Pregenerated sensors for CST11 (Homo sapiens)
Ensembl gene IDs: ENSG00000125831Ensembl transcript IDs: ENST00000377007.3, ENST00000377009.8
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TATGTTGACAAACATTTATTGCCTATATTAAGGATTATTGCCCATTaGAGGATTCTCTCACATGCAGTGGCCGCAGTTGTACACTCCAGG | + |
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Preference number: 1 (lower is better) Translates to: YVDKHLLPILRIIAH*RILSHAVAAVVHSR Trigger: CCTGGAGTGTACAACTGCGGCCACTGCATGTGAGAGAATCCTGCAATGGGCAATAATCCTTAATATAGGCAATAAATGTTTGTCAACATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| 3UTR GCA 72 bp | AAACATTTATTGCCTATATTAAGGATTATTGCCCATTaGAGGATTCTCTCACATGCAGTGGCCGCAGTTGTA | + |
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Preference number: 3 (lower is better) Translates to: KHLLPILRIIAH*RILSHAVAAVV Trigger: TACAACTGCGGCCACTGCATGTGAGAGAATCCTGCAATGGGCAATAATCCTTAATATAGGCAATAAATGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS-3UTR GCA 90 bp | TATTGCCCATTGCAGGATTCTCTCACATGCAGTGGCCGCAGTTGTACACTCCAGAGGAGCTGTAGGGCCTaGCAGGGCTCAGCCATCATC | + |
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Preference number: 4 (lower is better) Translates to: YCPLQDSLTCSGRSCTLQRSCRA*QGSAII Trigger: GATGATGGCTGAGCCCTGGCAGGCCCTACAGCTCCT...CTGGAGTGTACAACTGCGGCCACTGCATGTGAGAGAATCCTGCAATGGGCAATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS-3UTR TCA 90 bp | TTGCCCATTGCAGGATTCTCTCACATGCAGTGGCCGCAGTTGTACACTCCAGGACAGTTGACTTGCTTGTaGAGCTCCCTTTCCTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: LPIAGFSHMQWPQLYTPGQLTCL*SSLSWG Trigger: CCCCCAGGAAAGGGAGCTTCACAAGCAAGTCAACTG...TCCTGGAGTGTACAACTGCGGCCACTGCATGTGAGAGAATCCTGCAATGGGCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377009.8 |
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| CDS-3UTR CCA 90 bp | GCCCATTGCAGGATTCTCTCACATGCAGTGGCCGCAGTTGTACACTCCAGGACAGTGGTCTCTGGCTTTTaGCAGGTGGTCCACTGCATT | + |
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Preference number: 4 (lower is better) Translates to: AHCRILSHAVAAVVHSRTVVSGF*QVVHCI Trigger: AATGCAGTGGACCACCTGCCAAAAGCCAGAGACCAC...TGTCCTGGAGTGTACAACTGCGGCCACTGCATGTGAGAGAATCCTGCAATGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377009.8 |
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| CDS-3UTR TCA 90 bp | CCCATTGCAGGATTCTCTCACATGCAGTGGCCGCAGTTGTACACTCCAGGACACGGGTACAGCAAACACTaGGAAGAAGCAGTTGACTTG | + |
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Preference number: 4 (lower is better) Translates to: PIAGFSHMQWPQLYTPGHGYSKH*EEAVDL Trigger: CAAGTCAACTGCTTCTTCTCAGTGTTTGCTGTACCC...GTGTCCTGGAGTGTACAACTGCGGCCACTGCATGTGAGAGAATCCTGCAATGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS-3UTR TCA 90 bp | CCCATTGCAGGATTCTCTCACATGCAGTGGCCGCAGTTGTACACTCCAGGACACATTTCCACATTCAGGTaGTACTCCAGGTGGTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: PIAGFSHMQWPQLYTPGHISTFR*YSRWSV Trigger: CACTGACCACCTGGAGTATCACCTGAATGTGGAAAT...GTGTCCTGGAGTGTACAACTGCGGCCACTGCATGTGAGAGAATCCTGCAATGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377009.8 |
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| CDS-3UTR GCA 90 bp | TATTGCCCATTGCAGGATTCTCTCACATGCAGTGGCCGCAGTTGTACACTCCAGCAGGATTCTCTCACATaGAGTGGCCGCAGTTGTACA | + |
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Preference number: 4 (lower is better) Translates to: YCPLQDSLTCSGRSCTLQQDSLT*SGRSCT Trigger: TGTACAACTGCGGCCACTGCATGTGAGAGAATCCTG...CTGGAGTGTACAACTGCGGCCACTGCATGTGAGAGAATCCTGCAATGGGCAATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS-3UTR CCA 90 bp | TATTGCCCATTGCAGGATTCTCTCACATGCAGTGGCCGCAGTTGTACACTCCAGCTGGCTTTTGGCAGGTaGTCCACTGCATTTCCACAT | + |
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Preference number: 4 (lower is better) Translates to: YCPLQDSLTCSGRSCTLQLAFGR*STAFPH Trigger: ATGTGGAAATGCAGTGGACCACCTGCCAAAAGCCAG...CTGGAGTGTACAACTGCGGCCACTGCATGTGAGAGAATCCTGCAATGGGCAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377009.8 |
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| CDS-3UTR CCA 90 bp | CCTATATTAAGGATTATTGCCCATTGCAGGATTCTCTCACATGCAGTGGCCGCAGGGGGACACAGTTCGTaGTCTCTGGCTTTTGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: PILRIIAHCRILSHAVAAGGHSS*SLAFGR Trigger: CCTGCCAAAAGCCAGAGACCACGAACTGTGTCCCCC...TGCGGCCACTGCATGTGAGAGAATCCTGCAATGGGCAATAATCCTTAATATAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377009.8 |
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| CDS-3UTR GCA 90 bp | CCCATTGCAGGATTCTCTCACATGCAGTGGCCGCAGTTGTACACTCCAGGACACAGGATTATTGCCCATTaGAGGATTCTCTCACATGCA | + |
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Preference number: 4 (lower is better) Translates to: PIAGFSHMQWPQLYTPGHRIIAH*RILSHA Trigger: TGCATGTGAGAGAATCCTGCAATGGGCAATAATCCT...GTGTCCTGGAGTGTACAACTGCGGCCACTGCATGTGAGAGAATCCTGCAATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS-3UTR CCA 90 bp | ATTGCCCATTGCAGGATTCTCTCACATGCAGTGGCCGCAGTTGTACACTCCAGGCTTTCCTTGTTATACTaGTCGGTGATCCACTGCAAG | + |
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Preference number: 4 (lower is better) Translates to: IAHCRILSHAVAAVVHSRLSLLY*SVIHCK Trigger: CTTGCAGTGGATCACCGACCAGTATAACAAGGAAAG...CCTGGAGTGTACAACTGCGGCCACTGCATGTGAGAGAATCCTGCAATGGGCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS-3UTR GCA 90 bp | AAGGATTATTGCCCATTGCAGGATTCTCTCACATGCAGTGGCCGCAGTTGTACACCATCATCCTTCAGCTaGAGAGGAACAGGAAGAGTG | + |
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Preference number: 4 (lower is better) Translates to: KDYCPLQDSLTCSGRSCTPSSFS*RGTGRV Trigger: CACTCTTCCTGTTCCTCTGCAGCTGAAGGATGATGG...TGTACAACTGCGGCCACTGCATGTGAGAGAATCCTGCAATGGGCAATAATCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS-3UTR CCA 90 bp | GCCTATATTAAGGATTATTGCCCATTGCAGGATTCTCTCACATGCAGTGGCCGCTTCTCTCACATGCAGTaGCCGCAGTTGTACACTCCA | + |
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Preference number: 4 (lower is better) Translates to: AYIKDYCPLQDSLTCSGRFSHMQ*PQLYTP Trigger: TGGAGTGTACAACTGCGGCCACTGCATGTGAGAGAA...GCGGCCACTGCATGTGAGAGAATCCTGCAATGGGCAATAATCCTTAATATAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS-3UTR TCA 90 bp | ATTAAGGATTATTGCCCATTGCAGGATTCTCTCACATGCAGTGGCCGCAGTTGTGGACTCGGAAGATCCTaGAGTGGTACTTGTCATCAC | + |
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Preference number: 4 (lower is better) Translates to: IKDYCPLQDSLTCSGRSCGLGRS*SGTCHH Trigger: GTGATGACAAGTACCACTTCAGGATCTTCCGAGTCC...ACAACTGCGGCCACTGCATGTGAGAGAATCCTGCAATGGGCAATAATCCTTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS-3UTR GCA 90 bp | TTAAGGATTATTGCCCATTGCAGGATTCTCTCACATGCAGTGGCCGCAGTTGTAAGGTGGTCAGTGACCTaGCTCTGGACTTTAAGGACT | + |
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Preference number: 4 (lower is better) Translates to: LRIIAHCRILSHAVAAVVRWSVT*LWTLRT Trigger: AGTCCTTAAAGTCCAGAGGCAGGTCACTGACCACCT...TACAACTGCGGCCACTGCATGTGAGAGAATCCTGCAATGGGCAATAATCCTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377009.8 |
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| CDS-3UTR CCA 90 bp | TTGCCTATATTAAGGATTATTGCCCATTGCAGGATTCTCTCACATGCAGTGGCCACAGTTCGTGGTCTCTaGCTTTTGGCAGGTGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: LPILRIIAHCRILSHAVATVRGL*LLAGGP Trigger: TGGACCACCTGCCAAAAGCCAGAGACCACGAACTGT...GGCCACTGCATGTGAGAGAATCCTGCAATGGGCAATAATCCTTAATATAGGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377009.8 |
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| CDS-3UTR GCA 90 bp | ATATTAAGGATTATTGCCCATTGCAGGATTCTCTCACATGCAGTGGCCGCAGTTCCATCATCCTTCAGCTaGAGAGGAACAGGAAGAGTG | + |
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Preference number: 4 (lower is better) Translates to: ILRIIAHCRILSHAVAAVPSSFS*RGTGRV Trigger: CACTCTTCCTGTTCCTCTGCAGCTGAAGGATGATGG...AACTGCGGCCACTGCATGTGAGAGAATCCTGCAATGGGCAATAATCCTTAATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS-3UTR GCA 90 bp | AAGGATTATTGCCCATTGCAGGATTCTCTCACATGCAGTGGCCGCAGTTGTACAAAGAAGCAGTTGACTTaGTGCCTCTGGACTTTAAGG | + |
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Preference number: 4 (lower is better) Translates to: KDYCPLQDSLTCSGRSCTKKQLT*CLWTLR Trigger: CCTTAAAGTCCAGAGGCAGCAAGTCAACTGCTTCTT...TGTACAACTGCGGCCACTGCATGTGAGAGAATCCTGCAATGGGCAATAATCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377007.3 |
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| CDS-3UTR GCA 90 bp | GGATTATTGCCCATTGCAGGATTCTCTCACATGCAGTGGCCGCAGTTGTACACTAGGATTATTGCCCATTaGAGGATTCTCTCACATGCA | + |
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Preference number: 4 (lower is better) Translates to: GLLPIAGFSHMQWPQLYTRIIAH*RILSHA Trigger: TGCATGTGAGAGAATCCTGCAATGGGCAATAATCCT...AGTGTACAACTGCGGCCACTGCATGTGAGAGAATCCTGCAATGGGCAATAATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS-3UTR CCA 90 bp | ATTATTGCCCATTGCAGGATTCTCTCACATGCAGTGGCCGCAGTTGTACACTCCACTGCCATCACTTCATaGACGCTTAGAAAGGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: IIAHCRILSHAVAAVVHSTAITS*TLRKVF Trigger: GAAAACCTTTCTAAGCGTCCATGAAGTGATGGCAGT...GGAGTGTACAACTGCGGCCACTGCATGTGAGAGAATCCTGCAATGGGCAATAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS-3UTR TCA 90 bp | ATTGCCTATATTAAGGATTATTGCCCATTGCAGGATTCTCTCACATGCAGTGGCGGACTCGGAAGATCCTaGAGTGGTACTTGTCATCAC | + |
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Preference number: 4 (lower is better) Translates to: IAYIKDYCPLQDSLTCSGGLGRS*SGTCHH Trigger: GTGATGACAAGTACCACTTCAGGATCTTCCGAGTCC...GCCACTGCATGTGAGAGAATCCTGCAATGGGCAATAATCCTTAATATAGGCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS-3UTR TCA 90 bp | ATTGCCTATATTAAGGATTATTGCCCATTGCAGGATTCTCTCACATGCAGTGGCCTGAGAAGAAGCAGTTaGCTTGCTTGTGAAGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: IAYIKDYCPLQDSLTCSGLRRSS*LACEAP Trigger: GGGAGCTTCACAAGCAAGTCAACTGCTTCTTCTCAG...GCCACTGCATGTGAGAGAATCCTGCAATGGGCAATAATCCTTAATATAGGCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377009.8 |
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| CDS-3UTR GCA 90 bp | GACAAACATTTATTGCCTATATTAAGGATTATTGCCCATTGCAGGATTCTCTCAAGGAGCTGTAGGGCCTaGCAGGGCTCAGCCATCATC | + |
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Preference number: 4 (lower is better) Translates to: DKHLLPILRIIAHCRILSRSCRA*QGSAII Trigger: GATGATGGCTGAGCCCTGGCAGGCCCTACAGCTCCT...TGAGAGAATCCTGCAATGGGCAATAATCCTTAATATAGGCAATAAATGTTTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS-3UTR GCA 90 bp | TATATTAAGGATTATTGCCCATTGCAGGATTCTCTCACATGCAGTGGCCGCAGTAAAGGTTTTCTTCCTTaGTTGGTAGGGGAGGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: YIKDYCPLQDSLTCSGRSKGFLP*LVGEGH Trigger: ATGGCCCTCCCCTACCAAGCAAGGAAGAAAACCTTT...ACTGCGGCCACTGCATGTGAGAGAATCCTGCAATGGGCAATAATCCTTAATATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS-3UTR GCA 90 bp | TTGCCCATTGCAGGATTCTCTCACATGCAGTGGCCGCAGTTGTACACTCCAGGATATATTAAGGATTATTaGCCATTGCAGGATTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: LPIAGFSHMQWPQLYTPGYIKDY*PLQDSL Trigger: GAGAGAATCCTGCAATGGGCAATAATCCTTAATATA...TCCTGGAGTGTACAACTGCGGCCACTGCATGTGAGAGAATCCTGCAATGGGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS-3UTR CCA 90 bp | ATTGCCTATATTAAGGATTATTGCCCATTGCAGGATTCTCTCACATGCAGTGGCTTCTCTCACATGCAGTaGCCGCAGTTGTACACTCCA | + |
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Preference number: 4 (lower is better) Translates to: IAYIKDYCPLQDSLTCSGFSHMQ*PQLYTP Trigger: TGGAGTGTACAACTGCGGCCACTGCATGTGAGAGAA...GCCACTGCATGTGAGAGAATCCTGCAATGGGCAATAATCCTTAATATAGGCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS-3UTR GCA 90 bp | TATATTAAGGATTATTGCCCATTGCAGGATTCTCTCACATGCAGTGGCCGCAGTCGCATAGTTTTCTACTaGCATCACTTCATGGACGCT | + |
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Preference number: 4 (lower is better) Translates to: YIKDYCPLQDSLTCSGRSRIVFY*HHFMDA Trigger: AGCGTCCATGAAGTGATGGCAGTAGAAAACTATGCG...ACTGCGGCCACTGCATGTGAGAGAATCCTGCAATGGGCAATAATCCTTAATATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS-3UTR GCA 90 bp | TTGCCTATATTAAGGATTATTGCCCATTGCAGGATTCTCTCACATGCAGTGGCCAAGCAGTTGACTTGCTaGCTCTGGACTTTAAGGACT | + |
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Preference number: 4 (lower is better) Translates to: LPILRIIAHCRILSHAVAKQLTC*LWTLRT Trigger: AGTCCTTAAAGTCCAGAGGCAGCAAGTCAACTGCTT...GGCCACTGCATGTGAGAGAATCCTGCAATGGGCAATAATCCTTAATATAGGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377007.3 |
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| CDS-3UTR GCA 90 bp | TTATTGCCCATTGCAGGATTCTCTCACATGCAGTGGCCGCAGTTGTACACTCCAACACCTAGTCACTGCTaGAGCTTTTGTTCAAAATTT | + |
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Preference number: 4 (lower is better) Translates to: LLPIAGFSHMQWPQLYTPTPSHC*SFCSKF Trigger: AAATTTTGAACAAAAGCTGCAGCAGTGACTAGGTGT...TGGAGTGTACAACTGCGGCCACTGCATGTGAGAGAATCCTGCAATGGGCAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS-3UTR TCA 90 bp | TTATTGCCTATATTAAGGATTATTGCCCATTGCAGGATTCTCTCACATGCAGTGCTGAGAAGAAGCAGTTaGCTTGCTGCCTCTGGACTT | + |
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Preference number: 4 (lower is better) Translates to: LLPILRIIAHCRILSHAVLRRSS*LAASGL Trigger: AAGTCCAGAGGCAGCAAGTCAACTGCTTCTTCTCAG...CACTGCATGTGAGAGAATCCTGCAATGGGCAATAATCCTTAATATAGGCAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377007.3 |
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| CDS-3UTR GCA 90 bp | ATTGCCTATATTAAGGATTATTGCCCATTGCAGGATTCTCTCACATGCAGTGGCCGCATAGTTTTCTACTaGCATCACTTCATGGACGCT | + |
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Preference number: 4 (lower is better) Translates to: IAYIKDYCPLQDSLTCSGRIVFY*HHFMDA Trigger: AGCGTCCATGAAGTGATGGCAGTAGAAAACTATGCG...GCCACTGCATGTGAGAGAATCCTGCAATGGGCAATAATCCTTAATATAGGCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS-3UTR GCA 90 bp | AAGGATTATTGCCCATTGCAGGATTCTCTCACATGCAGTGGCCGCAGTTGTACAACACCTAGTCACTGCTaGAGCTTTTGTTCAAAATTT | + |
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Preference number: 4 (lower is better) Translates to: KDYCPLQDSLTCSGRSCTTPSHC*SFCSKF Trigger: AAATTTTGAACAAAAGCTGCAGCAGTGACTAGGTGT...TGTACAACTGCGGCCACTGCATGTGAGAGAATCCTGCAATGGGCAATAATCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS-3UTR CCA 90 bp | ATTGCCTATATTAAGGATTATTGCCCATTGCAGGATTCTCTCACATGCAGTGGCCGGAAGATCCTGAAGTaGTACTTGTCATCACTTTCC | + |
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Preference number: 4 (lower is better) Translates to: IAYIKDYCPLQDSLTCSGRKILK*YLSSLS Trigger: GGAAAGTGATGACAAGTACCACTTCAGGATCTTCCG...GCCACTGCATGTGAGAGAATCCTGCAATGGGCAATAATCCTTAATATAGGCAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS-3UTR CCA 90 bp | CATTTATTGCCTATATTAAGGATTATTGCCCATTGCAGGATTCTCTCACATGCATCAGTGACCTGCCTCTaGACTTTAAGGACTCGGAAG | + |
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Preference number: 4 (lower is better) Translates to: HLLPILRIIAHCRILSHASVTCL*TLRTRK Trigger: CTTCCGAGTCCTTAAAGTCCAGAGGCAGGTCACTGA...TGCATGTGAGAGAATCCTGCAATGGGCAATAATCCTTAATATAGGCAATAAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377009.8 |
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| CDS-3UTR TCA 90 bp | ACATTTATTGCCTATATTAAGGATTATTGCCCATTGCAGGATTCTCTCACATGCGGGTACAGCAAACACTaGGAAGAAGCAGTTGACTTG | + |
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Preference number: 4 (lower is better) Translates to: TFIAYIKDYCPLQDSLTCGYSKH*EEAVDL Trigger: CAAGTCAACTGCTTCTTCTCAGTGTTTGCTGTACCC...GCATGTGAGAGAATCCTGCAATGGGCAATAATCCTTAATATAGGCAATAAATGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS-3UTR GCA 90 bp | CAAACATTTATTGCCTATATTAAGGATTATTGCCCATTGCAGGATTCTCTCACACAGGATTCTCTCACATaGAGTGGCCGCAGTTGTACA | + |
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Preference number: 4 (lower is better) Translates to: QTFIAYIKDYCPLQDSLTQDSLT*SGRSCT Trigger: TGTACAACTGCGGCCACTGCATGTGAGAGAATCCTG...TGTGAGAGAATCCTGCAATGGGCAATAATCCTTAATATAGGCAATAAATGTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS-3UTR GCA 90 bp | ATTAAGGATTATTGCCCATTGCAGGATTCTCTCACATGCAGTGGCCGCAGTTGTTATATTAAGGATTATTaGCCATTGCAGGATTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: IKDYCPLQDSLTCSGRSCYIKDY*PLQDSL Trigger: GAGAGAATCCTGCAATGGGCAATAATCCTTAATATA...ACAACTGCGGCCACTGCATGTGAGAGAATCCTGCAATGGGCAATAATCCTTAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS-3UTR CCA 90 bp | TTATTGCCTATATTAAGGATTATTGCCCATTGCAGGATTCTCTCACATGCAGTGCTTTCCTTGTTATACTaGTCGGTGATCCACTGCAAG | + |
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Preference number: 4 (lower is better) Translates to: LLPILRIIAHCRILSHAVLSLLY*SVIHCK Trigger: CTTGCAGTGGATCACCGACCAGTATAACAAGGAAAG...CACTGCATGTGAGAGAATCCTGCAATGGGCAATAATCCTTAATATAGGCAATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS-3UTR CCA 90 bp | CAAACATTTATTGCCTATATTAAGGATTATTGCCCATTGCAGGATTCTCTCACAACTGCCATCACTTCATaGACGCTTAGAAAGGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: QTFIAYIKDYCPLQDSLTTAITS*TLRKVF Trigger: GAAAACCTTTCTAAGCGTCCATGAAGTGATGGCAGT...TGTGAGAGAATCCTGCAATGGGCAATAATCCTTAATATAGGCAATAAATGTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS GCA 90 bp | AGGGCCATCAGAGTCAATAGAATGGCCAACAGGAGCTGTAGGGCCTaGCAGGGCTCAGCCATCATCCTTCAGCTGCAGAGGAACAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: RAIRVNRMANRSCRA*QGSAIILQLQRNRK Trigger: CTTCCTGTTCCTCTGCAGCTGAAGGATGATGGCTGAGCCCTGGCAGGCCCTACAGCTCCTGTTGGCCATTCTATTGACTCTGATGGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS CCA 90 bp | CCCTTTCCTGGGGGACACAGTTCGTGGTCTCTGGCTTTTGGCAGGTaGTCCACTGCATTTCCACATTCAGGTGATACTCCAGGTGGTCAG | + |
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Preference number: 5 (lower is better) Translates to: PFPGGHSSWSLAFGR*STAFPHSGDTPGGQ Trigger: CTGACCACCTGGAGTATCACCTGAATGTGGAAATGCAGTGGACCACCTGCCAAAAGCCAGAGACCACGAACTGTGTCCCCCAGGAAAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377009.8 |
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| CDS TCA 90 bp | GTCTCTGGCTTTTGGCAGGTGGTCCACTGCATTTCCACATTCAGGTaGTACTCCAGGTGGTCAGTGACCTGCCTCTGGACTTTAAGGACT | + |
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Preference number: 5 (lower is better) Translates to: VSGFWQVVHCISTFR*YSRWSVTCLWTLRT Trigger: AGTCCTTAAAGTCCAGAGGCAGGTCACTGACCACCTGGAGTATCACCTGAATGTGGAAATGCAGTGGACCACCTGCCAAAAGCCAGAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377009.8 |
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| CDS CCA 90 bp | TTGCTTGTGAAGCTCCCTTTCCTGGGGGACACAGTTCGTGGTCTCTaGCTTTTGGCAGGTGGTCCACTGCATTTCCACATTCAGGTGATA | + |
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Preference number: 5 (lower is better) Translates to: LLVKLPFLGDTVRGL*LLAGGPLHFHIQVI Trigger: TATCACCTGAATGTGGAAATGCAGTGGACCACCTGCCAAAAGCCAGAGACCACGAACTGTGTCCCCCAGGAAAGGGAGCTTCACAAGCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377009.8 |
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| CDS-3UTR CAA 90 bp | AGGATTATTGCCCATTGCAGGATTCTCTCACATGCAGTGGCCGCAGTTGTACACGGTTTTCTTCCTTGCTaGGTAGGGGAGGGCCATCAG | + |
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Preference number: 5 (lower is better) Translates to: RIIAHCRILSHAVAAVVHGFLPC*VGEGHQ Trigger: CTGATGGCCCTCCCCTACCAAGCAAGGAAGAAAACC...GTGTACAACTGCGGCCACTGCATGTGAGAGAATCCTGCAATGGGCAATAATCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS-3UTR CAA 90 bp | CCTATATTAAGGATTATTGCCCATTGCAGGATTCTCTCACATGCAGTGGCCGCAATGCAGTGGCCGCAGTaGTACACTCCAGGACACCTA | + |
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Preference number: 5 (lower is better) Translates to: PILRIIAHCRILSHAVAAMQWPQ*YTPGHL Trigger: TAGGTGTCCTGGAGTGTACAACTGCGGCCACTGCAT...TGCGGCCACTGCATGTGAGAGAATCCTGCAATGGGCAATAATCCTTAATATAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS-3UTR CAA 90 bp | TTGCCTATATTAAGGATTATTGCCCATTGCAGGATTCTCTCACATGCAGTGGCCGGTTTTCTTCCTTGCTaGGTAGGGGAGGGCCATCAG | + |
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Preference number: 5 (lower is better) Translates to: LPILRIIAHCRILSHAVAGFLPC*VGEGHQ Trigger: CTGATGGCCCTCCCCTACCAAGCAAGGAAGAAAACC...GGCCACTGCATGTGAGAGAATCCTGCAATGGGCAATAATCCTTAATATAGGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS CCA 90 bp | TCAGTGACCTGCCTCTGGACTTTAAGGACTCGGAAGATCCTGAAGTaGTACTTGTCATCACTTTCCTTGTTATACTGGTCGGTGATCCAC | + |
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Preference number: 5 (lower is better) Translates to: SVTCLWTLRTRKILK*YLSSLSLLYWSVIH Trigger: GTGGATCACCGACCAGTATAACAAGGAAAGTGATGACAAGTACCACTTCAGGATCTTCCGAGTCCTTAAAGTCCAGAGGCAGGTCACTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377009.8 |
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| CDS-3UTR CAA 90 bp | GCCTATATTAAGGATTATTGCCCATTGCAGGATTCTCTCACATGCAGTGGCCGCGAAGAAGCAGTTGACTaGCTGCCTCTGGACTTTAAG | + |
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Preference number: 5 (lower is better) Translates to: AYIKDYCPLQDSLTCSGREEAVD*LPLDFK Trigger: CTTAAAGTCCAGAGGCAGCAAGTCAACTGCTTCTTC...GCGGCCACTGCATGTGAGAGAATCCTGCAATGGGCAATAATCCTTAATATAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377007.3 |
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| CDS-3UTR CAA 90 bp | ATTATTGCCCATTGCAGGATTCTCTCACATGCAGTGGCCGCAGTTGTACACTCCAAGGATTATTGCCCATaGCAGGATTCTCTCACATGC | + |
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Preference number: 5 (lower is better) Translates to: IIAHCRILSHAVAAVVHSKDYCP*QDSLTC Trigger: GCATGTGAGAGAATCCTGCAATGGGCAATAATCCTT...GGAGTGTACAACTGCGGCCACTGCATGTGAGAGAATCCTGCAATGGGCAATAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS-3UTR CAA 90 bp | GGATTATTGCCCATTGCAGGATTCTCTCACATGCAGTGGCCGCAGTTGTACACTTTGTCATCACTTTCCTaGTTATACTGGTCGGTGATC | + |
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Preference number: 5 (lower is better) Translates to: GLLPIAGFSHMQWPQLYTLSSLS*LYWSVI Trigger: GATCACCGACCAGTATAACAAGGAAAGTGATGACAA...AGTGTACAACTGCGGCCACTGCATGTGAGAGAATCCTGCAATGGGCAATAATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS-3UTR CAA 90 bp | AAGGATTATTGCCCATTGCAGGATTCTCTCACATGCAGTGGCCGCAGTTGTACATTGTCATCACTTTCCTaGTTATACTGGTCGGTGATC | + |
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Preference number: 5 (lower is better) Translates to: KDYCPLQDSLTCSGRSCTLSSLS*LYWSVI Trigger: GATCACCGACCAGTATAACAAGGAAAGTGATGACAA...TGTACAACTGCGGCCACTGCATGTGAGAGAATCCTGCAATGGGCAATAATCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS-3UTR CAA 90 bp | ATTGCCTATATTAAGGATTATTGCCCATTGCAGGATTCTCTCACATGCAGTGGCACTGAGAAGAAGCAGTaGACTTGCTGCCTCTGGACT | + |
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Preference number: 5 (lower is better) Translates to: IAYIKDYCPLQDSLTCSGTEKKQ*TCCLWT Trigger: AGTCCAGAGGCAGCAAGTCAACTGCTTCTTCTCAGT...GCCACTGCATGTGAGAGAATCCTGCAATGGGCAATAATCCTTAATATAGGCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377007.3 |
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| CDS-3UTR CAA 90 bp | TTATTGCCTATATTAAGGATTATTGCCCATTGCAGGATTCTCTCACATGCAGTGATGCAGTGGCCGCAGTaGTACACTCCAGGACACCTA | + |
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Preference number: 5 (lower is better) Translates to: LLPILRIIAHCRILSHAVMQWPQ*YTPGHL Trigger: TAGGTGTCCTGGAGTGTACAACTGCGGCCACTGCAT...CACTGCATGTGAGAGAATCCTGCAATGGGCAATAATCCTTAATATAGGCAATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS-3UTR CAA 90 bp | TTAAGGATTATTGCCCATTGCAGGATTCTCTCACATGCAGTGGCCGCAGTTGTAAAGGATTATTGCCCATaGCAGGATTCTCTCACATGC | + |
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Preference number: 5 (lower is better) Translates to: LRIIAHCRILSHAVAAVVKDYCP*QDSLTC Trigger: GCATGTGAGAGAATCCTGCAATGGGCAATAATCCTT...TACAACTGCGGCCACTGCATGTGAGAGAATCCTGCAATGGGCAATAATCCTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS-3UTR CAA 90 bp | TTTATTGCCTATATTAAGGATTATTGCCCATTGCAGGATTCTCTCACATGCAGTCGTGGTCTCTGGCTTTaGGCAGGTGGTCCACTGCAT | + |
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Preference number: 5 (lower is better) Translates to: FIAYIKDYCPLQDSLTCSRGLWL*AGGPLH Trigger: ATGCAGTGGACCACCTGCCAAAAGCCAGAGACCACG...ACTGCATGTGAGAGAATCCTGCAATGGGCAATAATCCTTAATATAGGCAATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377009.8 |
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| CDS TCA 90 bp | TTTGTTCAAAATTTTGTACTGTTCAAACCAGGGTACAGCAAACACTaGGAAGAAGCAGTTGACTTGCTTGTGAAGCTCCCTTTCCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: FVQNFVLFKPGYSKH*EEAVDLLVKLPFLG Trigger: CCCCAGGAAAGGGAGCTTCACAAGCAAGTCAACTGCTTCTTCTCAGTGTTTGCTGTACCCTGGTTTGAACAGTACAAAATTTTGAACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000377009.8 |
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| CDS-3UTR CAA 90 bp | TTAAGGATTATTGCCCATTGCAGGATTCTCTCACATGCAGTGGCCGCAGTTGTATCACTGCTGCAGCTTTaGTTCAAAATTTTGTACTGT | + |
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Preference number: 5 (lower is better) Translates to: LRIIAHCRILSHAVAAVVSLLQL*FKILYC Trigger: ACAGTACAAAATTTTGAACAAAAGCTGCAGCAGTGA...TACAACTGCGGCCACTGCATGTGAGAGAATCCTGCAATGGGCAATAATCCTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS-3UTR CAA 90 bp | ATATTAAGGATTATTGCCCATTGCAGGATTCTCTCACATGCAGTGGCCGCAGTTTCACTGCTGCAGCTTTaGTTCAAAATTTTGTACTGT | + |
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Preference number: 5 (lower is better) Translates to: ILRIIAHCRILSHAVAAVSLLQL*FKILYC Trigger: ACAGTACAAAATTTTGAACAAAAGCTGCAGCAGTGA...AACTGCGGCCACTGCATGTGAGAGAATCCTGCAATGGGCAATAATCCTTAATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS-3UTR CAA 90 bp | CATTTATTGCCTATATTAAGGATTATTGCCCATTGCAGGATTCTCTCACATGCAGAAGAAGCAGTTGACTaGCTTGTGAAGCTCCCTTTC | + |
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Preference number: 5 (lower is better) Translates to: HLLPILRIIAHCRILSHAEEAVD*LVKLPF Trigger: GAAAGGGAGCTTCACAAGCAAGTCAACTGCTTCTTC...TGCATGTGAGAGAATCCTGCAATGGGCAATAATCCTTAATATAGGCAATAAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377009.8 |
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| CDS CCA 72 bp | TTGCTTGGTAGGGGAGGGCCATCAGAGTCAATAGAATaGCCAACAGGAGCTGTAGGGCCTGCCAGGGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: LLGRGGPSESIE*PTGAVGPARAQ Trigger: CTGAGCCCTGGCAGGCCCTACAGCTCCTGTTGGCCATTCTATTGACTCTGATGGCCCTCCCCTACCAAGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS GCA 72 bp | AGAGTCAATAGAATGGCCAACAGGAGCTGTAGGGCCTaGCAGGGCTCAGCCATCATCCTTCAGCTGCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: RVNRMANRSCRA*QGSAIILQLQR Trigger: CCTCTGCAGCTGAAGGATGATGGCTGAGCCCTGGCAGGCCCTACAGCTCCTGTTGGCCATTCTATTGACTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS CCA 72 bp | GCTTGTGAAGCTCCCTTTCCTGGGGGACACAGTTCGTaGTCTCTGGCTTTTGGCAGGTGGTCCACTGCATTT | + |
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Preference number: 6 (lower is better) Translates to: ACEAPFPGGHSS*SLAFGRWSTAF Trigger: AAATGCAGTGGACCACCTGCCAAAAGCCAGAGACCACGAACTGTGTCCCCCAGGAAAGGGAGCTTCACAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377009.8 |
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| CDS CAA 72 bp | CCCATTGCAGGATTCTCTCACATGCAGTGGCCGCAGTaGTACACTCCAGGACACCTAGTCACTGCTGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: PIAGFSHMQWPQ*YTPGHLVTAAA Trigger: AGCTGCAGCAGTGACTAGGTGTCCTGGAGTGTACAACTGCGGCCACTGCATGTGAGAGAATCCTGCAATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS CAA 72 bp | CCTTTCCTGGGGGACACAGTTCGTGGTCTCTGGCTTTaGGCAGGTGGTCCACTGCATTTCCACATTCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: PFLGDTVRGLWL*AGGPLHFHIQV Trigger: CACCTGAATGTGGAAATGCAGTGGACCACCTGCCAAAAGCCAGAGACCACGAACTGTGTCCCCCAGGAAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377009.8 |
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| CDS CAA 90 bp | GTGAAGCTCCCTTTCCTGGGGGACACAGTTCGTGGTCTCTGGCTTTaGGCAGGTGGTCCACTGCATTTCCACATTCAGGTGATACTCCAG | + |
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Preference number: 6 (lower is better) Translates to: VKLPFLGDTVRGLWL*AGGPLHFHIQVILQ Trigger: CTGGAGTATCACCTGAATGTGGAAATGCAGTGGACCACCTGCCAAAAGCCAGAGACCACGAACTGTGTCCCCCAGGAAAGGGAGCTTCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000377009.8 |
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| CDS CCA 72 bp | AAGCTCCCTTTCCTGGGGGACACAGTTCGTGGTCTCTaGCTTTTGGCAGGTGGTCCACTGCATTTCCACATT | + |
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Preference number: 6 (lower is better) Translates to: KLPFLGDTVRGL*LLAGGPLHFHI Trigger: AATGTGGAAATGCAGTGGACCACCTGCCAAAAGCCAGAGACCACGAACTGTGTCCCCCAGGAAAGGGAGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000377009.8 |
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| CDS CCA 72 bp | GGATTATTGCCCATTGCAGGATTCTCTCACATGCAGTaGCCGCAGTTGTACACTCCAGGACACCTAGTCACT | + |
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Preference number: 6 (lower is better) Translates to: GLLPIAGFSHMQ*PQLYTPGHLVT Trigger: AGTGACTAGGTGTCCTGGAGTGTACAACTGCGGCCACTGCATGTGAGAGAATCCTGCAATGGGCAATAATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS CAA 90 bp | GGATTATTGCCCATTGCAGGATTCTCTCACATGCAGTGGCCGCAGTaGTACACTCCAGGACACCTAGTCACTGCTGCAGCTTTTGTTCAA | + |
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Preference number: 6 (lower is better) Translates to: GLLPIAGFSHMQWPQ*YTPGHLVTAAAFVQ Trigger: TTGAACAAAAGCTGCAGCAGTGACTAGGTGTCCTGGAGTGTACAACTGCGGCCACTGCATGTGAGAGAATCCTGCAATGGGCAATAATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS CAA 72 bp | CGGAAGATCCTGAAGTGGTACTTGTCATCACTTTCCTaGTTATACTGGTCGGTGATCCACTGCAAGCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: RKILKWYLSSLS*LYWSVIHCKLS Trigger: GGACAGCTTGCAGTGGATCACCGACCAGTATAACAAGGAAAGTGATGACAAGTACCACTTCAGGATCTTCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS CAA 90 bp | TGCTGCCTCTGGACTTTAAGGACTCGGAAGATCCTGAAGTGGTACTaGTCATCACTTTCCTTGTTATACTGGTCGGTGATCCACTGCAAG | + |
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Preference number: 6 (lower is better) Translates to: CCLWTLRTRKILKWY*SSLSLLYWSVIHCK Trigger: CTTGCAGTGGATCACCGACCAGTATAACAAGGAAAGTGATGACAAGTACCACTTCAGGATCTTCCGAGTCCTTAAAGTCCAGAGGCAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377007.3 |
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| CDS CAA 90 bp | ACCTGCCTCTGGACTTTAAGGACTCGGAAGATCCTGAAGTGGTACTaGTCATCACTTTCCTTGTTATACTGGTCGGTGATCCACTGCAAG | + |
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Preference number: 6 (lower is better) Translates to: TCLWTLRTRKILKWY*SSLSLLYWSVIHCK Trigger: CTTGCAGTGGATCACCGACCAGTATAACAAGGAAAGTGATGACAAGTACCACTTCAGGATCTTCCGAGTCCTTAAAGTCCAGAGGCAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000377009.8 |
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| CDS CAA 90 bp | TTTCTACTGCCATCACTTCATGGACGCTTAGAAAGGTTTTCTTCCTaGCTTGGTAGGGGAGGGCCATCAGAGTCAATAGAATGGCCAACA | + |
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Preference number: 6 (lower is better) Translates to: FLLPSLHGRLERFSS*LGRGGPSESIEWPT Trigger: TGTTGGCCATTCTATTGACTCTGATGGCCCTCCCCTACCAAGCAAGGAAGAAAACCTTTCTAAGCGTCCATGAAGTGATGGCAGTAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS CAA 72 bp | CCATCACTTCATGGACGCTTAGAAAGGTTTTCTTCCTaGCTTGGTAGGGGAGGGCCATCAGAGTCAATAGAA | + |
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Preference number: 6 (lower is better) Translates to: PSLHGRLERFSS*LGRGGPSESIE Trigger: TTCTATTGACTCTGATGGCCCTCCCCTACCAAGCAAGGAAGAAAACCTTTCTAAGCGTCCATGAAGTGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS CCA 72 bp | TGCCTCTGGACTTTAAGGACTCGGAAGATCCTGAAGTaGTACTTGTCATCACTTTCCTTGTTATACTGGTCG | + |
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Preference number: 6 (lower is better) Translates to: CLWTLRTRKILK*YLSSLSLLYWS Trigger: CGACCAGTATAACAAGGAAAGTGATGACAAGTACCACTTCAGGATCTTCCGAGTCCTTAAAGTCCAGAGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS TCA 72 bp | GGTACTTGTCATCACTTTCCTTGTTATACTGGTCGGTaGTCCACTGCAAGCTGTCCTTCGCATAGTTTTCTA | + |
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Preference number: 6 (lower is better) Translates to: GTCHHFPCYTGR*STASCPSHSFL Trigger: TAGAAAACTATGCGAAGGACAGCTTGCAGTGGATCACCGACCAGTATAACAAGGAAAGTGATGACAAGTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS CAA 72 bp | TGGACTTTAAGGACTCGGAAGATCCTGAAGTGGTACTaGTCATCACTTTCCTTGTTATACTGGTCGGTGATC | + |
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Preference number: 6 (lower is better) Translates to: WTLRTRKILKWY*SSLSLLYWSVI Trigger: GATCACCGACCAGTATAACAAGGAAAGTGATGACAAGTACCACTTCAGGATCTTCCGAGTCCTTAAAGTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000377007.3 ENST00000377009.8 |
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| CDS TCA 72 bp | AATTTTGTACTGTTCAAACCAGGGTACAGCAAACACTaGGAAGAAGCAGTTGACTTGCTGCCTCTGGACTTT | + |
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Preference number: 6 (lower is better) Translates to: NFVLFKPGYSKH*EEAVDLLPLDF Trigger: AAAGTCCAGAGGCAGCAAGTCAACTGCTTCTTCTCAGTGTTTGCTGTACCCTGGTTTGAACAGTACAAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000377007.3 |
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