Pregenerated sensors for CT45A3 (Homo sapiens)
Ensembl gene IDs: ENSG00000269096Ensembl transcript IDs: ENST00000597510.6
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | AGATCACAGCAACCCCATCCAGGCAGGACATCTAATGTTTCAGACTCTTCCGTATACAACACTGTGAGCTaGTGCAGAAACCACGACTGT | + |
|
Preference number: 2 (lower is better) Translates to: RSQQPHPGRTSNVSDSSVYNTVS*CRNHDC Trigger: ACAGTCGTGGTTTCTGCAGCAGCTCACAGTGTTGTA...TACGGAAGAGTCTGAAACATTAGATGTCCTGCCTGGATGGGGTTGCTGTGATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597510.6 |
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| 3UTR-3UTR CCA 90 bp | AGATCACAGCAACCCCATCCAGGCAGGACATCTAATGTTTCAGACTCTTCCGTAAAAGGGAATGTGAAATaGGTAGCGAAAGAACGTAGT | + |
|
Preference number: 2 (lower is better) Translates to: RSQQPHPGRTSNVSDSSVKGNVK*VAKERS Trigger: ACTACGTTCTTTCGCTACCCATTTCACATTCCCTTT...TACGGAAGAGTCTGAAACATTAGATGTCCTGCCTGGATGGGGTTGCTGTGATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000597510.6 |
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| 3UTR TCA 72 bp | TTGAGTCATCCTGCCAGGCCAAGCATCATGACCAACTaGCATGCTATCTCAGGGCAAAGGGAATGTGAAATG | + |
|
Preference number: 3 (lower is better) Translates to: LSHPARPSIMTN*HAISGQRECEM Trigger: CATTTCACATTCCCTTTGCCCTGAGATAGCATGTCAGTTGGTCATGATGCTTGGCCTGGCAGGATGACTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597510.6 |
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| CDS-3UTR TCA 90 bp | AGATCACAGCAACCCCATCCAGGCAGGACATCTAATGTTTCAGACTCTTCCGTACCAGCTACAACACTGTaGGCTGCTGCAGAAACCACG | + |
|
Preference number: 4 (lower is better) Translates to: RSQQPHPGRTSNVSDSSVPATTL*AAAETT Trigger: CGTGGTTTCTGCAGCAGCTCACAGTGTTGTAGCTGG...TACGGAAGAGTCTGAAACATTAGATGTCCTGCCTGGATGGGGTTGCTGTGATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597510.6 |
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