Pregenerated sensors for CSTA (Homo sapiens)
Ensembl gene IDs: ENSG00000121552Ensembl transcript IDs: ENST00000264474.4, ENST00000479204.1
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGCTTCAAGATACCATGTGGTCCAGCCCCACACCTTCAGGCAGATaGGACGTGATCCTCCCTCCTTACCTAAGCAGCAGCACAGCCACA | + |
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Preference number: 1 (lower is better) Translates to: QLQDTMWSSPTPSGR*DVILPPYLSSSTAT Trigger: TGTGGCTGTGCTGCTGCTTAGGTAAGGAGGGAGGATCACGTCTCATCTGCCTGAAGGTGTGGGGCTGGACCACATGGTATCTTGAAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479204.1 |
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| 3UTR TCA 90 bp | ATGGAATGTTGGGTTATCAGCAGCCACAGGGAACAAGGAGGCTGGTaGATTGATAGTCCACGATCCAGCCTGCCTATGGTGGGGGTGAGG | + |
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Preference number: 1 (lower is better) Translates to: MECWVISSHREQGGW*IDSPRSSLPMVGVR Trigger: CCTCACCCCCACCATAGGCAGGCTGGATCGTGGACTATCAATTCACCAGCCTCCTTGTTCCCTGTGGCTGCTGATAACCCAACATTCCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000264474.4 |
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| 3UTR-3UTR TCA 90 bp | GGTAGAGATGGAATGTTGGGTTATCAGCAGCCACAGGGAACAAGGAGGCTGGTGTGCCTATGGTGGGGGTaGGGGTGGTACTATCCTTTA | + |
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Preference number: 2 (lower is better) Translates to: GRDGMLGYQQPQGTRRLVCLWWG*GWYYPL Trigger: TAAAGGATAGTACCACCCTCACCCCCACCATAGGCA...CACCAGCCTCCTTGTTCCCTGTGGCTGCTGATAACCCAACATTCCATCTCTACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000264474.4 |
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| 3UTR-3UTR TCA 90 bp | AGGGTAGAGATGGAATGTTGGGTTATCAGCAGCCACAGGGAACAAGGAGGCTGGTATCAGCAAGGATCATaGCTCAGTAGCCAGTTGAAG | + |
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Preference number: 2 (lower is better) Translates to: RVEMECWVISSHREQGGWYQQGS*LSSQLK Trigger: CTTCAACTGGCTACTGAGTCATGATCCTTGCTGATA...CCAGCCTCCTTGTTCCCTGTGGCTGCTGATAACCCAACATTCCATCTCTACCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264474.4 |
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| 3UTR-3UTR TCA 90 bp | GAGGTAGAATCAGCTTCAAGATACCATGTGGTCCAGCCCCACACCTTCAGGCAGATCATCTACCAAATTTaGGAGTCCACCACTTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: EVESASRYHVVQPHTFRQIIYQI*ESTTWK Trigger: CTTCCAAGTGGTGGACTCTCAAATTTGGTAGATGAT...CTGCCTGAAGGTGTGGGGCTGGACCACATGGTATCTTGAAGCTGATTCTACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479204.1 |
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| 3UTR-3UTR TCA 90 bp | AGATGGAATGTTGGGTTATCAGCAGCCACAGGGAACAAGGAGGCTGGTGAATTGGACTCAGTAGCCAGTTaGAGGAATCAGAACACTTTG | + |
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Preference number: 2 (lower is better) Translates to: RWNVGLSAATGNKEAGELDSVAS*RNQNTL Trigger: CAAAGTGTTCTGATTCCTTCAACTGGCTACTGAGTC...CAATTCACCAGCCTCCTTGTTCCCTGTGGCTGCTGATAACCCAACATTCCATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264474.4 |
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| 3UTR-3UTR TCA 90 bp | AGAGAATCATACAGCTTTGAGGTAGAATCAGCTTCAAGATACCATGTGGTCCAGACACCTTCAGGCAGATaGGACGTGATCCTCCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: RESYSFEVESASRYHVVQTPSGR*DVILPP Trigger: AGGAGGGAGGATCACGTCTCATCTGCCTGAAGGTGT...CTGGACCACATGGTATCTTGAAGCTGATTCTACCTCAAAGCTGTATGATTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479204.1 |
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| 3UTR TCA 72 bp | TGGGTTATCAGCAGCCACAGGGAACAAGGAGGCTGGTaGATTGATAGTCCACGATCCAGCCTGCCTATGGTG | + |
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Preference number: 3 (lower is better) Translates to: WVISSHREQGGW*IDSPRSSLPMV Trigger: CACCATAGGCAGGCTGGATCGTGGACTATCAATTCACCAGCCTCCTTGTTCCCTGTGGCTGCTGATAACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264474.4 |
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| 3UTR-3UTR CAA 90 bp | AGAGAATCATACAGCTTTGAGGTAGAATCAGCTTCAAGATACCATGTGGTCCAGTTGAGAGTCCACCACTaGGAAGGAATCATGCTGGGC | + |
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Preference number: 3 (lower is better) Translates to: RESYSFEVESASRYHVVQLRVHH*EGIMLG Trigger: GCCCAGCATGATTCCTTCCAAGTGGTGGACTCTCAA...CTGGACCACATGGTATCTTGAAGCTGATTCTACCTCAAAGCTGTATGATTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479204.1 |
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| 3UTR TCA 72 bp | CCTAAGCAGCAGCACAGCCACAAATCCAGCATGCCCTaGACTGTTATGAAATCTTTTTCTATACAATTTCCA | + |
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Preference number: 3 (lower is better) Translates to: PKQQHSHKSSMP*TVMKSFSIQFP Trigger: TGGAAATTGTATAGAAAAAGATTTCATAACAGTTCAGGGCATGCTGGATTTGTGGCTGTGCTGCTGCTTAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000479204.1 |
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| CDS-3UTR TCA 90 bp | AGGGTAGAGATGGAATGTTGGGTTATCAGCAGCCACAGGGAACAAGGAGGCTGGTGCCTATGGTGGGGGTaGGGGTGGTACTATCCTTTA | + |
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Preference number: 4 (lower is better) Translates to: RVEMECWVISSHREQGGWCLWWG*GWYYPL Trigger: TAAAGGATAGTACCACCCTCACCCCCACCATAGGCA...CCAGCCTCCTTGTTCCCTGTGGCTGCTGATAACCCAACATTCCATCTCTACCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000264474.4 |
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| CDS-3UTR CCA 90 bp | TTATCAGCAGCCACAGGGAACAAGGAGGCTGGTGAATTGATAGTCCACGATCCACTGGAGTGGCGGGTTTaGCCTCAGATAAGCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: LSAATGNKEAGELIVHDPLEWRV*PQISLQ Trigger: CTGGAGGCTTATCTGAGGCCAAACCCGCCACTCCAG...TGGATCGTGGACTATCAATTCACCAGCCTCCTTGTTCCCTGTGGCTGCTGATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264474.4 |
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| CDS-3UTR CCA 90 bp | AGATGGAATGTTGGGTTATCAGCAGCCACAGGGAACAAGGAGGCTGGTGAATTGCCTGGATTTCTGGAGTaGCGGGTTTGGCCTCAGATA | + |
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Preference number: 4 (lower is better) Translates to: RWNVGLSAATGNKEAGELPGFLE*RVWPQI Trigger: TATCTGAGGCCAAACCCGCCACTCCAGAAATCCAGG...CAATTCACCAGCCTCCTTGTTCCCTGTGGCTGCTGATAACCCAACATTCCATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264474.4 |
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| CDS-3UTR CCA 90 bp | TATGAGGGTAGAGATGGAATGTTGGGTTATCAGCAGCCACAGGGAACAAGGAGGAATCTCCTGGATTTCTaGAGTGGCGGGTTTGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: YEGRDGMLGYQQPQGTRRNLLDF*SGGFGL Trigger: GAGGCCAAACCCGCCACTCCAGAAATCCAGGAGATT...CCTCCTTGTTCCCTGTGGCTGCTGATAACCCAACATTCCATCTCTACCCTCATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264474.4 |
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| CDS-3UTR CCA 90 bp | GGTAGAGATGGAATGTTGGGTTATCAGCAGCCACAGGGAACAAGGAGGCTGGTGGTAGAGATGGAATGTTaGGTTATCAGCAGCCACAGG | + |
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Preference number: 4 (lower is better) Translates to: GRDGMLGYQQPQGTRRLVVEMEC*VISSHR Trigger: CCTGTGGCTGCTGATAACCCAACATTCCATCTCTAC...CACCAGCCTCCTTGTTCCCTGTGGCTGCTGATAACCCAACATTCCATCTCTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264474.4 |
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| CDS-3UTR TCA 90 bp | TATGAGGGTAGAGATGGAATGTTGGGTTATCAGCAGCCACAGGGAACAAGGAGGGAACAAGGAGGCTGGTaGATTGATAGTCCACGATCC | + |
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Preference number: 4 (lower is better) Translates to: YEGRDGMLGYQQPQGTRREQGGW*IDSPRS Trigger: GGATCGTGGACTATCAATTCACCAGCCTCCTTGTTC...CCTCCTTGTTCCCTGTGGCTGCTGATAACCCAACATTCCATCTCTACCCTCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264474.4 |
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| CDS-3UTR TCA 90 bp | CATCATCTACCAAATTTGAGAGTCCACCACTTGGAAGGAATCATGCTGGGCATCACACCTTCAGGCAGATaGGACGTGATCCTCCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: HHLPNLRVHHLEGIMLGITPSGR*DVILPP Trigger: AGGAGGGAGGATCACGTCTCATCTGCCTGAAGGTGT...GATGCCCAGCATGATTCCTTCCAAGTGGTGGACTCTCAAATTTGGTAGATGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479204.1 |
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| CDS-3UTR CCA 90 bp | ATGAGACGTGATCCTCCCTCCTTACCTAAGCAGCAGCACAGCCACAAATCCAGCTTATCAACAATCTCCTaGATTTCTGGAGTGGCGGGT | + |
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Preference number: 4 (lower is better) Translates to: MRRDPPSLPKQQHSHKSSLSTIS*ISGVAG Trigger: ACCCGCCACTCCAGAAATCCAGGAGATTGTTGATAA...GCTGGATTTGTGGCTGTGCTGCTGCTTAGGTAAGGAGGGAGGATCACGTCTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479204.1 |
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| CDS-3UTR TCA 90 bp | GGTAGAGATGGAATGTTGGGTTATCAGCAGCCACAGGGAACAAGGAGGCTGGTGAGGTATCATTTTGGCTaGTTGCTTCTTTGCTGGACA | + |
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Preference number: 4 (lower is better) Translates to: GRDGMLGYQQPQGTRRLVRYHFG*LLLCWT Trigger: TGTCCAGCAAAGAAGCAATCAGCCAAAATGATACCT...CACCAGCCTCCTTGTTCCCTGTGGCTGCTGATAACCCAACATTCCATCTCTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264474.4 |
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| CDS-3UTR TCA 90 bp | ATGAGACGTGATCCTCCCTCCTTACCTAAGCAGCAGCACAGCCACAAATCCAGCAGGTATCATTTTGGCTaGTTGCTTCTTTGCTGGACA | + |
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Preference number: 4 (lower is better) Translates to: MRRDPPSLPKQQHSHKSSRYHFG*LLLCWT Trigger: TGTCCAGCAAAGAAGCAATCAGCCAAAATGATACCT...GCTGGATTTGTGGCTGTGCTGCTGCTTAGGTAAGGAGGGAGGATCACGTCTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479204.1 |
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| CDS-3UTR TCA 90 bp | GAGGTAGAATCAGCTTCAAGATACCATGTGGTCCAGCCCCACACCTTCAGGCAGGTTCCAGCAACAACTTaGGTTTTATACTGCACAGCT | + |
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Preference number: 4 (lower is better) Translates to: EVESASRYHVVQPHTFRQVPATT*VLYCTA Trigger: AGCTGTGCAGTATAAAACTCAAGTTGTTGCTGGAAC...CTGCCTGAAGGTGTGGGGCTGGACCACATGGTATCTTGAAGCTGATTCTACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479204.1 |
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| CDS-3UTR CCA 90 bp | AGAGAATCATACAGCTTTGAGGTAGAATCAGCTTCAAGATACCATGTGGTCCAGCTGGAGTGGCGGGTTTaGCCTCAGATAAGCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: RESYSFEVESASRYHVVQLEWRV*PQISLQ Trigger: CTGGAGGCTTATCTGAGGCCAAACCCGCCACTCCAG...CTGGACCACATGGTATCTTGAAGCTGATTCTACCTCAAAGCTGTATGATTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479204.1 |
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| CDS-3UTR CCA 90 bp | CATCATCTACCAAATTTGAGAGTCCACCACTTGGAAGGAATCATGCTGGGCATCAATCTCCTGGATTTCTaGAGTGGCGGGTTTGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: HHLPNLRVHHLEGIMLGINLLDF*SGGFGL Trigger: GAGGCCAAACCCGCCACTCCAGAAATCCAGGAGATT...GATGCCCAGCATGATTCCTTCCAAGTGGTGGACTCTCAAATTTGGTAGATGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479204.1 |
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| CDS-3UTR CCA 90 bp | GGTAGAGATGGAATGTTGGGTTATCAGCAGCCACAGGGAACAAGGAGGCTGGTGGGAATCAGAACACTTTaGGTACATGCTGCTAAAAGC | + |
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Preference number: 4 (lower is better) Translates to: GRDGMLGYQQPQGTRRLVGIRTL*VHAAKS Trigger: GCTTTTAGCAGCATGTACCCAAAGTGTTCTGATTCC...CACCAGCCTCCTTGTTCCCTGTGGCTGCTGATAACCCAACATTCCATCTCTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264474.4 |
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| CDS-3UTR TCA 90 bp | TTATCAGCAGCCACAGGGAACAAGGAGGCTGGTGAATTGATAGTCCACGATCCATATCAGCAAGGATCATaGCTCAGTAGCCAGTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: LSAATGNKEAGELIVHDPYQQGS*LSSQLK Trigger: CTTCAACTGGCTACTGAGTCATGATCCTTGCTGATA...TGGATCGTGGACTATCAATTCACCAGCCTCCTTGTTCCCTGTGGCTGCTGATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264474.4 |
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| CDS-3UTR CCA 90 bp | TTATCAGCAGCCACAGGGAACAAGGAGGCTGGTGAATTGATAGTCCACGATCCATTATCAACAATCTCCTaGATTTCTGGAGTGGCGGGT | + |
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Preference number: 4 (lower is better) Translates to: LSAATGNKEAGELIVHDPLSTIS*ISGVAG Trigger: ACCCGCCACTCCAGAAATCCAGGAGATTGTTGATAA...TGGATCGTGGACTATCAATTCACCAGCCTCCTTGTTCCCTGTGGCTGCTGATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264474.4 |
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| CDS-3UTR TCA 90 bp | TATGAGGGTAGAGATGGAATGTTGGGTTATCAGCAGCCACAGGGAACAAGGAGGGTTCCAGCAACAACTTaGGTTTTATACTGCACAGCT | + |
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Preference number: 4 (lower is better) Translates to: YEGRDGMLGYQQPQGTRRVPATT*VLYCTA Trigger: AGCTGTGCAGTATAAAACTCAAGTTGTTGCTGGAAC...CCTCCTTGTTCCCTGTGGCTGCTGATAACCCAACATTCCATCTCTACCCTCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264474.4 |
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| CDS-3UTR CCA 90 bp | TTATCAGCAGCCACAGGGAACAAGGAGGCTGGTGAATTGATAGTCCACGATCCACTCCAGGTATCATTTTaGCTGATTGCTTCTTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: LSAATGNKEAGELIVHDPLQVSF*LIASLL Trigger: CAGCAAAGAAGCAATCAGCCAAAATGATACCTGGAG...TGGATCGTGGACTATCAATTCACCAGCCTCCTTGTTCCCTGTGGCTGCTGATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264474.4 |
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| CDS-3UTR TCA 90 bp | TATGAGGGTAGAGATGGAATGTTGGGTTATCAGCAGCCACAGGGAACAAGGAGGGTCCGGGAAGACTTTTaGATACTTTCAAGTGCATAT | + |
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Preference number: 4 (lower is better) Translates to: YEGRDGMLGYQQPQGTRRVREDF*ILSSAY Trigger: ATATGCACTTGAAAGTATTCAAAAGTCTTCCCGGAC...CCTCCTTGTTCCCTGTGGCTGCTGATAACCCAACATTCCATCTCTACCCTCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264474.4 |
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| CDS-3UTR GCA 90 bp | AGATGGAATGTTGGGTTATCAGCAGCCACAGGGAACAAGGAGGCTGGTGAATTGATCATTTTGGCTGATTaGTTCTTTGCTGGACAGGAT | + |
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Preference number: 4 (lower is better) Translates to: RWNVGLSAATGNKEAGELIILAD*FFAGQD Trigger: ATCCTGTCCAGCAAAGAAGCAATCAGCCAAAATGAT...CAATTCACCAGCCTCCTTGTTCCCTGTGGCTGCTGATAACCCAACATTCCATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264474.4 |
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| CDS-3UTR CCA 90 bp | AGAGAATCATACAGCTTTGAGGTAGAATCAGCTTCAAGATACCATGTGGTCCAGCTTCAAGATACCATGTaGTCCAGCCCCACACCTTCA | + |
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Preference number: 4 (lower is better) Translates to: RESYSFEVESASRYHVVQLQDTM*SSPTPS Trigger: TGAAGGTGTGGGGCTGGACCACATGGTATCTTGAAG...CTGGACCACATGGTATCTTGAAGCTGATTCTACCTCAAAGCTGTATGATTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479204.1 |
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| CDS-3UTR CCA 90 bp | TTATCAGCAGCCACAGGGAACAAGGAGGCTGGTGAATTGATAGTCCACGATCCATTGTTTTTGTCAACCTaGTATCCAGTAAGTACCAAG | + |
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Preference number: 4 (lower is better) Translates to: LSAATGNKEAGELIVHDPLFLST*YPVSTK Trigger: CTTGGTACTTACTGGATACCAGGTTGACAAAAACAA...TGGATCGTGGACTATCAATTCACCAGCCTCCTTGTTCCCTGTGGCTGCTGATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000264474.4 |
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| CDS-3UTR TCA 90 bp | GTCACATCATCTACCAAATTTGAGAGTCCACCACTTGGAAGGAATCATGCTGGGAGAATCATACAGCTTTaGGGTAGAATCAGCTTCAAG | + |
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Preference number: 4 (lower is better) Translates to: VTSSTKFESPPLGRNHAGRIIQL*GRISFK Trigger: CTTGAAGCTGATTCTACCTCAAAGCTGTATGATTCT...CCCAGCATGATTCCTTCCAAGTGGTGGACTCTCAAATTTGGTAGATGATGTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479204.1 |
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| CDS-3UTR TCA 90 bp | AGAGAATCATACAGCTTTGAGGTAGAATCAGCTTCAAGATACCATGTGGTCCAGATCATCTACCAAATTTaGGAGTCCACCACTTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: RESYSFEVESASRYHVVQIIYQI*ESTTWK Trigger: CTTCCAAGTGGTGGACTCTCAAATTTGGTAGATGAT...CTGGACCACATGGTATCTTGAAGCTGATTCTACCTCAAAGCTGTATGATTCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479204.1 |
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| CDS-3UTR GCA 90 bp | GTCACATCATCTACCAAATTTGAGAGTCCACCACTTGGAAGGAATCATGCTGGGCACTCTTTTAAACTATaGCTAGAGTGCCACAAGTTA | + |
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Preference number: 4 (lower is better) Translates to: VTSSTKFESPPLGRNHAGHSFKL*LECHKL Trigger: TAACTTGTGGCACTCTAGGCATAGTTTAAAAGAGTG...CCCAGCATGATTCCTTCCAAGTGGTGGACTCTCAAATTTGGTAGATGATGTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479204.1 |
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| CDS-3UTR CCA 90 bp | AGAGAATCATACAGCTTTGAGGTAGAATCAGCTTCAAGATACCATGTGGTCCAGCTCCAGGTATCATTTTaGCTGATTGCTTCTTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: RESYSFEVESASRYHVVQLQVSF*LIASLL Trigger: CAGCAAAGAAGCAATCAGCCAAAATGATACCTGGAG...CTGGACCACATGGTATCTTGAAGCTGATTCTACCTCAAAGCTGTATGATTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479204.1 |
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| CDS-3UTR GCA 90 bp | AGAGAATCATACAGCTTTGAGGTAGAATCAGCTTCAAGATACCATGTGGTCCAGATCATTTTGGCTGATTaGTTCTTTGCTGGACAGGAT | + |
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Preference number: 4 (lower is better) Translates to: RESYSFEVESASRYHVVQIILAD*FFAGQD Trigger: ATCCTGTCCAGCAAAGAAGCAATCAGCCAAAATGAT...CTGGACCACATGGTATCTTGAAGCTGATTCTACCTCAAAGCTGTATGATTCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479204.1 |
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| CDS-3UTR TCA 90 bp | AGAGAATCATACAGCTTTGAGGTAGAATCAGCTTCAAGATACCATGTGGTCCAGAAATCCAGCATGCCCTaGACTGTTATGAAATCTTTT | + |
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Preference number: 4 (lower is better) Translates to: RESYSFEVESASRYHVVQKSSMP*TVMKSF Trigger: AAAAGATTTCATAACAGTTCAGGGCATGCTGGATTT...CTGGACCACATGGTATCTTGAAGCTGATTCTACCTCAAAGCTGTATGATTCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479204.1 |
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| CDS-3UTR CAA 90 bp | AGGGTAGAGATGGAATGTTGGGTTATCAGCAGCCACAGGGAACAAGGAGGCTGGTCTGGAGTGGCGGGTTaGGCCTCAGATAAGCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: RVEMECWVISSHREQGGWSGVAG*ASDKPP Trigger: TGGAGGCTTATCTGAGGCCAAACCCGCCACTCCAGA...CCAGCCTCCTTGTTCCCTGTGGCTGCTGATAACCCAACATTCCATCTCTACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264474.4 |
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| CDS-3UTR CAA 90 bp | GGTAGAGATGGAATGTTGGGTTATCAGCAGCCACAGGGAACAAGGAGGCTGGTGAAGGAGGCTGGTGAATaGATAGTCCACGATCCAGCC | + |
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Preference number: 5 (lower is better) Translates to: GRDGMLGYQQPQGTRRLVKEAGE*IVHDPA Trigger: GGCTGGATCGTGGACTATCAATTCACCAGCCTCCTT...CACCAGCCTCCTTGTTCCCTGTGGCTGCTGATAACCCAACATTCCATCTCTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264474.4 |
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| CDS-3UTR CAA 90 bp | GAGGTAGAATCAGCTTCAAGATACCATGTGGTCCAGCCCCACACCTTCAGGCAGTTGAGAGTCCACCACTaGGAAGGAATCATGCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: EVESASRYHVVQPHTFRQLRVHH*EGIMLG Trigger: GCCCAGCATGATTCCTTCCAAGTGGTGGACTCTCAA...CTGCCTGAAGGTGTGGGGCTGGACCACATGGTATCTTGAAGCTGATTCTACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479204.1 |
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| CDS-3UTR CAA 90 bp | AGGGTAGAGATGGAATGTTGGGTTATCAGCAGCCACAGGGAACAAGGAGGCTGGTGGCTGATTGCTTCTTaGCTGGACAGGATGCTGGAA | + |
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Preference number: 5 (lower is better) Translates to: RVEMECWVISSHREQGGWWLIAS*LDRMLE Trigger: TTCCAGCATCCTGTCCAGCAAAGAAGCAATCAGCCA...CCAGCCTCCTTGTTCCCTGTGGCTGCTGATAACCCAACATTCCATCTCTACCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264474.4 |
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| CDS-3UTR CAA 90 bp | AGGGTAGAGATGGAATGTTGGGTTATCAGCAGCCACAGGGAACAAGGAGGCTGGGGTAGAGATGGAATGTaGGGTTATCAGCAGCCACAG | + |
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Preference number: 5 (lower is better) Translates to: RVEMECWVISSHREQGGWGRDGM*GYQQPQ Trigger: CTGTGGCTGCTGATAACCCAACATTCCATCTCTACC...CCAGCCTCCTTGTTCCCTGTGGCTGCTGATAACCCAACATTCCATCTCTACCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264474.4 |
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| CDS-3UTR CAA 90 bp | GGTAGAGATGGAATGTTGGGTTATCAGCAGCCACAGGGAACAAGGAGGCTGGTGCCTCCAGGTATCATTTaGGCTGATTGCTTCTTTGCT | + |
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Preference number: 5 (lower is better) Translates to: GRDGMLGYQQPQGTRRLVPPGII*ADCFFA Trigger: AGCAAAGAAGCAATCAGCCAAAATGATACCTGGAGG...CACCAGCCTCCTTGTTCCCTGTGGCTGCTGATAACCCAACATTCCATCTCTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000264474.4 |
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| CDS-3UTR CAA 90 bp | AGAGAATCATACAGCTTTGAGGTAGAATCAGCTTCAAGATACCATGTGGTCCAGTCTGGAGTGGCGGGTTaGGCCTCAGATAAGCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: RESYSFEVESASRYHVVQSGVAG*ASDKPP Trigger: TGGAGGCTTATCTGAGGCCAAACCCGCCACTCCAGA...CTGGACCACATGGTATCTTGAAGCTGATTCTACCTCAAAGCTGTATGATTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479204.1 |
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| CDS-3UTR CAA 90 bp | AGGGTAGAGATGGAATGTTGGGTTATCAGCAGCCACAGGGAACAAGGAGGCTGGTCGTCATCCTTGTTTTaGTCAACCTGGTATCCAGTA | + |
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Preference number: 5 (lower is better) Translates to: RVEMECWVISSHREQGGWSSSLF*STWYPV Trigger: TACTGGATACCAGGTTGACAAAAACAAGGATGACGA...CCAGCCTCCTTGTTCCCTGTGGCTGCTGATAACCCAACATTCCATCTCTACCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264474.4 |
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| CDS-3UTR CAA 90 bp | GAGGTAGAATCAGCTTCAAGATACCATGTGGTCCAGCCCCACACCTTCAGGCAGCATCATCTACCAAATTaGAGAGTCCACCACTTGGAA | + |
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Preference number: 5 (lower is better) Translates to: EVESASRYHVVQPHTFRQHHLPN*RVHHLE Trigger: TTCCAAGTGGTGGACTCTCAAATTTGGTAGATGATG...CTGCCTGAAGGTGTGGGGCTGGACCACATGGTATCTTGAAGCTGATTCTACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479204.1 |
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| CDS-3UTR CAA 90 bp | TATGAGGGTAGAGATGGAATGTTGGGTTATCAGCAGCCACAGGGAACAAGGAGGTGTTCCAGCAACAACTaGAGTTTTATACTGCACAGC | + |
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Preference number: 5 (lower is better) Translates to: YEGRDGMLGYQQPQGTRRCSSNN*SFILHS Trigger: GCTGTGCAGTATAAAACTCAAGTTGTTGCTGGAACA...CCTCCTTGTTCCCTGTGGCTGCTGATAACCCAACATTCCATCTCTACCCTCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264474.4 |
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| CDS-3UTR CAA 90 bp | TATGAGGGTAGAGATGGAATGTTGGGTTATCAGCAGCCACAGGGAACAAGGAGGTACCAAGTCCTCATTTaGTCCGGGAAGACTTTTGAA | + |
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Preference number: 5 (lower is better) Translates to: YEGRDGMLGYQQPQGTRRYQVLI*SGKTFE Trigger: TTCAAAAGTCTTCCCGGACAAAATGAGGACTTGGTA...CCTCCTTGTTCCCTGTGGCTGCTGATAACCCAACATTCCATCTCTACCCTCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000264474.4 |
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| CDS-3UTR CAA 90 bp | GTCACATCATCTACCAAATTTGAGAGTCCACCACTTGGAAGGAATCATGCTGGGTGTTCCAGCAACAACTaGAGTTTTATACTGCACAGC | + |
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Preference number: 5 (lower is better) Translates to: VTSSTKFESPPLGRNHAGCSSNN*SFILHS Trigger: GCTGTGCAGTATAAAACTCAAGTTGTTGCTGGAACA...CCCAGCATGATTCCTTCCAAGTGGTGGACTCTCAAATTTGGTAGATGATGTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479204.1 |
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| CDS-3UTR CAA 90 bp | AGAGAATCATACAGCTTTGAGGTAGAATCAGCTTCAAGATACCATGTGGTCCAGCCTCCAGGTATCATTTaGGCTGATTGCTTCTTTGCT | + |
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Preference number: 5 (lower is better) Translates to: RESYSFEVESASRYHVVQPPGII*ADCFFA Trigger: AGCAAAGAAGCAATCAGCCAAAATGATACCTGGAGG...CTGGACCACATGGTATCTTGAAGCTGATTCTACCTCAAAGCTGTATGATTCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479204.1 |
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| CDS CCA 72 bp | TATCAACAATCTCCTGGATTTCTGGAGTGGCGGGTTTaGCCTCAGATAAGCCTCCAGGTATCATTTTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: YQQSPGFLEWRV*PQISLQVSFWL Trigger: CAGCCAAAATGATACCTGGAGGCTTATCTGAGGCCAAACCCGCCACTCCAGAAATCCAGGAGATTGTTGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264474.4 ENST00000479204.1 |
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| CDS CAA 90 bp | GGTTTAACCTTATCAACAATCTCCTGGATTTCTGGAGTGGCGGGTTaGGCCTCAGATAAGCCTCCAGGTATCATTTTGGCTGATTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: GLTLSTISWISGVAG*ASDKPPGIILADCF Trigger: GAAGCAATCAGCCAAAATGATACCTGGAGGCTTATCTGAGGCCAAACCCGCCACTCCAGAAATCCAGGAGATTGTTGATAAGGTTAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264474.4 ENST00000479204.1 |
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| CDS CAA 72 bp | TTATCAACAATCTCCTGGATTTCTGGAGTGGCGGGTTaGGCCTCAGATAAGCCTCCAGGTATCATTTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: LSTISWISGVAG*ASDKPPGIILA Trigger: AGCCAAAATGATACCTGGAGGCTTATCTGAGGCCAAACCCGCCACTCCAGAAATCCAGGAGATTGTTGATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000264474.4 ENST00000479204.1 |
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| CDS CCA 72 bp | TCTTCAAGCTGTGGTTTAACCTTATCAACAATCTCCTaGATTTCTGGAGTGGCGGGTTTGGCCTCAGATAAG | + |
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Preference number: 6 (lower is better) Translates to: SSSCGLTLSTIS*ISGVAGLASDK Trigger: CTTATCTGAGGCCAAACCCGCCACTCCAGAAATCCAGGAGATTGTTGATAAGGTTAAACCACAGCTTGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000264474.4 ENST00000479204.1 |
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| CDS CAA 90 bp | ATCACCTGCTCGTACCTTAATGTAGTAATTTGTTCCAGCAACAACTaGAGTTTTATACTGCACAGCTTCCAATTTTCCGTAAGTCTCATT | + |
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Preference number: 6 (lower is better) Translates to: ITCSYLNVVICSSNN*SFILHSFQFSVSLI Trigger: AATGAGACTTACGGAAAATTGGAAGCTGTGCAGTATAAAACTCAAGTTGTTGCTGGAACAAATTACTACATTAAGGTACGAGCAGGTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264474.4 |
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| CDS CAA 90 bp | GTGCTGAACTCTAACCTTAATGTAGTAATTTGTTCCAGCAACAACTaGAGTTTTATACTGCACAGCTTCCAATTTTCCGTAAGTCTCATT | + |
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Preference number: 6 (lower is better) Translates to: VLNSNLNVVICSSNN*SFILHSFQFSVSLI Trigger: AATGAGACTTACGGAAAATTGGAAGCTGTGCAGTATAAAACTCAAGTTGTTGCTGGAACAAATTACTACATTAAGGTTAGAGTTCAGCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479204.1 |
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| CDS CAA 72 bp | TCGTACCTTAATGTAGTAATTTGTTCCAGCAACAACTaGAGTTTTATACTGCACAGCTTCCAATTTTCCGTA | + |
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Preference number: 6 (lower is better) Translates to: SYLNVVICSSNN*SFILHSFQFSV Trigger: TACGGAAAATTGGAAGCTGTGCAGTATAAAACTCAAGTTGTTGCTGGAACAAATTACTACATTAAGGTACGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264474.4 |
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| CDS CAA 72 bp | TCTAACCTTAATGTAGTAATTTGTTCCAGCAACAACTaGAGTTTTATACTGCACAGCTTCCAATTTTCCGTA | + |
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Preference number: 6 (lower is better) Translates to: SNLNVVICSSNN*SFILHSFQFSV Trigger: TACGGAAAATTGGAAGCTGTGCAGTATAAAACTCAAGTTGTTGCTGGAACAAATTACTACATTAAGGTTAGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479204.1 |
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