Pregenerated sensors for CT45A1 (Homo sapiens)
Ensembl gene IDs: ENSG00000268940Ensembl transcript IDs: ENST00000594117.4
Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | AAGAACGTAGTGATAAATACCAGCTACAACACTGTGAGCTGCTGCAGAAACCACTACAACACTGTGAGCTaGTGCAGAAACCACGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: KNVVINTSYNTVSCCRNHYNTVS*CRNHDC Trigger: ACAGTCGTGGTTTCTGCAGCAGCTCACAGTGTTGTA...GTGGTTTCTGCAGCAGCTCACAGTGTTGTAGCTGGTATTTATCACTACGTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594117.4 |
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| CDS-3UTR CCA 90 bp | AGATCACAGCAACCCCATCCAGGCAGGACATCTAATGGTTCAGACTCTTCCGTAAAAGGGAATGTGAAATaGGTAGCGAAAGAACGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: RSQQPHPGRTSNGSDSSVKGNVK*VAKERS Trigger: ACTACGTTCTTTCGCTACCCATTTCACATTCCCTTT...TACGGAAGAGTCTGAACCATTAGATGTCCTGCCTGGATGGGGTTGCTGTGATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000594117.4 |
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| CDS-3UTR GCA 90 bp | AAGAACGTAGTGATAAATACCAGCTACAACACTGTGAGCTGCTGCAGAAACCACTGTCATAAGCTTCTTTaGTTTGGACATGGCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KNVVINTSYNTVSCCRNHCHKLL*FGHGRA Trigger: GGCTCTGCCATGTCCAAAGCAAAGAAGCTTATGACA...GTGGTTTCTGCAGCAGCTCACAGTGTTGTAGCTGGTATTTATCACTACGTTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000594117.4 |
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