RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CSRP3 (Homo sapiens)

Ensembl gene IDs: ENSG00000129170

Ensembl transcript IDs: ENST00000265968.9, ENST00000533783.2, ENST00000647990.1, ENST00000648719.1, ENST00000649235.1, ENST00000649842.1

Found 255 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCTGAGGAGAAACACATAATGTACGACTACAAAGGAGAGGCTATTTaGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGTGTTTT +
Preference number: 1 (lower is better)
Translates to: SEEKHIMYDYKGEAI*GKVSICAGLLGKCF
Trigger: AAAACACTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTTCTCCTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000648719.1
ENST00000649235.1
3UTR-3UTR CCA 90 bp GAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGTGTTTTCAAACCCAATACCCGTaGGGCCAAAATTTTTGGCAT +
Preference number: 2 (lower is better)
Translates to: EAIWGKVSICAGLLGKCFQTQYP*GQNFWH
Trigger: ATGCCAAAAATTTTGGCCCCACGGGTATTGGGTTTG...AAAACACTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000648719.1
3UTR-3UTR TCA 90 bp TGCCACGCTTTATTGTCATTTCTGAGTTTTCACGAGATGTGTAACATTACAAAGAGAAAGACACTTGGCTaGCAGATTCTGAAAGACTGC +
Preference number: 2 (lower is better)
Translates to: CHALLSFLSFHEMCNITKRKTLG*QILKDC
Trigger: GCAGTCTTTCAGAATCTGTCAGCCAAGTGTCTTTCT...CTTTGTAATGTTACACATCTCGTGAAAACTCAGAAATGACAATAAAGCGTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265968.9
ENST00000533783.2
3UTR-3UTR CCA 90 bp CACGCTTTATTGTCATTTCTGAGTTTTCACGAGATGTGTAACATTACAAAGCCCAAAGGAGAGGCTATTTaGGGAAAGGTATCGATCTGT +
Preference number: 2 (lower is better)
Translates to: HALLSFLSFHEMCNITKPKGEAI*GKVSIC
Trigger: ACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTT...GGGCTTTGTAATGTTACACATCTCGTGAAAACTCAGAAATGACAATAAAGCGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265968.9
ENST00000533783.2
3UTR-3UTR TCA 90 bp TGCCACGCTTTATTGTCATTTCTGAGTTTTCACGAGATGTGTAACATTACAAAGCATTCAGTAAAGACCTaGTCACTTCTGAGGAGAAAC +
Preference number: 2 (lower is better)
Translates to: CHALLSFLSFHEMCNITKHSVKT*SLLRRN
Trigger: GTTTCTCCTCAGAAGTGATCAGGTCTTTACTGAATG...CTTTGTAATGTTACACATCTCGTGAAAACTCAGAAATGACAATAAAGCGTGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265968.9
ENST00000533783.2
3UTR-3UTR CAA 90 bp GACACTTGGCTGACAGATTCTGAAAGACTGCTTTCCTTTGCGCATTGTTTCTTCTCTGTGCAGGATTACTaGGCAAGTGTTTTAGGCTCG +
Preference number: 3 (lower is better)
Translates to: DTWLTDSERLLSFAHCFFSVQDY*ASVLGS
Trigger: CGAGCCTAAAACACTTGCCAAGTAATCCTGCACAGA...GAAGAAACAATGCGCAAAGGAAAGCAGTCTTTCAGAATCTGTCAGCCAAGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000648719.1
3UTR-3UTR CAA 90 bp AAAGACACTTGGCTGACAGATTCTGAAAGACTGCTTTCCTTTGCGCATTGTTTCTTTCTTTTCCACTTGTaGTGTAAGGCCTCCAAACCC +
Preference number: 3 (lower is better)
Translates to: KDTWLTDSERLLSFAHCFFLFHL*CKASKP
Trigger: GGGTTTGGAGGCCTTACACAACAAGTGGAAAAGAAA...GAAACAATGCGCAAAGGAAAGCAGTCTTTCAGAATCTGTCAGCCAAGTGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648719.1
3UTR CCA 72 bp AAACACATAATGTACGACTACAAAGGAGAGGCTATTTaGGGAAAGGTATCGATCTGTGCAGGATTACTTGGC +
Preference number: 3 (lower is better)
Translates to: KHIMYDYKGEAI*GKVSICAGLLG
Trigger: GCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
3UTR TCA 72 bp AATACAGAGGCAAATGCCACGCTTTATTGTCATTTCTaGGTTTTCACGAGATGTGTAACATTACAAAGCCCC +
Preference number: 3 (lower is better)
Translates to: NTEANATLYCHF*VFTRCVTLQSP
Trigger: GGGGCTTTGTAATGTTACACATCTCGTGAAAACTCAGAAATGACAATAAAGCGTGGCATTTGCCTCTGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265968.9
ENST00000533783.2
CDS-3UTR TCA 90 bp GTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTCGCCCGTGTCTGTGCTaGGACAGCCAGCGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: VRLQRRGYLGKGIDLCRIRPCLC*DSQRLV
Trigger: GACAAGGCGCTGGCTGTCTCAGCACAGACACGGGCG...AATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000649235.1
CDS-3UTR TCA 90 bp ACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCACGCCCGTGTCTGTGCTaGGACAGCCAGCGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: TKERLFGERYRSVQDYLARPCLC*DSQRLV
Trigger: GACAAGGCGCTGGCTGTCTCAGCACAGACACGGGCG...TGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000649235.1
CDS-3UTR TCA 90 bp ACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACCGCCCGTGTCTGTGCTaGGACAGCCAGCGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: TTTKERLFGERYRSVQDYRPCLC*DSQRLV
Trigger: GACAAGGCGCTGGCTGTCTCAGCACAGACACGGGCG...GTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000649235.1
CDS-3UTR TCA 90 bp GAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGTGTTTTCGCCCGTGTCTGTGCTaGGACAGCCAGCGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: EAIWGKVSICAGLLGKCFRPCLC*DSQRLV
Trigger: GACAAGGCGCTGGCTGTCTCAGCACAGACACGGGCG...AAAACACTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
CDS-3UTR GCA 90 bp AAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGGGGGACTGTTGGAACTaGAGGCCGAGATGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: KGEAIWGKVSICAGLLGKGDCWN*RPRCSP
Trigger: GGGCGAGCATCTCGGCCTGCAGTTCCAACAGTCCCC...CTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
CDS-3UTR TCA 90 bp ACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACGTTGCTGGTGGTAACTaGGCGTGCCGGCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: TTTKERLFGERYRSVQDYVAGGN*ACRLWG
Trigger: TCCCCAAAGCCGGCACGCTCAGTTACCACCAGCAAC...GTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
ENST00000649842.1
CDS-3UTR TCA 90 bp AAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGTGTTGCTGGTGGTAACTaGGCGTGCCGGCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: KERLFGERYRSVQDYLASVAGGN*ACRLWG
Trigger: TCCCCAAAGCCGGCACGCTCAGTTACCACCAGCAAC...ACTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
ENST00000649842.1
CDS-3UTR TCA 90 bp TGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATGTTGCTGGTGGTAACTaGGCGTGCCGGCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: CTTTKERLFGERYRSVQDVAGGN*ACRLWG
Trigger: TCCCCAAAGCCGGCACGCTCAGTTACCACCAGCAAC...ATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
ENST00000649842.1
CDS-3UTR GCA 90 bp TACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCGAGCCGCGACTGTCGTaGTGTCAAGAGCCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: YKGEAIWGKVSICAGLLGEPRLS*CQEPSC
Trigger: GCAGGAAGGCTCTTGACAGCACGACAGTCGCGGCTC...GCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000649235.1
CDS-3UTR GCA 90 bp CGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTGAGCCGCGACTGTCGTaGTGTCAAGAGCCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: RLQRRGYLGKGIDLCRITEPRLS*CQEPSC
Trigger: GCAGGAAGGCTCTTGACAGCACGACAGTCGCGGCTC...AGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000649235.1
CDS-3UTR GCA 90 bp CTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGAACTGCAGGCCGAGATaGTCGCCCGTGTCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: LQRRGYLGKGIDLCRITWNCRPR*SPVSVL
Trigger: CAGCACAGACACGGGCGAGCATCTCGGCCTGCAGTT...CCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000649235.1
CDS-3UTR GCA 90 bp AATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGAACTGCAGGCCGAGATaGTCGCCCGTGTCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: NVRLQRRGYLGKGIDLCRNCRPR*SPVSVL
Trigger: CAGCACAGACACGGGCGAGCATCTCGGCCTGCAGTT...CCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000649235.1
CDS-3UTR GCA 90 bp GGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGTGTCGGAAACAGGTCTTGTaGCAAGGCTTGCCACCTCCC +
Preference number: 4 (lower is better)
Translates to: GEAIWGKVSICAGLLGKCRKQVL*QGLPPP
Trigger: GGGAGGTGGCAAGCCTTGGCACAAGACCTGTTTCCG...ACACTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
ENST00000649842.1
CDS-3UTR GCA 90 bp AAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGTCCAAGGTGTTGGAACTaGAGGCCGAGATGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: KERLFGERYRSVQDYLASPRCWN*RPRCSP
Trigger: GGGCGAGCATCTCGGCCTGCAGTTCCAACACCTTGG...ACTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647990.1
CDS-3UTR TCA 90 bp GACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGTTGCTGGTGGTAACTaGGCGTGCCGGCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: DYKGEAIWGKVSICAGLLVAGGN*ACRLWG
Trigger: TCCCCAAAGCCGGCACGCTCAGTTACCACCAGCAAC...AAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
ENST00000649842.1
CDS-3UTR TCA 90 bp TGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATAGGAGACCAAGCCCCTaGGGGCAGGAACCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: CTTTKERLFGERYRSVQDRRPSP*GQEPSQ
Trigger: TTGAGAAGGTTCCTGCCCTCAGGGGCTTGGTCTCCT...ATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649235.1
CDS-3UTR GCA 90 bp ATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGAACAGGCTCCACATTTTaGGCCTCCGCCCCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: MYDYKGEAIWGKVSICAGTGSTF*ASAPVW
Trigger: CCAAACTGGGGCGGAGGCGCAAAATGTGGAGCCTGT...TCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR GCA 90 bp ACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAACAGGCTCCACATTTTaGGCCTCCGCCCCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: TKERLFGERYRSVQDYLATGSTF*ASAPVW
Trigger: CCAAACTGGGGCGGAGGCGCAAAATGTGGAGCCTGT...TGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR GCA 90 bp AATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGACAGGCTCCACATTTTaGGCCTCCGCCCCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: NVRLQRRGYLGKGIDLCRTGSTF*ASAPVW
Trigger: CCAAACTGGGGCGGAGGCGCAAAATGTGGAGCCTGT...CCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR GCA 90 bp AAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGCGGAAACAGGTCTTGTaGCAAGGCTTGCCACCTCCC +
Preference number: 4 (lower is better)
Translates to: KGEAIWGKVSICAGLLGKRKQVL*QGLPPP
Trigger: GGGAGGTGGCAAGCCTTGGCACAAGACCTGTTTCCG...CTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CCA 90 bp CTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGGGCTTTGGGGACTGTTaGAACTGCAGGCCGAGATGC +
Preference number: 4 (lower is better)
Translates to: LQRRGYLGKGIDLCRITWGFGDC*NCRPRC
Trigger: GCATCTCGGCCTGCAGTTCCAACAGTCCCCAAAGCC...CCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
CDS-3UTR CCA 90 bp AAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGTGGCTTTGGGGACTGTTaGAACTGCAGGCCGAGATGC +
Preference number: 4 (lower is better)
Translates to: KERLFGERYRSVQDYLASGFGDC*NCRPRC
Trigger: GCATCTCGGCCTGCAGTTCCAACAGTCCCCAAAGCC...ACTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
CDS-3UTR TCA 90 bp AAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGTCTCAGCAGCATAGACTaGCTTGCCACATCGAGGGCA +
Preference number: 4 (lower is better)
Translates to: KERLFGERYRSVQDYLASLSSID*LATSRA
Trigger: TGCCCTCGATGTGGCAAGTCAGTCTATGCTGCTGAG...ACTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
ENST00000649842.1
CDS-3UTR TCA 90 bp CTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCTCAGCAGCATAGACTaGCTTGCCACATCGAGGGCA +
Preference number: 4 (lower is better)
Translates to: LQRRGYLGKGIDLCRITWLSSID*LATSRA
Trigger: TGCCCTCGATGTGGCAAGTCAGTCTATGCTGCTGAG...CCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
ENST00000649842.1
CDS-3UTR GCA 90 bp AGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGTGTTTTAGAGCCGCGACTGTCGTaGTGTCAAGAGCCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: RLFGERYRSVQDYLASVLEPRLS*CQEPSC
Trigger: GCAGGAAGGCTCTTGACAGCACGACAGTCGCGGCTC...TAAAACACTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
CDS-3UTR GCA 90 bp CGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTCTTTGGGGCCATATCTaGGCCCATAGCACACCTTGC +
Preference number: 4 (lower is better)
Translates to: RLQRRGYLGKGIDLCRITLWGHI*AHSTPC
Trigger: GCAAGGTGTGCTATGGGCGCAGATATGGCCCCAAAG...AGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000649235.1
CDS-3UTR GCA 90 bp AAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGTCTTTGGGGCCATATCTaGGCCCATAGCACACCTTGC +
Preference number: 4 (lower is better)
Translates to: KERLFGERYRSVQDYLASLWGHI*AHSTPC
Trigger: GCAAGGTGTGCTATGGGCGCAGATATGGCCCCAAAG...ACTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000649235.1
CDS-3UTR GCA 90 bp TACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCCTTTGGGGCCATATCTaGGCCCATAGCACACCTTGC +
Preference number: 4 (lower is better)
Translates to: YKGEAIWGKVSICAGLLGLWGHI*AHSTPC
Trigger: GCAAGGTGTGCTATGGGCGCAGATATGGCCCCAAAG...GCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000649235.1
CDS-3UTR GCA 90 bp CTGATCACTTCTGAGGAGAAACACATAATGTACGACTACAAAGGAGAGGCTATTGGGGACTGTTGGAACTaGAGGCCGAGATGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: LITSEEKHIMYDYKGEAIGDCWN*RPRCSP
Trigger: GGGCGAGCATCTCGGCCTGCAGTTCCAACAGTCCCC...AATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTTCTCCTCAGAAGTGATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
CDS-3UTR GCA 90 bp CATAATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCCGGAAACAGGTCTTGTaGCAAGGCTTGCCACCTCCC +
Preference number: 4 (lower is better)
Translates to: HNVRLQRRGYLGKGIDLCRKQVL*QGLPPP
Trigger: GGGAGGTGGCAAGCCTTGGCACAAGACCTGTTTCCG...GCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
ENST00000649842.1
CDS-3UTR GCA 90 bp CGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTGCCGGCTTTGGGGACTaGAGTGGAAACACGTCTTGT +
Preference number: 4 (lower is better)
Translates to: RLQRRGYLGKGIDLCRITAGFGD*SGNTSC
Trigger: ACAAGACGTGTTTCCACTGCAGTCCCCAAAGCCGGC...AGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649842.1
CDS-3UTR CCA 90 bp CGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTCATACCCGATCCCTTTaGGGCCATATCTGCGCCCAT +
Preference number: 4 (lower is better)
Translates to: RLQRRGYLGKGIDLCRITHTRSL*GHICAH
Trigger: ATGGGCGCAGATATGGCCCCAAAGGGATCGGGTATG...AGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000649235.1
CDS-3UTR CCA 90 bp GGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGTGTTTTAGGCTCGCAAGGCTGTCACCAGCCTTaGCCTGAGAATATTCGTGTG +
Preference number: 4 (lower is better)
Translates to: GERYRSVQDYLASVLGSQGCHQP*PENIRV
Trigger: CACACGAATATTCTCAGGCCAAGGCTGGTGACAGCC...TTGCGAGCCTAAAACACTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533783.2
CDS-3UTR GCA 90 bp AAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGGGTCAAGGTCAAGTCTaGCTGTGTGGACTCCGTTCA +
Preference number: 4 (lower is better)
Translates to: KGEAIWGKVSICAGLLGKGQGQV*LCGLRS
Trigger: TGAACGGAGTCCACACAGGCAGACTTGACCTTGACC...CTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649842.1
CDS-3UTR GCA 90 bp AAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGTGGTCAAGGTCAAGTCTaGCTGTGTGGACTCCGTTCA +
Preference number: 4 (lower is better)
Translates to: KERLFGERYRSVQDYLASGQGQV*LCGLRS
Trigger: TGAACGGAGTCCACACAGGCAGACTTGACCTTGACC...ACTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649842.1
CDS-3UTR GCA 90 bp ATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGAGGTCAAGGTCAAGTCTaGCTGTGTGGACTCCGTTCA +
Preference number: 4 (lower is better)
Translates to: MYDYKGEAIWGKVSICAGGQGQV*LCGLRS
Trigger: TGAACGGAGTCCACACAGGCAGACTTGACCTTGACC...TCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649842.1
CDS-3UTR GCA 90 bp AGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGTGTTTTAACAGGCTCCACATTTTaGGCCTCCGCCCCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: RLFGERYRSVQDYLASVLTGSTF*ASAPVW
Trigger: CCAAACTGGGGCGGAGGCGCAAAATGTGGAGCCTGT...TAAAACACTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000648719.1
ENST00000649235.1
CDS-3UTR GCA 90 bp ACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCACCTTCCTGCAGGCCATaGAGTGGAAACACGTCTTGT +
Preference number: 4 (lower is better)
Translates to: TKERLFGERYRSVQDYLAPSCRP*SGNTSC
Trigger: ACAAGACGTGTTTCCACTGCATGGCCTGCAGGAAGG...TGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000649235.1
CDS-3UTR GCA 90 bp GTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTTGTCAAGAGCCTTCCTaGAGGCCATGCAGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: VRLQRRGYLGKGIDLCRICQEPS*RPCSGN
Trigger: GTTTCCACTGCATGGCCTGCAGGAAGGCTCTTGACA...AATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000649235.1
CDS-3UTR GCA 90 bp CGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGTCAAGAGCCTTCCTaGAGGCCATGCAGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: RLQRRGYLGKGIDLCRITCQEPS*RPCSGN
Trigger: GTTTCCACTGCATGGCCTGCAGGAAGGCTCTTGACA...AGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000649235.1
CDS-3UTR GCA 90 bp GGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGTGTGCCCATAGCACACCTTaGAGTAGATCTCCGACTCAT +
Preference number: 4 (lower is better)
Translates to: GEAIWGKVSICAGLLGKCAHSTP*SRSPTH
Trigger: ATGAGTCGGAGATCTACTGCAAGGTGTGCTATGGGC...ACACTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000649235.1
CDS-3UTR GCA 90 bp CTGATCACTTCTGAGGAGAAACACATAATGTACGACTACAAAGGAGAGGCTATTAACTGCAGGCCGAGATaGTCGCCCGTGTCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: LITSEEKHIMYDYKGEAINCRPR*SPVSVL
Trigger: CAGCACAGACACGGGCGAGCATCTCGGCCTGCAGTT...AATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTTCTCCTCAGAAGTGATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000649235.1
CDS-3UTR CCA 90 bp GGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGTGTCTGCAGGCCATGCAGTaGAAACACGTCTTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: GEAIWGKVSICAGLLGKCLQAMQ*KHVLWK
Trigger: TTTCCACAAGACGTGTTTCCACTGCATGGCCTGCAG...ACACTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000649235.1
CDS-3UTR CCA 90 bp TACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACATACCCGATCCCTTTaGGGCCATATCTGCGCCCAT +
Preference number: 4 (lower is better)
Translates to: YDYKGEAIWGKVSICAGLHTRSL*GHICAH
Trigger: ATGGGCGCAGATATGGCCCCAAAGGGATCGGGTATG...TAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000649235.1
CDS-3UTR CCA 90 bp CATAATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCCATACCCGATCCCTTTaGGGCCATATCTGCGCCCAT +
Preference number: 4 (lower is better)
Translates to: HNVRLQRRGYLGKGIDLCHTRSL*GHICAH
Trigger: ATGGGCGCAGATATGGCCCCAAAGGGATCGGGTATG...GCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000649235.1
CDS-3UTR CCA 90 bp TCTGAGGAGAAACACATAATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGGCTTTGGGGACTGTTaGAACTGCAGGCCGAGATGC +
Preference number: 4 (lower is better)
Translates to: SEEKHIMYDYKGEAIWGKGFGDC*NCRPRC
Trigger: GCATCTCGGCCTGCAGTTCCAACAGTCCCCAAAGCC...CTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTTCTCCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
CDS-3UTR CCA 90 bp CATAATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCCTTGTGCCAAGGTGTTaGAACTGCAGGCCGAGATGC +
Preference number: 4 (lower is better)
Translates to: HNVRLQRRGYLGKGIDLCLVPRC*NCRPRC
Trigger: GCATCTCGGCCTGCAGTTCCAACACCTTGGCACAAG...GCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647990.1
CDS-3UTR TCA 90 bp TCTGAGGAGAAACACATAATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGCTCAGCAGCATAGACTaGCTTGCCACATCGAGGGCA +
Preference number: 4 (lower is better)
Translates to: SEEKHIMYDYKGEAIWGKLSSID*LATSRA
Trigger: TGCCCTCGATGTGGCAAGTCAGTCTATGCTGCTGAG...CTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTTCTCCTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
ENST00000649842.1
CDS-3UTR TCA 90 bp AATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGCCCCATCTTTGTCAGTaGCATTTGTGGACTCCAGAC +
Preference number: 4 (lower is better)
Translates to: NVRLQRRGYLGKGIDLCRPHLCQ*HLWTPD
Trigger: GTCTGGAGTCCACAAATGTCACTGACAAAGATGGGG...CCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR TCA 90 bp ACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACCCCCATCTTTGTCAGTaGCATTTGTGGACTCCAGAC +
Preference number: 4 (lower is better)
Translates to: TTTKERLFGERYRSVQDYPHLCQ*HLWTPD
Trigger: GTCTGGAGTCCACAAATGTCACTGACAAAGATGGGG...GTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR TCA 90 bp AAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGCCCCATCTTTGTCAGTaGCATTTGTGGACTCCAGAC +
Preference number: 4 (lower is better)
Translates to: KGEAIWGKVSICAGLLGKPHLCQ*HLWTPD
Trigger: GTCTGGAGTCCACAAATGTCACTGACAAAGATGGGG...CTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR TCA 90 bp GACACTTGGCTGACAGATTCTGAAAGACTGCTTTCCTTTGCGCATTGTTTCTTCTCACCAGCCTTGGCCTaGGAATATTCGTGTGAGGCA +
Preference number: 4 (lower is better)
Translates to: DTWLTDSERLLSFAHCFFSPALA*EYSCEA
Trigger: TGCCTCACACGAATATTCTCAGGCCAAGGCTGGTGA...GAAGAAACAATGCGCAAAGGAAAGCAGTCTTTCAGAATCTGTCAGCCAAGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533783.2
CDS-3UTR GCA 90 bp GAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGTGTTTTGGTCAAGGTCAAGTCTaGCTGTGTGGACTCCGTTCA +
Preference number: 4 (lower is better)
Translates to: EAIWGKVSICAGLLGKCFGQGQV*LCGLRS
Trigger: TGAACGGAGTCCACACAGGCAGACTTGACCTTGACC...AAAACACTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000648719.1
CDS-3UTR GCA 90 bp TACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTAGGTCAAGGTCAAGTCTaGCTGTGTGGACTCCGTTCA +
Preference number: 4 (lower is better)
Translates to: YDYKGEAIWGKVSICAGLGQGQV*LCGLRS
Trigger: TGAACGGAGTCCACACAGGCAGACTTGACCTTGACC...TAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649842.1
CDS-3UTR GCA 90 bp GACACTTGGCTGACAGATTCTGAAAGACTGCTTTCCTTTGCGCATTGTTTCTTCCCTTCCTGCAGGCCATaGAGTGGAAACACGTCTTGT +
Preference number: 4 (lower is better)
Translates to: DTWLTDSERLLSFAHCFFPSCRP*SGNTSC
Trigger: ACAAGACGTGTTTCCACTGCATGGCCTGCAGGAAGG...GAAGAAACAATGCGCAAAGGAAAGCAGTCTTTCAGAATCTGTCAGCCAAGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
CDS-3UTR GCA 90 bp GACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTCCTTCCTGCAGGCCATaGAGTGGAAACACGTCTTGT +
Preference number: 4 (lower is better)
Translates to: DYKGEAIWGKVSICAGLLPSCRP*SGNTSC
Trigger: ACAAGACGTGTTTCCACTGCATGGCCTGCAGGAAGG...AAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000649235.1
CDS-3UTR GCA 90 bp ACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACGCCCATAGCACACCTTaGAGTAGATCTCCGACTCAT +
Preference number: 4 (lower is better)
Translates to: TTTKERLFGERYRSVQDYAHSTP*SRSPTH
Trigger: ATGAGTCGGAGATCTACTGCAAGGTGTGCTATGGGC...GTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000649235.1
CDS-3UTR GCA 90 bp TTATTGTCATTTCTGAGTTTTCACGAGATGTGTAACATTACAAAGCCCCACGATGGGGACTGTTGGAACTaGAGGCCGAGATGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: LLSFLSFHEMCNITKPHDGDCWN*RPRCSP
Trigger: GGGCGAGCATCTCGGCCTGCAGTTCCAACAGTCCCC...ATCGTGGGGCTTTGTAATGTTACACATCTCGTGAAAACTCAGAAATGACAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265968.9
ENST00000533783.2
CDS-3UTR GCA 90 bp GTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTCAGCATAGACTGACTTaGCACATCGAGGGCACTTCT +
Preference number: 4 (lower is better)
Translates to: VRLQRRGYLGKGIDLCRIQHRLT*HIEGTS
Trigger: AGAAGTGCCCTCGATGTGGCAAGTCAGTCTATGCTG...AATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
ENST00000649842.1
CDS-3UTR GCA 90 bp AAACACATAATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCCGGAAACAGGTCTTGTaGCAAGGCTTGCCACCTCCC +
Preference number: 4 (lower is better)
Translates to: KHIMYDYKGEAIWGKVSIRKQVL*QGLPPP
Trigger: GGGAGGTGGCAAGCCTTGGCACAAGACCTGTTTCCG...GATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
ENST00000649842.1
CDS-3UTR GCA 90 bp ACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCATCCAGTTGTTCCAACTaGCTGTGTGGACTCCGTTCA +
Preference number: 4 (lower is better)
Translates to: TKERLFGERYRSVQDYLASSCSN*LCGLRS
Trigger: TGAACGGAGTCCACACAGGCAGTTGGAACAACTGGA...TGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649235.1
CDS-3UTR CCA 90 bp TACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTAGCCTCCGCCCCAGTTTaGCATCTTGAAGACTATCTG +
Preference number: 4 (lower is better)
Translates to: YDYKGEAIWGKVSICAGLASAPV*HLEDYL
Trigger: CAGATAGTCTTCAAGATGCCAAACTGGGGCGGAGGC...TAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CCA 90 bp CTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCTGCAGGCCATGCAGTaGAAACACGTCTTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: LQRRGYLGKGIDLCRITWLQAMQ*KHVLWK
Trigger: TTTCCACAAGACGTGTTTCCACTGCATGGCCTGCAG...CCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000649235.1
CDS-3UTR CCA 90 bp ACTTCTGAGGAGAAACACATAATGTACGACTACAAAGGAGAGGCTATTTGGGGACATACCCGATCCCTTTaGGGCCATATCTGCGCCCAT +
Preference number: 4 (lower is better)
Translates to: TSEEKHIMYDYKGEAIWGHTRSL*GHICAH
Trigger: ATGGGCGCAGATATGGCCCCAAAGGGATCGGGTATG...TCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTTCTCCTCAGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000649235.1
CDS-3UTR TCA 90 bp AAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGTCCCAGTTTGGCATCTTaGAGACTATCTGGTCAAGGT +
Preference number: 4 (lower is better)
Translates to: KERLFGERYRSVQDYLASPSLAS*RLSGQG
Trigger: ACCTTGACCAGATAGTCTTCAAGATGCCAAACTGGG...ACTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR TCA 90 bp GTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTCCCAGTTTGGCATCTTaGAGACTATCTGGTCAAGGT +
Preference number: 4 (lower is better)
Translates to: VRLQRRGYLGKGIDLCRIPSLAS*RLSGQG
Trigger: ACCTTGACCAGATAGTCTTCAAGATGCCAAACTGGG...AATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR TCA 90 bp CTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCCCAGTTTGGCATCTTaGAGACTATCTGGTCAAGGT +
Preference number: 4 (lower is better)
Translates to: LQRRGYLGKGIDLCRITWPSLAS*RLSGQG
Trigger: ACCTTGACCAGATAGTCTTCAAGATGCCAAACTGGG...CCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR TCA 90 bp GACACTTGGCTGACAGATTCTGAAAGACTGCTTTCCTTTGCGCATTGTTTCTTCCCCCATCTTTGTCAGTaGCATTTGTGGACTCCAGAC +
Preference number: 4 (lower is better)
Translates to: DTWLTDSERLLSFAHCFFPHLCQ*HLWTPD
Trigger: GTCTGGAGTCCACAAATGTCACTGACAAAGATGGGG...GAAGAAACAATGCGCAAAGGAAAGCAGTCTTTCAGAATCTGTCAGCCAAGTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
CDS-3UTR TCA 90 bp GGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGTGTTTTAGGCTCGCAATTGGCTGACAGATTCTaGAAGACTGCTTTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: GERYRSVQDYLASVLGSQLADRF*KTAFLC
Trigger: GCAAAGGAAAGCAGTCTTTCAGAATCTGTCAGCCAA...TTGCGAGCCTAAAACACTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000648719.1
CDS-3UTR GCA 90 bp GGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGTGTGCACTGGATTTCTTCTaGATGGTAGACGGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: GEAIWGKVSICAGLLGKCALDFF*MVDGLF
Trigger: GAAAAGACCGTCTACCATGCAGAAGAAATCCAGTGC...ACACTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR GCA 90 bp AGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGTGTTTTATGTCAAGAGCCTTCCTaGAGGCCATGCAGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: RLFGERYRSVQDYLASVLCQEPS*RPCSGN
Trigger: GTTTCCACTGCATGGCCTGCAGGAAGGCTCTTGACA...TAAAACACTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
CDS-3UTR GCA 90 bp ACTTCTGAGGAGAAACACATAATGTACGACTACAAAGGAGAGGCTATTTGGGGATGTCAAGAGCCTTCCTaGAGGCCATGCAGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: TSEEKHIMYDYKGEAIWGCQEPS*RPCSGN
Trigger: GTTTCCACTGCATGGCCTGCAGGAAGGCTCTTGACA...TCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTTCTCCTCAGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000649235.1
CDS-3UTR GCA 90 bp CTGATCACTTCTGAGGAGAAACACATAATGTACGACTACAAAGGAGAGGCTATTCTTTGGGGCCATATCTaGGCCCATAGCACACCTTGC +
Preference number: 4 (lower is better)
Translates to: LITSEEKHIMYDYKGEAILWGHI*AHSTPC
Trigger: GCAAGGTGTGCTATGGGCGCAGATATGGCCCCAAAG...AATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTTCTCCTCAGAAGTGATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000649235.1
CDS-3UTR GCA 90 bp TGCCACGCTTTATTGTCATTTCTGAGTTTTCACGAGATGTGTAACATTACAAAGAACTGCAGGCCGAGATaGTCGCCCGTGTCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: CHALLSFLSFHEMCNITKNCRPR*SPVSVL
Trigger: CAGCACAGACACGGGCGAGCATCTCGGCCTGCAGTT...CTTTGTAATGTTACACATCTCGTGAAAACTCAGAAATGACAATAAAGCGTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265968.9
ENST00000533783.2
CDS-3UTR GCA 90 bp GACACTTGGCTGACAGATTCTGAAAGACTGCTTTCCTTTGCGCATTGTTTCTTCCAGCATAGACTGACTTaGCACATCGAGGGCACTTCT +
Preference number: 4 (lower is better)
Translates to: DTWLTDSERLLSFAHCFFQHRLT*HIEGTS
Trigger: AGAAGTGCCCTCGATGTGGCAAGTCAGTCTATGCTG...GAAGAAACAATGCGCAAAGGAAAGCAGTCTTTCAGAATCTGTCAGCCAAGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265968.9
ENST00000533783.2
CDS-3UTR CCA 90 bp GACACTTGGCTGACAGATTCTGAAAGACTGCTTTCCTTTGCGCATTGTTTCTTCCTGCAGGCCATGCAGTaGAAACACGTCTTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: DTWLTDSERLLSFAHCFFLQAMQ*KHVLWK
Trigger: TTTCCACAAGACGTGTTTCCACTGCATGGCCTGCAG...GAAGAAACAATGCGCAAAGGAAAGCAGTCTTTCAGAATCTGTCAGCCAAGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
CDS-3UTR CCA 90 bp GCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGTGTTTTAGGCTGCAGGCCATGCAGTaGAAACACGTCTTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: AIWGKVSICAGLLGKCFRLQAMQ*KHVLWK
Trigger: TTTCCACAAGACGTGTTTCCACTGCATGGCCTGCAG...CCTAAAACACTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
CDS-3UTR CCA 90 bp GTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTCTTTGGGGACTGCAGTaGAAACACGTCTTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: VRLQRRGYLGKGIDLCRILWGLQ*KHVLWK
Trigger: TTTCCACAAGACGTGTTTCCACTGCAGTCCCCAAAG...AATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649842.1
CDS-3UTR TCA 90 bp CATAATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCCCCAGTTTGGCATCTTaGAGACTATCTGGTCAAGGT +
Preference number: 4 (lower is better)
Translates to: HNVRLQRRGYLGKGIDLCPSLAS*RLSGQG
Trigger: ACCTTGACCAGATAGTCTTCAAGATGCCAAACTGGG...GCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR TCA 90 bp CACGCTTTATTGTCATTTCTGAGTTTTCACGAGATGTGTAACATTACAAAGCCCCTCAGCAGCATAGACTaGCTTGCCACATCGAGGGCA +
Preference number: 4 (lower is better)
Translates to: HALLSFLSFHEMCNITKPLSSID*LATSRA
Trigger: TGCCCTCGATGTGGCAAGTCAGTCTATGCTGCTGAG...GGGCTTTGTAATGTTACACATCTCGTGAAAACTCAGAAATGACAATAAAGCGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265968.9
ENST00000533783.2
CDS-3UTR TCA 90 bp ACTTCTGAGGAGAAACACATAATGTACGACTACAAAGGAGAGGCTATTTGGGGACCCCATCTTTGTCAGTaGCATTTGTGGACTCCAGAC +
Preference number: 4 (lower is better)
Translates to: TSEEKHIMYDYKGEAIWGPHLCQ*HLWTPD
Trigger: GTCTGGAGTCCACAAATGTCACTGACAAAGATGGGG...TCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTTCTCCTCAGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR TCA 90 bp GGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGTGTCATTCAGTAAAGACCTaGTCACTTCTGAGGAGAAAC +
Preference number: 4 (lower is better)
Translates to: GEAIWGKVSICAGLLGKCHSVKT*SLLRRN
Trigger: GTTTCTCCTCAGAAGTGATCAGGTCTTTACTGAATG...ACACTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR TCA 90 bp ACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCTGACAGATTCTaGAAGACTGCTTTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: TTTKERLFGERYRSVQDYLADRF*KTAFLC
Trigger: GCAAAGGAAAGCAGTCTTTCAGAATCTGTCAGCCAA...GTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
CDS-3UTR TCA 90 bp TGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTTGGCTGACAGATTCTaGAAGACTGCTTTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: CTTTKERLFGERYRSVQDLADRF*KTAFLC
Trigger: GCAAAGGAAAGCAGTCTTTCAGAATCTGTCAGCCAA...ATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
CDS-3UTR TCA 90 bp GTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTAGAAAGACACTTGGCTaGCAGATTCTGAAAGACTGC +
Preference number: 4 (lower is better)
Translates to: VRLQRRGYLGKGIDLCRIRKTLG*QILKDC
Trigger: GCAGTCTTTCAGAATCTGTCAGCCAAGTGTCTTTCT...AATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
CDS-3UTR TCA 90 bp TACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCGTCGCCAATTTGTATTaGTCCTTGCAGAAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: YKGEAIWGKVSICAGLLGVANLY*SLQKRR
Trigger: TCTCCTCTTCTGCAAGGATCAATACAAATTGGCGAC...GCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649235.1
CDS-3UTR GCA 90 bp TGCCACGCTTTATTGTCATTTCTGAGTTTTCACGAGATGTGTAACATTACAAAGACAGGCTCCACATTTTaGGCCTCCGCCCCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: CHALLSFLSFHEMCNITKTGSTF*ASAPVW
Trigger: CCAAACTGGGGCGGAGGCGCAAAATGTGGAGCCTGT...CTTTGTAATGTTACACATCTCGTGAAAACTCAGAAATGACAATAAAGCGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265968.9
ENST00000533783.2
CDS-3UTR GCA 90 bp ACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACGCACTGGATTTCTTCTaGATGGTAGACGGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: TTTKERLFGERYRSVQDYALDFF*MVDGLF
Trigger: GAAAAGACCGTCTACCATGCAGAAGAAATCCAGTGC...GTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR GCA 90 bp CTGATCACTTCTGAGGAGAAACACATAATGTACGACTACAAAGGAGAGGCTATTCCTTCCTGCAGGCCATaGAGTGGAAACACGTCTTGT +
Preference number: 4 (lower is better)
Translates to: LITSEEKHIMYDYKGEAIPSCRP*SGNTSC
Trigger: ACAAGACGTGTTTCCACTGCATGGCCTGCAGGAAGG...AATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTTCTCCTCAGAAGTGATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000649235.1
CDS-3UTR GCA 90 bp GGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGTGTAAAGGTATCGATCTGTaGAGGATTACTTGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: GEAIWGKVSICAGLLGKCKGIDL*RITWQV
Trigger: CACTTGCCAAGTAATCCTGCACAGATCGATACCTTT...ACACTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR GCA 90 bp GGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGTGTATTTGTATTGATCCTTaGAGAAGAGGAGACCAAGCC +
Preference number: 4 (lower is better)
Translates to: GEAIWGKVSICAGLLGKCICIDP*RRGDQA
Trigger: GGCTTGGTCTCCTCTTCTGCAAGGATCAATACAAAT...ACACTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649235.1
CDS-3UTR CCA 90 bp CGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGAAACACGTCTTGTaGAAACTCCTTCCATTGCAC +
Preference number: 4 (lower is better)
Translates to: RLQRRGYLGKGIDLCRITWKHVL*KLLPLH
Trigger: GTGCAATGGAAGGAGTTTCCACAAGACGTGTTTCCA...AGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CCA 90 bp ATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATGGAAACACGTCTTGTaGAAACTCCTTCCATTGCAC +
Preference number: 4 (lower is better)
Translates to: MYDYKGEAIWGKVSICAGWKHVL*KLLPLH
Trigger: GTGCAATGGAAGGAGTTTCCACAAGACGTGTTTCCA...TCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CCA 90 bp ACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTGGAAACACGTCTTGTaGAAACTCCTTCCATTGCAC +
Preference number: 4 (lower is better)
Translates to: TTTKERLFGERYRSVQDYWKHVL*KLLPLH
Trigger: GTGCAATGGAAGGAGTTTCCACAAGACGTGTTTCCA...GTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CCA 90 bp ATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGACAAACCCAATACCCGTaGGGCCAAAATTTTTGGCAT +
Preference number: 4 (lower is better)
Translates to: MYDYKGEAIWGKVSICAGQTQYP*GQNFWH
Trigger: ATGCCAAAAATTTTGGCCCCACGGGTATTGGGTTTG...TCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CCA 90 bp TACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCCAAACCCAATACCCGTaGGGCCAAAATTTTTGGCAT +
Preference number: 4 (lower is better)
Translates to: YKGEAIWGKVSICAGLLGQTQYP*GQNFWH
Trigger: ATGCCAAAAATTTTGGCCCCACGGGTATTGGGTTTG...GCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CCA 90 bp CTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAACCCAATACCCGTaGGGCCAAAATTTTTGGCAT +
Preference number: 4 (lower is better)
Translates to: LQRRGYLGKGIDLCRITWQTQYP*GQNFWH
Trigger: ATGCCAAAAATTTTGGCCCCACGGGTATTGGGTTTG...CCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CCA 90 bp GGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGTGTAAAGGAGAGGCTATTTaGGGAAAGGTATCGATCTGT +
Preference number: 4 (lower is better)
Translates to: GEAIWGKVSICAGLLGKCKGEAI*GKVSIC
Trigger: ACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTT...ACACTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CCA 90 bp GAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGTGTTTTTGTGCCAAGGTGCAGTaGAAACACGTCTTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: EAIWGKVSICAGLLGKCFCAKVQ*KHVLWK
Trigger: TTTCCACAAGACGTGTTTCCACTGCACCTTGGCACA...AAAACACTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648719.1
CDS-3UTR TCA 90 bp AAAGACACTTGGCTGACAGATTCTGAAAGACTGCTTTCCTTTGCGCATTGTTTCCCCAGTTTGGCATCTTaGAGACTATCTGGTCAAGGT +
Preference number: 4 (lower is better)
Translates to: KDTWLTDSERLLSFAHCFPSLAS*RLSGQG
Trigger: ACCTTGACCAGATAGTCTTCAAGATGCCAAACTGGG...GAAACAATGCGCAAAGGAAAGCAGTCTTTCAGAATCTGTCAGCCAAGTGTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
CDS-3UTR TCA 90 bp AAACACATAATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCCCCCATCTTTGTCAGTaGCATTTGTGGACTCCAGAC +
Preference number: 4 (lower is better)
Translates to: KHIMYDYKGEAIWGKVSIPHLCQ*HLWTPD
Trigger: GTCTGGAGTCCACAAATGTCACTGACAAAGATGGGG...GATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR TCA 90 bp CTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCATTCAGTAAAGACCTaGTCACTTCTGAGGAGAAAC +
Preference number: 4 (lower is better)
Translates to: LQRRGYLGKGIDLCRITWHSVKT*SLLRRN
Trigger: GTTTCTCCTCAGAAGTGATCAGGTCTTTACTGAATG...CCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR TCA 90 bp GACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTTTGGCTGACAGATTCTaGAAGACTGCTTTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: DYKGEAIWGKVSICAGLLLADRF*KTAFLC
Trigger: GCAAAGGAAAGCAGTCTTTCAGAATCTGTCAGCCAA...AAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
CDS-3UTR TCA 90 bp CATAATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGAAAGACACTTGGCTaGCAGATTCTGAAAGACTGC +
Preference number: 4 (lower is better)
Translates to: HNVRLQRRGYLGKGIDLCRKTLG*QILKDC
Trigger: GCAGTCTTTCAGAATCTGTCAGCCAAGTGTCTTTCT...GCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
CDS-3UTR GCA 90 bp TACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTAGCACTGGATTTCTTCTaGATGGTAGACGGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: YDYKGEAIWGKVSICAGLALDFF*MVDGLF
Trigger: GAAAAGACCGTCTACCATGCAGAAGAAATCCAGTGC...TAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR GCA 90 bp GACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGCACTGGATTTCTTCTaGATGGTAGACGGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: DYKGEAIWGKVSICAGLLALDFF*MVDGLF
Trigger: GAAAAGACCGTCTACCATGCAGAAGAAATCCAGTGC...AAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR GCA 90 bp GTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTGGAAACTCCTTCCATTaGACTGGATTTCTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: VRLQRRGYLGKGIDLCRIGNSFH*TGFLLH
Trigger: ATGCAGAAGAAATCCAGTGCAATGGAAGGAGTTTCC...AATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR GCA 90 bp CGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTGGAAACTCCTTCCATTaGACTGGATTTCTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: RLQRRGYLGKGIDLCRITGNSFH*TGFLLH
Trigger: ATGCAGAAGAAATCCAGTGCAATGGAAGGAGTTTCC...AGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR GCA 90 bp CTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGGGAAACTCCTTCCATTaGACTGGATTTCTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: LQRRGYLGKGIDLCRITWGNSFH*TGFLLH
Trigger: ATGCAGAAGAAATCCAGTGCAATGGAAGGAGTTTCC...CCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR GCA 90 bp CTGATCACTTCTGAGGAGAAACACATAATGTACGACTACAAAGGAGAGGCTATTCAGCATAGACTGACTTaGCACATCGAGGGCACTTCT +
Preference number: 4 (lower is better)
Translates to: LITSEEKHIMYDYKGEAIQHRLT*HIEGTS
Trigger: AGAAGTGCCCTCGATGTGGCAAGTCAGTCTATGCTG...AATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTTCTCCTCAGAAGTGATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
ENST00000649842.1
CDS-3UTR GCA 90 bp AAACACATAATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCCAGCATAGACTGACTTaGCACATCGAGGGCACTTCT +
Preference number: 4 (lower is better)
Translates to: KHIMYDYKGEAIWGKVSIQHRLT*HIEGTS
Trigger: AGAAGTGCCCTCGATGTGGCAAGTCAGTCTATGCTG...GATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
ENST00000649842.1
CDS-3UTR GCA 90 bp ACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACAAAGGTATCGATCTGTaGAGGATTACTTGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: TTTKERLFGERYRSVQDYKGIDL*RITWQV
Trigger: CACTTGCCAAGTAATCCTGCACAGATCGATACCTTT...GTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR GCA 90 bp AAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGAAAGGTATCGATCTGTaGAGGATTACTTGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: KGEAIWGKVSICAGLLGKKGIDL*RITWQV
Trigger: CACTTGCCAAGTAATCCTGCACAGATCGATACCTTT...CTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CCA 90 bp ACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAATCTTGAAGACTATCTaGTCAAGGTCAAGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: TKERLFGERYRSVQDYLAILKTI*SRSSLP
Trigger: AGGCAGACTTGACCTTGACCAGATAGTCTTCAAGAT...TGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649842.1
CDS-3UTR CCA 90 bp ACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACATCTTGAAGACTATCTaGTCAAGGTCAAGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: TTTKERLFGERYRSVQDYILKTI*SRSSLP
Trigger: AGGCAGACTTGACCTTGACCAGATAGTCTTCAAGAT...GTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649842.1
CDS-3UTR CCA 90 bp GAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGTGTTTTTGGAAACACGTCTTGTaGAAACTCCTTCCATTGCAC +
Preference number: 4 (lower is better)
Translates to: EAIWGKVSICAGLLGKCFWKHVL*KLLPLH
Trigger: GTGCAATGGAAGGAGTTTCCACAAGACGTGTTTCCA...AAAACACTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000648719.1
ENST00000649235.1
CDS-3UTR CCA 90 bp TACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAAGGAGAGGCTATTTaGGGAAAGGTATCGATCTGT +
Preference number: 4 (lower is better)
Translates to: YKGEAIWGKVSICAGLLGKGEAI*GKVSIC
Trigger: ACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTT...GCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CCA 90 bp AAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGAAAGGAGAGGCTATTTaGGGAAAGGTATCGATCTGT +
Preference number: 4 (lower is better)
Translates to: KGEAIWGKVSICAGLLGKKGEAI*GKVSIC
Trigger: ACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTT...CTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR TCA 90 bp GCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGTGTTTTAGGCATTCAGTAAAGACCTaGTCACTTCTGAGGAGAAAC +
Preference number: 4 (lower is better)
Translates to: AIWGKVSICAGLLGKCFRHSVKT*SLLRRN
Trigger: GTTTCTCCTCAGAAGTGATCAGGTCTTTACTGAATG...CCTAAAACACTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000648719.1
ENST00000649235.1
CDS-3UTR TCA 90 bp TACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTATCCTCTTTAAATATATaGAGGCTGTCACCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: YDYKGEAIWGKVSICAGLSSLNI*RLSPAL
Trigger: CAAGGCTGGTGACAGCCTTCATATATTTAAAGAGGA...TAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533783.2
CDS-3UTR GCA 90 bp AAAGACACTTGGCTGACAGATTCTGAAAGACTGCTTTCCTTTGCGCATTGTTTCGCACTGGATTTCTTCTaGATGGTAGACGGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: KDTWLTDSERLLSFAHCFALDFF*MVDGLF
Trigger: GAAAAGACCGTCTACCATGCAGAAGAAATCCAGTGC...GAAACAATGCGCAAAGGAAAGCAGTCTTTCAGAATCTGTCAGCCAAGTGTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
CDS-3UTR GCA 90 bp CATAATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCGGAAACTCCTTCCATTaGACTGGATTTCTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: HNVRLQRRGYLGKGIDLCGNSFH*TGFLLH
Trigger: ATGCAGAAGAAATCCAGTGCAATGGAAGGAGTTTCC...GCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR GCA 90 bp GGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGTGTTGGCATAGCAAACTTTaGAATAAAGTTCCCCATCTT +
Preference number: 4 (lower is better)
Translates to: GEAIWGKVSICAGLLGKCWHSKL*NKVPHL
Trigger: AAGATGGGGAACTTTATTGCAAAGTTTGCTATGCCA...ACACTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CCA 90 bp ACTTCTGAGGAGAAACACATAATGTACGACTACAAAGGAGAGGCTATTTGGGGATGGAAACACGTCTTGTaGAAACTCCTTCCATTGCAC +
Preference number: 4 (lower is better)
Translates to: TSEEKHIMYDYKGEAIWGWKHVL*KLLPLH
Trigger: GTGCAATGGAAGGAGTTTCCACAAGACGTGTTTCCA...TCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTTCTCCTCAGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CCA 90 bp AAAGACACTTGGCTGACAGATTCTGAAAGACTGCTTTCCTTTGCGCATTGTTTCCAAACCCAATACCCGTaGGGCCAAAATTTTTGGCAT +
Preference number: 4 (lower is better)
Translates to: KDTWLTDSERLLSFAHCFQTQYP*GQNFWH
Trigger: ATGCCAAAAATTTTGGCCCCACGGGTATTGGGTTTG...GAAACAATGCGCAAAGGAAAGCAGTCTTTCAGAATCTGTCAGCCAAGTGTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
CDS-3UTR CCA 90 bp ACTTCTGAGGAGAAACACATAATGTACGACTACAAAGGAGAGGCTATTTGGGGACAAACCCAATACCCGTaGGGCCAAAATTTTTGGCAT +
Preference number: 4 (lower is better)
Translates to: TSEEKHIMYDYKGEAIWGQTQYP*GQNFWH
Trigger: ATGCCAAAAATTTTGGCCCCACGGGTATTGGGTTTG...TCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTTCTCCTCAGAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CCA 90 bp GACACTTGGCTGACAGATTCTGAAAGACTGCTTTCCTTTGCGCATTGTTTCTTCAAAGGAGAGGCTATTTaGGGAAAGGTATCGATCTGT +
Preference number: 4 (lower is better)
Translates to: DTWLTDSERLLSFAHCFFKGEAI*GKVSIC
Trigger: ACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTT...GAAGAAACAATGCGCAAAGGAAAGCAGTCTTTCAGAATCTGTCAGCCAAGTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
CDS-3UTR CCA 90 bp CATAATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAAAGGAGAGGCTATTTaGGGAAAGGTATCGATCTGT +
Preference number: 4 (lower is better)
Translates to: HNVRLQRRGYLGKGIDLCKGEAI*GKVSIC
Trigger: ACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTT...GCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
3UTR CAA 72 bp GAAACACATAATGTACGACTACAAAGGAGAGGCTATTaGGGGAAAGGTATCGATCTGTGCAGGATTACTTGG +
Preference number: 4 (lower is better)
Translates to: ETHNVRLQRRGY*GKGIDLCRITW
Trigger: CCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR TCA 90 bp ACTTCTGAGGAGAAACACATAATGTACGACTACAAAGGAGAGGCTATTTGGGGACATTCAGTAAAGACCTaGTCACTTCTGAGGAGAAAC +
Preference number: 4 (lower is better)
Translates to: TSEEKHIMYDYKGEAIWGHSVKT*SLLRRN
Trigger: GTTTCTCCTCAGAAGTGATCAGGTCTTTACTGAATG...TCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTTCTCCTCAGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR TCA 90 bp AAACACATAATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCAGAAAGACACTTGGCTaGCAGATTCTGAAAGACTGC +
Preference number: 4 (lower is better)
Translates to: KHIMYDYKGEAIWGKVSIRKTLG*QILKDC
Trigger: GCAGTCTTTCAGAATCTGTCAGCCAAGTGTCTTTCT...GATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
CDS-3UTR TCA 90 bp GAAACACATAATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATAGAAAGACACTTGGCTaGCAGATTCTGAAAGACTGC +
Preference number: 4 (lower is better)
Translates to: ETHNVRLQRRGYLGKGIDRKTLG*QILKDC
Trigger: GCAGTCTTTCAGAATCTGTCAGCCAAGTGTCTTTCT...ATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
CDS-3UTR GCA 90 bp TGCCACGCTTTATTGTCATTTCTGAGTTTTCACGAGATGTGTAACATTACAAAGGCCCATAGCACACCTTaGAGTAGATCTCCGACTCAT +
Preference number: 4 (lower is better)
Translates to: CHALLSFLSFHEMCNITKAHSTP*SRSPTH
Trigger: ATGAGTCGGAGATCTACTGCAAGGTGTGCTATGGGC...CTTTGTAATGTTACACATCTCGTGAAAACTCAGAAATGACAATAAAGCGTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265968.9
ENST00000533783.2
CDS-3UTR GCA 90 bp AAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGTGGCATAGCAAACTTTaGAATAAAGTTCCCCATCTT +
Preference number: 4 (lower is better)
Translates to: KGEAIWGKVSICAGLLGKWHSKL*NKVPHL
Trigger: AAGATGGGGAACTTTATTGCAAAGTTTGCTATGCCA...CTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR GCA 90 bp TACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCTGGCATAGCAAACTTTaGAATAAAGTTCCCCATCTT +
Preference number: 4 (lower is better)
Translates to: YKGEAIWGKVSICAGLLGWHSKL*NKVPHL
Trigger: AAGATGGGGAACTTTATTGCAAAGTTTGCTATGCCA...GCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR GCA 90 bp TCTGAGGAGAAACACATAATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGAAAGGTATCGATCTGTaGAGGATTACTTGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: SEEKHIMYDYKGEAIWGKKGIDL*RITWQV
Trigger: CACTTGCCAAGTAATCCTGCACAGATCGATACCTTT...CTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTTCTCCTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CCA 90 bp AAAGACACTTGGCTGACAGATTCTGAAAGACTGCTTTCCTTTGCGCATTGTTTCATCTTGAAGACTATCTaGTCAAGGTCAAGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: KDTWLTDSERLLSFAHCFILKTI*SRSSLP
Trigger: AGGCAGACTTGACCTTGACCAGATAGTCTTCAAGAT...GAAACAATGCGCAAAGGAAAGCAGTCTTTCAGAATCTGTCAGCCAAGTGTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
CDS-3UTR CCA 90 bp CTGATCACTTCTGAGGAGAAACACATAATGTACGACTACAAAGGAGAGGCTATTCAAACCCAATACCCGTaGGGCCAAAATTTTTGGCAT +
Preference number: 4 (lower is better)
Translates to: LITSEEKHIMYDYKGEAIQTQYP*GQNFWH
Trigger: ATGCCAAAAATTTTGGCCCCACGGGTATTGGGTTTG...AATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTTCTCCTCAGAAGTGATCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CCA 90 bp CGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTATCTTGAAGACTATCTaGTCAAGGTCAAGTAGTTTG +
Preference number: 4 (lower is better)
Translates to: RLQRRGYLGKGIDLCRITILKTI*SRSSSL
Trigger: CAAACTACTTGACCTTGACCAGATAGTCTTCAAGAT...AGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649235.1
CDS-3UTR TCA 90 bp AAACACATAATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCCATTCAGTAAAGACCTaGTCACTTCTGAGGAGAAAC +
Preference number: 4 (lower is better)
Translates to: KHIMYDYKGEAIWGKVSIHSVKT*SLLRRN
Trigger: GTTTCTCCTCAGAAGTGATCAGGTCTTTACTGAATG...GATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CCA 90 bp CTGATCACTTCTGAGGAGAAACACATAATGTACGACTACAAAGGAGAGGCTATTAAAGGAGAGGCTATTTaGGGAAAGGTATCGATCTGT +
Preference number: 4 (lower is better)
Translates to: LITSEEKHIMYDYKGEAIKGEAI*GKVSIC
Trigger: ACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTT...AATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTTCTCCTCAGAAGTGATCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR GCA 90 bp TGCCACGCTTTATTGTCATTTCTGAGTTTTCACGAGATGTGTAACATTACAAAGGCACTGGATTTCTTCTaGATGGTAGACGGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: CHALLSFLSFHEMCNITKALDFF*MVDGLF
Trigger: GAAAAGACCGTCTACCATGCAGAAGAAATCCAGTGC...CTTTGTAATGTTACACATCTCGTGAAAACTCAGAAATGACAATAAAGCGTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265968.9
ENST00000533783.2
CDS-3UTR GCA 90 bp CACGCTTTATTGTCATTTCTGAGTTTTCACGAGATGTGTAACATTACAAAGCCCGGAAACTCCTTCCATTaGACTGGATTTCTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: HALLSFLSFHEMCNITKPGNSFH*TGFLLH
Trigger: ATGCAGAAGAAATCCAGTGCAATGGAAGGAGTTTCC...GGGCTTTGTAATGTTACACATCTCGTGAAAACTCAGAAATGACAATAAAGCGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265968.9
ENST00000533783.2
CDS-3UTR GCA 90 bp ACTTCTGAGGAGAAACACATAATGTACGACTACAAAGGAGAGGCTATTTGGGGATGGCATAGCAAACTTTaGAATAAAGTTCCCCATCTT +
Preference number: 4 (lower is better)
Translates to: TSEEKHIMYDYKGEAIWGWHSKL*NKVPHL
Trigger: AAGATGGGGAACTTTATTGCAAAGTTTGCTATGCCA...TCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTTCTCCTCAGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CCA 90 bp CACGCTTTATTGTCATTTCTGAGTTTTCACGAGATGTGTAACATTACAAAGCCCATCTTGAAGACTATCTaGTCAAGGTCAAGTCTGCCT +
Preference number: 4 (lower is better)
Translates to: HALLSFLSFHEMCNITKPILKTI*SRSSLP
Trigger: AGGCAGACTTGACCTTGACCAGATAGTCTTCAAGAT...GGGCTTTGTAATGTTACACATCTCGTGAAAACTCAGAAATGACAATAAAGCGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265968.9
ENST00000533783.2
CDS-3UTR TCA 90 bp TTATTGTCATTTCTGAGTTTTCACGAGATGTGTAACATTACAAAGCCCCACGATCATTCAGTAAAGACCTaGTCACTTCTGAGGAGAAAC +
Preference number: 4 (lower is better)
Translates to: LLSFLSFHEMCNITKPHDHSVKT*SLLRRN
Trigger: GTTTCTCCTCAGAAGTGATCAGGTCTTTACTGAATG...ATCGTGGGGCTTTGTAATGTTACACATCTCGTGAAAACTCAGAAATGACAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265968.9
ENST00000533783.2
CDS-3UTR GCA 90 bp TTATTGTCATTTCTGAGTTTTCACGAGATGTGTAACATTACAAAGCCCCACGATAAAGGTATCGATCTGTaGAGGATTACTTGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: LLSFLSFHEMCNITKPHDKGIDL*RITWQV
Trigger: CACTTGCCAAGTAATCCTGCACAGATCGATACCTTT...ATCGTGGGGCTTTGTAATGTTACACATCTCGTGAAAACTCAGAAATGACAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265968.9
ENST00000533783.2
CDS TCA 90 bp GGGACTGTTGGAACTGCAGGCCGAGATGCTCGCCCGTGTCTGTGCTaGGACAGCCAGCGCCTTGTCCATACCCGATCCCTTTGGGGCCAT +
Preference number: 5 (lower is better)
Translates to: GTVGTAGRDARPCLC*DSQRLVHTRSLWGH
Trigger: ATGGCCCCAAAGGGATCGGGTATGGACAAGGCGCTGGCTGTCTCAGCACAGACACGGGCGAGCATCTCGGCCTGCAGTTCCAACAGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
CDS TCA 90 bp CAAGGTGTTGGAACTGCAGGCCGAGATGCTCGCCCGTGTCTGTGCTaGGACAGCCAGCGCCTTGTCCATACCCGATCCCTTTGGGGCCAT +
Preference number: 5 (lower is better)
Translates to: QGVGTAGRDARPCLC*DSQRLVHTRSLWGH
Trigger: ATGGCCCCAAAGGGATCGGGTATGGACAAGGCGCTGGCTGTCTCAGCACAGACACGGGCGAGCATCTCGGCCTGCAGTTCCAACACCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647990.1
CDS GCA 90 bp GCGGAAACAGGTCTTGTGCCAAGGTGTTGGAACTGCAGGCCGAGATaGTCGCCCGTGTCTGTGCTGAGACAGCCAGCGCCTTGTCCATAC +
Preference number: 5 (lower is better)
Translates to: AETGLVPRCWNCRPR*SPVSVLRQPAPCPY
Trigger: GTATGGACAAGGCGCTGGCTGTCTCAGCACAGACACGGGCGAGCATCTCGGCCTGCAGTTCCAACACCTTGGCACAAGACCTGTTTCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647990.1
CDS GCA 90 bp CATACCCGATCCCTTTGGGGCCATATCTGCGCCCATAGCACACCTTaGAGTAGATCTCCGACTCATGAGCCGCGACTGTCGTGCTGTCAA +
Preference number: 5 (lower is better)
Translates to: HTRSLWGHICAHSTP*SRSPTHEPRLSCCQ
Trigger: TTGACAGCACGACAGTCGCGGCTCATGAGTCGGAGATCTACTGCAAGGTGTGCTATGGGCGCAGATATGGCCCCAAAGGGATCGGGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000649235.1
CDS TCA 90 bp TTTCACAGGCTCCACATTTTGCGCCTCCGCCCCAGTTTGGCATCTTaGAGACTATCTGGTCAAGGTCAAGTCTGCCTGTGTGGACTCCGT +
Preference number: 5 (lower is better)
Translates to: FHRLHILRLRPSLAS*RLSGQGQVCLCGLR
Trigger: ACGGAGTCCACACAGGCAGACTTGACCTTGACCAGATAGTCTTCAAGATGCCAAACTGGGGCGGAGGCGCAAAATGTGGAGCCTGTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649842.1
CDS-3UTR CAA 90 bp CTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCACAGGCTCCACATTTaGCGCCTCCGCCCCAGTTTG +
Preference number: 5 (lower is better)
Translates to: LQRRGYLGKGIDLCRITWHRLHI*RLRPSL
Trigger: CAAACTGGGGCGGAGGCGCAAAATGTGGAGCCTGTG...CCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CAA 90 bp TGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATCACAGGCTCCACATTTaGCGCCTCCGCCCCAGTTTG +
Preference number: 5 (lower is better)
Translates to: CTTTKERLFGERYRSVQDHRLHI*RLRPSL
Trigger: CAAACTGGGGCGGAGGCGCAAAATGTGGAGCCTGTG...ATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CAA 90 bp ACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCACGGCTTTGGGGACTGTaGGAACTGCAGGCCGAGATG +
Preference number: 5 (lower is better)
Translates to: TKERLFGERYRSVQDYLARLWGL*ELQAEM
Trigger: CATCTCGGCCTGCAGTTCCAACAGTCCCCAAAGCCG...TGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
CDS-3UTR CAA 90 bp AATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGCTGAGCGTGCCGGCTTaGGGGACTGTTGGAACTGCA +
Preference number: 5 (lower is better)
Translates to: NVRLQRRGYLGKGIDLCRLSVPA*GTVGTA
Trigger: TGCAGTTCCAACAGTCCCCAAAGCCGGCACGCTCAG...CCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
CDS-3UTR CAA 90 bp GACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTCACAGGCTCCACATTTaGCGCCTCCGCCCCAGTTTG +
Preference number: 5 (lower is better)
Translates to: DYKGEAIWGKVSICAGLLHRLHI*RLRPSL
Trigger: CAAACTGGGGCGGAGGCGCAAAATGTGGAGCCTGTG...AAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CAA 90 bp CATAATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCCCATACCCGATCCCTTaGGGGCCATATCTGCGCCCA +
Preference number: 5 (lower is better)
Translates to: HNVRLQRRGYLGKGIDLCPYPIP*GPYLRP
Trigger: TGGGCGCAGATATGGCCCCAAAGGGATCGGGTATGG...GCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000649235.1
CDS-3UTR CAA 90 bp AATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGGAGACAGCCAGCGCCTaGTCCATACCCGATCCCTTT +
Preference number: 5 (lower is better)
Translates to: NVRLQRRGYLGKGIDLCRETASA*SIPDPF
Trigger: AAAGGGATCGGGTATGGACAAGGCGCTGGCTGTCTC...CCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000649235.1
CDS-3UTR CAA 90 bp CGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTGAGACAGCCAGCGCCTaGTCCATACCCGATCCCTTT +
Preference number: 5 (lower is better)
Translates to: RLQRRGYLGKGIDLCRITETASA*SIPDPF
Trigger: AAAGGGATCGGGTATGGACAAGGCGCTGGCTGTCTC...AGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000649235.1
CDS-3UTR CAA 90 bp GACACTTGGCTGACAGATTCTGAAAGACTGCTTTCCTTTGCGCATTGTTTCTTCCTGAGCGTGCCGGCTTaGGGGACTGTTGGAACTGCA +
Preference number: 5 (lower is better)
Translates to: DTWLTDSERLLSFAHCFFLSVPA*GTVGTA
Trigger: TGCAGTTCCAACAGTCCCCAAAGCCGGCACGCTCAG...GAAGAAACAATGCGCAAAGGAAAGCAGTCTTTCAGAATCTGTCAGCCAAGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265968.9
ENST00000533783.2
CDS-3UTR CAA 90 bp TACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCCAGCGGAAACAGGTCTaGTGCCAAGGCTTGCCACCT +
Preference number: 5 (lower is better)
Translates to: YKGEAIWGKVSICAGLLGQRKQV*CQGLPP
Trigger: AGGTGGCAAGCCTTGGCACAAGACCTGTTTCCGCTG...GCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CAA 90 bp AAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGCAGCGGAAACAGGTCTaGTGCCAAGGCTTGCCACCT +
Preference number: 5 (lower is better)
Translates to: KGEAIWGKVSICAGLLGKQRKQV*CQGLPP
Trigger: AGGTGGCAAGCCTTGGCACAAGACCTGTTTCCGCTG...CTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CAA 90 bp GACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTCTGAGCGTGCCGGCTTaGGGGACTGCAGTGGAAACA +
Preference number: 5 (lower is better)
Translates to: DYKGEAIWGKVSICAGLLLSVPA*GTAVET
Trigger: TGTTTCCACTGCAGTCCCCAAAGCCGGCACGCTCAG...AAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649842.1
CDS-3UTR CAA 90 bp TGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATCCTCCCGCTTTCCAGTaGTTCCAACTGCCTGTGTGG +
Preference number: 5 (lower is better)
Translates to: CTTTKERLFGERYRSVQDPPAFQ*FQLPVW
Trigger: CCACACAGGCAGTTGGAACAACTGGAAAGCGGGAGG...ATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649235.1
CDS GCA 90 bp TGCAGGCCATGCAGTGGAAACACGTCTTGTGGAAACTCCTTCCATTaGACTGGATTTCTTCTGCATGGTAGACGGTCTTTTCACAGGCTC +
Preference number: 5 (lower is better)
Translates to: CRPCSGNTSCGNSFH*TGFLLHGRRSFHRL
Trigger: GAGCCTGTGAAAAGACCGTCTACCATGCAGAAGAAATCCAGTGCAATGGAAGGAGTTTCCACAAGACGTGTTTCCACTGCATGGCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000649235.1
CDS GCA 90 bp GTGCCAAGGTGCAGTGGAAACACGTCTTGTGGAAACTCCTTCCATTaGACTGGATTTCTTCTGCATGGTAGACGGTCTTTTCACAGGCTC +
Preference number: 5 (lower is better)
Translates to: VPRCSGNTSCGNSFH*TGFLLHGRRSFHRL
Trigger: GAGCCTGTGAAAAGACCGTCTACCATGCAGAAGAAATCCAGTGCAATGGAAGGAGTTTCCACAAGACGTGTTTCCACTGCACCTTGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648719.1
CDS-3UTR CAA 90 bp TCTGAGGAGAAACACATAATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGCACAGGCTCCACATTTaGCGCCTCCGCCCCAGTTTG +
Preference number: 5 (lower is better)
Translates to: SEEKHIMYDYKGEAIWGKHRLHI*RLRPSL
Trigger: CAAACTGGGGCGGAGGCGCAAAATGTGGAGCCTGTG...CTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTTCTCCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CAA 90 bp ACTTCTGAGGAGAAACACATAATGTACGACTACAAAGGAGAGGCTATTTGGGGACACAGGCTCCACATTTaGCGCCTCCGCCCCAGTTTG +
Preference number: 5 (lower is better)
Translates to: TSEEKHIMYDYKGEAIWGHRLHI*RLRPSL
Trigger: CAAACTGGGGCGGAGGCGCAAAATGTGGAGCCTGTG...TCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTTCTCCTCAGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CAA 90 bp ACTTCTGAGGAGAAACACATAATGTACGACTACAAAGGAGAGGCTATTTGGGGACCATACCCGATCCCTTaGGGGCCATATCTGCGCCCA +
Preference number: 5 (lower is better)
Translates to: TSEEKHIMYDYKGEAIWGPYPIP*GPYLRP
Trigger: TGGGCGCAGATATGGCCCCAAAGGGATCGGGTATGG...TCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTTCTCCTCAGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000649235.1
CDS-3UTR CAA 90 bp TACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTAGAGACAGCCAGCGCCTaGTCCATACCCGATCCCTTT +
Preference number: 5 (lower is better)
Translates to: YDYKGEAIWGKVSICAGLETASA*SIPDPF
Trigger: AAAGGGATCGGGTATGGACAAGGCGCTGGCTGTCTC...TAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000649235.1
CDS-3UTR CAA 90 bp GACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGAGACAGCCAGCGCCTaGTCCATACCCGATCCCTTT +
Preference number: 5 (lower is better)
Translates to: DYKGEAIWGKVSICAGLLETASA*SIPDPF
Trigger: AAAGGGATCGGGTATGGACAAGGCGCTGGCTGTCTC...AAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000649235.1
CDS-3UTR CAA 90 bp AATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGGTCTTGTGCCAAGGCTaGCCACCTCCCATAACCTTC +
Preference number: 5 (lower is better)
Translates to: NVRLQRRGYLGKGIDLCRVLCQG*PPPITF
Trigger: GAAGGTTATGGGAGGTGGCAAGCCTTGGCACAAGAC...CCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CAA 90 bp CATAATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCCAGCGGAAACAGGTCTaGTGCCAAGGCTTGCCACCT +
Preference number: 5 (lower is better)
Translates to: HNVRLQRRGYLGKGIDLCQRKQV*CQGLPP
Trigger: AGGTGGCAAGCCTTGGCACAAGACCTGTTTCCGCTG...GCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CAA 90 bp AAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGTTCTTGTGCCAAGGTGTaGGAACTGCAGGCCGAGATG +
Preference number: 5 (lower is better)
Translates to: KERLFGERYRSVQDYLASSCAKV*ELQAEM
Trigger: CATCTCGGCCTGCAGTTCCAACACCTTGGCACAAGA...ACTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647990.1
CDS GCA 90 bp GAAACACGTCTTGTGGAAACTCCTTCCATTGCACTGGATTTCTTCTaGATGGTAGACGGTCTTTTCACAGGCTCCACATTTTGCGCCTCC +
Preference number: 5 (lower is better)
Translates to: ETRLVETPSIALDFF*MVDGLFTGSTFCAS
Trigger: GGAGGCGCAAAATGTGGAGCCTGTGAAAAGACCGTCTACCATGCAGAAGAAATCCAGTGCAATGGAAGGAGTTTCCACAAGACGTGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS GCA 90 bp TTTGGGGACTGCAGTGGAAACACGTCTTGTGGAAACTCCTTCCATTaGACTGGATTTCTTCTGCATGGTAGACGGTCTTTTCACAGGCTC +
Preference number: 5 (lower is better)
Translates to: FGDCSGNTSCGNSFH*TGFLLHGRRSFHRL
Trigger: GAGCCTGTGAAAAGACCGTCTACCATGCAGAAGAAATCCAGTGCAATGGAAGGAGTTTCCACAAGACGTGTTTCCACTGCAGTCCCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649842.1
CDS-3UTR CAA 90 bp GGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGTGTTTTAGGCTCGCAACCCCAGTTTGGCATCTaGAAGACTATCTGGTCAAGG +
Preference number: 5 (lower is better)
Translates to: GERYRSVQDYLASVLGSQPQFGI*KTIWSR
Trigger: CCTTGACCAGATAGTCTTCAAGATGCCAAACTGGGG...TTGCGAGCCTAAAACACTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000648719.1
ENST00000649235.1
CDS-3UTR CAA 90 bp GAAACACATAATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCACAGGCTCCACATTTaGCGCCTCCGCCCCAGTTTG +
Preference number: 5 (lower is better)
Translates to: ETHNVRLQRRGYLGKGIDHRLHI*RLRPSL
Trigger: CAAACTGGGGCGGAGGCGCAAAATGTGGAGCCTGTG...ATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CAA 90 bp GAAACACATAATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCCATACCCGATCCCTTaGGGGCCATATCTGCGCCCA +
Preference number: 5 (lower is better)
Translates to: ETHNVRLQRRGYLGKGIDPYPIP*GPYLRP
Trigger: TGGGCGCAGATATGGCCCCAAAGGGATCGGGTATGG...ATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000649235.1
CDS-3UTR CAA 90 bp CTGATCACTTCTGAGGAGAAACACATAATGTACGACTACAAAGGAGAGGCTATTCGGCTTTGGGGACTGTaGGAACTGCAGGCCGAGATG +
Preference number: 5 (lower is better)
Translates to: LITSEEKHIMYDYKGEAIRLWGL*ELQAEM
Trigger: CATCTCGGCCTGCAGTTCCAACAGTCCCCAAAGCCG...AATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTTCTCCTCAGAAGTGATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
CDS-3UTR CAA 90 bp GAAACACATAATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCGGCTTTGGGGACTGTaGGAACTGCAGGCCGAGATG +
Preference number: 5 (lower is better)
Translates to: ETHNVRLQRRGYLGKGIDRLWGL*ELQAEM
Trigger: CATCTCGGCCTGCAGTTCCAACAGTCCCCAAAGCCG...ATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
CDS-3UTR CAA 90 bp GCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGTGTTTTAGGCAGCGGAAACAGGTCTaGTGCCAAGGTGCAGTGGAA +
Preference number: 5 (lower is better)
Translates to: AIWGKVSICAGLLGKCFRQRKQV*CQGAVE
Trigger: TTCCACTGCACCTTGGCACAAGACCTGTTTCCGCTG...CCTAAAACACTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648719.1
CDS-3UTR CAA 90 bp TGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATCCCCAGTTTGGCATCTaGAAGACTATCTGGTCAAGG +
Preference number: 5 (lower is better)
Translates to: CTTTKERLFGERYRSVQDPQFGI*KTIWSR
Trigger: CCTTGACCAGATAGTCTTCAAGATGCCAAACTGGGG...ATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CAA 90 bp ACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAGTGAATTTGGAAGGGTaGCTGGTGGTAACTGAGCGT +
Preference number: 5 (lower is better)
Translates to: TKERLFGERYRSVQDYLAVNLEG*LVVTER
Trigger: ACGCTCAGTTACCACCAGCAACCCTTCCAAATTCAC...TGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CAA 90 bp ACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACGTGAATTTGGAAGGGTaGCTGGTGGTAACTGAGCGT +
Preference number: 5 (lower is better)
Translates to: TTTKERLFGERYRSVQDYVNLEG*LVVTER
Trigger: ACGCTCAGTTACCACCAGCAACCCTTCCAAATTCAC...GTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CAA 90 bp GGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGTGTAACTTCGCAGTGAATTaGGAAGGGTTGCTGGTGGTA +
Preference number: 5 (lower is better)
Translates to: GEAIWGKVSICAGLLGKCNFAVN*EGLLVV
Trigger: TACCACCAGCAACCCTTCCAAATTCACTGCGAAGTT...ACACTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CAA 90 bp TCTGAGGAGAAACACATAATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTCTTGTGCCAAGGCTaGCCACCTCCCATAACCTTC +
Preference number: 5 (lower is better)
Translates to: SEEKHIMYDYKGEAIWGKVLCQG*PPPITF
Trigger: GAAGGTTATGGGAGGTGGCAAGCCTTGGCACAAGAC...CTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTTCTCCTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CAA 90 bp AAACACATAATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCCAGCGGAAACAGGTCTaGTGCCAAGGCTTGCCACCT +
Preference number: 5 (lower is better)
Translates to: KHIMYDYKGEAIWGKVSIQRKQV*CQGLPP
Trigger: AGGTGGCAAGCCTTGGCACAAGACCTGTTTCCGCTG...GATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CAA 90 bp GGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGTGTTTTAGGCTCGCAACAAAGGAGAGGCTATTaGGGGAAAGGTATCGATCTG +
Preference number: 5 (lower is better)
Translates to: GERYRSVQDYLASVLGSQQRRGY*GKGIDL
Trigger: CAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTG...TTGCGAGCCTAAAACACTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000648719.1
ENST00000649235.1
CDS-3UTR CAA 90 bp GCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGTGTTTTAGGCCCCAGTTTGGCATCTaGAAGACTATCTGGTCAAGG +
Preference number: 5 (lower is better)
Translates to: AIWGKVSICAGLLGKCFRPQFGI*KTIWSR
Trigger: CCTTGACCAGATAGTCTTCAAGATGCCAAACTGGGG...CCTAAAACACTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000648719.1
ENST00000649235.1
CDS-3UTR CAA 90 bp CATAATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCCCCCAGTTTGGCATCTaGAAGACTATCTGGTCAAGG +
Preference number: 5 (lower is better)
Translates to: HNVRLQRRGYLGKGIDLCPQFGI*KTIWSR
Trigger: CCTTGACCAGATAGTCTTCAAGATGCCAAACTGGGG...GCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CAA 90 bp TTATTGTCATTTCTGAGTTTTCACGAGATGTGTAACATTACAAAGCCCCACGATCTGAGCGTGCCGGCTTaGGGGACTGTTGGAACTGCA +
Preference number: 5 (lower is better)
Translates to: LLSFLSFHEMCNITKPHDLSVPA*GTVGTA
Trigger: TGCAGTTCCAACAGTCCCCAAAGCCGGCACGCTCAG...ATCGTGGGGCTTTGTAATGTTACACATCTCGTGAAAACTCAGAAATGACAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265968.9
ENST00000533783.2
CDS-3UTR CAA 90 bp ATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGAAACTTCGCAGTGAATTaGGAAGGGTTGCTGGTGGTA +
Preference number: 5 (lower is better)
Translates to: MYDYKGEAIWGKVSICAGNFAVN*EGLLVV
Trigger: TACCACCAGCAACCCTTCCAAATTCACTGCGAAGTT...TCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CAA 90 bp ACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACAACTTCGCAGTGAATTaGGAAGGGTTGCTGGTGGTA +
Preference number: 5 (lower is better)
Translates to: TTTKERLFGERYRSVQDYNFAVN*EGLLVV
Trigger: TACCACCAGCAACCCTTCCAAATTCACTGCGAAGTT...GTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CAA 90 bp CTGATCACTTCTGAGGAGAAACACATAATGTACGACTACAAAGGAGAGGCTATTGTCTTGTGCCAAGGCTaGCCACCTCCCATAACCTTC +
Preference number: 5 (lower is better)
Translates to: LITSEEKHIMYDYKGEAIVLCQG*PPPITF
Trigger: GAAGGTTATGGGAGGTGGCAAGCCTTGGCACAAGAC...AATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTTCTCCTCAGAAGTGATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CAA 90 bp GGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGTGTTTTAGGCTCGCAATTTCTTTTCCACTTGTaGTGTAAGGCCTCCAAACCC +
Preference number: 5 (lower is better)
Translates to: GERYRSVQDYLASVLGSQFLFHL*CKASKP
Trigger: GGGTTTGGAGGCCTTACACAACAAGTGGAAAAGAAA...TTGCGAGCCTAAAACACTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000648719.1
ENST00000649235.1
CDS-3UTR CAA 90 bp AAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGTCTGTGCAGGATTACTaGGCAAGTGTTTTAGGCTCG +
Preference number: 5 (lower is better)
Translates to: KGEAIWGKVSICAGLLGKSVQDY*ASVLGS
Trigger: CGAGCCTAAAACACTTGCCAAGTAATCCTGCACAGA...CTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CAA 90 bp CTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGTCTGTGCAGGATTACTaGGCAAGTGTTTTAGGCTCG +
Preference number: 5 (lower is better)
Translates to: LQRRGYLGKGIDLCRITWSVQDY*ASVLGS
Trigger: CGAGCCTAAAACACTTGCCAAGTAATCCTGCACAGA...CCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CAA 90 bp TACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCTCTGTGCAGGATTACTaGGCAAGTGTTTTAGGCTCG +
Preference number: 5 (lower is better)
Translates to: YKGEAIWGKVSICAGLLGSVQDY*ASVLGS
Trigger: CGAGCCTAAAACACTTGCCAAGTAATCCTGCACAGA...GCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CAA 90 bp ACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACCAAAGGAGAGGCTATTaGGGGAAAGGTATCGATCTG +
Preference number: 5 (lower is better)
Translates to: TTTKERLFGERYRSVQDYQRRGY*GKGIDL
Trigger: CAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTG...GTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CAA 90 bp ACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCACAAAGGAGAGGCTATTaGGGGAAAGGTATCGATCTG +
Preference number: 5 (lower is better)
Translates to: TKERLFGERYRSVQDYLAQRRGY*GKGIDL
Trigger: CAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTG...TGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CAA 90 bp ACTTCTGAGGAGAAACACATAATGTACGACTACAAAGGAGAGGCTATTTGGGGACCCCAGTTTGGCATCTaGAAGACTATCTGGTCAAGG +
Preference number: 5 (lower is better)
Translates to: TSEEKHIMYDYKGEAIWGPQFGI*KTIWSR
Trigger: CCTTGACCAGATAGTCTTCAAGATGCCAAACTGGGG...TCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTTCTCCTCAGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CAA 90 bp AAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGTGGAAACTCCTTCCATaGCACTGGATTTCTTCTGCA +
Preference number: 5 (lower is better)
Translates to: KGEAIWGKVSICAGLLGKWKLLP*HWISSA
Trigger: TGCAGAAGAAATCCAGTGCAATGGAAGGAGTTTCCA...CTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CAA 90 bp CGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGAAACTCCTTCCATaGCACTGGATTTCTTCTGCA +
Preference number: 5 (lower is better)
Translates to: RLQRRGYLGKGIDLCRITWKLLP*HWISSA
Trigger: TGCAGAAGAAATCCAGTGCAATGGAAGGAGTTTCCA...AGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CAA 90 bp ATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATGGAAACTCCTTCCATaGCACTGGATTTCTTCTGCA +
Preference number: 5 (lower is better)
Translates to: MYDYKGEAIWGKVSICAGWKLLP*HWISSA
Trigger: TGCAGAAGAAATCCAGTGCAATGGAAGGAGTTTCCA...TCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CAA 90 bp TCTGAGGAGAAACACATAATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTGAATTTGGAAGGGTaGCTGGTGGTAACTGAGCGT +
Preference number: 5 (lower is better)
Translates to: SEEKHIMYDYKGEAIWGKVNLEG*LVVTER
Trigger: ACGCTCAGTTACCACCAGCAACCCTTCCAAATTCAC...CTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTTCTCCTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CAA 90 bp GACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTAACTTCGCAGTGAATTaGGAAGGGTTGCTGGTGGTA +
Preference number: 5 (lower is better)
Translates to: DYKGEAIWGKVSICAGLLNFAVN*EGLLVV
Trigger: TACCACCAGCAACCCTTCCAAATTCACTGCGAAGTT...AAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CAA 90 bp ACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCATTTCTTTTCCACTTGTaGTGTAAGGCCTCCAAACCC +
Preference number: 5 (lower is better)
Translates to: TKERLFGERYRSVQDYLAFLFHL*CKASKP
Trigger: GGGTTTGGAGGCCTTACACAACAAGTGGAAAAGAAA...TGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CAA 90 bp CTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGTTTCTTTTCCACTTGTaGTGTAAGGCCTCCAAACCC +
Preference number: 5 (lower is better)
Translates to: LQRRGYLGKGIDLCRITWFLFHL*CKASKP
Trigger: GGGTTTGGAGGCCTTACACAACAAGTGGAAAAGAAA...CCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CAA 90 bp CATAATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCCAAAGGAGAGGCTATTaGGGGAAAGGTATCGATCTG +
Preference number: 5 (lower is better)
Translates to: HNVRLQRRGYLGKGIDLCQRRGY*GKGIDL
Trigger: CAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTG...GCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CAA 90 bp CATAATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCGCTTTCCTTTGCGCATaGTTTCTTCCTTCTCACTCC +
Preference number: 5 (lower is better)
Translates to: HNVRLQRRGYLGKGIDLCAFLCA*FLPSHS
Trigger: GGAGTGAGAAGGAAGAAACAATGCGCAAAGGAAAGC...GCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
CDS-3UTR CAA 90 bp TACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTAGCTTTCCTTTGCGCATaGTTTCTTCCTTCTCACTCC +
Preference number: 5 (lower is better)
Translates to: YDYKGEAIWGKVSICAGLAFLCA*FLPSHS
Trigger: GGAGTGAGAAGGAAGAAACAATGCGCAAAGGAAAGC...TAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
CDS-3UTR CAA 90 bp TACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTATGGAAACTCCTTCCATaGCACTGGATTTCTTCTGCA +
Preference number: 5 (lower is better)
Translates to: YDYKGEAIWGKVSICAGLWKLLP*HWISSA
Trigger: TGCAGAAGAAATCCAGTGCAATGGAAGGAGTTTCCA...TAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CAA 90 bp GACACTTGGCTGACAGATTCTGAAAGACTGCTTTCCTTTGCGCATTGTTTCTTCTGGAAACTCCTTCCATaGCACTGGATTTCTTCTGCA +
Preference number: 5 (lower is better)
Translates to: DTWLTDSERLLSFAHCFFWKLLP*HWISSA
Trigger: TGCAGAAGAAATCCAGTGCAATGGAAGGAGTTTCCA...GAAGAAACAATGCGCAAAGGAAAGCAGTCTTTCAGAATCTGTCAGCCAAGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
CDS-3UTR CAA 90 bp AAACACATAATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCGTGAATTTGGAAGGGTaGCTGGTGGTAACTGAGCGT +
Preference number: 5 (lower is better)
Translates to: KHIMYDYKGEAIWGKVSIVNLEG*LVVTER
Trigger: ACGCTCAGTTACCACCAGCAACCCTTCCAAATTCAC...GATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CAA 90 bp GAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGTGTTTTTTTCTTTTCCACTTGTaGTGTAAGGCCTCCAAACCC +
Preference number: 5 (lower is better)
Translates to: EAIWGKVSICAGLLGKCFFLFHL*CKASKP
Trigger: GGGTTTGGAGGCCTTACACAACAAGTGGAAAAGAAA...AAAACACTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTC
44% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000648719.1
ENST00000649235.1
CDS-3UTR CAA 90 bp ACTTCTGAGGAGAAACACATAATGTACGACTACAAAGGAGAGGCTATTTGGGGATCTGTGCAGGATTACTaGGCAAGTGTTTTAGGCTCG +
Preference number: 5 (lower is better)
Translates to: TSEEKHIMYDYKGEAIWGSVQDY*ASVLGS
Trigger: CGAGCCTAAAACACTTGCCAAGTAATCCTGCACAGA...TCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTTCTCCTCAGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CAA 90 bp ACTTCTGAGGAGAAACACATAATGTACGACTACAAAGGAGAGGCTATTTGGGGACAAAGGAGAGGCTATTaGGGGAAAGGTATCGATCTG +
Preference number: 5 (lower is better)
Translates to: TSEEKHIMYDYKGEAIWGQRRGY*GKGIDL
Trigger: CAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTG...TCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTTCTCCTCAGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CAA 90 bp TCTGAGGAGAAACACATAATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGCTTTCCTTTGCGCATaGTTTCTTCCTTCTCACTCC +
Preference number: 5 (lower is better)
Translates to: SEEKHIMYDYKGEAIWGKAFLCA*FLPSHS
Trigger: GGAGTGAGAAGGAAGAAACAATGCGCAAAGGAAAGC...CTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTTCTCCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
CDS-3UTR CAA 90 bp AGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGTGTTTTATGTCGCCAATTTGTATaGATCCTTGCAGAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: RLFGERYRSVQDYLASVLCRQFV*ILAEEE
Trigger: CTCCTCTTCTGCAAGGATCAATACAAATTGGCGACA...TAAAACACTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649235.1
CDS-3UTR CAA 90 bp AAACACATAATGTACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTTTCTTTTCCACTTGTaGTGTAAGGCCTCCAAACCC +
Preference number: 5 (lower is better)
Translates to: KHIMYDYKGEAIWGKVSIFLFHL*CKASKP
Trigger: GGGTTTGGAGGCCTTACACAACAAGTGGAAAAGAAA...GATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTACATTATGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1
CDS-3UTR CAA 90 bp AAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTACTTGGCAAGAAATGCCACGCTTTATaGTCATTTCTGAGTTTTCAC +
Preference number: 5 (lower is better)
Translates to: KGEAIWGKVSICAGLLGKKCHAL*SFLSFH
Trigger: GTGAAAACTCAGAAATGACAATAAAGCGTGGCATTT...CTTGCCAAGTAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265968.9
ENST00000533783.2
CDS-3UTR CAA 90 bp TACGACTACAAAGGAGAGGCTATTTGGGGAAAGGTATCGATCTGTGCAGGATTAAAATGCCACGCTTTATaGTCATTTCTGAGTTTTCAC +
Preference number: 5 (lower is better)
Translates to: YDYKGEAIWGKVSICAGLKCHAL*SFLSFH
Trigger: GTGAAAACTCAGAAATGACAATAAAGCGTGGCATTT...TAATCCTGCACAGATCGATACCTTTCCCCAAATAGCCTCTCCTTTGTAGTCGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265968.9
ENST00000533783.2
CDS-3UTR CAA 90 bp TTATTGTCATTTCTGAGTTTTCACGAGATGTGTAACATTACAAAGCCCCACGATTTTCTTTTCCACTTGTaGTGTAAGGCCTCCAAACCC +
Preference number: 5 (lower is better)
Translates to: LLSFLSFHEMCNITKPHDFLFHL*CKASKP
Trigger: GGGTTTGGAGGCCTTACACAACAAGTGGAAAAGAAA...ATCGTGGGGCTTTGTAATGTTACACATCTCGTGAAAACTCAGAAATGACAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000265968.9
ENST00000533783.2
CDS CAA 90 bp CAGGCCGAGATGCTCGCCCGTGTCTGTGCTGAGACAGCCAGCGCCTaGTCCATACCCGATCCCTTTGGGGCCATATCTGCGCCCATAGCA +
Preference number: 6 (lower is better)
Translates to: QAEMLARVCAETASA*SIPDPFGAISAPIA
Trigger: TGCTATGGGCGCAGATATGGCCCCAAAGGGATCGGGTATGGACAAGGCGCTGGCTGTCTCAGCACAGACACGGGCGAGCATCTCGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000649235.1
CDS TCA 72 bp GGAACTGCAGGCCGAGATGCTCGCCCGTGTCTGTGCTaGGACAGCCAGCGCCTTGTCCATACCCGATCCCTT +
Preference number: 6 (lower is better)
Translates to: GTAGRDARPCLC*DSQRLVHTRSL
Trigger: AAGGGATCGGGTATGGACAAGGCGCTGGCTGTCTCAGCACAGACACGGGCGAGCATCTCGGCCTGCAGTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000649235.1
CDS GCA 72 bp GGTCTTGTGCCAAGGTGTTGGAACTGCAGGCCGAGATaGTCGCCCGTGTCTGTGCTGAGACAGCCAGCGCCT +
Preference number: 6 (lower is better)
Translates to: GLVPRCWNCRPR*SPVSVLRQPAP
Trigger: AGGCGCTGGCTGTCTCAGCACAGACACGGGCGAGCATCTCGGCCTGCAGTTCCAACACCTTGGCACAAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647990.1
CDS CAA 72 bp ATGCTCGCCCGTGTCTGTGCTGAGACAGCCAGCGCCTaGTCCATACCCGATCCCTTTGGGGCCATATCTGCG +
Preference number: 6 (lower is better)
Translates to: MLARVCAETASA*SIPDPFGAISA
Trigger: CGCAGATATGGCCCCAAAGGGATCGGGTATGGACAAGGCGCTGGCTGTCTCAGCACAGACACGGGCGAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000649235.1
CDS GCA 72 bp TCCCTTTGGGGCCATATCTGCGCCCATAGCACACCTTaGAGTAGATCTCCGACTCATGAGCCGCGACTGTCG +
Preference number: 6 (lower is better)
Translates to: SLWGHICAHSTP*SRSPTHEPRLS
Trigger: CGACAGTCGCGGCTCATGAGTCGGAGATCTACTGCAAGGTGTGCTATGGGCGCAGATATGGCCCCAAAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000649235.1
CDS CAA 90 bp CCACATCGAGGGCACTTCTCGGACTCTCCAAACTTCGCAGTGAATTaGGAAGGGTTGCTGGTGGTAACTGAGCGTGCCGGCTTTGGGGAC +
Preference number: 6 (lower is better)
Translates to: PHRGHFSDSPNFAVN*EGLLVVTERAGFGD
Trigger: GTCCCCAAAGCCGGCACGCTCAGTTACCACCAGCAACCCTTCCAAATTCACTGCGAAGTTTGGAGAGTCCGAGAAGTGCCCTCGATGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
ENST00000649842.1
CDS CAA 90 bp GGGCACTTCTCGGACTCTCCAAACTTCGCAGTGAATTTGGAAGGGTaGCTGGTGGTAACTGAGCGTGCCGGCTTTGGGGACTGCAGTGGA +
Preference number: 6 (lower is better)
Translates to: GHFSDSPNFAVNLEG*LVVTERAGFGDCSG
Trigger: TCCACTGCAGTCCCCAAAGCCGGCACGCTCAGTTACCACCAGCAACCCTTCCAAATTCACTGCGAAGTTTGGAGAGTCCGAGAAGTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649842.1
CDS GCA 72 bp CGCCTTGTCCATACCCGATCCCTTTGGGGCCATATCTaGGCCCATAGCACACCTTGCAGTAGATCTCCGACT +
Preference number: 6 (lower is better)
Translates to: RLVHTRSLWGHI*AHSTPCSRSPT
Trigger: AGTCGGAGATCTACTGCAAGGTGTGCTATGGGCGCAGATATGGCCCCAAAGGGATCGGGTATGGACAAGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000649235.1
CDS CCA 72 bp GCGCCTCCGCCCCAGTTTGGCATCTTGAAGACTATCTaGTCAAGGTCAAGTCTGCCTGTGTGGACTCCGTTC +
Preference number: 6 (lower is better)
Translates to: APPPQFGILKTI*SRSSLPVWTPF
Trigger: GAACGGAGTCCACACAGGCAGACTTGACCTTGACCAGATAGTCTTCAAGATGCCAAACTGGGGCGGAGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649842.1
CDS CAA 72 bp GGGCACTTCTCGGACTCTCCAAACTTCGCAGTGAATTaGGAAGGGTTGCTGGTGGTAACTGAGCGTGCCGGC +
Preference number: 6 (lower is better)
Translates to: GHFSDSPNFAVN*EGLLVVTERAG
Trigger: GCCGGCACGCTCAGTTACCACCAGCAACCCTTCCAAATTCACTGCGAAGTTTGGAGAGTCCGAGAAGTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
ENST00000649842.1
CDS CAA 90 bp GGGCACTTCTCGGACTCTCCAAACTTCGCAGTGAATTTGGAAGGGTaGCTGGTGGTAACTGAGCGTGCCGGCTTTGGGGACTGTTGGAAC +
Preference number: 6 (lower is better)
Translates to: GHFSDSPNFAVNLEG*LVVTERAGFGDCWN
Trigger: GTTCCAACAGTCCCCAAAGCCGGCACGCTCAGTTACCACCAGCAACCCTTCCAAATTCACTGCGAAGTTTGGAGAGTCCGAGAAGTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
CDS TCA 72 bp CTTCGCAGTGAATTTGGAAGGGTTGCTGGTGGTAACTaGGCGTGCCGGCTTTGGGGACTGTTGGAACTGCAG +
Preference number: 6 (lower is better)
Translates to: LRSEFGRVAGGN*ACRLWGLLELQ
Trigger: CTGCAGTTCCAACAGTCCCCAAAGCCGGCACGCTCAGTTACCACCAGCAACCCTTCCAAATTCACTGCGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
CDS TCA 72 bp CTTCGCAGTGAATTTGGAAGGGTTGCTGGTGGTAACTaGGCGTGCCGGCTTTGGGGACTGCAGTGGAAACAC +
Preference number: 6 (lower is better)
Translates to: LRSEFGRVAGGN*ACRLWGLQWKH
Trigger: GTGTTTCCACTGCAGTCCCCAAAGCCGGCACGCTCAGTTACCACCAGCAACCCTTCCAAATTCACTGCGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649842.1
CDS CAA 72 bp TCGGACTCTCCAAACTTCGCAGTGAATTTGGAAGGGTaGCTGGTGGTAACTGAGCGTGCCGGCTTTGGGGAC +
Preference number: 6 (lower is better)
Translates to: SDSPNFAVNLEG*LVVTERAGFGD
Trigger: GTCCCCAAAGCCGGCACGCTCAGTTACCACCAGCAACCCTTCCAAATTCACTGCGAAGTTTGGAGAGTCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000649235.1
ENST00000649842.1
CDS TCA 72 bp CTCCACATTTTGCGCCTCCGCCCCAGTTTGGCATCTTaGAGACTATCTGGTCAAGGTCAAGTCTGCCTGTGT +
Preference number: 6 (lower is better)
Translates to: LHILRLRPSLAS*RLSGQGQVCLC
Trigger: ACACAGGCAGACTTGACCTTGACCAGATAGTCTTCAAGATGCCAAACTGGGGCGGAGGCGCAAAATGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649842.1
CDS CCA 72 bp TTCACAGGCTCCACATTTTGCGCCTCCGCCCCAGTTTaGCATCTTGAAGACTATCTGGTCAAGGTCAAGTCT +
Preference number: 6 (lower is better)
Translates to: FTGSTFCASAPV*HLEDYLVKVKS
Trigger: AGACTTGACCTTGACCAGATAGTCTTCAAGATGCCAAACTGGGGCGGAGGCGCAAAATGTGGAGCCTGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649842.1
CDS CCA 72 bp GCCTTCCTGCAGGCCATGCAGTGGAAACACGTCTTGTaGAAACTCCTTCCATTGCACTGGATTTCTTCTGCA +
Preference number: 6 (lower is better)
Translates to: AFLQAMQWKHVL*KLLPLHWISSA
Trigger: TGCAGAAGAAATCCAGTGCAATGGAAGGAGTTTCCACAAGACGTGTTTCCACTGCATGGCCTGCAGGAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000649235.1
CDS CCA 72 bp TGCCGGCTTTGGGGACTGCAGTGGAAACACGTCTTGTaGAAACTCCTTCCATTGCACTGGATTTCTTCTGCA +
Preference number: 6 (lower is better)
Translates to: CRLWGLQWKHVL*KLLPLHWISSA
Trigger: TGCAGAAGAAATCCAGTGCAATGGAAGGAGTTTCCACAAGACGTGTTTCCACTGCAGTCCCCAAAGCCGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649842.1
CDS TCA 72 bp CTCCACATTTTGCGCCTCCGCCCCAGTTTGGCATCTTaGAGACTATCTGGTCAAGGTCAAGTAGTTTGGAAA +
Preference number: 6 (lower is better)
Translates to: LHILRLRPSLAS*RLSGQGQVVWK
Trigger: TTTCCAAACTACTTGACCTTGACCAGATAGTCTTCAAGATGCCAAACTGGGGCGGAGGCGCAAAATGTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649235.1
CDS CCA 72 bp AGGTCTTGTGCCAAGGTGCAGTGGAAACACGTCTTGTaGAAACTCCTTCCATTGCACTGGATTTCTTCTGCA +
Preference number: 6 (lower is better)
Translates to: RSCAKVQWKHVL*KLLPLHWISSA
Trigger: TGCAGAAGAAATCCAGTGCAATGGAAGGAGTTTCCACAAGACGTGTTTCCACTGCACCTTGGCACAAGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648719.1
CDS GCA 72 bp CTTGTGGAAACTCCTTCCATTGCACTGGATTTCTTCTaGATGGTAGACGGTCTTTTCACAGGCTCCACATTT +
Preference number: 6 (lower is better)
Translates to: LVETPSIALDFF*MVDGLFTGSTF
Trigger: AAATGTGGAGCCTGTGAAAAGACCGTCTACCATGCAGAAGAAATCCAGTGCAATGGAAGGAGTTTCCACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265968.9
ENST00000533783.2
ENST00000647990.1
ENST00000648719.1
ENST00000649235.1
ENST00000649842.1