Pregenerated sensors for CST6 (Homo sapiens)
Ensembl gene IDs: ENSG00000175315Ensembl transcript IDs: ENST00000312134.3
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAAGCAGCACTGGCCATTTATTGTGACAGATACGGCCCACGGACCTaGAGTGCCCTCCACCATGGCCCCAAACCCAATGGCCTTCGCCCT | + |
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Preference number: 1 (lower is better) Translates to: EAALAIYCDRYGPRT*SALHHGPKPNGLRP Trigger: AGGGCGAAGGCCATTGGGTTTGGGGCCATGGTGGAGGGCACTTCAGGTCCGTGGGCCGTATCTGTCACAATAAATGGCCAGTGCTGCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| 3UTR TCA 72 bp | CTGGCCATTTATTGTGACAGATACGGCCCACGGACCTaGAGTGCCCTCCACCATGGCCCCAAACCCAATGGC | + |
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Preference number: 3 (lower is better) Translates to: LAIYCDRYGPRT*SALHHGPKPNG Trigger: GCCATTGGGTTTGGGGCCATGGTGGAGGGCACTTCAGGTCCGTGGGCCGTATCTGTCACAATAAATGGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS-3UTR CCA 90 bp | CCTGAAGTGCCCTCCACCATGGCCCCAAACCCAATGGCCTTCGCCCTCGGGGACGGCCCGGGCGTCGCGTaGCAGCGCCAGGAGGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: PEVPSTMAPNPMAFALGDGPGVA*QRQEAE Trigger: TTCTGCCTCCTGGCGCTGCCACGCGACGCCCGGGCC...GTCCCCGAGGGCGAAGGCCATTGGGTTTGGGGCCATGGTGGAGGGCACTTCAGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS-3UTR GCA 90 bp | CCTGAAGTGCCCTCCACCATGGCCCCAAACCCAATGGCCTTCGCCCTCGGGGACGGAGTTCTCCGACCATaGGCTCCTGCGGCCGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: PEVPSTMAPNPMAFALGDGVLRP*APAAGP Trigger: GGGCCCGGCCGCAGGAGCGCATGGTCGGAGAACTCC...GTCCCCGAGGGCGAAGGCCATTGGGTTTGGGGCCATGGTGGAGGGCACTTCAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS-3UTR GCA 90 bp | CCTGAAGTGCCCTCCACCATGGCCCCAAACCCAATGGCCTTCGCCCTCGGGGACGCCGCCTTCTGCACCTaGGGGTCGTCGGGCGACAGG | + |
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Preference number: 4 (lower is better) Translates to: PEVPSTMAPNPMAFALGDAAFCT*GSSGDR Trigger: CCTGTCGCCCGACGACCCGCAGGTGCAGAAGGCGGC...GTCCCCGAGGGCGAAGGCCATTGGGTTTGGGGCCATGGTGGAGGGCACTTCAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS-3UTR GCA 90 bp | CCTGAAGTGCCCTCCACCATGGCCCCAAACCCAATGGCCTTCGCCCTCGGGGACCGCCATGGCCGTCAGTaGCGTCGGAGCCCTCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: PEVPSTMAPNPMAFALGDRHGRQ*RRSPQS Trigger: GCTCTGAGGGCTCCGACGGCACTGACGGCCATGGCG...GTCCCCGAGGGCGAAGGCCATTGGGTTTGGGGCCATGGTGGAGGGCACTTCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS-3UTR CCA 90 bp | CCTGAAGTGCCCTCCACCATGGCCCCAAACCCAATGGCCTTCGCCCTCGGGGACTGCCCATGTTGTAGCTaGCCACGGCCGCCTGCGCCG | + |
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Preference number: 4 (lower is better) Translates to: PEVPSTMAPNPMAFALGDCPCCS*PRPPAP Trigger: CGGCGCAGGCGGCCGTGGCCAGCTACAACATGGGCA...GTCCCCGAGGGCGAAGGCCATTGGGTTTGGGGCCATGGTGGAGGGCACTTCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS-3UTR TCA 90 bp | CCTGAAGTGCCCTCCACCATGGCCCCAAACCCAATGGCCTTCGCCCTCGGGGACTACGGCCCACGGACCTaGAGTGCCCTCCACCATGGC | + |
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Preference number: 4 (lower is better) Translates to: PEVPSTMAPNPMAFALGDYGPRT*SALHHG Trigger: GCCATGGTGGAGGGCACTTCAGGTCCGTGGGCCGTA...GTCCCCGAGGGCGAAGGCCATTGGGTTTGGGGCCATGGTGGAGGGCACTTCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS-3UTR TCA 90 bp | CTGAAGTGCCCTCCACCATGGCCCCAAACCCAATGGCCTTCGCCCTCGGGGACTCCAGGGGGCAAGTGGTaGGGTCGACGTGGTCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: LKCPPPWPQTQWPSPSGTPGGKW*GRRGLQ Trigger: CTGGAGACCACGTCGACCTCACCACTTGCCCCCTGG...AGTCCCCGAGGGCGAAGGCCATTGGGTTTGGGGCCATGGTGGAGGGCACTTCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS-3UTR GCA 90 bp | CACTGGCCATTTATTGTGACAGATACGGCCCACGGACCTGAAGTGCCCTCCACCCTGGCCACGGCCGCCTaGGCCGCCTTCTGCACCTGC | + |
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Preference number: 4 (lower is better) Translates to: HWPFIVTDTAHGPEVPSTLATAA*AAFCTC Trigger: GCAGGTGCAGAAGGCGGCGCAGGCGGCCGTGGCCAG...GGTGGAGGGCACTTCAGGTCCGTGGGCCGTATCTGTCACAATAAATGGCCAGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS-3UTR CCA 90 bp | CTGAAGTGCCCTCCACCATGGCCCCAAACCCAATGGCCTTCGCCCTCGGGGACTTGGCCCCAAACCCAATaGCCTTCGCCCTCGGGGACT | + |
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Preference number: 4 (lower is better) Translates to: LKCPPPWPQTQWPSPSGTWPQTQ*PSPSGT Trigger: AGTCCCCGAGGGCGAAGGCCATTGGGTTTGGGGCCA...AGTCCCCGAGGGCGAAGGCCATTGGGTTTGGGGCCATGGTGGAGGGCACTTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS-3UTR GCA 90 bp | CACTGGCCATTTATTGTGACAGATACGGCCCACGGACCTGAAGTGCCCTCCACCCGCAGCTTCTCCTGCTaGGCCCCTGCTGCCAGGGGG | + |
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Preference number: 4 (lower is better) Translates to: HWPFIVTDTAHGPEVPSTRSFSC*APAARG Trigger: CCCCCTGGCAGCAGGGGCGCAGCAGGAGAAGCTGCG...GGTGGAGGGCACTTCAGGTCCGTGGGCCGTATCTGTCACAATAAATGGCCAGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS-3UTR CCA 90 bp | CTGAAGTGCCCTCCACCATGGCCCCAAACCCAATGGCCTTCGCCCTCGGGGACTATGCCGGCCACCAGCTaGCTCTGCGCCTTGATGATG | + |
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Preference number: 4 (lower is better) Translates to: LKCPPPWPQTQWPSPSGTMPATS*LCALMM Trigger: CATCATCAAGGCGCAGAGCCAGCTGGTGGCCGGCAT...AGTCCCCGAGGGCGAAGGCCATTGGGTTTGGGGCCATGGTGGAGGGCACTTCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS-3UTR CCA 90 bp | CCTGAAGTGCCCTCCACCATGGCCCCAAACCCAATGGCCTTCGCCCTCGGGGACAAGTGCCCTCCACCATaGCCCCAAACCCAATGGCCT | + |
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Preference number: 4 (lower is better) Translates to: PEVPSTMAPNPMAFALGDKCPPP*PQTQWP Trigger: AGGCCATTGGGTTTGGGGCCATGGTGGAGGGCACTT...GTCCCCGAGGGCGAAGGCCATTGGGTTTGGGGCCATGGTGGAGGGCACTTCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS-3UTR GCA 90 bp | CCATTTATTGTGACAGATACGGCCCACGGACCTGAAGTGCCCTCCACCATGGCCCTGCTGCGCCCCTGCTaGCAGGGGGCAAGTGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: PFIVTDTAHGPEVPSTMALLRPC*QGASGE Trigger: CTCACCACTTGCCCCCTGGCAGCAGGGGCGCAGCAG...GGCCATGGTGGAGGGCACTTCAGGTCCGTGGGCCGTATCTGTCACAATAAATGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS-3UTR GCA 90 bp | CACTGGCCATTTATTGTGACAGATACGGCCCACGGACCTGAAGTGCCCTCCACCCTCCTGCTGCGCCCCTaGTGCCAGGGGGCAAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: HWPFIVTDTAHGPEVPSTLLLRP*CQGASG Trigger: ACCACTTGCCCCCTGGCAGCAGGGGCGCAGCAGGAG...GGTGGAGGGCACTTCAGGTCCGTGGGCCGTATCTGTCACAATAAATGGCCAGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS-3UTR GCA 90 bp | CACTGGCCATTTATTGTGACAGATACGGCCCACGGACCTGAAGTGCCCTCCACCCAGCGCAGCTTCTCCTaGTGCGCCCCTGCTGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: HWPFIVTDTAHGPEVPSTQRSFS*CAPAAR Trigger: CCTGGCAGCAGGGGCGCAGCAGGAGAAGCTGCGCTG...GGTGGAGGGCACTTCAGGTCCGTGGGCCGTATCTGTCACAATAAATGGCCAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS-3UTR TCA 90 bp | CCTGAAGTGCCCTCCACCATGGCCCCAAACCCAATGGCCTTCGCCCTCGGGGACTTGTGCTTTAGGAGCTaGGAGGAGTTCTGCCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: PEVPSTMAPNPMAFALGDLCFRS*EEFCQG Trigger: TCCCTGGCAGAACTCCTCTCAGCTCCTAAAGCACAA...GTCCCCGAGGGCGAAGGCCATTGGGTTTGGGGCCATGGTGGAGGGCACTTCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS-3UTR CCA 90 bp | CCATTTATTGTGACAGATACGGCCCACGGACCTGAAGTGCCCTCCACCATGGCCGGTTCGAACGCGCCATaGCCGTCAGTGCCGTCGGAG | + |
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Preference number: 4 (lower is better) Translates to: PFIVTDTAHGPEVPSTMAGSNAP*PSVPSE Trigger: CTCCGACGGCACTGACGGCCATGGCGCGTTCGAACC...GGCCATGGTGGAGGGCACTTCAGGTCCGTGGGCCGTATCTGTCACAATAAATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS-3UTR TCA 90 bp | CACTGGCCATTTATTGTGACAGATACGGCCCACGGACCTGAAGTGCCCTCCACCCGACGTGGTCTCCAGTaGCCCTGGTCTTGCGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: HWPFIVTDTAHGPEVPSTRRGLQ*PWSCGS Trigger: ACTGCCGCAAGACCAGGGTCACTGGAGACCACGTCG...GGTGGAGGGCACTTCAGGTCCGTGGGCCGTATCTGTCACAATAAATGGCCAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS-3UTR GCA 90 bp | CCATTTATTGTGACAGATACGGCCCACGGACCTGAAGTGCCCTCCACCATGGCCCCCACGGACCTGAAGTaGCCTCCACCATGGCCCCAA | + |
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Preference number: 4 (lower is better) Translates to: PFIVTDTAHGPEVPSTMAPTDLK*PPPWPQ Trigger: TTGGGGCCATGGTGGAGGGCACTTCAGGTCCGTGGG...GGCCATGGTGGAGGGCACTTCAGGTCCGTGGGCCGTATCTGTCACAATAAATGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS-3UTR TCA 90 bp | CACTGGCCATTTATTGTGACAGATACGGCCCACGGACCTGAAGTGCCCTCCACCTCGTCAGGAAGTACTTaGTGCCGGCCACCAGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: HWPFIVTDTAHGPEVPSTSSGST*CRPPAG Trigger: GCCAGCTGGTGGCCGGCATCAAGTACTTCCTGACGA...GGTGGAGGGCACTTCAGGTCCGTGGGCCGTATCTGTCACAATAAATGGCCAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS-3UTR GCA 90 bp | CCATTTATTGTGACAGATACGGCCCACGGACCTGAAGTGCCCTCCACCATGGCCGCCACCAGCTGGCTCTaGGCCTTGATGATGTGCGTG | + |
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Preference number: 4 (lower is better) Translates to: PFIVTDTAHGPEVPSTMAATSWL*ALMMCV Trigger: CACGCACATCATCAAGGCGCAGAGCCAGCTGGTGGC...GGCCATGGTGGAGGGCACTTCAGGTCCGTGGGCCGTATCTGTCACAATAAATGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS-3UTR CCA 90 bp | CCATTTATTGTGACAGATACGGCCCACGGACCTGAAGTGCCCTCCACCATGGCCGTGGTGAGGTCGACGTaGTCTCCAGTGACCCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: PFIVTDTAHGPEVPSTMAVVRST*SPVTLV Trigger: GACCAGGGTCACTGGAGACCACGTCGACCTCACCAC...GGCCATGGTGGAGGGCACTTCAGGTCCGTGGGCCGTATCTGTCACAATAAATGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS-3UTR GCA 90 bp | CTGAAGTGCCCTCCACCATGGCCCCAAACCCAATGGCCTTCGCCCTCGGGGACTAGTAGTAGATGCTGTTaGTGCCCATGTTGTAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: LKCPPPWPQTQWPSPSGTSSRCC*CPCCSW Trigger: CCAGCTACAACATGGGCAGCAACAGCATCTACTACT...AGTCCCCGAGGGCGAAGGCCATTGGGTTTGGGGCCATGGTGGAGGGCACTTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS-3UTR GCA 90 bp | CTGAAGTGCCCTCCACCATGGCCCCAAACCCAATGGCCTTCGCCCTCGGGGACTCTCGGAAGTAGTAGATaGTGTTGCTGCCCATGTTGT | + |
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Preference number: 4 (lower is better) Translates to: LKCPPPWPQTQWPSPSGTLGSSR*CCCPCC Trigger: ACAACATGGGCAGCAACAGCATCTACTACTTCCGAG...AGTCCCCGAGGGCGAAGGCCATTGGGTTTGGGGCCATGGTGGAGGGCACTTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS-3UTR GCA 90 bp | CCTGAAGTGCCCTCCACCATGGCCCCAAACCCAATGGCCTTCGCCCTCGGGGACGGGACTTATCACATCTaGACACAGTTGTGCTTTAGG | + |
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Preference number: 4 (lower is better) Translates to: PEVPSTMAPNPMAFALGDGTYHI*TQLCFR Trigger: CCTAAAGCACAACTGTGTGCAGATGTGATAAGTCCC...GTCCCCGAGGGCGAAGGCCATTGGGTTTGGGGCCATGGTGGAGGGCACTTCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS-3UTR GCA 90 bp | CCATTTATTGTGACAGATACGGCCCACGGACCTGAAGTGCCCTCCACCATGGCCTCTTGCGGCAGTCTGTaGTCCCCATCTCCATCGTCA | + |
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Preference number: 4 (lower is better) Translates to: PFIVTDTAHGPEVPSTMASCGSL*SPSPSS Trigger: TGACGATGGAGATGGGGAGCACAGACTGCCGCAAGA...GGCCATGGTGGAGGGCACTTCAGGTCCGTGGGCCGTATCTGTCACAATAAATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS-3UTR CCA 90 bp | CCATTTATTGTGACAGATACGGCCCACGGACCTGAAGTGCCCTCCACCATGGCCTGCAAGAAGCAGCACTaGCCATTTATTGTGACAGAT | + |
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Preference number: 4 (lower is better) Translates to: PFIVTDTAHGPEVPSTMACKKQH*PFIVTD Trigger: ATCTGTCACAATAAATGGCCAGTGCTGCTTCTTGCA...GGCCATGGTGGAGGGCACTTCAGGTCCGTGGGCCGTATCTGTCACAATAAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS GCA 90 bp | GCACCTGCGGGTCGTCGGGCGACAGGTCCCGGAGTTCTCCGACCATaGGCTCCTGCGGCCGGGCCCGGGCGTCGCGTGGCAGCGCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: APAGRRATGPGVLRP*APAAGPGRRVAAPG Trigger: TCCTGGCGCTGCCACGCGACGCCCGGGCCCGGCCGCAGGAGCGCATGGTCGGAGAACTCCGGGACCTGTCGCCCGACGACCCGCAGGTGC 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS GCA 90 bp | GGGTCGTCGGGCGACAGGTCCCGGAGTTCTCCGACCATGCGCTCCTaGGGCCGGGCCCGGGCGTCGCGTGGCAGCGCCAGGAGGCAGAAT | + |
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Preference number: 5 (lower is better) Translates to: GSSGDRSRSSPTMRS*GRARASRGSARRQN Trigger: ATTCTGCCTCCTGGCGCTGCCACGCGACGCCCGGGCCCGGCCGCAGGAGCGCATGGTCGGAGAACTCCGGGACCTGTCGCCCGACGACCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS CCA 90 bp | GCGTGTCTCGGAAGTAGTAGATGCTGTTGCTGCCCATGTTGTAGCTaGCCACGGCCGCCTGCGCCGCCTTCTGCACCTGCGGGTCGTCGG | + |
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Preference number: 5 (lower is better) Translates to: ACLGSSRCCCCPCCS*PRPPAPPSAPAGRR Trigger: CCGACGACCCGCAGGTGCAGAAGGCGGCGCAGGCGGCCGTGGCCAGCTACAACATGGGCAGCAACAGCATCTACTACTTCCGAGACACGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS-3UTR CAA 90 bp | CTGAAGTGCCCTCCACCATGGCCCCAAACCCAATGGCCTTCGCCCTCGGGGACTCCAGTGACCCTGGTCTaGCGGCAGTCTGTGCTCCCC | + |
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Preference number: 5 (lower is better) Translates to: LKCPPPWPQTQWPSPSGTPVTLV*RQSVLP Trigger: GGGGAGCACAGACTGCCGCAAGACCAGGGTCACTGG...AGTCCCCGAGGGCGAAGGCCATTGGGTTTGGGGCCATGGTGGAGGGCACTTCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS-3UTR CAA 90 bp | CCTGAAGTGCCCTCCACCATGGCCCCAAACCCAATGGCCTTCGCCCTCGGGGACAGCTGGCTCTGCGCCTaGATGATGTGCGTGTCTCGG | + |
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Preference number: 5 (lower is better) Translates to: PEVPSTMAPNPMAFALGDSWLCA*MMCVSR Trigger: CCGAGACACGCACATCATCAAGGCGCAGAGCCAGCT...GTCCCCGAGGGCGAAGGCCATTGGGTTTGGGGCCATGGTGGAGGGCACTTCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS-3UTR CAA 90 bp | CCTGAAGTGCCCTCCACCATGGCCCCAAACCCAATGGCCTTCGCCCTCGGGGACATCGTCAGGAAGTACTaGATGCCGGCCACCAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: PEVPSTMAPNPMAFALGDIVRKY*MPATSW Trigger: CCAGCTGGTGGCCGGCATCAAGTACTTCCTGACGAT...GTCCCCGAGGGCGAAGGCCATTGGGTTTGGGGCCATGGTGGAGGGCACTTCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS TCA 90 bp | CCCTCGGGGACTTATCACATCTGCACACAGTTGTGCTTTAGGAGCTaGGAGGAGTTCTGCCAGGGAACCACAAGGACCTCAAAGTCACAG | + |
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Preference number: 5 (lower is better) Translates to: PSGTYHICTQLCFRS*EEFCQGTTRTSKSQ Trigger: CTGTGACTTTGAGGTCCTTGTGGTTCCCTGGCAGAACTCCTCTCAGCTCCTAAAGCACAACTGTGTGCAGATGTGATAAGTCCCCGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS GCA 72 bp | GGTCGTCGGGCGACAGGTCCCGGAGTTCTCCGACCATaGGCTCCTGCGGCCGGGCCCGGGCGTCGCGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: GRRATGPGVLRP*APAAGPGRRVA Trigger: TGCCACGCGACGCCCGGGCCCGGCCGCAGGAGCGCATGGTCGGAGAACTCCGGGACCTGTCGCCCGACGACC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS CCA 72 bp | GCCCCTGCTGCCAGGGGGCAAGTGGTGAGGTCGACGTaGTCTCCAGTGACCCTGGTCTTGCGGCAGTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: APAARGQVVRST*SPVTLVLRQSV Trigger: CACAGACTGCCGCAAGACCAGGGTCACTGGAGACCACGTCGACCTCACCACTTGCCCCCTGGCAGCAGGGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS GCA 72 bp | CTCAAAGTCACAGCGCAGCTTCTCCTGCTGCGCCCCTaGTGCCAGGGGGCAAGTGGTGAGGTCGACGTGGTC | + |
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Preference number: 6 (lower is better) Translates to: LKVTAQLLLLRP*CQGASGEVDVV Trigger: GACCACGTCGACCTCACCACTTGCCCCCTGGCAGCAGGGGCGCAGCAGGAGAAGCTGCGCTGTGACTTTGAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS CCA 72 bp | GGAAGTAGTAGATGCTGTTGCTGCCCATGTTGTAGCTaGCCACGGCCGCCTGCGCCGCCTTCTGCACCTGCG | + |
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Preference number: 6 (lower is better) Translates to: GSSRCCCCPCCS*PRPPAPPSAPA Trigger: CGCAGGTGCAGAAGGCGGCGCAGGCGGCCGTGGCCAGCTACAACATGGGCAGCAACAGCATCTACTACTTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS CAA 72 bp | GTGGTGAGGTCGACGTGGTCTCCAGTGACCCTGGTCTaGCGGCAGTCTGTGCTCCCCATCTCCATCGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: VVRSTWSPVTLV*RQSVLPISIVR Trigger: CCTGACGATGGAGATGGGGAGCACAGACTGCCGCAAGACCAGGGTCACTGGAGACCACGTCGACCTCACCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS CAA 90 bp | AGGGGGCAAGTGGTGAGGTCGACGTGGTCTCCAGTGACCCTGGTCTaGCGGCAGTCTGTGCTCCCCATCTCCATCGTCAGGAAGTACTTG | + |
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Preference number: 6 (lower is better) Translates to: RGQVVRSTWSPVTLV*RQSVLPISIVRKYL Trigger: CAAGTACTTCCTGACGATGGAGATGGGGAGCACAGACTGCCGCAAGACCAGGGTCACTGGAGACCACGTCGACCTCACCACTTGCCCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS CAA 72 bp | CAGTCTGTGCTCCCCATCTCCATCGTCAGGAAGTACTaGATGCCGGCCACCAGCTGGCTCTGCGCCTTGATG | + |
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Preference number: 6 (lower is better) Translates to: QSVLPISIVRKY*MPATSWLCALM Trigger: CATCAAGGCGCAGAGCCAGCTGGTGGCCGGCATCAAGTACTTCCTGACGATGGAGATGGGGAGCACAGACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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| CDS TCA 72 bp | ACTTATCACATCTGCACACAGTTGTGCTTTAGGAGCTaGGAGGAGTTCTGCCAGGGAACCACAAGGACCTCA | + |
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Preference number: 6 (lower is better) Translates to: TYHICTQLCFRS*EEFCQGTTRTS Trigger: TGAGGTCCTTGTGGTTCCCTGGCAGAACTCCTCTCAGCTCCTAAAGCACAACTGTGTGCAGATGTGATAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312134.3 |
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