Pregenerated sensors for CT69 (Homo sapiens)
Ensembl gene IDs: ENSG00000231971Ensembl transcript IDs: ENST00000417483.5, ENST00000422736.2, ENST00000653974.1, ENST00000655225.1, ENST00000656511.1, ENST00000657570.1, ENST00000659858.1, ENST00000660051.1, ENST00000661465.1, ENST00000664953.1, ENST00000667818.1, ENST00000668601.1
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | ACCCCAGAGATGGATGGAGGCTGGCAGGGATTCGCCTTCATCCTGTaGTTCAGCAATGCAGGCTCCTCCACCCGTGGTAGCGCCGTGTCA | + |
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Preference number: 5 (lower is better) Translates to: TPEMDGGWQGFAFIL*FSNAGSSTRGSAVS Trigger: TGACACGGCGCTACCACGGGTGGAGGAGCCTGCATTGCTGAATCACAGGATGAAGGCGAATCCCTGCCAGCCTCCATCCATCTCTGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000417483.5 ENST00000422736.2 ENST00000655225.1 ENST00000656511.1 ENST00000657570.1 ENST00000659858.1 ENST00000660051.1 ENST00000661465.1 ENST00000667818.1 ENST00000668601.1 |
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| CDS GCA 90 bp | AATCCCACGCAGTCAGTGCTCCTTTGGACCTGCCTCGGGCATCGCTaGTTCTCTTGTCGGCAAGTTGCCGAAGGATCCTTCCCTAGGCGG | + |
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Preference number: 5 (lower is better) Translates to: NPTQSVLLWTCLGHR*FSCRQVAEGSFPRR Trigger: CCGCCTAGGGAAGGATCCTTCGGCAACTTGCCGACAAGAGAAGCAGCGATGCCCGAGGCAGGTCCAAAGGAGCACTGACTGCGTGGGATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000417483.5 ENST00000653974.1 ENST00000657570.1 ENST00000660051.1 ENST00000664953.1 |
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| CDS GCA 90 bp | TCCACCCGTGGTAGCGCCGTGTCAATACGTAGCTTCTCAGGTCACTaGCTCTTATTTGCTTCAGGGTCCTGCATGTGGCTGGCTGGCCGA | + |
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Preference number: 5 (lower is better) Translates to: STRGSAVSIRSFSGH*LLFASGSCMWLAGR Trigger: TCGGCCAGCCAGCCACATGCAGGACCCTGAAGCAAATAAGAGGCAGTGACCTGAGAAGCTACGTATTGACACGGCGCTACCACGGGTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656511.1 |
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| CDS TCA 90 bp | GCCCAGGCAACTGTGAACGACAGCCCTTTCCAGAGGACCTCAGAATaGCAGGGGCATGTCACAGCACCTTCCTTTCTTCCAAGAAATGCC | + |
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Preference number: 5 (lower is better) Translates to: AQATVNDSPFQRTSE*QGHVTAPSFLPRNA Trigger: GGCATTTCTTGGAAGAAAGGAAGGTGCTGTGACATGCCCCTGTCATTCTGAGGTCCTCTGGAAAGGGCTGTCGTTCACAGTTGCCTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000422736.2 ENST00000668601.1 |
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| CDS GCA 90 bp | TTAACGGCATGTTTTGAGTCACCAAACGTGCGTCCTGCTCAGCCTTaGCCAGGCAACTGTGAACGACAGCCCTTTCCAGAGGACCTCAGA | + |
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Preference number: 5 (lower is better) Translates to: LTACFESPNVRPAQP*PGNCERQPFPEDLR Trigger: TCTGAGGTCCTCTGGAAAGGGCTGTCGTTCACAGTTGCCTGGGCAAGGCTGAGCAGGACGCACGTTTGGTGACTCAAAACATGCCGTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000422736.2 ENST00000668601.1 |
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| CDS CCA 90 bp | TTTTGTTCCTCCAGTGTAATCAATCCCACGCAGTCAGTGCTCCTTTaGACCTGCCTCGGGCATCGCTGCTTCTCTTGTCGGCAAGTTGCC | + |
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Preference number: 5 (lower is better) Translates to: FCSSSVINPTQSVLL*TCLGHRCFSCRQVA Trigger: GGCAACTTGCCGACAAGAGAAGCAGCGATGCCCGAGGCAGGTCCAAAGGAGCACTGACTGCGTGGGATTGATTACACTGGAGGAACAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000417483.5 ENST00000653974.1 ENST00000657570.1 ENST00000660051.1 ENST00000664953.1 |
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| CDS GCA 90 bp | TCCACCCGTGGTAGCGCCGTGTCAATACGTAGCTTCTCAGGTCACTaGCCGTGTCCATGTATTCTCATTGTTCAACTCCCACTTATGAGT | + |
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Preference number: 5 (lower is better) Translates to: STRGSAVSIRSFSGH*PCPCILIVQLPLMS Trigger: ACTCATAAGTGGGAGTTGAACAATGAGAATACATGGACACGGGCAGTGACCTGAGAAGCTACGTATTGACACGGCGCTACCACGGGTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000661465.1 ENST00000667818.1 ENST00000668601.1 |
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| CDS CCA 90 bp | CTCAGGTCACCTCTTATTTGCTTCAGGGTCCTGCATGTGGCTGGCTaGCCGAGCTTTAAGAGTAGGGTTTGGGTAATATCTGCTTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: LRSPLICFRVLHVAG*PSFKSRVWVISASE Trigger: CTCAGAAGCAGATATTACCCAAACCCTACTCTTAAAGCTCGGCCAGCCAGCCACATGCAGGACCCTGAAGCAAATAAGAGGTGACCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655225.1 |
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| CDS CCA 90 bp | AGGTCACTGCCTCTTATTTGCTTCAGGGTCCTGCATGTGGCTGGCTaGCCGAGCTTTAAGAGTAGGGTTTGGGTAATATCTGCTTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: RSLPLICFRVLHVAG*PSFKSRVWVISASE Trigger: CTCAGAAGCAGATATTACCCAAACCCTACTCTTAAAGCTCGGCCAGCCAGCCACATGCAGGACCCTGAAGCAAATAAGAGGCAGTGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656511.1 |
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| CDS GCA 90 bp | TCCACCCGTGGTAGCGCCGTGTCAATACGTAGCTTCTCAGGTCACTaGTGGAAGTGTTGTGTAAATTTTTCCGTAAAGACTGGACTTGGC | + |
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Preference number: 5 (lower is better) Translates to: STRGSAVSIRSFSGH*WKCCVNFSVKTGLG Trigger: GCCAAGTCCAGTCTTTACGGAAAAATTTACACAACACTTCCAGCAGTGACCTGAGAAGCTACGTATTGACACGGCGCTACCACGGGTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000417483.5 |
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| CDS CCA 90 bp | AGGGTCCTGCATGTGGCTGGCTGGCCGAGCTTTAAGAGTAGGGTTTaGGTAATATCTGCTTCTGAGCCATGTTTCAGGACTGTGGATATT | + |
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Preference number: 5 (lower is better) Translates to: RVLHVAGWPSFKSRV*VISASEPCFRTVDI Trigger: AATATCCACAGTCCTGAAACATGGCTCAGAAGCAGATATTACCCAAACCCTACTCTTAAAGCTCGGCCAGCCAGCCACATGCAGGACCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655225.1 ENST00000656511.1 |
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| CDS GCA 90 bp | ATGACGGTTTCCAGCTTCATCCATGTCCCTGCAGAGGGACATGGCTaGATAGTATTCCAAAAGCCCTTCCTCATTATTCTGATGCAGGCA | + |
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Preference number: 5 (lower is better) Translates to: MTVSSFIHVPAEGHG*IVFQKPFLIILMQA Trigger: TGCCTGCATCAGAATAATGAGGAAGGGCTTTTGGAATACTATGCAGCCATGTCCCTCTGCAGGGACATGGATGAAGCTGGAAACCGTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000661465.1 ENST00000667818.1 ENST00000668601.1 |
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| CDS CCA 90 bp | ACCCGTGGTAGCGCCGTGTCAATACGTAGCTTCTCAGGTCACTGCTaGAAGTGTTGTGTAAATTTTTCCGTAAAGACTGGACTTGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: TRGSAVSIRSFSGHC*KCCVNFSVKTGLGF Trigger: GAAGCCAAGTCCAGTCTTTACGGAAAAATTTACACAACACTTCCAGCAGTGACCTGAGAAGCTACGTATTGACACGGCGCTACCACGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000417483.5 |
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| CDS TCA 90 bp | AAGAATGGAAAGTTGCACCAGCTCTTAACAGCCTCAACTCAGAGATaGCACGTGTCTCTTCTGCTCCCAATCCCTCAGCCAGAATTAGTA | + |
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Preference number: 5 (lower is better) Translates to: KNGKLHQLLTASTQR*HVSLLLPIPQPELV Trigger: TACTAATTCTGGCTGAGGGATTGGGAGCAGAAGAGACACGTGTCATCTCTGAGTTGAGGCTGTTAAGAGCTGGTGCAACTTTCCATTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657570.1 ENST00000659858.1 |
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| CDS GCA 90 bp | AGAATGACAGGGGCATGTCACAGCACCTTCCTTTCTTCCAAGAAATaGCAGGTCACAGGGGGTGTTCACTTATTCTCAAGTGACATTCTT | + |
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Preference number: 5 (lower is better) Translates to: RMTGACHSTFLSSKK*QVTGGVHLFSSDIL Trigger: AAGAATGTCACTTGAGAATAAGTGAACACCCCCTGTGACCTGGCATTTCTTGGAAGAAAGGAAGGTGCTGTGACATGCCCCTGTCATTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000422736.2 ENST00000668601.1 |
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| CDS TCA 90 bp | GTGAAGATTATTTGTGCATCATTTAGTCTGCATTTATTCATCTTGTaGGCTGAGGATTCTGCTAAGCACCCCAGAGATGGATGGAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: VKIICASFSLHLFIL*AEDSAKHPRDGWRL Trigger: CAGCCTCCATCCATCTCTGGGGTGCTTAGCAGAATCCTCAGCTCACAAGATGAATAAATGCAGACTAAATGATGCACAAATAATCTTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000417483.5 ENST00000422736.2 ENST00000655225.1 ENST00000656511.1 ENST00000657570.1 ENST00000659858.1 ENST00000660051.1 ENST00000661465.1 ENST00000667818.1 ENST00000668601.1 |
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| CDS CCA 90 bp | TTCCAGGTAATTGTGTTATTTTGGTCTTCAAGGCCCTGTGGTACTTaGAAGCAATTCCTTAATAGTCAAACAAGGGCACATTGCCAGGTT | + |
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Preference number: 5 (lower is better) Translates to: FQVIVLFWSSRPCGT*KQFLNSQTRAHCQV Trigger: AACCTGGCAATGTGCCCTTGTTTGACTATTAAGGAATTGCTTCCAAGTACCACAGGGCCTTGAAGACCAAAATAACACAATTACCTGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000422736.2 ENST00000656511.1 ENST00000668601.1 |
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| CDS TCA 90 bp | GGATCTGGCCGTCCTGCAGTCTTTCCATGTGTTGATGGTTGTGTGTaGAGATTATTTGTGCATCATTTAGTCTGCATTTATTCATCTTGT | + |
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Preference number: 5 (lower is better) Translates to: GSGRPAVFPCVDGCV*RLFVHHLVCIYSSC Trigger: ACAAGATGAATAAATGCAGACTAAATGATGCACAAATAATCTTCACACACAACCATCAACACATGGAAAGACTGCAGGACGGCCAGATCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000417483.5 ENST00000422736.2 ENST00000653974.1 ENST00000655225.1 ENST00000656511.1 ENST00000657570.1 ENST00000659858.1 ENST00000660051.1 ENST00000661465.1 ENST00000667818.1 ENST00000668601.1 |
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| CDS TCA 90 bp | CTTGCTCTGTATTGCTCCAAAGAGGCCAATATTTTGAAATTCCAATaGGGTAGGCTCAAAATGAAACATCCTGAACATCTGAGCTGTCCA | + |
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Preference number: 5 (lower is better) Translates to: LALYCSKEANILKFQ*GRLKMKHPEHLSCP Trigger: TGGACAGCTCAGATGTTCAGGATGTTTCATTTTGAGCCTACCTCATTGGAATTTCAAAATATTGGCCTCTTTGGAGCAATACAGAGCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000655225.1 ENST00000656511.1 |
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| CDS CCA 90 bp | CCTGATAAGTTGCCATTGTTCACCTTCCAGGTAATTGTGTTATTTTaGTCTTCAAGGCCCTGTGGTACTTGGAAGCAATTCCTTAATAGT | + |
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Preference number: 5 (lower is better) Translates to: PDKLPLFTFQVIVLF*SSRPCGTWKQFLNS Trigger: ACTATTAAGGAATTGCTTCCAAGTACCACAGGGCCTTGAAGACCAAAATAACACAATTACCTGGAAGGTGAACAATGGCAACTTATCAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000422736.2 ENST00000656511.1 ENST00000668601.1 |
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| CDS GCA 72 bp | CAGTCAGTGCTCCTTTGGACCTGCCTCGGGCATCGCTaGTTCTCTTGTCGGCAAGTTGCCGAAGGATCCTTC | + |
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Preference number: 6 (lower is better) Translates to: QSVLLWTCLGHR*FSCRQVAEGSF Trigger: GAAGGATCCTTCGGCAACTTGCCGACAAGAGAAGCAGCGATGCCCGAGGCAGGTCCAAAGGAGCACTGACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000417483.5 ENST00000653974.1 ENST00000657570.1 ENST00000660051.1 ENST00000664953.1 |
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| CDS CAA 72 bp | CCTGCCTCGGGCATCGCTGCTTCTCTTGTCGGCAAGTaGCCGAAGGATCCTTCCCTAGGCGGAGATCAGTTA | + |
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Preference number: 6 (lower is better) Translates to: PASGIAASLVGK*PKDPSLGGDQL Trigger: TAACTGATCTCCGCCTAGGGAAGGATCCTTCGGCAACTTGCCGACAAGAGAAGCAGCGATGCCCGAGGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000417483.5 ENST00000653974.1 ENST00000657570.1 ENST00000660051.1 ENST00000664953.1 |
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| CDS CAA 90 bp | TCCTTTGGACCTGCCTCGGGCATCGCTGCTTCTCTTGTCGGCAAGTaGCCGAAGGATCCTTCCCTAGGCGGAGATCAGTTAGACCACTTG | + |
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Preference number: 6 (lower is better) Translates to: SFGPASGIAASLVGK*PKDPSLGGDQLDHL Trigger: CAAGTGGTCTAACTGATCTCCGCCTAGGGAAGGATCCTTCGGCAACTTGCCGACAAGAGAAGCAGCGATGCCCGAGGCAGGTCCAAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000417483.5 ENST00000653974.1 ENST00000657570.1 ENST00000660051.1 ENST00000664953.1 |
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| CDS GCA 72 bp | TGTTTTGAGTCACCAAACGTGCGTCCTGCTCAGCCTTaGCCAGGCAACTGTGAACGACAGCCCTTTCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: CFESPNVRPAQP*PGNCERQPFPE Trigger: CTCTGGAAAGGGCTGTCGTTCACAGTTGCCTGGGCAAGGCTGAGCAGGACGCACGTTTGGTGACTCAAAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000422736.2 ENST00000668601.1 |
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| CDS CCA 72 bp | GGTCACTGCCTCTTATTTGCTTCAGGGTCCTGCATGTaGCTGGCTGGCCGAGCTTTAAGAGTAGGGTTTGGG | + |
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Preference number: 6 (lower is better) Translates to: GHCLLFASGSCM*LAGRALRVGFG Trigger: CCCAAACCCTACTCTTAAAGCTCGGCCAGCCAGCCACATGCAGGACCCTGAAGCAAATAAGAGGCAGTGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656511.1 |
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| CDS CAA 90 bp | CTTTTGTTCCTCCAGTGTAATCAATCCCACGCAGTCAGTGCTCCTTaGGACCTGCCTCGGGCATCGCTGCTTCTCTTGTCGGCAAGTTGC | + |
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Preference number: 6 (lower is better) Translates to: LLFLQCNQSHAVSAP*DLPRASLLLLSASC Trigger: GCAACTTGCCGACAAGAGAAGCAGCGATGCCCGAGGCAGGTCCAAAGGAGCACTGACTGCGTGGGATTGATTACACTGGAGGAACAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000417483.5 ENST00000653974.1 ENST00000657570.1 ENST00000660051.1 ENST00000664953.1 |
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| CDS GCA 72 bp | TTCTCAGGTCACTGCCTCTTATTTGCTTCAGGGTCCTaGATGTGGCTGGCTGGCCGAGCTTTAAGAGTAGGG | + |
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Preference number: 6 (lower is better) Translates to: FSGHCLLFASGS*MWLAGRALRVG Trigger: CCCTACTCTTAAAGCTCGGCCAGCCAGCCACATGCAGGACCCTGAAGCAAATAAGAGGCAGTGACCTGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656511.1 |
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| CDS CCA 72 bp | TCAGGTCACCTCTTATTTGCTTCAGGGTCCTGCATGTaGCTGGCTGGCCGAGCTTTAAGAGTAGGGTTTGGG | + |
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Preference number: 6 (lower is better) Translates to: SGHLLFASGSCM*LAGRALRVGFG Trigger: CCCAAACCCTACTCTTAAAGCTCGGCCAGCCAGCCACATGCAGGACCCTGAAGCAAATAAGAGGTGACCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655225.1 |
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| CDS TCA 72 bp | ACTGTGAACGACAGCCCTTTCCAGAGGACCTCAGAATaGCAGGGGCATGTCACAGCACCTTCCTTTCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: TVNDSPFQRTSE*QGHVTAPSFLP Trigger: TGGAAGAAAGGAAGGTGCTGTGACATGCCCCTGTCATTCTGAGGTCCTCTGGAAAGGGCTGTCGTTCACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000422736.2 ENST00000668601.1 |
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| CDS TCA 72 bp | CATCGTTCCACCCTAGTTACTCTTAACGGCATGTTTTaGGTCACCAAACGTGCGTCCTGCTCAGCCTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: HRSTLVTLNGMF*VTKRASCSALP Trigger: GGGCAAGGCTGAGCAGGACGCACGTTTGGTGACTCAAAACATGCCGTTAAGAGTAACTAGGGTGGAACGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000422736.2 ENST00000668601.1 |
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| CDS CAA 72 bp | AAGGATCCTTCCCTAGGCGGAGATCAGTTAGACCACTaGCATCGCATAGGCCAGGTTGTGGAGAAGGAGACT | + |
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Preference number: 6 (lower is better) Translates to: KDPSLGGDQLDH*HRIGQVVEKET Trigger: AGTCTCCTTCTCCACAACCTGGCCTATGCGATGCAAGTGGTCTAACTGATCTCCGCCTAGGGAAGGATCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000417483.5 ENST00000653974.1 ENST00000657570.1 ENST00000660051.1 ENST00000664953.1 |
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| CDS CAA 90 bp | AAGTTGCCGAAGGATCCTTCCCTAGGCGGAGATCAGTTAGACCACTaGCATCGCATAGGCCAGGTTGTGGAGAAGGAGACTGGAAACAGA | + |
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Preference number: 6 (lower is better) Translates to: KLPKDPSLGGDQLDH*HRIGQVVEKETGNR Trigger: TCTGTTTCCAGTCTCCTTCTCCACAACCTGGCCTATGCGATGCAAGTGGTCTAACTGATCTCCGCCTAGGGAAGGATCCTTCGGCAACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000417483.5 ENST00000653974.1 ENST00000657570.1 ENST00000660051.1 ENST00000664953.1 |
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| CDS TCA 72 bp | GGCTTGAGCCACAGCGCCCAGTTGAGTTCTGAATGTTaGGGCTCCTCAGATTTCAGTTTGGACCTCTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: GLSHSAQLSSEC*GSSDFSLDLSS Trigger: AGAAGAGAGGTCCAAACTGAAATCTGAGGAGCCTCAACATTCAGAACTCAACTGGGCGCTGTGGCTCAAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655225.1 |
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| CDS TCA 72 bp | AAGTTGCACCAGCTCTTAACAGCCTCAACTCAGAGATaGCACGTGTCTCTTCTGCTCCCAATCCCTCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: KLHQLLTASTQR*HVSLLLPIPQP Trigger: TGGCTGAGGGATTGGGAGCAGAAGAGACACGTGTCATCTCTGAGTTGAGGCTGTTAAGAGCTGGTGCAACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657570.1 ENST00000659858.1 |
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| CDS GCA 72 bp | GCTGAGAATGACGGTTTCCAGCTTCATCCATGTCCCTaGAGAGGGACATGGCTGCATAGTATTCCAAAAGCC | + |
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Preference number: 6 (lower is better) Translates to: AENDGFQLHPCP*RGTWLHSIPKA Trigger: GGCTTTTGGAATACTATGCAGCCATGTCCCTCTGCAGGGACATGGATGAAGCTGGAAACCGTCATTCTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000661465.1 ENST00000667818.1 ENST00000668601.1 |
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| CDS GCA 72 bp | GGTAGCGCCGTGTCAATACGTAGCTTCTCAGGTCACTaGCCGTGTCCATGTATTCTCATTGTTCAACTCCCA | + |
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Preference number: 6 (lower is better) Translates to: GSAVSIRSFSGH*PCPCILIVQLP Trigger: TGGGAGTTGAACAATGAGAATACATGGACACGGGCAGTGACCTGAGAAGCTACGTATTGACACGGCGCTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000661465.1 ENST00000667818.1 ENST00000668601.1 |
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| CDS CCA 72 bp | CATGTGGCTGGCTGGCCGAGCTTTAAGAGTAGGGTTTaGGTAATATCTGCTTCTGAGCCATGTTTCAGGACT | + |
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Preference number: 6 (lower is better) Translates to: HVAGWPSFKSRV*VISASEPCFRT Trigger: AGTCCTGAAACATGGCTCAGAAGCAGATATTACCCAAACCCTACTCTTAAAGCTCGGCCAGCCAGCCACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655225.1 ENST00000656511.1 |
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| CDS GCA 72 bp | TCCAGCTTCATCCATGTCCCTGCAGAGGGACATGGCTaGATAGTATTCCAAAAGCCCTTCCTCATTATTCTG | + |
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Preference number: 6 (lower is better) Translates to: SSFIHVPAEGHG*IVFQKPFLIIL Trigger: CAGAATAATGAGGAAGGGCTTTTGGAATACTATGCAGCCATGTCCCTCTGCAGGGACATGGATGAAGCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000661465.1 ENST00000667818.1 ENST00000668601.1 |
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| CDS TCA 72 bp | CTCATTATTCTGATGCAGGCACTGGTCTGTAGGGTTTaGAAAGCATTGCTTAGAGGACAAGGAGGTAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: LIILMQALVCRV*KALLRGQGGRR Trigger: CCTTCTACCTCCTTGTCCTCTAAGCAATGCTTTTCAAACCCTACAGACCAGTGCCTGCATCAGAATAATGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000661465.1 ENST00000667818.1 ENST00000668601.1 |
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| CDS GCA 72 bp | GGTAGCGCCGTGTCAATACGTAGCTTCTCAGGTCACTaGTGGAAGTGTTGTGTAAATTTTTCCGTAAAGACT | + |
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Preference number: 6 (lower is better) Translates to: GSAVSIRSFSGH*WKCCVNFSVKT Trigger: AGTCTTTACGGAAAAATTTACACAACACTTCCAGCAGTGACCTGAGAAGCTACGTATTGACACGGCGCTACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000417483.5 |
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| CDS TCA 72 bp | TCCAATGGAAGACATGCAGGGAGCTTTTCATCTACTTaGAGGAACAGACTTGCTCTGTATTGCTCCAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: SNGRHAGSFSST*RNRLALYCSKE Trigger: CTCTTTGGAGCAATACAGAGCAAGTCTGTTCCTTCAAGTAGATGAAAAGCTCCCTGCATGTCTTCCATTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000655225.1 ENST00000656511.1 |
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| CDS CCA 72 bp | TTGCCATTGTTCACCTTCCAGGTAATTGTGTTATTTTaGTCTTCAAGGCCCTGTGGTACTTGGAAGCAATTC | + |
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Preference number: 6 (lower is better) Translates to: LPLFTFQVIVLF*SSRPCGTWKQF Trigger: GAATTGCTTCCAAGTACCACAGGGCCTTGAAGACCAAAATAACACAATTACCTGGAAGGTGAACAATGGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000422736.2 ENST00000656511.1 ENST00000668601.1 |
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| CDS CCA 72 bp | GATACGAAACTGTTGAACAACCATATGACTTCCTGGTaGAAGGTGGAAACCCAGCATTCAGATGATCATTTG | + |
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Preference number: 6 (lower is better) Translates to: DTKLLNNHMTSW*KVETQHSDDHL Trigger: CAAATGATCATCTGAATGCTGGGTTTCCACCTTCCACCAGGAAGTCATATGGTTGTTCAACAGTTTCGTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000659858.1 ENST00000660051.1 ENST00000661465.1 |
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| CDS CAA 72 bp | GTTGCCATTGTTCACCTTCCAGGTAATTGTGTTATTTaGGTCTTCAAGGCCCTGTGGTACTTGGAAGCAATT | + |
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Preference number: 6 (lower is better) Translates to: VAIVHLPGNCVI*VFKALWYLEAI Trigger: AATTGCTTCCAAGTACCACAGGGCCTTGAAGACCAAAATAACACAATTACCTGGAAGGTGAACAATGGCAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000422736.2 ENST00000656511.1 ENST00000668601.1 |
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| CDS TCA 72 bp | TCCATGTATTCTCATTGTTCAACTCCCACTTATGAGTaGGGACATGTGGTGTTTGGTTTTCTGTTCTTATGT | + |
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Preference number: 6 (lower is better) Translates to: SMYSHCSTPTYE*GHVVFGFLFLC Trigger: ACATAAGAACAGAAAACCAAACACCACATGTCCTCACTCATAAGTGGGAGTTGAACAATGAGAATACATGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000661465.1 ENST00000667818.1 ENST00000668601.1 |
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| CDS TCA 72 bp | TATTGCTCCAAAGAGGCCAATATTTTGAAATTCCAATaGGGTAGGCTCAAAATGAAACATCCTGAACATCTG | + |
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Preference number: 6 (lower is better) Translates to: YCSKEANILKFQ*GRLKMKHPEHL Trigger: CAGATGTTCAGGATGTTTCATTTTGAGCCTACCTCATTGGAATTTCAAAATATTGGCCTCTTTGGAGCAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000655225.1 ENST00000656511.1 |
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| CDS GCA 72 bp | GAGGAATATTTAAACACAAATCTTGTTTCAGGAAAGTaGTCCATAGAAAGTAAGTTGCGGAAAGTACCAGAG | + |
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Preference number: 6 (lower is better) Translates to: EEYLNTNLVSGK*SIESKLRKVPE Trigger: CTCTGGTACTTTCCGCAACTTACTTTCTATGGAGCACTTTCCTGAAACAAGATTTGTGTTTAAATATTCCTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000422736.2 ENST00000656511.1 ENST00000668601.1 |
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| CDS CAA 72 bp | TTAATAGTCAAACAAGGGCACATTGCCAGGTTTCCATaGTCAACGTTGCAGAACTTACTACTGTTTAATACT | + |
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Preference number: 6 (lower is better) Translates to: LIVKQGHIARFP*STLQNLLLFNT Trigger: AGTATTAAACAGTAGTAAGTTCTGCAACGTTGACAATGGAAACCTGGCAATGTGCCCTTGTTTGACTATTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000422736.2 ENST00000656511.1 ENST00000668601.1 |
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| CDS CAA 72 bp | CTTTTCATCTACTTGAAGGAACAGACTTGCTCTGTATaGCTCCAAAGAGGCCAATATTTTGAAATTCCAATG | + |
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Preference number: 6 (lower is better) Translates to: LFIYLKEQTCSV*LQRGQYFEIPM Trigger: CATTGGAATTTCAAAATATTGGCCTCTTTGGAGCAATACAGAGCAAGTCTGTTCCTTCAAGTAGATGAAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000655225.1 ENST00000656511.1 |
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| CDS CAA 72 bp | AATCTTGTTTCAGGAAAGTGCTCCATAGAAAGTAAGTaGCGGAAAGTACCAGAGTCATTTCTATCAAAAGAT | + |
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Preference number: 6 (lower is better) Translates to: NLVSGKCSIESK*RKVPESFLSKD Trigger: ATCTTTTGATAGAAATGACTCTGGTACTTTCCGCAACTTACTTTCTATGGAGCACTTTCCTGAAACAAGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000422736.2 ENST00000656511.1 ENST00000668601.1 |
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