Pregenerated sensors for CST9 (Homo sapiens)
Ensembl gene IDs: ENSG00000173335Ensembl transcript IDs: ENST00000376971.4
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GAAGAGACAGTAGGGCGGGGTTTGGGGAGGTTCGGGAATCTTGTGGCATCTGCCGCCATGTGGCCCAGGTaGAGGCAGCTGCAATGGTGT | + |
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Preference number: 2 (lower is better) Translates to: EETVGRGLGRFGNLVASAAMWPR*RQLQWC Trigger: ACACCATTGCAGCTGCCTGCACCTGGGCCACATGGC...GGCAGATGCCACAAGATTCCCGAACCTCCCCAAACCCCGCCCTACTGTCTCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| 3UTR-3UTR GCA 90 bp | CCTGAGCCTGAGGCCAATCCTGAACTACAACGTGATTTGAGGCTCCCTCCCTCCAGCCAGGGTCACTTGTaGCATGCCTCCTCCTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: PEPEANPELQRDLRLPPSSQGHL*HASSSS Trigger: GCTGGAGGAGGAGGCATGGCACAAGTGACCCTGGCT...GGAGGGAGGGAGCCTCAAATCACGTTGTAGTTCAGGATTGGCCTCAGGCTCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| 3UTR-3UTR GCA 90 bp | GAAGGTCCGAGGGAACAAACAGGAAGAGACAGTAGGGCGGGGTTTGGGGAGGTTTGGGGCCAGCAATTGTaGCACGTGGCTCTGGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: EGPREQTGRDSRAGFGEVWGQQL*HVALAF Trigger: GAAGGCCAGAGCCACGTGGCACAATTGCTGGCCCCA...AACCTCCCCAAACCCCGCCCTACTGTCTCTTCCTGTTTGTTCCCTCGGACCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| 3UTR-3UTR CCA 90 bp | ACAGTAGGGCGGGGTTTGGGGAGGTTCGGGAATCTTGTGGCATCTGCCCTCAACGAGCCAGGCTTTGCTTaGAGCTCGTCCCCTAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: TVGRGLGRFGNLVASALNEPGFA*SSSPRA Trigger: TGCTCTAGGGGACGAGCTCCAAGCAAAGCCTGGCTC...GTTGAGGGCAGATGCCACAAGATTCCCGAACCTCCCCAAACCCCGCCCTACTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| 3UTR-3UTR CCA 90 bp | CCTGAGCCTGAGGCCAATCCTGAACTACAACGTGATTTGAGGCTCCCTCCCTCCTGCAGGCAGCTGCAATaGTGTCAGAGGGCAGAATCA | + |
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Preference number: 2 (lower is better) Translates to: PEPEANPELQRDLRLPPSCRQLQ*CQRAES Trigger: TGATTCTGCCCTCTGACACCATTGCAGCTGCCTGCA...GGAGGGAGGGAGCCTCAAATCACGTTGTAGTTCAGGATTGGCCTCAGGCTCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| 3UTR-3UTR CCA 90 bp | GTTCAGGAGTTCAAAATATGTCTTCCAGGGCATGGTTTCAACAGTGAAGAAGCAAGCAATTGTGCCACGTaGCTCTGGCCTTCAGGTCTA | + |
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Preference number: 2 (lower is better) Translates to: VQEFKICLPGHGFNSEEASNCAT*LWPSGL Trigger: TAGACCTGAAGGCCAGAGCCACGTGGCACAATTGCT...TGCTTCTTCACTGTTGAAACCATGCCCTGGAAGACATATTTTGAACTCCTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| 3UTR-3UTR TCA 90 bp | TTCTACTTGAGGAACCTGGACAGTGAGGATTTTCTAAAATGCCAAGTCATAAAAGAGCTGCTCAGCCACTaGTATGTCAACTCCTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: FYLRNLDSEDFLKCQVIKELLSH*YVNSWE Trigger: TTCCCAGGAGTTGACATATCAGTGGCTGAGCAGCTC...TTTTATGACTTGGCATTTTAGAAAATCCTCACTGTCCAGGTTCCTCAAGTAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| 3UTR-3UTR CAA 90 bp | ACAGTAGGGCGGGGTTTGGGGAGGTTCGGGAATCTTGTGGCATCTGCCCTCAACTCCTGGGGCCAGCAATaGTGCCACGTGGCTCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: TVGRGLGRFGNLVASALNSWGQQ*CHVALA Trigger: GGCCAGAGCCACGTGGCACAATTGCTGGCCCCAGGA...GTTGAGGGCAGATGCCACAAGATTCCCGAACCTCCCCAAACCCCGCCCTACTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| 3UTR-3UTR CAA 90 bp | TTGCCCATTCCTGGGGCCAGCAATTGTGCCACGTGGCTCTGGCCTTCAGGTCTACAGCCTCCACCACTTTaGGGTCTAGGGCAGGGTAGG | + |
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Preference number: 3 (lower is better) Translates to: LPIPGASNCATWLWPSGLQPPPL*GLGQGR Trigger: CCTACCCTGCCCTAGACCCAAAAGTGGTGGAGGCTG...TAGACCTGAAGGCCAGAGCCACGTGGCACAATTGCTGGCCCCAGGAATGGGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| 3UTR-3UTR CAA 90 bp | ACAGGAAGAGACAGTAGGGCGGGGTTTGGGGAGGTTCGGGAATCTTGTGGCATCCTTAGCCAGGGTCACTaGTGCCATGCCTCCTCCTCC | + |
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Preference number: 3 (lower is better) Translates to: TGRDSRAGFGEVRESCGILSQGH*CHASSS Trigger: GGAGGAGGAGGCATGGCACAAGTGACCCTGGCTAAG...GATGCCACAAGATTCCCGAACCTCCCCAAACCCCGCCCTACTGTCTCTTCCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| 3UTR TCA 72 bp | ATAAGAGAACAAATATGCACGGAGCTGCTCAGCCACTaGTATGTCAACTCCTGGGAACAGCTGGTGTCCACG | + |
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Preference number: 3 (lower is better) Translates to: IREQICTELLSH*YVNSWEQLVST Trigger: CGTGGACACCAGCTGTTCCCAGGAGTTGACATATCAGTGGCTGAGCAGCTCCGTGCATATTTGTTCTCTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| 3UTR-3UTR CAA 90 bp | GTTCAGGAGTTCAAAATATGTCTTCCAGGGCATGGTTTCAACAGTGAAGAAGCACTTACAATAAGGGGGTaGACTAAGAATGGGAAGTTT | + |
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Preference number: 3 (lower is better) Translates to: VQEFKICLPGHGFNSEEALTIRG*TKNGKF Trigger: AAACTTCCCATTCTTAGTCAACCCCCTTATTGTAAG...TGCTTCTTCACTGTTGAAACCATGCCCTGGAAGACATATTTTGAACTCCTGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| CDS-3UTR TCA 90 bp | CAACGTGATTTGAGGCTCCCTCCCTCCTTAGCCAGGGTCACTTGTGCCATGCCTTCTGCGGACTCGACATaGTGCAGGCTCCAGCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: QRDLRLPPSLARVTCAMPSADST*CRLQQP Trigger: GGGCTGCTGGAGCCTGCATCATGTCGAGTCCGCAGA...AGGCATGGCACAAGTGACCCTGGCTAAGGAGGGAGGGAGCCTCAAATCACGTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| CDS-3UTR TCA 90 bp | GAAGAGACAGTAGGGCGGGGTTTGGGGAGGTTCGGGAATCTTGTGGCATCTGCCGCCCATGAGAAGCAGTaGCAGTGCCCAGGGCATAGC | + |
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Preference number: 4 (lower is better) Translates to: EETVGRGLGRFGNLVASAAHEKQ*QCPGHS Trigger: GCTATGCCCTGGGCACTGTCACTGCTTCTCATGGGC...GGCAGATGCCACAAGATTCCCGAACCTCCCCAAACCCCGCCCTACTGTCTCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| CDS-3UTR GCA 90 bp | ACAGGAAGAGACAGTAGGGCGGGGTTTGGGGAGGTTCGGGAATCTTGTGGCATCGGGTCACTTGTGCCATaGCTCCTCCTCCAGCCCGTG | + |
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Preference number: 4 (lower is better) Translates to: TGRDSRAGFGEVRESCGIGSLVP*LLLQPV Trigger: CACGGGCTGGAGGAGGAGGCATGGCACAAGTGACCC...GATGCCACAAGATTCCCGAACCTCCCCAAACCCCGCCCTACTGTCTCTTCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| CDS-3UTR GCA 90 bp | CGTGATTTGAGGCTCCCTCCCTCCTTAGCCAGGGTCACTTGTGCCATGCCTCCTAGCCAGGGTCACTTGTaGCATGCCTCCTCCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: RDLRLPPSLARVTCAMPPSQGHL*HASSSS Trigger: GCTGGAGGAGGAGGCATGGCACAAGTGACCCTGGCT...AGGAGGCATGGCACAAGTGACCCTGGCTAAGGAGGGAGGGAGCCTCAAATCACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| CDS-3UTR GCA 90 bp | ACAGTAGGGCGGGGTTTGGGGAGGTTCGGGAATCTTGTGGCATCTGCCCTCAACTGGGGCCAGCAATTGTaGCACGTGGCTCTGGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: TVGRGLGRFGNLVASALNWGQQL*HVALAF Trigger: GAAGGCCAGAGCCACGTGGCACAATTGCTGGCCCCA...GTTGAGGGCAGATGCCACAAGATTCCCGAACCTCCCCAAACCCCGCCCTACTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| CDS-3UTR TCA 90 bp | TTGCCCATTCCTGGGGCCAGCAATTGTGCCACGTGGCTCTGGCCTTCAGGTCTAGCTATCCTCCCTCCATaGACTCAGGACGCGCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: LPIPGASNCATWLWPSGLAILPP*TQDAQQ Trigger: CTGTTGCGCGTCCTGAGTTCATGGAGGGAGGATAGC...TAGACCTGAAGGCCAGAGCCACGTGGCACAATTGCTGGCCCCAGGAATGGGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| CDS-3UTR GCA 90 bp | ACAGTAGGGCGGGGTTTGGGGAGGTTCGGGAATCTTGTGGCATCTGCCCTCAACCAGCCTGGTACAGCCTaGTGTGGGCTCACTTCCCTT | + |
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Preference number: 4 (lower is better) Translates to: TVGRGLGRFGNLVASALNQPGTA*CGLTSL Trigger: AAGGGAAGTGAGCCCACAGCAGGCTGTACCAGGCTG...GTTGAGGGCAGATGCCACAAGATTCCCGAACCTCCCCAAACCCCGCCCTACTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| CDS-3UTR GCA 90 bp | ACAGGAAGAGACAGTAGGGCGGGGTTTGGGGAGGTTCGGGAATCTTGTGGCATCGCCATGTGGCCCAGGTaGAGGCAGCTGCAATGGTGT | + |
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Preference number: 4 (lower is better) Translates to: TGRDSRAGFGEVRESCGIAMWPR*RQLQWC Trigger: ACACCATTGCAGCTGCCTGCACCTGGGCCACATGGC...GATGCCACAAGATTCCCGAACCTCCCCAAACCCCGCCCTACTGTCTCTTCCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| CDS-3UTR CCA 90 bp | GAAGAGACAGTAGGGCGGGGTTTGGGGAGGTTCGGGAATCTTGTGGCATCTGCCCACCTTGCCCATTCCTaGGGCCAGCAATTGTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: EETVGRGLGRFGNLVASAHLAHS*GQQLCH Trigger: GTGGCACAATTGCTGGCCCCAGGAATGGGCAAGGTG...GGCAGATGCCACAAGATTCCCGAACCTCCCCAAACCCCGCCCTACTGTCTCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| CDS-3UTR CCA 90 bp | CGTGATTTGAGGCTCCCTCCCTCCTTAGCCAGGGTCACTTGTGCCATGCCTCCTTGGTACAGCCTGCTGTaGGCTCACTTCCCTTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RDLRLPPSLARVTCAMPPWYSLL*AHFPLS Trigger: GGACAAAGGGAAGTGAGCCCACAGCAGGCTGTACCA...AGGAGGCATGGCACAAGTGACCCTGGCTAAGGAGGGAGGGAGCCTCAAATCACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| CDS-3UTR TCA 90 bp | ACAGTAGGGCGGGGTTTGGGGAGGTTCGGGAATCTTGTGGCATCTGCCCTCAACGAGCTGCTCAGCCACTaGTATGTCAACTCCTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: TVGRGLGRFGNLVASALNELLSH*YVNSWE Trigger: TTCCCAGGAGTTGACATATCAGTGGCTGAGCAGCTC...GTTGAGGGCAGATGCCACAAGATTCCCGAACCTCCCCAAACCCCGCCCTACTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| CDS-3UTR CCA 90 bp | GAAGAGACAGTAGGGCGGGGTTTGGGGAGGTTCGGGAATCTTGTGGCATCTGCCGGTTCGGGAATCTTGTaGCATCTGCCCTCAACACAG | + |
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Preference number: 4 (lower is better) Translates to: EETVGRGLGRFGNLVASAGSGIL*HLPSTQ Trigger: CTGTGTTGAGGGCAGATGCCACAAGATTCCCGAACC...GGCAGATGCCACAAGATTCCCGAACCTCCCCAAACCCCGCCCTACTGTCTCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| CDS-3UTR CCA 90 bp | CAACGTGATTTGAGGCTCCCTCCCTCCTTAGCCAGGGTCACTTGTGCCATGCCTCTTTGTCCCTCGGAATaGCTTTGTCAGCTGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: QRDLRLPPSLARVTCAMPLCPSE*LCQLLL Trigger: CAGGAGCAGCTGACAAAGCCATTCCGAGGGACAAAG...AGGCATGGCACAAGTGACCCTGGCTAAGGAGGGAGGGAGCCTCAAATCACGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| 3UTR CAA 72 bp | CCTGAGCCTGAGGCCAATCCTGAACTACAACGTGATTaGAGGCTCCCTCCCTCCTTAGCCAGGGTCACTTGT | + |
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Preference number: 4 (lower is better) Translates to: PEPEANPELQRD*RLPPSLARVTC Trigger: ACAAGTGACCCTGGCTAAGGAGGGAGGGAGCCTCAAATCACGTTGTAGTTCAGGATTGGCCTCAGGCTCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| CDS-3UTR TCA 90 bp | ACAGTAGGGCGGGGTTTGGGGAGGTTCGGGAATCTTGTGGCATCTGCCCTCAACCCTTGCTCTGCACGTTaGAAGTGTTCAAGGCAAACT | + |
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Preference number: 4 (lower is better) Translates to: TVGRGLGRFGNLVASALNPCSAR*KCSRQT Trigger: AGTTTGCCTTGAACACTTTCAACGTGCAGAGCAAGG...GTTGAGGGCAGATGCCACAAGATTCCCGAACCTCCCCAAACCCCGCCCTACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| CDS-3UTR TCA 90 bp | ACAGTAGGGCGGGGTTTGGGGAGGTTCGGGAATCTTGTGGCATCTGCCCTCAACATGACCTATTCTACTTaGGGAACCTGGACAGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: TVGRGLGRFGNLVASALNMTYST*GTWTVR Trigger: CCTCACTGTCCAGGTTCCTCAAGTAGAATAGGTCAT...GTTGAGGGCAGATGCCACAAGATTCCCGAACCTCCCCAAACCCCGCCCTACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| CDS-3UTR GCA 90 bp | CCTGAGCCTGAGGCCAATCCTGAACTACAACGTGATTTGAGGCTCCCTCCCTCCACGGTTTGGCGCAGTTaGAGATTCATGGAGAACACC | + |
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Preference number: 4 (lower is better) Translates to: PEPEANPELQRDLRLPPSTVWRS*RFMENT Trigger: GGTGTTCTCCATGAATCTGCAACTGCGCCAAACCGT...GGAGGGAGGGAGCCTCAAATCACGTTGTAGTTCAGGATTGGCCTCAGGCTCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| CDS-3UTR GCA 90 bp | ACAGGAAGAGACAGTAGGGCGGGGTTTGGGGAGGTTCGGGAATCTTGTGGCATCTGCTCCTCCTTGCTCTaGACGTTGAAAGTGTTCAAG | + |
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Preference number: 4 (lower is better) Translates to: TGRDSRAGFGEVRESCGICSSLL*TLKVFK Trigger: CTTGAACACTTTCAACGTGCAGAGCAAGGAGGAGCA...GATGCCACAAGATTCCCGAACCTCCCCAAACCCCGCCCTACTGTCTCTTCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| CDS-3UTR GCA 90 bp | ACAGTAGGGCGGGGTTTGGGGAGGTTCGGGAATCTTGTGGCATCTGCCCTCAACAAATATGCACGGAGCTaGTCAGCCACTGATATGTCA | + |
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Preference number: 4 (lower is better) Translates to: TVGRGLGRFGNLVASALNKYARS*SATDMS Trigger: TGACATATCAGTGGCTGAGCAGCTCCGTGCATATTT...GTTGAGGGCAGATGCCACAAGATTCCCGAACCTCCCCAAACCCCGCCCTACTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| CDS-3UTR GCA 90 bp | CGTGATTTGAGGCTCCCTCCCTCCTTAGCCAGGGTCACTTGTGCCATGCCTCCTATAAGAGAACAAATATaGACGGAGCTGCTCAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: RDLRLPPSLARVTCAMPPIREQI*TELLSH Trigger: GTGGCTGAGCAGCTCCGTGCATATTTGTTCTCTTAT...AGGAGGCATGGCACAAGTGACCCTGGCTAAGGAGGGAGGGAGCCTCAAATCACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| CDS-3UTR CCA 90 bp | AAAAGTACCCACAGACATTGTCACCATTGTCTCCAGGCTCTTTCTCTAGAAGGCGGCCAGGCATGTGAGTaGCTTCCACTCAGGAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: KSTHRHCHHCLQALSLEGGQACE*LPLRRA Trigger: GGCTCTCCTGAGTGGAAGCCACTCACATGCCTGGCC...GCCTTCTAGAGAAAGAGCCTGGAGACAATGGTGACAATGTCTGTGGGTACTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| CDS-3UTR TCA 90 bp | AAAAGTACCCACAGACATTGTCACCATTGTCTCCAGGCTCTTTCTCTAGAAGGCGGACCTGAGGAAAGCTaGTGCCCTGTCTTACGTTGT | + |
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Preference number: 4 (lower is better) Translates to: KSTHRHCHHCLQALSLEGGPEES*CPVLRC Trigger: ACAACGTAAGACAGGGCATCAGCTTTCCTCAGGTCC...GCCTTCTAGAGAAAGAGCCTGGAGACAATGGTGACAATGTCTGTGGGTACTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| CDS-3UTR CCA 90 bp | GTTCAGGAGTTCAAAATATGTCTTCCAGGGCATGGTTTCAACAGTGAAGAAGCAGAGCCAGGCTTTGCTTaGAGCTCGTCCCCTAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: VQEFKICLPGHGFNSEEAEPGFA*SSSPRA Trigger: TGCTCTAGGGGACGAGCTCCAAGCAAAGCCTGGCTC...TGCTTCTTCACTGTTGAAACCATGCCCTGGAAGACATATTTTGAACTCCTGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| CDS-3UTR CCA 90 bp | AAAAGTACCCACAGACATTGTCACCATTGTCTCCAGGCTCTTTCTCTAGAAGGCAGCAATTGTGCCACGTaGCTCTGGCCTTCAGGTCTA | + |
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Preference number: 4 (lower is better) Translates to: KSTHRHCHHCLQALSLEGSNCAT*LWPSGL Trigger: TAGACCTGAAGGCCAGAGCCACGTGGCACAATTGCT...GCCTTCTAGAGAAAGAGCCTGGAGACAATGGTGACAATGTCTGTGGGTACTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| CDS-3UTR GCA 90 bp | TTCTACTTGAGGAACCTGGACAGTGAGGATTTTCTAAAATGCCAAGTCATAAAAATAGCCTTCCTCCTCTaGGGACTCGACATGATGCAG | + |
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Preference number: 4 (lower is better) Translates to: FYLRNLDSEDFLKCQVIKIAFLL*GLDMMQ Trigger: CTGCATCATGTCGAGTCCGCAGAGGAGGAAGGCTAT...TTTTATGACTTGGCATTTTAGAAAATCCTCACTGTCCAGGTTCCTCAAGTAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| CDS GCA 90 bp | CCCATGAGAAGCAGTGACAGTGCCCAGGGCATAGCCTTCCTCCTCTaGGGACTCGACATGATGCAGGCTCCAGCAGCCCTTGCCTTTGCC | + |
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Preference number: 5 (lower is better) Translates to: PMRSSDSAQGIAFLL*GLDMMQAPAALAFA Trigger: GGCAAAGGCAAGGGCTGCTGGAGCCTGCATCATGTCGAGTCCGCAGAGGAGGAAGGCTATGCCCTGGGCACTGTCACTGCTTCTCATGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| CDS-3UTR CAA 90 bp | ACAGGAAGAGACAGTAGGGCGGGGTTTGGGGAGGTTCGGGAATCTTGTGGCATCCAGCAGCCCTTGCCTTaGCCCTTCAGATCCCTGGCG | + |
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Preference number: 5 (lower is better) Translates to: TGRDSRAGFGEVRESCGIQQPLP*PFRSLA Trigger: CGCCAGGGATCTGAAGGGCAAAGGCAAGGGCTGCTG...GATGCCACAAGATTCCCGAACCTCCCCAAACCCCGCCCTACTGTCTCTTCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| CDS-3UTR CAA 90 bp | ACAGTAGGGCGGGGTTTGGGGAGGTTCGGGAATCTTGTGGCATCTGCCCTCAACCTTAGCCAGGGTCACTaGTGCCATGCCTCCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: TVGRGLGRFGNLVASALNLSQGH*CHASSS Trigger: GGAGGAGGAGGCATGGCACAAGTGACCCTGGCTAAG...GTTGAGGGCAGATGCCACAAGATTCCCGAACCTCCCCAAACCCCGCCCTACTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| CDS-3UTR CAA 90 bp | ACAGTAGGGCGGGGTTTGGGGAGGTTCGGGAATCTTGTGGCATCTGCCCTCAACTGGGCTCACTTCCCTTaGTCCCTCGGAATGGCTTTG | + |
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Preference number: 5 (lower is better) Translates to: TVGRGLGRFGNLVASALNWAHFP*SLGMAL Trigger: CAAAGCCATTCCGAGGGACAAAGGGAAGTGAGCCCA...GTTGAGGGCAGATGCCACAAGATTCCCGAACCTCCCCAAACCCCGCCCTACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| CDS TCA 90 bp | CACCATCTTACCTCGCCACTTTCTGTCCATGCTATCCTCCCTCCATaGACTCAGGACGCGCAACAGCCTGTAGGCATGCTCCTCCTTGCT | + |
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Preference number: 5 (lower is better) Translates to: HHLTSPLSVHAILPP*TQDAQQPVGMLLLA Trigger: AGCAAGGAGGAGCATGCCTACAGGCTGTTGCGCGTCCTGAGTTCATGGAGGGAGGATAGCATGGACAGAAAGTGGCGAGGTAAGATGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| CDS-3UTR CAA 90 bp | AAAAGTACCCACAGACATTGTCACCATTGTCTCCAGGCTCTTTCTCTAGAAGGCCAGCCTCCACCACTTTaGGGTCTAGGGCAGGGTAGG | + |
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Preference number: 5 (lower is better) Translates to: KSTHRHCHHCLQALSLEGQPPPL*GLGQGR Trigger: CCTACCCTGCCCTAGACCCAAAAGTGGTGGAGGCTG...GCCTTCTAGAGAAAGAGCCTGGAGACAATGGTGACAATGTCTGTGGGTACTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| CDS-3UTR CAA 90 bp | CGTGATTTGAGGCTCCCTCCCTCCTTAGCCAGGGTCACTTGTGCCATGCCTCCTCTTACAATAAGGGGGTaGACTAAGAATGGGAAGTTT | + |
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Preference number: 5 (lower is better) Translates to: RDLRLPPSLARVTCAMPPLTIRG*TKNGKF Trigger: AAACTTCCCATTCTTAGTCAACCCCCTTATTGTAAG...AGGAGGCATGGCACAAGTGACCCTGGCTAAGGAGGGAGGGAGCCTCAAATCACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| CDS-3UTR CAA 90 bp | AAAAGTACCCACAGACATTGTCACCATTGTCTCCAGGCTCTTTCTCTAGAAGGCACAGTAGGGCGGGGTTaGGGGAGGTTCGGGAATCTT | + |
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Preference number: 5 (lower is better) Translates to: KSTHRHCHHCLQALSLEGTVGRG*GRFGNL Trigger: AAGATTCCCGAACCTCCCCAAACCCCGCCCTACTGT...GCCTTCTAGAGAAAGAGCCTGGAGACAATGGTGACAATGTCTGTGGGTACTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| CDS-3UTR CAA 90 bp | TTCTACTTGAGGAACCTGGACAGTGAGGATTTTCTAAAATGCCAAGTCATAAAAGGAGGTTCGGGAATCTaGTGGCATCTGCCCTCAACA | + |
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Preference number: 5 (lower is better) Translates to: FYLRNLDSEDFLKCQVIKGGSGI*WHLPST Trigger: TGTTGAGGGCAGATGCCACAAGATTCCCGAACCTCC...TTTTATGACTTGGCATTTTAGAAAATCCTCACTGTCCAGGTTCCTCAAGTAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| CDS CCA 90 bp | AAAGTGTTCAAGGCAAACTCCACTGTGGCGAGGAACATAGGATCCTaGACTATTTTATTATTACCACCCATTTCCTCTTCAGAACACCAG | + |
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Preference number: 5 (lower is better) Translates to: KVFKANSTVARNIGS*TILLLPPISSSEHQ Trigger: CTGGTGTTCTGAAGAGGAAATGGGTGGTAATAATAAAATAGTCCAGGATCCTATGTTCCTCGCCACAGTGGAGTTTGCCTTGAACACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| CDS-3UTR CAA 90 bp | TTCTACTTGAGGAACCTGGACAGTGAGGATTTTCTAAAATGCCAAGTCATAAAAGAACTACAACGTGATTaGAGGCTCCCTCCCTCCTTA | + |
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Preference number: 5 (lower is better) Translates to: FYLRNLDSEDFLKCQVIKELQRD*RLPPSL Trigger: TAAGGAGGGAGGGAGCCTCAAATCACGTTGTAGTTC...TTTTATGACTTGGCATTTTAGAAAATCCTCACTGTCCAGGTTCCTCAAGTAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| CDS GCA 72 bp | AGCAGTGACAGTGCCCAGGGCATAGCCTTCCTCCTCTaGGGACTCGACATGATGCAGGCTCCAGCAGCCCTT | + |
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Preference number: 6 (lower is better) Translates to: SSDSAQGIAFLL*GLDMMQAPAAL Trigger: AAGGGCTGCTGGAGCCTGCATCATGTCGAGTCCGCAGAGGAGGAAGGCTATGCCCTGGGCACTGTCACTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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| CDS CCA 72 bp | AAGGCAAACTCCACTGTGGCGAGGAACATAGGATCCTaGACTATTTTATTATTACCACCCATTTCCTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: KANSTVARNIGS*TILLLPPISSS Trigger: TGAAGAGGAAATGGGTGGTAATAATAAAATAGTCCAGGATCCTATGTTCCTCGCCACAGTGGAGTTTGCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000376971.4 |
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