Pregenerated sensors for CT66 (Homo sapiens)
Ensembl gene IDs: ENSG00000234215Ensembl transcript IDs: ENST00000436600.2, ENST00000669908.1
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GTTGAGAAGGCCGTGGATAGACCCAGAGAGGCTGGTCGCTTTTGTTaGTCGATTCTCGGCTGCAGTCAGCTCTTTAATACAACTTTTTAT | + |
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Preference number: 5 (lower is better) Translates to: VEKAVDRPREAGRFC*SILGCSQLFNTTFY Trigger: ATAAAAAGTTGTATTAAAGAGCTGACTGCAGCCGAGAATCGATCAACAAAAGCGACCAGCCTCTCTGGGTCTATCCACGGCCTTCTCAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000436600.2 ENST00000669908.1 |
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| CDS CCA 90 bp | GAAGAACTTGCTTTATTTTGTAGGATGAGCTTGATAACCTCAGCGTaGATTTCAGCAGCTGCCGGAAACAGCACTCTAGAAGTTAACACA | + |
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Preference number: 5 (lower is better) Translates to: EELALFCRMSLITSA*ISAAAGNSTLEVNT Trigger: TGTGTTAACTTCTAGAGTGCTGTTTCCGGCAGCTGCTGAAATCCACGCTGAGGTTATCAAGCTCATCCTACAAAATAAAGCAAGTTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000436600.2 ENST00000669908.1 |
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| CDS TCA 90 bp | GACCCAAAAGGCATTGCTAATTCCAGGGAAGATTATATTGAATGCTaGACATTATCCCAAAATGCGTTTGCAAATTACCCTCACCAGAGG | + |
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Preference number: 5 (lower is better) Translates to: DPKGIANSREDYIEC*TLSQNAFANYPHQR Trigger: CCTCTGGTGAGGGTAATTTGCAAACGCATTTTGGGATAATGTTCAGCATTCAATATAATCTTCCCTGGAATTAGCAATGCCTTTTGGGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669908.1 |
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| CDS TCA 72 bp | GCCGTGGATAGACCCAGAGAGGCTGGTCGCTTTTGTTaGTCGATTCTCGGCTGCAGTCAGCTCTTTAATACA | + |
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Preference number: 6 (lower is better) Translates to: AVDRPREAGRFC*SILGCSQLFNT Trigger: TGTATTAAAGAGCTGACTGCAGCCGAGAATCGATCAACAAAAGCGACCAGCCTCTCTGGGTCTATCCACGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000436600.2 ENST00000669908.1 |
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| CDS CCA 72 bp | TCAAGAAACAACACTACCAGCTCCCCAGAAGCCGATTaGTGTTCTCTCCTAGTCATCAGCTCTCTCTCAAGG | + |
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Preference number: 6 (lower is better) Translates to: SRNNTTSSPEAD*CSLLVISSLSR Trigger: CCTTGAGAGAGAGCTGATGACTAGGAGAGAACACCAATCGGCTTCTGGGGAGCTGGTAGTGTTGTTTCTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669908.1 |
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| CDS CAA 72 bp | CTCAAGAAACAACACTACCAGCTCCCCAGAAGCCGATaGGTGTTCTCTCCTAGTCATCAGCTCTCTCTCAAG | + |
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Preference number: 6 (lower is better) Translates to: LKKQHYQLPRSR*VFSPSHQLSLK Trigger: CTTGAGAGAGAGCTGATGACTAGGAGAGAACACCAATCGGCTTCTGGGGAGCTGGTAGTGTTGTTTCTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669908.1 |
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| CDS CCA 72 bp | GCTTTATTTTGTAGGATGAGCTTGATAACCTCAGCGTaGATTTCAGCAGCTGCCGGAAACAGCACTCTAGAA | + |
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Preference number: 6 (lower is better) Translates to: ALFCRMSLITSA*ISAAAGNSTLE Trigger: TTCTAGAGTGCTGTTTCCGGCAGCTGCTGAAATCCACGCTGAGGTTATCAAGCTCATCCTACAAAATAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000436600.2 ENST00000669908.1 |
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| CDS CAA 72 bp | AATTGCGAAGAACTTGCTTTATTTTGTAGGATGAGCTaGATAACCTCAGCGTGGATTTCAGCAGCTGCCGGA | + |
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Preference number: 6 (lower is better) Translates to: NCEELALFCRMS*ITSAWISAAAG Trigger: TCCGGCAGCTGCTGAAATCCACGCTGAGGTTATCAAGCTCATCCTACAAAATAAAGCAAGTTCTTCGCAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000436600.2 ENST00000669908.1 |
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| CDS CCA 72 bp | GTTGCTCTGAGTGATTTAATAGTCTTTTGGCACACATaGGACATTGGTATATTCCTAAGCGTGGAACTGCTG | + |
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Preference number: 6 (lower is better) Translates to: VALSDLIVFWHT*DIGIFLSVELL Trigger: CAGCAGTTCCACGCTTAGGAATATACCAATGTCCCATGTGTGCCAAAAGACTATTAAATCACTCAGAGCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669908.1 |
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| CDS CAA 90 bp | TTTGCTTTAAATTGCGAAGAACTTGCTTTATTTTGTAGGATGAGCTaGATAACCTCAGCGTGGATTTCAGCAGCTGCCGGAAACAGCACT | + |
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Preference number: 6 (lower is better) Translates to: FALNCEELALFCRMS*ITSAWISAAAGNST Trigger: AGTGCTGTTTCCGGCAGCTGCTGAAATCCACGCTGAGGTTATCAAGCTCATCCTACAAAATAAAGCAAGTTCTTCGCAATTTAAAGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000436600.2 ENST00000669908.1 |
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| CDS CAA 90 bp | CCAGGGAAGATTATATTGAATGCTGAACATTATCCCAAAATGCGTTaGCAAATTACCCTCACCAGAGGCAAGGTTCTTGGATGCAGTGTA | + |
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Preference number: 6 (lower is better) Translates to: PGKIILNAEHYPKMR*QITLTRGKVLGCSV Trigger: TACACTGCATCCAAGAACCTTGCCTCTGGTGAGGGTAATTTGCAAACGCATTTTGGGATAATGTTCAGCATTCAATATAATCTTCCCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669908.1 |
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| CDS CAA 72 bp | ATCAGCTCTCTCTCAAGGGTAACCACTATCCTGACTTaGAATAGCATCAATGACTTTTGTCTGTTTCTGTAC | + |
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Preference number: 6 (lower is better) Translates to: ISSLSRVTTILT*NSINDFCLFLY Trigger: GTACAGAAACAGACAAAAGTCATTGATGCTATTCAAAGTCAGGATAGTGGTTACCCTTGAGAGAGAGCTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669908.1 |
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| CDS CAA 72 bp | ATTATATTGAATGCTGAACATTATCCCAAAATGCGTTaGCAAATTACCCTCACCAGAGGCAAGGTTCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: IILNAEHYPKMR*QITLTRGKVLG Trigger: TCCAAGAACCTTGCCTCTGGTGAGGGTAATTTGCAAACGCATTTTGGGATAATGTTCAGCATTCAATATAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669908.1 |
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| CDS TCA 72 bp | GGCATTGCTAATTCCAGGGAAGATTATATTGAATGCTaGACATTATCCCAAAATGCGTTTGCAAATTACCCT | + |
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Preference number: 6 (lower is better) Translates to: GIANSREDYIEC*TLSQNAFANYP Trigger: AGGGTAATTTGCAAACGCATTTTGGGATAATGTTCAGCATTCAATATAATCTTCCCTGGAATTAGCAATGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669908.1 |
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| CDS CAA 72 bp | ACCCAAAAGGCATTGCTAATTCCAGGGAAGATTATATaGAATGCTGAACATTATCCCAAAATGCGTTTGCAA | + |
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Preference number: 6 (lower is better) Translates to: TQKALLIPGKII*NAEHYPKMRLQ Trigger: TTGCAAACGCATTTTGGGATAATGTTCAGCATTCAATATAATCTTCCCTGGAATTAGCAATGCCTTTTGGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669908.1 |
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