RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CT62 (Homo sapiens)

Ensembl gene IDs: ENSG00000225362

Ensembl transcript IDs: ENST00000564862.2, ENST00000566432.1, ENST00000567117.1, ENST00000648023.1

Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp CCCTTCCCGCGGTCGCCGCCAGGGGGCGGCAGGAGCGGCTCCAGATaGCAGCGGGAGGCCGCAAGAGGGGAGGGAGGAAGGACCGAGGGA +
Preference number: 5 (lower is better)
Translates to: PFPRSPPGGGRSGSR*QREAARGEGGRTEG
Trigger: TCCCTCGGTCCTTCCTCCCTCCCCTCTTGCGGCCTCCCGCTGTCATCTGGAGCCGCTCCTGCCGCCCCCTGGCGGCGACCGCGGGAAGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000566432.1
ENST00000567117.1
ENST00000648023.1
CDS CCA 90 bp CTGGCCAGCTGGGCCACTCTCCACTCTCGCCCCCTCCCGCCCTCGTaGCCTCTGTCTAGACCGTACTCCCTCCTACTGGGTGATGTCTCT +
Preference number: 5 (lower is better)
Translates to: LASWATLHSRPLPPS*PLSRPYSLLLGDVS
Trigger: AGAGACATCACCCAGTAGGAGGGAGTACGGTCTAGACAGAGGCCACGAGGGCGGGAGGGGGCGAGAGTGGAGAGTGGCCCAGCTGGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000566432.1
ENST00000567117.1
ENST00000648023.1
CDS CCA 90 bp CCCTCCCGCCCTCGTGGCCTCTGTCTAGACCGTACTCCCTCCTACTaGGTGATGTCTCTTCCCCTGGGACCCAGGGACCATCCCGTTGTT +
Preference number: 5 (lower is better)
Translates to: PSRPRGLCLDRTPSY*VMSLPLGPRDHPVV
Trigger: AACAACGGGATGGTCCCTGGGTCCCAGGGGAAGAGACATCACCCAGTAGGAGGGAGTACGGTCTAGACAGAGGCCACGAGGGCGGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000566432.1
ENST00000567117.1
ENST00000648023.1
CDS GCA 90 bp CTCGCACAGGTTTACAGCACCACTTGCCTCGCCCACTCCCCGCTTTaGCTCCGCCCCATCCTGATGCTGCCGGAATGGCTGTTCCAAATG +
Preference number: 5 (lower is better)
Translates to: LAQVYSTTCLAHSPL*LRPILMLPEWLFQM
Trigger: CATTTGGAACAGCCATTCCGGCAGCATCAGGATGGGGCGGAGGCAAAGCGGGGAGTGGGCGAGGCAAGTGGTGCTGTAAACCTGTGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566432.1
ENST00000567117.1
CDS GCA 90 bp GCCGGAATGGCTGTTCCAAATGGAAGGATGCCCGCGTCCGTCCCCTaGCCCAGTCCTTCAACAGGTCCCCACAGACCTCAGGATAAGATG +
Preference number: 5 (lower is better)
Translates to: AGMAVPNGRMPASVP*PSPSTGPHRPQDKM
Trigger: CATCTTATCCTGAGGTCTGTGGGGACCTGTTGAAGGACTGGGGCAGGGGACGGACGCGGGCATCCTTCCATTTGGAACAGCCATTCCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566432.1
ENST00000567117.1
CDS TCA 90 bp CCTGCCCCAGTCCTTCAACAGGTCCCCACAGACCTCAGGATAAGATaGACGCGGAATTCAGGGCCTGGTCTCAACCGCCCTCTCCCTTTT +
Preference number: 5 (lower is better)
Translates to: PAPVLQQVPTDLRIR*TRNSGPGLNRPLPF
Trigger: AAAAGGGAGAGGGCGGTTGAGACCAGGCCCTGAATTCCGCGTTCATCTTATCCTGAGGTCTGTGGGGACCTGTTGAAGGACTGGGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566432.1
ENST00000567117.1
CDS TCA 90 bp GCCTGCTCTAGCCAGTGTCCTGTATCTGCTCTCTTTTGTGGACTCTaGAGCCACACAGCCCTTCTGCTCCTGGAGAGTCCCCTGCCTTCC +
Preference number: 5 (lower is better)
Translates to: ACSSQCPVSALFCGL*SHTALLLLESPLPS
Trigger: GGAAGGCAGGGGACTCTCCAGGAGCAGAAGGGCTGTGTGGCTTCAGAGTCCACAAAAGAGAGCAGATACAGGACACTGGCTAGAGCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000564862.2
ENST00000566432.1
ENST00000648023.1
CDS GCA 90 bp GCAGTGAGCCATTCATTCCTCAGAGATTTGGGAGCCCTCACCACGTaGAGACGCTGTGCTGCAGGCTGGGAACCACAGGAGAAATGGCTG +
Preference number: 5 (lower is better)
Translates to: AVSHSFLRDLGALTT*RRCAAGWEPQEKWL
Trigger: CAGCCATTTCTCCTGTGGTTCCCAGCCTGCAGCACAGCGTCTGCACGTGGTGAGGGCTCCCAAATCTCTGAGGAATGAATGGCTCACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566432.1
CDS TCA 90 bp CCTAGCACCAAGGCCACACTCGGCACTGAATACCTCAGGATAAGATaGACGCGGAATTCAGGGCCTGGTCTCAACCGCCCTCTCCCTTTT +
Preference number: 5 (lower is better)
Translates to: PSTKATLGTEYLRIR*TRNSGPGLNRPLPF
Trigger: AAAAGGGAGAGGGCGGTTGAGACCAGGCCCTGAATTCCGCGTTCATCTTATCCTGAGGTATTCAGTGCCGAGTGTGGCCTTGGTGCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648023.1
CDS GCA 90 bp ATTCCTCAGAGATTTGGGAGCCCTCACCACGTGCAGACGCTGTGCTaGAGGCTGGGAACCACAGGAGAAATGGCTGAATGTTCTGTGGGT +
Preference number: 5 (lower is better)
Translates to: IPQRFGSPHHVQTLC*RLGTTGEMAECSVG
Trigger: ACCCACAGAACATTCAGCCATTTCTCCTGTGGTTCCCAGCCTGCAGCACAGCGTCTGCACGTGGTGAGGGCTCCCAAATCTCTGAGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566432.1
CDS CCA 90 bp TTGAATCCTAGCACCAAGGCCACACTCGGCACTGAATACCTTGCGTaGGAGTGTGTGTGTGACCAGGGCTCCTTCCTGCCCTTAGAGTCA +
Preference number: 5 (lower is better)
Translates to: LNPSTKATLGTEYLA*ECVCDQGSFLPLES
Trigger: TGACTCTAAGGGCAGGAAGGAGCCCTGGTCACACACACACTCCCACGCAAGGTATTCAGTGCCGAGTGTGGCCTTGGTGCTAGGATTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566432.1
ENST00000567117.1
CDS CCA 90 bp CTGCTCTCTTTTGTGGACTCTGAAGCCACACAGCCCTTCTGCTCCTaGAGAGTCCCCTGCCTTCCTCAGGGTCTTTGCAAAGGTGTTTCC +
Preference number: 5 (lower is better)
Translates to: LLSFVDSEATQPFCS*RVPCLPQGLCKGVS
Trigger: GGAAACACCTTTGCAAAGACCCTGAGGAAGGCAGGGGACTCTCCAGGAGCAGAAGGGCTGTGTGGCTTCAGAGTCCACAAAAGAGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000564862.2
ENST00000566432.1
ENST00000648023.1
CDS TCA 90 bp TCCAGTTCCACATGCCCTGAACTCCCAGAAGGTTGCTCTCAGCAGTaGGCCATTCATTCCTCAGAGATTTGGGAGCCCTCACCACGTGCA +
Preference number: 5 (lower is better)
Translates to: SSSTCPELPEGCSQQ*AIHSSEIWEPSPRA
Trigger: TGCACGTGGTGAGGGCTCCCAAATCTCTGAGGAATGAATGGCTCACTGCTGAGAGCAACCTTCTGGGAGTTCAGGGCATGTGGAACTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566432.1
CDS GCA 90 bp GTGGACTCTGAAGCCACACAGCCCTTCTGCTCCTGGAGAGTCCCCTaGCTTCCTCAGGGTCTTTGCAAAGGTGTTTCCTTCTGTCTAGAA +
Preference number: 5 (lower is better)
Translates to: VDSEATQPFCSWRVP*LPQGLCKGVSFCLE
Trigger: TTCTAGACAGAAGGAAACACCTTTGCAAAGACCCTGAGGAAGGCAGGGGACTCTCCAGGAGCAGAAGGGCTGTGTGGCTTCAGAGTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564862.2
ENST00000566432.1
ENST00000648023.1
CDS GCA 90 bp CTGTATCTGCTCTCTTTTGTGGACTCTGAAGCCACACAGCCCTTCTaGTCCTGGAGAGTCCCCTGCCTTCCTCAGGGTCTTTGCAAAGGT +
Preference number: 5 (lower is better)
Translates to: LYLLSFVDSEATQPF*SWRVPCLPQGLCKG
Trigger: ACCTTTGCAAAGACCCTGAGGAAGGCAGGGGACTCTCCAGGAGCAGAAGGGCTGTGTGGCTTCAGAGTCCACAAAAGAGAGCAGATACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000564862.2
ENST00000566432.1
ENST00000648023.1
CDS CCA 90 bp CATGTCCTCAGAGCTGTGGCTGCAGAATTTTCTCTTGCCCAGTTGTaGGTTACAGGTCAAGTAGAGAGTCAGCCCCAGGCAAGGGCACAG +
Preference number: 5 (lower is better)
Translates to: HVLRAVAAEFSLAQL*VTGQVESQPQARAQ
Trigger: CTGTGCCCTTGCCTGGGGCTGACTCTCTACTTGACCTGTAACCCACAACTGGGCAAGAGAAAATTCTGCAGCCACAGCTCTGAGGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000564862.2
ENST00000566432.1
ENST00000567117.1
ENST00000648023.1
CDS GCA 90 bp GGGTCCAGCTGTCCTGCATTGCCTTCCTGTAATCTGTTCACACGTTaGTCTTATTCCAGTTCCACATGCCCTGAACTCCCAGAAGGTTGC +
Preference number: 5 (lower is better)
Translates to: GSSCPALPSCNLFTR*SYSSSTCPELPEGC
Trigger: GCAACCTTCTGGGAGTTCAGGGCATGTGGAACTGGAATAAGAGCAACGTGTGAACAGATTACAGGAAGGCAATGCAGGACAGCTGGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566432.1
CDS TCA 90 bp GATCCGGGTGATGCCTCTTGGCTGAAGTGTGGCCTGAAGACTCCCTaGCACTTCATGGGAATCCTTGACATTCCGTCTGGAAACCATTTT +
Preference number: 5 (lower is better)
Translates to: DPGDASWLKCGLKTP*HFMGILDIPSGNHF
Trigger: AAAATGGTTTCCAGACGGAATGTCAAGGATTCCCATGAAGTGTCAGGGAGTCTTCAGGCCACACTTCAGCCAAGAGGCATCACCCGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564862.2
CDS TCA 90 bp CCTGAAGTGTGGCCTGAAGACTCCCTGACACTTCATGGGAATCCTTaGCATTCCGTCTGGAAACCATTTTGCTCATGTCCTCAGAGCTGT +
Preference number: 5 (lower is better)
Translates to: PEVWPEDSLTLHGNP*HSVWKPFCSCPQSC
Trigger: ACAGCTCTGAGGACATGAGCAAAATGGTTTCCAGACGGAATGTCAAGGATTCCCATGAAGTGTCAGGGAGTCTTCAGGCCACACTTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566432.1
ENST00000648023.1
CDS TCA 90 bp GCTGAAGTGTGGCCTGAAGACTCCCTGACACTTCATGGGAATCCTTaGCATTCCGTCTGGAAACCATTTTGCTCATGTCCTCAGAGCTGT +
Preference number: 5 (lower is better)
Translates to: AEVWPEDSLTLHGNP*HSVWKPFCSCPQSC
Trigger: ACAGCTCTGAGGACATGAGCAAAATGGTTTCCAGACGGAATGTCAAGGATTCCCATGAAGTGTCAGGGAGTCTTCAGGCCACACTTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564862.2
CDS TCA 90 bp TCCTTCTGTCTGCATGTCCTAAGGAGAAGCAGCCTCGGATCCGGGTaGTGCCTCTTGGCTGTGAGTATTATCATTTGCAAAGAGGAAAAG +
Preference number: 5 (lower is better)
Translates to: SFCLHVLRRSSLGSG*CLLAVSIIICKEEK
Trigger: CTTTTCCTCTTTGCAAATGATAATACTCACAGCCAAGAGGCATCACCCGGATCCGAGGCTGCTTCTCCTTAGGACATGCAGACAGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566432.1
ENST00000648023.1
CDS GCA 90 bp CATTCCGTCTGGAAACCATTTTGCTCATGTCCTCAGAGCTGTGGCTaGAGAATTTTCTCTTGCCCAGTTGTGGGTTACAGGTCAAGTAGA +
Preference number: 5 (lower is better)
Translates to: HSVWKPFCSCPQSCG*RIFSCPVVGYRSSR
Trigger: TCTACTTGACCTGTAACCCACAACTGGGCAAGAGAAAATTCTGCAGCCACAGCTCTGAGGACATGAGCAAAATGGTTTCCAGACGGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000564862.2
ENST00000566432.1
ENST00000567117.1
ENST00000648023.1
CDS CCA 90 bp CCAAGAGATGTTTCGCTGGTAAAAGGATTCCACGTCAAATACATTTaGGACACTCTGCATCATCTCTCCCCTCTCAGGCAATCTCAGTGC +
Preference number: 5 (lower is better)
Translates to: PRDVSLVKGFHVKYI*DTLHHLSPLRQSQC
Trigger: GCACTGAGATTGCCTGAGAGGGGAGAGATGATGCAGAGTGTCCCAAATGTATTTGACGTGGAATCCTTTTACCAGCGAAACATCTCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566432.1
CDS CCA 90 bp TTGACATTCCGTCTGGAAACCATTTTGCTCATGTCCTCAGAGCTGTaGCTGCAGAATTTTCTCTTGCCCAGTTGTGGGTTACAGGTCAAG +
Preference number: 5 (lower is better)
Translates to: LTFRLETILLMSSEL*LQNFLLPSCGLQVK
Trigger: CTTGACCTGTAACCCACAACTGGGCAAGAGAAAATTCTGCAGCCACAGCTCTGAGGACATGAGCAAAATGGTTTCCAGACGGAATGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000564862.2
ENST00000566432.1
ENST00000567117.1
ENST00000648023.1
CDS CCA 90 bp CTTGTACCAGGTAACAAGAACCTTCCTATCTCCTCTGACCAGATGTaGGGTGAGAAAGAGGATGAGAGCAAGTGTGAAGCAGAAAAGGGA +
Preference number: 5 (lower is better)
Translates to: LVPGNKNLPISSDQM*GEKEDESKCEAEKG
Trigger: TCCCTTTTCTGCTTCACACTTGCTCTCATCCTCTTTCTCACCCCACATCTGGTCAGAGGAGATAGGAAGGTTCTTGTTACCTGGTACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566432.1
ENST00000648023.1
CDS TCA 90 bp TGCAGAGCATCTCAGATTCCCTGTCCTGAGGCAGGTACTCCTGTATaGGCTCTTAAATACTTCTGCATTTACCTACCACCTACTGGTATG +
Preference number: 5 (lower is better)
Translates to: CRASQIPCPEAGTPV*ALKYFCIYLPPTGM
Trigger: CATACCAGTAGGTGGTAGGTAAATGCAGAAGTATTTAAGAGCTCATACAGGAGTACCTGCCTCAGGACAGGGAATCTGAGATGCTCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566432.1
CDS GCA 90 bp GTATGCATCATTTATCAACTTAATCCGTTCTTTAAGATCCAGCTCTaGAGAGCATCTCAGATTCCCTGTCCTGAGGCAGGTACTCCTGTA +
Preference number: 5 (lower is better)
Translates to: VCIIYQLNPFFKIQL*RASQIPCPEAGTPV
Trigger: TACAGGAGTACCTGCCTCAGGACAGGGAATCTGAGATGCTCTGCAGAGCTGGATCTTAAAGAACGGATTAAGTTGATAAATGATGCATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566432.1
CDS TCA 90 bp ATGCCTCCCTTATTTTCTTATTATTTGCTGGGCACAGGCTTGCCTTaGCTTTACAGTCTGCATAAGTTTACAACCAGGAAAATGAAAGGA +
Preference number: 5 (lower is better)
Translates to: MPPLFSYYLLGTGLP*LYSLHKFTTRKMKG
Trigger: TCCTTTCATTTTCCTGGTTGTAAACTTATGCAGACTGTAAAGTCAAGGCAAGCCTGTGCCCAGCAAATAATAAGAAAATAAGGGAGGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566432.1
CDS TCA 90 bp CTTAAATACTTCTGCATTTACCTACCACCTACTGGTATGGTTTTCTaGCTATATTTCATCTTCTTCGCCTCACGTGGAGTTTCTTTTAGA +
Preference number: 5 (lower is better)
Translates to: LKYFCIYLPPTGMVF*LYFIFFASRGVSFR
Trigger: TCTAAAAGAAACTCCACGTGAGGCGAAGAAGATGAAATATAGTCAGAAAACCATACCAGTAGGTGGTAGGTAAATGCAGAAGTATTTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566432.1
CDS GCA 72 bp GTTTACAGCACCACTTGCCTCGCCCACTCCCCGCTTTaGCTCCGCCCCATCCTGATGCTGCCGGAATGGCTG +
Preference number: 6 (lower is better)
Translates to: VYSTTCLAHSPL*LRPILMLPEWL
Trigger: CAGCCATTCCGGCAGCATCAGGATGGGGCGGAGGCAAAGCGGGGAGTGGGCGAGGCAAGTGGTGCTGTAAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566432.1
ENST00000567117.1
CDS CCA 72 bp CCGCTTTGCCTCCGCCCCATCCTGATGCTGCCGGAATaGCTGTTCCAAATGGAAGGATGCCCGCGTCCGTCC +
Preference number: 6 (lower is better)
Translates to: PLCLRPILMLPE*LFQMEGCPRPS
Trigger: GGACGGACGCGGGCATCCTTCCATTTGGAACAGCCATTCCGGCAGCATCAGGATGGGGCGGAGGCAAAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566432.1
ENST00000567117.1
CDS GCA 72 bp GCTGTTCCAAATGGAAGGATGCCCGCGTCCGTCCCCTaGCCCAGTCCTTCAACAGGTCCCCACAGACCTCAG +
Preference number: 6 (lower is better)
Translates to: AVPNGRMPASVP*PSPSTGPHRPQ
Trigger: CTGAGGTCTGTGGGGACCTGTTGAAGGACTGGGGCAGGGGACGGACGCGGGCATCCTTCCATTTGGAACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566432.1
ENST00000567117.1
CDS CCA 72 bp GCCACTACGTCAAGCTGTCCCCTACTTCTTCCACCCTaGGAACACTGGGCCTCCCCAAGGCCTCCAGGACAG +
Preference number: 6 (lower is better)
Translates to: ATTSSCPLLLPP*EHWASPRPPGQ
Trigger: CTGTCCTGGAGGCCTTGGGGAGGCCCAGTGTTCCCAGGGTGGAAGAAGTAGGGGACAGCTTGACGTAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566432.1
ENST00000648023.1
CDS GCA 72 bp CCCAAGGCCTCCAGGACAGCAGCGGGCTCCAGGGCCTaGTCTAGCCAGTGTCCTGTATCTGCTCTCTTTTGT +
Preference number: 6 (lower is better)
Translates to: PKASRTAAGSRA*SSQCPVSALFC
Trigger: ACAAAAGAGAGCAGATACAGGACACTGGCTAGAGCAGGCCCTGGAGCCCGCTGCTGTCCTGGAGGCCTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564862.2
ENST00000566432.1
ENST00000648023.1
CDS CCA 72 bp CCTCGTGGCCTCTGTCTAGACCGTACTCCCTCCTACTaGGTGATGTCTCTTCCCCTGGGACCCAGGGACCAT +
Preference number: 6 (lower is better)
Translates to: PRGLCLDRTPSY*VMSLPLGPRDH
Trigger: ATGGTCCCTGGGTCCCAGGGGAAGAGACATCACCCAGTAGGAGGGAGTACGGTCTAGACAGAGGCCACGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000566432.1
ENST00000567117.1
ENST00000648023.1
CDS CCA 72 bp AGCACCAAGGCCACACTCGGCACTGAATACCTTGCGTaGGAGTGTGTGTGTGACCAGGGCTCCTTCCTGCCC +
Preference number: 6 (lower is better)
Translates to: STKATLGTEYLA*ECVCDQGSFLP
Trigger: GGGCAGGAAGGAGCCCTGGTCACACACACACTCCCACGCAAGGTATTCAGTGCCGAGTGTGGCCTTGGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566432.1
ENST00000567117.1
CDS TCA 72 bp CTGCATGTCCTAAGGAGAAGCAGCCTCGGATCCGGGTaGTGCCTCTTGGCTGAAGTGTGGCCTGAAGACTCC +
Preference number: 6 (lower is better)
Translates to: LHVLRRSSLGSG*CLLAEVWPEDS
Trigger: GGAGTCTTCAGGCCACACTTCAGCCAAGAGGCATCACCCGGATCCGAGGCTGCTTCTCCTTAGGACATGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564862.2
CDS GCA 72 bp CATTCATTCCTCAGAGATTTGGGAGCCCTCACCACGTaGAGACGCTGTGCTGCAGGCTGGGAACCACAGGAG +
Preference number: 6 (lower is better)
Translates to: HSFLRDLGALTT*RRCAAGWEPQE
Trigger: CTCCTGTGGTTCCCAGCCTGCAGCACAGCGTCTGCACGTGGTGAGGGCTCCCAAATCTCTGAGGAATGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566432.1
CDS TCA 72 bp GTCCTTCAACAGGTCCCCACAGACCTCAGGATAAGATaGACGCGGAATTCAGGGCCTGGTCTCAACCGCCCT +
Preference number: 6 (lower is better)
Translates to: VLQQVPTDLRIR*TRNSGPGLNRP
Trigger: AGGGCGGTTGAGACCAGGCCCTGAATTCCGCGTTCATCTTATCCTGAGGTCTGTGGGGACCTGTTGAAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566432.1
ENST00000567117.1
CDS GCA 72 bp AGATTTGGGAGCCCTCACCACGTGCAGACGCTGTGCTaGAGGCTGGGAACCACAGGAGAAATGGCTGAATGT +
Preference number: 6 (lower is better)
Translates to: RFGSPHHVQTLC*RLGTTGEMAEC
Trigger: ACATTCAGCCATTTCTCCTGTGGTTCCCAGCCTGCAGCACAGCGTCTGCACGTGGTGAGGGCTCCCAAATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566432.1
CDS GCA 72 bp CTCTCTTTTGTGGACTCTGAAGCCACACAGCCCTTCTaGTCCTGGAGAGTCCCCTGCCTTCCTCAGGGTCTT +
Preference number: 6 (lower is better)
Translates to: LSFVDSEATQPF*SWRVPCLPQGL
Trigger: AAGACCCTGAGGAAGGCAGGGGACTCTCCAGGAGCAGAAGGGCTGTGTGGCTTCAGAGTCCACAAAAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000564862.2
ENST00000566432.1
ENST00000648023.1
CDS TCA 72 bp TTCTGTGGGTGTGGCTGTAGGCAGAGGGCTGATCAGTaGGGTGGGGTGGTGACAGTCTTCTATAGGATGTCG +
Preference number: 6 (lower is better)
Translates to: FCGCGCRQRADQ*GGVVTVFYRMS
Trigger: CGACATCCTATAGAAGACTGTCACCACCCCACCTCACTGATCAGCCCTCTGCCTACAGCCACACCCACAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000566432.1
ENST00000567117.1
ENST00000648023.1
CDS TCA 72 bp AAGGCCACACTCGGCACTGAATACCTCAGGATAAGATaGACGCGGAATTCAGGGCCTGGTCTCAACCGCCCT +
Preference number: 6 (lower is better)
Translates to: KATLGTEYLRIR*TRNSGPGLNRP
Trigger: AGGGCGGTTGAGACCAGGCCCTGAATTCCGCGTTCATCTTATCCTGAGGTATTCAGTGCCGAGTGTGGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648023.1
CDS CAA 72 bp TTGCTCTCAGCAGTGAGCCATTCATTCCTCAGAGATTaGGGAGCCCTCACCACGTGCAGACGCTGTGCTGCA +
Preference number: 6 (lower is better)
Translates to: LLSAVSHSFLRD*GALTTCRRCAA
Trigger: TGCAGCACAGCGTCTGCACGTGGTGAGGGCTCCCAAATCTCTGAGGAATGAATGGCTCACTGCTGAGAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566432.1
CDS CAA 90 bp GCTCATGTCCTCAGAGCTGTGGCTGCAGAATTTTCTCTTGCCCAGTaGTGGGTTACAGGTCAAGTAGAGAGTCAGCCCCAGGCAAGGGCA +
Preference number: 6 (lower is better)
Translates to: AHVLRAVAAEFSLAQ*WVTGQVESQPQARA
Trigger: TGCCCTTGCCTGGGGCTGACTCTCTACTTGACCTGTAACCCACAACTGGGCAAGAGAAAATTCTGCAGCCACAGCTCTGAGGACATGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000564862.2
ENST00000566432.1
ENST00000567117.1
ENST00000648023.1
CDS GCA 72 bp TGCTCCTGGAGAGTCCCCTGCCTTCCTCAGGGTCTTTaGAAAGGTGTTTCCTTCTGTCTAGAACAGTCTCCC +
Preference number: 6 (lower is better)
Translates to: CSWRVPCLPQGL*KGVSFCLEQSP
Trigger: GGGAGACTGTTCTAGACAGAAGGAAACACCTTTGCAAAGACCCTGAGGAAGGCAGGGGACTCTCCAGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564862.2
ENST00000566432.1
ENST00000648023.1
CDS CAA 72 bp CTGCTCCTGGAGAGTCCCCTGCCTTCCTCAGGGTCTTaGCAAAGGTGTTTCCTTCTGTCTAGAACAGTCTCC +
Preference number: 6 (lower is better)
Translates to: LLLESPLPSSGS*QRCFLLSRTVS
Trigger: GGAGACTGTTCTAGACAGAAGGAAACACCTTTGCAAAGACCCTGAGGAAGGCAGGGGACTCTCCAGGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564862.2
ENST00000566432.1
ENST00000648023.1
CDS TCA 72 bp ACATGCCCTGAACTCCCAGAAGGTTGCTCTCAGCAGTaGGCCATTCATTCCTCAGAGATTTGGGAGCCCTCA +
Preference number: 6 (lower is better)
Translates to: TCPELPEGCSQQ*AIHSSEIWEPS
Trigger: TGAGGGCTCCCAAATCTCTGAGGAATGAATGGCTCACTGCTGAGAGCAACCTTCTGGGAGTTCAGGGCATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566432.1
CDS TCA 72 bp GATGCCTCTTGGCTGAAGTGTGGCCTGAAGACTCCCTaGCACTTCATGGGAATCCTTGACATTCCGTCTGGA +
Preference number: 6 (lower is better)
Translates to: DASWLKCGLKTP*HFMGILDIPSG
Trigger: TCCAGACGGAATGTCAAGGATTCCCATGAAGTGTCAGGGAGTCTTCAGGCCACACTTCAGCCAAGAGGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564862.2
CDS CCA 72 bp AGACCTCAGGATAAGATGAACGCGGAATTCAGGGCCTaGTCTCAACCGCCCTCTCCCTTTTCCTCTCACTTA +
Preference number: 6 (lower is better)
Translates to: RPQDKMNAEFRA*SQPPSPFSSHL
Trigger: TAAGTGAGAGGAAAAGGGAGAGGGCGGTTGAGACCAGGCCCTGAATTCCGCGTTCATCTTATCCTGAGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566432.1
ENST00000567117.1
CDS CCA 72 bp AGAGCTGTGGCTGCAGAATTTTCTCTTGCCCAGTTGTaGGTTACAGGTCAAGTAGAGAGTCAGCCCCAGGCA +
Preference number: 6 (lower is better)
Translates to: RAVAAEFSLAQL*VTGQVESQPQA
Trigger: TGCCTGGGGCTGACTCTCTACTTGACCTGTAACCCACAACTGGGCAAGAGAAAATTCTGCAGCCACAGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000564862.2
ENST00000566432.1
ENST00000567117.1
ENST00000648023.1
CDS CAA 72 bp CTCAGAGCTGTGGCTGCAGAATTTTCTCTTGCCCAGTaGTGGGTTACAGGTCAAGTAGAGAGTCAGCCCCAG +
Preference number: 6 (lower is better)
Translates to: LRAVAAEFSLAQ*WVTGQVESQPQ
Trigger: CTGGGGCTGACTCTCTACTTGACCTGTAACCCACAACTGGGCAAGAGAAAATTCTGCAGCCACAGCTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000564862.2
ENST00000566432.1
ENST00000567117.1
ENST00000648023.1
CDS TCA 72 bp GTTCACACGTTGCTCTTATTCCAGTTCCACATGCCCTaGACTCCCAGAAGGTTGCTCTCAGCAGTGAGCCAT +
Preference number: 6 (lower is better)
Translates to: VHTLLLFQFHMP*TPRRLLSAVSH
Trigger: ATGGCTCACTGCTGAGAGCAACCTTCTGGGAGTTCAGGGCATGTGGAACTGGAATAAGAGCAACGTGTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566432.1
CDS CCA 72 bp ATACCTCAGGATAAGATGAACGCGGAATTCAGGGCCTaGTCTCAACCGCCCTCTCCCTTTTCCTCTCACTTA +
Preference number: 6 (lower is better)
Translates to: IPQDKMNAEFRA*SQPPSPFSSHL
Trigger: TAAGTGAGAGGAAAAGGGAGAGGGCGGTTGAGACCAGGCCCTGAATTCCGCGTTCATCTTATCCTGAGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648023.1
CDS TCA 72 bp CTGCATGTCCTAAGGAGAAGCAGCCTCGGATCCGGGTaGTGCCTCTTGGCTGTGAGTATTATCATTTGCAAA +
Preference number: 6 (lower is better)
Translates to: LHVLRRSSLGSG*CLLAVSIIICK
Trigger: TTTGCAAATGATAATACTCACAGCCAAGAGGCATCACCCGGATCCGAGGCTGCTTCTCCTTAGGACATGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566432.1
ENST00000648023.1
CDS CAA 90 bp CCTGACACTTCATGGGAATCCTTGACATTCCGTCTGGAAACCATTTaGCTCATGTCCTCAGAGCTGTGGCTGCAGAATTTTCTCTTGCCC +
Preference number: 6 (lower is better)
Translates to: PDTSWESLTFRLETI*LMSSELWLQNFLLP
Trigger: GGGCAAGAGAAAATTCTGCAGCCACAGCTCTGAGGACATGAGCAAAATGGTTTCCAGACGGAATGTCAAGGATTCCCATGAAGTGTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564862.2
ENST00000566432.1
ENST00000648023.1
CDS TCA 72 bp TGGCCTGAAGACTCCCTGACACTTCATGGGAATCCTTaGCATTCCGTCTGGAAACCATTTTGCTCATGTCCT +
Preference number: 6 (lower is better)
Translates to: WPEDSLTLHGNP*HSVWKPFCSCP
Trigger: AGGACATGAGCAAAATGGTTTCCAGACGGAATGTCAAGGATTCCCATGAAGTGTCAGGGAGTCTTCAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564862.2
ENST00000566432.1
ENST00000648023.1
CDS GCA 72 bp TGTCCTGCATTGCCTTCCTGTAATCTGTTCACACGTTaGTCTTATTCCAGTTCCACATGCCCTGAACTCCCA +
Preference number: 6 (lower is better)
Translates to: CPALPSCNLFTR*SYSSSTCPELP
Trigger: TGGGAGTTCAGGGCATGTGGAACTGGAATAAGAGCAACGTGTGAACAGATTACAGGAAGGCAATGCAGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566432.1
CDS GCA 72 bp TCATGTCCTCAGAGCTGTGGCTGCAGAATTTTCTCTTaGCCAGTTGTGGGTTACAGGTCAAGTAGAGAGTCA +
Preference number: 6 (lower is better)
Translates to: SCPQSCGCRIFS*PVVGYRSSRES
Trigger: TGACTCTCTACTTGACCTGTAACCCACAACTGGGCAAGAGAAAATTCTGCAGCCACAGCTCTGAGGACATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000564862.2
ENST00000566432.1
ENST00000567117.1
ENST00000648023.1
CDS GCA 72 bp TGGAAACCATTTTGCTCATGTCCTCAGAGCTGTGGCTaGAGAATTTTCTCTTGCCCAGTTGTGGGTTACAGG +
Preference number: 6 (lower is better)
Translates to: WKPFCSCPQSCG*RIFSCPVVGYR
Trigger: CCTGTAACCCACAACTGGGCAAGAGAAAATTCTGCAGCCACAGCTCTGAGGACATGAGCAAAATGGTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000564862.2
ENST00000566432.1
ENST00000567117.1
ENST00000648023.1
CDS CCA 72 bp CGTCTGGAAACCATTTTGCTCATGTCCTCAGAGCTGTaGCTGCAGAATTTTCTCTTGCCCAGTTGTGGGTTA +
Preference number: 6 (lower is better)
Translates to: RLETILLMSSEL*LQNFLLPSCGL
Trigger: TAACCCACAACTGGGCAAGAGAAAATTCTGCAGCCACAGCTCTGAGGACATGAGCAAAATGGTTTCCAGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000564862.2
ENST00000566432.1
ENST00000567117.1
ENST00000648023.1
CDS CAA 90 bp CCCAAGAGATGTTTCGCTGGTAAAAGGATTCCACGTCAAATACATTaGGGACACTCTGCATCATCTCTCCCCTCTCAGGCAATCTCAGTG +
Preference number: 6 (lower is better)
Translates to: PKRCFAGKRIPRQIH*GHSASSLPSQAISV
Trigger: CACTGAGATTGCCTGAGAGGGGAGAGATGATGCAGAGTGTCCCAAATGTATTTGACGTGGAATCCTTTTACCAGCGAAACATCTCTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566432.1
CDS CAA 72 bp TGTTTCGCTGGTAAAAGGATTCCACGTCAAATACATTaGGGACACTCTGCATCATCTCTCCCCTCTCAGGCA +
Preference number: 6 (lower is better)
Translates to: CFAGKRIPRQIH*GHSASSLPSQA
Trigger: TGCCTGAGAGGGGAGAGATGATGCAGAGTGTCCCAAATGTATTTGACGTGGAATCCTTTTACCAGCGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566432.1
CDS CAA 72 bp TGTCTAGAACAGTCTCCCACGCTGTCCCCTTTGACTTaGGGTGACTTTTCTCATCCTTCCTTTAGTCGTTCA +
Preference number: 6 (lower is better)
Translates to: CLEQSPTLSPLT*GDFSHPSFSRS
Trigger: TGAACGACTAAAGGAAGGATGAGAAAAGTCACCCAAAGTCAAAGGGGACAGCGTGGGAGACTGTTCTAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000564862.2
ENST00000566432.1
ENST00000648023.1
CDS TCA 72 bp TCTCAGATTCCCTGTCCTGAGGCAGGTACTCCTGTATaGGCTCTTAAATACTTCTGCATTTACCTACCACCT +
Preference number: 6 (lower is better)
Translates to: SQIPCPEAGTPV*ALKYFCIYLPP
Trigger: AGGTGGTAGGTAAATGCAGAAGTATTTAAGAGCTCATACAGGAGTACCTGCCTCAGGACAGGGAATCTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566432.1
CDS TCA 72 bp TTCTGCATTTACCTACCACCTACTGGTATGGTTTTCTaGCTATATTTCATCTTCTTCGCCTCACGTGGAGTT +
Preference number: 6 (lower is better)
Translates to: FCIYLPPTGMVF*LYFIFFASRGV
Trigger: AACTCCACGTGAGGCGAAGAAGATGAAATATAGTCAGAAAACCATACCAGTAGGTGGTAGGTAAATGCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566432.1
CDS TCA 72 bp AGAACTCATAAAAACGGCCATAAGCATCACTGGCATTaGATGGAATTGCACAGCACTCCTTTCTCAATTGTT +
Preference number: 6 (lower is better)
Translates to: RTHKNGHKHHWH*MELHSTPFSIV
Trigger: AACAATTGAGAAAGGAGTGCTGTGCAATTCCATTCAATGCCAGTGATGCTTATGGCCGTTTTTATGAGTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000566432.1
ENST00000648023.1
CDS TCA 72 bp TCAATTGTTAATAAAATGACATACTTCCATATCAGCTaGTCAACAGCCACTACGTCAAGCTGTCCCCTACTT +
Preference number: 6 (lower is better)
Translates to: SIVNKMTYFHIS*STATTSSCPLL
Trigger: AAGTAGGGGACAGCTTGACGTAGTGGCTGTTGATCAGCTGATATGGAAGTATGTCATTTTATTAACAATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566432.1
ENST00000648023.1
CDS CCA 72 bp CTCATAAAAACGGCCATAAGCATCACTGGCATTGAATaGAATTGCACAGCACTCCTTTCTCAATTGTTAATA +
Preference number: 6 (lower is better)
Translates to: LIKTAISITGIE*NCTALLSQLLI
Trigger: TATTAACAATTGAGAAAGGAGTGCTGTGCAATTCCATTCAATGCCAGTGATGCTTATGGCCGTTTTTATGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000566432.1
ENST00000648023.1
CDS TCA 72 bp TTATTTTCTTATTATTTGCTGGGCACAGGCTTGCCTTaGCTTTACAGTCTGCATAAGTTTACAACCAGGAAA +
Preference number: 6 (lower is better)
Translates to: LFSYYLLGTGLP*LYSLHKFTTRK
Trigger: TTTCCTGGTTGTAAACTTATGCAGACTGTAAAGTCAAGGCAAGCCTGTGCCCAGCAAATAATAAGAAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566432.1
CDS CCA 72 bp GATGTCGTATGCATCATTTATCAACTTAACACCTACTaGTATGGTTTTCTGACTATATTTCATCTTCTTCGC +
Preference number: 6 (lower is better)
Translates to: DVVCIIYQLNTY*YGFLTIFHLLR
Trigger: GCGAAGAAGATGAAATATAGTCAGAAAACCATACCAGTAGGTGTTAAGTTGATAAATGATGCATACGACATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567117.1
ENST00000648023.1