCAGAGGCGCCGTCTGGAGG +
Preference number: 1 (lower is better)
Translates to: PQRAANSPTAGQREA*VQASVRPGRGAVWR
Trigger: CCTCCAGACGGCGCCTCTGCCAGGCCGGACACTTGCCTGTACTCAGGCCTCTCGCTGGCCAGCAGTGGGGGAGTTTGCCGCCCGCTGCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510739.1
3UTR GCA 90 bp GCCCAAAGGCTGCTCACTGCTGGACCAAAGCCAGGCCGCGGGCAATaGCGAGACCGCCCGTGTGAAGACCGCCGCGCAACTGGGGCCGGG +
Preference number: 1 (lower is better)
Translates to: AQRLLTAGPKPGRGQ*RDRPCEDRRATGAG
Trigger: CCCGGCCCCAGTTGCGCGGCGGTCTTCACACGGGCGGTCTCGGCATTGCCCGCGGCCTGGCTTTGGTCCAGCAGTGAGCAGCCTTTGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR CCA 90 bp ATCAGCTCTTCGTCGGTGTCTGGCCCAGCCTCCTGGGGGCTGGGCTaGGGTGATCGGCTCGTGGGCAGCACGGGGAGCTCCTGCGGGTGG +
Preference number: 1 (lower is better)
Translates to: ISSSSVSGPASWGLG*GDRLVGSTGSSCGW
Trigger: CCACCCGCAGGAGCTCCCCGTGCTGCCCACGAGCCGATCACCCCAGCCCAGCCCCCAGGAGGCTGGGCCAGACACCGACGAAGAGCTGAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR CCA 90 bp GGGCCCTGGCTAAAGCCCGCAGCGGGCGGCAAACTCCCCCACTGCTaGCCAGCGAGAGGCCTGAGTACAGGCAAGTGTCCGGCCTGGCAG +
Preference number: 1 (lower is better)
Translates to: GPWLKPAAGGKLPHC*PARGLSTGKCPAWQ
Trigger: CTGCCAGGCCGGACACTTGCCTGTACTCAGGCCTCTCGCTGGCCAGCAGTGGGGGAGTTTGCCGCCCGCTGCGGGCTTTAGCCAGGGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510739.1
3UTR TCA 90 bp TGCTGGACCAAAGCCAGGCCGCGGGCAATGCCGAGACCGCCCGTGTaGAGACCGCCGCGCAACTGGGGCCGGGGGAAGCACCTTACTCCA +
Preference number: 1 (lower is better)
Translates to: CWTKARPRAMPRPPV*RPPRNWGRGKHLTP
Trigger: TGGAGTAAGGTGCTTCCCCCGGCCCCAGTTGCGCGGCGGTCTTCACACGGGCGGTCTCGGCATTGCCCGCGGCCTGGCTTTGGTCCAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR GCA 90 bp AGAGGGCCCTGGCTAAAGCCCGCAGCGGGCGGCAAACTCCCCCACTaGTGGCCAGCGAGAGGCCTGAGTACAGGCAAGTGTCCGGCCTGG +
Preference number: 1 (lower is better)
Translates to: RGPWLKPAAGGKLPH*WPARGLSTGKCPAW
Trigger: CCAGGCCGGACACTTGCCTGTACTCAGGCCTCTCGCTGGCCAGCAGTGGGGGAGTTTGCCGCCCGCTGCGGGCTTTAGCCAGGGCCCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510739.1
3UTR CCA 90 bp GCGGACACAGAAGGCTGCGTGCCCGTGATCCCACCTCGGCACAGCTaGGGAAGGCCCTCTGCTCTAGGAAGCGGGACCCGGGTCCTCGCA +
Preference number: 1 (lower is better)
Translates to: ADTEGCVPVIPPRHS*GRPSALGSGTRVLA
Trigger: TGCGAGGACCCGGGTCCCGCTTCCTAGAGCAGAGGGCCTTCCCCAGCTGTGCCGAGGTGGGATCACGGGCACGCAGCCTTCTGTGTCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504784.1
3UTR GCA 90 bp GGTGATCGGCTCGTGGGCAGCACGGGGAGCTCCTGCGGGTGGCACTaGTTCCCTGGCTTCTGCGTTTTGCGCATCTCCTTGACTGCCTGG +
Preference number: 1 (lower is better)
Translates to: GDRLVGSTGSSCGWH*FPGFCVLRISLTAW
Trigger: CCAGGCAGTCAAGGAGATGCGCAAAACGCAGAAGCCAGGGAAGCAGTGCCACCCGCAGGAGCTCCCCGTGCTGCCCACGAGCCGATCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR GCA 90 bp TTCACCCACAGCCCCTTGCATGCGTGTGGACATGCCCACGTGACGTaGCAACGTGCCCATGTGCCGATTCCAGACACCGGCCTGCCGGCG +
Preference number: 1 (lower is better)
Translates to: FTHSPLHACGHAHVT*QRAHVPIPDTGLPA
Trigger: CGCCGGCAGGCCGGTGTCTGGAATCGGCACATGGGCACGTTGGCACGTCACGTGGGCATGTCCACACGCATGCAAGGGGCTGTGGGTGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR CCA 90 bp TCGCCCTCTCCCGCGTTCTCTCCTTCCCTCCTGTCCGCTGCCGCCTaGTCAGCTGGTAAACCCGCCCCTCAGTTCCACCGATCAGCTTCG +
Preference number: 1 (lower is better)
Translates to: SPSPAFSPSLLSAAA*SAGKPAPQFHRSAS
Trigger: CGAAGCTGATCGGTGGAACTGAGGGGCGGGTTTACCAGCTGACCAGGCGGCAGCGGACAGGAGGGAAGGAGAGAACGCGGGAGAGGGCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR TCA 90 bp GGCAGTTCACCCACAGCCCCTTGCATGCGTGTGGACATGCCCACGTaGCGTGCCAACGTGCCCATGTGCCGATTCCAGACACCGGCCTGC +
Preference number: 1 (lower is better)
Translates to: GSSPTAPCMRVDMPT*RANVPMCRFQTPAC
Trigger: GCAGGCCGGTGTCTGGAATCGGCACATGGGCACGTTGGCACGTCACGTGGGCATGTCCACACGCATGCAAGGGGCTGTGGGTGAACTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR CCA 90 bp CCCGTTCCTGCAGGTTATAGGCCTCTCCAGGCTGCAGCCTGGGCCTaGCCCTATCCTGTGAGCTCCTGGGGGCCCAGCTTCTTCGTCTGT +
Preference number: 1 (lower is better)
Translates to: PVPAGYRPLQAAAWA*PYPVSSWGPSFFVC
Trigger: ACAGACGAAGAAGCTGGGCCCCCAGGAGCTCACAGGATAGGGCCAGGCCCAGGCTGCAGCCTGGAGAGGCCTATAACCTGCAGGAACGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR TCA 90 bp AGATCACCCAGGGTGTGGCAGGGACCCAGCGTTCATGCCTGTTGCTaGGGAGGACACCGAGGGAGGTGGCCAGCATTTGCCTGGCCACTC +
Preference number: 1 (lower is better)
Translates to: RSPRVWQGPSVHACC*GGHRGRWPAFAWPL
Trigger: GAGTGGCCAGGCAAATGCTGGCCACCTCCCTCGGTGTCCTCCTCAGCAACAGGCATGAACGCTGGGTCCCTGCCACACCCTGGGTGATCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR GCA 90 bp CATGCTGCCGAGATCACCCAGGGTGTGGCAGGGACCCAGCGTTCATaGCTGTTGCTGAGGAGGACACCGAGGGAGGTGGCCAGCATTTGC +
Preference number: 1 (lower is better)
Translates to: HAAEITQGVAGTQRS*LLLRRTPREVASIC
Trigger: GCAAATGCTGGCCACCTCCCTCGGTGTCCTCCTCAGCAACAGGCATGAACGCTGGGTCCCTGCCACACCCTGGGTGATCTCGGCAGCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR CCA 90 bp ACGACGGCGGGGTCCATGCTGGCCCAGTGGGTGGCGGCTGTCAGATaGTCCTTGTTGACACAGTTCTTCAGGCTGTCTGGGATCCGGCCT +
Preference number: 1 (lower is better)
Translates to: TTAGSMLAQWVAAVR*SLLTQFFRLSGIRP
Trigger: AGGCCGGATCCCAGACAGCCTGAAGAACTGTGTCAACAAGGACCATCTGACAGCCGCCACCCACTGGGCCAGCATGGACCCCGCCGTCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510739.1
3UTR CCA 90 bp GCTCGTGGGCAGCACGGGGAGCTCCTGCGGGTGGCACTGCTTCCCTaGCTTCTGCGTTTTGCGCATCTCCTTGACTGCCTGGTTACCTCT +
Preference number: 1 (lower is better)
Translates to: ARGQHGELLRVALLP*LLRFAHLLDCLVTS
Trigger: AGAGGTAACCAGGCAGTCAAGGAGATGCGCAAAACGCAGAAGCCAGGGAAGCAGTGCCACCCGCAGGAGCTCCCCGTGCTGCCCACGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR GCA 90 bp GTGGGTCTCCTGAGCAAACAAGAATCAGGAAAGCTGCCCAAAGGCTaGTCACTGCTGGACCAAAGCCAGGCCGCGGGCAATGCCGAGACC +
Preference number: 1 (lower is better)
Translates to: VGLLSKQESGKLPKG*SLLDQSQAAGNAET
Trigger: GGTCTCGGCATTGCCCGCGGCCTGGCTTTGGTCCAGCAGTGAGCAGCCTTTGGGCAGCTTTCCTGATTCTTGTTTGCTCAGGAGACCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR TCA 90 bp GCGGGTGGCACTGCTTCCCTGGCTTCTGCGTTTTGCGCATCTCCTTaGCTGCCTGGTTACCTCTGTTTGCATGTGATGGACCCCGCACCA +
Preference number: 1 (lower is better)
Translates to: AGGTASLASAFCASP*LPGYLCLHVMDPAP
Trigger: TGGTGCGGGGTCCATCACATGCAAACAGAGGTAACCAGGCAGTCAAGGAGATGCGCAAAACGCAGAAGCCAGGGAAGCAGTGCCACCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR TCA 90 bp CACTGGGCTGCATTACAAGCACGCATCTACCCGTGTGAGAAACCATaGAGAATCTTCCAGAGCGAACGCCCCAGCAGACGCTCCCGGCAG +
Preference number: 1 (lower is better)
Translates to: HWAALQARIYPCEKP*RIFQSERPSRRSRQ
Trigger: CTGCCGGGAGCGTCTGCTGGGGCGTTCGCTCTGGAAGATTCTTCATGGTTTCTCACACGGGTAGATGCGTGCTTGTAATGCAGCCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR GCA 90 bp CCCAAAAATCCAGATTCAAGGTTTCCTGGACATCAGCAGGCTGGGTaGCGATCGTGTGGCGCGTCAGAGTCCAGGTCACCCTCACTCCAG +
Preference number: 1 (lower is better)
Translates to: PKNPDSRFPGHQQAG*RSCGASESRSPSLQ
Trigger: CTGGAGTGAGGGTGACCTGGACTCTGACGCGCCACACGATCGGCACCCAGCCTGCTGATGTCCAGGAAACCTTGAATCTGGATTTTTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR CCA 90 bp GGTCCCCAAAAATCCAGATTCAAGGTTTCCTGGACATCAGCAGGCTaGGTGCCGATCGTGTGGCGCGTCAGAGTCCAGGTCACCCTCACT +
Preference number: 1 (lower is better)
Translates to: GPQKSRFKVSWTSAG*VPIVWRVRVQVTLT
Trigger: AGTGAGGGTGACCTGGACTCTGACGCGCCACACGATCGGCACCCAGCCTGCTGATGTCCAGGAAACCTTGAATCTGGATTTTTGGGGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR CCA 90 bp AGATTCAAGGTTTCCTGGACATCAGCAGGCTGGGTGCCGATCGTGTaGCGCGTCAGAGTCCAGGTCACCCTCACTCCAGATGTCACCTTT +
Preference number: 1 (lower is better)
Translates to: RFKVSWTSAGWVPIV*RVRVQVTLTPDVTF
Trigger: AAAGGTGACATCTGGAGTGAGGGTGACCTGGACTCTGACGCGCCACACGATCGGCACCCAGCCTGCTGATGTCCAGGAAACCTTGAATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR GCA 90 bp TACACAGACAAGAACGTTCATGGGAGAATAACTACTGACTTCTTCTaGTTAACGAGGAACGCGAAGGACACAGGGCAGAGCGCCCACAGG +
Preference number: 1 (lower is better)
Translates to: YTDKNVHGRITTDFF*LTRNAKDTGQSAHR
Trigger: CCTGTGGGCGCTCTGCCCTGTGTCCTTCGCGTTCCTCGTTAAGCAGAAGAAGTCAGTAGTTATTCTCCCATGAACGTTCTTGTCTGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
3UTR TCA 90 bp CCCAGCTTCTTCGTCTGTCTTCAGGGAAAAGCTGCTCTGAATCACTaGTCCCTGGCTACAAGTAGAAGCCAGACCAACCTAGTTCTCATC +
Preference number: 1 (lower is better)
Translates to: PSFFVCLQGKAALNH*SLATSRSQTNLVLI
Trigger: GATGAGAACTAGGTTGGTCTGGCTTCTACTTGTAGCCAGGGATCAGTGATTCAGAGCAGCTTTTCCCTGAAGACAGACGAAGAAGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR TCA 90 bp CTAAAAACTGTACACAGACAAGAACGTTCATGGGAGAATAACTACTaGCTTCTTCTGCTTAACGAGGAACGCGAAGGACACAGGGCAGAG +
Preference number: 1 (lower is better)
Translates to: LKTVHRQERSWENNY*LLLLNEEREGHRAE
Trigger: CTCTGCCCTGTGTCCTTCGCGTTCCTCGTTAAGCAGAAGAAGTCAGTAGTTATTCTCCCATGAACGTTCTTGTCTGTGTACAGTTTTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
3UTR-3UTR GCA 90 bp CGCCCACAGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTGCCCCCTCCCGGGCCACCACACAGATaGCTCCTCCACACACTCTGG +
Preference number: 2 (lower is better)
Translates to: RPQDGRRQATRGPALPPPGPPHR*LLHTLW
Trigger: CCAGAGTGTGTGGAGGAGGCATCTGTGTGGTGGCCC...GGGAGGGGGCAGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCTGTGGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
3UTR-3UTR GCA 90 bp AGGGTGCACGACGGCGGGGTCCATGCTGGCCCAGTGGGTGGCGGCTGTCAGATGGGCAAACTCCCCCACTaGTGGCCAGCGAGAGGCCTG +
Preference number: 2 (lower is better)
Translates to: RVHDGGVHAGPVGGGCQMGKLPH*WPARGL
Trigger: CAGGCCTCTCGCTGGCCAGCAGTGGGGGAGTTTGCC...CATCTGACAGCCGCCACCCACTGGGCCAGCATGGACCCCGCCGTCGTGCACCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510739.1
3UTR-3UTR GCA 90 bp AGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTGCCCCCTCCCGCCTCCTGGGCCACCACACAGATaGCTCCTCCACACACTCTGG +
Preference number: 2 (lower is better)
Translates to: RTDDDKRHEAQRCPLPPPGPPHR*LLHTLW
Trigger: CCAGAGTGTGTGGAGGAGGCATCTGTGTGGTGGCCC...AGGAGGCGGGAGGGGGCAGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
3UTR-3UTR GCA 90 bp TTAACGAGGAACGCGAAGGACACAGGGCAGAGCGCCCACAGGACGGACGACGACGGTTTCCGGGCCCTCTaGCCAGGCGCCGAGGCTGGA +
Preference number: 2 (lower is better)
Translates to: LTRNAKDTGQSAHRTDDDGFRAL*PGAEAG
Trigger: TCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACC...GTCGTCGTCCGTCCTGTGGGCGCTCTGCCCTGTGTCCTTCGCGTTCCTCGTTAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
3UTR-3UTR GCA 90 bp CTTAACGAGGAACGCGAAGGACACAGGGCAGAGCGCCCACAGGACGGACGACGAGGTTTCCGGGCCCTCTaGCCAGGCGCCGAGGCTGGA +
Preference number: 2 (lower is better)
Translates to: LNEEREGHRAERPQDGRRGFRAL*PGAEAG
Trigger: TCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACC...TCGTCGTCCGTCCTGTGGGCGCTCTGCCCTGTGTCCTTCGCGTTCCTCGTTAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
3UTR-3UTR GCA 90 bp AGCGCCCACAGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTGCCCCCTCGACCAGTCTCTGCAGTaGCAGGGCCACCACACAGAT +
Preference number: 2 (lower is better)
Translates to: SAHRTDDDKRHEAQRCPLDQSLQ*QGHHTD
Trigger: ATCTGTGTGGTGGCCCTGGCACTGCAGAGACTGGTC...GAGGGGGCAGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCTGTGGGCGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
3UTR-3UTR CCA 90 bp CCACGTGACGTGCCAACGTGCCCATGTGCCGATTCCAGACACCGGCCTGCCGGCGGACACCGAGGGAGGTaGCCAGCATTTGCCTGGCCA +
Preference number: 2 (lower is better)
Translates to: PRDVPTCPCADSRHRPAGGHRGR*PAFAWP
Trigger: TGGCCAGGCAAATGCTGGCCACCTCCCTCGGTGTCC...GCCGGCAGGCCGGTGTCTGGAATCGGCACATGGGCACGTTGGCACGTCACGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR CAA 90 bp GCCGAGATCACCCAGGGTGTGGCAGGGACCCAGCGTTCATGCCTGTaGCTGAGGAGGACACCGAGGGAGGTGGCCAGCATTTGCCTGGCC +
Preference number: 2 (lower is better)
Translates to: AEITQGVAGTQRSCL*LRRTPREVASICLA
Trigger: GGCCAGGCAAATGCTGGCCACCTCCCTCGGTGTCCTCCTCAGCAACAGGCATGAACGCTGGGTCCCTGCCACACCCTGGGTGATCTCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR-3UTR GCA 90 bp CCACGTGACGTGCCAACGTGCCCATGTGCCGATTCCAGACACCGGCCTGCCGGCCCAAAGGCTGCTCACTaGTGGACCAAAGCCAGGCCG +
Preference number: 2 (lower is better)
Translates to: PRDVPTCPCADSRHRPAGPKAAH*WTKARP
Trigger: CGGCCTGGCTTTGGTCCAGCAGTGAGCAGCCTTTGG...GCCGGCAGGCCGGTGTCTGGAATCGGCACATGGGCACGTTGGCACGTCACGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR-3UTR CCA 90 bp AGGGTGCACGACGGCGGGGTCCATGCTGGCCCAGTGGGTGGCGGCTGTCAGATGGTTCTTCAGGCTGTCTaGGATCCGGCCTGTGATGGC +
Preference number: 2 (lower is better)
Translates to: RVHDGGVHAGPVGGGCQMVLQAV*DPACDG
Trigger: GCCATCACAGGCCGGATCCCAGACAGCCTGAAGAAC...CATCTGACAGCCGCCACCCACTGGGCCAGCATGGACCCCGCCGTCGTGCACCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510739.1
3UTR-3UTR TCA 90 bp CAAACCGAGCTGGTGCCACACAACTCCCTCAGGTGTGCACCACGGGCAGTTCACCCTGGCCCTATCCTGTaGGCTCCTGGGGGCCCAGCT +
Preference number: 2 (lower is better)
Translates to: QTELVPHNSLRCAPRAVHPGPIL*APGGPA
Trigger: AGCTGGGCCCCCAGGAGCTCACAGGATAGGGCCAGG...GTGAACTGCCCGTGGTGCACACCTGAGGGAGTTGTGTGGCACCAGCTCGGTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR-3UTR GCA 90 bp CGCTGGGCACCGCCCAAGCTTTTCCTTTTGGAGCTGCTTCGTGATGCCGTCTTCGGTTTCCGGGCCCTCTaGCCAGGCGCCGAGGCTGGA +
Preference number: 2 (lower is better)
Translates to: RWAPPKLFLLELLRDAVFGFRAL*PGAEAG
Trigger: TCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACC...GAAGACGGCATCACGAAGCAGCTCCAAAAGGAAAAGCTTGGGCGGTGCCCAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
3UTR-3UTR CCA 90 bp TCCAAACCGAGCTGGTGCCACACAACTCCCTCAGGTGTGCACCACGGGCAGTTCAGACCGCCGCGCAACTaGGGCCGGGGGAAGCACCTT +
Preference number: 2 (lower is better)
Translates to: SKPSWCHTTPSGVHHGQFRPPRN*GRGKHL
Trigger: AAGGTGCTTCCCCCGGCCCCAGTTGCGCGGCGGTCT...GAACTGCCCGTGGTGCACACCTGAGGGAGTTGTGTGGCACCAGCTCGGTTTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR-3UTR CCA 90 bp TCCAAACCGAGCTGGTGCCACACAACTCCCTCAGGTGTGCACCACGGGCAGTTCCTTTTGCCAGGCACCTaGGGCCGGCAGTGCGGGGTC +
Preference number: 2 (lower is better)
Translates to: SKPSWCHTTPSGVHHGQFLLPGT*GRQCGV
Trigger: GACCCCGCACTGCCGGCCCCAGGTGCCTGGCAAAAG...GAACTGCCCGTGGTGCACACCTGAGGGAGTTGTGTGGCACCAGCTCGGTTTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR-3UTR CCA 90 bp AGCCCCTTGCATGCGTGTGGACATGCCCACGTGACGTGCCAACGTGCCCATGTGCTCTTCGTCGGTGTCTaGCCCAGCCTCCTGGGGGCT +
Preference number: 2 (lower is better)
Translates to: SPLHACGHAHVTCQRAHVLFVGV*PSLLGA
Trigger: AGCCCCCAGGAGGCTGGGCCAGACACCGACGAAGAG...CACATGGGCACGTTGGCACGTCACGTGGGCATGTCCACACGCATGCAAGGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR-3UTR TCA 90 bp CGCGCATTCCGAGTCTCCGGGATAAAGGAGTGTGGCCACTGGGCTGCATTACAACCGAGACCGCCCGTGTaGAGACCGCCGCGCAACTGG +
Preference number: 2 (lower is better)
Translates to: RAFRVSGIKECGHWAALQPRPPV*RPPRNW
Trigger: CCAGTTGCGCGGCGGTCTTCACACGGGCGGTCTCGG...TTGTAATGCAGCCCAGTGGCCACACTCCTTTATCCCGGAGACTCGGAATGCGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR-3UTR GCA 90 bp GACGGCGGGGTCCATGCTGGCCCAGTGGGTGGCGGCTGTCAGATGGTCCTTGTTGCAGATGAGGTTGGGTaGATCCTTCAGAGGGCCCTG +
Preference number: 2 (lower is better)
Translates to: DGGVHAGPVGGGCQMVLVADEVG*ILQRAL
Trigger: CAGGGCCCTCTGAAGGATGCACCCAACCTCATCTGC...AACAAGGACCATCTGACAGCCGCCACCCACTGGGCCAGCATGGACCCCGCCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510739.1
3UTR-3UTR CCA 90 bp GCTGCCACCCTCCACGTCCCCAGGACAGACGTCGATGGGCAGCGGGCACGCTGGCCAAGCTTTTCCTTTTaGAGCTGCTTCGTGATGCCG +
Preference number: 2 (lower is better)
Translates to: AATLHVPRTDVDGQRARWPSFSF*SCFVMP
Trigger: CGGCATCACGAAGCAGCTCCAAAAGGAAAAGCTTGG...CCAGCGTGCCCGCTGCCCATCGACGTCTGTCCTGGGGACGTGGAGGGTGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
3UTR-3UTR CCA 90 bp GTTCTGAAGTTTCTGCAAGAGCGACCCTTCCTCATCTCGCCCTCTCCCGCGTTCTCCTGGGGGCTGGGCTaGGGTGATCGGCTCGTGGGC +
Preference number: 2 (lower is better)
Translates to: VLKFLQERPFLISPSPAFSWGLG*GDRLVG
Trigger: GCCCACGAGCCGATCACCCCAGCCCAGCCCCCAGGA...GAACGCGGGAGAGGGCGAGATGAGGAAGGGTCGCTCTTGCAGAAACTTCAGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR CAA 90 bp GCGGGGTCCATGCTGGCCCAGTGGGTGGCGGCTGTCAGATGGTCCTaGTTGACACAGTTCTTCAGGCTGTCTGGGATCCGGCCTGTGATG +
Preference number: 2 (lower is better)
Translates to: AGSMLAQWVAAVRWS*LTQFFRLSGIRPVM
Trigger: CATCACAGGCCGGATCCCAGACAGCCTGAAGAACTGTGTCAACAAGGACCATCTGACAGCCGCCACCCACTGGGCCAGCATGGACCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510739.1
3UTR CAA 90 bp ACAACTCCCTCAGGTGTGCACCACGGGCAGTTCACCCACAGCCCCTaGCATGCGTGTGGACATGCCCACGTGACGTGCCAACGTGCCCAT +
Preference number: 2 (lower is better)
Translates to: TTPSGVHHGQFTHSP*HACGHAHVTCQRAH
Trigger: ATGGGCACGTTGGCACGTCACGTGGGCATGTCCACACGCATGCAAGGGGCTGTGGGTGAACTGCCCGTGGTGCACACCTGAGGGAGTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR-3UTR TCA 90 bp CTGGCCCAGTGGGTGGCGGCTGTCAGATGGTCCTTGTTGACACAGTTCTTCAGGGGCCAGCGAGAGGCCTaGGTACAGGCAAGTGTCCGG +
Preference number: 2 (lower is better)
Translates to: LAQWVAAVRWSLLTQFFRGQREA*VQASVR
Trigger: CCGGACACTTGCCTGTACTCAGGCCTCTCGCTGGCC...CCTGAAGAACTGTGTCAACAAGGACCATCTGACAGCCGCCACCCACTGGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510739.1
3UTR-3UTR TCA 90 bp AGCCCCTTGCATGCGTGTGGACATGCCCACGTGACGTGCCAACGTGCCCATGTGACCCGAGGCCTCGGCTaGCGCTGTCTTCCTCTAAAG +
Preference number: 2 (lower is better)
Translates to: SPLHACGHAHVTCQRAHVTRGLG*RCLPLK
Trigger: CTTTAGAGGAAGACAGCGTCAGCCGAGGCCTCGGGT...CACATGGGCACGTTGGCACGTCACGTGGGCATGTCCACACGCATGCAAGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR-3UTR TCA 90 bp AGCCCCTTGCATGCGTGTGGACATGCCCACGTGACGTGCCAACGTGCCCATGTGGTTCATGCCTGTTGCTaGGGAGGACACCGAGGGAGG +
Preference number: 2 (lower is better)
Translates to: SPLHACGHAHVTCQRAHVVHACC*GGHRGR
Trigger: CCTCCCTCGGTGTCCTCCTCAGCAACAGGCATGAAC...CACATGGGCACGTTGGCACGTCACGTGGGCATGTCCACACGCATGCAAGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR-3UTR CCA 90 bp CAAACCGAGCTGGTGCCACACAACTCCCTCAGGTGTGCACCACGGGCAGTTCACTGGACATCAGCAGGCTaGGTGCCGATCGTGTGGCGC +
Preference number: 2 (lower is better)
Translates to: QTELVPHNSLRCAPRAVHWTSAG*VPIVWR
Trigger: GCGCCACACGATCGGCACCCAGCCTGCTGATGTCCA...GTGAACTGCCCGTGGTGCACACCTGAGGGAGTTGTGTGGCACCAGCTCGGTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR-3UTR TCA 90 bp CCACGTGACGTGCCAACGTGCCCATGTGCCGATTCCAGACACCGGCCTGCCGGCTTTTGCGCATCTCCTTaGCTGCCTGGTTACCTCTGT +
Preference number: 2 (lower is better)
Translates to: PRDVPTCPCADSRHRPAGFCASP*LPGYLC
Trigger: ACAGAGGTAACCAGGCAGTCAAGGAGATGCGCAAAA...GCCGGCAGGCCGGTGTCTGGAATCGGCACATGGGCACGTTGGCACGTCACGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR-3UTR GCA 90 bp TTAACGAGGAACGCGAAGGACACAGGGCAGAGCGCCCACAGGACGGACGACGACGACCAGTCTCTGCAGTaGCAGGGCCACCACACAGAT +
Preference number: 2 (lower is better)
Translates to: LTRNAKDTGQSAHRTDDDDQSLQ*QGHHTD
Trigger: ATCTGTGTGGTGGCCCTGGCACTGCAGAGACTGGTC...GTCGTCGTCCGTCCTGTGGGCGCTCTGCCCTGTGTCCTTCGCGTTCCTCGTTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
3UTR-3UTR GCA 90 bp GCTGGCCCAGTGGGTGGCGGCTGTCAGATGGTCCTTGTTGACACAGTTCTTCAGTCTGCGGATCTCCCGTaGCGCCTCCTCTCGCATCTC +
Preference number: 2 (lower is better)
Translates to: AGPVGGGCQMVLVDTVLQSADLP*RLLSHL
Trigger: GAGATGCGAGAGGAGGCGGCACGGGAGATCCGCAGA...CTGAAGAACTGTGTCAACAAGGACCATCTGACAGCCGCCACCCACTGGGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510739.1
3UTR-3UTR GCA 90 bp CGCGCATTCCGAGTCTCCGGGATAAAGGAGTGTGGCCACTGGGCTGCATTACAAAGCACGGGGAGCTCCTaGGGGTGGCACTGCTTCCCT +
Preference number: 2 (lower is better)
Translates to: RAFRVSGIKECGHWAALQSTGSS*GWHCFP
Trigger: AGGGAAGCAGTGCCACCCGCAGGAGCTCCCCGTGCT...TTGTAATGCAGCCCAGTGGCCACACTCCTTTATCCCGGAGACTCGGAATGCGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR-3UTR GCA 90 bp CAAACCGAGCTGGTGCCACACAACTCCCTCAGGTGTGCACCACGGGCAGTTCACGAGGTGGCCAGCATTTaGCTGGCCACTCACCCACTG +
Preference number: 2 (lower is better)
Translates to: QTELVPHNSLRCAPRAVHEVASI*LATHPL
Trigger: CAGTGGGTGAGTGGCCAGGCAAATGCTGGCCACCTC...GTGAACTGCCCGTGGTGCACACCTGAGGGAGTTGTGTGGCACCAGCTCGGTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR-3UTR CCA 90 bp ATGGCTCTGCGGATCTCCCGTGCCGCCTCCTCTCGCATCTCGATGGATGCCTGCCTGTACCATGCAGCATaGGGGGTGCAGATGAGGTTG +
Preference number: 2 (lower is better)
Translates to: MALRISRAASSRISMDACLYHAA*GVQMRL
Trigger: CAACCTCATCTGCACCCCCCATGCTGCATGGTACAG...GCAGGCATCCATCGAGATGCGAGAGGAGGCGGCACGGGAGATCCGCAGAGCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510739.1
3UTR-3UTR CCA 90 bp CAGCCAACACCCCAGGCCAGAGTTGGCAAGGCCCGCCCGTTCCTGCAGGTTATAAGGACAAACCGAGTGTaGGGCTCAGGGAAAACCCCG +
Preference number: 2 (lower is better)
Translates to: QPTPQARVGKARPFLQVIRTNRV*GSGKTP
Trigger: CGGGGTTTTCCCTGAGCCCCACACTCGGTTTGTCCT...TATAACCTGCAGGAACGGGCGGGCCTTGCCAACTCTGGCCTGGGGTGTTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR-3UTR CCA 90 bp CGCATTCCGAGTCTCCGGGATAAAGGAGTGTGGCCACTGGGCTGCATTACAAGCGCTGCAGCCTGGGCCTaGCCCTATCCTGTGAGCTCC +
Preference number: 2 (lower is better)
Translates to: RIPSLRDKGVWPLGCITSAAAWA*PYPVSS
Trigger: GGAGCTCACAGGATAGGGCCAGGCCCAGGCTGCAGC...GCTTGTAATGCAGCCCAGTGGCCACACTCCTTTATCCCGGAGACTCGGAATGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR-3UTR CCA 90 bp CGCATTCCGAGTCTCCGGGATAAAGGAGTGTGGCCACTGGGCTGCATTACAAGCAAGGCTGCTCACTGCTaGACCAAAGCCAGGCCGCGG +
Preference number: 2 (lower is better)
Translates to: RIPSLRDKGVWPLGCITSKAAHC*TKARPR
Trigger: CCGCGGCCTGGCTTTGGTCCAGCAGTGAGCAGCCTT...GCTTGTAATGCAGCCCAGTGGCCACACTCCTTTATCCCGGAGACTCGGAATGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR-3UTR CCA 90 bp GGTAAACCCGCCCCTCAGTTCCACCGATCAGCTTCGCCGTTTTCTCAGATCCGCTCACCTTTCAGGCCATaGATATCCCGGCAGGGCCCC +
Preference number: 2 (lower is better)
Translates to: GKPAPQFHRSASPFSQIRSPFRP*ISRQGP
Trigger: GGGGCCCTGCCGGGATATCCATGGCCTGAAAGGTGA...GCGGATCTGAGAAAACGGCGAAGCTGATCGGTGGAACTGAGGGGCGGGTTTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR-3UTR CCA 90 bp GCAGACGCTCCCGGCAGACCACGCGCATTTTTAACATCAGATTTTCTTCCGTCCGGGGTGATCGGCTCGTaGGCAGCACGGGGAGCTCCT +
Preference number: 2 (lower is better)
Translates to: ADAPGRPRAFLTSDFLPSGVIGS*AARGAP
Trigger: AGGAGCTCCCCGTGCTGCCCACGAGCCGATCACCCC...GGACGGAAGAAAATCTGATGTTAAAAATGCGCGTGGTCTGCCGGGAGCGTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR CAA 90 bp TGCGGGTGGCACTGCTTCCCTGGCTTCTGCGTTTTGCGCATCTCCTaGACTGCCTGGTTACCTCTGTTTGCATGTGATGGACCCCGCACC +
Preference number: 2 (lower is better)
Translates to: CGWHCFPGFCVLRIS*TAWLPLFACDGPRT
Trigger: GGTGCGGGGTCCATCACATGCAAACAGAGGTAACCAGGCAGTCAAGGAGATGCGCAAAACGCAGAAGCCAGGGAAGCAGTGCCACCCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR-3UTR GCA 90 bp CGCTGGGCACCGCCCAAGCTTTTCCTTTTGGAGCTGCTTCGTGATGCCGTCTTCGACCAGTCTCTGCAGTaGCAGGGCCACCACACAGAT +
Preference number: 2 (lower is better)
Translates to: RWAPPKLFLLELLRDAVFDQSLQ*QGHHTD
Trigger: ATCTGTGTGGTGGCCCTGGCACTGCAGAGACTGGTC...GAAGACGGCATCACGAAGCAGCTCCAAAAGGAAAAGCTTGGGCGGTGCCCAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
3UTR-3UTR CCA 90 bp CAGATGGTCCTTGTTGACACAGTTCTTCAGGCTGTCTGGGATCCGGCCTGTGATTCCTTCAGAGGGCCCTaGCTAAAGCCCGCAGCGGGC +
Preference number: 2 (lower is better)
Translates to: QMVLVDTVLQAVWDPACDSFRGP*LKPAAG
Trigger: GCCCGCTGCGGGCTTTAGCCAGGGCCCTCTGAAGGA...ATCACAGGCCGGATCCCAGACAGCCTGAAGAACTGTGTCAACAAGGACCATCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510739.1
3UTR-3UTR CCA 90 bp GAGCCTGTGGGTCTCCTGAGCAAACAAGAATCAGGAAAGCTGCCCAAAGGCTGCCCCCGCCACAAAAGCTaGCATCCCGAGGACCTGCTC +
Preference number: 2 (lower is better)
Translates to: EPVGLLSKQESGKLPKGCPRHKS*HPEDLL
Trigger: GAGCAGGTCCTCGGGATGCCAGCTTTTGTGGCGGGG...GCAGCCTTTGGGCAGCTTTCCTGATTCTTGTTTGCTCAGGAGACCCACAGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR-3UTR CCA 90 bp TCCAAACCGAGCTGGTGCCACACAACTCCCTCAGGTGTGCACCACGGGCAGTTCGTGGCACTGCTTCCCTaGCTTCTGCGTTTTGCGCAT +
Preference number: 2 (lower is better)
Translates to: SKPSWCHTTPSGVHHGQFVALLP*LLRFAH
Trigger: ATGCGCAAAACGCAGAAGCCAGGGAAGCAGTGCCAC...GAACTGCCCGTGGTGCACACCTGAGGGAGTTGTGTGGCACCAGCTCGGTTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR-3UTR TCA 90 bp CGTCCCCAGGACAGACGTCGATGGGCAGCGGGCACGCTGGGCACCGCCCAAGCTAGGTTTTCTTTTTGTTaGCAGCTAAGCAAACAGATC +
Preference number: 2 (lower is better)
Translates to: RPQDRRRWAAGTLGTAQARFSFC*QLSKQI
Trigger: GATCTGTTTGCTTAGCTGTCAACAAAAAGAAAACCT...AGCTTGGGCGGTGCCCAGCGTGCCCGCTGCCCATCGACGTCTGTCCTGGGGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
3UTR-3UTR TCA 90 bp CAAACCGAGCTGGTGCCACACAACTCCCTCAGGTGTGCACCACGGGCAGTTCACCCCCGCACCAGATGGTaGTTTGTAGAAATGACCCGA +
Preference number: 2 (lower is better)
Translates to: QTELVPHNSLRCAPRAVHPRTRW*FVEMTR
Trigger: TCGGGTCATTTCTACAAATCACCATCTGGTGCGGGG...GTGAACTGCCCGTGGTGCACACCTGAGGGAGTTGTGTGGCACCAGCTCGGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR-3UTR CCA 90 bp GTCAGATGGTCCTTGTTGACACAGTTCTTCAGGCTGTCTGGGATCCGGCCTGTGAAACTCCCCCACTGCTaGCCAGCGAGAGGCCTGAGT +
Preference number: 2 (lower is better)
Translates to: VRWSLLTQFFRLSGIRPVKLPHC*PARGLS
Trigger: ACTCAGGCCTCTCGCTGGCCAGCAGTGGGGGAGTTT...CACAGGCCGGATCCCAGACAGCCTGAAGAACTGTGTCAACAAGGACCATCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510739.1
3UTR-3UTR CCA 90 bp GCAGACGCTCCCGGCAGACCACGCGCATTTTTAACATCAGATTTTCTTCCGTCCTGGGTGCCGATCGTGTaGCGCGTCAGAGTCCAGGTC +
Preference number: 2 (lower is better)
Translates to: ADAPGRPRAFLTSDFLPSWVPIV*RVRVQV
Trigger: GACCTGGACTCTGACGCGCCACACGATCGGCACCCA...GGACGGAAGAAAATCTGATGTTAAAAATGCGCGTGGTCTGCCGGGAGCGTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR-3UTR GCA 90 bp CGCGCATTCCGAGTCTCCGGGATAAAGGAGTGTGGCCACTGGGCTGCATTACAAAAGCTGCCCAAAGGCTaGTCACTGCTGGACCAAAGC +
Preference number: 2 (lower is better)
Translates to: RAFRVSGIKECGHWAALQKLPKG*SLLDQS
Trigger: GCTTTGGTCCAGCAGTGAGCAGCCTTTGGGCAGCTT...TTGTAATGCAGCCCAGTGGCCACACTCCTTTATCCCGGAGACTCGGAATGCGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR-3UTR GCA 90 bp TCCAAACCGAGCTGGTGCCACACAACTCCCTCAGGTGTGCACCACGGGCAGTTCAAGAATCAGGAAAGCTaGCCAAAGGCTGCTCACTGC +
Preference number: 2 (lower is better)
Translates to: SKPSWCHTTPSGVHHGQFKNQES*PKAAHC
Trigger: GCAGTGAGCAGCCTTTGGGCAGCTTTCCTGATTCTT...GAACTGCCCGTGGTGCACACCTGAGGGAGTTGTGTGGCACCAGCTCGGTTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR-3UTR TCA 90 bp TCCAAACCGAGCTGGTGCCACACAACTCCCTCAGGTGTGCACCACGGGCAGTTCCCGTGTGAGAAACCATaGAGAATCTTCCAGAGCGAA +
Preference number: 2 (lower is better)
Translates to: SKPSWCHTTPSGVHHGQFPCEKP*RIFQSE
Trigger: TTCGCTCTGGAAGATTCTTCATGGTTTCTCACACGG...GAACTGCCCGTGGTGCACACCTGAGGGAGTTGTGTGGCACCAGCTCGGTTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR-3UTR CCA 90 bp GGTAAACCCGCCCCTCAGTTCCACCGATCAGCTTCGCCGTTTTCTCAGATCCGCAGATTCAAGGTTTCCTaGACATCAGCAGGCTGGGTG +
Preference number: 2 (lower is better)
Translates to: GKPAPQFHRSASPFSQIRRFKVS*TSAGWV
Trigger: CACCCAGCCTGCTGATGTCCAGGAAACCTTGAATCT...GCGGATCTGAGAAAACGGCGAAGCTGATCGGTGGAACTGAGGGGCGGGTTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR-3UTR TCA 90 bp CGCGCATTCCGAGTCTCCGGGATAAAGGAGTGTGGCCACTGGGCTGCATTACAAGCTGCTCTGAATCACTaGTCCCTGGCTACAAGTAGA +
Preference number: 2 (lower is better)
Translates to: RAFRVSGIKECGHWAALQAALNH*SLATSR
Trigger: TCTACTTGTAGCCAGGGATCAGTGATTCAGAGCAGC...TTGTAATGCAGCCCAGTGGCCACACTCCTTTATCCCGGAGACTCGGAATGCGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR-3UTR GCA 90 bp AGAGTCTGGAGAAGCAAATCGTGCTGTGTTCACGTGATGGAACCGTTATCAGAACTGGGGAAGGCCCTCTaGTCTAGGAAGCGGGACCCG +
Preference number: 2 (lower is better)
Translates to: RVWRSKSCCVHVMEPLSELGKAL*SRKRDP
Trigger: CGGGTCCCGCTTCCTAGAGCAGAGGGCCTTCCCCAG...TTCTGATAACGGTTCCATCACGTGAACACAGCACGATTTGCTTCTCCAGACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504784.1
3UTR-3UTR TCA 90 bp TTGCTAGCCTACCACATCAGCAGGACGGCACTGGTGCAGGCGGGGACGCTGCCAAGGTTTTCTTTTTGTTaGCAGCTAAGCAAACAGATC +
Preference number: 2 (lower is better)
Translates to: LLAYHISRTALVQAGTLPRFSFC*QLSKQI
Trigger: GATCTGTTTGCTTAGCTGTCAACAAAAAGAAAACCT...TGGCAGCGTCCCCGCCTGCACCAGTGCCGTCCTGCTGATGTGGTAGGCTAGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
3UTR-3UTR TCA 90 bp TGGCACTGCTTCCCTGGCTTCTGCGTTTTGCGCATCTCCTTGACTGCCTGGTTAAGCCTGTGGGTCTCCTaGGCAAACAAGAATCAGGAA +
Preference number: 2 (lower is better)
Translates to: WHCFPGFCVLRISLTAWLSLWVS*ANKNQE
Trigger: TTCCTGATTCTTGTTTGCTCAGGAGACCCACAGGCT...TAACCAGGCAGTCAAGGAGATGCGCAAAACGCAGAAGCCAGGGAAGCAGTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR-3UTR GCA 90 bp GCTGGGCACCGCCCAAGCTTTTCCTTTTGGAGCTGCTTCGTGATGCCGTCTTCAACTACTGACTTCTTCTaGTTAACGAGGAACGCGAAG +
Preference number: 2 (lower is better)
Translates to: AGHRPSFSFWSCFVMPSSTTDFF*LTRNAK
Trigger: CTTCGCGTTCCTCGTTAAGCAGAAGAAGTCAGTAGT...TGAAGACGGCATCACGAAGCAGCTCCAAAAGGAAAAGCTTGGGCGGTGCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
3UTR-3UTR GCA 90 bp CAAAATGCATCACCAAGAGTCTGGAGAAGCAAATCGTGCTGTGTTCACGTGATGCTGTGTGCAGGAGCCTaGTCTGTCAACGTGCTGGTG +
Preference number: 2 (lower is better)
Translates to: QNASPRVWRSKSCCVHVMLCAGA*SVNVLV
Trigger: CACCAGCACGTTGACAGAGCAGGCTCCTGCACACAG...CATCACGTGAACACAGCACGATTTGCTTCTCCAGACTCTTGGTGATGCATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504784.1
3UTR-3UTR GCA 90 bp TGGCACTGCTTCCCTGGCTTCTGCGTTTTGCGCATCTCCTTGACTGCCTGGTTATCTTCAGGGAAAAGCTaGTCTGAATCACTGATCCCT +
Preference number: 2 (lower is better)
Translates to: WHCFPGFCVLRISLTAWLSSGKS*SESLIP
Trigger: AGGGATCAGTGATTCAGAGCAGCTTTTCCCTGAAGA...TAACCAGGCAGTCAAGGAGATGCGCAAAACGCAGAAGCCAGGGAAGCAGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR-3UTR CCA 90 bp AAACTGTACACAGACAAGAACGTTCATGGGAGAATAACTACTGACTTCTTCTGCCTCCTCCACACACTCTaGTCCGAGGGTTTCCGGGCC +
Preference number: 2 (lower is better)
Translates to: KLYTDKNVHGRITTDFFCLLHTL*SEGFRA
Trigger: GGCCCGGAAACCCTCGGACCAGAGTGTGTGGAGGAG...GCAGAAGAAGTCAGTAGTTATTCTCCCATGAACGTTCTTGTCTGTGTACAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
3UTR-3UTR GCA 90 bp CTTACGTGTGCATCTTTAATACAAATCCAGCTTCCCAATGAGAAAACCGTACCTCAACTCCCTCAGGTGTaGACCACGGGCAGTTCACCC +
Preference number: 2 (lower is better)
Translates to: LTCASLIQIQLPNEKTVPQLPQV*TTGSSP
Trigger: GGGTGAACTGCCCGTGGTGCACACCTGAGGGAGTTG...AGGTACGGTTTTCTCATTGGGAAGCTGGATTTGTATTAAAGATGCACACGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR-3UTR GCA 90 bp CTTTGTAATGTTCTAAAAACTGTACACAGACAAGAACGTTCATGGGAGAATAACGCCCGGACCAGTCTCTaGAGTGCCAGGGCCACCACA +
Preference number: 2 (lower is better)
Translates to: LCNVLKTVHRQERSWENNARTSL*SARATT
Trigger: TGTGGTGGCCCTGGCACTGCAGAGACTGGTCCGGGC...GTTATTCTCCCATGAACGTTCTTGTCTGTGTACAGTTTTTAGAACATTACAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
3UTR-3UTR GCA 90 bp GCCAAAAACTTACAAAATGCATCACCAAGAGTCTGGAGAAGCAAATCGTGCTGTAGGGAGCTGTCTGTGTaGAGGAGCCTGCTCTGTCAA +
Preference number: 2 (lower is better)
Translates to: AKNLQNASPRVWRSKSCCRELSV*RSLLCQ
Trigger: TTGACAGAGCAGGCTCCTGCACACAGACAGCTCCCT...ACAGCACGATTTGCTTCTCCAGACTCTTGGTGATGCATTTTGTAAGTTTTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504784.1
3UTR-3UTR CCA 90 bp CTTTGTAATGTTCTAAAAACTGTACACAGACAAGAACGTTCATGGGAGAATAACCTCCTCCACACACTCTaGTCCGAGGGTTTCCGGGCC +
Preference number: 2 (lower is better)
Translates to: LCNVLKTVHRQERSWENNLLHTL*SEGFRA
Trigger: GGCCCGGAAACCCTCGGACCAGAGTGTGTGGAGGAG...GTTATTCTCCCATGAACGTTCTTGTCTGTGTACAGTTTTTAGAACATTACAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
3UTR-3UTR TCA 90 bp CTTACGTGTGCATCTTTAATACAAATCCAGCTTCCCAATGAGAAAACCGTACCTACAGTGTGCACCCCTTaGAACCAGCTTCTTCACTCG +
Preference number: 2 (lower is better)
Translates to: LTCASLIQIQLPNEKTVPTVCTP*NQLLHS
Trigger: CGAGTGAAGAAGCTGGTTTCAAGGGGTGCACACTGT...AGGTACGGTTTTCTCATTGGGAAGCTGGATTTGTATTAAAGATGCACACGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR-3UTR TCA 90 bp CTTACGTGTGCATCTTTAATACAAATCCAGCTTCCCAATGAGAAAACCGTACCTCCTATCACCTGGGGATaGAGAGATCATACAGTGTGC +
Preference number: 2 (lower is better)
Translates to: LTCASLIQIQLPNEKTVPPITWG*RDHTVC
Trigger: GCACACTGTATGATCTCTTCATCCCCAGGTGATAGG...AGGTACGGTTTTCTCATTGGGAAGCTGGATTTGTATTAAAGATGCACACGTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR-3UTR CCA 90 bp CTTACGTGTGCATCTTTAATACAAATCCAGCTTCCCAATGAGAAAACCGTACCTATCTCCTTGACTGCCTaGTTACCTCTGTTTGCATGT +
Preference number: 2 (lower is better)
Translates to: LTCASLIQIQLPNEKTVPISLTA*LPLFAC
Trigger: ACATGCAAACAGAGGTAACCAGGCAGTCAAGGAGAT...AGGTACGGTTTTCTCATTGGGAAGCTGGATTTGTATTAAAGATGCACACGTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR TCA 72 bp AAAGCCAGGCCGCGGGCAATGCCGAGACCGCCCGTGTaGAGACCGCCGCGCAACTGGGGCCGGGGGAAGCAC +
Preference number: 3 (lower is better)
Translates to: KARPRAMPRPPV*RPPRNWGRGKH
Trigger: GTGCTTCCCCCGGCCCCAGTTGCGCGGCGGTCTTCACACGGGCGGTCTCGGCATTGCCCGCGGCCTGGCTTT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR TCA 72 bp GCGGCAAACTCCCCCACTGCTGGCCAGCGAGAGGCCTaGGTACAGGCAAGTGTCCGGCCTGGCAGAGGCGCC +
Preference number: 3 (lower is better)
Translates to: AANSPTAGQREA*VQASVRPGRGA
Trigger: GGCGCCTCTGCCAGGCCGGACACTTGCCTGTACTCAGGCCTCTCGCTGGCCAGCAGTGGGGGAGTTTGCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510739.1
3UTR CCA 72 bp CGCTGCCACCCTCCACGTCCCCAGGACAGACGTCGATaGGCAGCGGGCACGCTGGGCACCGCCCAAGCTTTT +
Preference number: 3 (lower is better)
Translates to: RCHPPRPQDRRR*AAGTLGTAQAF
Trigger: AAAAGCTTGGGCGGTGCCCAGCGTGCCCGCTGCCCATCGACGTCTGTCCTGGGGACGTGGAGGGTGGCAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
3UTR CCA 72 bp GAAGGCTGCGTGCCCGTGATCCCACCTCGGCACAGCTaGGGAAGGCCCTCTGCTCTAGGAAGCGGGACCCGG +
Preference number: 3 (lower is better)
Translates to: EGCVPVIPPRHS*GRPSALGSGTR
Trigger: CCGGGTCCCGCTTCCTAGAGCAGAGGGCCTTCCCCAGCTGTGCCGAGGTGGGATCACGGGCACGCAGCCTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504784.1
3UTR TCA 72 bp ACTGACGGGAGGCGGACACAGAAGGCTGCGTGCCCGTaGTCCCACCTCGGCACAGCTGGGGAAGGCCCTCTG +
Preference number: 3 (lower is better)
Translates to: TDGRRTQKAACP*SHLGTAGEGPL
Trigger: CAGAGGGCCTTCCCCAGCTGTGCCGAGGTGGGATCACGGGCACGCAGCCTTCTGTGTCCGCCTCCCGTCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504784.1
3UTR GCA 72 bp CTGCTCACTGCTGGACCAAAGCCAGGCCGCGGGCAATaGCGAGACCGCCCGTGTGAAGACCGCCGCGCAACT +
Preference number: 3 (lower is better)
Translates to: LLTAGPKPGRGQ*RDRPCEDRRAT
Trigger: AGTTGCGCGGCGGTCTTCACACGGGCGGTCTCGGCATTGCCCGCGGCCTGGCTTTGGTCCAGCAGTGAGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR GCA 72 bp GCATGCGTGTGGACATGCCCACGTGACGTGCCAACGTaGCCATGTGCCGATTCCAGACACCGGCCTGCCGGC +
Preference number: 3 (lower is better)
Translates to: ACVWTCPRDVPT*PCADSRHRPAG
Trigger: GCCGGCAGGCCGGTGTCTGGAATCGGCACATGGGCACGTTGGCACGTCACGTGGGCATGTCCACACGCATGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR CCA 72 bp CTAAAGCCCGCAGCGGGCGGCAAACTCCCCCACTGCTaGCCAGCGAGAGGCCTGAGTACAGGCAAGTGTCCG +
Preference number: 3 (lower is better)
Translates to: LKPAAGGKLPHC*PARGLSTGKCP
Trigger: CGGACACTTGCCTGTACTCAGGCCTCTCGCTGGCCAGCAGTGGGGGAGTTTGCCGCCCGCTGCGGGCTTTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510739.1
3UTR CCA 72 bp CCCGCGTTCTCTCCTTCCCTCCTGTCCGCTGCCGCCTaGTCAGCTGGTAAACCCGCCCCTCAGTTCCACCGA +
Preference number: 3 (lower is better)
Translates to: PAFSPSLLSAAA*SAGKPAPQFHR
Trigger: TCGGTGGAACTGAGGGGCGGGTTTACCAGCTGACCAGGCGGCAGCGGACAGGAGGGAAGGAGAGAACGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR-3UTR CAA 90 bp TCCAAACCGAGCTGGTGCCACACAACTCCCTCAGGTGTGCACCACGGGCAGTTCCACCCCAGGCCAGAGTaGGCAAGGCCCGCCCGTTCC +
Preference number: 3 (lower is better)
Translates to: SKPSWCHTTPSGVHHGQFHPRPE*ARPARS
Trigger: GGAACGGGCGGGCCTTGCCAACTCTGGCCTGGGGTG...GAACTGCCCGTGGTGCACACCTGAGGGAGTTGTGTGGCACCAGCTCGGTTTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR GCA 72 bp TGGCTAAAGCCCGCAGCGGGCGGCAAACTCCCCCACTaGTGGCCAGCGAGAGGCCTGAGTACAGGCAAGTGT +
Preference number: 3 (lower is better)
Translates to: WLKPAAGGKLPH*WPARGLSTGKC
Trigger: ACACTTGCCTGTACTCAGGCCTCTCGCTGGCCAGCAGTGGGGGAGTTTGCCGCCCGCTGCGGGCTTTAGCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510739.1
3UTR GCA 72 bp GAGATCACCCAGGGTGTGGCAGGGACCCAGCGTTCATaGCTGTTGCTGAGGAGGACACCGAGGGAGGTGGCC +
Preference number: 3 (lower is better)
Translates to: EITQGVAGTQRS*LLLRRTPREVA
Trigger: GGCCACCTCCCTCGGTGTCCTCCTCAGCAACAGGCATGAACGCTGGGTCCCTGCCACACCCTGGGTGATCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR CCA 72 bp TCAGGGTGCACGACGGCGGGGTCCATGCTGGCCCAGTaGGTGGCGGCTGTCAGATGGTCCTTGTTGACACAG +
Preference number: 3 (lower is better)
Translates to: SGCTTAGSMLAQ*VAAVRWSLLTQ
Trigger: CTGTGTCAACAAGGACCATCTGACAGCCGCCACCCACTGGGCCAGCATGGACCCCGCCGTCGTGCACCCTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510739.1
3UTR TCA 72 bp GAAAACACAGGTGAGACCCAGAGGCATCACCCCGACTaGCGGGAGGCGGACACAGAAGGCTGCGTGCCCGTG +
Preference number: 3 (lower is better)
Translates to: ENTGETQRHHPD*READTEGCVPV
Trigger: CACGGGCACGCAGCCTTCTGTGTCCGCCTCCCGTCAGTCGGGGTGATGCCTCTGGGTCTCACCTGTGTTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504784.1
3UTR TCA 72 bp AGGGTGTGGCAGGGACCCAGCGTTCATGCCTGTTGCTaGGGAGGACACCGAGGGAGGTGGCCAGCATTTGCC +
Preference number: 3 (lower is better)
Translates to: RVWQGPSVHACC*GGHRGRWPAFA
Trigger: GGCAAATGCTGGCCACCTCCCTCGGTGTCCTCCTCAGCAACAGGCATGAACGCTGGGTCCCTGCCACACCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR GCA 72 bp AGCCCCTTGCATGCGTGTGGACATGCCCACGTGACGTaGCAACGTGCCCATGTGCCGATTCCAGACACCGGC +
Preference number: 3 (lower is better)
Translates to: SPLHACGHAHVT*QRAHVPIPDTG
Trigger: GCCGGTGTCTGGAATCGGCACATGGGCACGTTGGCACGTCACGTGGGCATGTCCACACGCATGCAAGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR CCA 72 bp CAGCACGGGGAGCTCCTGCGGGTGGCACTGCTTCCCTaGCTTCTGCGTTTTGCGCATCTCCTTGACTGCCTG +
Preference number: 3 (lower is better)
Translates to: QHGELLRVALLP*LLRFAHLLDCL
Trigger: CAGGCAGTCAAGGAGATGCGCAAAACGCAGAAGCCAGGGAAGCAGTGCCACCCGCAGGAGCTCCCCGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR-3UTR CAA 90 bp CGTCCCCAGGACAGACGTCGATGGGCAGCGGGCACGCTGGGCACCGCCCAAGCTATTGTCCTGAGAAGTTaGCCAACTGCCTCATTCTGG +
Preference number: 3 (lower is better)
Translates to: RPQDRRRWAAGTLGTAQAIVLRS*PTASFW
Trigger: CCAGAATGAGGCAGTTGGCAAACTTCTCAGGACAAT...AGCTTGGGCGGTGCCCAGCGTGCCCGCTGCCCATCGACGTCTGTCCTGGGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
3UTR TCA 72 bp CCCACAGCCCCTTGCATGCGTGTGGACATGCCCACGTaGCGTGCCAACGTGCCCATGTGCCGATTCCAGACA +
Preference number: 3 (lower is better)
Translates to: PTAPCMRVDMPT*RANVPMCRFQT
Trigger: TGTCTGGAATCGGCACATGGGCACGTTGGCACGTCACGTGGGCATGTCCACACGCATGCAAGGGGCTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR GCA 72 bp GCAGTTCACCCACAGCCCCTTGCATGCGTGTGGACATaGCCACGTGACGTGCCAACGTGCCCATGTGCCGAT +
Preference number: 3 (lower is better)
Translates to: AVHPQPLACVWT*PRDVPTCPCAD
Trigger: ATCGGCACATGGGCACGTTGGCACGTCACGTGGGCATGTCCACACGCATGCAAGGGGCTGTGGGTGAACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR TCA 72 bp TGGCCCAGTGGGTGGCGGCTGTCAGATGGTCCTTGTTaGCACAGTTCTTCAGGCTGTCTGGGATCCGGCCTG +
Preference number: 3 (lower is better)
Translates to: WPSGWRLSDGPC*HSSSGCLGSGL
Trigger: CAGGCCGGATCCCAGACAGCCTGAAGAACTGTGTCAACAAGGACCATCTGACAGCCGCCACCCACTGGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510739.1
3UTR GCA 72 bp CCAGATTCAAGGTTTCCTGGACATCAGCAGGCTGGGTaGCGATCGTGTGGCGCGTCAGAGTCCAGGTCACCC +
Preference number: 3 (lower is better)
Translates to: PDSRFPGHQQAG*RSCGASESRSP
Trigger: GGGTGACCTGGACTCTGACGCGCCACACGATCGGCACCCAGCCTGCTGATGTCCAGGAAACCTTGAATCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR CCA 72 bp GTTTCCTGGACATCAGCAGGCTGGGTGCCGATCGTGTaGCGCGTCAGAGTCCAGGTCACCCTCACTCCAGAT +
Preference number: 3 (lower is better)
Translates to: VSWTSAGWVPIV*RVRVQVTLTPD
Trigger: ATCTGGAGTGAGGGTGACCTGGACTCTGACGCGCCACACGATCGGCACCCAGCCTGCTGATGTCCAGGAAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR-3UTR CAA 90 bp TTGCTAGCCTACCACATCAGCAGGACGGCACTGGTGCAGGCGGGGACGCTGCCACCCAAGCTTTTCCTTTaGGAGCTGCTTCGTGATGCC +
Preference number: 3 (lower is better)
Translates to: LLAYHISRTALVQAGTLPPKLFL*ELLRDA
Trigger: GGCATCACGAAGCAGCTCCAAAAGGAAAAGCTTGGG...TGGCAGCGTCCCCGCCTGCACCAGTGCCGTCCTGCTGATGTGGTAGGCTAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
3UTR-3UTR CAA 90 bp TCCATGCTGGCCCAGTGGGTGGCGGCTGTCAGATGGTCCTTGTTGACACAGTTCGGGGTGCAGATGAGGTaGGGTGCATCCTTCAGAGGG +
Preference number: 3 (lower is better)
Translates to: SMLAQWVAAVRWSLLTQFGVQMR*GASFRG
Trigger: CCCTCTGAAGGATGCACCCAACCTCATCTGCACCCC...GAACTGTGTCAACAAGGACCATCTGACAGCCGCCACCCACTGGGCCAGCATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510739.1
3UTR-3UTR CAA 90 bp CGCATTCCGAGTCTCCGGGATAAAGGAGTGTGGCCACTGGGCTGCATTACAAGCGCCGTCTTACTTCTTTaGCCAGGCACCTGGGGCCGG +
Preference number: 3 (lower is better)
Translates to: RIPSLRDKGVWPLGCITSAVLLL*PGTWGR
Trigger: CCGGCCCCAGGTGCCTGGCAAAAGAAGTAAGACGGC...GCTTGTAATGCAGCCCAGTGGCCACACTCCTTTATCCCGGAGACTCGGAATGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR-3UTR CAA 90 bp CGCGCATTCCGAGTCTCCGGGATAAAGGAGTGTGGCCACTGGGCTGCATTACAACCTGGCTTCTGCGTTTaGCGCATCTCCTTGACTGCC +
Preference number: 3 (lower is better)
Translates to: RAFRVSGIKECGHWAALQPGFCV*RISLTA
Trigger: GGCAGTCAAGGAGATGCGCAAAACGCAGAAGCCAGG...TTGTAATGCAGCCCAGTGGCCACACTCCTTTATCCCGGAGACTCGGAATGCGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR GCA 72 bp CTGAGCAAACAAGAATCAGGAAAGCTGCCCAAAGGCTaGTCACTGCTGGACCAAAGCCAGGCCGCGGGCAAT +
Preference number: 3 (lower is better)
Translates to: LSKQESGKLPKG*SLLDQSQAAGN
Trigger: ATTGCCCGCGGCCTGGCTTTGGTCCAGCAGTGAGCAGCCTTTGGGCAGCTTTCCTGATTCTTGTTTGCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR CCA 72 bp AAATCCAGATTCAAGGTTTCCTGGACATCAGCAGGCTaGGTGCCGATCGTGTGGCGCGTCAGAGTCCAGGTC +
Preference number: 3 (lower is better)
Translates to: KSRFKVSWTSAG*VPIVWRVRVQV
Trigger: GACCTGGACTCTGACGCGCCACACGATCGGCACCCAGCCTGCTGATGTCCAGGAAACCTTGAATCTGGATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR CCA 72 bp CCTGGCTTCTGCGTTTTGCGCATCTCCTTGACTGCCTaGTTACCTCTGTTTGCATGTGATGGACCCCGCACC +
Preference number: 3 (lower is better)
Translates to: PGFCVLRISLTA*LPLFACDGPRT
Trigger: GGTGCGGGGTCCATCACATGCAAACAGAGGTAACCAGGCAGTCAAGGAGATGCGCAAAACGCAGAAGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR TCA 72 bp ACTGCTTCCCTGGCTTCTGCGTTTTGCGCATCTCCTTaGCTGCCTGGTTACCTCTGTTTGCATGTGATGGAC +
Preference number: 3 (lower is better)
Translates to: TASLASAFCASP*LPGYLCLHVMD
Trigger: GTCCATCACATGCAAACAGAGGTAACCAGGCAGTCAAGGAGATGCGCAAAACGCAGAAGCCAGGGAAGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR TCA 72 bp CAAGAGTCTGGAGAAGCAAATCGTGCTGTGTTCACGTaGTGGAACCGTTATCAGAAACTGCTGGGTCGTATG +
Preference number: 3 (lower is better)
Translates to: QESGEANRAVFT*WNRYQKLLGRM
Trigger: CATACGACCCAGCAGTTTCTGATAACGGTTCCATCACGTGAACACAGCACGATTTGCTTCTCCAGACTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504784.1
3UTR GCA 72 bp AAGAACGTTCATGGGAGAATAACTACTGACTTCTTCTaGTTAACGAGGAACGCGAAGGACACAGGGCAGAGC +
Preference number: 3 (lower is better)
Translates to: KNVHGRITTDFF*LTRNAKDTGQS
Trigger: GCTCTGCCCTGTGTCCTTCGCGTTCCTCGTTAAGCAGAAGAAGTCAGTAGTTATTCTCCCATGAACGTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
3UTR TCA 72 bp GTACACAGACAAGAACGTTCATGGGAGAATAACTACTaGCTTCTTCTGCTTAACGAGGAACGCGAAGGACAC +
Preference number: 3 (lower is better)
Translates to: VHRQERSWENNY*LLLLNEEREGH
Trigger: GTGTCCTTCGCGTTCCTCGTTAAGCAGAAGAAGTCAGTAGTTATTCTCCCATGAACGTTCTTGTCTGTGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
3UTR-3UTR CAA 90 bp CTTACGTGTGCATCTTTAATACAAATCCAGCTTCCCAATGAGAAAACCGTACCTTTTCTTCCGTCCATTTaGGAAAGGGTTTTGCTGTCA +
Preference number: 3 (lower is better)
Translates to: LTCASLIQIQLPNEKTVPFLPSI*ERVLLS
Trigger: TGACAGCAAAACCCTTTCCAAAATGGACGGAAGAAA...AGGTACGGTTTTCTCATTGGGAAGCTGGATTTGTATTAAAGATGCACACGTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR GCA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCCGACGGCGGGGTCCATaGTGGCCCAGTGGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSRRRGP*WPSGWR
Trigger: CCGCCACCCACTGGGCCAGCATGGACCCCGCCGTCG...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
ENST00000504092.5
CDS-3UTR CCA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCCGGCGGGGTCCATGCTaGCCCAGTGGGTGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSRRGPC*PSGWRL
Trigger: CAGCCGCCACCCACTGGGCCAGCATGGACCCCGCCG...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
ENST00000504092.5
CDS-3UTR TCA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCGGTCCTGCAGGGTGCTaGCACGCTGCAGCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSGPAGC*HAAAPA
Trigger: CGCTGGGGCTGCAGCGTGTCAGCACCCTGCAGGACC...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000504092.5
CDS-3UTR GCA 90 bp CGTCCCCAGGACAGACGTCGATGGGCAGCGGGCACGCTGGGCACCGCCCAAGCTCGACGGCGGGGTCCATaGTGGCCCAGTGGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: RPQDRRRWAAGTLGTAQARRRGP*WPSGWR
Trigger: CCGCCACCCACTGGGCCAGCATGGACCCCGCCGTCG...AGCTTGGGCGGTGCCCAGCGTGCCCGCTGCCCATCGACGTCTGTCCTGGGGACG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR GCA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCGGTTTCCGGGCCCTCTaGCCAGGCGCCGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSGFRAL*PGAEAG
Trigger: TCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACC...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
ENST00000504092.5
CDS-3UTR CCA 90 bp AGCGCCCACAGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTGCCCCCTCCGGCGGGGTCCATGCTaGCCCAGTGGGTGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: SAHRTDDDKRHEAQRCPLRRGPC*PSGWRL
Trigger: CAGCCGCCACCCACTGGGCCAGCATGGACCCCGCCG...GAGGGGGCAGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCTGTGGGCGCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CCA 90 bp GGGTGCACGACGGCGGGGTCCATGCTGGCCCAGTGGGTGGCGGCTGTCAGATGGCGGCGGGGTCCATGCTaGCCCAGTGGGTGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: GCTTAGSMLAQWVAAVRWRRGPC*PSGWRL
Trigger: CAGCCGCCACCCACTGGGCCAGCATGGACCCCGCCG...CCATCTGACAGCCGCCACCCACTGGGCCAGCATGGACCCCGCCGTCGTGCACCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510739.1
CDS-3UTR CCA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCCAGCTGGGATGCCAGTaGGGGCCACGCCCACCACGC +
Preference number: 4 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSQLGCQ*GPRPPR
Trigger: GCGTGGTGGGCGTGGCCCCCACTGGCATCCCAGCTG...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
ENST00000504092.5
CDS-3UTR CCA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCCCCAGGCGCCGAGGCTaGAGAGCTCCTCCCGGGCTA +
Preference number: 4 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSPRRRG*RAPPGL
Trigger: TAGCCCGGGAGGAGCTCTCCAGCCTCGGCGCCTGGG...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
ENST00000504092.5
CDS-3UTR TCA 90 bp CGTCCCCAGGACAGACGTCGATGGGCAGCGGGCACGCTGGGCACCGCCCAAGCTGGTCCTGCAGGGTGCTaGCACGCTGCAGCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: RPQDRRRWAAGTLGTAQAGPAGC*HAAAPA
Trigger: CGCTGGGGCTGCAGCGTGTCAGCACCCTGCAGGACC...AGCTTGGGCGGTGCCCAGCGTGCCCGCTGCCCATCGACGTCTGTCCTGGGGACG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR GCA 90 bp AGCGCCCACAGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTGCCCCCTCCGCAGCGCCACTGCCTaGCCCACGCGACCAAGTCCG +
Preference number: 4 (lower is better)
Translates to: SAHRTDDDKRHEAQRCPLRSATA*PTRPSP
Trigger: CGGACTTGGTCGCGTGGGGCAGGCAGTGGCGCTGCG...GAGGGGGCAGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCTGTGGGCGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR GCA 90 bp CCTCCTCCACACACTCTGGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGACGACGGCGGGGTCCATaGTGGCCCAGTGGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: PPPHTLVRGFPGPLPRRRRRRGP*WPSGWR
Trigger: CCGCCACCCACTGGGCCAGCATGGACCCCGCCGTCG...TCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACCAGAGTGTGTGGAGGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CCA 90 bp AGCGCCCACAGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTGCCCCCTCCAGCTGGGATGCCAGTaGGGGCCACGCCCACCACGC +
Preference number: 4 (lower is better)
Translates to: SAHRTDDDKRHEAQRCPLQLGCQ*GPRPPR
Trigger: GCGTGGTGGGCGTGGCCCCCACTGGCATCCCAGCTG...GAGGGGGCAGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCTGTGGGCGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CCA 90 bp GCTGCCACCCTCCACGTCCCCAGGACAGACGTCGATGGGCAGCGGGCACGCTGGCAGCTGGGATGCCAGTaGGGGCCACGCCCACCACGC +
Preference number: 4 (lower is better)
Translates to: AATLHVPRTDVDGQRARWQLGCQ*GPRPPR
Trigger: GCGTGGTGGGCGTGGCCCCCACTGGCATCCCAGCTG...CCAGCGTGCCCGCTGCCCATCGACGTCTGTCCTGGGGACGTGGAGGGTGGCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR TCA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCCGCGACCAAGTCCGATaGTGCCCAAGGTCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSRDQVR*CPRSPR
Trigger: GCGGGGAGACCTTGGGCATCATCGGACTTGGTCGCG...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR TCA 90 bp CTGGCCAGCGAGAGGCCTGAGTACAGGCAAGTGTCCGGCCTGGCAGAGGCGCCGGGTCCTGCAGGGTGCTaGCACGCTGCAGCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: LASERPEYRQVSGLAEAPGPAGC*HAAAPA
Trigger: CGCTGGGGCTGCAGCGTGTCAGCACCCTGCAGGACC...CGGCGCCTCTGCCAGGCCGGACACTTGCCTGTACTCAGGCCTCTCGCTGGCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510739.1
CDS-3UTR TCA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCCTGGGATCCGGCCTGTaGTGGCTCTGCGGATCTCCC +
Preference number: 4 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSLGSGL*WLCGSP
Trigger: GGGAGATCCGCAGAGCCATCACAGGCCGGATCCCAG...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
ENST00000504092.5
CDS-3UTR GCA 90 bp CGTCCCCAGGACAGACGTCGATGGGCAGCGGGCACGCTGGGCACCGCCCAAGCTCGCTCTGGACTCGTGTaGCCTCCCGCAGCGCCTGGT +
Preference number: 4 (lower is better)
Translates to: RPQDRRRWAAGTLGTAQARSGLV*PPAAPG
Trigger: ACCAGGCGCTGCGGGAGGGCACACGAGTCCAGAGCG...AGCTTGGGCGGTGCCCAGCGTGCCCGCTGCCCATCGACGTCTGTCCTGGGGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR GCA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCAAGGGTTCCGACTCGTaGACATCCAGGGCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSKGSDS*TSRAAP
Trigger: CGGCGCGGCCCTGGATGTGCACGAGTCGGAACCCTT...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
ENST00000504092.5
CDS-3UTR GCA 90 bp CTCCTCCACACACTCTGGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGGTTTCCGGGCCCTCTaGCCAGGCGCCGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: LLHTLWSEGFRALCPGAEGFRAL*PGAEAG
Trigger: TCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACC...CTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACCAGAGTGTGTGGAGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR GCA 90 bp CAGGGCAGAGCGCCCACAGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTGGTTTCCGGGCCCTCTaGCCAGGCGCCGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: QGRAPTGRTTTSDTRPSAGFRAL*PGAEAG
Trigger: TCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACC...AGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCTGTGGGCGCTCTGCCCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR GCA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCCGCAGCGCCACTGCCTaGCCCACGCGACCTAAATCC +
Preference number: 4 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSRSATA*PTRPKS
Trigger: GGATTTAGGTCGCGTGGGGCAGGCAGTGGCGCTGCG...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504092.5
CDS-3UTR GCA 90 bp CCACGTGACGTGCCAACGTGCCCATGTGCCGATTCCAGACACCGGCCTGCCGGCGGCCCGGGCCTGCCGTaGTCCCGTCCCTCCAACTCC +
Preference number: 4 (lower is better)
Translates to: PRDVPTCPCADSRHRPAGGPGLP*SRPSNS
Trigger: GGAGTTGGAGGGACGGGAGCACGGCAGGCCCGGGCC...GCCGGCAGGCCGGTGTCTGGAATCGGCACATGGGCACGTTGGCACGTCACGTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR CCA 90 bp ATCAGCAGGACGGCACTGGTGCAGGCGGGGACGCTGCCACCCTCCACGTCCCCATCTCCCCGCGGATCCTaGCAGCGCCGGACGCCACCT +
Preference number: 4 (lower is better)
Translates to: ISRTALVQAGTLPPSTSPSPRGS*QRRTPP
Trigger: AGGTGGCGTCCGGCGCTGCCAGGATCCGCGGGGAGA...TGGGGACGTGGAGGGTGGCAGCGTCCCCGCCTGCACCAGTGCCGTCCTGCTGAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR CCA 90 bp CACACACTCTGGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGACCCAGGCGCCGAGGCTaGAGAGCTCCTCCCGGGCTA +
Preference number: 4 (lower is better)
Translates to: HTLWSEGFRALCPGAEAGPRRRG*RAPPGL
Trigger: TAGCCCGGGAGGAGCTCTCCAGCCTCGGCGCCTGGG...TCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACCAGAGTGTGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CCA 90 bp AGCGCCCACAGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTGCCCCCTCTCAGCAGGACGGCACTaGTGCAGGCGGGGACGCTGC +
Preference number: 4 (lower is better)
Translates to: SAHRTDDDKRHEAQRCPLSAGRH*CRRGRC
Trigger: GCAGCGTCCCCGCCTGCACCAGTGCCGTCCTGCTGA...GAGGGGGCAGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCTGTGGGCGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR CCA 90 bp ATTGAGCTCAGGGTGCACGACGGCGGGGTCCATGCTGGCCCAGTGGGTGGCGGCGGGCGGCACTGGCCGTaGGGGCACCTGAAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: IELRVHDGGVHAGPVGGGGRHWP*GHLKGS
Trigger: GGAACCCTTCAGGTGCCCCCACGGCCAGTGCCGCCC...GCCGCCACCCACTGGGCCAGCATGGACCCCGCCGTCGTGCACCCTGAGCTCAAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510739.1
CDS-3UTR CCA 90 bp GCTCAGGGTGCACGACGGCGGGGTCCATGCTGGCCCAGTGGGTGGCGGCTGTCAGGCAGAGGCGCCGTCTaGAGGTCAAGGCCGGCAGGA +
Preference number: 4 (lower is better)
Translates to: AQGARRRGPCWPSGWRLSGRGAV*RSRPAG
Trigger: TCCTGCCGGCCTTGACCTCCAGACGGCGCCTCTGCC...TGACAGCCGCCACCCACTGGGCCAGCATGGACCCCGCCGTCGTGCACCCTGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510739.1
CDS-3UTR TCA 90 bp GCTGCCACCCTCCACGTCCCCAGGACAGACGTCGATGGGCAGCGGGCACGCTGGGCGGCAGGCCCTTGTTaGGCAAGTGCGAGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: AATLHVPRTDVDGQRARWAAGPC*ASASCP
Trigger: TGGGCAGCTCGCACTTGCTCAACAAGGGCCTGCCGC...CCAGCGTGCCCGCTGCCCATCGACGTCTGTCCTGGGGACGTGGAGGGTGGCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR TCA 90 bp CGTCCCCAGGACAGACGTCGATGGGCAGCGGGCACGCTGGGCACCGCCCAAGCTGCGGCAGGCCCTTGTTaGGCAAGTGCGAGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: RPQDRRRWAAGTLGTAQAAAGPC*ASASCP
Trigger: TGGGCAGCTCGCACTTGCTCAACAAGGGCCTGCCGC...AGCTTGGGCGGTGCCCAGCGTGCCCGCTGCCCATCGACGTCTGTCCTGGGGACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR TCA 90 bp CGTCCCCAGGACAGACGTCGATGGGCAGCGGGCACGCTGGGCACCGCCCAAGCTCGCGACCAAGTCCGATaGTGCCCAAGGTCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: RPQDRRRWAAGTLGTAQARDQVR*CPRSPR
Trigger: GCGGGGAGACCTTGGGCATCATCGGACTTGGTCGCG...AGCTTGGGCGGTGCCCAGCGTGCCCGCTGCCCATCGACGTCTGTCCTGGGGACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR TCA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCGGTGGTTGTGCTCGTTaGGGCCGCAGTGCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSGGCAR*GRSAGS
Trigger: TGACCCTGCACTGCGGCCTCAACGAGCACAACCACC...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000504092.5
CDS-3UTR TCA 90 bp AGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTGCCCCCTCCCGCCTCCTCTGGGATCCGGCCTGTaGTGGCTCTGCGGATCTCCC +
Preference number: 4 (lower is better)
Translates to: RTDDDKRHEAQRCPLPPPLGSGL*WLCGSP
Trigger: GGGAGATCCGCAGAGCCATCACAGGCCGGATCCCAG...AGGAGGCGGGAGGGGGCAGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR TCA 90 bp CACACACTCTGGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGCAGGGGCCCGTTCATaGTCGGAGGTCGGACGCCTG +
Preference number: 4 (lower is better)
Translates to: HTLWSEGFRALCPGAEAGAGARS*SEVGRL
Trigger: CAGGCGTCCGACCTCCGATCATGAACGGGCCCCTGC...TCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACCAGAGTGTGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382952.8
CDS-3UTR TCA 90 bp AGGGTGCACGACGGCGGGGTCCATGCTGGCCCAGTGGGTGGCGGCTGTCAGATGGGCCGTGGGGGCACCTaGAGGGTTCCGACTCGTGCA +
Preference number: 4 (lower is better)
Translates to: RVHDGGVHAGPVGGGCQMGRGGT*RVPTRA
Trigger: TGCACGAGTCGGAACCCTTCAGGTGCCCCCACGGCC...CATCTGACAGCCGCCACCCACTGGGCCAGCATGGACCCCGCCGTCGTGCACCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510739.1
CDS-3UTR GCA 90 bp GCGAGAGGCCTGAGTACAGGCAAGTGTCCGGCCTGGCAGAGGCGCCGTCTGGAGCGCAGCGCCACTGCCTaGCCCACGCGACCAAGTCCG +
Preference number: 4 (lower is better)
Translates to: ARGLSTGKCPAWQRRRLERSATA*PTRPSP
Trigger: CGGACTTGGTCGCGTGGGGCAGGCAGTGGCGCTGCG...CTCCAGACGGCGCCTCTGCCAGGCCGGACACTTGCCTGTACTCAGGCCTCTCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510739.1
CDS-3UTR GCA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCTCGTTGAGGCCGCAGTaGAGGGTCACGCAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSSLRPQ*RVTQSL
Trigger: CAGCGACTGCGTGACCCTGCACTGCGGCCTCAACGA...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000504092.5
CDS-3UTR GCA 90 bp GCTGCCACCCTCCACGTCCCCAGGACAGACGTCGATGGGCAGCGGGCACGCTGGAAGGGTTCCGACTCGTaGACATCCAGGGCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: AATLHVPRTDVDGQRARWKGSDS*TSRAAP
Trigger: CGGCGCGGCCCTGGATGTGCACGAGTCGGAACCCTT...CCAGCGTGCCCGCTGCCCATCGACGTCTGTCCTGGGGACGTGGAGGGTGGCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR GCA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCTCTGCGGATCTCCCGTaGCGCCTCCTCTCGCATCTC +
Preference number: 4 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSSADLP*RLLSHL
Trigger: GAGATGCGAGAGGAGGCGGCACGGGAGATCCGCAGA...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
ENST00000504092.5
CDS-3UTR GCA 90 bp CGCCCACAGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTGCCCCCTCCCCCATTGAGCTCAGGGTaGACGACGGCGGGGTCCATG +
Preference number: 4 (lower is better)
Translates to: RPQDGRRQATRGPALPPPPLSSG*TTAGSM
Trigger: CATGGACCCCGCCGTCGTGCACCCTGAGCTCAATGG...GGGAGGGGGCAGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCTGTGGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR GCA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCCCATTGAGCTCAGGGTaGACGACGGCGGGGTCCATG +
Preference number: 4 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSPLSSG*TTAGSM
Trigger: CATGGACCCCGCCGTCGTGCACCCTGAGCTCAATGG...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
ENST00000504092.5
CDS-3UTR GCA 90 bp AGCGGGACCCGGGTCCTCGCAGGGTCGTCGCGGGGCCGCCACGGGAGAAGGGGGAGGGAGCTGTCTGTGTaGAGGAGCCTGCTCTGTCAA +
Preference number: 4 (lower is better)
Translates to: SGTRVLAGSSRGRHGRRGRELSV*RSLLCQ
Trigger: TTGACAGAGCAGGCTCCTGCACACAGACAGCTCCCT...CCCCCTTCTCCCGTGGCGGCCCCGCGACGACCCTGCGAGGACCCGGGTCCCGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504784.1
CDS-3UTR CCA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCATCTGCTCGACGCTCTaGACTCGTGTGCCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSICSTL*TRVPSR
Trigger: GCGGGAGGGCACACGAGTCCAGAGCGTCGAGCAGAT...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR CCA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCTGCTGGCCCAGTGGGTaGCGGCTGTCAGATGGTCCT +
Preference number: 4 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSCWPSG*RLSDGP
Trigger: AGGACCATCTGACAGCCGCCACCCACTGGGCCAGCA...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
ENST00000504092.5
CDS-3UTR CCA 90 bp CGCCCACAGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTGCCCCCTCCCTCCATGCTGGCCCAGTaGGTGGCGGCTGTCAGATGG +
Preference number: 4 (lower is better)
Translates to: RPQDGRRQATRGPALPPPSMLAQ*VAAVRW
Trigger: CCATCTGACAGCCGCCACCCACTGGGCCAGCATGGA...GGGAGGGGGCAGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCTGTGGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CCA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCTCCATGCTGGCCCAGTaGGTGGCGGCTGTCAGATGG +
Preference number: 4 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSSMLAQ*VAAVRW
Trigger: CCATCTGACAGCCGCCACCCACTGGGCCAGCATGGA...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
ENST00000504092.5
CDS-3UTR CCA 90 bp CGCCCACAGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTGCCCCCTCCCACCTTCCACAGCAGCTaGGATGCCAGTGGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: RPQDGRRQATRGPALPPPTFHSS*DASGGH
Trigger: GTGGCCCCCACTGGCATCCCAGCTGCTGTGGAAGGT...GGGAGGGGGCAGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCTGTGGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CCA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCACCTTCCACAGCAGCTaGGATGCCAGTGGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSTFHSS*DASGGH
Trigger: GTGGCCCCCACTGGCATCCCAGCTGCTGTGGAAGGT...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
ENST00000504092.5
CDS-3UTR CCA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCTCGGGCTTGACGGTTTaGCCAGGAGAAGGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSSGLTV*PGEGAW
Trigger: CCACGCCCCTTCTCCTGGCCAAACCGTCAAGCCCGA...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
ENST00000504092.5
CDS-3UTR CCA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCCTCCTCCACACACTCTaGTCCGAGGGTTTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSLLHTL*SEGFRA
Trigger: GGCCCGGAAACCCTCGGACCAGAGTGTGTGGAGGAG...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CCA 90 bp CTCCTCCACACACTCTGGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGCAGGACAGACGTCGATaGGCAGCGGGCACGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LLHTLWSEGFRALCPGAEQDRRR*AAGTLG
Trigger: GCCCAGCGTGCCCGCTGCCCATCGACGTCTGTCCTG...CTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACCAGAGTGTGTGGAGGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR CCA 90 bp CCTCCTCCACACACTCTGGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGATCAGCAGGACGGCACTaGTGCAGGCGGGGACGCTGC +
Preference number: 4 (lower is better)
Translates to: PPPHTLVRGFPGPLPRRRSAGRH*CRRGRC
Trigger: GCAGCGTCCCCGCCTGCACCAGTGCCGTCCTGCTGA...TCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACCAGAGTGTGTGGAGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR CCA 90 bp GCTCAGGGTGCACGACGGCGGGGTCCATGCTGGCCCAGTGGGTGGCGGCTGTCATCCTTCAGAGGGCCCTaGCTAAAGCCCGCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: AQGARRRGPCWPSGWRLSSFRGP*LKPAAG
Trigger: GCCCGCTGCGGGCTTTAGCCAGGGCCCTCTGAAGGA...TGACAGCCGCCACCCACTGGGCCAGCATGGACCCCGCCGTCGTGCACCCTGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510739.1
CDS-3UTR TCA 90 bp CTCCTCCACACACTCTGGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCAGGGGCCCGTTCATaGTCGGAGGTCGGACGCCAA +
Preference number: 4 (lower is better)
Translates to: LLHTLWSEGFRALCPGAEAGARS*SEVGRQ
Trigger: TTGGCGTCCGACCTCCGATCATGAACGGGCCCCTGC...CTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACCAGAGTGTGTGGAGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290921.10
CDS-3UTR TCA 90 bp GTGCACGACGGCGGGGTCCATGCTGGCCCAGTGGGTGGCGGCTGTCAGATGGTCCGCGACCAAGTCCGATaGTGCCCAAGGTCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: VHDGGVHAGPVGGGCQMVRDQVR*CPRSPR
Trigger: GCGGGGAGACCTTGGGCATCATCGGACTTGGTCGCG...GACCATCTGACAGCCGCCACCCACTGGGCCAGCATGGACCCCGCCGTCGTGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510739.1
CDS-3UTR TCA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCCGTAGAAGAGCACGTTaGAGCCGAAGGCCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSRRRAR*SRRPWP
Trigger: GGGCCAAGGCCTTCGGCTTCAACGTGCTCTTCTACG...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000504092.5
CDS-3UTR TCA 90 bp AGCGCCCACAGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTGCCCCCTCGGTGGTTGTGCTCGTTaGGGCCGCAGTGCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: SAHRTDDDKRHEAQRCPLGGCAR*GRSAGS
Trigger: TGACCCTGCACTGCGGCCTCAACGAGCACAACCACC...GAGGGGGCAGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCTGTGGGCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR TCA 90 bp CACACACTCTGGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGACTGGGATCCGGCCTGTaGTGGCTCTGCGGATCTCCC +
Preference number: 4 (lower is better)
Translates to: HTLWSEGFRALCPGAEAGLGSGL*WLCGSP
Trigger: GGGAGATCCGCAGAGCCATCACAGGCCGGATCCCAG...TCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACCAGAGTGTGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR TCA 90 bp CGCCCACAGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTGCCCCCTCCCTATAGGCAGCCCCATTaGGCTCAGGGTGCACGACGG +
Preference number: 4 (lower is better)
Translates to: RPQDGRRQATRGPALPPPYRQPH*AQGARR
Trigger: CCGTCGTGCACCCTGAGCTCAATGGGGCTGCCTATA...GGGAGGGGGCAGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCTGTGGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR TCA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCTATAGGCAGCCCCATTaGGCTCAGGGTGCACGACGG +
Preference number: 4 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSYRQPH*AQGARR
Trigger: CCGTCGTGCACCCTGAGCTCAATGGGGCTGCCTATA...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
ENST00000504092.5
CDS-3UTR TCA 90 bp CGCCCACAGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTGCCCCCTCCCTATCCGCCTCGGGCTTaGCGGTTTGGCCAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: RPQDGRRQATRGPALPPPYPPRA*RFGQEK
Trigger: CTTCTCCTGGCCAAACCGTCAAGCCCGAGGCGGATA...GGGAGGGGGCAGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCTGTGGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR TCA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCTATCCGCCTCGGGCTTaGCGGTTTGGCCAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSYPPRA*RFGQEK
Trigger: CTTCTCCTGGCCAAACCGTCAAGCCCGAGGCGGATA...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
ENST00000504092.5
CDS-3UTR GCA 90 bp CGAGGAACGCGAAGGACACAGGGCAGAGCGCCCACAGGACGGACGACGACAAGCCCGGCCATCCAGCAATaGCACCAGGGGCCGCGGGTG +
Preference number: 4 (lower is better)
Translates to: RGTRRTQGRAPTGRTTTSPAIQQ*HQGPRV
Trigger: CACCCGCGGCCCCTGGTGGCATTGCTGGATGGCCGG...GCTTGTCGTCGTCCGTCCTGTGGGCGCTCTGCCCTGTGTCCTTCGCGTTCCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR GCA 90 bp CCCGTTCCAGAGTCATCAGCTCTTCGTCGGTGTCTGGCCCAGCCTCCTGGGGGCCCGGCCATCCAGCAATaGCACCAGGGGCCGCGGGTG +
Preference number: 4 (lower is better)
Translates to: PVPESSALRRCLAQPPGGPAIQQ*HQGPRV
Trigger: CACCCGCGGCCCCTGGTGGCATTGCTGGATGGCCGG...GCCCCCAGGAGGCTGGGCCAGACACCGACGAAGAGCTGATGACTCTGGAACGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR GCA 90 bp CGCCCACAGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTGCCCCCTCCCTGGAAGAGCAGGTCCTaGAGGGTGCTGACACGCTGC +
Preference number: 4 (lower is better)
Translates to: RPQDGRRQATRGPALPPPWKSRS*RVLTRC
Trigger: GCAGCGTGTCAGCACCCTGCAGGACCTGCTCTTCCA...GGGAGGGGGCAGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCTGTGGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR GCA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCTGGAAGAGCAGGTCCTaGAGGGTGCTGACACGCTGC +
Preference number: 4 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSWKSRS*RVLTRC
Trigger: GCAGCGTGTCAGCACCCTGCAGGACCTGCTCTTCCA...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000504092.5
CDS-3UTR GCA 90 bp GATGGCTCTGCGGATCTCCCGTGCCGCCTCCTCTCGCATCTCGATGGATGCCTGCGACGGCGGGGTCCATaGTGGCCCAGTGGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: DGSADLPCRLLSHLDGCLRRRGP*WPSGWR
Trigger: CCGCCACCCACTGGGCCAGCATGGACCCCGCCGTCG...CAGGCATCCATCGAGATGCGAGAGGAGGCGGCACGGGAGATCCGCAGAGCCATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510739.1
CDS-3UTR GCA 90 bp ATCAGCAGGACGGCACTGGTGCAGGCGGGGACGCTGCCACCCTCCACGTCCCCAGCCCGGACCAGTCTCTaGAGTGCCAGGGCCACCACA +
Preference number: 4 (lower is better)
Translates to: ISRTALVQAGTLPPSTSPARTSL*SARATT
Trigger: TGTGGTGGCCCTGGCACTGCAGAGACTGGTCCGGGC...TGGGGACGTGGAGGGTGGCAGCGTCCCCGCCTGCACCAGTGCCGTCCTGCTGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR GCA 90 bp CAGGGTCGTCGCGGGGCCGCCACGGGAGAAGGGGGCCCGAGGGAGCTGTCTGTGCCTGCTCTGTCAACGTaGTGGTGGGTTCATGGGGTG +
Preference number: 4 (lower is better)
Translates to: QGRRGAATGEGGPRELSVPALST*WWVHGV
Trigger: CACCCCATGAACCCACCAGCACGTTGACAGAGCAGG...CACAGACAGCTCCCTCGGGCCCCCTTCTCCCGTGGCGGCCCCGCGACGACCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000504784.1
CDS-3UTR CCA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCGTCACGCAGTCGCTGTaGAAGAGCAGGTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSVTQSL*KSRSCR
Trigger: CCTGCAGGACCTGCTCTTCCACAGCGACTGCGTGAC...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000504092.5
CDS-3UTR CCA 90 bp AGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTGCCCCCTCCCGCCTCCTTGCTGGCCCAGTGGGTaGCGGCTGTCAGATGGTCCT +
Preference number: 4 (lower is better)
Translates to: RTDDDKRHEAQRCPLPPPCWPSG*RLSDGP
Trigger: AGGACCATCTGACAGCCGCCACCCACTGGGCCAGCA...AGGAGGCGGGAGGGGGCAGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CCA 90 bp AGCGCCCACAGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTGCCCCCTCTGCTGGCCCAGTGGGTaGCGGCTGTCAGATGGTCCT +
Preference number: 4 (lower is better)
Translates to: SAHRTDDDKRHEAQRCPLCWPSG*RLSDGP
Trigger: AGGACCATCTGACAGCCGCCACCCACTGGGCCAGCA...GAGGGGGCAGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCTGTGGGCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CCA 90 bp CGAGGAACGCGAAGGACACAGGGCAGAGCGCCCACAGGACGGACGACGACAAGCCAGCTGGGATGCCAGTaGGGGCCACGCCCACCACGC +
Preference number: 4 (lower is better)
Translates to: RGTRRTQGRAPTGRTTTSQLGCQ*GPRPPR
Trigger: GCGTGGTGGGCGTGGCCCCCACTGGCATCCCAGCTG...GCTTGTCGTCGTCCGTCCTGTGGGCGCTCTGCCCTGTGTCCTTCGCGTTCCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CCA 90 bp CGCCCACAGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTGCCCCCTCCCCGTGGGACAGGGACATaGCGCTGGGGACGATACCTT +
Preference number: 4 (lower is better)
Translates to: RPQDGRRQATRGPALPPPRGTGT*RWGRYL
Trigger: AAGGTATCGTCCCCAGCGCCATGTCCCTGTCCCACG...GGGAGGGGGCAGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCTGTGGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CCA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCCGTGGGACAGGGACATaGCGCTGGGGACGATACCTT +
Preference number: 4 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSRGTGT*RWGRYL
Trigger: AAGGTATCGTCCCCAGCGCCATGTCCCTGTCCCACG...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
ENST00000504092.5
CDS-3UTR CCA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCAACTGGTCACTGGCGTaGTCTCTATCCGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSNWSLA*SLSASG
Trigger: GCCCGAGGCGGATAGAGACCACGCCAGTGACCAGTT...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
ENST00000504092.5
CDS-3UTR CCA 90 bp CGAGGAACGCGAAGGACACAGGGCAGAGCGCCCACAGGACGGACGACGACAAGCCCCAGGCGCCGAGGCTaGAGAGCTCCTCCCGGGCTA +
Preference number: 4 (lower is better)
Translates to: RGTRRTQGRAPTGRTTTSPRRRG*RAPPGL
Trigger: TAGCCCGGGAGGAGCTCTCCAGCCTCGGCGCCTGGG...GCTTGTCGTCGTCCGTCCTGTGGGCGCTCTGCCCTGTGTCCTTCGCGTTCCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CCA 90 bp CGTCCCCAGGACAGACGTCGATGGGCAGCGGGCACGCTGGGCACCGCCCAAGCTCTCCTCCACACACTCTaGTCCGAGGGTTTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: RPQDRRRWAAGTLGTAQALLHTL*SEGFRA
Trigger: GGCCCGGAAACCCTCGGACCAGAGTGTGTGGAGGAG...AGCTTGGGCGGTGCCCAGCGTGCCCGCTGCCCATCGACGTCTGTCCTGGGGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR TCA 90 bp ACACACTCTGGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGGGTGGTTGTGCTCGTTaGGGCCGCAGTGCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: THSGPRVSGPSAQAPRLEGGCAR*GRSAGS
Trigger: TGACCCTGCACTGCGGCCTCAACGAGCACAACCACC...CTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACCAGAGTGTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR GCA 90 bp AGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTGCCCCCTCCCGCCTCCTTGGAAGAGCAGGTCCTaGAGGGTGCTGACACGCTGC +
Preference number: 4 (lower is better)
Translates to: RTDDDKRHEAQRCPLPPPWKSRS*RVLTRC
Trigger: GCAGCGTGTCAGCACCCTGCAGGACCTGCTCTTCCA...AGGAGGCGGGAGGGGGCAGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR GCA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCGCAGATGAGGTTGGGTaGATCCTTCAGAGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSADEVG*ILQRAL
Trigger: CAGGGCCCTCTGAAGGATGCACCCAACCTCATCTGC...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
ENST00000504092.5
CDS-3UTR GCA 90 bp CTTAACGAGGAACGCGAAGGACACAGGGCAGAGCGCCCACAGGACGGACGACGACGACGGCGGGGTCCATaGTGGCCCAGTGGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: LNEEREGHRAERPQDGRRRRRGP*WPSGWR
Trigger: CCGCCACCCACTGGGCCAGCATGGACCCCGCCGTCG...TCGTCGTCCGTCCTGTGGGCGCTCTGCCCTGTGTCCTTCGCGTTCCTCGTTAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR GCA 90 bp CTCCTCCACACACTCTGGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGCCATTGAGCTCAGGGTaGACGACGGCGGGGTCCATG +
Preference number: 4 (lower is better)
Translates to: LLHTLWSEGFRALCPGAEPLSSG*TTAGSM
Trigger: CATGGACCCCGCCGTCGTGCACCCTGAGCTCAATGG...CTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACCAGAGTGTGTGGAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR GCA 90 bp CAGCCAACACCCCAGGCCAGAGTTGGCAAGGCCCGCCCGTTCCTGCAGGTTATAGCTGTGGCCCGGGCCTaGCGTGCTCCCGTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: QPTPQARVGKARPFLQVIAVARA*RAPVPP
Trigger: TGGAGGGACGGGAGCACGGCAGGCCCGGGCCACAGC...TATAACCTGCAGGAACGGGCGGGCCTTGCCAACTCTGGCCTGGGGTGTTGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR CCA 90 bp CACACACTCTGGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAATCTGCTCGACGCTCTaGACTCGTGTGCCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: HTLWSEGFRALCPGAEAGICSTL*TRVPSR
Trigger: GCGGGAGGGCACACGAGTCCAGAGCGTCGAGCAGAT...TCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACCAGAGTGTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR CCA 90 bp GCTGCCACCCTCCACGTCCCCAGGACAGACGTCGATGGGCAGCGGGCACGCTGGGTCACGCAGTCGCTGTaGAAGAGCAGGTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: AATLHVPRTDVDGQRARWVTQSL*KSRSCR
Trigger: CCTGCAGGACCTGCTCTTCCACAGCGACTGCGTGAC...CCAGCGTGCCCGCTGCCCATCGACGTCTGTCCTGGGGACGTGGAGGGTGGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR CCA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCGTTCTTCAGGCTGTCTaGGATCCGGCCTGTGATGGC +
Preference number: 4 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSVLQAV*DPACDG
Trigger: GCCATCACAGGCCGGATCCCAGACAGCCTGAAGAAC...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
ENST00000504092.5
CDS-3UTR CCA 90 bp ATTGAGCTCAGGGTGCACGACGGCGGGGTCCATGCTGGCCCAGTGGGTGGCGGCTGCTGGCCCAGTGGGTaGCGGCTGTCAGATGGTCCT +
Preference number: 4 (lower is better)
Translates to: IELRVHDGGVHAGPVGGGCWPSG*RLSDGP
Trigger: AGGACCATCTGACAGCCGCCACCCACTGGGCCAGCA...GCCGCCACCCACTGGGCCAGCATGGACCCCGCCGTCGTGCACCCTGAGCTCAAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510739.1
CDS-3UTR CCA 90 bp CTCCTCCACACACTCTGGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGTCCATGCTGGCCCAGTaGGTGGCGGCTGTCAGATGG +
Preference number: 4 (lower is better)
Translates to: LLHTLWSEGFRALCPGAESMLAQ*VAAVRW
Trigger: CCATCTGACAGCCGCCACCCACTGGGCCAGCATGGA...CTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACCAGAGTGTGTGGAGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CCA 90 bp CTGGCCAGCGAGAGGCCTGAGTACAGGCAAGTGTCCGGCCTGGCAGAGGCGCCGTCCATGCTGGCCCAGTaGGTGGCGGCTGTCAGATGG +
Preference number: 4 (lower is better)
Translates to: LASERPEYRQVSGLAEAPSMLAQ*VAAVRW
Trigger: CCATCTGACAGCCGCCACCCACTGGGCCAGCATGGA...CGGCGCCTCTGCCAGGCCGGACACTTGCCTGTACTCAGGCCTCTCGCTGGCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510739.1
CDS-3UTR CCA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCACAGGGACATGGCGCTaGGGACGATACCTTCCACAG +
Preference number: 4 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSTGTWR*GRYLPQ
Trigger: CTGTGGAAGGTATCGTCCCCAGCGCCATGTCCCTGT...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
ENST00000504092.5
CDS-3UTR CCA 90 bp AGCGCCCACAGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTGCCCCCTCCGTGGGACAGGGACATaGCGCTGGGGACGATACCTT +
Preference number: 4 (lower is better)
Translates to: SAHRTDDDKRHEAQRCPLRGTGT*RWGRYL
Trigger: AAGGTATCGTCCCCAGCGCCATGTCCCTGTCCCACG...GAGGGGGCAGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCTGTGGGCGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CCA 90 bp ATCAGCAGGACGGCACTGGTGCAGGCGGGGACGCTGCCACCCTCCACGTCCCCATCGGGCTTGACGGTTTaGCCAGGAGAAGGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: ISRTALVQAGTLPPSTSPSGLTV*PGEGAW
Trigger: CCACGCCCCTTCTCCTGGCCAAACCGTCAAGCCCGA...TGGGGACGTGGAGGGTGGCAGCGTCCCCGCCTGCACCAGTGCCGTCCTGCTGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR CCA 90 bp CTCCTCCACACACTCTGGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGTCGGGCTTGACGGTTTaGCCAGGAGAAGGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: LLHTLWSEGFRALCPGAESGLTV*PGEGAW
Trigger: CCACGCCCCTTCTCCTGGCCAAACCGTCAAGCCCGA...CTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACCAGAGTGTGTGGAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CCA 90 bp GCTGCCACCCTCCACGTCCCCAGGACAGACGTCGATGGGCAGCGGGCACGCTGGAACTGGTCACTGGCGTaGTCTCTATCCGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: AATLHVPRTDVDGQRARWNWSLA*SLSASG
Trigger: GCCCGAGGCGGATAGAGACCACGCCAGTGACCAGTT...CCAGCGTGCCCGCTGCCCATCGACGTCTGTCCTGGGGACGTGGAGGGTGGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR CCA 90 bp CGTCCCCAGGACAGACGTCGATGGGCAGCGGGCACGCTGGGCACCGCCCAAGCTAACTGGTCACTGGCGTaGTCTCTATCCGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: RPQDRRRWAAGTLGTAQANWSLA*SLSASG
Trigger: GCCCGAGGCGGATAGAGACCACGCCAGTGACCAGTT...AGCTTGGGCGGTGCCCAGCGTGCCCGCTGCCCATCGACGTCTGTCCTGGGGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR CCA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCCTCCCGGGCTACAACTaGTCACTGGCGTGGTCTCTA +
Preference number: 4 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSLPGYN*SLAWSL
Trigger: TAGAGACCACGCCAGTGACCAGTTGTAGCCCGGGAG...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
ENST00000504092.5
CDS-3UTR CCA 90 bp CGAGGAACGCGAAGGACACAGGGCAGAGCGCCCACAGGACGGACGACGACAAGCGGGCAGCGGGCACGCTaGGCACCGCCCAAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: RGTRRTQGRAPTGRTTTSGQRAR*APPKLF
Trigger: GAAAAGCTTGGGCGGTGCCCAGCGTGCCCGCTGCCC...GCTTGTCGTCGTCCGTCCTGTGGGCGCTCTGCCCTGTGTCCTTCGCGTTCCTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR CCA 90 bp GACCGCCCGTGTGAAGACCGCCGCGCAACTGGGGCCGGGGGAAGCACCTTACTCTGGGTGCCGATCGTGTaGCGCGTCAGAGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: DRPCEDRRATGAGGSTLLWVPIV*RVRVQV
Trigger: GACCTGGACTCTGACGCGCCACACGATCGGCACCCA...GAGTAAGGTGCTTCCCCCGGCCCCAGTTGCGCGGCGGTCTTCACACGGGCGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR TCA 90 bp ACACACTCTGGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGTATAGGCAGCCCCATTaGGCTCAGGGTGCACGACGG +
Preference number: 4 (lower is better)
Translates to: THSGPRVSGPSAQAPRLEYRQPH*AQGARR
Trigger: CCGTCGTGCACCCTGAGCTCAATGGGGCTGCCTATA...CTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACCAGAGTGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR TCA 90 bp ACACACTCTGGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGTATCCGCCTCGGGCTTaGCGGTTTGGCCAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: THSGPRVSGPSAQAPRLEYPPRA*RFGQEK
Trigger: CTTCTCCTGGCCAAACCGTCAAGCCCGAGGCGGATA...CTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACCAGAGTGTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR TCA 90 bp CCTCCTCCACACACTCTGGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGATATCCGCCTCGGGCTTaGCGGTTTGGCCAGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PPPHTLVRGFPGPLPRRRYPPRA*RFGQEK
Trigger: CTTCTCCTGGCCAAACCGTCAAGCCCGAGGCGGATA...TCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACCAGAGTGTGTGGAGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR GCA 90 bp TTGCTAGCCTACCACATCAGCAGGACGGCACTGGTGCAGGCGGGGACGCTGCCACGCTCTGGACTCGTGTaGCCTCCCGCAGCGCCTGGT +
Preference number: 4 (lower is better)
Translates to: LLAYHISRTALVQAGTLPRSGLV*PPAAPG
Trigger: ACCAGGCGCTGCGGGAGGGCACACGAGTCCAGAGCG...TGGCAGCGTCCCCGCCTGCACCAGTGCCGTCCTGCTGATGTGGTAGGCTAGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR GCA 90 bp CGAGGAACGCGAAGGACACAGGGCAGAGCGCCCACAGGACGGACGACGACAAGCAAGGGTTCCGACTCGTaGACATCCAGGGCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: RGTRRTQGRAPTGRTTTSKGSDS*TSRAAP
Trigger: CGGCGCGGCCCTGGATGTGCACGAGTCGGAACCCTT...GCTTGTCGTCGTCCGTCCTGTGGGCGCTCTGCCCTGTGTCCTTCGCGTTCCTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR GCA 90 bp CCACTGCTGGCCAGCGAGAGGCCTGAGTACAGGCAAGTGTCCGGCCTGGCAGAGAAGGGTTCCGACTCGTaGACATCCAGGGCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: PLLASERPEYRQVSGLAEKGSDS*TSRAAP
Trigger: CGGCGCGGCCCTGGATGTGCACGAGTCGGAACCCTT...CTCTGCCAGGCCGGACACTTGCCTGTACTCAGGCCTCTCGCTGGCCAGCAGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510739.1
CDS-3UTR GCA 90 bp CGTCCCCAGGACAGACGTCGATGGGCAGCGGGCACGCTGGGCACCGCCCAAGCTGCAGATGAGGTTGGGTaGATCCTTCAGAGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: RPQDRRRWAAGTLGTAQAADEVG*ILQRAL
Trigger: CAGGGCCCTCTGAAGGATGCACCCAACCTCATCTGC...AGCTTGGGCGGTGCCCAGCGTGCCCGCTGCCCATCGACGTCTGTCCTGGGGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR GCA 90 bp CGCCCACAGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTGCCCCCTCCCTCGCATCTCGATGGATaGCTGCTCGCTGTACCATGC +
Preference number: 4 (lower is better)
Translates to: RPQDGRRQATRGPALPPPSHLDG*LLAVPC
Trigger: GCATGGTACAGCGAGCAGGCATCCATCGAGATGCGA...GGGAGGGGGCAGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCTGTGGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR GCA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCTCGCATCTCGATGGATaGCTGCTCGCTGTACCATGC +
Preference number: 4 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSSHLDG*LLAVPC
Trigger: GCATGGTACAGCGAGCAGGCATCCATCGAGATGCGA...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
ENST00000504092.5
CDS-3UTR GCA 90 bp CTCCTCCACACACTCTGGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGGGCCACCACACAGATaGCTCCTCCACACACTCTGG +
Preference number: 4 (lower is better)
Translates to: LLHTLWSEGFRALCPGAEGPPHR*LLHTLW
Trigger: CCAGAGTGTGTGGAGGAGGCATCTGTGTGGTGGCCC...CTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACCAGAGTGTGTGGAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR GCA 90 bp CGTGATCCCACCTCGGCACAGCTGGGGAAGGCCCTCTGCTCTAGGAAGCGGGACCTGGGGAAGGCCCTCTaGTCTAGGAAGCGGGACCCG +
Preference number: 4 (lower is better)
Translates to: RDPTSAQLGKALCSRKRDLGKAL*SRKRDP
Trigger: CGGGTCCCGCTTCCTAGAGCAGAGGGCCTTCCCCAG...GTCCCGCTTCCTAGAGCAGAGGGCCTTCCCCAGCTGTGCCGAGGTGGGATCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504784.1
CDS-3UTR GCA 90 bp GACGGCGGGGTCCATGCTGGCCCAGTGGGTGGCGGCTGTCAGATGGTCCTTGTTGGCAAACTCCCCCACTaGTGGCCAGCGAGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: DGGVHAGPVGGGCQMVLVGKLPH*WPARGL
Trigger: CAGGCCTCTCGCTGGCCAGCAGTGGGGGAGTTTGCC...AACAAGGACCATCTGACAGCCGCCACCCACTGGGCCAGCATGGACCCCGCCGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510739.1
CDS-3UTR CCA 90 bp CTCCTCCACACACTCTGGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGTCACGCAGTCGCTGTaGAAGAGCAGGTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LLHTLWSEGFRALCPGAEVTQSL*KSRSCR
Trigger: CCTGCAGGACCTGCTCTTCCACAGCGACTGCGTGAC...CTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACCAGAGTGTGTGGAGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR CCA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCCTGTACCATGCAGCATaGGGGGTGCAGATGAGGTTG +
Preference number: 4 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSLYHAA*GVQMRL
Trigger: CAACCTCATCTGCACCCCCCATGCTGCATGGTACAG...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
ENST00000504092.5
CDS-3UTR CCA 90 bp TTCTGCTTAACGAGGAACGCGAAGGACACAGGGCAGAGCGCCCACAGGACGGACCGGCGGGGTCCATGCTaGCCCAGTGGGTGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: FCLTRNAKDTGQSAHRTDRRGPC*PSGWRL
Trigger: CAGCCGCCACCCACTGGGCCAGCATGGACCCCGCCG...GTCCGTCCTGTGGGCGCTCTGCCCTGTGTCCTTCGCGTTCCTCGTTAAGCAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CCA 90 bp AGCGCCCACAGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTGCCCCCTCACAGGGACATGGCGCTaGGGACGATACCTTCCACAG +
Preference number: 4 (lower is better)
Translates to: SAHRTDDDKRHEAQRCPLTGTWR*GRYLPQ
Trigger: CTGTGGAAGGTATCGTCCCCAGCGCCATGTCCCTGT...GAGGGGGCAGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCTGTGGGCGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CCA 90 bp CAGGGCAGAGCGCCCACAGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTAACTGGTCACTGGCGTaGTCTCTATCCGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: QGRAPTGRTTTSDTRPSANWSLA*SLSASG
Trigger: GCCCGAGGCGGATAGAGACCACGCCAGTGACCAGTT...AGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCTGTGGGCGCTCTGCCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CCA 90 bp CGCCCACAGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTGCCCCCTCCCGCTACAACTGGTCACTaGCGTGGTCTCTATCCGCCT +
Preference number: 4 (lower is better)
Translates to: RPQDGRRQATRGPALPPPATTGH*RGLYPP
Trigger: AGGCGGATAGAGACCACGCCAGTGACCAGTTGTAGC...GGGAGGGGGCAGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCTGTGGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CCA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCGCTACAACTGGTCACTaGCGTGGTCTCTATCCGCCT +
Preference number: 4 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSATTGH*RGLYPP
Trigger: AGGCGGATAGAGACCACGCCAGTGACCAGTTGTAGC...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
ENST00000504092.5
CDS-3UTR CCA 90 bp AGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTGCCCCCTCCCGCCTCCTCTCCCGGGCTACAACTaGTCACTGGCGTGGTCTCTA +
Preference number: 4 (lower is better)
Translates to: RTDDDKRHEAQRCPLPPPLPGYN*SLAWSL
Trigger: TAGAGACCACGCCAGTGACCAGTTGTAGCCCGGGAG...AGGAGGCGGGAGGGGGCAGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CCA 90 bp GATGGCTCTGCGGATCTCCCGTGCCGCCTCCTCTCGCATCTCGATGGATGCCTGGGCAAGTGTCCGGCCTaGCAGAGGCGCCGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: DGSADLPCRLLSHLDGCLGKCPA*QRRRLE
Trigger: CTCCAGACGGCGCCTCTGCCAGGCCGGACACTTGCC...CAGGCATCCATCGAGATGCGAGAGGAGGCGGCACGGGAGATCCGCAGAGCCATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510739.1
CDS-3UTR TCA 90 bp GACGGCGGGGTCCATGCTGGCCCAGTGGGTGGCGGCTGTCAGATGGTCCTTGTTGGTGGTTGTGCTCGTTaGGGCCGCAGTGCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: DGGVHAGPVGGGCQMVLVGGCAR*GRSAGS
Trigger: TGACCCTGCACTGCGGCCTCAACGAGCACAACCACC...AACAAGGACCATCTGACAGCCGCCACCCACTGGGCCAGCATGGACCCCGCCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510739.1
CDS-3UTR TCA 90 bp GTTGGGTGCATCCTTCAGAGGGCCCTGGCTAAAGCCCGCAGCGGGCGGCAAACTCTGGGATCCGGCCTGTaGTGGCTCTGCGGATCTCCC +
Preference number: 4 (lower is better)
Translates to: VGCILQRALAKARSGRQTLGSGL*WLCGSP
Trigger: GGGAGATCCGCAGAGCCATCACAGGCCGGATCCCAG...AGTTTGCCGCCCGCTGCGGGCTTTAGCCAGGGCCCTCTGAAGGATGCACCCAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510739.1
CDS-3UTR TCA 90 bp CCACGTGACGTGCCAACGTGCCCATGTGCCGATTCCAGACACCGGCCTGCCGGCACCCGAGGCCTCGGCTaGCGCTGTCTTCCTCTAAAG +
Preference number: 4 (lower is better)
Translates to: PRDVPTCPCADSRHRPAGTRGLG*RCLPLK
Trigger: CTTTAGAGGAAGACAGCGTCAGCCGAGGCCTCGGGT...GCCGGCAGGCCGGTGTCTGGAATCGGCACATGGGCACGTTGGCACGTCACGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR TCA 90 bp ATGGCTCTGCGGATCTCCCGTGCCGCCTCCTCTCGCATCTCGATGGATGCCTGCGGCCAGCGAGAGGCCTaGGTACAGGCAAGTGTCCGG +
Preference number: 4 (lower is better)
Translates to: MALRISRAASSRISMDACGQREA*VQASVR
Trigger: CCGGACACTTGCCTGTACTCAGGCCTCTCGCTGGCC...GCAGGCATCCATCGAGATGCGAGAGGAGGCGGCACGGGAGATCCGCAGAGCCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510739.1
CDS-3UTR TCA 90 bp CCACGTGACGTGCCAACGTGCCCATGTGCCGATTCCAGACACCGGCCTGCCGGCGTTCATGCCTGTTGCTaGGGAGGACACCGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: PRDVPTCPCADSRHRPAGVHACC*GGHRGR
Trigger: CCTCCCTCGGTGTCCTCCTCAGCAACAGGCATGAAC...GCCGGCAGGCCGGTGTCTGGAATCGGCACATGGGCACGTTGGCACGTCACGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR GCA 90 bp CCTCCTCCACACACTCTGGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGACCCTTGTTGAGCAAGTaGGAGCTGCCCATCGAGAGG +
Preference number: 4 (lower is better)
Translates to: PPPHTLVRGFPGPLPRRRPLLSK*ELPIER
Trigger: CCTCTCGATGGGCAGCTCGCACTTGCTCAACAAGGG...TCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACCAGAGTGTGTGGAGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR GCA 90 bp ATCAGCAGGACGGCACTGGTGCAGGCGGGGACGCTGCCACCCTCCACGTCCCCAACGCCGCGGGCACGTTaGAGACGGCAATGCCTAAAT +
Preference number: 4 (lower is better)
Translates to: ISRTALVQAGTLPPSTSPTPRAR*RRQCLN
Trigger: ATTTAGGCATTGCCGTCTGCAACGTGCCCGCGGCGT...TGGGGACGTGGAGGGTGGCAGCGTCCCCGCCTGCACCAGTGCCGTCCTGCTGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR GCA 90 bp TTCAGAGGGCCCTGGCTAAAGCCCGCAGCGGGCGGCAAACTCCCCCACTGCTGGTGGAAGAGCAGGTCCTaGAGGGTGCTGACACGCTGC +
Preference number: 4 (lower is better)
Translates to: FRGPWLKPAAGGKLPHCWWKSRS*RVLTRC
Trigger: GCAGCGTGTCAGCACCCTGCAGGACCTGCTCTTCCA...CCAGCAGTGGGGGAGTTTGCCGCCCGCTGCGGGCTTTAGCCAGGGCCCTCTGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510739.1
CDS-3UTR GCA 90 bp CCACTGCTGGCCAGCGAGAGGCCTGAGTACAGGCAAGTGTCCGGCCTGGCAGAGTCGTTGAGGCCGCAGTaGAGGGTCACGCAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: PLLASERPEYRQVSGLAESLRPQ*RVTQSL
Trigger: CAGCGACTGCGTGACCCTGCACTGCGGCCTCAACGA...CTCTGCCAGGCCGGACACTTGCCTGTACTCAGGCCTCTCGCTGGCCAGCAGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510739.1
CDS-3UTR GCA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCATCTCGATGGATGCCTaGTCGCTGTACCATGCAGCA +
Preference number: 4 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSISMDA*SLYHAA
Trigger: TGCTGCATGGTACAGCGAGCAGGCATCCATCGAGAT...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
ENST00000504092.5
CDS-3UTR GCA 90 bp GCAGAGCGCCCACAGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTGCCCTCGCATCTCGATGGATaGCTGCTCGCTGTACCATGC +
Preference number: 4 (lower is better)
Translates to: AERPQDGRRQATRGPALPSHLDG*LLAVPC
Trigger: GCATGGTACAGCGAGCAGGCATCCATCGAGATGCGA...GGGCAGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCTGTGGGCGCTCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR GCA 90 bp ACACACTCTGGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGGACCAGTCTCTGCAGTaGCAGGGCCACCACACAGAT +
Preference number: 4 (lower is better)
Translates to: THSGPRVSGPSAQAPRLEDQSLQ*QGHHTD
Trigger: ATCTGTGTGGTGGCCCTGGCACTGCAGAGACTGGTC...CTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACCAGAGTGTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR GCA 90 bp CAAACCGAGCTGGTGCCACACAACTCCCTCAGGTGTGCACCACGGGCAGTTCACACCCTGAGGTTGCAGTaGCAGGCCCGAGGCCGCGCC +
Preference number: 4 (lower is better)
Translates to: QTELVPHNSLRCAPRAVHTLRLQ*QARGRA
Trigger: GGCGCGGCCTCGGGCCTGGCACTGCAACCTCAGGGT...GTGAACTGCCCGTGGTGCACACCTGAGGGAGTTGTGTGGCACCAGCTCGGTTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR GCA 90 bp CCACGTGACGTGCCAACGTGCCCATGTGCCGATTCCAGACACCGGCCTGCCGGCGGACCTCACTGCATCTaGCACACCCGGGACTGCTGT +
Preference number: 4 (lower is better)
Translates to: PRDVPTCPCADSRHRPAGGPHCI*HTRDCC
Trigger: ACAGCAGTCCCGGGTGTGGCAGATGCAGTGAGGTCC...GCCGGCAGGCCGGTGTCTGGAATCGGCACATGGGCACGTTGGCACGTCACGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR GCA 90 bp CAGCCAACACCCCAGGCCAGAGTTGGCAAGGCCCGCCCGTTCCTGCAGGTTATACCCAACGTGCGGTTCTaGCAGCCCCAGGCGACCACG +
Preference number: 4 (lower is better)
Translates to: QPTPQARVGKARPFLQVIPNVRF*QPQATT
Trigger: CGTGGTCGCCTGGGGCTGGCAGAACCGCACGTTGGG...TATAACCTGCAGGAACGGGCGGGCCTTGCCAACTCTGGCCTGGGGTGTTGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR GCA 90 bp CCACGTGACGTGCCAACGTGCCCATGTGCCGATTCCAGACACCGGCCTGCCGGCGCATGCGTGTGGACATaGCCACGTGACGTGCCAACG +
Preference number: 4 (lower is better)
Translates to: PRDVPTCPCADSRHRPAGACVWT*PRDVPT
Trigger: CGTTGGCACGTCACGTGGGCATGTCCACACGCATGC...GCCGGCAGGCCGGTGTCTGGAATCGGCACATGGGCACGTTGGCACGTCACGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR CCA 90 bp CTCCTCCACACACTCTGGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGTACAGGTTCAGGATGTaGCACAGCGTCGAGTCGGCC +
Preference number: 4 (lower is better)
Translates to: LLHTLWSEGFRALCPGAEYRFRM*HSVESA
Trigger: GGCCGACTCGACGCTGTGCCACATCCTGAACCTGTA...CTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACCAGAGTGTGTGGAGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR CCA 90 bp ACACACTCTGGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGGTTCTTCAGGCTGTCTaGGATCCGGCCTGTGATGGC +
Preference number: 4 (lower is better)
Translates to: THSGPRVSGPSAQAPRLEVLQAV*DPACDG
Trigger: GCCATCACAGGCCGGATCCCAGACAGCCTGAAGAAC...CTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACCAGAGTGTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CCA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCGTGGCGGCTGTCAGATaGTCCTTGTTGACACAGTTC +
Preference number: 4 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSVAAVR*SLLTQF
Trigger: GAACTGTGTCAACAAGGACCATCTGACAGCCGCCAC...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
ENST00000504092.5
CDS-3UTR CCA 90 bp ACACACTCTGGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGACAGGGACATGGCGCTaGGGACGATACCTTCCACAG +
Preference number: 4 (lower is better)
Translates to: THSGPRVSGPSAQAPRLETGTWR*GRYLPQ
Trigger: CTGTGGAAGGTATCGTCCCCAGCGCCATGTCCCTGT...CTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACCAGAGTGTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CCA 90 bp CCTCCTCCACACACTCTGGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAACAGGGACATGGCGCTaGGGACGATACCTTCCACAG +
Preference number: 4 (lower is better)
Translates to: PPPHTLVRGFPGPLPRRRTGTWR*GRYLPQ
Trigger: CTGTGGAAGGTATCGTCCCCAGCGCCATGTCCCTGT...TCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACCAGAGTGTGTGGAGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CCA 90 bp GCAGAGCGCCCACAGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTGCCCGCTACAACTGGTCACTaGCGTGGTCTCTATCCGCCT +
Preference number: 4 (lower is better)
Translates to: AERPQDGRRQATRGPALPATTGH*RGLYPP
Trigger: AGGCGGATAGAGACCACGCCAGTGACCAGTTGTAGC...GGGCAGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCTGTGGGCGCTCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CCA 90 bp TTCTGCTTAACGAGGAACGCGAAGGACACAGGGCAGAGCGCCCACAGGACGGACCCCAGGCGCCGAGGCTaGAGAGCTCCTCCCGGGCTA +
Preference number: 4 (lower is better)
Translates to: FCLTRNAKDTGQSAHRTDPRRRG*RAPPGL
Trigger: TAGCCCGGGAGGAGCTCTCCAGCCTCGGCGCCTGGG...GTCCGTCCTGTGGGCGCTCTGCCCTGTGTCCTTCGCGTTCCTCGTTAAGCAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CCA 90 bp CCTGGTCAGCTGGTAAACCCGCCCCTCAGTTCCACCGATCAGCTTCGCCGTTTTGAGGCCGCGCCCCTGTaGCCCCGAGGCCTACTCCTG +
Preference number: 4 (lower is better)
Translates to: PGQLVNPPLSSTDQLRRFEAAPL*PRGLLL
Trigger: CAGGAGTAGGCCTCGGGGCCACAGGGGCGCGGCCTC...AAAACGGCGAAGCTGATCGGTGGAACTGAGGGGCGGGTTTACCAGCTGACCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR CCA 90 bp GACCGCCCGTGTGAAGACCGCCGCGCAACTGGGGCCGGGGGAAGCACCTTACTCCCCCAGGCGACCACGTaGTGGTACCTTCTCATGGAT +
Preference number: 4 (lower is better)
Translates to: DRPCEDRRATGAGGSTLLPQATT*WYLLMD
Trigger: ATCCATGAGAAGGTACCACCACGTGGTCGCCTGGGG...GAGTAAGGTGCTTCCCCCGGCCCCAGTTGCGCGGCGGTCTTCACACGGGCGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR CCA 90 bp CCCGTTCCAGAGTCATCAGCTCTTCGTCGGTGTCTGGCCCAGCCTCCTGGGGGCGGACACCGAGGGAGGTaGCCAGCATTTGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: PVPESSALRRCLAQPPGGGHRGR*PAFAWP
Trigger: TGGCCAGGCAAATGCTGGCCACCTCCCTCGGTGTCC...GCCCCCAGGAGGCTGGGCCAGACACCGACGAAGAGCTGATGACTCTGGAACGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR TCA 90 bp CGAGGAACGCGAAGGACACAGGGCAGAGCGCCCACAGGACGGACGACGACAAGCCGTAGAAGAGCACGTTaGAGCCGAAGGCCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: RGTRRTQGRAPTGRTTTSRRRAR*SRRPWP
Trigger: GGGCCAAGGCCTTCGGCTTCAACGTGCTCTTCTACG...GCTTGTCGTCGTCCGTCCTGTGGGCGCTCTGCCCTGTGTCCTTCGCGTTCCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR TCA 90 bp CACTGCTGGCCAGCGAGAGGCCTGAGTACAGGCAAGTGTCCGGCCTGGCAGAGGCGTAGAAGAGCACGTTaGAGCCGAAGGCCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: HCWPARGLSTGKCPAWQRRRRAR*SRRPWP
Trigger: GGGCCAAGGCCTTCGGCTTCAACGTGCTCTTCTACG...CCTCTGCCAGGCCGGACACTTGCCTGTACTCAGGCCTCTCGCTGGCCAGCAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510739.1
CDS-3UTR TCA 90 bp CTTAACGAGGAACGCGAAGGACACAGGGCAGAGCGCCCACAGGACGGACGACGACTGGGATCCGGCCTGTaGTGGCTCTGCGGATCTCCC +
Preference number: 4 (lower is better)
Translates to: LNEEREGHRAERPQDGRRLGSGL*WLCGSP
Trigger: GGGAGATCCGCAGAGCCATCACAGGCCGGATCCCAG...TCGTCGTCCGTCCTGTGGGCGCTCTGCCCTGTGTCCTTCGCGTTCCTCGTTAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR GCA 90 bp AGCGCCCACAGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTGCCCCCTCATCTCGATGGATGCCTaGTCGCTGTACCATGCAGCA +
Preference number: 4 (lower is better)
Translates to: SAHRTDDDKRHEAQRCPLISMDA*SLYHAA
Trigger: TGCTGCATGGTACAGCGAGCAGGCATCCATCGAGAT...GAGGGGGCAGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCTGTGGGCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR GCA 90 bp GCAGATGAGGTTGGGTGCATCCTTCAGAGGGCCCTGGCTAAAGCCCGCAGCGGGTCTGCGGATCTCCCGTaGCGCCTCCTCTCGCATCTC +
Preference number: 4 (lower is better)
Translates to: ADEVGCILQRALAKARSGSADLP*RLLSHL
Trigger: GAGATGCGAGAGGAGGCGGCACGGGAGATCCGCAGA...CCCGCTGCGGGCTTTAGCCAGGGCCCTCTGAAGGATGCACCCAACCTCATCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510739.1
CDS-3UTR GCA 90 bp CCCGTTCCAGAGTCATCAGCTCTTCGTCGGTGTCTGGCCCAGCCTCCTGGGGGCAGGGCACAGGGTGTGTaGTGTGGGCAGGGAAACTGC +
Preference number: 4 (lower is better)
Translates to: PVPESSALRRCLAQPPGGRAQGV*CGQGNC
Trigger: GCAGTTTCCCTGCCCACAGCACACACCCTGTGCCCT...GCCCCCAGGAGGCTGGGCCAGACACCGACGAAGAGCTGATGACTCTGGAACGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR GCA 90 bp GACCGCCCGTGTGAAGACCGCCGCGCAACTGGGGCCGGGGGAAGCACCTTACTCTCCAAACCGAGCTGGTaGCACACAACTCCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: DRPCEDRRATGAGGSTLLSKPSW*HTTPSG
Trigger: ACCTGAGGGAGTTGTGTGGCACCAGCTCGGTTTGGA...GAGTAAGGTGCTTCCCCCGGCCCCAGTTGCGCGGCGGTCTTCACACGGGCGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR CCA 90 bp CCACTGCTGGCCAGCGAGAGGCCTGAGTACAGGCAAGTGTCCGGCCTGGCAGAGGTCACGCAGTCGCTGTaGAAGAGCAGGTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PLLASERPEYRQVSGLAEVTQSL*KSRSCR
Trigger: CCTGCAGGACCTGCTCTTCCACAGCGACTGCGTGAC...CTCTGCCAGGCCGGACACTTGCCTGTACTCAGGCCTCTCGCTGGCCAGCAGTGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510739.1
CDS-3UTR CCA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCAAGTCGTTGATGAGGTaGTGGTTGTGCTCGTTGAGG +
Preference number: 4 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSKSLMR*WLCSLR
Trigger: CCTCAACGAGCACAACCACCACCTCATCAACGACTT...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000504092.5
CDS-3UTR CCA 90 bp GCGAGAGGCCTGAGTACAGGCAAGTGTCCGGCCTGGCAGAGGCGCCGTCTGGAGGTTCTTCAGGCTGTCTaGGATCCGGCCTGTGATGGC +
Preference number: 4 (lower is better)
Translates to: ARGLSTGKCPAWQRRRLEVLQAV*DPACDG
Trigger: GCCATCACAGGCCGGATCCCAGACAGCCTGAAGAAC...CTCCAGACGGCGCCTCTGCCAGGCCGGACACTTGCCTGTACTCAGGCCTCTCGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510739.1
CDS-3UTR CCA 90 bp AGCGCCCACAGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTGCCCCCTCGTGGCGGCTGTCAGATaGTCCTTGTTGACACAGTTC +
Preference number: 4 (lower is better)
Translates to: SAHRTDDDKRHEAQRCPLVAAVR*SLLTQF
Trigger: GAACTGTGTCAACAAGGACCATCTGACAGCCGCCAC...GAGGGGGCAGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCTGTGGGCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CCA 90 bp GCTCAGGGTGCACGACGGCGGGGTCCATGCTGGCCCAGTGGGTGGCGGCTGTCAGTGGCGGCTGTCAGATaGTCCTTGTTGACACAGTTC +
Preference number: 4 (lower is better)
Translates to: AQGARRRGPCWPSGWRLSVAAVR*SLLTQF
Trigger: GAACTGTGTCAACAAGGACCATCTGACAGCCGCCAC...TGACAGCCGCCACCCACTGGGCCAGCATGGACCCCGCCGTCGTGCACCCTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510739.1
CDS-3UTR CCA 90 bp CGAGGAACGCGAAGGACACAGGGCAGAGCGCCCACAGGACGGACGACGACAAGCCGTGGGACAGGGACATaGCGCTGGGGACGATACCTT +
Preference number: 4 (lower is better)
Translates to: RGTRRTQGRAPTGRTTTSRGTGT*RWGRYL
Trigger: AAGGTATCGTCCCCAGCGCCATGTCCCTGTCCCACG...GCTTGTCGTCGTCCGTCCTGTGGGCGCTCTGCCCTGTGTCCTTCGCGTTCCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CCA 90 bp TTCTGCTTAACGAGGAACGCGAAGGACACAGGGCAGAGCGCCCACAGGACGGACGGGCAGCGGGCACGCTaGGCACCGCCCAAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: FCLTRNAKDTGQSAHRTDGQRAR*APPKLF
Trigger: GAAAAGCTTGGGCGGTGCCCAGCGTGCCCGCTGCCC...GTCCGTCCTGTGGGCGCTCTGCCCTGTGTCCTTCGCGTTCCTCGTTAAGCAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR CCA 90 bp CCACTGCTGGCCAGCGAGAGGCCTGAGTACAGGCAAGTGTCCGGCCTGGCAGAGAAACTCCCCCACTGCTaGCCAGCGAGAGGCCTGAGT +
Preference number: 4 (lower is better)
Translates to: PLLASERPEYRQVSGLAEKLPHC*PARGLS
Trigger: ACTCAGGCCTCTCGCTGGCCAGCAGTGGGGGAGTTT...CTCTGCCAGGCCGGACACTTGCCTGTACTCAGGCCTCTCGCTGGCCAGCAGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510739.1
CDS-3UTR CCA 90 bp TCCAAACCGAGCTGGTGCCACACAACTCCCTCAGGTGTGCACCACGGGCAGTTCACGGCGCGGGACGACTaGGACAGAGGCTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SKPSWCHTTPSGVHHGQFTARDD*DRGCSC
Trigger: GCAGGAGCAGCCTCTGTCCCAGTCGTCCCGCGCCGT...GAACTGCCCGTGGTGCACACCTGAGGGAGTTGTGTGGCACCAGCTCGGTTTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR CCA 90 bp CAGCCAACACCCCAGGCCAGAGTTGGCAAGGCCCGCCCGTTCCTGCAGGTTATACTGTCCGCTGCCGCCTaGTCAGCTGGTAAACCCGCC +
Preference number: 4 (lower is better)
Translates to: QPTPQARVGKARPFLQVILSAAA*SAGKPA
Trigger: GGCGGGTTTACCAGCTGACCAGGCGGCAGCGGACAG...TATAACCTGCAGGAACGGGCGGGCCTTGCCAACTCTGGCCTGGGGTGTTGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR CAA 72 bp GTTGCTGAGGAGGACACCGAGGGAGGTGGCCAGCATTaGCCTGGCCACTCACCCACTGAAGGACAGCCGGTG +
Preference number: 4 (lower is better)
Translates to: VAEEDTEGGGQH*PGHSPTEGQPV
Trigger: CACCGGCTGTCCTTCAGTGGGTGAGTGGCCAGGCAAATGCTGGCCACCTCCCTCGGTGTCCTCCTCAGCAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR CAA 72 bp ACCCAGGGTGTGGCAGGGACCCAGCGTTCATGCCTGTaGCTGAGGAGGACACCGAGGGAGGTGGCCAGCATT +
Preference number: 4 (lower is better)
Translates to: TQGVAGTQRSCL*LRRTPREVASI
Trigger: AATGCTGGCCACCTCCCTCGGTGTCCTCCTCAGCAACAGGCATGAACGCTGGGTCCCTGCCACACCCTGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR TCA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCTCAGATGGTCCTTGTTaGCACAGTTCTTCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSSDGPC*HSSSGC
Trigger: ACAGCCTGAAGAACTGTGTCAACAAGGACCATCTGA...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
ENST00000504092.5
CDS-3UTR TCA 90 bp GATGGCTCTGCGGATCTCCCGTGCCGCCTCCTCTCGCATCTCGATGGATGCCTGTATAGGCAGCCCCATTaGGCTCAGGGTGCACGACGG +
Preference number: 4 (lower is better)
Translates to: DGSADLPCRLLSHLDGCLYRQPH*AQGARR
Trigger: CCGTCGTGCACCCTGAGCTCAATGGGGCTGCCTATA...CAGGCATCCATCGAGATGCGAGAGGAGGCGGCACGGGAGATCCGCAGAGCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510739.1
CDS-3UTR TCA 90 bp AGCCCCTTGCATGCGTGTGGACATGCCCACGTGACGTGCCAACGTGCCCATGTGGTGGACATGCCCACGTaGCGTGCCAACGTGCCCATG +
Preference number: 4 (lower is better)
Translates to: SPLHACGHAHVTCQRAHVVDMPT*RANVPM
Trigger: CATGGGCACGTTGGCACGTCACGTGGGCATGTCCAC...CACATGGGCACGTTGGCACGTCACGTGGGCATGTCCACACGCATGCAAGGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR GCA 90 bp TTAACGAGGAACGCGAAGGACACAGGGCAGAGCGCCCACAGGACGGACGACGACTCGTTGAGGCCGCAGTaGAGGGTCACGCAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: LTRNAKDTGQSAHRTDDDSLRPQ*RVTQSL
Trigger: CAGCGACTGCGTGACCCTGCACTGCGGCCTCAACGA...GTCGTCGTCCGTCCTGTGGGCGCTCTGCCCTGTGTCCTTCGCGTTCCTCGTTAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR GCA 90 bp TTCTGCTTAACGAGGAACGCGAAGGACACAGGGCAGAGCGCCCACAGGACGGACGCCCGGACCAGTCTCTaGAGTGCCAGGGCCACCACA +
Preference number: 4 (lower is better)
Translates to: FCLTRNAKDTGQSAHRTDARTSL*SARATT
Trigger: TGTGGTGGCCCTGGCACTGCAGAGACTGGTCCGGGC...GTCCGTCCTGTGGGCGCTCTGCCCTGTGTCCTTCGCGTTCCTCGTTAAGCAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR GCA 90 bp GGCCCGAGGGAGCTGTCTGTGTGCAGGAGCCTGCTCTGTCAACGTGCTGGTGGGCTGTGTGCAGGAGCCTaGTCTGTCAACGTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: GPRELSVCRSLLCQRAGGLCAGA*SVNVLV
Trigger: CACCAGCACGTTGACAGAGCAGGCTCCTGCACACAG...CCCACCAGCACGTTGACAGAGCAGGCTCCTGCACACAGACAGCTCCCTCGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504784.1
CDS-3UTR GCA 90 bp TGGCACTGCTTCCCTGGCTTCTGCGTTTTGCGCATCTCCTTGACTGCCTGGTTAAGGGGCCCCGGCTCCTaGCGCACACACGAAGGGCGC +
Preference number: 4 (lower is better)
Translates to: WHCFPGFCVLRISLTAWLRGPGS*RTHEGR
Trigger: GCGCCCTTCGTGTGTGCGGCAGGAGCCGGGGCCCCT...TAACCAGGCAGTCAAGGAGATGCGCAAAACGCAGAAGCCAGGGAAGCAGTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR GCA 90 bp CCCGTTCCAGAGTCATCAGCTCTTCGTCGGTGTCTGGCCCAGCCTCCTGGGGGCAGAAGTGGACCTCACTaGATCTGCCACACCCGGGAC +
Preference number: 4 (lower is better)
Translates to: PVPESSALRRCLAQPPGGRSGPH*ICHTRD
Trigger: GTCCCGGGTGTGGCAGATGCAGTGAGGTCCACTTCT...GCCCCCAGGAGGCTGGGCCAGACACCGACGAAGAGCTGATGACTCTGGAACGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR CCA 90 bp CGAGGAACGCGAAGGACACAGGGCAGAGCGCCCACAGGACGGACGACGACAAGCGTTCTTCAGGCTGTCTaGGATCCGGCCTGTGATGGC +
Preference number: 4 (lower is better)
Translates to: RGTRRTQGRAPTGRTTTSVLQAV*DPACDG
Trigger: GCCATCACAGGCCGGATCCCAGACAGCCTGAAGAAC...GCTTGTCGTCGTCCGTCCTGTGGGCGCTCTGCCCTGTGTCCTTCGCGTTCCTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CCA 90 bp CAGGGCAGAGCGCCCACAGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTGTGGCGGCTGTCAGATaGTCCTTGTTGACACAGTTC +
Preference number: 4 (lower is better)
Translates to: QGRAPTGRTTTSDTRPSAVAAVR*SLLTQF
Trigger: GAACTGTGTCAACAAGGACCATCTGACAGCCGCCAC...AGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCTGTGGGCGCTCTGCCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CCA 90 bp CCTGGTCAGCTGGTAAACCCGCCCCTCAGTTCCACCGATCAGCTTCGCCGTTTTCTTTTGCCAGGCACCTaGGGCCGGCAGTGCGGGGTC +
Preference number: 4 (lower is better)
Translates to: PGQLVNPPLSSTDQLRRFLLPGT*GRQCGV
Trigger: GACCCCGCACTGCCGGCCCCAGGTGCCTGGCAAAAG...AAAACGGCGAAGCTGATCGGTGGAACTGAGGGGCGGGTTTACCAGCTGACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR CCA 90 bp GTTGGGTGCATCCTTCAGAGGGCCCTGGCTAAAGCCCGCAGCGGGCGGCAAACTTCAAGGCCGGCAGGATaGTGGACAGGGAAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: VGCILQRALAKARSGRQTSRPAG*WTGKSR
Trigger: CCTGCTCTTCCCTGTCCACCATCCTGCCGGCCTTGA...AGTTTGCCGCCCGCTGCGGGCTTTAGCCAGGGCCCTCTGAAGGATGCACCCAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510739.1
CDS-3UTR CCA 90 bp CAGCCAACACCCCAGGCCAGAGTTGGCAAGGCCCGCCCGTTCCTGCAGGTTATATGTCTGGGACCTACCTaGACTCGGGGGCCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: QPTPQARVGKARPFLQVICLGPT*TRGPAD
Trigger: GTCAGCAGGCCCCCGAGTCCAGGTAGGTCCCAGACA...TATAACCTGCAGGAACGGGCGGGCCTTGCCAACTCTGGCCTGGGGTGTTGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR TCA 90 bp ATCAGCAGGACGGCACTGGTGCAGGCGGGGACGCTGCCACCCTCCACGTCCCCAAATCCCCGGCCGACTTaGTGTCGATGTTGTCAAAAC +
Preference number: 4 (lower is better)
Translates to: ISRTALVQAGTLPPSTSPNPRPT*CRCCQN
Trigger: GTTTTGACAACATCGACATCAAGTCGGCCGGGGATT...TGGGGACGTGGAGGGTGGCAGCGTCCCCGCCTGCACCAGTGCCGTCCTGCTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR TCA 90 bp CTTAACGAGGAACGCGAAGGACACAGGGCAGAGCGCCCACAGGACGGACGACGACGTAGAAGAGCACGTTaGAGCCGAAGGCCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: LNEEREGHRAERPQDGRRRRRAR*SRRPWP
Trigger: GGGCCAAGGCCTTCGGCTTCAACGTGCTCTTCTACG...TCGTCGTCCGTCCTGTGGGCGCTCTGCCCTGTGTCCTTCGCGTTCCTCGTTAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR TCA 90 bp CGCATTCCGAGTCTCCGGGATAAAGGAGTGTGGCCACTGGGCTGCATTACAAGCCCTGGCCCTATCCTGTaGGCTCCTGGGGGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: RIPSLRDKGVWPLGCITSPGPIL*APGGPA
Trigger: AGCTGGGCCCCCAGGAGCTCACAGGATAGGGCCAGG...GCTTGTAATGCAGCCCAGTGGCCACACTCCTTTATCCCGGAGACTCGGAATGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR GCA 90 bp CCACTGCTGGCCAGCGAGAGGCCTGAGTACAGGCAAGTGTCCGGCCTGGCAGAGTCGCATCTCGATGGATaGCTGCTCGCTGTACCATGC +
Preference number: 4 (lower is better)
Translates to: PLLASERPEYRQVSGLAESHLDG*LLAVPC
Trigger: GCATGGTACAGCGAGCAGGCATCCATCGAGATGCGA...CTCTGCCAGGCCGGACACTTGCCTGTACTCAGGCCTCTCGCTGGCCAGCAGTGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510739.1
CDS-3UTR GCA 90 bp TTCTGCTTAACGAGGAACGCGAAGGACACAGGGCAGAGCGCCCACAGGACGGACTCTGCGGATCTCCCGTaGCGCCTCCTCTCGCATCTC +
Preference number: 4 (lower is better)
Translates to: FCLTRNAKDTGQSAHRTDSADLP*RLLSHL
Trigger: GAGATGCGAGAGGAGGCGGCACGGGAGATCCGCAGA...GTCCGTCCTGTGGGCGCTCTGCCCTGTGTCCTTCGCGTTCCTCGTTAAGCAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR GCA 90 bp TTGCTAGCCTACCACATCAGCAGGACGGCACTGGTGCAGGCGGGGACGCTGCCAGACCAGTCTCTGCAGTaGCAGGGCCACCACACAGAT +
Preference number: 4 (lower is better)
Translates to: LLAYHISRTALVQAGTLPDQSLQ*QGHHTD
Trigger: ATCTGTGTGGTGGCCCTGGCACTGCAGAGACTGGTC...TGGCAGCGTCCCCGCCTGCACCAGTGCCGTCCTGCTGATGTGGTAGGCTAGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR GCA 90 bp CAGGGCAGAGCGCCCACAGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTGAGAAGTTTGCCAACTaGCTCATTCTGGGGCACGTT +
Preference number: 4 (lower is better)
Translates to: QGRAPTGRTTTSDTRPSAEKFAN*LILGHV
Trigger: AACGTGCCCCAGAATGAGGCAGTTGGCAAACTTCTC...AGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCTGTGGGCGCTCTGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR GCA 90 bp CTCCTCCACACACTCTGGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGAGAAGTTTGCCAACTaGCTCATTCTGGGGCACGTT +
Preference number: 4 (lower is better)
Translates to: LLHTLWSEGFRALCPGAEEKFAN*LILGHV
Trigger: AACGTGCCCCAGAATGAGGCAGTTGGCAAACTTCTC...CTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACCAGAGTGTGTGGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR GCA 90 bp CGCCCACAGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTGCCCCCTCCCTTTTCCTTTTGGAGCTaGTTCGTGATGCCGTCTTCA +
Preference number: 4 (lower is better)
Translates to: RPQDGRRQATRGPALPPPFSFWS*FVMPSS
Trigger: TGAAGACGGCATCACGAAGCAGCTCCAAAAGGAAAA...GGGAGGGGGCAGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCTGTGGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR GCA 90 bp TCCAAACCGAGCTGGTGCCACACAACTCCCTCAGGTGTGCACCACGGGCAGTTCTGCCACACCCGGGACTaGTGTCTGGGACCTACCTGG +
Preference number: 4 (lower is better)
Translates to: SKPSWCHTTPSGVHHGQFCHTRD*CLGPTW
Trigger: CCAGGTAGGTCCCAGACAGCAGTCCCGGGTGTGGCA...GAACTGCCCGTGGTGCACACCTGAGGGAGTTGTGTGGCACCAGCTCGGTTTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR GCA 90 bp CGCGCATTCCGAGTCTCCGGGATAAAGGAGTGTGGCCACTGGGCTGCATTACAACCAGGCCGCGGGCAATaGCGAGACCGCCCGTGTGAA +
Preference number: 4 (lower is better)
Translates to: RAFRVSGIKECGHWAALQPGRGQ*RDRPCE
Trigger: TTCACACGGGCGGTCTCGGCATTGCCCGCGGCCTGG...TTGTAATGCAGCCCAGTGGCCACACTCCTTTATCCCGGAGACTCGGAATGCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR GCA 90 bp GGTAAACCCGCCCCTCAGTTCCACCGATCAGCTTCGCCGTTTTCTCAGATCCGCAGCACGGGGAGCTCCTaGGGGTGGCACTGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: GKPAPQFHRSASPFSQIRSTGSS*GWHCFP
Trigger: AGGGAAGCAGTGCCACCCGCAGGAGCTCCCCGTGCT...GCGGATCTGAGAAAACGGCGAAGCTGATCGGTGGAACTGAGGGGCGGGTTTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR CCA 90 bp ATCAGCAGGACGGCACTGGTGCAGGCGGGGACGCTGCCACCCTCCACGTCCCCAAAGTCGTTGATGAGGTaGTGGTTGTGCTCGTTGAGG +
Preference number: 4 (lower is better)
Translates to: ISRTALVQAGTLPPSTSPKSLMR*WLCSLR
Trigger: CCTCAACGAGCACAACCACCACCTCATCAACGACTT...TGGGGACGTGGAGGGTGGCAGCGTCCCCGCCTGCACCAGTGCCGTCCTGCTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR CCA 90 bp CTCTGCGGATCTCCCGTGCCGCCTCCTCTCGCATCTCGATGGATGCCTGCTCGCCTGTACCATGCAGCATaGGGGGTGCAGATGAGGTTG +
Preference number: 4 (lower is better)
Translates to: LCGSPVPPPLASRWMPARLYHAA*GVQMRL
Trigger: CAACCTCATCTGCACCCCCCATGCTGCATGGTACAG...GCGAGCAGGCATCCATCGAGATGCGAGAGGAGGCGGCACGGGAGATCCGCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510739.1
CDS-3UTR CCA 90 bp TTCTGCTTAACGAGGAACGCGAAGGACACAGGGCAGAGCGCCCACAGGACGGACACCTTCCACAGCAGCTaGGATGCCAGTGGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: FCLTRNAKDTGQSAHRTDTFHSS*DASGGH
Trigger: GTGGCCCCCACTGGCATCCCAGCTGCTGTGGAAGGT...GTCCGTCCTGTGGGCGCTCTGCCCTGTGTCCTTCGCGTTCCTCGTTAAGCAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CCA 90 bp CACACACTCTGGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGACCAACTGCCTCATTCTaGGGCACGTTCCAACATACA +
Preference number: 4 (lower is better)
Translates to: HTLWSEGFRALCPGAEAGPTASF*GTFQHT
Trigger: TGTATGTTGGAACGTGCCCCAGAATGAGGCAGTTGG...TCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACCAGAGTGTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CCA 90 bp CAGGGCAGAGCGCCCACAGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTCCAAGCTTTTCCTTTTaGAGCTGCTTCGTGATGCCG +
Preference number: 4 (lower is better)
Translates to: QGRAPTGRTTTSDTRPSAPSFSF*SCFVMP
Trigger: CGGCATCACGAAGCAGCTCCAAAAGGAAAAGCTTGG...AGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCTGTGGGCGCTCTGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR CCA 90 bp GCCCGTGATCCCACCTCGGCACAGCTGGGGAAGGCCCTCTGCTCTAGGAAGCGGGCTCTGTCAACGTGCTaGTGGGTTCATGGGGTGAAT +
Preference number: 4 (lower is better)
Translates to: ARDPTSAQLGKALCSRKRALSTC*WVHGVN
Trigger: ATTCACCCCATGAACCCACCAGCACGTTGACAGAGC...CCGCTTCCTAGAGCAGAGGGCCTTCCCCAGCTGTGCCGAGGTGGGATCACGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504784.1
CDS-3UTR CCA 90 bp GTTCTGAAGTTTCTGCAAGAGCGACCCTTCCTCATCTCGCCCTCTCCCGCGTTCGGGGTGATCGGCTCGTaGGCAGCACGGGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: VLKFLQERPFLISPSPAFGVIGS*AARGAP
Trigger: AGGAGCTCCCCGTGCTGCCCACGAGCCGATCACCCC...GAACGCGGGAGAGGGCGAGATGAGGAAGGGTCGCTCTTGCAGAAACTTCAGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR CCA 90 bp GAGCCTGTGGGTCTCCTGAGCAAACAAGAATCAGGAAAGCTGCCCAAAGGCTGCTCCTGGGGGCTGGGCTaGGGTGATCGGCTCGTGGGC +
Preference number: 4 (lower is better)
Translates to: EPVGLLSKQESGKLPKGCSWGLG*GDRLVG
Trigger: GCCCACGAGCCGATCACCCCAGCCCAGCCCCCAGGA...GCAGCCTTTGGGCAGCTTTCCTGATTCTTGTTTGCTCAGGAGACCCACAGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR CAA 72 bp TCAGGTGTGCACCACGGGCAGTTCACCCACAGCCCCTaGCATGCGTGTGGACATGCCCACGTGACGTGCCAA +
Preference number: 4 (lower is better)
Translates to: SGVHHGQFTHSP*HACGHAHVTCQ
Trigger: TTGGCACGTCACGTGGGCATGTCCACACGCATGCAAGGGGCTGTGGGTGAACTGCCCGTGGTGCACACCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR TCA 90 bp GGGCACCGCCCAAGCTTTTCCTTTTGGAGCTGCTTCGTGATGCCGTCTTCATTTGGTCCTGCAGGGTGCTaGCACGCTGCAGCCCCAGCG +
Preference number: 4 (lower is better)
Translates to: GHRPSFSFWSCFVMPSSFGPAGC*HAAAPA
Trigger: CGCTGGGGCTGCAGCGTGTCAGCACCCTGCAGGACC...AAATGAAGACGGCATCACGAAGCAGCTCCAAAAGGAAAAGCTTGGGCGGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR TCA 90 bp CTCCTCCACACACTCTGGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGTCAGATGGTCCTTGTTaGCACAGTTCTTCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LLHTLWSEGFRALCPGAESDGPC*HSSSGC
Trigger: ACAGCCTGAAGAACTGTGTCAACAAGGACCATCTGA...CTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACCAGAGTGTGTGGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR TCA 90 bp ACACACTCTGGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGTCAGATGGTCCTTGTTaGCACAGTTCTTCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: THSGPRVSGPSAQAPRLESDGPC*HSSSGC
Trigger: ACAGCCTGAAGAACTGTGTCAACAAGGACCATCTGA...CTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACCAGAGTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR TCA 90 bp CTGGCCAGCGAGAGGCCTGAGTACAGGCAAGTGTCCGGCCTGGCAGAGGCGCCGTCAGATGGTCCTTGTTaGCACAGTTCTTCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LASERPEYRQVSGLAEAPSDGPC*HSSSGC
Trigger: ACAGCCTGAAGAACTGTGTCAACAAGGACCATCTGA...CGGCGCCTCTGCCAGGCCGGACACTTGCCTGTACTCAGGCCTCTCGCTGGCCAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510739.1
CDS-3UTR TCA 90 bp TGGCACTGCTTCCCTGGCTTCTGCGTTTTGCGCATCTCCTTGACTGCCTGGTTAGCAGGGGCCCGTTCATaGTCGGAGGTCGGACGCCTG +
Preference number: 4 (lower is better)
Translates to: WHCFPGFCVLRISLTAWLAGARS*SEVGRL
Trigger: CAGGCGTCCGACCTCCGATCATGAACGGGCCCCTGC...TAACCAGGCAGTCAAGGAGATGCGCAAAACGCAGAAGCCAGGGAAGCAGTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR TCA 90 bp ATGAAAACACAGGTGAGACCCAGAGGCATCACCCCGACTGACGGGAGGCGGACAGTGCACCAAGTCCGATaGTGCCCAAGGTCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: MKTQVRPRGITPTDGRRTVHQVR*CPRSPR
Trigger: GCGGGGAGACCTTGGGCATCATCGGACTTGGTGCAC...TGTCCGCCTCCCGTCAGTCGGGGTGATGCCTCTGGGTCTCACCTGTGTTTTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000504784.1
CDS-3UTR TCA 90 bp TCGGCACAGCTGGGGAAGGCCCTCTGCTCTAGGAAGCGGGACCCGGGTCCTCGCGGTGGGTTCATGGGGTaGATGTGTACAATGTTTTCC +
Preference number: 4 (lower is better)
Translates to: SAQLGKALCSRKRDPGPRGGFMG*MCTMFS
Trigger: GGAAAACATTGTACACATTCACCCCATGAACCCACC...GCGAGGACCCGGGTCCCGCTTCCTAGAGCAGAGGGCCTTCCCCAGCTGTGCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000504784.1
CDS-3UTR GCA 90 bp CTTAACGAGGAACGCGAAGGACACAGGGCAGAGCGCCCACAGGACGGACGACGACCCTTGTTGAGCAAGTaGGAGCTGCCCATCGAGAGG +
Preference number: 4 (lower is better)
Translates to: LNEEREGHRAERPQDGRRPLLSK*ELPIER
Trigger: CCTCTCGATGGGCAGCTCGCACTTGCTCAACAAGGG...TCGTCGTCCGTCCTGTGGGCGCTCTGCCCTGTGTCCTTCGCGTTCCTCGTTAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR GCA 90 bp GGGCACCGCCCAAGCTTTTCCTTTTGGAGCTGCTTCGTGATGCCGTCTTCATTTGGTTTCCGGGCCCTCTaGCCAGGCGCCGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GHRPSFSFWSCFVMPSSFGFRAL*PGAEAG
Trigger: TCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACC...AAATGAAGACGGCATCACGAAGCAGCTCCAAAAGGAAAAGCTTGGGCGGTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR GCA 90 bp TTCTGCTTAACGAGGAACGCGAAGGACACAGGGCAGAGCGCCCACAGGACGGACGGGCCACCACACAGATaGCTCCTCCACACACTCTGG +
Preference number: 4 (lower is better)
Translates to: FCLTRNAKDTGQSAHRTDGPPHR*LLHTLW
Trigger: CCAGAGTGTGTGGAGGAGGCATCTGTGTGGTGGCCC...GTCCGTCCTGTGGGCGCTCTGCCCTGTGTCCTTCGCGTTCCTCGTTAAGCAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR GCA 90 bp CTTAACGAGGAACGCGAAGGACACAGGGCAGAGCGCCCACAGGACGGACGACGAGACCAGTCTCTGCAGTaGCAGGGCCACCACACAGAT +
Preference number: 4 (lower is better)
Translates to: LNEEREGHRAERPQDGRRDQSLQ*QGHHTD
Trigger: ATCTGTGTGGTGGCCCTGGCACTGCAGAGACTGGTC...TCGTCGTCCGTCCTGTGGGCGCTCTGCCCTGTGTCCTTCGCGTTCCTCGTTAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR GCA 90 bp AGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTGCCCCCTCCCGCCTCCTTTTTCCTTTTGGAGCTaGTTCGTGATGCCGTCTTCA +
Preference number: 4 (lower is better)
Translates to: RTDDDKRHEAQRCPLPPPFSFWS*FVMPSS
Trigger: TGAAGACGGCATCACGAAGCAGCTCCAAAAGGAAAA...AGGAGGCGGGAGGGGGCAGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR GCA 90 bp CCTGGTCAGCTGGTAAACCCGCCCCTCAGTTCCACCGATCAGCTTCGCCGTTTTGCCAACGTGCCCATGTaGCGATTCCAGACACCGGCC +
Preference number: 4 (lower is better)
Translates to: PGQLVNPPLSSTDQLRRFANVPM*RFQTPA
Trigger: GGCCGGTGTCTGGAATCGGCACATGGGCACGTTGGC...AAAACGGCGAAGCTGATCGGTGGAACTGAGGGGCGGGTTTACCAGCTGACCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR GCA 90 bp CAAACCGAGCTGGTGCCACACAACTCCCTCAGGTGTGCACCACGGGCAGTTCACTCACCCACAGCCCCTTaGATGCGTGTGGACATGCCC +
Preference number: 4 (lower is better)
Translates to: QTELVPHNSLRCAPRAVHSPTAP*MRVDMP
Trigger: GGGCATGTCCACACGCATGCAAGGGGCTGTGGGTGA...GTGAACTGCCCGTGGTGCACACCTGAGGGAGTTGTGTGGCACCAGCTCGGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR CCA 90 bp TTAACGAGGAACGCGAAGGACACAGGGCAGAGCGCCCACAGGACGGACGACGACTACAGGTTCAGGATGTaGCACAGCGTCGAGTCGGCC +
Preference number: 4 (lower is better)
Translates to: LTRNAKDTGQSAHRTDDDYRFRM*HSVESA
Trigger: GGCCGACTCGACGCTGTGCCACATCCTGAACCTGTA...GTCGTCGTCCGTCCTGTGGGCGCTCTGCCCTGTGTCCTTCGCGTTCCTCGTTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR CCA 90 bp CGCTGGGCACCGCCCAAGCTTTTCCTTTTGGAGCTGCTTCGTGATGCCGTCTTCTCGGGCTTGACGGTTTaGCCAGGAGAAGGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: RWAPPKLFLLELLRDAVFSGLTV*PGEGAW
Trigger: CCACGCCCCTTCTCCTGGCCAAACCGTCAAGCCCGA...GAAGACGGCATCACGAAGCAGCTCCAAAAGGAAAAGCTTGGGCGGTGCCCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR CCA 90 bp CGCTGGGCACCGCCCAAGCTTTTCCTTTTGGAGCTGCTTCGTGATGCCGTCTTCCTCCTCCACACACTCTaGTCCGAGGGTTTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: RWAPPKLFLLELLRDAVFLLHTL*SEGFRA
Trigger: GGCCCGGAAACCCTCGGACCAGAGTGTGTGGAGGAG...GAAGACGGCATCACGAAGCAGCTCCAAAAGGAAAAGCTTGGGCGGTGCCCAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR CCA 90 bp GTTCTGAAGTTTCTGCAAGAGCGACCCTTCCTCATCTCGCCCTCTCCCGCGTTCGCTGCAGCCTGGGCCTaGCCCTATCCTGTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: VLKFLQERPFLISPSPAFAAAWA*PYPVSS
Trigger: GGAGCTCACAGGATAGGGCCAGGCCCAGGCTGCAGC...GAACGCGGGAGAGGGCGAGATGAGGAAGGGTCGCTCTTGCAGAAACTTCAGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR CCA 90 bp CGCGCATTCCGAGTCTCCGGGATAAAGGAGTGTGGCCACTGGGCTGCATTACAAACCCCAGGCCAGAGTTaGCAAGGCCCGCCCGTTCCT +
Preference number: 4 (lower is better)
Translates to: RAFRVSGIKECGHWAALQTPGQS*QGPPVP
Trigger: AGGAACGGGCGGGCCTTGCCAACTCTGGCCTGGGGT...TTGTAATGCAGCCCAGTGGCCACACTCCTTTATCCCGGAGACTCGGAATGCGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR CCA 90 bp TGGCACTGCTTCCCTGGCTTCTGCGTTTTGCGCATCTCCTTGACTGCCTGGTTAAGACCGCCGCGCAACTaGGGCCGGGGGAAGCACCTT +
Preference number: 4 (lower is better)
Translates to: WHCFPGFCVLRISLTAWLRPPRN*GRGKHL
Trigger: AAGGTGCTTCCCCCGGCCCCAGTTGCGCGGCGGTCT...TAACCAGGCAGTCAAGGAGATGCGCAAAACGCAGAAGCCAGGGAAGCAGTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR CCA 90 bp GTTCTGAAGTTTCTGCAAGAGCGACCCTTCCTCATCTCGCCCTCTCCCGCGTTCCTCTTCGTCGGTGTCTaGCCCAGCCTCCTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: VLKFLQERPFLISPSPAFLFVGV*PSLLGA
Trigger: AGCCCCCAGGAGGCTGGGCCAGACACCGACGAAGAG...GAACGCGGGAGAGGGCGAGATGAGGAAGGGTCGCTCTTGCAGAAACTTCAGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR CCA 90 bp CAAACCGAGCTGGTGCCACACAACTCCCTCAGGTGTGCACCACGGGCAGTTCACCCCCTTGCATGCGTGTaGACATGCCCACGTGACGTG +
Preference number: 4 (lower is better)
Translates to: QTELVPHNSLRCAPRAVHPLACV*TCPRDV
Trigger: CACGTCACGTGGGCATGTCCACACGCATGCAAGGGG...GTGAACTGCCCGTGGTGCACACCTGAGGGAGTTGTGTGGCACCAGCTCGGTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR CAA 72 bp CTGGCCCAGTGGGTGGCGGCTGTCAGATGGTCCTTGTaGACACAGTTCTTCAGGCTGTCTGGGATCCGGCCT +
Preference number: 4 (lower is better)
Translates to: LAQWVAAVRWSL*TQFFRLSGIRP
Trigger: AGGCCGGATCCCAGACAGCCTGAAGAACTGTGTCAACAAGGACCATCTGACAGCCGCCACCCACTGGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510739.1
CDS-3UTR TCA 90 bp CGCTGGGCACCGCCCAAGCTTTTCCTTTTGGAGCTGCTTCGTGATGCCGTCTTCTATAGGCAGCCCCATTaGGCTCAGGGTGCACGACGG +
Preference number: 4 (lower is better)
Translates to: RWAPPKLFLLELLRDAVFYRQPH*AQGARR
Trigger: CCGTCGTGCACCCTGAGCTCAATGGGGCTGCCTATA...GAAGACGGCATCACGAAGCAGCTCCAAAAGGAAAAGCTTGGGCGGTGCCCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR GCA 90 bp GCAGATGAGGTTGGGTGCATCCTTCAGAGGGCCCTGGCTAAAGCCCGCAGCGGGATCTCGATGGATGCCTaGTCGCTGTACCATGCAGCA +
Preference number: 4 (lower is better)
Translates to: ADEVGCILQRALAKARSGISMDA*SLYHAA
Trigger: TGCTGCATGGTACAGCGAGCAGGCATCCATCGAGAT...CCCGCTGCGGGCTTTAGCCAGGGCCCTCTGAAGGATGCACCCAACCTCATCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510739.1
CDS-3UTR GCA 90 bp CTTAACGAGGAACGCGAAGGACACAGGGCAGAGCGCCCACAGGACGGACGACGATCGCATCTCGATGGATaGCTGCTCGCTGTACCATGC +
Preference number: 4 (lower is better)
Translates to: LNEEREGHRAERPQDGRRSHLDG*LLAVPC
Trigger: GCATGGTACAGCGAGCAGGCATCCATCGAGATGCGA...TCGTCGTCCGTCCTGTGGGCGCTCTGCCCTGTGTCCTTCGCGTTCCTCGTTAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR GCA 90 bp GCTGGGCACCGCCCAAGCTTTTCCTTTTGGAGCTGCTTCGTGATGCCGTCTTCACCATTGAGCTCAGGGTaGACGACGGCGGGGTCCATG +
Preference number: 4 (lower is better)
Translates to: AGHRPSFSFWSCFVMPSSPLSSG*TTAGSM
Trigger: CATGGACCCCGCCGTCGTGCACCCTGAGCTCAATGG...TGAAGACGGCATCACGAAGCAGCTCCAAAAGGAAAAGCTTGGGCGGTGCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR GCA 90 bp CAAACCGAGCTGGTGCCACACAACTCCCTCAGGTGTGCACCACGGGCAGTTCACCGTGACGTGCCAACGTaGCCATGTGCCGATTCCAGA +
Preference number: 4 (lower is better)
Translates to: QTELVPHNSLRCAPRAVHRDVPT*PCADSR
Trigger: TCTGGAATCGGCACATGGGCACGTTGGCACGTCACG...GTGAACTGCCCGTGGTGCACACCTGAGGGAGTTGTGTGGCACCAGCTCGGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR GCA 90 bp CGCGCATTCCGAGTCTCCGGGATAAAGGAGTGTGGCCACTGGGCTGCATTACAACATGCCCACGTGACGTaGCAACGTGCCCATGTGCCG +
Preference number: 4 (lower is better)
Translates to: RAFRVSGIKECGHWAALQHAHVT*QRAHVP
Trigger: CGGCACATGGGCACGTTGGCACGTCACGTGGGCATG...TTGTAATGCAGCCCAGTGGCCACACTCCTTTATCCCGGAGACTCGGAATGCGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR CCA 90 bp TTAACGAGGAACGCGAAGGACACAGGGCAGAGCGCCCACAGGACGGACGACGACCTGTACCATGCAGCATaGGGGGTGCAGATGAGGTTG +
Preference number: 4 (lower is better)
Translates to: LTRNAKDTGQSAHRTDDDLYHAA*GVQMRL
Trigger: CAACCTCATCTGCACCCCCCATGCTGCATGGTACAG...GTCGTCGTCCGTCCTGTGGGCGCTCTGCCCTGTGTCCTTCGCGTTCCTCGTTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CCA 90 bp TTGCTAGCCTACCACATCAGCAGGACGGCACTGGTGCAGGCGGGGACGCTGCCAGTGGCGGCTGTCAGATaGTCCTTGTTGACACAGTTC +
Preference number: 4 (lower is better)
Translates to: LLAYHISRTALVQAGTLPVAAVR*SLLTQF
Trigger: GAACTGTGTCAACAAGGACCATCTGACAGCCGCCAC...TGGCAGCGTCCCCGCCTGCACCAGTGCCGTCCTGCTGATGTGGTAGGCTAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR CCA 90 bp TTAACGAGGAACGCGAAGGACACAGGGCAGAGCGCCCACAGGACGGACGACGACGCTACAACTGGTCACTaGCGTGGTCTCTATCCGCCT +
Preference number: 4 (lower is better)
Translates to: LTRNAKDTGQSAHRTDDDATTGH*RGLYPP
Trigger: AGGCGGATAGAGACCACGCCAGTGACCAGTTGTAGC...GTCGTCGTCCGTCCTGTGGGCGCTCTGCCCTGTGTCCTTCGCGTTCCTCGTTAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CCA 90 bp GGGCACCGCCCAAGCTTTTCCTTTTGGAGCTGCTTCGTGATGCCGTCTTCATTTCAGGACAGACGTCGATaGGCAGCGGGCACGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GHRPSFSFWSCFVMPSSFQDRRR*AAGTLG
Trigger: GCCCAGCGTGCCCGCTGCCCATCGACGTCTGTCCTG...AAATGAAGACGGCATCACGAAGCAGCTCCAAAAGGAAAAGCTTGGGCGGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
3UTR CAA 72 bp ATGCTGGCCCAGTGGGTGGCGGCTGTCAGATGGTCCTaGTTGACACAGTTCTTCAGGCTGTCTGGGATCCGG +
Preference number: 4 (lower is better)
Translates to: MLAQWVAAVRWS*LTQFFRLSGIR
Trigger: CCGGATCCCAGACAGCCTGAAGAACTGTGTCAACAAGGACCATCTGACAGCCGCCACCCACTGGGCCAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510739.1
CDS-3UTR TCA 90 bp CAGGGCAGAGCGCCCACAGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTTGGGAGAATAACTACTaGCTTCTTCTGCTTAACGAG +
Preference number: 4 (lower is better)
Translates to: QGRAPTGRTTTSDTRPSAWENNY*LLLLNE
Trigger: CTCGTTAAGCAGAAGAAGTCAGTAGTTATTCTCCCA...AGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCTGTGGGCGCTCTGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR TCA 90 bp CCTCCTCCACACACTCTGGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGATGGGAGAATAACTACTaGCTTCTTCTGCTTAACGAG +
Preference number: 4 (lower is better)
Translates to: PPPHTLVRGFPGPLPRRRWENNY*LLLLNE
Trigger: CTCGTTAAGCAGAAGAAGTCAGTAGTTATTCTCCCA...TCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACCAGAGTGTGTGGAGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR TCA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCAGGTTTTCTTTTTGTTaGCAGCTAAGCAAACAGATC +
Preference number: 4 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSRFSFC*QLSKQI
Trigger: GATCTGTTTGCTTAGCTGTCAACAAAAAGAAAACCT...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR GCA 90 bp GCTGTCAGATGGTCCTTGTTGACACAGTTCTTCAGGCTGTCTGGGATCCGGCCTCCATTGAGCTCAGGGTaGACGACGGCGGGGTCCATG +
Preference number: 4 (lower is better)
Translates to: AVRWSLLTQFFRLSGIRPPLSSG*TTAGSM
Trigger: CATGGACCCCGCCGTCGTGCACCCTGAGCTCAATGG...AGGCCGGATCCCAGACAGCCTGAAGAACTGTGTCAACAAGGACCATCTGACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510739.1
CDS-3UTR GCA 90 bp TGGCACTGCTTCCCTGGCTTCTGCGTTTTGCGCATCTCCTTGACTGCCTGGTTACATCAGCAGGCTGGGTaGCGATCGTGTGGCGCGTCA +
Preference number: 4 (lower is better)
Translates to: WHCFPGFCVLRISLTAWLHQQAG*RSCGAS
Trigger: TGACGCGCCACACGATCGGCACCCAGCCTGCTGATG...TAACCAGGCAGTCAAGGAGATGCGCAAAACGCAGAAGCCAGGGAAGCAGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR GCA 90 bp CGCGCATTCCGAGTCTCCGGGATAAAGGAGTGTGGCCACTGGGCTGCATTACAAGAGGTGGCCAGCATTTaGCTGGCCACTCACCCACTG +
Preference number: 4 (lower is better)
Translates to: RAFRVSGIKECGHWAALQEVASI*LATHPL
Trigger: CAGTGGGTGAGTGGCCAGGCAAATGCTGGCCACCTC...TTGTAATGCAGCCCAGTGGCCACACTCCTTTATCCCGGAGACTCGGAATGCGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR GCA 90 bp CGCGCATTCCGAGTCTCCGGGATAAAGGAGTGTGGCCACTGGGCTGCATTACAACCACAGCCCCTTGCATaGGTGTGGACATGCCCACGT +
Preference number: 4 (lower is better)
Translates to: RAFRVSGIKECGHWAALQPQPLA*VWTCPR
Trigger: ACGTGGGCATGTCCACACGCATGCAAGGGGCTGTGG...TTGTAATGCAGCCCAGTGGCCACACTCCTTTATCCCGGAGACTCGGAATGCGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR GCA 90 bp CGCGCATTCCGAGTCTCCGGGATAAAGGAGTGTGGCCACTGGGCTGCATTACAACAACTCCCTCAGGTGTaGACCACGGGCAGTTCACCC +
Preference number: 4 (lower is better)
Translates to: RAFRVSGIKECGHWAALQQLPQV*TTGSSP
Trigger: GGGTGAACTGCCCGTGGTGCACACCTGAGGGAGTTG...TTGTAATGCAGCCCAGTGGCCACACTCCTTTATCCCGGAGACTCGGAATGCGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR CCA 90 bp GCAGATGAGGTTGGGTGCATCCTTCAGAGGGCCCTGGCTAAAGCCCGCAGCGGGAAGTCGTTGATGAGGTaGTGGTTGTGCTCGTTGAGG +
Preference number: 4 (lower is better)
Translates to: ADEVGCILQRALAKARSGKSLMR*WLCSLR
Trigger: CCTCAACGAGCACAACCACCACCTCATCAACGACTT...CCCGCTGCGGGCTTTAGCCAGGGCCCTCTGAAGGATGCACCCAACCTCATCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510739.1
CDS-3UTR CCA 90 bp TTGCTAGCCTACCACATCAGCAGGACGGCACTGGTGCAGGCGGGGACGCTGCCACCAAGCTTTTCCTTTTaGAGCTGCTTCGTGATGCCG +
Preference number: 4 (lower is better)
Translates to: LLAYHISRTALVQAGTLPPSFSF*SCFVMP
Trigger: CGGCATCACGAAGCAGCTCCAAAAGGAAAAGCTTGG...TGGCAGCGTCCCCGCCTGCACCAGTGCCGTCCTGCTGATGTGGTAGGCTAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR CCA 90 bp CAAACCGAGCTGGTGCCACACAACTCCCTCAGGTGTGCACCACGGGCAGTTCACCAGGCGACCACGTGGTaGTACCTTCTCATGGATCTC +
Preference number: 4 (lower is better)
Translates to: QTELVPHNSLRCAPRAVHQATTW*YLLMDL
Trigger: GAGATCCATGAGAAGGTACCACCACGTGGTCGCCTG...GTGAACTGCCCGTGGTGCACACCTGAGGGAGTTGTGTGGCACCAGCTCGGTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR CCA 90 bp TGGCACTGCTTCCCTGGCTTCTGCGTTTTGCGCATCTCCTTGACTGCCTGGTTACCCCGCCACAAAAGCTaGCATCCCGAGGACCTGCTC +
Preference number: 4 (lower is better)
Translates to: WHCFPGFCVLRISLTAWLPRHKS*HPEDLL
Trigger: GAGCAGGTCCTCGGGATGCCAGCTTTTGTGGCGGGG...TAACCAGGCAGTCAAGGAGATGCGCAAAACGCAGAAGCCAGGGAAGCAGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR GCA 90 bp TTCTGCTTAACGAGGAACGCGAAGGACACAGGGCAGAGCGCCCACAGGACGGACATCTCGATGGATGCCTaGTCGCTGTACCATGCAGCA +
Preference number: 4 (lower is better)
Translates to: FCLTRNAKDTGQSAHRTDISMDA*SLYHAA
Trigger: TGCTGCATGGTACAGCGAGCAGGCATCCATCGAGAT...GTCCGTCCTGTGGGCGCTCTGCCCTGTGTCCTTCGCGTTCCTCGTTAAGCAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR GCA 90 bp TTAACGAGGAACGCGAAGGACACAGGGCAGAGCGCCCACAGGACGGACGACGACGAGAAGTTTGCCAACTaGCTCATTCTGGGGCACGTT +
Preference number: 4 (lower is better)
Translates to: LTRNAKDTGQSAHRTDDDEKFAN*LILGHV
Trigger: AACGTGCCCCAGAATGAGGCAGTTGGCAAACTTCTC...GTCGTCGTCCGTCCTGTGGGCGCTCTGCCCTGTGTCCTTCGCGTTCCTCGTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR GCA 90 bp GTTCTGAAGTTTCTGCAAGAGCGACCCTTCCTCATCTCGCCCTCTCCCGCGTTCCTAGGGAGCATGACGTaGAGGTCTGTGTGTGGACGC +
Preference number: 4 (lower is better)
Translates to: VLKFLQERPFLISPSPAFLGSMT*RSVCGR
Trigger: GCGTCCACACACAGACCTGCACGTCATGCTCCCTAG...GAACGCGGGAGAGGGCGAGATGAGGAAGGGTCGCTCTTGCAGAAACTTCAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR CCA 90 bp GCTGGGCACCGCCCAAGCTTTTCCTTTTGGAGCTGCTTCGTGATGCCGTCTTCACTCCCGGGCTACAACTaGTCACTGGCGTGGTCTCTA +
Preference number: 4 (lower is better)
Translates to: AGHRPSFSFWSCFVMPSSLPGYN*SLAWSL
Trigger: TAGAGACCACGCCAGTGACCAGTTGTAGCCCGGGAG...TGAAGACGGCATCACGAAGCAGCTCCAAAAGGAAAAGCTTGGGCGGTGCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR CCA 90 bp GCAGACGCTCCCGGCAGACCACGCGCATTTTTAACATCAGATTTTCTTCCGTCCTGGACATCAGCAGGCTaGGTGCCGATCGTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: ADAPGRPRAFLTSDFLPSWTSAG*VPIVWR
Trigger: GCGCCACACGATCGGCACCCAGCCTGCTGATGTCCA...GGACGGAAGAAAATCTGATGTTAAAAATGCGCGTGGTCTGCCGGGAGCGTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR CCA 90 bp GCAGACGCTCCCGGCAGACCACGCGCATTTTTAACATCAGATTTTCTTCCGTCCAAGGCTGCTCACTGCTaGACCAAAGCCAGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: ADAPGRPRAFLTSDFLPSKAAHC*TKARPR
Trigger: CCGCGGCCTGGCTTTGGTCCAGCAGTGAGCAGCCTT...GGACGGAAGAAAATCTGATGTTAAAAATGCGCGTGGTCTGCCGGGAGCGTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR CCA 90 bp GAGCCTGTGGGTCTCCTGAGCAAACAAGAATCAGGAAAGCTGCCCAAAGGCTGCCTGAAGGACAGCCGGTaGGGGGCGTCCTTCTGGTTT +
Preference number: 4 (lower is better)
Translates to: EPVGLLSKQESGKLPKGCLKDSR*GASFWF
Trigger: AAACCAGAAGGACGCCCCCCACCGGCTGTCCTTCAG...GCAGCCTTTGGGCAGCTTTCCTGATTCTTGTTTGCTCAGGAGACCCACAGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR TCA 90 bp CAGGGCAGAGCGCCCACAGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTAGGTTTTCTTTTTGTTaGCAGCTAAGCAAACAGATC +
Preference number: 4 (lower is better)
Translates to: QGRAPTGRTTTSDTRPSARFSFC*QLSKQI
Trigger: GATCTGTTTGCTTAGCTGTCAACAAAAAGAAAACCT...AGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCTGTGGGCGCTCTGCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR TCA 90 bp CAAACCGAGCTGGTGCCACACAACTCCCTCAGGTGTGCACCACGGGCAGTTCACTTTTGCGCATCTCCTTaGCTGCCTGGTTACCTCTGT +
Preference number: 4 (lower is better)
Translates to: QTELVPHNSLRCAPRAVHFCASP*LPGYLC
Trigger: ACAGAGGTAACCAGGCAGTCAAGGAGATGCGCAAAA...GTGAACTGCCCGTGGTGCACACCTGAGGGAGTTGTGTGGCACCAGCTCGGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR GCA 90 bp TTGCTAGCCTACCACATCAGCAGGACGGCACTGGTGCAGGCGGGGACGCTGCCAACTACTGACTTCTTCTaGTTAACGAGGAACGCGAAG +
Preference number: 4 (lower is better)
Translates to: LLAYHISRTALVQAGTLPTTDFF*LTRNAK
Trigger: CTTCGCGTTCCTCGTTAAGCAGAAGAAGTCAGTAGT...TGGCAGCGTCCCCGCCTGCACCAGTGCCGTCCTGCTGATGTGGTAGGCTAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR CCA 90 bp GCTGGGCACCGCCCAAGCTTTTCCTTTTGGAGCTGCTTCGTGATGCCGTCTTCACTGTACCATGCAGCATaGGGGGTGCAGATGAGGTTG +
Preference number: 4 (lower is better)
Translates to: AGHRPSFSFWSCFVMPSSLYHAA*GVQMRL
Trigger: CAACCTCATCTGCACCCCCCATGCTGCATGGTACAG...TGAAGACGGCATCACGAAGCAGCTCCAAAAGGAAAAGCTTGGGCGGTGCCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR CCA 90 bp TTCTGCTTAACGAGGAACGCGAAGGACACAGGGCAGAGCGCCCACAGGACGGACCCAACTGCCTCATTCTaGGGCACGTTCCAACATACA +
Preference number: 4 (lower is better)
Translates to: FCLTRNAKDTGQSAHRTDPTASF*GTFQHT
Trigger: TGTATGTTGGAACGTGCCCCAGAATGAGGCAGTTGG...GTCCGTCCTGTGGGCGCTCTGCCCTGTGTCCTTCGCGTTCCTCGTTAAGCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CCA 90 bp TCCAAACCGAGCTGGTGCCACACAACTCCCTCAGGTGTGCACCACGGGCAGTTCAGATTCAAGGTTTCCTaGACATCAGCAGGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SKPSWCHTTPSGVHHGQFRFKVS*TSAGWV
Trigger: CACCCAGCCTGCTGATGTCCAGGAAACCTTGAATCT...GAACTGCCCGTGGTGCACACCTGAGGGAGTTGTGTGGCACCAGCTCGGTTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR CCA 90 bp GTTCTGAAGTTTCTGCAAGAGCGACCCTTCCTCATCTCGCCCTCTCCCGCGTTCACAGGGTGTGTGCTGTaGGCAGGGAAACTGCGGAAA +
Preference number: 4 (lower is better)
Translates to: VLKFLQERPFLISPSPAFTGCVL*AGKLRK
Trigger: TTTCCGCAGTTTCCCTGCCCACAGCACACACCCTGT...GAACGCGGGAGAGGGCGAGATGAGGAAGGGTCGCTCTTGCAGAAACTTCAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR CCA 90 bp CGCGCATTCCGAGTCTCCGGGATAAAGGAGTGTGGCCACTGGGCTGCATTACAAGTGGCACTGCTTCCCTaGCTTCTGCGTTTTGCGCAT +
Preference number: 4 (lower is better)
Translates to: RAFRVSGIKECGHWAALQVALLP*LLRFAH
Trigger: ATGCGCAAAACGCAGAAGCCAGGGAAGCAGTGCCAC...TTGTAATGCAGCCCAGTGGCCACACTCCTTTATCCCGGAGACTCGGAATGCGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR CCA 90 bp GTTCTGAAGTTTCTGCAAGAGCGACCCTTCCTCATCTCGCCCTCTCCCGCGTTCCTGTCCAAACCGAGCTaGTGCCACACAACTCCCTCA +
Preference number: 4 (lower is better)
Translates to: VLKFLQERPFLISPSPAFLSKPS*CHTTPS
Trigger: TGAGGGAGTTGTGTGGCACCAGCTCGGTTTGGACAG...GAACGCGGGAGAGGGCGAGATGAGGAAGGGTCGCTCTTGCAGAAACTTCAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR TCA 90 bp GTTCTGAAGTTTCTGCAAGAGCGACCCTTCCTCATCTCGCCCTCTCCCGCGTTCCCCCGCACCAGATGGTaGTTTGTAGAAATGACCCGA +
Preference number: 4 (lower is better)
Translates to: VLKFLQERPFLISPSPAFPRTRW*FVEMTR
Trigger: TCGGGTCATTTCTACAAATCACCATCTGGTGCGGGG...GAACGCGGGAGAGGGCGAGATGAGGAAGGGTCGCTCTTGCAGAAACTTCAGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR GCA 90 bp CTTAACGAGGAACGCGAAGGACACAGGGCAGAGCGCCCACAGGACGGACGACGAACTACTGACTTCTTCTaGTTAACGAGGAACGCGAAG +
Preference number: 4 (lower is better)
Translates to: LNEEREGHRAERPQDGRRTTDFF*LTRNAK
Trigger: CTTCGCGTTCCTCGTTAAGCAGAAGAAGTCAGTAGT...TCGTCGTCCGTCCTGTGGGCGCTCTGCCCTGTGTCCTTCGCGTTCCTCGTTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR GCA 90 bp GCCCGTGATCCCACCTCGGCACAGCTGGGGAAGGCCCTCTGCTCTAGGAAGCGGCAAAAACTTACAAAATaGATCACCAAGAGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: ARDPTSAQLGKALCSRKRQKLTK*ITKSLE
Trigger: CTCCAGACTCTTGGTGATGCATTTTGTAAGTTTTTG...CCGCTTCCTAGAGCAGAGGGCCTTCCCCAGCTGTGCCGAGGTGGGATCACGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000504784.1
CDS-3UTR GCA 90 bp AGCCCCTTGCATGCGTGTGGACATGCCCACGTGACGTGCCAACGTGCCCATGTGAGAGACACATTAAAATaGCATCGAAGGTCCGACCAG +
Preference number: 4 (lower is better)
Translates to: SPLHACGHAHVTCQRAHVRDTLK*HRRSDQ
Trigger: CTGGTCGGACCTTCGATGGCATTTTAATGTGTCTCT...CACATGGGCACGTTGGCACGTCACGTGGGCATGTCCACACGCATGCAAGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR GCA 90 bp TGGCACTGCTTCCCTGGCTTCTGCGTTTTGCGCATCTCCTTGACTGCCTGGTTAAAGCTGCCCAAAGGCTaGTCACTGCTGGACCAAAGC +
Preference number: 4 (lower is better)
Translates to: WHCFPGFCVLRISLTAWLKLPKG*SLLDQS
Trigger: GCTTTGGTCCAGCAGTGAGCAGCCTTTGGGCAGCTT...TAACCAGGCAGTCAAGGAGATGCGCAAAACGCAGAAGCCAGGGAAGCAGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR GCA 90 bp GGTAAACCCGCCCCTCAGTTCCACCGATCAGCTTCGCCGTTTTCTCAGATCCGCAAGAATCAGGAAAGCTaGCCAAAGGCTGCTCACTGC +
Preference number: 4 (lower is better)
Translates to: GKPAPQFHRSASPFSQIRKNQES*PKAAHC
Trigger: GCAGTGAGCAGCCTTTGGGCAGCTTTCCTGATTCTT...GCGGATCTGAGAAAACGGCGAAGCTGATCGGTGGAACTGAGGGGCGGGTTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR CCA 90 bp GCAGACGCTCCCGGCAGACCACGCGCATTTTTAACATCAGATTTTCTTCCGTCCAGGACAAACCGAGTGTaGGGCTCAGGGAAAACCCCG +
Preference number: 4 (lower is better)
Translates to: ADAPGRPRAFLTSDFLPSRTNRV*GSGKTP
Trigger: CGGGGTTTTCCCTGAGCCCCACACTCGGTTTGTCCT...GGACGGAAGAAAATCTGATGTTAAAAATGCGCGTGGTCTGCCGGGAGCGTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR CCA 90 bp CCCGTTCCAGAGTCATCAGCTCTTCGTCGGTGTCTGGCCCAGCCTCCTGGGGGCTTCTTCCGTCCATTTTaGAAAGGGTTTTGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: PVPESSALRRCLAQPPGGFFRPF*KGFCCH
Trigger: ATGACAGCAAAACCCTTTCCAAAATGGACGGAAGAA...GCCCCCAGGAGGCTGGGCCAGACACCGACGAAGAGCTGATGACTCTGGAACGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR CCA 90 bp GTTCTGAAGTTTCTGCAAGAGCGACCCTTCCTCATCTCGCCCTCTCCCGCGTTCCGGGATAAAGGAGTGTaGCCACTGGGCTGCATTACA +
Preference number: 4 (lower is better)
Translates to: VLKFLQERPFLISPSPAFRDKGV*PLGCIT
Trigger: TGTAATGCAGCCCAGTGGCCACACTCCTTTATCCCG...GAACGCGGGAGAGGGCGAGATGAGGAAGGGTCGCTCTTGCAGAAACTTCAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR TCA 90 bp GCAGACGCTCCCGGCAGACCACGCGCATTTTTAACATCAGATTTTCTTCCGTCCCACCCAGCAGGCCAGTaGTGCCACCAAAGCCAAATT +
Preference number: 4 (lower is better)
Translates to: ADAPGRPRAFLTSDFLPSHPAGQ*CHQSQI
Trigger: AATTTGGCTTTGGTGGCATCACTGGCCTGCTGGGTG...GGACGGAAGAAAATCTGATGTTAAAAATGCGCGTGGTCTGCCGGGAGCGTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR TCA 90 bp CTTACGTGTGCATCTTTAATACAAATCCAGCTTCCCAATGAGAAAACCGTACCTCCCGTGTCCACCTCCTaGCGGCGCGGGACGACTGGG +
Preference number: 4 (lower is better)
Translates to: LTCASLIQIQLPNEKTVPPVSTS*RRGTTG
Trigger: CCCAGTCGTCCCGCGCCGTCAGGAGGTGGACACGGG...AGGTACGGTTTTCTCATTGGGAAGCTGGATTTGTATTAAAGATGCACACGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR TCA 90 bp GAGCCTGTGGGTCTCCTGAGCAAACAAGAATCAGGAAAGCTGCCCAAAGGCTGCACAGTGTGCACCCCTTaGAACCAGCTTCTTCACTCG +
Preference number: 4 (lower is better)
Translates to: EPVGLLSKQESGKLPKGCTVCTP*NQLLHS
Trigger: CGAGTGAAGAAGCTGGTTTCAAGGGGTGCACACTGT...GCAGCCTTTGGGCAGCTTTCCTGATTCTTGTTTGCTCAGGAGACCCACAGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR CCA 90 bp ATCACCAAGAGTCTGGAGAAGCAAATCGTGCTGTGTTCACGTGATGGAACCGTTCCACCTCGGCACAGCTaGGGAAGGCCCTCTGCTCTA +
Preference number: 4 (lower is better)
Translates to: ITKSLEKQIVLCSRDGTVPPRHS*GRPSAL
Trigger: TAGAGCAGAGGGCCTTCCCCAGCTGTGCCGAGGTGG...AACGGTTCCATCACGTGAACACAGCACGATTTGCTTCTCCAGACTCTTGGTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504784.1
3UTR CAA 72 bp CACCTGGGGATGAAGAGATCATACAGTGTGCACCCCTaGAAACCAGCTTCTTCACTCGCCATCATGCTGCCG +
Preference number: 4 (lower is better)
Translates to: HLGMKRSYSVHP*KPASSLAIMLP
Trigger: CGGCAGCATGATGGCGAGTGAAGAAGCTGGTTTCAAGGGGTGCACACTGTATGATCTCTTCATCCCCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR TCA 90 bp GGTAAACCCGCCCCTCAGTTCCACCGATCAGCTTCGCCGTTTTCTCAGATCCGCACGCATCTACCCGTGTaGGAAACCATGAAGAATCTT +
Preference number: 4 (lower is better)
Translates to: GKPAPQFHRSASPFSQIRTHLPV*ETMKNL
Trigger: AAGATTCTTCATGGTTTCTCACACGGGTAGATGCGT...GCGGATCTGAGAAAACGGCGAAGCTGATCGGTGGAACTGAGGGGCGGGTTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR GCA 90 bp AAACTGTACACAGACAAGAACGTTCATGGGAGAATAACTACTGACTTCTTCTGCCGCAGCGCCACTGCCTaGCCCACGCGACCAAGTCCG +
Preference number: 4 (lower is better)
Translates to: KLYTDKNVHGRITTDFFCRSATA*PTRPSP
Trigger: CGGACTTGGTCGCGTGGGGCAGGCAGTGGCGCTGCG...GCAGAAGAAGTCAGTAGTTATTCTCCCATGAACGTTCTTGTCTGTGTACAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR GCA 90 bp GGTAAACCCGCCCCTCAGTTCCACCGATCAGCTTCGCCGTTTTCTCAGATCCGCTCTTCAGGGAAAAGCTaGTCTGAATCACTGATCCCT +
Preference number: 4 (lower is better)
Translates to: GKPAPQFHRSASPFSQIRSSGKS*SESLIP
Trigger: AGGGATCAGTGATTCAGAGCAGCTTTTCCCTGAAGA...GCGGATCTGAGAAAACGGCGAAGCTGATCGGTGGAACTGAGGGGCGGGTTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR CCA 90 bp CTTACGTGTGCATCTTTAATACAAATCCAGCTTCCCAATGAGAAAACCGTACCTCACCCAGACCTGCTGTaGCCCGGGCCTGCCGTGCTC +
Preference number: 4 (lower is better)
Translates to: LTCASLIQIQLPNEKTVPHPDLL*PGPAVL
Trigger: GAGCACGGCAGGCCCGGGCCACAGCAGGTCTGGGTG...AGGTACGGTTTTCTCATTGGGAAGCTGGATTTGTATTAAAGATGCACACGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
3UTR CAA 72 bp CACTGCTTCCCTGGCTTCTGCGTTTTGCGCATCTCCTaGACTGCCTGGTTACCTCTGTTTGCATGTGATGGA +
Preference number: 4 (lower is better)
Translates to: HCFPGFCVLRIS*TAWLPLFACDG
Trigger: TCCATCACATGCAAACAGAGGTAACCAGGCAGTCAAGGAGATGCGCAAAACGCAGAAGCCAGGGAAGCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR TCA 90 bp CGCTGGGCACCGCCCAAGCTTTTCCTTTTGGAGCTGCTTCGTGATGCCGTCTTCTGGGAGAATAACTACTaGCTTCTTCTGCTTAACGAG +
Preference number: 4 (lower is better)
Translates to: RWAPPKLFLLELLRDAVFWENNY*LLLLNE
Trigger: CTCGTTAAGCAGAAGAAGTCAGTAGTTATTCTCCCA...GAAGACGGCATCACGAAGCAGCTCCAAAAGGAAAAGCTTGGGCGGTGCCCAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR TCA 90 bp TTAACGAGGAACGCGAAGGACACAGGGCAGAGCGCCCACAGGACGGACGACGACAGGTTTTCTTTTTGTTaGCAGCTAAGCAAACAGATC +
Preference number: 4 (lower is better)
Translates to: LTRNAKDTGQSAHRTDDDRFSFC*QLSKQI
Trigger: GATCTGTTTGCTTAGCTGTCAACAAAAAGAAAACCT...GTCGTCGTCCGTCCTGTGGGCGCTCTGCCCTGTGTCCTTCGCGTTCCTCGTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR TCA 90 bp GCAGACGCTCCCGGCAGACCACGCGCATTTTTAACATCAGATTTTCTTCCGTCCCCTATCACCTGGGGATaGAGAGATCATACAGTGTGC +
Preference number: 4 (lower is better)
Translates to: ADAPGRPRAFLTSDFLPSPITWG*RDHTVC
Trigger: GCACACTGTATGATCTCTTCATCCCCAGGTGATAGG...GGACGGAAGAAAATCTGATGTTAAAAATGCGCGTGGTCTGCCGGGAGCGTCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR CCA 90 bp CGCGCATTCCGAGTCTCCGGGATAAAGGAGTGTGGCCACTGGGCTGCATTACAAATCTCCTTGACTGCCTaGTTACCTCTGTTTGCATGT +
Preference number: 4 (lower is better)
Translates to: RAFRVSGIKECGHWAALQISLTA*LPLFAC
Trigger: ACATGCAAACAGAGGTAACCAGGCAGTCAAGGAGAT...TTGTAATGCAGCCCAGTGGCCACACTCCTTTATCCCGGAGACTCGGAATGCGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR TCA 90 bp GGGCACCGCCCAAGCTTTTCCTTTTGGAGCTGCTTCGTGATGCCGTCTTCATTTTCAGATGGTCCTTGTTaGCACAGTTCTTCAGGCTGT +
Preference number: 4 (lower is better)
Translates to: GHRPSFSFWSCFVMPSSFSDGPC*HSSSGC
Trigger: ACAGCCTGAAGAACTGTGTCAACAAGGACCATCTGA...AAATGAAGACGGCATCACGAAGCAGCTCCAAAAGGAAAAGCTTGGGCGGTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR GCA 90 bp AAACTGTACACAGACAAGAACGTTCATGGGAGAATAACTACTGACTTCTTCTGCAAGGGTTCCGACTCGTaGACATCCAGGGCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: KLYTDKNVHGRITTDFFCKGSDS*TSRAAP
Trigger: CGGCGCGGCCCTGGATGTGCACGAGTCGGAACCCTT...GCAGAAGAAGTCAGTAGTTATTCTCCCATGAACGTTCTTGTCTGTGTACAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CCA 90 bp CTTTGTAATGTTCTAAAAACTGTACACAGACAAGAACGTTCATGGGAGAATAACCGGCGGGGTCCATGCTaGCCCAGTGGGTGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: LCNVLKTVHRQERSWENNRRGPC*PSGWRL
Trigger: CAGCCGCCACCCACTGGGCCAGCATGGACCCCGCCG...GTTATTCTCCCATGAACGTTCTTGTCTGTGTACAGTTTTTAGAACATTACAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CCA 90 bp CTTACGTGTGCATCTTTAATACAAATCCAGCTTCCCAATGAGAAAACCGTACCTCCCGGGACTGCTGTCTaGGACCTACCTGGACTCGGG +
Preference number: 4 (lower is better)
Translates to: LTCASLIQIQLPNEKTVPPGTAV*DLPGLG
Trigger: CCCGAGTCCAGGTAGGTCCCAGACAGCAGTCCCGGG...AGGTACGGTTTTCTCATTGGGAAGCTGGATTTGTATTAAAGATGCACACGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR GCA 90 bp CTTTGTAATGTTCTAAAAACTGTACACAGACAAGAACGTTCATGGGAGAATAACCCGGCCATCCAGCAATaGCACCAGGGGCCGCGGGTG +
Preference number: 4 (lower is better)
Translates to: LCNVLKTVHRQERSWENNPAIQQ*HQGPRV
Trigger: CACCCGCGGCCCCTGGTGGCATTGCTGGATGGCCGG...GTTATTCTCCCATGAACGTTCTTGTCTGTGTACAGTTTTTAGAACATTACAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR GCA 90 bp AAACTGTACACAGACAAGAACGTTCATGGGAGAATAACTACTGACTTCTTCTGCTCGTTGAGGCCGCAGTaGAGGGTCACGCAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: KLYTDKNVHGRITTDFFCSLRPQ*RVTQSL
Trigger: CAGCGACTGCGTGACCCTGCACTGCGGCCTCAACGA...GCAGAAGAAGTCAGTAGTTATTCTCCCATGAACGTTCTTGTCTGTGTACAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR GCA 90 bp AAACTGTACACAGACAAGAACGTTCATGGGAGAATAACTACTGACTTCTTCTGCTCTGCGGATCTCCCGTaGCGCCTCCTCTCGCATCTC +
Preference number: 4 (lower is better)
Translates to: KLYTDKNVHGRITTDFFCSADLP*RLLSHL
Trigger: GAGATGCGAGAGGAGGCGGCACGGGAGATCCGCAGA...GCAGAAGAAGTCAGTAGTTATTCTCCCATGAACGTTCTTGTCTGTGTACAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CCA 90 bp AAACTGTACACAGACAAGAACGTTCATGGGAGAATAACTACTGACTTCTTCTGCTCCATGCTGGCCCAGTaGGTGGCGGCTGTCAGATGG +
Preference number: 4 (lower is better)
Translates to: KLYTDKNVHGRITTDFFCSMLAQ*VAAVRW
Trigger: CCATCTGACAGCCGCCACCCACTGGGCCAGCATGGA...GCAGAAGAAGTCAGTAGTTATTCTCCCATGAACGTTCTTGTCTGTGTACAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CCA 90 bp AAACTGTACACAGACAAGAACGTTCATGGGAGAATAACTACTGACTTCTTCTGCACCTTCCACAGCAGCTaGGATGCCAGTGGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: KLYTDKNVHGRITTDFFCTFHSS*DASGGH
Trigger: GTGGCCCCCACTGGCATCCCAGCTGCTGTGGAAGGT...GCAGAAGAAGTCAGTAGTTATTCTCCCATGAACGTTCTTGTCTGTGTACAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CCA 90 bp AAACTGTACACAGACAAGAACGTTCATGGGAGAATAACTACTGACTTCTTCTGCCTCCCGGGCTACAACTaGTCACTGGCGTGGTCTCTA +
Preference number: 4 (lower is better)
Translates to: KLYTDKNVHGRITTDFFCLPGYN*SLAWSL
Trigger: TAGAGACCACGCCAGTGACCAGTTGTAGCCCGGGAG...GCAGAAGAAGTCAGTAGTTATTCTCCCATGAACGTTCTTGTCTGTGTACAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CCA 90 bp ACAAAATGCATCACCAAGAGTCTGGAGAAGCAAATCGTGCTGTGTTCACGTGATCTGTCAACGTGCTGGTaGGTTCATGGGGTGAATGTG +
Preference number: 4 (lower is better)
Translates to: TKCITKSLEKQIVLCSRDLSTCW*VHGVNV
Trigger: CACATTCACCCCATGAACCCACCAGCACGTTGACAG...ATCACGTGAACACAGCACGATTTGCTTCTCCAGACTCTTGGTGATGCATTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504784.1
CDS-3UTR GCA 90 bp AGAGTCTGGAGAAGCAAATCGTGCTGTGTTCACGTGATGGAACCGTTATCAGAATGGAGAAGCAAATCGTaGTGTGTTCACGTGATGGAA +
Preference number: 4 (lower is better)
Translates to: RVWRSKSCCVHVMEPLSEWRSKS*CVHVME
Trigger: TTCCATCACGTGAACACAGCACGATTTGCTTCTCCA...TTCTGATAACGGTTCCATCACGTGAACACAGCACGATTTGCTTCTCCAGACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504784.1
CDS-3UTR TCA 90 bp AAACTGTACACAGACAAGAACGTTCATGGGAGAATAACTACTGACTTCTTCTGCAATCCCCGGCCGACTTaGTGTCGATGTTGTCAAAAC +
Preference number: 4 (lower is better)
Translates to: KLYTDKNVHGRITTDFFCNPRPT*CRCCQN
Trigger: GTTTTGACAACATCGACATCAAGTCGGCCGGGGATT...GCAGAAGAAGTCAGTAGTTATTCTCCCATGAACGTTCTTGTCTGTGTACAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR GCA 90 bp CTTTGTAATGTTCTAAAAACTGTACACAGACAAGAACGTTCATGGGAGAATAACACGCCGCGGGCACGTTaGAGACGGCAATGCCTAAAT +
Preference number: 4 (lower is better)
Translates to: LCNVLKTVHRQERSWENNTPRAR*RRQCLN
Trigger: ATTTAGGCATTGCCGTCTGCAACGTGCCCGCGGCGT...GTTATTCTCCCATGAACGTTCTTGTCTGTGTACAGTTTTTAGAACATTACAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR GCA 90 bp CTTTGTAATGTTCTAAAAACTGTACACAGACAAGAACGTTCATGGGAGAATAACGCAGATGAGGTTGGGTaGATCCTTCAGAGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LCNVLKTVHRQERSWENNADEVG*ILQRAL
Trigger: CAGGGCCCTCTGAAGGATGCACCCAACCTCATCTGC...GTTATTCTCCCATGAACGTTCTTGTCTGTGTACAGTTTTTAGAACATTACAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CCA 90 bp GCCAAAAACTTACAAAATGCATCACCAAGAGTCTGGAGAAGCAAATCGTGCTGTGTGCTGGTGGGTTCATaGGGTGAATGTGTACAATGT +
Preference number: 4 (lower is better)
Translates to: AKNLQNASPRVWRSKSCCVLVGS*GECVQC
Trigger: ACATTGTACACATTCACCCCATGAACCCACCAGCAC...ACAGCACGATTTGCTTCTCCAGACTCTTGGTGATGCATTTTGTAAGTTTTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504784.1
CDS-3UTR TCA 90 bp CTTACGTGTGCATCTTTAATACAAATCCAGCTTCCCAATGAGAAAACCGTACCTCCGTGTGAGAAACCATaGAGAATCTTCCAGAGCGAA +
Preference number: 4 (lower is better)
Translates to: LTCASLIQIQLPNEKTVPPCEKP*RIFQSE
Trigger: TTCGCTCTGGAAGATTCTTCATGGTTTCTCACACGG...AGGTACGGTTTTCTCATTGGGAAGCTGGATTTGTATTAAAGATGCACACGTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS CCA 90 bp CCTGACGGCGCGGGACGACTGGGACAGAGGCTGCTCCTGCCCCAGTaGCACCCAGACCTGCTGTGGCCCGGGCCTGCCGTGCTCCCGTCC +
Preference number: 5 (lower is better)
Translates to: PDGAGRLGQRLLLPQ*HPDLLWPGPAVLPS
Trigger: GGACGGGAGCACGGCAGGCCCGGGCCACAGCAGGTCTGGGTGCCACTGGGGCAGGAGCAGCCTCTGTCCCAGTCGTCCCGCGCCGTCAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS GCA 90 bp GGGGTCAAAGTCTTACTGCACGGGCCGCGGGCGGGGAGAGCAGACTaGGGCGCTCGCGCACACGCAGCGGCCCGCGCATGCGCAAGACCC +
Preference number: 5 (lower is better)
Translates to: GVKVLLHGPRAGRAD*GARAHAAARACARP
Trigger: GGGTCTTGCGCATGCGCGGGCCGCTGCGTGTGCGCGAGCGCCGCAGTCTGCTCTCCCCGCCCGCGGCCCGTGCAGTAAGACTTTGACCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513420.1
CDS GCA 90 bp CGGCTCCTGCCGCACACACGAAGGGCGCTCACCCTGAGGTTGCAGTaGCAGGCCCGAGGCCGCGCCCCTGTGGCCCCGAGGCCTACTCCT +
Preference number: 5 (lower is better)
Translates to: RLLPHTRRALTLRLQ*QARGRAPVAPRPTP
Trigger: AGGAGTAGGCCTCGGGGCCACAGGGGCGCGGCCTCGGGCCTGGCACTGCAACCTCAGGGTGAGCGCCCTTCGTGTGTGCGGCAGGAGCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR CAA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCTTGAAGCCGAAGGCCTaGGCCCGCAGCGCCACTGCC +
Preference number: 5 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSLKPKA*ARSATA
Trigger: GGCAGTGGCGCTGCGGGCCAAGGCCTTCGGCTTCAA...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000504092.5
CDS TCA 90 bp CGCCACTGCCTGCCCCACGCGACCTGGTGGCGTCAAGACACAGTGTaGGACCCTTGCTCACCCGTGGCCGGGAGGCCGGCCCCGAAAGCC +
Preference number: 5 (lower is better)
Translates to: RHCLPHATWWRQDTV*DPCSPVAGRPAPKA
Trigger: GGCTTTCGGGGCCGGCCTCCCGGCCACGGGTGAGCAAGGGTCTCACACTGTGTCTTGACGCCACCAGGTCGCGTGGGGCAGGCAGTGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511907.1
CDS GCA 90 bp ATGATCGGAGGTCGGACGCCAAGCGGCAGGCCCTTGTTGAGCAAGTaGGAGCTGCCCATCGAGAGGCGCGAGCGGCCGCGGGCCCCGACC +
Preference number: 5 (lower is better)
Translates to: MIGGRTPSGRPLLSK*ELPIERRERPRAPT
Trigger: GGTCGGGGCCCGCGGCCGCTCGCGCCTCTCGATGGGCAGCTCGCACTTGCTCAACAAGGGCCTGCCGCTTGGCGTCCGACCTCCGATCAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290921.10
CDS GCA 90 bp CCACAGCCTCGTTCAGGACCAAGCGGCAGGCCCTTGTTGAGCAAGTaGGAGCTGCCCATCGAGAGGCGCGAGCGGCCGCGGGCCCCGACC +
Preference number: 5 (lower is better)
Translates to: PQPRSGPSGRPLLSK*ELPIERRERPRAPT
Trigger: GGTCGGGGCCCGCGGCCGCTCGCGCCTCTCGATGGGCAGCTCGCACTTGCTCAACAAGGGCCTGCCGCTTGGTCCTGAACGAGGCTGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514495.1
CDS-3UTR CAA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCAGCGGCAGGCCCTTGTaGAGCAAGTGCGAGCTGCCC +
Preference number: 5 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSSGRPL*SKCELP
Trigger: GGGCAGCTCGCACTTGCTCAACAAGGGCCTGCCGCT...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR CAA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCCTCGGGCTTGACGGTTaGGCCAGGAGAAGGGGCGTG +
Preference number: 5 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSLGLDG*ARRRGV
Trigger: CACGCCCCTTCTCCTGGCCAAACCGTCAAGCCCGAG...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
ENST00000504092.5
CDS GCA 90 bp CCGTGGCTCCATCCTCACCCCGCAGCGGGCGGCAAACTCCCCCACTaGTGGCCAGCGAGAGGCCTGAGTACAGGCAAGTGTCCGGCCTGG +
Preference number: 5 (lower is better)
Translates to: PWLHPHPAAGGKLPH*WPARGLSTGKCPAW
Trigger: CCAGGCCGGACACTTGCCTGTACTCAGGCCTCTCGCTGGCCAGCAGTGGGGGAGTTTGCCGCCCGCTGCGGGGTGAGGATGGAGCCACGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511907.1
CDS-3UTR CAA 90 bp CGTCCCCAGGACAGACGTCGATGGGCAGCGGGCACGCTGGGCACCGCCCAAGCTAGCGGCAGGCCCTTGTaGAGCAAGTGCGAGCTGCCC +
Preference number: 5 (lower is better)
Translates to: RPQDRRRWAAGTLGTAQASGRPL*SKCELP
Trigger: GGGCAGCTCGCACTTGCTCAACAAGGGCCTGCCGCT...AGCTTGGGCGGTGCCCAGCGTGCCCGCTGCCCATCGACGTCTGTCCTGGGGACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR CAA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCTGGTGGTTGTGCTCGTaGAGGCCGCAGTGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSWWLCS*RPQCRV
Trigger: GACCCTGCACTGCGGCCTCAACGAGCACAACCACCA...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000504092.5
CDS-3UTR CAA 90 bp GCAGAGCGCCCACAGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTGCCCCTCGGGCTTGACGGTTaGGCCAGGAGAAGGGGCGTG +
Preference number: 5 (lower is better)
Translates to: AERPQDGRRQATRGPALPLGLDG*ARRRGV
Trigger: CACGCCCCTTCTCCTGGCCAAACCGTCAAGCCCGAG...GGGCAGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCTGTGGGCGCTCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS GCA 90 bp CGTCGGGGTCAAAGTCTTACAAGCGGCAGGCCCTTGTTGAGCAAGTaGGAGCTGCCCATCGAGAGGCGCGAGCGGCCGCGGGCCCCGACC +
Preference number: 5 (lower is better)
Translates to: RRGQSLTSGRPLLSK*ELPIERRERPRAPT
Trigger: GGTCGGGGCCCGCGGCCGCTCGCGCCTCTCGATGGGCAGCTCGCACTTGCTCAACAAGGGCCTGCCGCTTGTAAGACTTTGACCCCGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000382952.8
CDS GCA 90 bp GATCCGCGGCAATCACTGAAGCCTGCGTCGGGGTCAAAGTCTTACTaGACGGGCCGCGGGCGGGGAGAGCAGACTGCGGCGCTCGCGCAC +
Preference number: 5 (lower is better)
Translates to: DPRQSLKPASGSKSY*TGRGRGEQTAALAH
Trigger: GTGCGCGAGCGCCGCAGTCTGCTCTCCCCGCCCGCGGCCCGTGCAGTAAGACTTTGACCCCGACGCAGGCTTCAGTGATTGCCGCGGATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513420.1
CDS CCA 90 bp GTGGGACAGGGACATGGCGCTGGGGACGATACCTTCCACAGCAGCTaGGATGCCAGTGGGGGCCACGCCCACCACGCCCGGAGGGTACCT +
Preference number: 5 (lower is better)
Translates to: VGQGHGAGDDTFHSS*DASGGHAHHARRVP
Trigger: AGGTACCCTCCGGGCGTGGTGGGCGTGGCCCCCACTGGCATCCCAGCTGCTGTGGAAGGTATCGTCCCCAGCGCCATGTCCCTGTCCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290921.10
ENST00000382950.8
ENST00000382952.8
ENST00000503594.5
ENST00000504092.5
ENST00000514596.1
CDS CCA 90 bp TGGCTCCATCCTCACCCCGCAGCGGGCGGCAAACTCCCCCACTGCTaGCCAGCGAGAGGCCTGAGTACAGGCAAGTGTCCGGCCTGGCAG +
Preference number: 5 (lower is better)
Translates to: WLHPHPAAGGKLPHC*PARGLSTGKCPAWQ
Trigger: CTGCCAGGCCGGACACTTGCCTGTACTCAGGCCTCTCGCTGGCCAGCAGTGGGGGAGTTTGCCGCCCGCTGCGGGGTGAGGATGGAGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511907.1
CDS-3UTR CAA 90 bp AGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTGCCCCCTCCCGCCTCCTCCAAGCGGCAGGCCCTaGTTGAGCAAGTGCGAGCTG +
Preference number: 5 (lower is better)
Translates to: RTDDDKRHEAQRCPLPPPPSGRP*LSKCEL
Trigger: CAGCTCGCACTTGCTCAACAAGGGCCTGCCGCTTGG...AGGAGGCGGGAGGGGGCAGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290921.10
CDS-3UTR CAA 90 bp AGCGCCCACAGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTGCCCCCTCGACGCCGCGGGCACGTaGCAGACGGCAATGCCTAAA +
Preference number: 5 (lower is better)
Translates to: SAHRTDDDKRHEAQRCPLDAAGT*QTAMPK
Trigger: TTTAGGCATTGCCGTCTGCAACGTGCCCGCGGCGTC...GAGGGGGCAGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCTGTGGGCGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR CAA 90 bp AGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTGCCCCCTCCCGCCTCCTTGGTGGTTGTGCTCGTaGAGGCCGCAGTGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: RTDDDKRHEAQRCPLPPPWWLCS*RPQCRV
Trigger: GACCCTGCACTGCGGCCTCAACGAGCACAACCACCA...AGGAGGCGGGAGGGGGCAGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR CAA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCGGGGTGCAGATGAGGTaGGGTGCATCCTTCAGAGGG +
Preference number: 5 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSGVQMR*GASFRG
Trigger: CCCTCTGAAGGATGCACCCAACCTCATCTGCACCCC...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
ENST00000504092.5
CDS-3UTR CAA 90 bp CAGGGCAGAGCGCCCACAGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTCTCGGGCTTGACGGTTaGGCCAGGAGAAGGGGCGTG +
Preference number: 5 (lower is better)
Translates to: QGRAPTGRTTTSDTRPSALGLDG*ARRRGV
Trigger: CACGCCCCTTCTCCTGGCCAAACCGTCAAGCCCGAG...AGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCTGTGGGCGCTCTGCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CAA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCCTATCCGCCTCGGGCTaGACGGTTTGGCCAGGAGAA +
Preference number: 5 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSLSASG*TVWPGE
Trigger: TTCTCCTGGCCAAACCGTCAAGCCCGAGGCGGATAG...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
ENST00000504092.5
CDS GCA 90 bp AGATGCCTCCTCCACACACTCTGGTCCGAGGGTTTCCGGGCCCTCTaGCCAGGCGCCGAGGCTGGAGAGCTCCTCCCGGGCTACAACTGG +
Preference number: 5 (lower is better)
Translates to: RCLLHTLWSEGFRAL*PGAEAGELLPGYNW
Trigger: CCAGTTGTAGCCCGGGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACCAGAGTGTGTGGAGGAGGCATCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
ENST00000514596.1
CDS CCA 90 bp ACTCTGGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTaGAGAGCTCCTCCCGGGCTACAACTGGTCACTGGCGTGGTCTCT +
Preference number: 5 (lower is better)
Translates to: TLVRGFPGPLPRRRG*RAPPGLQLVTGVVS
Trigger: AGAGACCACGCCAGTGACCAGTTGTAGCCCGGGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACCAGAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
ENST00000514596.1
CDS CCA 90 bp CACTGCTGGCCAGCGAGAGGCCTGAGTACAGGCAAGTGTCCGGCCTaGCAGAGGCGCCGTCTGGAGGTCAAGGCCGGCAGGATGGTGGAC +
Preference number: 5 (lower is better)
Translates to: HCWPARGLSTGKCPA*QRRRLEVKAGRMVD
Trigger: GTCCACCATCCTGCCGGCCTTGACCTCCAGACGGCGCCTCTGCCAGGCCGGACACTTGCCTGTACTCAGGCCTCTCGCTGGCCAGCAGTG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510739.1
ENST00000511907.1
CDS CCA 90 bp GTCTGGACATGCCCTGCGGGGGTCGCACTGCACCCGAGGCTCAGCTaGGCACTGGGCAGTCTGCCTGGAAACAGGCCCCTGCATACGGTG +
Preference number: 5 (lower is better)
Translates to: VWTCPAGVALHPRLS*ALGSLPGNRPLHTV
Trigger: CACCGTATGCAGGGGCCTGTTTCCAGGCAGACTGCCCAGTGCCCAGCTGAGCCTCGGGTGCAGTGCGACCCCCGCAGGGCATGTCCAGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514669.5
CDS-3UTR CAA 90 bp ATCAGCAGGACGGCACTGGTGCAGGCGGGGACGCTGCCACCCTCCACGTCCCCAGACGCCGCGGGCACGTaGCAGACGGCAATGCCTAAA +
Preference number: 5 (lower is better)
Translates to: ISRTALVQAGTLPPSTSPDAAGT*QTAMPK
Trigger: TTTAGGCATTGCCGTCTGCAACGTGCCCGCGGCGTC...TGGGGACGTGGAGGGTGGCAGCGTCCCCGCCTGCACCAGTGCCGTCCTGCTGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR CAA 90 bp ACACACTCTGGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGTGGTGGTTGTGCTCGTaGAGGCCGCAGTGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: THSGPRVSGPSAQAPRLEWWLCS*RPQCRV
Trigger: GACCCTGCACTGCGGCCTCAACGAGCACAACCACCA...CTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACCAGAGTGTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR CAA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCCACCAGGAAGGCCCCTaGTCTCATCTGCTTGACGGT +
Preference number: 5 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSHQEGP*SHLLDG
Trigger: ACCGTCAAGCAGATGAGACAAGGGGCCTTCCTGGTG...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000504092.5
CDS-3UTR CAA 90 bp CGTCCCCAGGACAGACGTCGATGGGCAGCGGGCACGCTGGGCACCGCCCAAGCTGGGGTGCAGATGAGGTaGGGTGCATCCTTCAGAGGG +
Preference number: 5 (lower is better)
Translates to: RPQDRRRWAAGTLGTAQAGVQMR*GASFRG
Trigger: CCCTCTGAAGGATGCACCCAACCTCATCTGCACCCC...AGCTTGGGCGGTGCCCAGCGTGCCCGCTGCCCATCGACGTCTGTCCTGGGGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR CAA 90 bp CTCAGGGTGCACGACGGCGGGGTCCATGCTGGCCCAGTGGGTGGCGGCTGTCAGGGGGTGCAGATGAGGTaGGGTGCATCCTTCAGAGGG +
Preference number: 5 (lower is better)
Translates to: LRVHDGGVHAGPVGGGCQGVQMR*GASFRG
Trigger: CCCTCTGAAGGATGCACCCAACCTCATCTGCACCCC...CTGACAGCCGCCACCCACTGGGCCAGCATGGACCCCGCCGTCGTGCACCCTGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510739.1
CDS TCA 90 bp GAAGCCTGCGTCGGGGTCAAAGTCTTACAAGCGGCAGGCCCTTGTTaGGCAAGTGCGAGCTGCCCATCGAGAGGCGCGAGCGGCCGCGGG +
Preference number: 5 (lower is better)
Translates to: EACVGVKVLQAAGPC*ASASCPSRGASGRG
Trigger: CCCGCGGCCGCTCGCGCCTCTCGATGGGCAGCTCGCACTTGCTCAACAAGGGCCTGCCGCTTGTAAGACTTTGACCCCGACGCAGGCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382952.8
CDS CCA 90 bp CTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCCGGGCTACAACTaGTCACTGGCGTGGTCTCTATCCGCCTCGGGCTTGACGGTTTGG +
Preference number: 5 (lower is better)
Translates to: LCPGAEAGELLPGYN*SLAWSLSASGLTVW
Trigger: CCAAACCGTCAAGCCCGAGGCGGATAGAGACCACGCCAGTGACCAGTTGTAGCCCGGGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
ENST00000504092.5
ENST00000514596.1
CDS CCA 90 bp GGCCGCCTCACCGAGACCACCCGAAACGTCCGATTCCCCAAACGCTaGCGGGACAAGGACAGCGGTCAGCAGGAGTGGGCTGCCAAGTCC +
Preference number: 5 (lower is better)
Translates to: GRLTETTRNVRFPKR*RDKDSGQQEWAAKS
Trigger: GGACTTGGCAGCCCACTCCTGCTGACCGCTGTCCTTGTCCCGCCAGCGTTTGGGGAATCGGACGTTTCGGGTGGTCTCGGTGAGGCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514210.5
CDS CCA 90 bp TCAGAAGTGGACCTCACTGCATCTGCCACACCCGGGACTGCTGTCTaGGACCTACCTGGACTCGGGGGCCTGCTGACAGCCAGGGGCCCC +
Preference number: 5 (lower is better)
Translates to: SEVDLTASATPGTAV*DLPGLGGLLTARGP
Trigger: GGGGCCCCTGGCTGTCAGCAGGCCCCCGAGTCCAGGTAGGTCCCAGACAGCAGTCCCGGGTGTGGCAGATGCAGTGAGGTCCACTTCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR CAA 90 bp GGGTGCACGACGGCGGGGTCCATGCTGGCCCAGTGGGTGGCGGCTGTCAGATGGCACCAGGAAGGCCCCTaGTCTCATCTGCTTGACGGT +
Preference number: 5 (lower is better)
Translates to: GCTTAGSMLAQWVAAVRWHQEGP*SHLLDG
Trigger: ACCGTCAAGCAGATGAGACAAGGGGCCTTCCTGGTG...CCATCTGACAGCCGCCACCCACTGGGCCAGCATGGACCCCGCCGTCGTGCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510739.1
CDS-3UTR CAA 90 bp CAGGGCAGAGCGCCCACAGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTGGGGTGCAGATGAGGTaGGGTGCATCCTTCAGAGGG +
Preference number: 5 (lower is better)
Translates to: QGRAPTGRTTTSDTRPSAGVQMR*GASFRG
Trigger: CCCTCTGAAGGATGCACCCAACCTCATCTGCACCCC...AGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCTGTGGGCGCTCTGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CAA 90 bp CCTCCTCCACACACTCTGGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGGGTGCAGATGAGGTaGGGTGCATCCTTCAGAGGG +
Preference number: 5 (lower is better)
Translates to: PPPHTLVRGFPGPLPRRRGVQMR*GASFRG
Trigger: CCCTCTGAAGGATGCACCCAACCTCATCTGCACCCC...TCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACCAGAGTGTGTGGAGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CAA 90 bp CACACACTCTGGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGACTATCCGCCTCGGGCTaGACGGTTTGGCCAGGAGAA +
Preference number: 5 (lower is better)
Translates to: HTLWSEGFRALCPGAEAGLSASG*TVWPGE
Trigger: TTCTCCTGGCCAAACCGTCAAGCCCGAGGCGGATAG...TCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACCAGAGTGTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CAA 90 bp GACGGCGGGGTCCATGCTGGCCCAGTGGGTGGCGGCTGTCAGATGGTCCTTGTTTGGTGGTTGTGCTCGTaGAGGCCGCAGTGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: DGGVHAGPVGGGCQMVLVWWLCS*RPQCRV
Trigger: GACCCTGCACTGCGGCCTCAACGAGCACAACCACCA...AACAAGGACCATCTGACAGCCGCCACCCACTGGGCCAGCATGGACCCCGCCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510739.1
CDS-3UTR CAA 90 bp ATCAGCAGGACGGCACTGGTGCAGGCGGGGACGCTGCCACCCTCCACGTCCCCACACCAGGAAGGCCCCTaGTCTCATCTGCTTGACGGT +
Preference number: 5 (lower is better)
Translates to: ISRTALVQAGTLPPSTSPHQEGP*SHLLDG
Trigger: ACCGTCAAGCAGATGAGACAAGGGGCCTTCCTGGTG...TGGGGACGTGGAGGGTGGCAGCGTCCCCGCCTGCACCAGTGCCGTCCTGCTGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR CAA 90 bp ACACACTCTGGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGCACCAGGAAGGCCCCTaGTCTCATCTGCTTGACGGT +
Preference number: 5 (lower is better)
Translates to: THSGPRVSGPSAQAPRLEHQEGP*SHLLDG
Trigger: ACCGTCAAGCAGATGAGACAAGGGGCCTTCCTGGTG...CTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACCAGAGTGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR CAA 90 bp CCCGTTCCAGAGTCATCAGCTCTTCGTCGGTGTCTGGCCCAGCCTCCTGGGGGCGCCGTCTTACTTCTTTaGCCAGGCACCTGGGGCCGG +
Preference number: 5 (lower is better)
Translates to: PVPESSALRRCLAQPPGGAVLLL*PGTWGR
Trigger: CCGGCCCCAGGTGCCTGGCAAAAGAAGTAAGACGGC...GCCCCCAGGAGGCTGGGCCAGACACCGACGAAGAGCTGATGACTCTGGAACGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR CAA 90 bp CCACGTGACGTGCCAACGTGCCCATGTGCCGATTCCAGACACCGGCCTGCCGGCTTCACCCACAGCCCCTaGCATGCGTGTGGACATGCC +
Preference number: 5 (lower is better)
Translates to: PRDVPTCPCADSRHRPAGFTHSP*HACGHA
Trigger: GGCATGTCCACACGCATGCAAGGGGCTGTGGGTGAA...GCCGGCAGGCCGGTGTCTGGAATCGGCACATGGGCACGTTGGCACGTCACGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS GCA 90 bp GAACGCCTCAGAAGTGGACCTCACTGCATCTGCCACACCCGGGACTaGTGTCTGGGACCTACCTGGACTCGGGGGCCTGCTGACAGCCAG +
Preference number: 5 (lower is better)
Translates to: ERLRSGPHCICHTRD*CLGPTWTRGPADSQ
Trigger: CTGGCTGTCAGCAGGCCCCCGAGTCCAGGTAGGTCCCAGACAGCAGTCCCGGGTGTGGCAGATGCAGTGAGGTCCACTTCTGAGGCGTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR CAA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCCCTTGTCTCATCTGCTaGACGGTGAAGTCGTTGATG +
Preference number: 5 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSPCLIC*TVKSLM
Trigger: CATCAACGACTTCACCGTCAAGCAGATGAGACAAGG...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000504092.5
CDS-3UTR CAA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCGCTGTCAGATGGTCCTaGTTGACACAGTTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSAVRWS*LTQFFR
Trigger: CCTGAAGAACTGTGTCAACAAGGACCATCTGACAGC...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
ENST00000504092.5
CDS-3UTR CAA 90 bp AGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTGCCCCCTCCCGCCTCCTCCCAAGCTTTTCCTTTaGGAGCTGCTTCGTGATGCC +
Preference number: 5 (lower is better)
Translates to: RTDDDKRHEAQRCPLPPPPKLFL*ELLRDA
Trigger: GGCATCACGAAGCAGCTCCAAAAGGAAAAGCTTGGG...AGGAGGCGGGAGGGGGCAGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS GCA 90 bp CTCACAGACTCCAGGGAACGCCTCAGAAGTGGACCTCACTGCATCTaGCACACCCGGGACTGCTGTCTGGGACCTACCTGGACTCGGGGG +
Preference number: 5 (lower is better)
Translates to: LTDSRERLRSGPHCI*HTRDCCLGPTWTRG
Trigger: CCCCCGAGTCCAGGTAGGTCCCAGACAGCAGTCCCGGGTGTGGCAGATGCAGTGAGGTCCACTTCTGAGGCGTTCCCTGGAGTCTGTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS CCA 90 bp TACCAACACTGCCCAACTGGATCTTCTAGACCTGAGAGGGGGTCCTaGGGTCTGGACATGCCCTGCGGGGGTCGCACTGCACCCGAGGCT +
Preference number: 5 (lower is better)
Translates to: YQHCPTGSSRPERGS*GLDMPCGGRTAPEA
Trigger: AGCCTCGGGTGCAGTGCGACCCCCGCAGGGCATGTCCAGACCCCAGGACCCCCTCTCAGGTCTAGAAGATCCAGTTGGGCAGTGTTGGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000514669.5
CDS-3UTR CAA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCAAATCCCCGGCCGACTaGATGTCGATGTTGTCAAAA +
Preference number: 5 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSKSPAD*MSMLSK
Trigger: TTTTGACAACATCGACATCAAGTCGGCCGGGGATTT...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000504092.5
CDS-3UTR CAA 90 bp GCAGAGCGCCCACAGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTGCCCCCTTGTCTCATCTGCTaGACGGTGAAGTCGTTGATG +
Preference number: 5 (lower is better)
Translates to: AERPQDGRRQATRGPALPPCLIC*TVKSLM
Trigger: CATCAACGACTTCACCGTCAAGCAGATGAGACAAGG...GGGCAGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCTGTGGGCGCTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR CAA 90 bp TTCTGCTTAACGAGGAACGCGAAGGACACAGGGCAGAGCGCCCACAGGACGGACCTCGGGCTTGACGGTTaGGCCAGGAGAAGGGGCGTG +
Preference number: 5 (lower is better)
Translates to: FCLTRNAKDTGQSAHRTDLGLDG*ARRRGV
Trigger: CACGCCCCTTCTCCTGGCCAAACCGTCAAGCCCGAG...GTCCGTCCTGTGGGCGCTCTGCCCTGTGTCCTTCGCGTTCCTCGTTAAGCAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CAA 90 bp CAGGGCAGAGCGCCCACAGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTCCCAAGCTTTTCCTTTaGGAGCTGCTTCGTGATGCC +
Preference number: 5 (lower is better)
Translates to: QGRAPTGRTTTSDTRPSAPKLFL*ELLRDA
Trigger: GGCATCACGAAGCAGCTCCAAAAGGAAAAGCTTGGG...AGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCTGTGGGCGCTCTGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR CAA 90 bp TTGCTAGCCTACCACATCAGCAGGACGGCACTGGTGCAGGCGGGGACGCTGCCAACAAGCGGCAGGCCCTaGTTGAGCAAGTGCGAGCTG +
Preference number: 5 (lower is better)
Translates to: LLAYHISRTALVQAGTLPTSGRP*LSKCEL
Trigger: CAGCTCGCACTTGCTCAACAAGGGCCTGCCGCTTGT...TGGCAGCGTCCCCGCCTGCACCAGTGCCGTCCTGCTGATGTGGTAGGCTAGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382952.8
CDS-3UTR CAA 90 bp CGCATTCCGAGTCTCCGGGATAAAGGAGTGTGGCCACTGGGCTGCATTACAAGCCACCCCAGGCCAGAGTaGGCAAGGCCCGCCCGTTCC +
Preference number: 5 (lower is better)
Translates to: RIPSLRDKGVWPLGCITSHPRPE*ARPARS
Trigger: GGAACGGGCGGGCCTTGCCAACTCTGGCCTGGGGTG...GCTTGTAATGCAGCCCAGTGGCCACACTCCTTTATCCCGGAGACTCGGAATGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS TCA 90 bp GCTGGGCACTGGGCAGTCTGCCTGGAAACAGGCCCCTGCATACGGTaGTGGGGTCTCTGTCCTCTTGGTCCTAGAAGCGACTGTGACCCG +
Preference number: 5 (lower is better)
Translates to: AGHWAVCLETGPCIR*WGLCPLGPRSDCDP
Trigger: CGGGTCACAGTCGCTTCTAGGACCAAGAGGACAGAGACCCCATCACCGTATGCAGGGGCCTGTTTCCAGGCAGACTGCCCAGTGCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514669.5
CDS GCA 90 bp TTTGACCATCTGCCAAGGATGACACCAGCTGTGGTCAAGCCAAGGTaGCCACGCACGCTCCACACGAGCGCTCCACGTCCGCTCCAACGC +
Preference number: 5 (lower is better)
Translates to: FDHLPRMTPAVVKPR*PRTLHTSAPRPLQR
Trigger: GCGTTGGAGCGGACGTGGAGCGCTCGTGTGGAGCGTGCGTGGGCACCTTGGCTTGACCACAGCTGGTGTCATCCTTGGCAGATGGTCAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511907.1
CDS GCA 90 bp TGTCCCCAGTGTCCAAGAACCAGGGGACGGAGGGCACAGGGTGTGTaGTGTGGGCAGGGAAACTGCGGAAAGGCTCTGCCTCCTGTTCTG +
Preference number: 5 (lower is better)
Translates to: CPQCPRTRGRRAQGV*CGQGNCGKALPPVL
Trigger: CAGAACAGGAGGCAGAGCCTTTCCGCAGTTTCCCTGCCCACAGCACACACCCTGTGCCCTCCGTCCCCTGGTTCTTGGACACTGGGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS CCA 90 bp GCATCCTTCAGAGGGCCCTGGCTAAAGCTGGGAACAGCACAGGCATaGTCAGTGCAGCCTGAGTGCTGTGGCTGGGTACGGAGGGGAGGT +
Preference number: 5 (lower is better)
Translates to: ASFRGPWLKLGTAQA*SVQPECCGWVRRGG
Trigger: ACCTCCCCTCCGTACCCAGCCACAGCACTCAGGCTGCACTGACCATGCCTGTGCTGTTCCCAGCTTTAGCCAGGGCCCTCTGAAGGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382950.8
CDS-3UTR CAA 90 bp CGCCCACAGGACGGACGACGACAAGCGACACGAGGCCCAGCGCTGCCCCCTCCCGACTTGATGTCGATGTaGTCAAAACCACTGCCAATC +
Preference number: 5 (lower is better)
Translates to: RPQDGRRQATRGPALPPPDLMSM*SKPLPI
Trigger: GATTGGCAGTGGTTTTGACAACATCGACATCAAGTC...GGGAGGGGGCAGCGCTGGGCCTCGTGTCGCTTGTCGTCGTCCGTCCTGTGGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR CAA 90 bp CCAGTGGGTGGCGGCTGTCAGATGGTCCTTGTTGACACAGTTCTTCAGGCTGTCTTGAAGCCGAAGGCCTaGGCCCGCAGCGCCACTGCC +
Preference number: 5 (lower is better)
Translates to: PVGGGCQMVLVDTVLQAVLKPKA*ARSATA
Trigger: GGCAGTGGCGCTGCGGGCCAAGGCCTTCGGCTTCAA...GACAGCCTGAAGAACTGTGTCAACAAGGACCATCTGACAGCCGCCACCCACTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510739.1
CDS-3UTR CAA 90 bp CACACACTCTGGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGCTGTCAGATGGTCCTaGTTGACACAGTTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: HTLWSEGFRALCPGAEAGAVRWS*LTQFFR
Trigger: CCTGAAGAACTGTGTCAACAAGGACCATCTGACAGC...TCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACCAGAGTGTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CAA 90 bp ATTGAGCTCAGGGTGCACGACGGCGGGGTCCATGCTGGCCCAGTGGGTGGCGGCGCTGTCAGATGGTCCTaGTTGACACAGTTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: IELRVHDGGVHAGPVGGGAVRWS*LTQFFR
Trigger: CCTGAAGAACTGTGTCAACAAGGACCATCTGACAGC...GCCGCCACCCACTGGGCCAGCATGGACCCCGCCGTCGTGCACCCTGAGCTCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510739.1
CDS TCA 90 bp GGTCCATGCTGGCCCAGTGGGTGGCGGCTGTCAGATGGTCCTTGTTaGCACAGTTCTTCAGGCTGTCTGGGATCCGGCCTGGGAGATGCA +
Preference number: 5 (lower is better)
Translates to: GPCWPSGWRLSDGPC*HSSSGCLGSGLGDA
Trigger: TGCATCTCCCAGGCCGGATCCCAGACAGCCTGAAGAACTGTGTCAACAAGGACCATCTGACAGCCGCCACCCACTGGGCCAGCATGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514596.1
CDS GCA 90 bp CCACGGGAGAAGGGGGCCCGAGGGAGCTGTCTGTGTGCAGGAGCCTaGTCTGTCAACGTGCTGGTGGGTTCATGGGGTGAATGTGTACAA +
Preference number: 5 (lower is better)
Translates to: PREKGARGSCLCAGA*SVNVLVGSWGECVQ
Trigger: TTGTACACATTCACCCCATGAACCCACCAGCACGTTGACAGAGCAGGCTCCTGCACACAGACAGCTCCCTCGGGCCCCCTTCTCCCGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504784.1
CDS CCA 90 bp GAAGGTCCGACCAGAACTCACAGACTCCAGGGAACGCCTCAGAAGTaGACCTCACTGCATCTGCCACACCCGGGACTGCTGTCTGGGACC +
Preference number: 5 (lower is better)
Translates to: EGPTRTHRLQGTPQK*TSLHLPHPGLLSGT
Trigger: GGTCCCAGACAGCAGTCCCGGGTGTGGCAGATGCAGTGAGGTCCACTTCTGAGGCGTTCCCTGGAGTCTGTGAGTTCTGGTCGGACCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR CAA 90 bp ACACACTCTGGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGATTGTCCTGAGAAGTTaGCCAACTGCCTCATTCTGG +
Preference number: 5 (lower is better)
Translates to: THSGPRVSGPSAQAPRLEIVLRS*PTASFW
Trigger: CCAGAATGAGGCAGTTGGCAAACTTCTCAGGACAAT...CTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACCAGAGTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS GCA 90 bp CCAGAACTCACAGACTCCAGGGAACGCCTCAGAAGTGGACCTCACTaGATCTGCCACACCCGGGACTGCTGTCTGGGACCTACCTGGACT +
Preference number: 5 (lower is better)
Translates to: PELTDSRERLRSGPH*ICHTRDCCLGPTWT
Trigger: AGTCCAGGTAGGTCCCAGACAGCAGTCCCGGGTGTGGCAGATGCAGTGAGGTCCACTTCTGAGGCGTTCCCTGGAGTCTGTGAGTTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR CAA 90 bp GGGCACCGCCCAAGCTTTTCCTTTTGGAGCTGCTTCGTGATGCCGTCTTCATTTTTGAAGCCGAAGGCCTaGGCCCGCAGCGCCACTGCC +
Preference number: 5 (lower is better)
Translates to: GHRPSFSFWSCFVMPSSFLKPKA*ARSATA
Trigger: GGCAGTGGCGCTGCGGGCCAAGGCCTTCGGCTTCAA...AAATGAAGACGGCATCACGAAGCAGCTCCAAAAGGAAAAGCTTGGGCGGTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR CAA 90 bp CTCTGCGGATCTCCCGTGCCGCCTCCTCTCGCATCTCGATGGATGCCTGCTCGCCCTTGTCTCATCTGCTaGACGGTGAAGTCGTTGATG +
Preference number: 5 (lower is better)
Translates to: LCGSPVPPPLASRWMPARPCLIC*TVKSLM
Trigger: CATCAACGACTTCACCGTCAAGCAGATGAGACAAGG...GCGAGCAGGCATCCATCGAGATGCGAGAGGAGGCGGCACGGGAGATCCGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510739.1
CDS-3UTR CAA 90 bp GGTCCGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTGGAGAGCTCCTCCCTTCAGGTTTTCTTTTaGTTGACAGCTAAGCAAACA +
Preference number: 5 (lower is better)
Translates to: GPRVSGPSAQAPRLESSSLQVFF*LTAKQT
Trigger: TGTTTGCTTAGCTGTCAACAAAAAGAAAACCTGAAG...GGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS CCA 90 bp CCCCACAGCCTCGTTCAGGACCTGAAAAGCCACTGCCTGAGTCCTTaGGTCCTGCTGGGTGGGATTGTCTCTGATCCTCTGTCCTGTCTA +
Preference number: 5 (lower is better)
Translates to: PHSLVQDLKSHCLSP*VLLGGIVSDPLSCL
Trigger: TAGACAGGACAGAGGATCAGAGACAATCCCACCCAGCAGGACCCAAGGACTCAGGCAGTGGCTTTTCAGGTCCTGAACGAGGCTGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514669.5
CDS-3UTR CAA 90 bp GCTGCCACCCTCCACGTCCCCAGGACAGACGTCGATGGGCAGCGGGCACGCTGGCTTCAGGTTTTCTTTTaGTTGACAGCTAAGCAAACA +
Preference number: 5 (lower is better)
Translates to: AATLHVPRTDVDGQRARWLQVFF*LTAKQT
Trigger: TGTTTGCTTAGCTGTCAACAAAAAGAAAACCTGAAG...CCAGCGTGCCCGCTGCCCATCGACGTCTGTCCTGGGGACGTGGAGGGTGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS GCA 90 bp GGGCCCGAGGGAGCTGTCTGTGTGCAGGAGCCTGCTCTGTCAACGTaGTGGTGGGTTCATGGGGTGAATGTGTACAATGTTTTCCTGTGT +
Preference number: 5 (lower is better)
Translates to: GPEGAVCVQEPALST*WWVHGVNVYNVFLC
Trigger: ACACAGGAAAACATTGTACACATTCACCCCATGAACCCACCAGCACGTTGACAGAGCAGGCTCCTGCACACAGACAGCTCCCTCGGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504784.1
CDS-3UTR CAA 90 bp TTCTGCTTAACGAGGAACGCGAAGGACACAGGGCAGAGCGCCCACAGGACGGACGCTGTCAGATGGTCCTaGTTGACACAGTTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: FCLTRNAKDTGQSAHRTDAVRWS*LTQFFR
Trigger: CCTGAAGAACTGTGTCAACAAGGACCATCTGACAGC...GTCCGTCCTGTGGGCGCTCTGCCCTGTGTCCTTCGCGTTCCTCGTTAAGCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS CCA 90 bp CCCGAGGGAGCTGTCTGTGTGCAGGAGCCTGCTCTGTCAACGTGCTaGTGGGTTCATGGGGTGAATGTGTACAATGTTTTCCTGTGTGCA +
Preference number: 5 (lower is better)
Translates to: PEGAVCVQEPALSTC*WVHGVNVYNVFLCA
Trigger: TGCACACAGGAAAACATTGTACACATTCACCCCATGAACCCACCAGCACGTTGACAGAGCAGGCTCCTGCACACAGACAGCTCCCTCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504784.1
CDS-3UTR CAA 90 bp TTAACGAGGAACGCGAAGGACACAGGGCAGAGCGCCCACAGGACGGACGACGACGACTTGATGTCGATGTaGTCAAAACCACTGCCAATC +
Preference number: 5 (lower is better)
Translates to: LTRNAKDTGQSAHRTDDDDLMSM*SKPLPI
Trigger: GATTGGCAGTGGTTTTGACAACATCGACATCAAGTC...GTCGTCGTCCGTCCTGTGGGCGCTCTGCCCTGTGTCCTTCGCGTTCCTCGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR CAA 90 bp TTCTGCTTAACGAGGAACGCGAAGGACACAGGGCAGAGCGCCCACAGGACGGACATTGTCCTGAGAAGTTaGCCAACTGCCTCATTCTGG +
Preference number: 5 (lower is better)
Translates to: FCLTRNAKDTGQSAHRTDIVLRS*PTASFW
Trigger: CCAGAATGAGGCAGTTGGCAAACTTCTCAGGACAAT...GTCCGTCCTGTGGGCGCTCTGCCCTGTGTCCTTCGCGTTCCTCGTTAAGCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CAA 90 bp GCAGACGCTCCCGGCAGACCACGCGCATTTTTAACATCAGATTTTCTTCCGTCCCCTGGCTTCTGCGTTTaGCGCATCTCCTTGACTGCC +
Preference number: 5 (lower is better)
Translates to: ADAPGRPRAFLTSDFLPSPGFCV*RISLTA
Trigger: GGCAGTCAAGGAGATGCGCAAAACGCAGAAGCCAGG...GGACGGAAGAAAATCTGATGTTAAAAATGCGCGTGGTCTGCCGGGAGCGTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR CAA 90 bp GGTAAACCCGCCCCTCAGTTCCACCGATCAGCTTCGCCGTTTTCTCAGATCCGCTACAGTGTGCACCCCTaGAAACCAGCTTCTTCACTC +
Preference number: 5 (lower is better)
Translates to: GKPAPQFHRSASPFSQIRYSVHP*KPASSL
Trigger: GAGTGAAGAAGCTGGTTTCAAGGGGTGCACACTGTA...GCGGATCTGAGAAAACGGCGAAGCTGATCGGTGGAACTGAGGGGCGGGTTTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS GCA 90 bp TTGTCTCTGATCCTCTGTCCTGTCTACTCTTGGTGGTACCAACACTaGCCAACTGGATCTTCTAGACCTGAGAGGGGGTCCTGGGGTCTG +
Preference number: 5 (lower is better)
Translates to: LSLILCPVYSWWYQH*PTGSSRPERGSWGL
Trigger: CAGACCCCAGGACCCCCTCTCAGGTCTAGAAGATCCAGTTGGGCAGTGTTGGTACCACCAAGAGTAGACAGGACAGAGGATCAGAGACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514669.5
CDS-3UTR CAA 90 bp GCTGGGCACCGCCCAAGCTTTTCCTTTTGGAGCTGCTTCGTGATGCCGTCTTCAGCTGTCAGATGGTCCTaGTTGACACAGTTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: AGHRPSFSFWSCFVMPSSAVRWS*LTQFFR
Trigger: CCTGAAGAACTGTGTCAACAAGGACCATCTGACAGC...TGAAGACGGCATCACGAAGCAGCTCCAAAAGGAAAAGCTTGGGCGGTGCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS CCA 90 bp TCCTGCTGGGTGGGATTGTCTCTGATCCTCTGTCCTGTCTACTCTTaGTGGTACCAACACTGCCCAACTGGATCTTCTAGACCTGAGAGG +
Preference number: 5 (lower is better)
Translates to: SCWVGLSLILCPVYS*WYQHCPTGSSRPER
Trigger: CCTCTCAGGTCTAGAAGATCCAGTTGGGCAGTGTTGGTACCACCAAGAGTAGACAGGACAGAGGATCAGAGACAATCCCACCCAGCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514669.5
CDS-3UTR CAA 90 bp GCTGGGCACCGCCCAAGCTTTTCCTTTTGGAGCTGCTTCGTGATGCCGTCTTCAAAATCCCCGGCCGACTaGATGTCGATGTTGTCAAAA +
Preference number: 5 (lower is better)
Translates to: AGHRPSFSFWSCFVMPSSKSPAD*MSMLSK
Trigger: TTTTGACAACATCGACATCAAGTCGGCCGGGGATTT...TGAAGACGGCATCACGAAGCAGCTCCAAAAGGAAAAGCTTGGGCGGTGCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS CCA 90 bp TGTCTGTGTGCAGGAGCCTGCTCTGTCAACGTGCTGGTGGGTTCATaGGGTGAATGTGTACAATGTTTTCCTGTGTGCACCAAGTCCGAT +
Preference number: 5 (lower is better)
Translates to: CLCAGACSVNVLVGS*GECVQCFPVCTKSD
Trigger: ATCGGACTTGGTGCACACAGGAAAACATTGTACACATTCACCCCATGAACCCACCAGCACGTTGACAGAGCAGGCTCCTGCACACAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504784.1
CDS-3UTR CAA 90 bp AAACTGTACACAGACAAGAACGTTCATGGGAGAATAACTACTGACTTCTTCTGCTTGAAGCCGAAGGCCTaGGCCCGCAGCGCCACTGCC +
Preference number: 5 (lower is better)
Translates to: KLYTDKNVHGRITTDFFCLKPKA*ARSATA
Trigger: GGCAGTGGCGCTGCGGGCCAAGGCCTTCGGCTTCAA...GCAGAAGAAGTCAGTAGTTATTCTCCCATGAACGTTCTTGTCTGTGTACAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR CAA 90 bp GAGCCTGTGGGTCTCCTGAGCAAACAAGAATCAGGAAAGCTGCCCAAAGGCTGCTTTCTTCCGTCCATTTaGGAAAGGGTTTTGCTGTCA +
Preference number: 5 (lower is better)
Translates to: EPVGLLSKQESGKLPKGCFLPSI*ERVLLS
Trigger: TGACAGCAAAACCCTTTCCAAAATGGACGGAAGAAA...GCAGCCTTTGGGCAGCTTTCCTGATTCTTGTTTGCTCAGGAGACCCACAGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR CAA 90 bp AAACTGTACACAGACAAGAACGTTCATGGGAGAATAACTACTGACTTCTTCTGCCTATCCGCCTCGGGCTaGACGGTTTGGCCAGGAGAA +
Preference number: 5 (lower is better)
Translates to: KLYTDKNVHGRITTDFFCLSASG*TVWPGE
Trigger: TTCTCCTGGCCAAACCGTCAAGCCCGAGGCGGATAG...GCAGAAGAAGTCAGTAGTTATTCTCCCATGAACGTTCTTGTCTGTGTACAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS-3UTR CAA 90 bp GCAGACGCTCCCGGCAGACCACGCGCATTTTTAACATCAGATTTTCTTCCGTCCATTTTGGAAAGGGTTTaGCTGTCATCATCACTTCCA +
Preference number: 5 (lower is better)
Translates to: ADAPGRPRAFLTSDFLPSILERV*LSSSLP
Trigger: TGGAAGTGATGATGACAGCAAAACCCTTTCCAAAAT...GGACGGAAGAAAATCTGATGTTAAAAATGCGCGTGGTCTGCCGGGAGCGTCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS-3UTR CAA 90 bp AAACTGTACACAGACAAGAACGTTCATGGGAGAATAACTACTGACTTCTTCTGCAAATCCCCGGCCGACTaGATGTCGATGTTGTCAAAA +
Preference number: 5 (lower is better)
Translates to: KLYTDKNVHGRITTDFFCKSPAD*MSMLSK
Trigger: TTTTGACAACATCGACATCAAGTCGGCCGGGGATTT...GCAGAAGAAGTCAGTAGTTATTCTCCCATGAACGTTCTTGTCTGTGTACAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290921.10
ENST00000382952.8
CDS-3UTR CAA 90 bp AAACTGTACACAGACAAGAACGTTCATGGGAGAATAACTACTGACTTCTTCTGCCTTCAGGTTTTCTTTTaGTTGACAGCTAAGCAAACA +
Preference number: 5 (lower is better)
Translates to: KLYTDKNVHGRITTDFFCLQVFF*LTAKQT
Trigger: TGTTTGCTTAGCTGTCAACAAAAAGAAAACCTGAAG...GCAGAAGAAGTCAGTAGTTATTCTCCCATGAACGTTCTTGTCTGTGTACAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
CDS GCA 72 bp GTCTTACTGCACGGGCCGCGGGCGGGGAGAGCAGACTaGGGCGCTCGCGCACACGCAGCGGCCCGCGCATGC +
Preference number: 6 (lower is better)
Translates to: VLLHGPRAGRAD*GARAHAAARAC
Trigger: GCATGCGCGGGCCGCTGCGTGTGCGCGAGCGCCGCAGTCTGCTCTCCCCGCCCGCGGCCCGTGCAGTAAGAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513420.1
CDS GCA 72 bp CCGCACACACGAAGGGCGCTCACCCTGAGGTTGCAGTaGCAGGCCCGAGGCCGCGCCCCTGTGGCCCCGAGG +
Preference number: 6 (lower is better)
Translates to: PHTRRALTLRLQ*QARGRAPVAPR
Trigger: CCTCGGGGCCACAGGGGCGCGGCCTCGGGCCTGGCACTGCAACCTCAGGGTGAGCGCCCTTCGTGTGTGCGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS CCA 72 bp GCCTCGGGCTTGACGGTTTGGCCAGGAGAAGGGGCGTaGGGCGGGTGGGCCACAGGGGGCAGGCCGTGGGAC +
Preference number: 6 (lower is better)
Translates to: ASGLTVWPGEGA*GGWATGGRPWD
Trigger: GTCCCACGGCCTGCCCCCTGTGGCCCACCCGCCCCACGCCCCTTCTCCTGGCCAAACCGTCAAGCCCGAGGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
ENST00000504092.5
ENST00000514596.1
CDS CCA 72 bp TCGGAGGTCGGACGCCGTCCGAGAGCCGGCGGCACATaGGACCCCGAGAGGAGAAGCGCGCCTGCCCCAGTG +
Preference number: 6 (lower is better)
Translates to: SEVGRRPRAGGT*DPERRSAPAPV
Trigger: CACTGGGGCAGGCGCGCTTCTCCTCTCGGGGTCCCATGTGCCGCCGGCTCTCGGACGGCGTCCGACCTCCGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506180.5
CDS GCA 72 bp GGTCGGACGCCAAGCGGCAGGCCCTTGTTGAGCAAGTaGGAGCTGCCCATCGAGAGGCGCGAGCGGCCGCGG +
Preference number: 6 (lower is better)
Translates to: GRTPSGRPLLSK*ELPIERRERPR
Trigger: CCGCGGCCGCTCGCGCCTCTCGATGGGCAGCTCGCACTTGCTCAACAAGGGCCTGCCGCTTGGCGTCCGACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290921.10
CDS CAA 90 bp CCTGCCCCACGCGACCTGGTGGCGTCAAGACACAGTGTGAGACCCTaGCTCACCCGTGGCCGGGAGGCCGGCCCCGAAAGCCAGGGTCGG +
Preference number: 6 (lower is better)
Translates to: PAPRDLVASRHSVRP*LTRGREAGPESQGR
Trigger: CCGACCCTGGCTTTCGGGGCCGGCCTCCCGGCCACGGGTGAGCAAGGGTCTCACACTGTGTCTTGACGCCACCAGGTCGCGTGGGGCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511907.1
CDS TCA 72 bp CTGCCCCACGCGACCTGGTGGCGTCAAGACACAGTGTaGGACCCTTGCTCACCCGTGGCCGGGAGGCCGGCC +
Preference number: 6 (lower is better)
Translates to: LPHATWWRQDTV*DPCSPVAGRPA
Trigger: GGCCGGCCTCCCGGCCACGGGTGAGCAAGGGTCTCACACTGTGTCTTGACGCCACCAGGTCGCGTGGGGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511907.1
CDS GCA 72 bp GTCCTGGGGTCTGGACATGCCCTGCGGGGGTCGCACTaGACCCGAGGCTCAGCTGGGCACTGGGCAGTCTGC +
Preference number: 6 (lower is better)
Translates to: VLGSGHALRGSH*TRGSAGHWAVC
Trigger: GCAGACTGCCCAGTGCCCAGCTGAGCCTCGGGTGCAGTGCGACCCCCGCAGGGCATGTCCAGACCCCAGGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514669.5
CDS CCA 72 bp GGACATGGCGCTGGGGACGATACCTTCCACAGCAGCTaGGATGCCAGTGGGGGCCACGCCCACCACGCCCGG +
Preference number: 6 (lower is better)
Translates to: GHGAGDDTFHSS*DASGGHAHHAR
Trigger: CCGGGCGTGGTGGGCGTGGCCCCCACTGGCATCCCAGCTGCTGTGGAAGGTATCGTCCCCAGCGCCATGTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000290921.10
ENST00000382950.8
ENST00000382952.8
ENST00000503594.5
ENST00000504092.5
ENST00000514596.1
CDS CCA 72 bp CGAGGGTTTCCGGGCCCTCTGCCCAGGCGCCGAGGCTaGAGAGCTCCTCCCGGGCTACAACTGGTCACTGGC +
Preference number: 6 (lower is better)
Translates to: RGFPGPLPRRRG*RAPPGLQLVTG
Trigger: GCCAGTGACCAGTTGTAGCCCGGGAGGAGCTCTCCAGCCTCGGCGCCTGGGCAGAGGGCCCGGAAACCCTCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
ENST00000504092.5
ENST00000514596.1
CDS CCA 72 bp TGCCCTGCGGGGGTCGCACTGCACCCGAGGCTCAGCTaGGCACTGGGCAGTCTGCCTGGAAACAGGCCCCTG +
Preference number: 6 (lower is better)
Translates to: CPAGVALHPRLS*ALGSLPGNRPL
Trigger: CAGGGGCCTGTTTCCAGGCAGACTGCCCAGTGCCCAGCTGAGCCTCGGGTGCAGTGCGACCCCCGCAGGGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514669.5
CDS GCA 72 bp CGTTCAGGACCAAGCGGCAGGCCCTTGTTGAGCAAGTaGGAGCTGCCCATCGAGAGGCGCGAGCGGCCGCGG +
Preference number: 6 (lower is better)
Translates to: RSGPSGRPLLSK*ELPIERRERPR
Trigger: CCGCGGCCGCTCGCGCCTCTCGATGGGCAGCTCGCACTTGCTCAACAAGGGCCTGCCGCTTGGTCCTGAACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514495.1
CDS CCA 72 bp CGGGGGTCGCACTGCACCCGAGGCTCAGCTGGGCACTaGGCAGTCTGCCTGGAAACAGGCCCCTGCATACGG +
Preference number: 6 (lower is better)
Translates to: RGSHCTRGSAGH*AVCLETGPCIR
Trigger: CCGTATGCAGGGGCCTGTTTCCAGGCAGACTGCCCAGTGCCCAGCTGAGCCTCGGGTGCAGTGCGACCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514669.5
CDS CCA 72 bp CCTCACCCCGCAGCGGGCGGCAAACTCCCCCACTGCTaGCCAGCGAGAGGCCTGAGTACAGGCAAGTGTCCG +
Preference number: 6 (lower is better)
Translates to: PHPAAGGKLPHC*PARGLSTGKCP
Trigger: CGGACACTTGCCTGTACTCAGGCCTCTCGCTGGCCAGCAGTGGGGGAGTTTGCCGCCCGCTGCGGGGTGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511907.1
CDS CAA 72 bp CGCGACCTGGTGGCGTCAAGACACAGTGTGAGACCCTaGCTCACCCGTGGCCGGGAGGCCGGCCCCGAAAGC +
Preference number: 6 (lower is better)
Translates to: RDLVASRHSVRP*LTRGREAGPES
Trigger: GCTTTCGGGGCCGGCCTCCCGGCCACGGGTGAGCAAGGGTCTCACACTGTGTCTTGACGCCACCAGGTCGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511907.1
CDS TCA 72 bp CCACCACGCCCGGAGGGTACCTATAGGCAGCCCCATTaGGCTCAGGGTGCACGACGGCGGGGTCCATGCTGG +
Preference number: 6 (lower is better)
Translates to: PPRPEGTYRQPH*AQGARRRGPCW
Trigger: CCAGCATGGACCCCGCCGTCGTGCACCCTGAGCTCAATGGGGCTGCCTATAGGTACCCTCCGGGCGTGGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000504092.5
ENST00000514596.1
CDS TCA 72 bp CCACGCCCGGAGGGTACCTGCTATAGGCAGCCCCATTaGGCTCAGGGTGCACGACGGCGGGGTCCATGCTGG +
Preference number: 6 (lower is better)
Translates to: PRPEGTCYRQPH*AQGARRRGPCW
Trigger: CCAGCATGGACCCCGCCGTCGTGCACCCTGAGCTCAATGGGGCTGCCTATAGCAGGTACCCTCCGGGCGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382950.8
ENST00000503594.5
CDS CCA 72 bp GGCGCCGAGGCTGGAGAGCTCCTCCCGGGCTACAACTaGTCACTGGCGTGGTCTCTATCCGCCTCGGGCTTG +
Preference number: 6 (lower is better)
Translates to: GAEAGELLPGYN*SLAWSLSASGL
Trigger: CAAGCCCGAGGCGGATAGAGACCACGCCAGTGACCAGTTGTAGCCCGGGAGGAGCTCTCCAGCCTCGGCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
ENST00000504092.5
ENST00000514596.1
CDS TCA 72 bp ACTGGTCACTGGCGTGGTCTCTATCCGCCTCGGGCTTaGCGGTTTGGCCAGGAGAAGGGGCGTGGGGCGGGT +
Preference number: 6 (lower is better)
Translates to: TGHWRGLYPPRA*RFGQEKGRGAG
Trigger: ACCCGCCCCACGCCCCTTCTCCTGGCCAAACCGTCAAGCCCGAGGCGGATAGAGACCACGCCAGTGACCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
ENST00000504092.5
ENST00000514596.1
CDS GCA 72 bp GCCACGGGAGAAGGGGGCCCGAGGGAGCTGTCTGTGTaGAGGAGCCTGCTCTGTCAACGTGCTGGTGGGTTC +
Preference number: 6 (lower is better)
Translates to: ATGEGGPRELSV*RSLLCQRAGGF
Trigger: GAACCCACCAGCACGTTGACAGAGCAGGCTCCTGCACACAGACAGCTCCCTCGGGCCCCCTTCTCCCGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504784.1
CDS GCA 72 bp GGTATTAAGGTCAGAGCCCACGGCAGCCCGTCTCTGTaGCAGCCGCCAGCAAGAGACCGAGGGGCTCCAGGC +
Preference number: 6 (lower is better)
Translates to: GIKVRAHGSPSL*QPPARDRGAPG
Trigger: GCCTGGAGCCCCTCGGTCTCTTGCTGGCGGCTGGCACAGAGACGGGCTGCCGTGGGCTCTGACCTTAATACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514669.5
CDS GCA 72 bp CATCCTCACCCCGCAGCGGGCGGCAAACTCCCCCACTaGTGGCCAGCGAGAGGCCTGAGTACAGGCAAGTGT +
Preference number: 6 (lower is better)
Translates to: HPHPAAGGKLPH*WPARGLSTGKC
Trigger: ACACTTGCCTGTACTCAGGCCTCTCGCTGGCCAGCAGTGGGGGAGTTTGCCGCCCGCTGCGGGGTGAGGATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511907.1
CDS CCA 72 bp TGGCCGGGAGGCCGGCCCCGAAAGCCAGGGTCGGAGTaGCCTCTGTGCCTCAGTTTGACCATCTGCCAAGGA +
Preference number: 6 (lower is better)
Translates to: WPGGRPRKPGSE*PLCLSLTICQG
Trigger: TCCTTGGCAGATGGTCAAACTGAGGCACAGAGGCCACTCCGACCCTGGCTTTCGGGGCCGGCCTCCCGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511907.1
CDS CCA 72 bp GACCTCACTGCATCTGCCACACCCGGGACTGCTGTCTaGGACCTACCTGGACTCGGGGGCCTGCTGACAGCC +
Preference number: 6 (lower is better)
Translates to: DLTASATPGTAV*DLPGLGGLLTA
Trigger: GGCTGTCAGCAGGCCCCCGAGTCCAGGTAGGTCCCAGACAGCAGTCCCGGGTGTGGCAGATGCAGTGAGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS CAA 72 bp GAGTCGGCCGTCTCCTCCACAGACGCCGCGGGCACGTaGCAGACGGCAATGCCTAAATCCCCGGCCGACTTG +
Preference number: 6 (lower is better)
Translates to: ESAVSSTDAAGT*QTAMPKSPADL
Trigger: CAAGTCGGCCGGGGATTTAGGCATTGCCGTCTGCAACGTGCCCGCGGCGTCTGTGGAGGAGACGGCCGACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000505826.5
ENST00000506180.5
ENST00000513420.1
ENST00000514210.5
ENST00000514495.1
ENST00000514669.5
ENST00000515399.5
CDS CAA 72 bp CCCCCACAGCCTCGTTCAGGACCAAGCGGCAGGCCCTaGTTGAGCAAGTGCGAGCTGCCCATCGAGAGGCGC +
Preference number: 6 (lower is better)
Translates to: PPQPRSGPSGRP*LSKCELPIERR
Trigger: GCGCCTCTCGATGGGCAGCTCGCACTTGCTCAACAAGGGCCTGCCGCTTGGTCCTGAACGAGGCTGTGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514495.1
CDS TCA 72 bp CACAGCCTCGTTCAGGACCAAGCGGCAGGCCCTTGTTaGGCAAGTGCGAGCTGCCCATCGAGAGGCGCGAGC +
Preference number: 6 (lower is better)
Translates to: HSLVQDQAAGPC*ASASCPSRGAS
Trigger: GCTCGCGCCTCTCGATGGGCAGCTCGCACTTGCTCAACAAGGGCCTGCCGCTTGGTCCTGAACGAGGCTGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514495.1
CDS GCA 72 bp CTGGGAACAGCACAGGCATGGTCAGTGCAGCCTGAGTaGTGTGGCTGGGTACGGAGGGGAGGTGGCTGGGCA +
Preference number: 6 (lower is better)
Translates to: LGTAQAWSVQPE*CGWVRRGGGWA
Trigger: TGCCCAGCCACCTCCCCTCCGTACCCAGCCACAGCACTCAGGCTGCACTGACCATGCCTGTGCTGTTCCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382950.8
CDS GCA 72 bp CAAAGTCTTACAAGCGGCAGGCCCTTGTTGAGCAAGTaGGAGCTGCCCATCGAGAGGCGCGAGCGGCCGCGG +
Preference number: 6 (lower is better)
Translates to: QSLTSGRPLLSK*ELPIERRERPR
Trigger: CCGCGGCCGCTCGCGCCTCTCGATGGGCAGCTCGCACTTGCTCAACAAGGGCCTGCCGCTTGTAAGACTTTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382952.8
CDS GCA 72 bp CTGCCAAGGATGACACCAGCTGTGGTCAAGCCAAGGTaGCCACGCACGCTCCACACGAGCGCTCCACGTCCG +
Preference number: 6 (lower is better)
Translates to: LPRMTPAVVKPR*PRTLHTSAPRP
Trigger: CGGACGTGGAGCGCTCGTGTGGAGCGTGCGTGGGCACCTTGGCTTGACCACAGCTGGTGTCATCCTTGGCAG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511907.1
CDS CCA 72 bp AGGGGCTGCAGGTCTGGACGGGATGCCATGACTCCATaGCCAGGGCCCATGGGGACCACTCACAGACACTGG +
Preference number: 6 (lower is better)
Translates to: RGCRSGRDAMTP*PGPMGTTHRHW
Trigger: CCAGTGTCTGTGAGTGGTCCCCATGGGCCCTGGCCATGGAGTCATGGCATCCCGTCCAGACCTGCAGCCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511907.1
CDS CAA 72 bp ATGATCGGAGGTCGGACGCCAAGCGGCAGGCCCTTGTaGAGCAAGTGCGAGCTGCCCATCGAGAGGCGCGAG +
Preference number: 6 (lower is better)
Translates to: MIGGRTPSGRPL*SKCELPIERRE
Trigger: CTCGCGCCTCTCGATGGGCAGCTCGCACTTGCTCAACAAGGGCCTGCCGCTTGGCGTCCGACCTCCGATCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290921.10
CDS CAA 72 bp CCACAGCCTCGTTCAGGACCAAGCGGCAGGCCCTTGTaGAGCAAGTGCGAGCTGCCCATCGAGAGGCGCGAG +
Preference number: 6 (lower is better)
Translates to: PQPRSGPSGRPL*SKCELPIERRE
Trigger: CTCGCGCCTCTCGATGGGCAGCTCGCACTTGCTCAACAAGGGCCTGCCGCTTGGTCCTGAACGAGGCTGTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514495.1
CDS CAA 90 bp TCTCCTGGTTGGTCAGGAGCCCTGCCCAAAGAAGGGCTGAGGAGGTaGAGCAGCCCCTCACAGGACCGAGGCAAGGCAGGCCTAGAGCCC +
Preference number: 6 (lower is better)
Translates to: SPGWSGALPKEGLRR*SSPSQDRGKAGLEP
Trigger: GGGCTCTAGGCCTGCCTTGCCTCGGTCCTGTGAGGGGCTGCTCAACCTCCTCAGCCCTTCTTTGGGCAGGGCTCCTGACCAACCAGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511907.1
CDS GCA 72 bp AGAAGTGGACCTCACTGCATCTGCCACACCCGGGACTaGTGTCTGGGACCTACCTGGACTCGGGGGCCTGCT +
Preference number: 6 (lower is better)
Translates to: RSGPHCICHTRD*CLGPTWTRGPA
Trigger: AGCAGGCCCCCGAGTCCAGGTAGGTCCCAGACAGCAGTCCCGGGTGTGGCAGATGCAGTGAGGTCCACTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS CCA 72 bp GGAGAGCTCCTCCCGGGCTACAACTGGTCACTGGCGTaGTCTCTATCCGCCTCGGGCTTGACGGTTTGGCCA +
Preference number: 6 (lower is better)
Translates to: GELLPGYNWSLA*SLSASGLTVWP
Trigger: TGGCCAAACCGTCAAGCCCGAGGCGGATAGAGACCACGCCAGTGACCAGTTGTAGCCCGGGAGGAGCTCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000503594.5
ENST00000504092.5
ENST00000514596.1
CDS CCA 72 bp ACCGAGACCACCCGAAACGTCCGATTCCCCAAACGCTaGCGGGACAAGGACAGCGGTCAGCAGGAGTGGGCT +
Preference number: 6 (lower is better)
Translates to: TETTRNVRFPKR*RDKDSGQQEWA
Trigger: AGCCCACTCCTGCTGACCGCTGTCCTTGTCCCGCCAGCGTTTGGGGAATCGGACGTTTCGGGTGGTCTCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514210.5
CDS CAA 72 bp TTCATGATCGGAGGTCGGACGCCAAGCGGCAGGCCCTaGTTGAGCAAGTGCGAGCTGCCCATCGAGAGGCGC +
Preference number: 6 (lower is better)
Translates to: FMIGGRTPSGRP*LSKCELPIERR
Trigger: GCGCCTCTCGATGGGCAGCTCGCACTTGCTCAACAAGGGCCTGCCGCTTGGCGTCCGACCTCCGATCATGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290921.10
CDS CAA 90 bp GCGGGGTCCATGCTGGCCCAGTGGGTGGCGGCTGTCAGATGGTCCTaGTTGACACAGTTCTTCAGGCTGTCTGGGATCCGGCCTGGGAGA +
Preference number: 6 (lower is better)
Translates to: AGSMLAQWVAAVRWS*LTQFFRLSGIRPGR
Trigger: TCTCCCAGGCCGGATCCCAGACAGCCTGAAGAACTGTGTCAACAAGGACCATCTGACAGCCGCCACCCACTGGGCCAGCATGGACCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514596.1
CDS CAA 90 bp GGGTCCATGCTGGCCCAGTGGGTGGCGGCTGTCAGATGGTCCTTGTaGACACAGTTCTTCAGGCTGTCTGGGATCCGGCCTGGGAGATGC +
Preference number: 6 (lower is better)
Translates to: GSMLAQWVAAVRWSL*TQFFRLSGIRPGRC
Trigger: GCATCTCCCAGGCCGGATCCCAGACAGCCTGAAGAACTGTGTCAACAAGGACCATCTGACAGCCGCCACCCACTGGGCCAGCATGGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514596.1
CDS TCA 72 bp GTCGGGGTCAAAGTCTTACAAGCGGCAGGCCCTTGTTaGGCAAGTGCGAGCTGCCCATCGAGAGGCGCGAGC +
Preference number: 6 (lower is better)
Translates to: VGVKVLQAAGPC*ASASCPSRGAS
Trigger: GCTCGCGCCTCTCGATGGGCAGCTCGCACTTGCTCAACAAGGGCCTGCCGCTTGTAAGACTTTGACCCCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382952.8
ENST00000514210.5
CDS GCA 72 bp TGTCCAAGAACCAGGGGACGGAGGGCACAGGGTGTGTaGTGTGGGCAGGGAAACTGCGGAAAGGCTCTGCCT +
Preference number: 6 (lower is better)
Translates to: CPRTRGRRAQGV*CGQGNCGKALP
Trigger: AGGCAGAGCCTTTCCGCAGTTTCCCTGCCCACAGCACACACCCTGTGCCCTCCGTCCCCTGGTTCTTGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS GCA 72 bp TCCAGGGAACGCCTCAGAAGTGGACCTCACTGCATCTaGCACACCCGGGACTGCTGTCTGGGACCTACCTGG +
Preference number: 6 (lower is better)
Translates to: SRERLRSGPHCI*HTRDCCLGPTW
Trigger: CCAGGTAGGTCCCAGACAGCAGTCCCGGGTGTGGCAGATGCAGTGAGGTCCACTTCTGAGGCGTTCCCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS CCA 72 bp AGAGGGCCCTGGCTAAAGCTGGGAACAGCACAGGCATaGTCAGTGCAGCCTGAGTGCTGTGGCTGGGTACGG +
Preference number: 6 (lower is better)
Translates to: RGPWLKLGTAQA*SVQPECCGWVR
Trigger: CCGTACCCAGCCACAGCACTCAGGCTGCACTGACCATGCCTGTGCTGTTCCCAGCTTTAGCCAGGGCCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382950.8
CDS CAA 72 bp CGTCGGGGTCAAAGTCTTACAAGCGGCAGGCCCTTGTaGAGCAAGTGCGAGCTGCCCATCGAGAGGCGCGAG +
Preference number: 6 (lower is better)
Translates to: RRGQSLTSGRPL*SKCELPIERRE
Trigger: CTCGCGCCTCTCGATGGGCAGCTCGCACTTGCTCAACAAGGGCCTGCCGCTTGTAAGACTTTGACCCCGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382952.8
ENST00000514210.5
CDS CAA 72 bp CTGCGTCGGGGTCAAAGTCTTACAAGCGGCAGGCCCTaGTTGAGCAAGTGCGAGCTGCCCATCGAGAGGCGC +
Preference number: 6 (lower is better)
Translates to: LRRGQSLTSGRP*LSKCELPIERR
Trigger: GCGCCTCTCGATGGGCAGCTCGCACTTGCTCAACAAGGGCCTGCCGCTTGTAAGACTTTGACCCCGACGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382952.8
ENST00000514210.5
CDS GCA 72 bp ACAGACTCCAGGGAACGCCTCAGAAGTGGACCTCACTaGATCTGCCACACCCGGGACTGCTGTCTGGGACCT +
Preference number: 6 (lower is better)
Translates to: TDSRERLRSGPH*ICHTRDCCLGP
Trigger: AGGTCCCAGACAGCAGTCCCGGGTGTGGCAGATGCAGTGAGGTCCACTTCTGAGGCGTTCCCTGGAGTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS CCA 72 bp ACCAGAACTCACAGACTCCAGGGAACGCCTCAGAAGTaGACCTCACTGCATCTGCCACACCCGGGACTGCTG +
Preference number: 6 (lower is better)
Translates to: TRTHRLQGTPQK*TSLHLPHPGLL
Trigger: CAGCAGTCCCGGGTGTGGCAGATGCAGTGAGGTCCACTTCTGAGGCGTTCCCTGGAGTCTGTGAGTTCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510568.1
CDS TCA 72 bp TGGCCTCTGTGCCTCAGTTTGACCATCTGCCAAGGATaGCACCAGCTGTGGTCAAGCCAAGGTGCCCACGCA +
Preference number: 6 (lower is better)
Translates to: WPLCLSLTICQG*HQLWSSQGAHA
Trigger: TGCGTGGGCACCTTGGCTTGACCACAGCTGGTGTCATCCTTGGCAGATGGTCAAACTGAGGCACAGAGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511907.1
CDS CCA 72 bp CTCGTTCAGGACCTGAAAAGCCACTGCCTGAGTCCTTaGGTCCTGCTGGGTGGGATTGTCTCTGATCCTCTG +
Preference number: 6 (lower is better)
Translates to: LVQDLKSHCLSP*VLLGGIVSDPL
Trigger: CAGAGGATCAGAGACAATCCCACCCAGCAGGACCCAAGGACTCAGGCAGTGGCTTTTCAGGTCCTGAACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514669.5
CDS CAA 72 bp ACGCGACCTAAATCCCCGGCCGACTTGATGTCGATGTaGTCAAAACCACTGCCAATCCGGACGATGATGCGG +
Preference number: 6 (lower is better)
Translates to: TRPKSPADLMSM*SKPLPIRTMMR
Trigger: CCGCATCATCGTCCGGATTGGCAGTGGTTTTGACAACATCGACATCAAGTCGGCCGGGGATTTAGGTCGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504092.5
CDS CAA 90 bp TTGCAGACGGCAATGCCTAAATCCCCGGCCGACTTGATGTCGATGTaGTCAAAACCACTGCCAATCCGGACGATGATGCGGAGGGCTTTG +
Preference number: 6 (lower is better)
Translates to: LQTAMPKSPADLMSM*SKPLPIRTMMRRAL
Trigger: CAAAGCCCTCCGCATCATCGTCCGGATTGGCAGTGGTTTTGACAACATCGACATCAAGTCGGCCGGGGATTTAGGCATTGCCGTCTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000505826.5
ENST00000506180.5
ENST00000513420.1
ENST00000514210.5
ENST00000514495.1
ENST00000514669.5
ENST00000515399.5
CDS TCA 72 bp CGTTGCAGACGGCAATGCCTAAATCCCCGGCCGACTTaGTGTCGATGTTGTCAAAACCACTGCCAATCCGGA +
Preference number: 6 (lower is better)
Translates to: RCRRQCLNPRPT*CRCCQNHCQSG
Trigger: TCCGGATTGGCAGTGGTTTTGACAACATCGACATCAAGTCGGCCGGGGATTTAGGCATTGCCGTCTGCAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000505826.5
ENST00000506180.5
ENST00000513420.1
ENST00000514210.5
ENST00000514495.1
ENST00000514669.5
ENST00000515399.5
CDS GCA 72 bp GGAGCTGTCTGTGTGCAGGAGCCTGCTCTGTCAACGTaGTGGTGGGTTCATGGGGTGAATGTGTACAATGTT +
Preference number: 6 (lower is better)
Translates to: GAVCVQEPALST*WWVHGVNVYNV
Trigger: AACATTGTACACATTCACCCCATGAACCCACCAGCACGTTGACAGAGCAGGCTCCTGCACACAGACAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504784.1
CDS GCA 72 bp ATCCTCTGTCCTGTCTACTCTTGGTGGTACCAACACTaGCCAACTGGATCTTCTAGACCTGAGAGGGGGTCC +
Preference number: 6 (lower is better)
Translates to: ILCPVYSWWYQH*PTGSSRPERGS
Trigger: GGACCCCCTCTCAGGTCTAGAAGATCCAGTTGGGCAGTGTTGGTACCACCAAGAGTAGACAGGACAGAGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514669.5
CDS CAA 72 bp GCAATGCCTAAATCCCCGGCCGACTTGATGTCGATGTaGTCAAAACCACTGCCAATCCGGACGATGATGCGG +
Preference number: 6 (lower is better)
Translates to: AMPKSPADLMSM*SKPLPIRTMMR
Trigger: CCGCATCATCGTCCGGATTGGCAGTGGTTTTGACAACATCGACATCAAGTCGGCCGGGGATTTAGGCATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000505826.5
ENST00000506180.5
ENST00000513420.1
ENST00000514210.5
ENST00000514495.1
ENST00000514669.5
ENST00000515399.5
CDS CAA 72 bp ACGTTGCAGACGGCAATGCCTAAATCCCCGGCCGACTaGATGTCGATGTTGTCAAAACCACTGCCAATCCGG +
Preference number: 6 (lower is better)
Translates to: TLQTAMPKSPAD*MSMLSKPLPIR
Trigger: CCGGATTGGCAGTGGTTTTGACAACATCGACATCAAGTCGGCCGGGGATTTAGGCATTGCCGTCTGCAACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000290921.10
ENST00000382952.8
ENST00000505826.5
ENST00000506180.5
ENST00000513420.1
ENST00000514210.5
ENST00000514495.1
ENST00000514669.5
ENST00000515399.5
CDS TCA 72 bp AGCCTGCTCTGTCAACGTGCTGGTGGGTTCATGGGGTaGATGTGTACAATGTTTTCCTGTGTGCACCAAGTC +
Preference number: 6 (lower is better)
Translates to: SLLCQRAGGFMG*MCTMFSCVHQV
Trigger: GACTTGGTGCACACAGGAAAACATTGTACACATTCACCCCATGAACCCACCAGCACGTTGACAGAGCAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504784.1
CDS CCA 72 bp GTGGGATTGTCTCTGATCCTCTGTCCTGTCTACTCTTaGTGGTACCAACACTGCCCAACTGGATCTTCTAGA +
Preference number: 6 (lower is better)
Translates to: VGLSLILCPVYS*WYQHCPTGSSR
Trigger: TCTAGAAGATCCAGTTGGGCAGTGTTGGTACCACCAAGAGTAGACAGGACAGAGGATCAGAGACAATCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514669.5