Pregenerated sensors for CST9L (Homo sapiens)
Ensembl gene IDs: ENSG00000101435Ensembl transcript IDs: ENST00000376979.4
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | ACAAACAAGTCCAAAGCTGCTCAGCCACTGAAGAGTCCTCAGGAGAGTAGTGCTGATGTCCACGGAATGTaGGAGCAGCACATGGACAAG | + |
|
Preference number: 2 (lower is better) Translates to: TNKSKAAQPLKSPQESSADVHGM*EQHMDK Trigger: CTTGTCCATGTGCTGCTCCCACATTCCGTGGACATC...AGCACTACTCTCCTGAGGACTCTTCAGTGGCTGAGCAGCTTTGGACTTGTTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376979.4 |
||
| CDS-3UTR CCA 90 bp | AGTCCTCAGGAGAGTAGTGCTGATGTCCACGGAATGTGGGAGCAGCACATGGACCAGCAAACTCCACTGTaGCAGGGAGGTAACGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SPQESSADVHGMWEQHMDQQTPL*QGGNEP Trigger: TGGCTCGTTACCTCCCTGCCACAGTGGAGTTTGCTG...GTCCATGTGCTGCTCCCACATTCCGTGGACATCAGCACTACTCTCCTGAGGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376979.4 |
||
| CDS-3UTR TCA 90 bp | AAGTCCAAAGCTGCTCAGCCACTGAAGAGTCCTCAGGAGAGTAGTGCTGATGTCTCTTGTTCAGGAGGCTaGACTGAGTCATCCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KSKAAQPLKSPQESSADVSCSGG*TESSRA Trigger: GGCCCTGGATGACTCAGTTCAGCCTCCTGAACAAGA...GACATCAGCACTACTCTCCTGAGGACTCTTCAGTGGCTGAGCAGCTTTGGACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376979.4 |
||
| CDS-3UTR GCA 90 bp | GCTGCTCAGCCACTGAAGAGTCCTCAGGAGAGTAGTGCTGATGTCCACGGAATGTCATCACAGTCCCTTTaGTCGTGGAAATGCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AAQPLKSPQESSADVHGMSSQSL*SWKCQA Trigger: TGCCTGGCATTTCCACGAGCAAAGGGACTGTGATGA...CATTCCGTGGACATCAGCACTACTCTCCTGAGGACTCTTCAGTGGCTGAGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376979.4 |
||
| CDS-3UTR CCA 90 bp | GCTGCTCAGCCACTGAAGAGTCCTCAGGAGAGTAGTGCTGATGTCCACGGAATGGGACAAGCCTGTGAGTaGGTTTCACTCAGTGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: AAQPLKSPQESSADVHGMGQACE*VSLSGI Trigger: GATTCCACTGAGTGAAACCCACTCACAGGCTTGTCC...CATTCCGTGGACATCAGCACTACTCTCCTGAGGACTCTTCAGTGGCTGAGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376979.4 |
||
| CDS-3UTR TCA 90 bp | GCTGCTCAGCCACTGAAGAGTCCTCAGGAGAGTAGTGCTGATGTCCACGGAATGGGAGGTAACGAGCCATaGCATTGTGTTCATCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: AAQPLKSPQESSADVHGMGGNEP*HCVHHS Trigger: ACTGTGATGAACACAATGTCATGGCTCGTTACCTCC...CATTCCGTGGACATCAGCACTACTCTCCTGAGGACTCTTCAGTGGCTGAGCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376979.4 |
||
| CDS-3UTR TCA 90 bp | GCTGCTCAGCCACTGAAGAGTCCTCAGGAGAGTAGTGCTGATGTCCACGGAATGCCTTGCTCTGTTGGTTaGATGTGTGGACAGCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: AAQPLKSPQESSADVHGMPCSVG*MCGQQT Trigger: AGTTTGCTGTCCACACATTCAACCAACAGAGCAAGG...CATTCCGTGGACATCAGCACTACTCTCCTGAGGACTCTTCAGTGGCTGAGCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376979.4 |
||
| CDS-3UTR CCA 90 bp | AAGTCCAAAGCTGCTCAGCCACTGAAGAGTCCTCAGGAGAGTAGTGCTGATGTCGTGGGTTTCACTCAGTaGAATCCCTCCAAGCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KSKAAQPLKSPQESSADVVGFTQ*NPSKQV Trigger: GACCTGCTTGGAGGGATTCCACTGAGTGAAACCCAC...GACATCAGCACTACTCTCCTGAGGACTCTTCAGTGGCTGAGCAGCTTTGGACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376979.4 |
||
| CDS-3UTR CCA 90 bp | AAGTCCAAAGCTGCTCAGCCACTGAAGAGTCCTCAGGAGAGTAGTGCTGATGTCGATGTCCACGGAATGTaGGAGCAGCACATGGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: KSKAAQPLKSPQESSADVDVHGM*EQHMDK Trigger: CTTGTCCATGTGCTGCTCCCACATTCCGTGGACATC...GACATCAGCACTACTCTCCTGAGGACTCTTCAGTGGCTGAGCAGCTTTGGACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376979.4 |
||
| CDS-3UTR TCA 90 bp | ACAAACAAGTCCAAAGCTGCTCAGCCACTGAAGAGTCCTCAGGAGAGTAGTGCTACATGGACAAGCCTGTaGGTGGGTTTCACTCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TNKSKAAQPLKSPQESSATWTSL*VGFTQW Trigger: CCACTGAGTGAAACCCACTCACAGGCTTGTCCATGT...AGCACTACTCTCCTGAGGACTCTTCAGTGGCTGAGCAGCTTTGGACTTGTTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376979.4 |
||
| CDS-3UTR CCA 90 bp | AGTCCTCAGGAGAGTAGTGCTGATGTCCACGGAATGTGGGAGCAGCACATGGACTGTTGGTTGAATGTGTaGACAGCAAACTCCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SPQESSADVHGMWEQHMDCWLNV*TANSTV Trigger: CACAGTGGAGTTTGCTGTCCACACATTCAACCAACA...GTCCATGTGCTGCTCCCACATTCCGTGGACATCAGCACTACTCTCCTGAGGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376979.4 |
||
| CDS-3UTR GCA 90 bp | ACAAACAAGTCCAAAGCTGCTCAGCCACTGAAGAGTCCTCAGGAGAGTAGTGCTGTCTTGGACTCCACCTaGTCCTTCCAGGAATTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TNKSKAAQPLKSPQESSAVLDST*SFQEFK Trigger: CTTGAATTCCTGGAAGGAGCAGGTGGAGTCCAAGAC...AGCACTACTCTCCTGAGGACTCTTCAGTGGCTGAGCAGCTTTGGACTTGTTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376979.4 |
||
| CDS-3UTR GCA 90 bp | ACAAACAAGTCCAAAGCTGCTCAGCCACTGAAGAGTCCTCAGGAGAGTAGTGCTAAACAAGTCCAAAGCTaGTCAGCCACTGAAGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TNKSKAAQPLKSPQESSAKQVQS*SATEES Trigger: GGACTCTTCAGTGGCTGAGCAGCTTTGGACTTGTTT...AGCACTACTCTCCTGAGGACTCTTCAGTGGCTGAGCAGCTTTGGACTTGTTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376979.4 |
||
| CDS-3UTR TCA 90 bp | AAGTCCAAAGCTGCTCAGCCACTGAAGAGTCCTCAGGAGAGTAGTGCTGATGTCATGATCTACACTACATaGTTAGGCTCAAGATGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KSKAAQPLKSPQESSADVMIYTT*LGSRCV Trigger: CACACATCTTGAGCCTAATCATGTAGTGTAGATCAT...GACATCAGCACTACTCTCCTGAGGACTCTTCAGTGGCTGAGCAGCTTTGGACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376979.4 |
||
| CDS-3UTR CCA 90 bp | ATAACAAACAAGTCCAAAGCTGCTCAGCCACTGAAGAGTCCTCAGGAGAGTAGTTTGAGAATACAGTCTTaGACTCCACCTGCTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ITNKSKAAQPLKSPQESSLRIQS*TPPAPS Trigger: GGAAGGAGCAGGTGGAGTCCAAGACTGTATTCTCAA...ACTACTCTCCTGAGGACTCTTCAGTGGCTGAGCAGCTTTGGACTTGTTTGTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376979.4 |
||
| CDS-3UTR TCA 90 bp | ATAACAAACAAGTCCAAAGCTGCTCAGCCACTGAAGAGTCCTCAGGAGAGTAGTTCTAAAACACTGATCTaGGATCTCAAACACATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ITNKSKAAQPLKSPQESSSKTLI*DLKHMQ Trigger: TTGCATGTGTTTGAGATCTCAGATCAGTGTTTTAGA...ACTACTCTCCTGAGGACTCTTCAGTGGCTGAGCAGCTTTGGACTTGTTTGTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376979.4 |
||
| CDS TCA 90 bp | ATGTGTGGACAGCAAACTCCACTGTGGCAGGGAGGTAACGAGCCATaGCATTGTGTTCATCACAGTCCCTTTGCTCGTGGAAATGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: MCGQQTPLWQGGNEP*HCVHHSPFARGNAR Trigger: CCTGGCATTTCCACGAGCAAAGGGACTGTGATGAACACAATGTCATGGCTCGTTACCTCCCTGCCACAGTGGAGTTTGCTGTCCACACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376979.4 |
||
| CDS-3UTR CAA 90 bp | ACAAACAAGTCCAAAGCTGCTCAGCCACTGAAGAGTCCTCAGGAGAGTAGTGCTTTCATCACAGTCCCTTaGCTCGTGGAAATGCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: TNKSKAAQPLKSPQESSAFITVP*LVEMPG Trigger: GCCTGGCATTTCCACGAGCAAAGGGACTGTGATGAA...AGCACTACTCTCCTGAGGACTCTTCAGTGGCTGAGCAGCTTTGGACTTGTTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376979.4 |
||
| CDS-3UTR CAA 90 bp | AAGTCCAAAGCTGCTCAGCCACTGAAGAGTCCTCAGGAGAGTAGTGCTGATGTCTCTTGGAAATGGCAGTaGTCAATGTCGTCTTCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: KSKAAQPLKSPQESSADVSWKWQ*SMSSSN Trigger: ATTTGAAGACGACATTGACAACTGCCATTTCCAAGA...GACATCAGCACTACTCTCCTGAGGACTCTTCAGTGGCTGAGCAGCTTTGGACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376979.4 |
||
| CDS-3UTR CAA 90 bp | ACAAACAAGTCCAAAGCTGCTCAGCCACTGAAGAGTCCTCAGGAGAGTAGTGCTAAGCAGGTGAAAGTATaGTTCAGCTCTGTGCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: TNKSKAAQPLKSPQESSAKQVKV*FSSVLS Trigger: AGAAAGCACAGAGCTGAACAATACTTTCACCTGCTT...AGCACTACTCTCCTGAGGACTCTTCAGTGGCTGAGCAGCTTTGGACTTGTTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376979.4 |
||
| CDS CCA 72 bp | CGGAATGTGGGAGCAGCACATGGACAAGCCTGTGAGTaGGTTTCACTCAGTGGAATCCCTCCAAGCAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: RNVGAAHGQACE*VSLSGIPPSRS Trigger: AGACCTGCTTGGAGGGATTCCACTGAGTGAAACCCACTCACAGGCTTGTCCATGTGCTGCTCCCACATTCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376979.4 |
||
| CDS TCA 72 bp | CAGCAAACTCCACTGTGGCAGGGAGGTAACGAGCCATaGCATTGTGTTCATCACAGTCCCTTTGCTCGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: QQTPLWQGGNEP*HCVHHSPFARG Trigger: TCCACGAGCAAAGGGACTGTGATGAACACAATGTCATGGCTCGTTACCTCCCTGCCACAGTGGAGTTTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376979.4 |
||