Pregenerated sensors for CSTL1 (Homo sapiens)
Ensembl gene IDs: ENSG00000125823Ensembl transcript IDs: ENST00000246020.2, ENST00000347397.5, ENST00000472140.5, ENST00000485969.1, ENST00000619238.1
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GAGCCTCAGTTGGGAGGAGCTGGGCGTGAAGCCCCCAGAGGCACCTaGCAGCCCTCCACGCCTGCTCTTGTCCCCTCTGTAATCTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: EPQLGGAGREAPRGT*QPSTPALVPSVISA Trigger: AGCTGAGATTACAGAGGGGACAAGAGCAGGCGTGGAGGGCTGCCAGGTGCCTCTGGGGGCTTCACGCCCAGCTCCTCCCAACTGAGGCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000485969.1 |
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| CDS CCA 90 bp | CTGAGGTCTGGAGAGTCTGGATGTCACTTGACCAGGAGCCTCAGTTaGGAGGAGCTGGGCGTGAAGCCCCCAGAGGCACCTGGCAGCCCT | + |
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Preference number: 5 (lower is better) Translates to: LRSGESGCHLTRSLS*EELGVKPPEAPGSP Trigger: AGGGCTGCCAGGTGCCTCTGGGGGCTTCACGCCCAGCTCCTCCCAACTGAGGCTCCTGGTCAAGTGACATCCAGACTCTCCAGACCTCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000485969.1 |
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| CDS TCA 90 bp | CTTCTGCTGGAAGCCCTCCCACCTTTGGAAGTGACCCAGCTTGGCTaGCAGGACCAGGGCAATCAGCAGCAGCAGGGGGTTTCTCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: LLLEALPPLEVTQLG*QDQGNQQQQGVSPA Trigger: TGCTGGAGAAACCCCCTGCTGCTGCTGATTGCCCTGGTCCTGTCAGCCAAGCTGGGTCACTTCCAAAGGTGGGAGGGCTTCCAGCAGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000246020.2 ENST00000347397.5 ENST00000472140.5 ENST00000619238.1 |
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| CDS TCA 90 bp | TTCTTGCTCATGAGCTTCTGCTGGAAGCCCTCCCACCTTTGGAAGTaGCCCAGCTTGGCTGACAGGACCAGGGCAATCAGCAGCAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: FLLMSFCWKPSHLWK*PSLADRTRAISSSR Trigger: CCTGCTGCTGCTGATTGCCCTGGTCCTGTCAGCCAAGCTGGGTCACTTCCAAAGGTGGGAGGGCTTCCAGCAGAAGCTCATGAGCAAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000246020.2 ENST00000347397.5 ENST00000472140.5 ENST00000619238.1 |
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| CDS GCA 90 bp | TTCCTTGGGTTCCAACTGTCTTACAAAGCCACCACCTGTTCCCTGTaGTTCCTTTACAGACACGTTCTCCTTGCTCACCTGCCGCCCGCC | + |
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Preference number: 5 (lower is better) Translates to: FLGFQLSYKATTCSL*FLYRHVLLAHLPPA Trigger: GGCGGGCGGCAGGTGAGCAAGGAGAACGTGTCTGTAAAGGAAGCACAGGGAACAGGTGGTGGCTTTGTAAGACAGTTGGAACCCAAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000347397.5 ENST00000472140.5 ENST00000619238.1 |
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| CDS GCA 90 bp | GCATCCGATCCCCATGTCTACAGCCTCAGAAACTTTCTTCCCAACTaGACCTTCCAGGGTGTGGTGGTGCCAGGCTGCAGTTCACTCATT | + |
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Preference number: 5 (lower is better) Translates to: ASDPHVYSLRNFLPN*TFQGVVVPGCSSLI Trigger: AATGAGTGAACTGCAGCCTGGCACCACCACACCCTGGAAGGTGCAGTTGGGAAGAAAGTTTCTGAGGCTGTAGACATGGGGATCGGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000347397.5 ENST00000472140.5 ENST00000619238.1 |
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| CDS CCA 90 bp | ATTCTGAGGCACTTTGCAGGTGAAGAAACTGAGGTCTGGAGAGTCTaGATGTCACTTGACCAGGAGCCTCAGTTGGGAGGAGCTGGGCGT | + |
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Preference number: 5 (lower is better) Translates to: ILRHFAGEETEVWRV*MSLDQEPQLGGAGR Trigger: ACGCCCAGCTCCTCCCAACTGAGGCTCCTGGTCAAGTGACATCCAGACTCTCCAGACCTCAGTTTCTTCACCTGCAAAGTGCCTCAGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485969.1 |
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| CDS CCA 90 bp | ACAGCCTCAGAAACTTTCTTCCCAACTGCACCTTCCAGGGTGTGGTaGTGCCAGGCTGCAGTTCACTCATTCTCCCATCATAACCCTCAC | + |
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Preference number: 5 (lower is better) Translates to: TASETFFPTAPSRVW*CQAAVHSFSHHNPH Trigger: GTGAGGGTTATGATGGGAGAATGAGTGAACTGCAGCCTGGCACCACCACACCCTGGAAGGTGCAGTTGGGAAGAAAGTTTCTGAGGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000347397.5 ENST00000472140.5 ENST00000619238.1 |
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| CDS CCA 90 bp | TTCCCTCCTATTCTGAGGCACTTTGCAGGTGAAGAAACTGAGGTCTaGAGAGTCTGGATGTCACTTGACCAGGAGCCTCAGTTGGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: FPPILRHFAGEETEV*RVWMSLDQEPQLGG Trigger: TCCTCCCAACTGAGGCTCCTGGTCAAGTGACATCCAGACTCTCCAGACCTCAGTTTCTTCACCTGCAAAGTGCCTCAGAATAGGAGGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485969.1 |
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| CDS CCA 90 bp | CCAGACAGGAATTGTTCCAGAGCTGGAAATAGTTTATCCAGGGCATaGTGTATATCAAAGACTCGCAAATTAAACTCTTTCTCAGCTTCT | + |
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Preference number: 5 (lower is better) Translates to: PDRNCSRAGNSLSRA*CISKTRKLNSFSAS Trigger: AGAAGCTGAGAAAGAGTTTAATTTGCGAGTCTTTGATATACACCATGCCCTGGATAAACTATTTCCAGCTCTGGAACAATTCCTGTCTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000246020.2 ENST00000347397.5 |
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| CDS CCA 72 bp | TTGGGAGGAGCTGGGCGTGAAGCCCCCAGAGGCACCTaGCAGCCCTCCACGCCTGCTCTTGTCCCCTCTGTA | + |
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Preference number: 6 (lower is better) Translates to: LGGAGREAPRGT*QPSTPALVPSV Trigger: TACAGAGGGGACAAGAGCAGGCGTGGAGGGCTGCCAGGTGCCTCTGGGGGCTTCACGCCCAGCTCCTCCCAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000485969.1 |
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| CDS CAA 72 bp | CCTGTTCCCTGTGCTTCCTTTACAGACACGTTCTCCTaGCTCACCTGCCGCCCGCCCACCACAGATTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: PVPCASFTDTFS*LTCRPPTTDFC Trigger: GCAGAAATCTGTGGTGGGCGGGCGGCAGGTGAGCAAGGAGAACGTGTCTGTAAAGGAAGCACAGGGAACAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000347397.5 ENST00000472140.5 ENST00000619238.1 |
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| CDS CAA 90 bp | ACTTTGCAGGTGAAGAAACTGAGGTCTGGAGAGTCTGGATGTCACTaGACCAGGAGCCTCAGTTGGGAGGAGCTGGGCGTGAAGCCCCCA | + |
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Preference number: 6 (lower is better) Translates to: TLQVKKLRSGESGCH*TRSLSWEELGVKPP Trigger: TGGGGGCTTCACGCCCAGCTCCTCCCAACTGAGGCTCCTGGTCAAGTGACATCCAGACTCTCCAGACCTCAGTTTCTTCACCTGCAAAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000485969.1 |
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| CDS GCA 72 bp | CTGTTCCCTGTGCTTCCTTTACAGACACGTTCTCCTTaGTCACCTGCCGCCCGCCCACCACAGATTTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: LFPVLPLQTRSP*SPAARPPQISA Trigger: AGCAGAAATCTGTGGTGGGCGGGCGGCAGGTGAGCAAGGAGAACGTGTCTGTAAAGGAAGCACAGGGAACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000347397.5 ENST00000472140.5 ENST00000619238.1 |
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| CDS GCA 72 bp | CCCCATGTCTACAGCCTCAGAAACTTTCTTCCCAACTaGACCTTCCAGGGTGTGGTGGTGCCAGGCTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: PHVYSLRNFLPN*TFQGVVVPGCS Trigger: ACTGCAGCCTGGCACCACCACACCCTGGAAGGTGCAGTTGGGAAGAAAGTTTCTGAGGCTGTAGACATGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000347397.5 ENST00000472140.5 ENST00000619238.1 |
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| CDS GCA 72 bp | TGTGCTTCCTTTACAGACACGTTCTCCTTGCTCACCTaGCGCCCGCCCACCACAGATTTCTGCTTGCAGGAT | + |
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Preference number: 6 (lower is better) Translates to: CASFTDTFSLLT*RPPTTDFCLQD Trigger: ATCCTGCAAGCAGAAATCTGTGGTGGGCGGGCGGCAGGTGAGCAAGGAGAACGTGTCTGTAAAGGAAGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000347397.5 ENST00000472140.5 ENST00000619238.1 |
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| CDS CCA 72 bp | TTCTCCCATCATAACCCTCACCAACATAGGCTTTCCTaGGGGATGGCCTGCCTTCCTTGGGTTCCAACTGTC | + |
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Preference number: 6 (lower is better) Translates to: FSHHNPHQHRLS*GMACLPWVPTV Trigger: GACAGTTGGAACCCAAGGAAGGCAGGCCATCCCCCAGGAAAGCCTATGTTGGTGAGGGTTATGATGGGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000347397.5 ENST00000472140.5 ENST00000619238.1 |
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| CDS CCA 72 bp | GAAACTTTCTTCCCAACTGCACCTTCCAGGGTGTGGTaGTGCCAGGCTGCAGTTCACTCATTCTCCCATCAT | + |
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Preference number: 6 (lower is better) Translates to: ETFFPTAPSRVW*CQAAVHSFSHH Trigger: ATGATGGGAGAATGAGTGAACTGCAGCCTGGCACCACCACACCCTGGAAGGTGCAGTTGGGAAGAAAGTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000347397.5 ENST00000472140.5 ENST00000619238.1 |
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| CDS GCA 72 bp | GACTCGCAAATTAAACTCTTTCTCAGCTTCTTGCTTTaGAGGGGGCAGGAAGAATTGCTCGTGTCATTCCTC | + |
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Preference number: 6 (lower is better) Translates to: DSQIKLFLSFLL*RGQEELLVSFL Trigger: GAGGAATGACACGAGCAATTCTTCCTGCCCCCTGCAAAGCAAGAAGCTGAGAAAGAGTTTAATTTGCGAGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000246020.2 ENST00000347397.5 |
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